Query 023079
Match_columns 287
No_of_seqs 115 out of 1246
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 16:00:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023079.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023079hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dme_A Conserved exported prot 100.0 2E-35 6.8E-40 268.2 24.5 256 4-286 110-368 (369)
2 3nyc_A D-arginine dehydrogenas 100.0 3.5E-33 1.2E-37 254.9 22.1 241 4-286 112-356 (381)
3 1y56_B Sarcosine oxidase; dehy 100.0 6.8E-31 2.3E-35 240.5 22.7 239 4-286 107-353 (382)
4 2gf3_A MSOX, monomeric sarcosi 100.0 2.9E-30 1E-34 236.5 19.6 244 4-286 108-362 (389)
5 2uzz_A N-methyl-L-tryptophan o 100.0 5.2E-30 1.8E-34 233.7 19.1 240 4-286 107-355 (372)
6 2oln_A NIKD protein; flavoprot 100.0 1E-28 3.5E-33 227.4 22.0 246 5-286 112-372 (397)
7 1ryi_A Glycine oxidase; flavop 100.0 2.8E-28 9.7E-33 223.0 19.9 229 12-286 130-360 (382)
8 2gag_B Heterotetrameric sarcos 100.0 3.5E-28 1.2E-32 223.9 20.0 238 4-286 127-373 (405)
9 3axb_A Putative oxidoreductase 100.0 3E-28 1E-32 228.0 17.7 240 4-286 127-416 (448)
10 3dje_A Fructosyl amine: oxygen 100.0 9E-28 3.1E-32 224.0 16.6 245 7-286 117-382 (438)
11 3da1_A Glycerol-3-phosphate de 99.9 2.1E-26 7.3E-31 221.7 22.9 241 11-286 135-389 (561)
12 3pvc_A TRNA 5-methylaminomethy 99.9 2.4E-27 8.2E-32 233.5 16.6 235 7-286 373-647 (689)
13 3ps9_A TRNA 5-methylaminomethy 99.9 6.7E-27 2.3E-31 229.8 18.8 232 7-286 378-643 (676)
14 2rgh_A Alpha-glycerophosphate 99.9 8.1E-26 2.8E-30 218.1 24.7 247 6-286 149-409 (571)
15 1pj5_A N,N-dimethylglycine oxi 99.9 5.1E-26 1.7E-30 228.3 22.1 250 4-286 109-377 (830)
16 3g3e_A D-amino-acid oxidase; F 99.9 8.6E-27 2.9E-31 211.3 12.9 223 4-286 107-331 (351)
17 3c4n_A Uncharacterized protein 99.9 1.6E-26 5.3E-31 214.1 14.7 233 14-286 135-395 (405)
18 2qcu_A Aerobic glycerol-3-phos 99.9 2.9E-25 1E-29 211.0 20.5 241 12-286 114-370 (501)
19 1c0p_A D-amino acid oxidase; a 99.9 5E-25 1.7E-29 200.5 12.9 218 5-286 111-355 (363)
20 3cgv_A Geranylgeranyl reductas 99.0 2.8E-09 9.6E-14 96.9 13.0 212 38-286 96-312 (397)
21 3nix_A Flavoprotein/dehydrogen 98.8 9.4E-08 3.2E-12 87.7 14.2 72 37-122 99-172 (421)
22 3ka7_A Oxidoreductase; structu 98.7 1.9E-07 6.7E-12 85.7 14.8 69 30-117 185-254 (425)
23 2weu_A Tryptophan 5-halogenase 98.6 4E-07 1.4E-11 86.0 14.0 205 36-286 165-373 (511)
24 3nrn_A Uncharacterized protein 98.5 1.1E-06 3.8E-11 80.8 12.1 71 30-122 178-248 (421)
25 3i3l_A Alkylhalidase CMLS; fla 98.4 1.1E-06 3.6E-11 84.9 9.5 73 36-122 120-194 (591)
26 3atr_A Conserved archaeal prot 98.3 2.3E-05 8E-10 72.7 16.8 70 39-122 95-168 (453)
27 3fmw_A Oxygenase; mithramycin, 98.3 1E-05 3.5E-10 77.7 14.0 74 38-127 142-217 (570)
28 3oz2_A Digeranylgeranylglycero 98.3 1.4E-05 4.7E-10 71.9 13.9 209 40-285 98-311 (397)
29 2e4g_A Tryptophan halogenase; 98.2 2.1E-05 7.1E-10 75.1 14.4 71 36-122 186-259 (550)
30 2qa2_A CABE, polyketide oxygen 98.2 6.9E-05 2.3E-09 70.7 17.4 75 38-126 101-175 (499)
31 2qa1_A PGAE, polyketide oxygen 98.1 9.2E-05 3.2E-09 69.8 16.8 75 38-126 100-174 (500)
32 2aqj_A Tryptophan halogenase, 98.1 4.1E-05 1.4E-09 72.7 13.8 73 34-122 155-229 (538)
33 3ihg_A RDME; flavoenzyme, anth 98.1 7.8E-05 2.7E-09 70.7 15.4 75 38-126 114-192 (535)
34 3v76_A Flavoprotein; structura 98.0 1.4E-05 4.9E-10 73.7 8.8 67 41-123 129-205 (417)
35 3i6d_A Protoporphyrinogen oxid 97.9 0.00013 4.4E-09 67.4 13.7 55 44-115 235-289 (470)
36 2gmh_A Electron transfer flavo 97.9 0.00025 8.6E-09 68.1 15.9 79 38-122 138-227 (584)
37 2i0z_A NAD(FAD)-utilizing dehy 97.9 4.5E-05 1.5E-09 70.8 9.9 67 42-123 132-209 (447)
38 4dgk_A Phytoene dehydrogenase; 97.9 3.1E-05 1.1E-09 72.5 8.8 68 31-116 211-279 (501)
39 2gqf_A Hypothetical protein HI 97.9 2.7E-05 9.1E-10 71.5 8.0 66 42-123 107-186 (401)
40 3rp8_A Flavoprotein monooxygen 97.8 0.00011 3.7E-09 67.0 10.9 67 36-119 119-185 (407)
41 3lov_A Protoporphyrinogen oxid 97.8 0.00014 4.9E-09 67.6 11.8 54 44-115 236-289 (475)
42 3nlc_A Uncharacterized protein 97.7 9.3E-05 3.2E-09 70.6 9.2 68 36-118 212-280 (549)
43 2x3n_A Probable FAD-dependent 97.7 9E-05 3.1E-09 67.3 8.6 68 39-122 102-172 (399)
44 2ywl_A Thioredoxin reductase r 97.7 0.00013 4.6E-09 58.6 8.7 64 41-122 53-116 (180)
45 1d5t_A Guanine nucleotide diss 97.6 4.9E-05 1.7E-09 70.3 4.7 67 33-118 226-293 (433)
46 2bcg_G Secretory pathway GDP d 97.6 7.4E-05 2.5E-09 69.5 5.9 67 33-118 234-303 (453)
47 2bs2_A Quinol-fumarate reducta 97.5 0.00022 7.6E-09 69.5 8.7 95 8-117 121-222 (660)
48 1qo8_A Flavocytochrome C3 fuma 97.5 0.0002 6.8E-09 68.5 8.2 72 33-117 239-314 (566)
49 1y0p_A Fumarate reductase flav 97.5 0.00033 1.1E-08 67.0 9.2 71 33-116 244-318 (571)
50 3nks_A Protoporphyrinogen oxid 97.5 9E-05 3.1E-09 68.9 4.9 66 32-116 225-291 (477)
51 4a9w_A Monooxygenase; baeyer-v 97.4 0.0003 1E-08 62.2 7.8 62 40-117 72-134 (357)
52 3p1w_A Rabgdi protein; GDI RAB 97.4 0.00017 5.7E-09 67.6 6.3 65 32-114 247-313 (475)
53 3d1c_A Flavin-containing putat 97.4 0.00039 1.3E-08 62.0 8.1 61 40-116 84-144 (369)
54 3e1t_A Halogenase; flavoprotei 97.4 0.00059 2E-08 64.3 9.6 71 38-122 105-178 (512)
55 1d4d_A Flavocytochrome C fumar 97.3 0.00069 2.4E-08 64.9 9.3 70 34-116 245-318 (572)
56 2cul_A Glucose-inhibited divis 97.3 0.00079 2.7E-08 56.6 8.4 61 42-118 66-128 (232)
57 4at0_A 3-ketosteroid-delta4-5a 97.2 0.00047 1.6E-08 65.0 6.8 64 41-116 198-265 (510)
58 2pyx_A Tryptophan halogenase; 97.2 0.001 3.5E-08 62.9 8.9 70 37-122 168-240 (526)
59 2vvm_A Monoamine oxidase N; FA 97.2 0.00072 2.5E-08 63.1 7.6 59 43-116 254-313 (495)
60 3alj_A 2-methyl-3-hydroxypyrid 97.1 0.0014 4.9E-08 58.9 8.9 66 38-122 101-166 (379)
61 1rp0_A ARA6, thiazole biosynth 97.1 0.0024 8.1E-08 55.4 9.3 83 42-139 117-216 (284)
62 2v3a_A Rubredoxin reductase; a 97.0 0.0016 5.4E-08 58.9 7.8 65 43-122 186-251 (384)
63 1k0i_A P-hydroxybenzoate hydro 97.0 0.0023 7.9E-08 57.7 8.9 68 41-122 100-169 (394)
64 2zbw_A Thioredoxin reductase; 97.0 0.0023 7.7E-08 56.2 8.3 61 40-115 61-121 (335)
65 2q0l_A TRXR, thioredoxin reduc 96.8 0.0031 1.1E-07 54.7 7.9 61 40-116 55-115 (311)
66 3lzw_A Ferredoxin--NADP reduct 96.8 0.0027 9.1E-08 55.4 7.4 90 5-114 27-122 (332)
67 3iwa_A FAD-dependent pyridine 96.7 0.0043 1.5E-07 57.6 8.8 64 44-122 202-266 (472)
68 3ab1_A Ferredoxin--NADP reduct 96.7 0.0045 1.5E-07 55.1 8.6 61 40-115 70-131 (360)
69 3ces_A MNMG, tRNA uridine 5-ca 96.7 0.0033 1.1E-07 60.9 7.9 60 40-115 120-181 (651)
70 3fbs_A Oxidoreductase; structu 96.7 0.004 1.4E-07 53.4 7.8 91 4-115 21-112 (297)
71 3fg2_P Putative rubredoxin red 96.7 0.0041 1.4E-07 56.6 8.2 65 43-122 183-249 (404)
72 3cp8_A TRNA uridine 5-carboxym 96.7 0.0053 1.8E-07 59.3 9.1 61 40-116 113-175 (641)
73 2zxi_A TRNA uridine 5-carboxym 96.7 0.005 1.7E-07 59.4 8.9 60 40-115 119-180 (637)
74 1mo9_A ORF3; nucleotide bindin 96.7 0.0039 1.3E-07 58.9 8.1 66 43-122 254-325 (523)
75 2wdq_A Succinate dehydrogenase 96.7 0.0054 1.8E-07 58.9 9.0 63 42-117 141-208 (588)
76 3f8d_A Thioredoxin reductase ( 96.7 0.0035 1.2E-07 54.4 7.1 60 40-115 66-125 (323)
77 3lxd_A FAD-dependent pyridine 96.7 0.0048 1.6E-07 56.3 8.2 65 43-122 193-259 (415)
78 3gwf_A Cyclohexanone monooxyge 96.7 0.005 1.7E-07 58.5 8.6 64 39-117 82-149 (540)
79 1xdi_A RV3303C-LPDA; reductase 96.6 0.0035 1.2E-07 58.8 7.2 59 44-117 223-281 (499)
80 2xve_A Flavin-containing monoo 96.6 0.0041 1.4E-07 57.9 7.6 70 39-118 96-169 (464)
81 1vdc_A NTR, NADPH dependent th 96.6 0.0028 9.4E-08 55.6 6.1 59 41-116 67-125 (333)
82 1zk7_A HGII, reductase, mercur 96.6 0.0036 1.2E-07 58.1 7.1 59 43-117 215-273 (467)
83 2gv8_A Monooxygenase; FMO, FAD 96.6 0.0035 1.2E-07 57.9 6.9 65 41-117 112-179 (447)
84 2h88_A Succinate dehydrogenase 96.6 0.0061 2.1E-07 58.9 8.6 63 42-117 153-219 (621)
85 3qj4_A Renalase; FAD/NAD(P)-bi 96.5 0.0051 1.7E-07 54.4 7.2 51 45-113 113-163 (342)
86 2e5v_A L-aspartate oxidase; ar 96.5 0.0028 9.6E-08 59.1 5.7 60 41-117 116-178 (472)
87 2dkh_A 3-hydroxybenzoate hydro 96.5 0.012 4.1E-07 57.0 10.2 70 39-122 136-217 (639)
88 2vou_A 2,6-dihydroxypyridine h 96.5 0.0079 2.7E-07 54.4 8.3 64 41-122 96-159 (397)
89 3ef6_A Toluene 1,2-dioxygenase 96.4 0.0063 2.2E-07 55.5 7.6 64 44-122 185-249 (410)
90 2r0c_A REBC; flavin adenine di 96.4 0.016 5.6E-07 55.0 10.6 69 40-122 134-202 (549)
91 2xdo_A TETX2 protein; tetracyc 96.4 0.004 1.4E-07 56.4 6.1 60 40-116 124-183 (398)
92 2yqu_A 2-oxoglutarate dehydrog 96.4 0.007 2.4E-07 55.9 7.7 59 44-117 208-266 (455)
93 3o0h_A Glutathione reductase; 96.4 0.0076 2.6E-07 56.2 8.0 59 44-117 232-290 (484)
94 1fl2_A Alkyl hydroperoxide red 96.4 0.0065 2.2E-07 52.6 7.0 61 40-115 52-115 (310)
95 1b37_A Protein (polyamine oxid 96.3 0.0026 8.8E-08 59.1 4.4 57 44-115 206-270 (472)
96 3cty_A Thioredoxin reductase; 96.3 0.0088 3E-07 52.1 7.6 60 40-116 68-127 (319)
97 4ap3_A Steroid monooxygenase; 96.3 0.008 2.7E-07 57.2 7.8 63 40-117 95-161 (549)
98 3oc4_A Oxidoreductase, pyridin 96.3 0.0079 2.7E-07 55.6 7.3 58 43-116 188-245 (452)
99 2ivd_A PPO, PPOX, protoporphyr 96.3 0.0029 9.8E-08 58.6 4.2 65 31-116 228-295 (478)
100 3c96_A Flavin-containing monoo 96.2 0.0089 3E-07 54.3 7.3 69 39-122 102-175 (410)
101 2bry_A NEDD9 interacting prote 96.2 0.0074 2.5E-07 56.7 6.9 65 40-117 162-232 (497)
102 1yvv_A Amine oxidase, flavin-c 96.2 0.0054 1.9E-07 53.7 5.7 45 58-116 119-163 (336)
103 1m6i_A Programmed cell death p 96.2 0.013 4.3E-07 54.9 8.1 65 43-122 225-290 (493)
104 4dna_A Probable glutathione re 96.1 0.0086 2.9E-07 55.5 6.7 58 44-117 211-270 (463)
105 1kf6_A Fumarate reductase flav 96.1 0.015 5.2E-07 55.9 8.3 62 43-117 133-199 (602)
106 3k7m_X 6-hydroxy-L-nicotine ox 96.1 0.0058 2E-07 55.7 5.1 51 49-115 208-259 (431)
107 1q1r_A Putidaredoxin reductase 96.0 0.017 5.6E-07 53.1 7.9 64 44-122 191-258 (431)
108 1s3e_A Amine oxidase [flavin-c 96.0 0.01 3.4E-07 55.8 6.4 54 44-115 215-268 (520)
109 1fec_A Trypanothione reductase 96.0 0.012 4.1E-07 55.0 6.9 59 44-117 231-290 (490)
110 3itj_A Thioredoxin reductase 1 96.0 0.016 5.4E-07 50.5 7.3 63 40-115 80-142 (338)
111 2q7v_A Thioredoxin reductase; 95.9 0.015 5.3E-07 50.7 7.1 59 41-115 62-123 (325)
112 2yg5_A Putrescine oxidase; oxi 95.9 0.0099 3.4E-07 54.5 5.9 52 45-115 216-268 (453)
113 1w4x_A Phenylacetone monooxyge 95.9 0.021 7.1E-07 54.1 8.2 63 40-117 90-156 (542)
114 3uox_A Otemo; baeyer-villiger 95.9 0.015 5.1E-07 55.3 7.1 65 39-118 82-150 (545)
115 1hyu_A AHPF, alkyl hydroperoxi 95.8 0.017 5.8E-07 54.5 7.1 62 40-116 263-327 (521)
116 1vg0_A RAB proteins geranylger 95.7 0.023 7.8E-07 55.0 7.7 63 32-112 369-434 (650)
117 2r9z_A Glutathione amide reduc 95.7 0.033 1.1E-06 51.6 8.6 59 45-117 208-266 (463)
118 2a87_A TRXR, TR, thioredoxin r 95.7 0.02 7E-07 50.2 6.9 58 41-115 68-126 (335)
119 1ges_A Glutathione reductase; 95.7 0.029 9.9E-07 51.7 8.1 58 45-117 209-267 (450)
120 1chu_A Protein (L-aspartate ox 95.6 0.012 4.3E-07 55.7 5.6 63 42-117 136-210 (540)
121 1jnr_A Adenylylsulfate reducta 95.6 0.018 6.2E-07 55.8 6.7 64 41-117 148-220 (643)
122 2wpf_A Trypanothione reductase 95.6 0.036 1.2E-06 51.8 8.4 58 45-117 236-294 (495)
123 1pn0_A Phenol 2-monooxygenase; 95.5 0.41 1.4E-05 46.4 16.1 82 40-122 115-236 (665)
124 3ntd_A FAD-dependent pyridine 95.5 0.044 1.5E-06 51.9 8.8 64 44-122 192-275 (565)
125 1trb_A Thioredoxin reductase; 95.5 0.028 9.6E-07 48.7 6.9 58 41-115 59-116 (320)
126 2gqw_A Ferredoxin reductase; f 95.4 0.037 1.3E-06 50.3 7.9 61 43-122 186-247 (408)
127 1trb_A Thioredoxin reductase; 95.4 0.055 1.9E-06 46.8 8.7 65 43-116 183-248 (320)
128 2hqm_A GR, grase, glutathione 95.4 0.037 1.3E-06 51.4 7.9 60 44-117 226-287 (479)
129 2b9w_A Putative aminooxidase; 95.2 0.02 6.9E-07 51.9 5.4 44 55-114 214-257 (424)
130 2eq6_A Pyruvate dehydrogenase 95.2 0.076 2.6E-06 49.1 9.2 61 44-117 210-273 (464)
131 2qae_A Lipoamide, dihydrolipoy 95.2 0.043 1.5E-06 50.7 7.5 61 44-117 215-278 (468)
132 2jbv_A Choline oxidase; alcoho 95.2 0.015 5.2E-07 55.2 4.5 66 47-122 211-281 (546)
133 2cdu_A NADPH oxidase; flavoenz 95.1 0.057 1.9E-06 49.7 8.2 57 44-116 191-248 (452)
134 3cgb_A Pyridine nucleotide-dis 95.1 0.059 2E-06 50.0 8.3 63 44-122 227-290 (480)
135 3gyx_A Adenylylsulfate reducta 95.1 0.019 6.5E-07 55.9 5.0 64 40-116 162-234 (662)
136 1zmd_A Dihydrolipoyl dehydroge 95.1 0.057 2E-06 50.0 8.0 60 43-117 219-284 (474)
137 2jae_A L-amino acid oxidase; o 95.0 0.025 8.4E-07 52.5 5.3 66 32-114 230-295 (489)
138 1onf_A GR, grase, glutathione 94.9 0.071 2.4E-06 49.8 8.4 59 44-117 217-277 (500)
139 1y56_A Hypothetical protein PH 94.9 0.028 9.5E-07 52.6 5.5 56 52-122 265-321 (493)
140 3s5w_A L-ornithine 5-monooxyge 94.9 0.046 1.6E-06 50.2 7.0 59 44-113 127-190 (463)
141 3lad_A Dihydrolipoamide dehydr 94.8 0.059 2E-06 49.9 7.5 60 44-115 221-280 (476)
142 1kdg_A CDH, cellobiose dehydro 94.7 0.045 1.5E-06 51.7 6.5 65 48-122 199-269 (546)
143 1ebd_A E3BD, dihydrolipoamide 94.7 0.063 2.1E-06 49.4 7.3 60 44-116 211-271 (455)
144 1ojt_A Surface protein; redox- 94.7 0.048 1.7E-06 50.7 6.4 59 44-117 226-288 (482)
145 3urh_A Dihydrolipoyl dehydroge 94.7 0.082 2.8E-06 49.2 8.0 65 43-117 238-302 (491)
146 1n4w_A CHOD, cholesterol oxida 94.6 0.034 1.2E-06 52.2 5.3 65 48-122 225-296 (504)
147 3s5w_A L-ornithine 5-monooxyge 94.6 0.13 4.5E-06 47.1 9.1 50 57-116 329-378 (463)
148 1v59_A Dihydrolipoamide dehydr 94.5 0.088 3E-06 48.7 7.8 61 44-117 224-289 (478)
149 1nhp_A NADH peroxidase; oxidor 94.5 0.074 2.5E-06 48.8 7.1 57 44-116 191-247 (447)
150 2a8x_A Dihydrolipoyl dehydroge 94.5 0.082 2.8E-06 48.8 7.4 60 44-116 212-272 (464)
151 3klj_A NAD(FAD)-dependent dehy 94.4 0.018 6.3E-07 52.1 2.8 52 45-113 63-114 (385)
152 3h8l_A NADH oxidase; membrane 94.2 0.057 1.9E-06 48.9 5.7 60 44-122 218-277 (409)
153 1coy_A Cholesterol oxidase; ox 94.2 0.05 1.7E-06 51.1 5.3 65 48-122 230-301 (507)
154 4b1b_A TRXR, thioredoxin reduc 94.0 0.18 6.1E-06 47.8 8.8 56 44-114 263-318 (542)
155 1dxl_A Dihydrolipoamide dehydr 94.0 0.082 2.8E-06 48.8 6.4 60 44-116 218-280 (470)
156 4gut_A Lysine-specific histone 94.0 0.073 2.5E-06 52.7 6.2 42 57-113 542-583 (776)
157 3dgh_A TRXR-1, thioredoxin red 93.9 0.12 4.1E-06 47.9 7.4 62 44-115 227-289 (483)
158 1rsg_A FMS1 protein; FAD bindi 93.9 0.048 1.7E-06 51.1 4.6 57 43-116 201-258 (516)
159 2zbw_A Thioredoxin reductase; 93.9 0.21 7.3E-06 43.3 8.6 65 45-122 192-260 (335)
160 3jsk_A Cypbp37 protein; octame 93.8 0.2 6.9E-06 44.6 8.2 68 42-116 158-252 (344)
161 2iid_A L-amino-acid oxidase; f 93.7 0.087 3E-06 48.9 6.0 57 44-114 241-297 (498)
162 3ics_A Coenzyme A-disulfide re 93.6 0.16 5.4E-06 48.4 7.7 62 44-122 228-290 (588)
163 4g6h_A Rotenone-insensitive NA 93.6 0.09 3.1E-06 49.3 5.8 65 44-121 272-338 (502)
164 3dk9_A Grase, GR, glutathione 93.5 0.21 7E-06 46.2 8.2 63 44-116 228-294 (478)
165 4b63_A L-ornithine N5 monooxyg 93.5 0.13 4.4E-06 48.1 6.8 58 46-113 147-212 (501)
166 4fk1_A Putative thioredoxin re 93.5 0.18 6.2E-06 43.4 7.3 59 41-114 57-116 (304)
167 3f8d_A Thioredoxin reductase ( 93.3 0.24 8.1E-06 42.5 7.8 60 50-122 195-259 (323)
168 2bc0_A NADH oxidase; flavoprot 93.1 0.17 5.8E-06 47.0 6.9 56 44-116 236-292 (490)
169 1lvl_A Dihydrolipoamide dehydr 92.9 0.14 4.7E-06 47.2 5.8 58 44-116 212-269 (458)
170 3itj_A Thioredoxin reductase 1 92.8 0.22 7.5E-06 43.1 6.8 59 48-116 212-272 (338)
171 3r9u_A Thioredoxin reductase; 92.8 0.22 7.6E-06 42.6 6.7 58 40-114 58-117 (315)
172 3lzw_A Ferredoxin--NADP reduct 92.6 0.28 9.5E-06 42.3 7.3 55 51-115 196-250 (332)
173 2gjc_A Thiazole biosynthetic e 92.6 0.38 1.3E-05 42.5 8.1 32 42-73 144-176 (326)
174 3ab1_A Ferredoxin--NADP reduct 92.6 0.23 7.8E-06 43.8 6.7 64 45-121 203-270 (360)
175 3d1c_A Flavin-containing putat 92.5 0.31 1.1E-05 42.8 7.6 61 45-120 215-278 (369)
176 3sx6_A Sulfide-quinone reducta 92.3 0.089 3.1E-06 48.1 3.8 60 39-116 54-113 (437)
177 3cty_A Thioredoxin reductase; 92.2 0.37 1.3E-05 41.6 7.5 55 49-116 195-253 (319)
178 1fl2_A Alkyl hydroperoxide red 92.2 0.38 1.3E-05 41.2 7.6 56 50-115 185-242 (310)
179 4gde_A UDP-galactopyranose mut 92.0 0.098 3.4E-06 48.5 3.7 61 43-122 221-281 (513)
180 1ju2_A HydroxynitrIle lyase; f 91.9 0.085 2.9E-06 49.9 3.2 60 50-122 200-269 (536)
181 3ic9_A Dihydrolipoamide dehydr 91.7 0.44 1.5E-05 44.3 7.8 59 44-116 215-275 (492)
182 4a5l_A Thioredoxin reductase; 91.7 0.46 1.6E-05 40.7 7.5 58 41-114 63-120 (314)
183 3r9u_A Thioredoxin reductase; 91.7 0.46 1.6E-05 40.5 7.4 49 55-116 194-245 (315)
184 3oc4_A Oxidoreductase, pyridin 91.5 0.17 5.8E-06 46.5 4.7 51 50-114 64-114 (452)
185 3dgz_A Thioredoxin reductase 2 91.5 0.39 1.3E-05 44.5 7.3 62 44-115 225-287 (488)
186 1v59_A Dihydrolipoamide dehydr 91.0 0.29 9.8E-06 45.2 5.7 50 50-115 102-157 (478)
187 2z3y_A Lysine-specific histone 90.8 0.31 1.1E-05 47.2 6.0 48 58-114 410-457 (662)
188 1ebd_A E3BD, dihydrolipoamide 90.8 0.55 1.9E-05 43.0 7.4 50 49-115 96-145 (455)
189 1ojt_A Surface protein; redox- 90.7 0.32 1.1E-05 45.0 5.7 61 50-116 101-161 (482)
190 3k30_A Histamine dehydrogenase 90.5 0.16 5.5E-06 49.4 3.6 59 44-116 567-625 (690)
191 3vrd_B FCCB subunit, flavocyto 90.5 0.15 5.1E-06 45.8 3.2 54 54-122 212-265 (401)
192 1q1r_A Putidaredoxin reductase 90.5 0.4 1.4E-05 43.7 6.1 47 52-115 68-114 (431)
193 3kd9_A Coenzyme A disulfide re 90.4 0.46 1.6E-05 43.4 6.5 61 44-122 190-252 (449)
194 3hyw_A Sulfide-quinone reducta 90.4 0.042 1.4E-06 50.3 -0.6 44 53-114 65-108 (430)
195 2a8x_A Dihydrolipoyl dehydroge 90.4 0.38 1.3E-05 44.2 6.0 51 49-115 96-146 (464)
196 1xhc_A NADH oxidase /nitrite r 90.3 0.1 3.4E-06 46.8 1.8 47 50-114 66-112 (367)
197 3qvp_A Glucose oxidase; oxidor 90.3 0.61 2.1E-05 44.5 7.4 55 55-122 238-301 (583)
198 1xhc_A NADH oxidase /nitrite r 90.3 0.33 1.1E-05 43.3 5.3 59 44-122 183-242 (367)
199 1dxl_A Dihydrolipoamide dehydr 90.1 0.48 1.6E-05 43.5 6.4 50 50-115 102-151 (470)
200 2cdu_A NADPH oxidase; flavoenz 90.0 0.18 6E-06 46.3 3.3 60 43-114 57-116 (452)
201 3fbs_A Oxidoreductase; structu 89.8 0.46 1.6E-05 40.1 5.6 57 47-122 177-234 (297)
202 2q0l_A TRXR, thioredoxin reduc 89.6 1.2 4E-05 38.0 8.2 54 50-116 184-242 (311)
203 1nhp_A NADH peroxidase; oxidor 89.5 0.48 1.6E-05 43.3 5.8 51 51-114 63-114 (447)
204 4hb9_A Similarities with proba 89.4 0.84 2.9E-05 40.5 7.3 50 57-122 122-172 (412)
205 2bc0_A NADH oxidase; flavoprot 89.3 0.35 1.2E-05 44.9 4.8 50 51-114 99-148 (490)
206 2q7v_A Thioredoxin reductase; 89.2 1.2 4.2E-05 38.3 8.0 54 50-116 193-250 (325)
207 3hyw_A Sulfide-quinone reducta 88.8 1 3.4E-05 41.0 7.4 60 48-122 204-263 (430)
208 3ntd_A FAD-dependent pyridine 88.7 0.81 2.8E-05 43.0 6.9 48 54-114 68-116 (565)
209 3kd9_A Coenzyme A disulfide re 88.5 0.42 1.4E-05 43.7 4.7 57 42-114 56-113 (449)
210 3qfa_A Thioredoxin reductase 1 88.3 1.7 5.8E-05 40.6 8.8 60 44-115 250-315 (519)
211 3ics_A Coenzyme A-disulfide re 88.1 1.1 3.6E-05 42.6 7.3 51 50-113 99-150 (588)
212 3h8l_A NADH oxidase; membrane 87.9 0.77 2.7E-05 41.2 6.0 55 47-115 59-113 (409)
213 3iwa_A FAD-dependent pyridine 87.9 0.73 2.5E-05 42.4 5.9 47 54-113 76-123 (472)
214 1sez_A Protoporphyrinogen oxid 87.8 0.54 1.9E-05 43.4 5.0 58 44-115 243-308 (504)
215 3c4a_A Probable tryptophan hyd 87.7 0.21 7.2E-06 44.6 2.1 51 40-116 94-144 (381)
216 3cgb_A Pyridine nucleotide-dis 87.5 0.97 3.3E-05 41.7 6.5 47 55-114 104-151 (480)
217 3ef6_A Toluene 1,2-dioxygenase 87.4 0.73 2.5E-05 41.6 5.5 45 53-114 66-110 (410)
218 3h28_A Sulfide-quinone reducta 87.2 0.59 2E-05 42.4 4.8 61 46-121 202-262 (430)
219 2xag_A Lysine-specific histone 87.1 0.72 2.5E-05 46.1 5.7 48 58-114 581-628 (852)
220 1gpe_A Protein (glucose oxidas 87.0 0.56 1.9E-05 44.8 4.7 56 54-122 241-305 (587)
221 4eqs_A Coenzyme A disulfide re 86.8 0.89 3.1E-05 41.5 5.8 50 54-115 67-116 (437)
222 4dsg_A UDP-galactopyranose mut 86.8 0.42 1.4E-05 44.4 3.6 59 43-122 215-275 (484)
223 1vdc_A NTR, NADPH dependent th 86.3 1.4 4.7E-05 38.0 6.5 53 54-116 205-260 (333)
224 2gqw_A Ferredoxin reductase; f 85.8 0.51 1.8E-05 42.6 3.6 45 54-115 69-113 (408)
225 3l8k_A Dihydrolipoyl dehydroge 85.3 1.6 5.5E-05 40.0 6.7 46 59-117 226-274 (466)
226 2v3a_A Rubredoxin reductase; a 85.3 1 3.4E-05 40.2 5.2 55 42-114 57-112 (384)
227 2qae_A Lipoamide, dihydrolipoy 85.2 1.5 5.1E-05 40.2 6.5 49 50-114 99-147 (468)
228 1ps9_A 2,4-dienoyl-COA reducta 84.5 2.1 7.3E-05 41.3 7.5 52 49-116 578-629 (671)
229 4eqs_A Coenzyme A disulfide re 84.5 1.1 3.7E-05 40.9 5.2 54 44-116 188-241 (437)
230 1hyu_A AHPF, alkyl hydroperoxi 83.4 2.4 8.1E-05 39.6 7.1 55 50-114 396-452 (521)
231 1y56_A Hypothetical protein PH 83.3 0.78 2.7E-05 42.6 3.7 60 42-115 159-219 (493)
232 1zmd_A Dihydrolipoyl dehydroge 83.3 2.5 8.4E-05 38.8 7.1 48 51-114 104-151 (474)
233 3lxd_A FAD-dependent pyridine 83.2 1.4 4.9E-05 39.6 5.3 48 50-114 71-118 (415)
234 2a87_A TRXR, TR, thioredoxin r 82.8 1.8 6.1E-05 37.5 5.7 49 55-116 202-253 (335)
235 1m6i_A Programmed cell death p 82.3 0.88 3E-05 42.3 3.6 44 55-115 101-144 (493)
236 3h28_A Sulfide-quinone reducta 82.2 0.22 7.6E-06 45.3 -0.5 48 50-115 62-109 (430)
237 3uox_A Otemo; baeyer-villiger 82.0 1 3.5E-05 42.5 4.0 42 54-115 348-391 (545)
238 3fg2_P Putative rubredoxin red 81.4 2.3 7.9E-05 38.1 6.0 45 51-113 64-108 (404)
239 3vrd_B FCCB subunit, flavocyto 81.3 2.4 8.2E-05 37.7 6.1 44 54-115 65-108 (401)
240 1xdi_A RV3303C-LPDA; reductase 80.9 2 6.8E-05 39.8 5.5 51 50-114 101-155 (499)
241 3fim_B ARYL-alcohol oxidase; A 80.8 1.1 3.7E-05 42.6 3.7 63 49-122 212-284 (566)
242 3pl8_A Pyranose 2-oxidase; sub 80.7 3.2 0.00011 39.8 7.0 56 57-122 273-332 (623)
243 3ayj_A Pro-enzyme of L-phenyla 79.1 1.3 4.6E-05 43.2 3.8 65 33-114 339-413 (721)
244 3l8k_A Dihydrolipoyl dehydroge 79.0 2.7 9.1E-05 38.5 5.7 46 52-113 97-142 (466)
245 2yqu_A 2-oxoglutarate dehydrog 78.7 2.1 7.1E-05 39.1 4.8 45 51-114 96-140 (455)
246 2x8g_A Thioredoxin glutathione 78.5 6.6 0.00022 37.1 8.4 59 45-116 327-396 (598)
247 3sx6_A Sulfide-quinone reducta 78.3 3.6 0.00012 37.2 6.3 61 46-118 210-272 (437)
248 3urh_A Dihydrolipoyl dehydroge 76.9 6 0.00021 36.3 7.5 47 52-114 123-169 (491)
249 4evu_A Putative periplasmic pr 76.8 5.6 0.00019 26.6 5.2 65 7-80 2-67 (72)
250 1o94_A Tmadh, trimethylamine d 75.9 8 0.00027 37.7 8.3 67 48-116 575-647 (729)
251 2hqm_A GR, grase, glutathione 75.9 3.7 0.00013 37.7 5.7 49 50-114 111-159 (479)
252 3lad_A Dihydrolipoamide dehydr 74.6 4.4 0.00015 37.0 5.8 47 52-114 107-153 (476)
253 3q9t_A Choline dehydrogenase a 74.3 3.1 0.00011 39.5 4.8 55 55-122 217-278 (577)
254 2eq6_A Pyruvate dehydrogenase 74.1 4.2 0.00014 37.2 5.5 44 51-115 100-143 (464)
255 3gwf_A Cyclohexanone monooxyge 74.0 1.4 4.6E-05 41.6 2.2 43 56-117 342-386 (540)
256 1gte_A Dihydropyrimidine dehyd 72.1 4.6 0.00016 41.1 5.7 65 52-122 378-451 (1025)
257 3t37_A Probable dehydrogenase; 71.9 3.2 0.00011 38.4 4.3 53 56-122 223-279 (526)
258 4gcm_A TRXR, thioredoxin reduc 71.2 11 0.00038 31.9 7.3 58 40-114 58-115 (312)
259 3qfa_A Thioredoxin reductase 1 71.0 11 0.00037 35.0 7.7 46 53-114 139-184 (519)
260 4ap3_A Steroid monooxygenase; 70.1 2.1 7.3E-05 40.3 2.6 42 56-117 355-398 (549)
261 1lvl_A Dihydrolipoamide dehydr 68.7 7.9 0.00027 35.2 6.1 42 52-114 104-145 (458)
262 1zk7_A HGII, reductase, mercur 68.5 7 0.00024 35.6 5.7 45 54-114 104-149 (467)
263 4fk1_A Putative thioredoxin re 68.2 5.4 0.00019 33.9 4.6 59 48-122 184-244 (304)
264 3dgh_A TRXR-1, thioredoxin red 68.0 15 0.0005 33.6 7.8 44 54-114 118-161 (483)
265 3dgz_A Thioredoxin reductase 2 67.4 11 0.00038 34.5 6.8 45 53-113 113-157 (488)
266 1fec_A Trypanothione reductase 66.8 11 0.00037 34.7 6.6 48 52-114 111-162 (490)
267 1cjc_A Protein (adrenodoxin re 65.8 11 0.00038 34.4 6.4 59 57-117 270-335 (460)
268 4g6h_A Rotenone-insensitive NA 65.6 1.8 6.2E-05 40.3 1.1 76 39-115 89-169 (502)
269 1w4x_A Phenylacetone monooxyge 65.0 6 0.0002 37.0 4.5 44 57-120 351-397 (542)
270 2gag_A Heterotetrameric sarcos 65.0 9.1 0.00031 38.7 6.1 59 51-122 323-391 (965)
271 3dk9_A Grase, GR, glutathione 64.6 11 0.00037 34.5 6.1 46 50-114 114-159 (478)
272 1lqt_A FPRA; NADP+ derivative, 64.4 7.1 0.00024 35.7 4.8 66 48-117 250-328 (456)
273 2vdc_G Glutamate synthase [NAD 63.0 1.6 5.6E-05 40.1 0.2 50 43-116 171-220 (456)
274 4b1b_A TRXR, thioredoxin reduc 61.2 23 0.0008 33.1 7.8 49 52-114 148-196 (542)
275 2gag_A Heterotetrameric sarcos 59.4 15 0.0005 37.2 6.5 68 43-114 180-252 (965)
276 2vdc_G Glutamate synthase [NAD 58.9 4.6 0.00016 37.0 2.5 59 52-115 310-378 (456)
277 2r9z_A Glutathione amide reduc 57.6 18 0.00062 32.9 6.3 43 51-114 99-141 (463)
278 1onf_A GR, grase, glutathione 57.1 8.9 0.0003 35.4 4.1 48 50-115 95-153 (500)
279 2wpf_A Trypanothione reductase 56.0 12 0.00042 34.4 4.9 44 53-114 116-166 (495)
280 3klj_A NAD(FAD)-dependent dehy 53.5 3.3 0.00011 37.0 0.5 50 45-122 189-239 (385)
281 1ges_A Glutathione reductase; 47.3 36 0.0012 30.7 6.5 41 53-114 102-142 (450)
282 2x8g_A Thioredoxin glutathione 47.1 44 0.0015 31.3 7.3 45 54-114 216-260 (598)
283 3ihm_A Styrene monooxygenase A 45.2 7.4 0.00025 35.1 1.5 53 38-117 116-169 (430)
284 1cjc_A Protein (adrenodoxin re 43.9 3.6 0.00012 37.8 -0.9 48 44-115 59-106 (460)
285 1lqt_A FPRA; NADP+ derivative, 42.2 3.3 0.00011 38.0 -1.5 48 44-115 61-108 (456)
286 3o0h_A Glutathione reductase; 41.5 41 0.0014 30.6 5.9 47 49-115 119-166 (484)
287 4dna_A Probable glutathione re 40.7 32 0.0011 31.1 5.1 45 50-114 99-144 (463)
288 1mo9_A ORF3; nucleotide bindin 40.1 27 0.00092 32.3 4.5 39 55-113 146-184 (523)
289 4a9w_A Monooxygenase; baeyer-v 36.7 20 0.0007 30.4 2.9 45 56-120 246-291 (357)
290 2jna_A Putative secreted prote 36.3 87 0.003 22.4 5.7 64 12-80 22-87 (104)
291 2r4q_A Phosphotransferase syst 34.5 21 0.00072 25.7 2.2 57 37-116 12-70 (106)
292 2r48_A Phosphotransferase syst 34.0 22 0.00074 25.7 2.2 56 38-116 13-70 (106)
293 2xve_A Flavin-containing monoo 33.9 33 0.0011 31.1 4.0 16 101-116 262-277 (464)
294 2kyr_A Fructose-like phosphotr 31.9 18 0.00061 26.3 1.4 55 38-115 16-72 (111)
295 1gte_A Dihydropyrimidine dehyd 28.6 9.1 0.00031 38.9 -0.9 49 44-114 238-286 (1025)
296 2gv8_A Monooxygenase; FMO, FAD 27.6 47 0.0016 29.8 3.8 15 102-116 279-293 (447)
297 4b63_A L-ornithine N5 monooxyg 27.3 55 0.0019 30.0 4.3 16 101-116 395-410 (501)
298 1ps9_A 2,4-dienoyl-COA reducta 27.0 42 0.0014 32.1 3.6 41 43-113 424-465 (671)
299 4a5l_A Thioredoxin reductase; 25.3 1.9E+02 0.0065 23.7 7.2 48 55-114 199-249 (314)
300 2i9o_A MHB8A peptide; beta-hai 21.8 56 0.0019 17.8 1.9 29 258-286 7-35 (37)
No 1
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=100.00 E-value=2e-35 Score=268.22 Aligned_cols=256 Identities=49% Similarity=0.908 Sum_probs=214.5
Q ss_pred chhcCCCeeeeeCHHHHHhhCCCcccceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCe-EEEEec
Q 023079 4 GTANGVHGLRMLEGFEAMKMEPELQCVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNC-MNVYIS 82 (287)
Q Consensus 4 ~~~~g~~~~~~L~~~ei~~~~P~l~~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~-~~V~t~ 82 (287)
.+..|+++.++++.+++.+++|.+...+++|.|.+++++|..++.+|.+.++++|++|+++++|+++..++++ +.|++.
T Consensus 110 ~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~ 189 (369)
T 3dme_A 110 AGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFG 189 (369)
T ss_dssp HHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEEC
T ss_pred HHHcCCCceeecCHHHHHHhCCCceeeeeeECCCCEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEEC
Confidence 3456775589999999999999998889999999999999999999999999999999999999999988765 889888
Q ss_pred CCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHhCCCCCcccCCccccceEEEEEcCCCCCCCCceeeeCCCCC
Q 023079 83 ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRFIGLDNVFIPPAYYARGCYFSLANTKVAPFKHLIYPIPEDG 162 (287)
Q Consensus 83 ~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~ 162 (287)
+|. ..+++||+||+|+|+|+..|++++.+.+....+++++.||+++.++.+ ..+++.+|+.|...
T Consensus 190 ~g~-------------~~~~~a~~VV~A~G~~s~~l~~~~~g~~~~~~~~i~p~rG~~~~~~~~--~~~~~~~~~~p~~~ 254 (369)
T 3dme_A 190 GAE-------------PMTLSCRVLINAAGLHAPGLARRIEGIPRDSIPPEYLCKGSYFTLAGR--APFSRLIYPVPQHA 254 (369)
T ss_dssp TTS-------------CEEEEEEEEEECCGGGHHHHHHTEETSCGGGSCCCEEEEEEEEECSSS--CSCSSEEEECTTCS
T ss_pred CCc-------------eeEEEeCEEEECCCcchHHHHHHhcCCCccccceeeecceEEEEECCC--CccCceeecCCCCC
Confidence 772 237999999999999999999888223322223466699999998764 34667788888765
Q ss_pred CceeEEeeecCCcEEECCCccccCCcccccccccccccCCChhhHHHHHHHHhhhCCCCCCCCcccccccccceecCCCC
Q 023079 163 GLGVHVTLDLDGQIKFGPDVEWIDGIDDTLSFLNRFDYSVNANRAERFYPEIRKYYPDLRDGSLQPSYAGIRPKLSGPRQ 242 (287)
Q Consensus 163 ~~~~~~~~~~~g~l~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~i~~~~~G~r~~~~~~~~ 242 (287)
+.++++++..+|++++|++.++.+ ..+...+.+.++.+++.+.++||.+.+.++.+.|+|+||+..++++
T Consensus 255 ~~~~~~~~~~~g~~~iG~t~e~~~----------~~~~~~~~~~~~~l~~~~~~~~P~l~~~~v~~~w~G~Rp~~~~~~~ 324 (369)
T 3dme_A 255 GLGVHLTLDLGGQAKFGPDTEWIA----------TEDYTLDPRRADVFYAAVRSYWPALPDGALAPGYTGIRPKISGPHE 324 (369)
T ss_dssp SCCCCEEECTTSCEEECCCCEEES----------SCCCCCCGGGGGGHHHHHHTTCTTCCTTCCEEEEEEEEEESSCTTS
T ss_pred CceEEEeCccCCcEEECCCccccc----------ccccccCHHHHHHHHHHHHHHCCCCChhhceecceeccccccCCCC
Confidence 667888888899999999877532 2455667888999999999999999999999999999999764445
Q ss_pred CCCCeEE-ec-CCCCCCCCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 243 SPIDFVI-QG-DDTHGVPGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 243 ~~~~~~i-~~-~~~~~~~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
++++|+| |+ .+ ..+|+|+++|++|+|||++|++|++++++|.
T Consensus 325 ~d~~p~i~g~~~~--~~~~l~~~~G~~~~G~t~ap~~a~~~a~~i~ 368 (369)
T 3dme_A 325 PAADFAIAGPASH--GVAGLVNLYGIESPGLTASLAIAEETLARLA 368 (369)
T ss_dssp CCCCCEEECHHHH--CCTTEEEEECCCTTHHHHHHHHHHHHHHHHC
T ss_pred CcCCeEEeccccc--CCCCEEEEeCCCCchHhccHHHHHHHHHHhh
Confidence 6788888 76 34 4689999999999999999999999999985
No 2
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=100.00 E-value=3.5e-33 Score=254.93 Aligned_cols=241 Identities=17% Similarity=0.127 Sum_probs=195.4
Q ss_pred chhcCCCeeeeeCHHHHHhhCCCcc---cceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEE
Q 023079 4 GTANGVHGLRMLEGFEAMKMEPELQ---CVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVY 80 (287)
Q Consensus 4 ~~~~g~~~~~~L~~~ei~~~~P~l~---~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~ 80 (287)
.+..|++ +++++++++.+++|.+. ..+++|.|+++++||.+++.+|++.|+++|++|+++++|+++..++++|.|+
T Consensus 112 ~~~~g~~-~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~ 190 (381)
T 3nyc_A 112 GKALVPQ-MRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVR 190 (381)
T ss_dssp HHHHCTT-CEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEE
T ss_pred HHHcCCC-cEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEE
Confidence 4567887 99999999999999986 5689999999999999999999999999999999999999999988889999
Q ss_pred ecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHhCCCC-CcccCCccccceEEEEEcCCCCCCCCceeeeCC
Q 023079 81 ISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRFIGLD-NVFIPPAYYARGCYFSLANTKVAPFKHLIYPIP 159 (287)
Q Consensus 81 t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~~~~~-~~~~p~~~~~~g~~~~~~~~~~~~~~~~i~~~~ 159 (287)
|++| +++||+||+|+|+|+..|+++++ .. +++.| .+|+++.++.+....... ++..
T Consensus 191 t~~g----------------~i~a~~VV~A~G~~s~~l~~~~g-~~~~~~~p----~rg~~~~~~~~~~~~~~~--~p~~ 247 (381)
T 3nyc_A 191 CDAG----------------SYRAAVLVNAAGAWCDAIAGLAG-VRPLGLQP----KRRSAFIFAPPPGIDCHD--WPML 247 (381)
T ss_dssp CSSE----------------EEEESEEEECCGGGHHHHHHHHT-CCCCCCEE----EEEEEEEECCCTTCCCTT--CCEE
T ss_pred eCCC----------------EEEcCEEEECCChhHHHHHHHhC-CCCCceee----eEEEEEEECCCcCCCcCc--cceE
Confidence 9888 89999999999999999999884 43 34455 999999886542111111 1111
Q ss_pred CCCCceeEEeeecCCcEEECCCccccCCcccccccccccccCCChhhHHHHHHHHhhhCCCCCCCCcccccccccceecC
Q 023079 160 EDGGLGVHVTLDLDGQIKFGPDVEWIDGIDDTLSFLNRFDYSVNANRAERFYPEIRKYYPDLRDGSLQPSYAGIRPKLSG 239 (287)
Q Consensus 160 ~~~~~~~~~~~~~~g~l~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~i~~~~~G~r~~~~~ 239 (287)
...+.+.|++|.. |++++|++.+... +..+...+...++.+++.+.+ +|.+...++.+.|+|+||+
T Consensus 248 ~~~~~~~y~~p~~-g~~~ig~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~w~G~r~~--- 313 (381)
T 3nyc_A 248 VSLDESFYLKPDA-GMLLGSPANADPV---------EAHDVQPEQLDIATGMYLIEE-ATTLTIRRPEHTWAGLRSF--- 313 (381)
T ss_dssp EETTSSCEEEEET-TEEEEECCCCEEC---------CSSCCCCCHHHHHHHHHHHHH-HBSCCCCCCSEEEEEEEEE---
T ss_pred EeCCCCEEEEeCC-CcEEEeCCcCCCC---------CcccCCCChHHHHHHHHHHHh-cCCCcccceeeeeEEcccc---
Confidence 0013348899986 8999998765421 123334455567788888766 5788888999999999999
Q ss_pred CCCCCCCeEEecCCCCCCCCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 240 PRQSPIDFVIQGDDTHGVPGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 240 ~~~~~~~~~i~~~~~~~~~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
++|..|+||+.+ +.+|+|+++|++|+|++++|++|+++|++|+
T Consensus 314 --t~D~~p~ig~~~--~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~ 356 (381)
T 3nyc_A 314 --VADGDLVAGYAA--NAEGFFWVAAQGGYGIQTSAAMGEASAALIR 356 (381)
T ss_dssp --CTTSCCEEEECT--TSTTEEEEECCTTCTTTTHHHHHHHHHHHHT
T ss_pred --CCCCCceecCCC--CCCCeEEEEcCCChhHhhCHHHHHHHHHHHh
Confidence 457788999987 6799999999999999999999999999985
No 3
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.98 E-value=6.8e-31 Score=240.51 Aligned_cols=239 Identities=18% Similarity=0.160 Sum_probs=196.4
Q ss_pred chhcCCCeeeeeCHHHHHhhCCCcc---cceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEE-E
Q 023079 4 GTANGVHGLRMLEGFEAMKMEPELQ---CVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMN-V 79 (287)
Q Consensus 4 ~~~~g~~~~~~L~~~ei~~~~P~l~---~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~-V 79 (287)
.++.|++ +++++++++.+++|.+. ..+|+|.|+++++||..++.+|.+.++++|++|+++++|+++..++++|. |
T Consensus 107 ~~~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv 185 (382)
T 1y56_B 107 QNKFGVP-TKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGV 185 (382)
T ss_dssp HHHTTCC-CEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEE
T ss_pred HHhcCCC-cEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEE
Confidence 3567887 99999999999999875 57899999999999999999999999999999999999999998888887 9
Q ss_pred EecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHhCCCC--CcccCCccccceEEEEEcCCCCCCCC-ceee
Q 023079 80 YISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRFIGLD--NVFIPPAYYARGCYFSLANTKVAPFK-HLIY 156 (287)
Q Consensus 80 ~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~~~~~--~~~~p~~~~~~g~~~~~~~~~~~~~~-~~i~ 156 (287)
+|.+| +++||+||+|+|+|+..|.+.+ +.. +++.| .+|+++.+++.. ...+ ..++
T Consensus 186 ~~~~g----------------~i~a~~VV~A~G~~s~~l~~~~-g~~~~~~~~~----~~g~~~~~~~~~-~~~~~~~~~ 243 (382)
T 1y56_B 186 KTNKG----------------IIKTGIVVNATNAWANLINAMA-GIKTKIPIEP----YKHQAVITQPIK-RGTINPMVI 243 (382)
T ss_dssp EETTE----------------EEECSEEEECCGGGHHHHHHHH-TCCSCCCCEE----EEEEEEEECCCS-TTSSCSEEE
T ss_pred EECCc----------------EEECCEEEECcchhHHHHHHHc-CCCcCcCCCe----eEeEEEEEccCC-cccCCCeEE
Confidence 99877 7999999999999999998887 444 45555 899988886532 1222 3333
Q ss_pred eCCCCCCceeEEeeecCCcEEECC-CccccCCcccccccccccccCCChhhHHHHHHHHhhhCCCCCCCCcccccccccc
Q 023079 157 PIPEDGGLGVHVTLDLDGQIKFGP-DVEWIDGIDDTLSFLNRFDYSVNANRAERFYPEIRKYYPDLRDGSLQPSYAGIRP 235 (287)
Q Consensus 157 ~~~~~~~~~~~~~~~~~g~l~iG~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~i~~~~~G~r~ 235 (287)
.. ...+.|++|..+| +++|. +.... +.++...+.+..+.+++.+.++||.+.+.++.+.|+|+||
T Consensus 244 ~~---~~~~~y~~p~~~g-~~iG~~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~~~~~~g~r~ 309 (382)
T 1y56_B 244 SF---KYGHAYLTQTFHG-GIIGGIGYEIG----------PTYDLTPTYEFLREVSYYFTKIIPALKNLLILRTWAGYYA 309 (382)
T ss_dssp ES---TTTTEEEECCSSS-CCEEECSCCBS----------SCCCCCCCHHHHHHHHHHHHHHCGGGGGSEEEEEEEEEEE
T ss_pred ec---CCCeEEEEEeCCe-EEEecCCCCCC----------CCCCCCCCHHHHHHHHHHHHHhCCCcCCCCceEEEEeccc
Confidence 21 1135889998888 98984 32221 1234455677889999999999999998899999999999
Q ss_pred eecCCCCCCCCeEEecCCCCCCCCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 236 KLSGPRQSPIDFVIQGDDTHGVPGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 236 ~~~~~~~~~~~~~i~~~~~~~~~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
++ +|..|+||..+ +.+|+|+++|++|+|++++|++|++++++|+
T Consensus 310 ~t-----~d~~p~ig~~~--~~~~~~~~~G~~g~G~~~a~~~g~~la~~i~ 353 (382)
T 1y56_B 310 KT-----PDSNPAIGRIE--ELNDYYIAAGFSGHGFMMAPAVGEMVAELIT 353 (382)
T ss_dssp EC-----TTSCCEEEEES--SSBTEEEEECCTTCHHHHHHHHHHHHHHHHH
T ss_pred cC-----CCCCcEeccCC--CCCCEEEEEecCcchHhhhHHHHHHHHHHHh
Confidence 94 56778999987 6789999999999999999999999999875
No 4
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.97 E-value=2.9e-30 Score=236.50 Aligned_cols=244 Identities=16% Similarity=0.165 Sum_probs=194.1
Q ss_pred chhcCCCeeeeeCHHHHHhhCCCcc---cceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEE
Q 023079 4 GTANGVHGLRMLEGFEAMKMEPELQ---CVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVY 80 (287)
Q Consensus 4 ~~~~g~~~~~~L~~~ei~~~~P~l~---~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~ 80 (287)
.+..|++ .++++++++.+++|.+. ..++++.|.+++++|.+++.+|.+.++++|++++++++|+++..+++++.|+
T Consensus 108 ~~~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~ 186 (389)
T 2gf3_A 108 AKEHSLT-VDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIE 186 (389)
T ss_dssp HHHTTCC-CEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEE
T ss_pred HHHcCCC-cEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEE
Confidence 3456887 89999999999999875 5689999999999999999999999999999999999999999887788898
Q ss_pred ecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHhCCCCCcccCCccccceEEEEEcCCCCC-----CCCcee
Q 023079 81 ISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRFIGLDNVFIPPAYYARGCYFSLANTKVA-----PFKHLI 155 (287)
Q Consensus 81 t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~-----~~~~~i 155 (287)
|++| +++||.||+|+|+|+..+++.+ +...++.| .+|+++.++..... ..+..+
T Consensus 187 ~~~g----------------~~~a~~vV~A~G~~~~~l~~~~-g~~~pl~~----~rg~~~~~~~~~~~~~~~~~~p~~~ 245 (389)
T 2gf3_A 187 TANG----------------SYTADKLIVSMGAWNSKLLSKL-NLDIPLQP----YRQVVGFFESDESKYSNDIDFPGFM 245 (389)
T ss_dssp ETTE----------------EEEEEEEEECCGGGHHHHGGGG-TEECCCEE----EEEEEEEECCCHHHHBGGGTCCEEE
T ss_pred eCCC----------------EEEeCEEEEecCccHHHHhhhh-ccCCceEE----EEEEEEEEecCcccccccccCCEEE
Confidence 8777 7999999999999999998877 33444555 99999988654100 111111
Q ss_pred eeCCCCCCceeEEeeecCC-cEEECCCccccCCcccccccccccccCC--ChhhHHHHHHHHhhhCCCCCCCCccccccc
Q 023079 156 YPIPEDGGLGVHVTLDLDG-QIKFGPDVEWIDGIDDTLSFLNRFDYSV--NANRAERFYPEIRKYYPDLRDGSLQPSYAG 232 (287)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~g-~l~iG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~P~l~~~~i~~~~~G 232 (287)
.. .. ...+|++|..+| ++++|.+....... ++..+... +++..+.+++.+.++||.+.. .+.+.|+|
T Consensus 246 ~~--~~-~~~~y~~p~~~g~~~~iG~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~-~~~~~w~g 315 (389)
T 2gf3_A 246 VE--VP-NGIYYGFPSFGGCGLKLGYHTFGQKID------PDTINREFGVYPEDESNLRAFLEEYMPGANG-ELKRGAVC 315 (389)
T ss_dssp EE--ET-TEEEEEECBSTTCCEEEEESSCCEECC------TTTCCCCTTSSHHHHHHHHHHHHHHCGGGCS-CEEEEEEE
T ss_pred Ee--CC-CCcEEEcCCCCCCcEEEEEcCCCCccC------cccccCccCCCHHHHHHHHHHHHHhCCCCCC-CceEEEEE
Confidence 11 11 124788898888 89998654211000 12233445 677889999999999999987 88889999
Q ss_pred ccceecCCCCCCCCeEEecCCCCCCCCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 233 IRPKLSGPRQSPIDFVIQGDDTHGVPGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 233 ~r~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
+||. ++|..|+||..+ +.+|+|+++|++|+||+++|++|++++++|.
T Consensus 316 ~r~~-----t~D~~p~ig~~~--~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~ 362 (389)
T 2gf3_A 316 MYTK-----TLDEHFIIDLHP--EHSNVVIAAGFSGHGFKFSSGVGEVLSQLAL 362 (389)
T ss_dssp EEEE-----CTTSCCEEEEET--TEEEEEEEECCTTCCGGGHHHHHHHHHHHHH
T ss_pred Eecc-----CCCCCeEEccCC--CCCCEEEEECCccccccccHHHHHHHHHHHc
Confidence 9998 456788999876 6789999999999999999999999999875
No 5
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.97 E-value=5.2e-30 Score=233.67 Aligned_cols=240 Identities=15% Similarity=0.155 Sum_probs=187.5
Q ss_pred chhcCCCeeeeeCHHHHHhhCCCcc---cceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEE
Q 023079 4 GTANGVHGLRMLEGFEAMKMEPELQ---CVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVY 80 (287)
Q Consensus 4 ~~~~g~~~~~~L~~~ei~~~~P~l~---~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~ 80 (287)
.+..|++ +++++++++.+++|.+. ..+|+|.|++|++||.+++.+|.+.++++|++++++++|+++..++++|.|+
T Consensus 107 ~~~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~ 185 (372)
T 2uzz_A 107 AEQWQLN-VEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIE 185 (372)
T ss_dssp HHHTTCC-EEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEE
T ss_pred HHHcCCC-cEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEE
Confidence 4567887 99999999999999864 5689999999999999999999999999999999999999999887788899
Q ss_pred ecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHhCCCCCcccCCccccceEEEEEcCCCCC----CCCceee
Q 023079 81 ISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRFIGLDNVFIPPAYYARGCYFSLANTKVA----PFKHLIY 156 (287)
Q Consensus 81 t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~----~~~~~i~ 156 (287)
|.+| +++||+||+|+|+|+..|++ .+++.| .+|+++.+...... .++..+.
T Consensus 186 ~~~g----------------~~~a~~vV~a~G~~s~~l~~-----~l~~~p----~rg~~~~~~~~~~~~~~~~~p~~~~ 240 (372)
T 2uzz_A 186 TADG----------------EYQAKKAIVCAGTWVKDLLP-----ELPVQP----VRKVFAWYQADGRYSVKNKFPAFTG 240 (372)
T ss_dssp ESSC----------------EEEEEEEEECCGGGGGGTST-----TCCCEE----EECCEEEECCCGGGSTTTTCCEEEE
T ss_pred ECCC----------------eEEcCEEEEcCCccHHhhcc-----ccCceE----EEEEEEEEEeccccCccccCCEEEE
Confidence 9888 79999999999999998764 233445 89988877643110 0111111
Q ss_pred eCCCCCCceeEEeeecCCcEEECCCcc--ccCCcccccccccccccCCChhhHHHHHHHHhhhCCCCCCCCccccccccc
Q 023079 157 PIPEDGGLGVHVTLDLDGQIKFGPDVE--WIDGIDDTLSFLNRFDYSVNANRAERFYPEIRKYYPDLRDGSLQPSYAGIR 234 (287)
Q Consensus 157 ~~~~~~~~~~~~~~~~~g~l~iG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~i~~~~~G~r 234 (287)
..+ .+...|++|..+|++++|.+.. ..+.. .+..+...+++..+.+++.+.++||.+. ++...|+|+|
T Consensus 241 ~~~--~~~~~y~~p~~~~~~~iG~~~~g~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~P~l~--~~~~~~~g~r 310 (372)
T 2uzz_A 241 ELP--NGDQYYGFPAENDALKIGKHNGGQVIHSA------DERVPFAEVVSDGSEAFPFLRNVLPGIG--CCLYGAACTY 310 (372)
T ss_dssp ECT--TCCEEEEECCSSSCEEEEESSCCEECCSG------GGCCCTTTSTTGGGSSHHHHHHHSCSCC--CEEEECCCEE
T ss_pred ecC--CCCeEEecCCCCCeEEEEecCCCCccCCh------hhccCCCCCHHHHHHHHHHHHHHCCCCC--ccceeeEEee
Confidence 111 1234677787788999997642 11110 0112233345667789999999999987 6788899999
Q ss_pred ceecCCCCCCCCeEEecCCCCCCCCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 235 PKLSGPRQSPIDFVIQGDDTHGVPGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 235 ~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
|. ++|..|+||+.+ +.+|+|+++|++|+|++++|++|++++++|+
T Consensus 311 ~~-----t~d~~p~ig~~~--~~~~l~~~~G~~g~G~~~ap~~g~~la~~i~ 355 (372)
T 2uzz_A 311 DN-----SPDEDFIIDTLP--GHDNTLLITGLSGHGFKFASVLGEIAADFAQ 355 (372)
T ss_dssp EE-----CTTSCCCEEEET--TEEEEEEECCCCSCCGGGHHHHHHHHHHHHT
T ss_pred cc-----CCCCCeEEecCC--CCCCEEEEeCCCccchhccHHHHHHHHHHHh
Confidence 98 456778999886 6789999999999999999999999999985
No 6
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.96 E-value=1e-28 Score=227.44 Aligned_cols=246 Identities=12% Similarity=0.014 Sum_probs=190.6
Q ss_pred hhcCCCeeeeeCHHHHHhhCCCcc---cceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEe
Q 023079 5 TANGVHGLRMLEGFEAMKMEPELQ---CVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYI 81 (287)
Q Consensus 5 ~~~g~~~~~~L~~~ei~~~~P~l~---~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t 81 (287)
++.|++ .++++++++.+++|.+. ..+|+|.|++|+++|..++.+|.+.++++|++|+++++|+++..++++|.|+|
T Consensus 112 ~~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t 190 (397)
T 2oln_A 112 DKLSVR-YEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTT 190 (397)
T ss_dssp HHTTCC-CEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEE
T ss_pred HHcCCC-ceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEE
Confidence 456886 89999999999999874 57899999999999999999999999999999999999999998888888988
Q ss_pred cCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHhCCCCCcccCCccccceEEEEEcCCCCC-CCCceeeeCCC
Q 023079 82 SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRFIGLDNVFIPPAYYARGCYFSLANTKVA-PFKHLIYPIPE 160 (287)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~-~~~~~i~~~~~ 160 (287)
+++ +++||+||+|+|+|+..+.+.+ +..+++.| .+++++.+...... ..+..+.....
T Consensus 191 ~~g----------------~i~a~~VV~A~G~~s~~l~~~~-g~~~p~~~----~~~~~~~~~~~~~~~~~p~~~~~~~~ 249 (397)
T 2oln_A 191 DRG----------------TYRAGKVVLACGPYTNDLLEPL-GARLAYSV----YEMAIAAYRQATPVTEAPFWFAFQQP 249 (397)
T ss_dssp SSC----------------EEEEEEEEECCGGGHHHHHGGG-TCCCCEEE----EEEEEEEEEBCSCCSCCCEEEEECCC
T ss_pred CCC----------------EEEcCEEEEcCCcChHHHhhhc-CCCCCeeE----EEEEEEEEeecCcccCCCEEEEecCC
Confidence 777 8999999999999999999887 44555555 89998888654211 11212111111
Q ss_pred CC--CceeEEeeecCC----cEEECCCccc-cCCcccccccccccccCCChhhHHHHHHHHhhhCCCCCCCCcccccccc
Q 023079 161 DG--GLGVHVTLDLDG----QIKFGPDVEW-IDGIDDTLSFLNRFDYSVNANRAERFYPEIRKYYPDLRDGSLQPSYAGI 233 (287)
Q Consensus 161 ~~--~~~~~~~~~~~g----~l~iG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~i~~~~~G~ 233 (287)
.. +.+.|++|..+| ++++|.+.+. .... ++..+...+++..+.+.+.+.++||.+.. .+...|+|.
T Consensus 250 ~~~~~~~~y~~p~~~~~~~~~~~~G~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~p~l~~-~~~~~~~g~ 322 (397)
T 2oln_A 250 TPQDTNLFYGFGHNPWAPGEFVRCGPDFEVDPLDH------PSAATGVADRRQMDRLSGWLRDHLPTVDP-DPVRTSTCL 322 (397)
T ss_dssp CSSSCCCEEECCCCSSSSSSEEEEEECCCCSCCSS------GGGCCSSCCHHHHHHHHHHHHHHCTTBCS-SCSEEEEEE
T ss_pred CCcccceEEECCCCCCCCCceEEEEecCCCCCcCC------CccccCCCCHHHHHHHHHHHHHhCCCCCC-CceeEEEEE
Confidence 00 114788887665 6999966531 1000 12234456677889999999999999986 778889999
Q ss_pred cceecCCCCCCCCeEEecCCCCC----CCCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 234 RPKLSGPRQSPIDFVIQGDDTHG----VPGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 234 r~~~~~~~~~~~~~~i~~~~~~~----~~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
|+.+. ++|..|+||+.+ + .+|+|+++| |+||+++|++|+++|++|+
T Consensus 323 ~~~p~---t~D~~p~ig~~~--~~~~~~~~l~~a~G--g~G~~~ap~~g~~la~~i~ 372 (397)
T 2oln_A 323 AVLPT---DPERQFFLGTAR--DLMTHGEKLVVYGA--GWAFKFVPLFGRICADLAV 372 (397)
T ss_dssp EEEES---STTCCCEEEEST--TTSTTGGGEEEEEE--SSCGGGHHHHHHHHHHHHH
T ss_pred ecCCc---CCCCCeEeecCC--ccccCCCCEEEEeC--cchhhccHHHHHHHHHHHh
Confidence 88221 467889999976 5 689999999 7999999999999999985
No 7
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.96 E-value=2.8e-28 Score=222.95 Aligned_cols=229 Identities=16% Similarity=0.217 Sum_probs=191.6
Q ss_pred eeeeCHHHHHhhCCCcc--cceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCccccc
Q 023079 12 LRMLEGFEAMKMEPELQ--CVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRN 89 (287)
Q Consensus 12 ~~~L~~~ei~~~~P~l~--~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~ 89 (287)
+++++++++.+++|.+. ..++++.|.+++++|..++.+|.+.+++.|++++++++|+++..++++|.|+|.+|
T Consensus 130 ~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g----- 204 (382)
T 1ryi_A 130 VSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG----- 204 (382)
T ss_dssp EEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-----
T ss_pred eEEECHHHHHHhCCCCCcccceEEEeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-----
Confidence 78899999999999875 57899999999999999999999999999999999999999998888888888777
Q ss_pred CCCCCCCCCceeEecCEEEEcCCCCchHHHHHhCCCCCcccCCccccceEEEEEcCCCCCCCCceeeeCCCCCCceeEEe
Q 023079 90 WDGVSPLQPELTLIPKLVVNSAGLSAPALAKRFIGLDNVFIPPAYYARGCYFSLANTKVAPFKHLIYPIPEDGGLGVHVT 169 (287)
Q Consensus 90 ~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 169 (287)
+++||+||+|+|.|+..+++.+ +..+++.| .+|+++.++... ..++..++. .+.|++
T Consensus 205 -----------~~~a~~vV~A~G~~s~~l~~~~-~~~~~~~~----~~g~~~~~~~~~-~~~~~~~~~------~~~~~~ 261 (382)
T 1ryi_A 205 -----------DVWANHVVVASGVWSGMFFKQL-GLNNAFLP----VKGECLSVWNDD-IPLTKTLYH------DHCYIV 261 (382)
T ss_dssp -----------EEEEEEEEECCGGGTHHHHHHT-TCCCCCEE----EEEEEEEEECCS-SCCCSEEEE------TTEEEE
T ss_pred -----------eEEcCEEEECCChhHHHHHHhc-CCCCceec----cceEEEEECCCC-CCccceEEc------CCEEEE
Confidence 7999999999999999998887 44545555 899988886542 123334432 237889
Q ss_pred eecCCcEEECCCccccCCcccccccccccccCCChhhHHHHHHHHhhhCCCCCCCCcccccccccceecCCCCCCCCeEE
Q 023079 170 LDLDGQIKFGPDVEWIDGIDDTLSFLNRFDYSVNANRAERFYPEIRKYYPDLRDGSLQPSYAGIRPKLSGPRQSPIDFVI 249 (287)
Q Consensus 170 ~~~~g~l~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~i~~~~~G~r~~~~~~~~~~~~~~i 249 (287)
|..+|++++|.+.+.. .++...+.+..+.+++.+.++||.+...++...|+|+||+. ++..++|
T Consensus 262 p~~~g~~~vG~~~~~~-----------~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~~~~w~g~~~~t-----~d~~p~i 325 (382)
T 1ryi_A 262 PRKSGRLVVGATMKPG-----------DWSETPDLGGLESVMKKAKTMLPAIQNMKVDRFWAGLRPGT-----KDGKPYI 325 (382)
T ss_dssp ECTTSEEEEECCCEET-----------CCCCSCCHHHHHHHHHHHHHHCGGGGGSEEEEEEEEEEEEC-----SSSCCEE
T ss_pred EcCCCeEEEeeccccc-----------CCCCCCCHHHHHHHHHHHHHhCCCcCCCceeeEEEEecccC-----CCCCcEe
Confidence 9888899999875532 23334566788999999999999998888899999999994 4667899
Q ss_pred ecCCCCCCCCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 250 QGDDTHGVPGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 250 ~~~~~~~~~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
|..+ +.+|+|+++|++|+|+++||.+|+++|++|+
T Consensus 326 g~~~--~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~ 360 (382)
T 1ryi_A 326 GRHP--EDSRILFAAGHFRNGILLAPATGALISDLIM 360 (382)
T ss_dssp EEET--TEEEEEEEECCSSCTTTTHHHHHHHHHHHHT
T ss_pred ccCC--CcCCEEEEEcCCcchHHHhHHHHHHHHHHHh
Confidence 9876 5689999999999999999999999999985
No 8
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.96 E-value=3.5e-28 Score=223.88 Aligned_cols=238 Identities=14% Similarity=0.159 Sum_probs=192.6
Q ss_pred chhcCCCeeeeeCHHHHHhhCCCcc--------cceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCC
Q 023079 4 GTANGVHGLRMLEGFEAMKMEPELQ--------CVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGN 75 (287)
Q Consensus 4 ~~~~g~~~~~~L~~~ei~~~~P~l~--------~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~ 75 (287)
.+..|++ +++++.+++.+++|.+. ..+++|.|.++++||..++.+|.+.+++.|++++++++|+++..+++
T Consensus 127 ~~~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~ 205 (405)
T 2gag_B 127 NKLNGVD-AEWLDPSQVKEACPIINTSDDIRYPVMGATWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGE 205 (405)
T ss_dssp HHTBTCC-CEEECHHHHHHHCTTSCCSTTSSSCCCEEEEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSS
T ss_pred HHhcCCC-ceEeCHHHHHhhCCCCcccccccccceeEEEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCC
Confidence 3467886 99999999999999763 46899999999999999999999999999999999999999998766
Q ss_pred e-EEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHhCCCCCcccCCccccceEEEEEcCCCCCCCCce
Q 023079 76 C-MNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRFIGLDNVFIPPAYYARGCYFSLANTKVAPFKHL 154 (287)
Q Consensus 76 ~-~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~~~~ 154 (287)
+ +.|+|.+| +++||.||+|+|+|+..+.+.+ +...++.| .+++++.+++. ...+...
T Consensus 206 ~~~~v~~~~g----------------~~~a~~vV~a~G~~s~~l~~~~-g~~~~~~~----~~~~~~~~~~~-~~~~~~~ 263 (405)
T 2gag_B 206 KVTGVKTTRG----------------TIHAGKVALAGAGHSSVLAEMA-GFELPIQS----HPLQALVSELF-EPVHPTV 263 (405)
T ss_dssp BEEEEEETTC----------------CEEEEEEEECCGGGHHHHHHHH-TCCCCEEE----EEEEEEEEEEB-CSCCCSE
T ss_pred EEEEEEeCCc----------------eEECCEEEECCchhHHHHHHHc-CCCCCccc----cceeEEEecCC-ccccCce
Confidence 5 56888877 7999999999999999998888 45555455 88888777532 1112223
Q ss_pred eeeCCCCCCceeEEeeecCCcEEECCCccccCCcccccccccccccCCChhhHHHHHHHHhhhCCCCCCCCccccccccc
Q 023079 155 IYPIPEDGGLGVHVTLDLDGQIKFGPDVEWIDGIDDTLSFLNRFDYSVNANRAERFYPEIRKYYPDLRDGSLQPSYAGIR 234 (287)
Q Consensus 155 i~~~~~~~~~~~~~~~~~~g~l~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~i~~~~~G~r 234 (287)
++. . ..++|++|..+|++++|.+.+... ..+...+.+..+.+++.+.+++|.+.+.++...|+|+|
T Consensus 264 ~~~---~-~~~~y~~p~~~g~~~ig~~~~~~~----------~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~~~~w~g~~ 329 (405)
T 2gag_B 264 VMS---N-HIHVYVSQAHKGELVMGAGIDSYN----------GYGQRGAFHVIQEQMAAAVELFPIFARAHVLRTWGGIV 329 (405)
T ss_dssp EEE---T-TTTEEEEECTTSEEEEEEEECSSC----------CCSSCCCTHHHHHHHHHHHHHCGGGGGCEECEEEEEEE
T ss_pred EEe---C-CCcEEEEEcCCCcEEEEeccCCCC----------ccccCCCHHHHHHHHHHHHHhCCccccCCcceEEeecc
Confidence 221 1 234788998889999997654321 12334456778899999999999998888999999999
Q ss_pred ceecCCCCCCCCeEEecCCCCCCCCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 235 PKLSGPRQSPIDFVIQGDDTHGVPGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 235 ~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
|+. ++..|+||..+ .+|+|+++|++|+|++++|++|+.+|++|+
T Consensus 330 ~~t-----~d~~p~ig~~~---~~~l~~~~G~~g~G~~~a~~~g~~la~~i~ 373 (405)
T 2gag_B 330 DTT-----MDASPIISKTP---IQNLYVNCGWGTGGFKGTPGAGFTLAHTIA 373 (405)
T ss_dssp EEE-----TTSCCEEEECS---SBTEEEEECCGGGCSTTHHHHHHHHHHHHH
T ss_pred ccC-----CCCCCEecccC---CCCEEEEecCCCchhhHHHHHHHHHHHHHh
Confidence 994 46678999875 579999999999999999999999999875
No 9
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.96 E-value=3e-28 Score=227.97 Aligned_cols=240 Identities=19% Similarity=0.228 Sum_probs=188.0
Q ss_pred chhcCCCee-----eee-----------CHHHHHhhCCCc-ccceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCce
Q 023079 4 GTANGVHGL-----RML-----------EGFEAMKMEPEL-QCVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTS 66 (287)
Q Consensus 4 ~~~~g~~~~-----~~L-----------~~~ei~~~~P~l-~~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~ 66 (287)
.++.|++ . +++ +++|+.+. .. ...++++.+.++++||.+++.+|.+.++++|++|+++++
T Consensus 127 ~~~~g~~-~~p~~~~~l~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~ 203 (448)
T 3axb_A 127 AGEEGRD-YLIIPPEELERRLGMNTRVSDGEEAEVL--GVGDVEGAVLIRSAGFLDAEKVVDYYYRRASGAGVEFIFGRR 203 (448)
T ss_dssp SCCBTTT-EEEECHHHHHHHHCCCCCCTTSSHHHHH--TCCCCCEEEEESSEEECCHHHHHHHHHHHHHHTTCEEEESCC
T ss_pred HHhhCCC-ccccchhhhhhcccccccCCCHHHHHhc--cCCCceEEEEeCCCeEEcHHHHHHHHHHHHHhCCCEEEcCCe
Confidence 3456775 6 778 88888872 22 367799999999999999999999999999999999999
Q ss_pred eEEEEE---------------eCCeE-EEEecCCcccccCCCCCCCCCceeE--ecCEEEEcCCCCchHHHHHhCCCCCc
Q 023079 67 VIGGHL---------------EGNCM-NVYISESKNLRNWDGVSPLQPELTL--IPKLVVNSAGLSAPALAKRFIGLDNV 128 (287)
Q Consensus 67 V~~i~~---------------~~~~~-~V~t~~g~~~~~~~~~~~~~~~~~i--~a~~VV~aaG~~s~~l~~~~~~~~~~ 128 (287)
|+++.. +++++ .|+|.+| ++ +||+||+|+|+|+..|++++ +...+
T Consensus 204 V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g----------------~i~~~Ad~VV~AtG~~s~~l~~~~-g~~~~ 266 (448)
T 3axb_A 204 VVGVELKPRVELGIEGEPLPWQEARASAAVLSDG----------------TRVEVGEKLVVAAGVWSNRLLNPL-GIDTF 266 (448)
T ss_dssp EEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS----------------CEEEEEEEEEECCGGGHHHHHGGG-TCCCS
T ss_pred EEEEEecccccccccccccccCCCceEEEEeCCC----------------EEeecCCEEEECCCcCHHHHHHHc-CCCCc
Confidence 999987 55554 6888887 78 99999999999999999888 45555
Q ss_pred ccCCccccceEEEEEcCCCCCCCCcee----------eeCCCCCCceeEEeeecC-CcEEECCCccccCCcccccccccc
Q 023079 129 FIPPAYYARGCYFSLANTKVAPFKHLI----------YPIPEDGGLGVHVTLDLD-GQIKFGPDVEWIDGIDDTLSFLNR 197 (287)
Q Consensus 129 ~~p~~~~~~g~~~~~~~~~~~~~~~~i----------~~~~~~~~~~~~~~~~~~-g~l~iG~~~~~~~~~~~~~~~~~~ 197 (287)
+.| .+|+++.++.... .+...+ +++... ..++|++|..+ |++++|++.+..+ ++.
T Consensus 267 ~~p----~rg~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~-~~~~y~~p~~~~g~~~iG~~~~~~~--------~~~ 332 (448)
T 3axb_A 267 SRP----KKRMVFRVSASTE-GLRRIMREGDLAGAGAPPLIIL-PKRVLVRPAPREGSFWVQLSDNLGR--------PFA 332 (448)
T ss_dssp EEE----EEEEEEEEECCSH-HHHHHHHHCCTTSSSSCCEEEE-TTTEEEEEETTTTEEEEEECCCTTS--------CBC
T ss_pred ccc----cceEEEEeCCccc-ccccccccccccccCCCceEEc-CCceEEeecCCCCeEEEecCCcccC--------Ccc
Confidence 555 9999998875411 011100 011000 13588999888 8899998775311 012
Q ss_pred ccc--CCChhh-HHHHHHHHhhhCCCCCCCCcccccccccce-ecCCCCCCCCeEEecCCCCCCCCeEEEeCCCCchhhh
Q 023079 198 FDY--SVNANR-AERFYPEIRKYYPDLRDGSLQPSYAGIRPK-LSGPRQSPIDFVIQGDDTHGVPGLVNLFGIESPGLTS 273 (287)
Q Consensus 198 ~~~--~~~~~~-~~~~~~~~~~~~P~l~~~~i~~~~~G~r~~-~~~~~~~~~~~~i~~~~~~~~~~l~~~~G~~g~G~t~ 273 (287)
++. ..+.+. .+.+++.+.++||.+.+.++.+.|+|+||+ . +|..|+||..+ +|+|+++|++|+||++
T Consensus 333 ~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~~~w~G~r~~~t-----~d~~p~ig~~~----~~l~~a~G~~g~G~~~ 403 (448)
T 3axb_A 333 LEEDPQPEEHYYSLAILPILSLYLPQFQDAYPSGGWAGHYDISF-----DANPVVFEPWE----SGIVVAAGTSGSGIMK 403 (448)
T ss_dssp CCSSCCCCHHHHHHHTHHHHHHHCGGGTTCCCSEEEEEEEEEET-----TSSCEEECGGG----CSEEEEECCTTCCGGG
T ss_pred cccccCCChHHHHHHHHHHHHHhCcCcccCCcccceEEEecccc-----CCCCcEeeecC----CCEEEEECCCchhHhH
Confidence 233 456677 889999999999999989999999999999 5 36678999875 7999999999999999
Q ss_pred hHHHHHHHHHHHh
Q 023079 274 SMAIAEYVAAKFL 286 (287)
Q Consensus 274 ap~~g~~va~~i~ 286 (287)
+|++|++++++|+
T Consensus 404 ap~~g~~la~~i~ 416 (448)
T 3axb_A 404 SDSIGRVAAAVAL 416 (448)
T ss_dssp HHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHc
Confidence 9999999999985
No 10
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.95 E-value=9e-28 Score=224.01 Aligned_cols=245 Identities=16% Similarity=0.179 Sum_probs=179.5
Q ss_pred cCCCeeeeeCHHHHHhhCCC-cc---cce--eEEcCCc-eeecHHHHHHHHHHHHHHCCcEEEcCc---eeEEEEEeCCe
Q 023079 7 NGVHGLRMLEGFEAMKMEPE-LQ---CVK--ALLSPAS-GIVDSHSLMLSLVGEAENHGTTFSNNT---SVIGGHLEGNC 76 (287)
Q Consensus 7 ~g~~~~~~L~~~ei~~~~P~-l~---~~~--al~~p~~-g~vdp~~l~~~l~~~a~~~Gv~~~~~~---~V~~i~~~~~~ 76 (287)
.|.+-.++++++++.+++|. +. ..+ |+|.|.+ |+++|..++.+|.+.++++|++|++++ +|+++..++++
T Consensus 117 ~g~~~~~~l~~~~~~~~~p~~l~~~~~~g~~g~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~ 196 (438)
T 3dje_A 117 EDPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENND 196 (438)
T ss_dssp GCTTCEEECSHHHHHTTSCTTTSCSCCTTCEEEEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTE
T ss_pred ccCCceecCCHHHHHHhCCcccccCCCCCceEEEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCe
Confidence 46652388999999999997 62 456 9999999 999999999999999999999999999 99999998888
Q ss_pred EE-EEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHhCCCCCcccCCccccceEEEEEcCCCCC--CCC-
Q 023079 77 MN-VYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRFIGLDNVFIPPAYYARGCYFSLANTKVA--PFK- 152 (287)
Q Consensus 77 ~~-V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~--~~~- 152 (287)
+. |+|.+|. +++||+||+|+|+|+..|++ + ..++.| .+.+...+...... .+.
T Consensus 197 v~gV~t~~G~---------------~i~Ad~VV~AtG~~s~~l~~-l---~~~~~p----~~~~~~~~~l~~~~~~~~~~ 253 (438)
T 3dje_A 197 VKGAVTADGK---------------IWRAERTFLCAGASAGQFLD-F---KNQLRP----TAWTLVHIALKPEERALYKN 253 (438)
T ss_dssp EEEEEETTTE---------------EEECSEEEECCGGGGGGTSC-C---TTCCEE----EEEEEEEEECCGGGHHHHTT
T ss_pred EEEEEECCCC---------------EEECCEEEECCCCChhhhcC-c---ccceee----EEEEEEEEEcChHHhhhhcC
Confidence 87 9998883 79999999999999999876 3 223344 44333332211000 011
Q ss_pred ceeeeCCCCCCceeEEeeecCCc-EEECCCccccCCc----c-ccccccccc-ccCCChhhHHHHHHHHhhhCCCCCCCC
Q 023079 153 HLIYPIPEDGGLGVHVTLDLDGQ-IKFGPDVEWIDGI----D-DTLSFLNRF-DYSVNANRAERFYPEIRKYYPDLRDGS 225 (287)
Q Consensus 153 ~~i~~~~~~~~~~~~~~~~~~g~-l~iG~~~~~~~~~----~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~l~~~~ 225 (287)
..++ .....++|++|..+++ +++|....-.... . ...+ .+. ....+.+..+.+.+.+.++||.|.+.+
T Consensus 254 ~p~~---~~~~~~~~~~p~~~~~~l~i~~~~~g~~~~~~~~~~~~~~--~p~~~~~~~~~~~~~l~~~~~~~~P~l~~~~ 328 (438)
T 3dje_A 254 IPVI---FNIERGFFFEPDEERGEIKICDEHPGYTNMVQSADGTMMS--IPFEKTQIPKEAETRVRALLKETMPQLADRP 328 (438)
T ss_dssp CCEE---EETTTEEECSCCTTTCEEEEEECCSCEECEEECTTCCEEE--CCCCCSSCBHHHHHHHHHHHHHHCGGGTTCC
T ss_pred CCEE---EECCCceecCCCCCCCeEEEEeCCCCccCCccCCCccccc--CCcccccCCHHHHHHHHHHHHHhCcccccCC
Confidence 1111 1113457777764544 7775211000000 0 0000 011 123456678899999999999999999
Q ss_pred cccccccccceecCCCCCCCCeEEecCCCCCCCCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 226 LQPSYAGIRPKLSGPRQSPIDFVIQGDDTHGVPGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 226 i~~~~~G~r~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
+.+.|+|.|++ ++|..|+||..+ ..+|+|+++|++|+||+++|++|+++|++|+
T Consensus 329 ~~~~~~g~~~~-----t~D~~piig~~p--~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~ 382 (438)
T 3dje_A 329 FSFARICWCAD-----TANREFLIDRHP--QYHSLVLGCGASGRGFKYLPSIGNLIVDAME 382 (438)
T ss_dssp CSEEEEEEEEE-----CTTSCCEEEECS--SCTTEEEEECCTTCCGGGTTTHHHHHHHHHH
T ss_pred cceeeEEEeCc-----CCCCCeEEeecC--CCCCEEEEECCCCcchhhhHHHHHHHHHHHh
Confidence 99999999998 467889999987 6799999999999999999999999999985
No 11
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.95 E-value=2.1e-26 Score=221.68 Aligned_cols=241 Identities=19% Similarity=0.244 Sum_probs=183.6
Q ss_pred eeeeeCHHHHHhhCCCcc---cceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeE-EEEecCCcc
Q 023079 11 GLRMLEGFEAMKMEPELQ---CVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCM-NVYISESKN 86 (287)
Q Consensus 11 ~~~~L~~~ei~~~~P~l~---~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~-~V~t~~g~~ 86 (287)
..++++++++.+++|.+. ..+|++.+ ++++||.+++.+|++.|+++|++|+++++|+++..+++++ .|++.+..+
T Consensus 135 ~~~~l~~~~~~~~~P~l~~~~~~gg~~~~-dg~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~t 213 (561)
T 3da1_A 135 RRYMLNEKQTLEKEPLLRKENLKGGGIYV-EYRTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLT 213 (561)
T ss_dssp -CEEECHHHHHHHCTTSCCTTCCEEEEEE-EEECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTT
T ss_pred CcEEECHHHHHHhCccCChhhceeEEEec-CceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCC
Confidence 378999999999999985 45777776 5699999999999999999999999999999999988774 577654211
Q ss_pred cccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHhCCCC--CcccCCccccceEEEEEcCCCCCCCCce-eeeCCCCCC
Q 023079 87 LRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRFIGLD--NVFIPPAYYARGCYFSLANTKVAPFKHL-IYPIPEDGG 163 (287)
Q Consensus 87 ~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~~~~~--~~~~p~~~~~~g~~~~~~~~~~~~~~~~-i~~~~~~~~ 163 (287)
++..+++|+.||||+|+|+..|.++++ .. .++.| .||++++++.... ..+.. +++.+ +.+
T Consensus 214 ----------g~~~~i~A~~VV~AaG~~s~~l~~~~g-~~~~~~v~p----~kG~~lvl~~~~~-~~~~~~~~~~~-~dg 276 (561)
T 3da1_A 214 ----------DTTHTIYAKKVVNAAGPWVDTLREKDR-SKHGKYLKL----SKGVHLVVDQSRF-PLRQAVYFDTE-SDG 276 (561)
T ss_dssp ----------CCEEEEEEEEEEECCGGGHHHHHHTTT-CCCSSEEEE----EEEEEEEEEGGGS-CCSSEEEECCS-SSC
T ss_pred ----------CceEEEECCEEEECCCcchHHHHHhcC-CCCCceEEe----ccEEEEEECCccC-CCceEEEeccC-CCC
Confidence 123479999999999999999999884 32 44455 9999999975321 22333 33432 234
Q ss_pred ceeEEeeecCCcEEECCCccccCCcccccccccccccCCChhhHHHHHHHHhhhCCCCC--CCCcccccccccceecCCC
Q 023079 164 LGVHVTLDLDGQIKFGPDVEWIDGIDDTLSFLNRFDYSVNANRAERFYPEIRKYYPDLR--DGSLQPSYAGIRPKLSGPR 241 (287)
Q Consensus 164 ~~~~~~~~~~g~l~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~--~~~i~~~~~G~r~~~~~~~ 241 (287)
..++++|. +|++++|+|.+.... +..+..+++++++.+++.++++||.+. ..++...|+|+||++.+++
T Consensus 277 r~v~~iP~-~g~~~iGtT~~~~~~--------~~~~~~~t~~~i~~ll~~~~~~~P~l~~~~~~v~~~~aGlRPl~~~~~ 347 (561)
T 3da1_A 277 RMIFAIPR-EGKTYIGTTDTFYDK--------DIASPRMTVEDRDYILAAANYMFPSLRLTADDVESSWAGLRPLIHEEG 347 (561)
T ss_dssp CCEEEEEE-TTEEEECCCCEEECS--------CTTCCCCCHHHHHHHHHHHHHHCTTCCCCTTTEEEEEEEEEEEEEC--
T ss_pred cEEEEEec-CCCEEEcCCCCccCC--------CcCCCCCCHHHHHHHHHHHHHhCCCCCCChhhEEEEeEEeccccCCCC
Confidence 55778887 889999998864321 234667788999999999999999986 8899999999999987642
Q ss_pred CC----CC-CeEEecCCCCCCCCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 242 QS----PI-DFVIQGDDTHGVPGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 242 ~~----~~-~~~i~~~~~~~~~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
.. .+ ++++.. + +|++.++|. ++|+++.+|+.++|++.
T Consensus 348 ~~~~~~sR~~~i~~~-~----~gli~i~Gg---k~Tt~r~mAe~~~d~~~ 389 (561)
T 3da1_A 348 KKASEISRKDEIFFS-D----SGLISIAGG---KLTGYRKMAERTVDAVA 389 (561)
T ss_dssp ---------CCEEEC-S----SCCEEECCC---CSTTHHHHHHHHHHHHH
T ss_pred CCccccccceEEEec-C----CCeEEEeCC---hhhhHHHHHHHHHHHHH
Confidence 11 22 344432 2 699999885 69999999999999864
No 12
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.95 E-value=2.4e-27 Score=233.48 Aligned_cols=235 Identities=15% Similarity=0.115 Sum_probs=186.1
Q ss_pred cCCC--eeeeeCHHHHHhhCCCcc-cceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecC
Q 023079 7 NGVH--GLRMLEGFEAMKMEPELQ-CVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISE 83 (287)
Q Consensus 7 ~g~~--~~~~L~~~ei~~~~P~l~-~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~ 83 (287)
.|++ .+++++++++.+++| +. ..+|+|.|.+|+++|..++.+|.+.++++|++|+++++|+++..++++|.|+|.+
T Consensus 373 ~g~~~~~~~~l~~~~~~~~~~-l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~ 451 (689)
T 3pvc_A 373 TQWPVEFAEAMSREQLSELAG-LDCAHDGIHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQ 451 (689)
T ss_dssp SCCCTTTCEEECHHHHHHHHS-SCCSSCEEEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-
T ss_pred cCCChHHhhccCHHHHHHhcC-CCcccceEEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCC
Confidence 4554 134999999999998 65 6789999999999999999999999999999999999999999988889999987
Q ss_pred CcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHhCCCCCcccCCccccceEEEEEcCCCCC-CCCceeeeCCCCC
Q 023079 84 SKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRFIGLDNVFIPPAYYARGCYFSLANTKVA-PFKHLIYPIPEDG 162 (287)
Q Consensus 84 g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~-~~~~~i~~~~~~~ 162 (287)
|. .+++||.||+|+|+|+..+.+.+ .+++.| .+|+++.+...... .++..+.
T Consensus 452 G~--------------~~i~Ad~VVlAtG~~s~~l~~~~---~lpl~p----~rGq~~~~~~~~~~~~l~~v~~------ 504 (689)
T 3pvc_A 452 SQ--------------AAKHHATVILATGHRLPEWEQTH---HLPLSA----VRGQVSHIPTTPVLSQLQQVLC------ 504 (689)
T ss_dssp CC--------------CCEEESEEEECCGGGTTCSTTTT---TSCCEE----EEEEEEEEECCTTGGGCCSEEE------
T ss_pred Cc--------------EEEECCEEEECCCcchhcccccc---CCcccc----ccCcEEEECCCCccccCCeeEe------
Confidence 71 15899999999999999887655 234444 99999988654210 1222211
Q ss_pred CceeEEeeec--CCcEEECCCccccCCcccccccccccccCCChhhHHHHHHHHhhhCCCCC-----CCCcccccccccc
Q 023079 163 GLGVHVTLDL--DGQIKFGPDVEWIDGIDDTLSFLNRFDYSVNANRAERFYPEIRKYYPDLR-----DGSLQPSYAGIRP 235 (287)
Q Consensus 163 ~~~~~~~~~~--~g~l~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-----~~~i~~~~~G~r~ 235 (287)
. +.|++|.. +|.+++|++.+.. ..+...+.+..+.+++.+.++||.+. +..+.+.|+|+||
T Consensus 505 ~-~~Yl~P~~~~~g~~~iGat~~~~-----------~~d~~~~~~~~~~ll~~l~~~~P~l~~~~~~~~~~~~~w~G~R~ 572 (689)
T 3pvc_A 505 Y-DGYLTPVNPANQHHCIGASYQRG-----------DIATDFRLTEQQENRERLLRCLPQVSWPQQVDVSDNQARCGVRC 572 (689)
T ss_dssp S-SSEECCCBTTTTEEEEECCCEET-----------BCCCCCCHHHHHHHHHHHHHHCTTCSGGGGCCCTTCCEEEEEEE
T ss_pred C-CceEccccCCCCeEEEEEeccCC-----------CCCCCCCHHHHHHHHHHHHHhCCCccccccccccccceeEEEee
Confidence 1 26889987 7899999876643 23445567788899999999999987 4467889999999
Q ss_pred eecCCCCCCCCeEEecCCC-----------------------------CCCCCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 236 KLSGPRQSPIDFVIQGDDT-----------------------------HGVPGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 236 ~~~~~~~~~~~~~i~~~~~-----------------------------~~~~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
.+ +|..++||..+. +..+|+|+++|++|+|+++||++|+++|++|.
T Consensus 573 ~t-----~D~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~l~~a~G~g~~Gl~~ap~~ae~lA~~i~ 647 (689)
T 3pvc_A 573 AI-----RDHLPMVGAVPDYAATLAQYQDLSRRIQHGGESEVNDIAVAPVWPELFMVGGLGSRGLCSAPLVAEILAAQMF 647 (689)
T ss_dssp EC-----TTSCCEEEEEECHHHHHHHSTTHHHHC--------CCCCCCCEEEEEEEEECCTTCHHHHHHHHHHHHHHHHT
T ss_pred ec-----CCCCcccCcCCCHHHHHHHHHhhhccccccccccccccccCCCCCChHHhhcccccHHHHHHHHHHHHHHHHc
Confidence 94 566779997651 01579999999999999999999999999985
No 13
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.95 E-value=6.7e-27 Score=229.85 Aligned_cols=232 Identities=13% Similarity=0.109 Sum_probs=186.8
Q ss_pred cCCC--eeeeeCHHHHHhhCCCcc-cceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecC
Q 023079 7 NGVH--GLRMLEGFEAMKMEPELQ-CVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISE 83 (287)
Q Consensus 7 ~g~~--~~~~L~~~ei~~~~P~l~-~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~ 83 (287)
.|++ .+++++++++.+++| +. ..+|++.|.+++++|..++.+|.+.++++|++|+++++|+++..++++|.|+|.+
T Consensus 378 ~g~~~~~~~~l~~~~~~~~~~-l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~ 456 (676)
T 3ps9_A 378 MDLPAELAVAVEANAVEQITG-VATNCSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAG 456 (676)
T ss_dssp SCCCTTTCEEECHHHHHHHHS-SCCSSCEEEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETT
T ss_pred cCCcHHHhhhCCHHHHHHhhC-CCccCCcEEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECC
Confidence 3554 244999999999988 54 6789999999999999999999999999999999999999999998899999987
Q ss_pred CcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHhCCCCCcccCCccccceEEEEEcCCCC-CCCCceeeeCCCCC
Q 023079 84 SKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRFIGLDNVFIPPAYYARGCYFSLANTKV-APFKHLIYPIPEDG 162 (287)
Q Consensus 84 g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~-~~~~~~i~~~~~~~ 162 (287)
|. +++||.||+|+|+|+..+.+.. .+++.| .+|+++.+..... ..++..+
T Consensus 457 G~---------------~i~Ad~VVlAtG~~s~~l~~~~---~lpl~p----~rGq~~~~~~~~~~~~l~~~l------- 507 (676)
T 3ps9_A 457 DQ---------------QATHSVVVLANGHQISRFSQTS---TLPVYS----VAGQVSHIPTTPELAELKQVL------- 507 (676)
T ss_dssp SC---------------EEEESEEEECCGGGGGCSTTTT---TCSCEE----EEEEEEEEECCTTGGGCCSEE-------
T ss_pred CC---------------EEECCEEEECCCcchhcccccc---CCccee----ecCEEEEECCCcccccCCcee-------
Confidence 62 7999999999999999887654 234444 9999998865311 0122221
Q ss_pred CceeEEeeec--CCcEEECCCccccCCcccccccccccccCCChhhHHHHHHHHhhhCCCCC-----CCCcccccccccc
Q 023079 163 GLGVHVTLDL--DGQIKFGPDVEWIDGIDDTLSFLNRFDYSVNANRAERFYPEIRKYYPDLR-----DGSLQPSYAGIRP 235 (287)
Q Consensus 163 ~~~~~~~~~~--~g~l~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-----~~~i~~~~~G~r~ 235 (287)
..+.|++|.. +|++++|++.+.. ..+...+.+..+++++.+.++||.+. +..+.+.|+|+||
T Consensus 508 ~~~~Yl~P~~~~~g~~~iG~t~~~~-----------~~d~~~~~~~~~~~l~~l~~~~P~l~~~~~~d~~~~~~~~G~R~ 576 (676)
T 3ps9_A 508 CYDGYLTPQNPANQHHCIGASYHRG-----------SEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGVRC 576 (676)
T ss_dssp ESSSEECCCBTTTTEEEEECCCEET-----------CCCCCCCHHHHHHHHHHHHHHSTTCHHHHTCCCTTCCEEEEEEE
T ss_pred ECCeeeccccCCCCeEEEeeccCCC-----------CCCCCCCHHHHHHHHHHHHHhCCCccccccCcccccceEEEEeC
Confidence 1126889987 7899999876642 23445567788899999999999986 3456889999999
Q ss_pred eecCCCCCCCCeEEecCCCCC-----------------------CCCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 236 KLSGPRQSPIDFVIQGDDTHG-----------------------VPGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 236 ~~~~~~~~~~~~~i~~~~~~~-----------------------~~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
.+ +|..|+||..+ . .+|+|+++|++|+||++||++|+++|++|.
T Consensus 577 ~t-----~D~lPiiG~~p--~~~~~~~~y~~l~~~~~~~~~~~~~~~l~~a~G~g~~Gl~~Ap~~ae~lA~~i~ 643 (676)
T 3ps9_A 577 AT-----RDHLPMVGNVP--DYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAPLCAEILAAQMS 643 (676)
T ss_dssp EC-----TTCCCEEEEEE--CHHHHHHHTTTTTSCCTTCCSCCEEEEEEEEECCTTCHHHHHHHHHHHHHHHHT
T ss_pred cc-----CCcCCccCcCC--ChHHHHHHHHhhhccccccccCCCCCCEeeeecccccHHHHHHHHHHHHHHHHc
Confidence 94 56778999865 3 579999999999999999999999999985
No 14
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.95 E-value=8.1e-26 Score=218.06 Aligned_cols=247 Identities=19% Similarity=0.226 Sum_probs=182.9
Q ss_pred hcCCCeeeeeCHHHHHhhCCCcc---cceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCe-EEEEe
Q 023079 6 ANGVHGLRMLEGFEAMKMEPELQ---CVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNC-MNVYI 81 (287)
Q Consensus 6 ~~g~~~~~~L~~~ei~~~~P~l~---~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~-~~V~t 81 (287)
..+.+ .++|+++++.+++|.++ ..+|++.++ +++||.+++.++++.|+++|++|+++++|+++..++++ +.|++
T Consensus 149 ~~~~~-~~~l~~~e~~~~~P~l~~~~~~gg~~~~d-g~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~ 226 (571)
T 2rgh_A 149 GTKYE-NYTLTPEEVLEREPFLKKEGLKGAGVYLD-FRNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKA 226 (571)
T ss_dssp SSTTC-CEEECHHHHHHHCTTSCCTTEEEEEEECC-EECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEE
T ss_pred ccCCC-cEEECHHHHHHhCcCCchhhceEEEEecC-CeEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEE
Confidence 35665 89999999999999985 567888885 78999999999999999999999999999999988776 44664
Q ss_pred cCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHhCCCC---CcccCCccccceEEEEEcCCCCCCCC-ceeee
Q 023079 82 SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRFIGLD---NVFIPPAYYARGCYFSLANTKVAPFK-HLIYP 157 (287)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~~~~~---~~~~p~~~~~~g~~~~~~~~~~~~~~-~~i~~ 157 (287)
.+..+ ++..+++|+.||||+|+|+..+.++.+ .. .++.| ++|++++++.... ..+ ..++.
T Consensus 227 ~d~~t----------g~~~~i~A~~VV~AaG~ws~~l~~~~g-~~~~~~~i~p----~rG~~l~~~~~~~-~~~~~~~~~ 290 (571)
T 2rgh_A 227 RDLLT----------DEVIEIKAKLVINTSGPWVDKVRNLNF-TRPVSPKMRP----TKGIHLVVDAKKL-PVPQPTYFD 290 (571)
T ss_dssp EETTT----------CCEEEEEBSCEEECCGGGHHHHHTTCC-SSCCCCCBCC----EEEEEEEEEGGGS-CCSSCEEEE
T ss_pred EEcCC----------CCEEEEEcCEEEECCChhHHHHHHhhc-cCccCceeec----cceEEEEeccccC-CCCcEEEEe
Confidence 32100 012379999999999999999988763 32 33555 9999999975311 122 23333
Q ss_pred CCCCCCceeEEeeecCCcEEECCCccccCCcccccccccccccCCChhhHHHHHHHHhhhCCC--CCCCCcccccccccc
Q 023079 158 IPEDGGLGVHVTLDLDGQIKFGPDVEWIDGIDDTLSFLNRFDYSVNANRAERFYPEIRKYYPD--LRDGSLQPSYAGIRP 235 (287)
Q Consensus 158 ~~~~~~~~~~~~~~~~g~l~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~~~i~~~~~G~r~ 235 (287)
.+...+..+|++|. +|.+++|++.+..+. +..+...+++.++.+++.++++||. +...++.+.|+|+||
T Consensus 291 ~~~~dgr~~~~~P~-~~~~~iG~t~~~~~~--------~~~~~~~~~~~~~~ll~~~~~~~P~~~l~~~~v~~~waG~Rp 361 (571)
T 2rgh_A 291 TGKQDGRMVFAIPR-ENKTYFGTTDTDYQG--------DFTDPKVTQEDVDYLLDVINHRYPEANITLADIEASWAGLRP 361 (571)
T ss_dssp CSSSSSCEEEEEEE-TTEEEECCCCEECCS--------CSSSCCCCHHHHHHHHHHHHHHSTTTCCCGGGCCEEEEEEEC
T ss_pred ccCCCCcEEEEEEc-CCeEEEcCCCcCCCC--------CcCCCCCCHHHHHHHHHHHHHhcCccCCchhceeEEeEEeee
Confidence 32122455788887 588999998764321 2335567788999999999999997 477889999999999
Q ss_pred eecCC----CCCCCCeEEecCCCCCCCCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 236 KLSGP----RQSPIDFVIQGDDTHGVPGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 236 ~~~~~----~~~~~~~~i~~~~~~~~~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
+..+. ...+++++|+.. .+|+++++|+ ++|++|.+|+.+++++.
T Consensus 362 ~~~d~~~~~~~~~r~~~i~~~----~~gl~~v~GG---k~Tt~r~~Ae~~~~~i~ 409 (571)
T 2rgh_A 362 LLIGNSGSPSTISRGSSLERE----PDGLLTLSGG---KITDYRKMAEGALRLIR 409 (571)
T ss_dssp CBCC-----------EEEEEC----TTSCEEEEEC---CGGGHHHHHHHHHHHHH
T ss_pred ccCCCCCCcccCCCCcEEecC----CCCeEEEeCc---chhhHHHHHHHHHHHHH
Confidence 98752 112456778654 3799988774 49999999999999874
No 15
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.94 E-value=5.1e-26 Score=228.33 Aligned_cols=250 Identities=16% Similarity=0.206 Sum_probs=191.3
Q ss_pred chhcCCCeeeeeCHHHHHhhCCCcc---cceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeE-EE
Q 023079 4 GTANGVHGLRMLEGFEAMKMEPELQ---CVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCM-NV 79 (287)
Q Consensus 4 ~~~~g~~~~~~L~~~ei~~~~P~l~---~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~-~V 79 (287)
.+..|++ +++++++++.+++|.+. ..+|+|.|.+|++||..++.+|++.++++|++|+++++|+++..+++++ .|
T Consensus 109 ~~~~G~~-~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V 187 (830)
T 1pj5_A 109 AAAWGIE-GRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGV 187 (830)
T ss_dssp HHHHTCC-CEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEE
T ss_pred HHHcCCC-eEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEE
Confidence 4567886 99999999999999885 5789999999999999999999999999999999999999999887776 58
Q ss_pred EecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHhCCCCCcccCCccccceEEEEEcCCCCC-CCC----ce
Q 023079 80 YISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRFIGLDNVFIPPAYYARGCYFSLANTKVA-PFK----HL 154 (287)
Q Consensus 80 ~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~-~~~----~~ 154 (287)
+|++| +++||+||+|+|+|+..+.+++ +..+++.| .+++++.+.+.... ... ..
T Consensus 188 ~t~~G----------------~i~Ad~VV~AaG~~s~~l~~~~-g~~~pl~p----~~g~~~~~~~~~~~~~~~~~~~~~ 246 (830)
T 1pj5_A 188 QTADG----------------VIPADIVVSCAGFWGAKIGAMI-GMAVPLLP----LAHQYVKTTPVPAQQGRNDQPNGA 246 (830)
T ss_dssp EETTE----------------EEECSEEEECCGGGHHHHHHTT-TCCCCCEE----EEEEEEEESCCGGGTTTSCTTTCC
T ss_pred EECCc----------------EEECCEEEECCccchHHHHHHh-CCCcccee----ceeEEEEEecCcccccccccccCC
Confidence 88888 8999999999999999998887 45655566 99999988653110 000 00
Q ss_pred eeeCCCCCCceeEEeeecCCcEEECCCcccc--CCcccccc----cc----cccccCCChhhHHHHHHHHhhhCCCCCCC
Q 023079 155 IYPIPEDGGLGVHVTLDLDGQIKFGPDVEWI--DGIDDTLS----FL----NRFDYSVNANRAERFYPEIRKYYPDLRDG 224 (287)
Q Consensus 155 i~~~~~~~~~~~~~~~~~~g~l~iG~~~~~~--~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~P~l~~~ 224 (287)
-.++......++|++|.. +++++|.+.... ..+.++.. .. .+.+...+.+.++.+++.+.++||.+.+.
T Consensus 247 ~~pv~~~~~~~~y~r~~~-~~l~iG~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~ 325 (830)
T 1pj5_A 247 RLPILRHQDQDLYYREHG-DRYGIGSYAHRPMPVDVDTLGAYAPETVSEHHMPSRLDFTLEDFLPAWEATKQLLPALADS 325 (830)
T ss_dssp CSCEEEEGGGTEEEEEET-TEEEEEECCSCCCBCCGGGSCCCCGGGCBTTBSTTEECCCHHHHHHHHHHHHHHCGGGGGS
T ss_pred CCCeEEcCCCCEEEEEeC-CeEEEeccCCCCcccCcccccccccccccccccccccCCCHHHHHHHHHHHHHhCcccccc
Confidence 011111112347788874 478888754210 00000000 00 01223456678889999999999999999
Q ss_pred CcccccccccceecCCCCCCCCeEEecCCCCCCCCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 225 SLQPSYAGIRPKLSGPRQSPIDFVIQGDDTHGVPGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 225 ~i~~~~~G~r~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
++.+.|+|+||+ ++|..|+||+.+ +.+|+|+++|+ |++++|++|+++|++|.
T Consensus 326 ~i~~~w~G~r~~-----t~D~~PiIG~~p--~~~gl~va~G~---G~~~ap~~g~~la~li~ 377 (830)
T 1pj5_A 326 EIEDGFNGIFSF-----TPDGGPLLGESK--ELDGFYVAEAV---WVTHSAGVAKAMAELLT 377 (830)
T ss_dssp CEEEEEEEEEEE-----CTTSCCEEEECS--SSBTEEEEESC---CGGGHHHHHHHHHHHHH
T ss_pred CcceEEEeeccc-----CCCCCeeeccCC--CCCCEEEEECc---hHHhhHHHHHHHHHHHh
Confidence 999999999999 457788999987 67999999996 79999999999999985
No 16
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.94 E-value=8.6e-27 Score=211.31 Aligned_cols=223 Identities=17% Similarity=0.154 Sum_probs=172.1
Q ss_pred chhcCCCeeeeeCHHHHHhhCCCcccceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecC
Q 023079 4 GTANGVHGLRMLEGFEAMKMEPELQCVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISE 83 (287)
Q Consensus 4 ~~~~g~~~~~~L~~~ei~~~~P~l~~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~ 83 (287)
.++.+.+ +++++++|+ +++|. ..+|++.+ ++++||.+++.+|.+.|+++|++|++ ++|++++..
T Consensus 107 ~~~~~~~-~~~l~~~e~-~~~p~--~~~~~~~~-~~~v~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~---------- 170 (351)
T 3g3e_A 107 WKDTVLG-FRKLTPREL-DMFPD--YGYGWFHT-SLILEGKNYLQWLTERLTERGVKFFQ-RKVESFEEV---------- 170 (351)
T ss_dssp GGGTSEE-EEECCHHHH-TTCTT--CCEEEEEE-EEEECHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHH----------
T ss_pred HHHhCCC-ceECCHHHh-ccCCC--CceEEEec-ceEEcHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHh----------
Confidence 4456775 999999999 56785 45788888 69999999999999999999999998 888776421
Q ss_pred CcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHhCCCCCcccCCccccceEEEEEcCCCCCCCCceeeeCC--CC
Q 023079 84 SKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRFIGLDNVFIPPAYYARGCYFSLANTKVAPFKHLIYPIP--ED 161 (287)
Q Consensus 84 g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~~~~i~~~~--~~ 161 (287)
+ .++||+||+|+|+|+..|++ ..++.| .||+++.++++ .+++.++... ..
T Consensus 171 ~----------------~~~a~~VV~A~G~~s~~l~~-----~~~l~p----~rg~~~~~~~~---~~~~~~~~~~~~~~ 222 (351)
T 3g3e_A 171 A----------------REGADVIVNCTGVWAGALQR-----DPLLQP----GRGQIMKVDAP---WMKHFILTHDPERG 222 (351)
T ss_dssp H----------------HTTCSEEEECCGGGGGGTSC-----CTTCEE----EEEEEEEEECT---TCCSEEEECCTTTC
T ss_pred h----------------cCCCCEEEECCCcChHhhcC-----CCceee----cCCcEEEEeCC---CcceEEEeccccCC
Confidence 2 47899999999999998753 233444 99999998764 2344444321 11
Q ss_pred CCceeEEeeecCCcEEECCCccccCCcccccccccccccCCChhhHHHHHHHHhhhCCCCCCCCcccccccccceecCCC
Q 023079 162 GGLGVHVTLDLDGQIKFGPDVEWIDGIDDTLSFLNRFDYSVNANRAERFYPEIRKYYPDLRDGSLQPSYAGIRPKLSGPR 241 (287)
Q Consensus 162 ~~~~~~~~~~~~g~l~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~i~~~~~G~r~~~~~~~ 241 (287)
.....|++|..+ ++++|++.+.. .++...+++..+.+++.+.++||.+.+.++.+.|+|+||+.+|
T Consensus 223 ~~~~~y~~p~~~-~~~iGg~~~~~-----------~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~r~~t~D-- 288 (351)
T 3g3e_A 223 IYNSPYIIPGTQ-TVTLGGIFQLG-----------NWSELNNIQDHNTIWEGCCRLEPTLKNARIIGERTGFRPVRPQ-- 288 (351)
T ss_dssp TTCSCEEEECSS-CEEEECCCEET-----------CCCCSCCHHHHHHHHHHHHHHCGGGGGCEEEEEEEEEEEECSS--
T ss_pred CCceeEEEeCCC-cEEEeeeeecC-----------CCCCCCCHHHHHHHHHHHHHhCCCccCCcEeeeeEeeCCCCCC--
Confidence 123488999876 89999877642 2344567788999999999999999989999999999999432
Q ss_pred CCCCCeEEecCCCCCCCCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 242 QSPIDFVIQGDDTHGVPGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 242 ~~~~~~~i~~~~~~~~~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
.|-.+++||..+ +.+|+|+++|++|+|+++||++|++++++|.
T Consensus 289 ~p~~~~~ig~~~--~~~~~~~~~G~~g~G~~~ap~~g~~la~li~ 331 (351)
T 3g3e_A 289 IRLEREQLRTGP--SNTEVIHNYGHGGYGLTIHWGCALEAAKLFG 331 (351)
T ss_dssp CEEEEEEECCSS--SCEEEEEEECCTTCHHHHHHHHHHHHHHHHH
T ss_pred ccceeeeccCCC--CCCeEEEEeCCCcchHhhhHHHHHHHHHHHH
Confidence 010113477766 5789999999999999999999999999875
No 17
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.94 E-value=1.6e-26 Score=214.07 Aligned_cols=233 Identities=16% Similarity=0.084 Sum_probs=170.0
Q ss_pred eeCHHHHHhhCCCcc-------cceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeE---------EEEEeCCeE
Q 023079 14 MLEGFEAMKMEPELQ-------CVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVI---------GGHLEGNCM 77 (287)
Q Consensus 14 ~L~~~ei~~~~P~l~-------~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~---------~i~~~~~~~ 77 (287)
+++.+++.+++|.+. ..+|+|.|.++++||..++.+|.+.++++|++++++++|+ ++..++++|
T Consensus 135 ~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v 214 (405)
T 3c4n_A 135 LTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQ 214 (405)
T ss_dssp CEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-----
T ss_pred CCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeE
Confidence 567888888887542 5689999999999999999999999999999999999999 887777778
Q ss_pred EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHH-HhCCCCCcccCCccccceEEEEEcCCCCCCCCceee
Q 023079 78 NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAK-RFIGLDNVFIPPAYYARGCYFSLANTKVAPFKHLIY 156 (287)
Q Consensus 78 ~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~-~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~~~~i~ 156 (287)
.|+|.+| +++||+||+|+|+|+..|.+ .+ +...++.| .+|+++.+..+. ......++
T Consensus 215 ~v~~~~g----------------~i~a~~VV~A~G~~s~~l~~~~~-g~~~~~~~----~~g~~~~~~~~~-~~~~~~~~ 272 (405)
T 3c4n_A 215 IVVHETR----------------QIRAGVIIVAAGAAGPALVEQGL-GLHTRHGR----AYRQFPRLDLLS-GAQTPVLR 272 (405)
T ss_dssp --CBCCE----------------EEEEEEEEECCGGGHHHHHHHHH-CCCCCCEE----EEEECCEECSCC-CTTCCEEE
T ss_pred EEEECCc----------------EEECCEEEECCCccHHHHHHHhc-CCCCCccc----ceeEEEEECCCC-ccCCCeEE
Confidence 7878777 79999999999999999988 87 45544455 889988776431 12222332
Q ss_pred eCCCCCCceeEEeeecCCcEEECCCcc--ccCCcccccccccccccCCChhhHHHHHHHHhhhCCCCCCCC---------
Q 023079 157 PIPEDGGLGVHVTLDLDGQIKFGPDVE--WIDGIDDTLSFLNRFDYSVNANRAERFYPEIRKYYPDLRDGS--------- 225 (287)
Q Consensus 157 ~~~~~~~~~~~~~~~~~g~l~iG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~--------- 225 (287)
..++|++|..+|.+++|++.. ......+... ....+...+.+.++.+.+.+ ++||.+.+..
T Consensus 273 ------~~~~y~~p~~~g~~~~G~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~P~l~~~~~~~~r~~~~ 344 (405)
T 3c4n_A 273 ------ASGLTLRPQNGGYTLVPAIHHRDPHGYHPAGGS-LTGVPTGLRRELLEDLVGLM-DAVPALAGEGLELGRSSAD 344 (405)
T ss_dssp ------ETTEEEEEETTEEEEECCCCSCBCSSCCCCCCC-BTTBCCSSCHHHHHHHHHHT-TTCGGGGSSCBCCCSSGGG
T ss_pred ------CCcEEEEEcCCCeEEEeccccccccCcCccccc-ccccccCCCHHHHHHHHHHH-HhCCCccccCccccccccc
Confidence 234889998888899988743 2110000000 00011233455666776654 8999987765
Q ss_pred cccccccccceecCCCCCCCCeEEecCCCCCCCCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 226 LQPSYAGIRPKLSGPRQSPIDFVIQGDDTHGVPGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 226 i~~~~~G~r~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
+.+.|+|+||++ +|..++||+.+ +|+|+++|++|+ ++++|++|++++++|+
T Consensus 345 i~~~w~G~r~~t-----~D~~P~ig~~~----~gl~~a~G~~g~-~~~ap~~a~~la~~i~ 395 (405)
T 3c4n_A 345 VPGAWLALPGGR-----PDAPPQAEELA----PGLHLLLGGPLA-DTLGLAAAHELAQRVS 395 (405)
T ss_dssp SCEEEEEEGGGC-----TTCCCEEEEEE----TTEEEEECCTTH-HHHHHHHHHHHHHHHH
T ss_pred eeeEEEeecCcC-----CCCCCEecccC----CCeEEEEccCcH-HHHHHHHHHHHHHHHh
Confidence 888999999994 56778999875 799999999876 5999999999999985
No 18
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.93 E-value=2.9e-25 Score=211.03 Aligned_cols=241 Identities=15% Similarity=0.144 Sum_probs=185.7
Q ss_pred eeeeCHHHHHhhC--CCcc--cceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEec---CC
Q 023079 12 LRMLEGFEAMKME--PELQ--CVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYIS---ES 84 (287)
Q Consensus 12 ~~~L~~~ei~~~~--P~l~--~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~---~g 84 (287)
.++|+++++.+++ |.+. ..+|++. .+|++||.+++.+|++.|+++|++++++++|+++..+++.|.|++. +|
T Consensus 114 ~~~l~~~~~~~~~~~P~l~~~~~~~~~~-~~g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G 192 (501)
T 2qcu_A 114 RTSLPGSTGLRFGANSVLKPEIKRGFEY-SDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTG 192 (501)
T ss_dssp CSSSCCCEEEECCTTSSBCTTCCEEEEE-EEEEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTC
T ss_pred cEEECHHHHHHhhcCCCcchhceEEEEe-eCCEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCC
Confidence 6788888888888 9875 4566665 5889999999999999999999999999999999988777778774 34
Q ss_pred cccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHH-hCCC-CCcccCCccccceEEEEEcCCCCCCCCceeeeCCCCC
Q 023079 85 KNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKR-FIGL-DNVFIPPAYYARGCYFSLANTKVAPFKHLIYPIPEDG 162 (287)
Q Consensus 85 ~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~-~~~~-~~~~~p~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~ 162 (287)
++.+++||.||||+|+|+..+.+. ++.. ..++.| .+|++++++.... .....+++.+ .
T Consensus 193 -------------~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~~~i~p----~rG~~~~~~~~~~-~~~~~~~~~~--d 252 (501)
T 2qcu_A 193 -------------KKYSWQARGLVNATGPWVKQFFDDGMHLPSPYGIRL----IKGSHIVVPRVHT-QKQAYILQNE--D 252 (501)
T ss_dssp -------------CEEEEEESCEEECCGGGHHHHHHHHTCCCCSSCBCC----EEEEEEEEECSSS-CSCEEEEECT--T
T ss_pred -------------CEEEEECCEEEECCChhHHHHHHHhccCCccccccc----ceeEEEEECCCCC-CceEEEeecC--C
Confidence 234799999999999999999885 4322 244566 9999999874321 1122344422 2
Q ss_pred CceeEEeeecCCcEEECCCccccCCcccccccccccccCCChhhHHHHHHHHhhhCC-CCCCCCcccccccccceecCC-
Q 023079 163 GLGVHVTLDLDGQIKFGPDVEWIDGIDDTLSFLNRFDYSVNANRAERFYPEIRKYYP-DLRDGSLQPSYAGIRPKLSGP- 240 (287)
Q Consensus 163 ~~~~~~~~~~~g~l~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~i~~~~~G~r~~~~~~- 240 (287)
+..++++|..+|.+++|++.+..+. ++.+...+++.++.+++.++++|| .+...++.+.|+|+||+..+.
T Consensus 253 g~~~~~~P~~~g~~~iG~t~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~~p~~l~~~~v~~~~aG~Rp~~~d~~ 324 (501)
T 2qcu_A 253 KRIVFVIPWMDEFSIIGTTDVEYKG--------DPKAVKIEESEINYLLNVYNTHFKKQLSRDDIVWTYSGVRPLCDDES 324 (501)
T ss_dssp SCEEEEEEETTTEEEEECCCEECCS--------CGGGCCCCHHHHHHHHHHHHHHBSSCCCGGGCCEEEEEEECCBCCCC
T ss_pred CCEEEEEEcCCCcEEEcCCCCCCCC--------CcCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEEEEEEeeecCCCC
Confidence 4568889988889999988764321 234556778899999999999999 899889999999999998762
Q ss_pred ---CCCCCCeEEe--cCCCCCCCCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 241 ---RQSPIDFVIQ--GDDTHGVPGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 241 ---~~~~~~~~i~--~~~~~~~~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
+...++++|. ... +.+|++.++|. |+|++|.+|+.+++++.
T Consensus 325 p~~~~~~~~~~i~~~~~~--~~~gl~~i~Gg---~~t~~~~~Ae~~~~~~~ 370 (501)
T 2qcu_A 325 DSPQAITRDYTLDIHDEN--GKAPLLSVFGG---KLTTYRKLAEHALEKLT 370 (501)
T ss_dssp SSGGGSCCCCEEEEEEET--TEEEEEEEECC---CGGGHHHHHHHHHHHHG
T ss_pred CccccCcCceEEEecccC--CCCCeEEEeCc---cccchHHHHHHHHHHHH
Confidence 2224577765 322 34689988875 79999999999999875
No 19
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.92 E-value=5e-25 Score=200.52 Aligned_cols=218 Identities=21% Similarity=0.161 Sum_probs=164.4
Q ss_pred hhcCCCeeeeeCHHHHHhhCCCcccceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCC
Q 023079 5 TANGVHGLRMLEGFEAMKMEPELQCVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISES 84 (287)
Q Consensus 5 ~~~g~~~~~~L~~~ei~~~~P~l~~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g 84 (287)
++.|.+ +++++++++ |. ...|++. .++++||.+++.+|++.|+++|++|++ ++|+++... -
T Consensus 111 ~~~g~~-~~~l~~~~~----p~--~~~g~~~-~~~~v~p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~~----------~ 171 (363)
T 1c0p_A 111 KDITPN-YRPLPSSEC----PP--GAIGVTY-DTLSVHAPKYCQYLARELQKLGATFER-RTVTSLEQA----------F 171 (363)
T ss_dssp TTTSTT-CEECCGGGS----ST--TCEEEEE-EEEECCHHHHHHHHHHHHHHTTCEEEE-CCCSBGGGT----------C
T ss_pred HHhCCC-cEECCHHHC----CC--ceEEEEE-ecceecHHHHHHHHHHHHHHCCCEEEE-EEcccHhhc----------C
Confidence 445665 788887766 42 2356776 889999999999999999999999998 888877431 1
Q ss_pred cccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHhCCCCCcccCCccccceEEEEEcCCCCCCCCceeeeCCCCCCc
Q 023079 85 KNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRFIGLDNVFIPPAYYARGCYFSLANTKVAPFKHLIYPIPEDGGL 164 (287)
Q Consensus 85 ~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~ 164 (287)
+ +||+||+|+|+|+..+... ...++.| .+|+++.++... .+.. ++.... ..
T Consensus 172 ----------------~-~a~~VV~A~G~~s~~l~~~---~~~~~~p----~rg~~~~~~~~~--~~~~--~~~~~~-~~ 222 (363)
T 1c0p_A 172 ----------------D-GADLVVNATGLGAKSIAGI---DDQAAEP----IRGQTVLVKSPC--KRCT--MDSSDP-AS 222 (363)
T ss_dssp ----------------S-SCSEEEECCGGGGGTSBTT---CCTTEEE----EEEEEEEEECCC--CCCE--EECSCT-TC
T ss_pred ----------------c-CCCEEEECCCcchhhccCc---ccCCccc----cCCeEEEEeCCc--ccce--EeeccC-CC
Confidence 3 6999999999999987643 2334455 999999887642 2221 222211 13
Q ss_pred eeEEeeecCCcEEECCCccccCCcccccccccccccCCChhhHHHHHHHHhhhCCCC------CCCCcccccccccceec
Q 023079 165 GVHVTLDLDGQIKFGPDVEWIDGIDDTLSFLNRFDYSVNANRAERFYPEIRKYYPDL------RDGSLQPSYAGIRPKLS 238 (287)
Q Consensus 165 ~~~~~~~~~g~l~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l------~~~~i~~~~~G~r~~~~ 238 (287)
+.|++|..+|++++|++.+.. .++...+.+..+.+++.+.++||.+ .+.++.+.|+|+||+++
T Consensus 223 ~~y~~p~~~g~~~iG~t~~~~-----------~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~~~~~i~~~w~G~rp~t~ 291 (363)
T 1c0p_A 223 PAYIIPRPGGEVICGGTYGVG-----------DWDLSVNPETVQRILKHCLRLDPTISSDGTIEGIEVLRHNVGLRPARR 291 (363)
T ss_dssp CEEEEEETTTEEEEECCCEET-----------CCCCSCCHHHHHHHHHHHHHHCGGGSSSSSGGGCEEEEEEEEEEEEET
T ss_pred cEEEEEcCCCEEEEEeeeccC-----------CCCCCCCHHHHHHHHHHHHHhCccccCCcccccceEeeceEEECCCCC
Confidence 388999888999999886542 2344566788899999999999998 44788999999999954
Q ss_pred CCCCCCCCeEEecC-C------------------CCCC--CCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 239 GPRQSPIDFVIQGD-D------------------THGV--PGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 239 ~~~~~~~~~~i~~~-~------------------~~~~--~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
|..+++++. + .++. +|+|+++|++|+||+++|++|++++++|.
T Consensus 292 -----d~~piig~~~~~~~~~~~~~~d~~~~~g~~p~~~~~~~~~a~G~~g~G~~~a~~~g~~~a~li~ 355 (363)
T 1c0p_A 292 -----GGPRVEAERIVLPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGFSSAGYQQSWGAAEDVAQLVD 355 (363)
T ss_dssp -----TSCEEEEEEEEESCCTTTCTTCSSCTTCCCSCCEEEEEEEEECCTTCHHHHHHHHHHHHHHHHH
T ss_pred -----CCceeEEEecccccccccCccccccccccccccccceEEEecCCCCcchheeccHHHHHHHHHH
Confidence 556776652 0 0134 79999999999999999999999999875
No 20
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.01 E-value=2.8e-09 Score=96.95 Aligned_cols=212 Identities=13% Similarity=0.118 Sum_probs=121.6
Q ss_pred ceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEE-EEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 38 SGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMN-VYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 38 ~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~-V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
...++...+...|.+.+++.|++++.+++|+++..+++++. |++.+... ..+++||.||.|+|.|+
T Consensus 96 ~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~------------~~~~~a~~vV~A~G~~s- 162 (397)
T 3cgv_A 96 GYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNE------------IVDVRAKMVIAADGFES- 162 (397)
T ss_dssp EEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTE------------EEEEEEEEEEECCCTTC-
T ss_pred eEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCe------------EEEEEcCEEEECCCcch-
Confidence 55788999999999999999999999999999998888876 77632211 13799999999999999
Q ss_pred HHHHHhCCCCC-cccCCccccceEEEEEcCCCCCCCCceeeeCC-CCCCceeEEeeecCCcEEECCCccccCCccccccc
Q 023079 117 ALAKRFIGLDN-VFIPPAYYARGCYFSLANTKVAPFKHLIYPIP-EDGGLGVHVTLDLDGQIKFGPDVEWIDGIDDTLSF 194 (287)
Q Consensus 117 ~l~~~~~~~~~-~~~p~~~~~~g~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~g~l~iG~~~~~~~~~~~~~~~ 194 (287)
.+.+.+ +.+. ...| .....+....+......+-...++.-. .+ +.-.++.|..++.+.+|......
T Consensus 163 ~~~~~~-g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~P~~~~~~~vg~~~~~~--------- 230 (397)
T 3cgv_A 163 EFGRWA-GLKSVILAR-NDIISALQYRMINVDVDPDYTDFYLGSIAP-AGYIWVFPKGEGMANVGIGSSIN--------- 230 (397)
T ss_dssp HHHHHH-TCCTTCCCG-GGEEEEEEEEEESCCCCTTEEEEECSTTST-TEEEEEEEEETTEEEEEEEEETT---------
T ss_pred HhHHhc-CCCccCCCh-hheeEEEEEEeccCCCCCCcEEEEeCCcCC-CceEEEEECCCCeEEEEEEeccc---------
Confidence 677777 3333 2212 111222223332211111000111110 11 12256678777776666332210
Q ss_pred ccccccCCChhhHHHHHHHHhhhCCCCCCCCcccccccccceecCCC--CCCCCeEEecCCCCCCCCeEEEeCCCCchhh
Q 023079 195 LNRFDYSVNANRAERFYPEIRKYYPDLRDGSLQPSYAGIRPKLSGPR--QSPIDFVIQGDDTHGVPGLVNLFGIESPGLT 272 (287)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~i~~~~~G~r~~~~~~~--~~~~~~~i~~~~~~~~~~l~~~~G~~g~G~t 272 (287)
. .......+..++.+.+.+|.+...++...|.|..|+..... ..++-+++|..- + .+..+.|.|+.
T Consensus 231 --~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~liGDAa-----~--~~~P~~G~G~~ 298 (397)
T 3cgv_A 231 --W---IHNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAA-----R--LIDPITGGGIA 298 (397)
T ss_dssp --T---CSCHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCSCCEETTEEECGGGG-----T--CSCTTTCCCHH
T ss_pred --c---ccCCCCHHHHHHHHHHhCcCCCCCeEEeeeeeeeecCCCccceeeCCEEEEEccc-----c--CCCCCCCCCHH
Confidence 0 11223344455555555565666677777888777621110 011222344432 1 12345678899
Q ss_pred hhHHHHHHHHHHHh
Q 023079 273 SSMAIAEYVAAKFL 286 (287)
Q Consensus 273 ~ap~~g~~va~~i~ 286 (287)
++..-|..+++.|.
T Consensus 299 ~a~~~a~~la~~l~ 312 (397)
T 3cgv_A 299 NAIVSGMYAAQVTK 312 (397)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99888887777653
No 21
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.77 E-value=9.4e-08 Score=87.72 Aligned_cols=72 Identities=13% Similarity=0.188 Sum_probs=60.3
Q ss_pred CceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeE--EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 37 ASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCM--NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 37 ~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~--~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
....+++..+...|.+.|++.|++++++++|+++..+++++ .|++.+|. +.+++||.||+|+|.+
T Consensus 99 ~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~-------------~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 99 WTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGN-------------KREIEARFIIDASGYG 165 (421)
T ss_dssp CEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSC-------------EEEEEEEEEEECCGGG
T ss_pred ceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCC-------------EEEEEcCEEEECCCCc
Confidence 34578999999999999999999999999999999887764 56677772 2359999999999999
Q ss_pred chHHHHHh
Q 023079 115 APALAKRF 122 (287)
Q Consensus 115 s~~l~~~~ 122 (287)
+ .+.+.+
T Consensus 166 s-~l~~~~ 172 (421)
T 3nix_A 166 R-VIPRMF 172 (421)
T ss_dssp C-HHHHHT
T ss_pred h-hhHHhc
Confidence 8 666666
No 22
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.73 E-value=1.9e-07 Score=85.68 Aligned_cols=69 Identities=16% Similarity=0.173 Sum_probs=58.5
Q ss_pred ceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEE-EEecCCcccccCCCCCCCCCceeEecCEEE
Q 023079 30 VKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMN-VYISESKNLRNWDGVSPLQPELTLIPKLVV 108 (287)
Q Consensus 30 ~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~-V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV 108 (287)
.++.+.+.+| ...++.+|++.++++|++|+++++|++|..+++++. |+++.+ +++||.||
T Consensus 185 ~~~~~~~~gG---~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~g~----------------~~~ad~VV 245 (425)
T 3ka7_A 185 FGGTGIPEGG---CKGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIADDR----------------IHDADLVI 245 (425)
T ss_dssp HCSCEEETTS---HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE----------------EEECSEEE
T ss_pred cCCccccCCC---HHHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEECCE----------------EEECCEEE
Confidence 3566677776 477999999999999999999999999999888886 777633 79999999
Q ss_pred EcCCCCchH
Q 023079 109 NSAGLSAPA 117 (287)
Q Consensus 109 ~aaG~~s~~ 117 (287)
+|+|+|...
T Consensus 246 ~a~~~~~~~ 254 (425)
T 3ka7_A 246 SNLGHAATA 254 (425)
T ss_dssp ECSCHHHHH
T ss_pred ECCCHHHHH
Confidence 999998654
No 23
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.63 E-value=4e-07 Score=86.01 Aligned_cols=205 Identities=10% Similarity=0.020 Sum_probs=114.3
Q ss_pred CCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCe--EEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 36 PASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNC--MNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 36 p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~--~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
+.+..+++..+...|.+.|++.|++++++ +|+++..++++ +.|++.+|. +++||.||.|+|.
T Consensus 165 ~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~---------------~~~ad~vV~A~G~ 228 (511)
T 2weu_A 165 PYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHG---------------EISGDLFVDCTGF 228 (511)
T ss_dssp SCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSC---------------EEECSEEEECCGG
T ss_pred CeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCC---------------EEEcCEEEECCCc
Confidence 45668999999999999999999999999 99999885444 568888772 7999999999999
Q ss_pred CchHHHHHhCCCCCcccCCccccceEE-EEEcCCCCCCCCceeeeCCCCCCceeEEeeecCCcEEECCCccccCCccccc
Q 023079 114 SAPALAKRFIGLDNVFIPPAYYARGCY-FSLANTKVAPFKHLIYPIPEDGGLGVHVTLDLDGQIKFGPDVEWIDGIDDTL 192 (287)
Q Consensus 114 ~s~~l~~~~~~~~~~~~p~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~l~iG~~~~~~~~~~~~~ 192 (287)
||..+.+.+ +......++..+....+ +.+.................+.+ -.++.|..+ +..+|.... .
T Consensus 229 ~S~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~P~~~-~~~~g~~~~--~------ 297 (511)
T 2weu_A 229 RGLLINQTL-GGRFQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAG-WMWTIPLFK-RDGNGYVYS--D------ 297 (511)
T ss_dssp GCCCCCCCT-CCCEEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTE-EEEEEECSS-EEEEEEEEC--T------
T ss_pred chHHHHHHh-CCCCccccccCcccceEEEEeccCCCCCCCcceeceecCCC-cEEEEECCC-ceEEEEEEC--C------
Confidence 987655444 33221100011132222 22221100001110000001111 134455433 444442110 0
Q ss_pred ccccccccCCChhh-HHHHHHHHhhhCCCCCCCCcccccccccceecCCCCCCCCeEEecCCCCCCCCeEEEeCCCCchh
Q 023079 193 SFLNRFDYSVNANR-AERFYPEIRKYYPDLRDGSLQPSYAGIRPKLSGPRQSPIDFVIQGDDTHGVPGLVNLFGIESPGL 271 (287)
Q Consensus 193 ~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~~~~i~~~~~G~r~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~G~~g~G~ 271 (287)
. ..+.+. .+.+.+.+ ...|.+.+..+...|.|.++... .++-+++|..- + .+..++|.|+
T Consensus 298 ------~-~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~rv~liGDAA-----h--~~~P~~g~G~ 358 (511)
T 2weu_A 298 ------E-FISPEEAERELRSTV-APGRDDLEANHIQMRIGRNERTW----INNCVAVGLSA-----A--FVEPLESTGI 358 (511)
T ss_dssp ------T-TSCHHHHHHHHHHHH-CTTCTTSCCEEEECCCEEESCSE----ETTEEECGGGT-----E--ECCGGGCCHH
T ss_pred ------C-CCCHHHHHHHHHHHh-CcccccccceeEEeecccccccc----CCCEEEEechh-----h--ccCccccccH
Confidence 0 112222 23333333 33455555566677777765422 12334566543 2 2334567899
Q ss_pred hhhHHHHHHHHHHHh
Q 023079 272 TSSMAIAEYVAAKFL 286 (287)
Q Consensus 272 t~ap~~g~~va~~i~ 286 (287)
.++...|..+++.|.
T Consensus 359 ~~a~~da~~La~~l~ 373 (511)
T 2weu_A 359 FFIQHAIEQLVKHFP 373 (511)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998764
No 24
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.47 E-value=1.1e-06 Score=80.76 Aligned_cols=71 Identities=8% Similarity=0.029 Sum_probs=58.7
Q ss_pred ceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEE
Q 023079 30 VKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVN 109 (287)
Q Consensus 30 ~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~ 109 (287)
.++.+.|.+| +..++.+|++.++++|++|+++++|++|..++++| |.++.+ +++||.||+
T Consensus 178 ~~g~~~~~gG---~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V~~~g~----------------~~~ad~Vv~ 237 (421)
T 3nrn_A 178 WGGPGLIRGG---CKAVIDELERIIMENKGKILTRKEVVEINIEEKKV-YTRDNE----------------EYSFDVAIS 237 (421)
T ss_dssp HCSCEEETTC---HHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-EETTCC----------------EEECSEEEE
T ss_pred cCCcceecCC---HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-EEeCCc----------------EEEeCEEEE
Confidence 3566777777 68899999999999999999999999999888888 755433 899999999
Q ss_pred cCCCCchHHHHHh
Q 023079 110 SAGLSAPALAKRF 122 (287)
Q Consensus 110 aaG~~s~~l~~~~ 122 (287)
|+|+|.. .+++
T Consensus 238 a~~~~~~--~~ll 248 (421)
T 3nrn_A 238 NVGVRET--VKLI 248 (421)
T ss_dssp CSCHHHH--HHHH
T ss_pred CCCHHHH--HHhc
Confidence 9998753 3455
No 25
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.37 E-value=1.1e-06 Score=84.86 Aligned_cols=73 Identities=18% Similarity=0.308 Sum_probs=59.9
Q ss_pred CCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEe-CCeEEEEec-CCcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 36 PASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLE-GNCMNVYIS-ESKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 36 p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~-~~~~~V~t~-~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
+.+..++...+...|.+.|++.|++++++++|+++..+ ++.+.|++. +|. +.+++||.||.|+|.
T Consensus 120 ~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~-------------~~~i~AdlVV~AdG~ 186 (591)
T 3i3l_A 120 DHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGE-------------SVTVESDFVIDAGGS 186 (591)
T ss_dssp SCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTE-------------EEEEEESEEEECCGG
T ss_pred CeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCc-------------eEEEEcCEEEECCCC
Confidence 44568899999999999999999999999999999876 456778776 441 237999999999999
Q ss_pred CchHHHHHh
Q 023079 114 SAPALAKRF 122 (287)
Q Consensus 114 ~s~~l~~~~ 122 (287)
++. +.+.+
T Consensus 187 ~S~-lr~~l 194 (591)
T 3i3l_A 187 GGP-ISRKL 194 (591)
T ss_dssp GCH-HHHHH
T ss_pred cch-hHHHc
Confidence 875 55556
No 26
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.30 E-value=2.3e-05 Score=72.74 Aligned_cols=70 Identities=19% Similarity=0.277 Sum_probs=56.5
Q ss_pred eeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEE-EEec---CCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 39 GIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMN-VYIS---ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 39 g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~-V~t~---~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
..++...+...|.+.+.+.|++++.+++|+++..+++++. |++. +|. ..+++||.||.|+|.+
T Consensus 95 ~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~-------------~~~~~ad~VV~AdG~~ 161 (453)
T 3atr_A 95 FELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNE-------------ELTVYSKVVVEATGYS 161 (453)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTE-------------EEEEECSEEEECCGGG
T ss_pred EEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCc-------------eEEEEcCEEEECcCCc
Confidence 3578899999999999999999999999999998877754 5443 441 2379999999999999
Q ss_pred chHHHHHh
Q 023079 115 APALAKRF 122 (287)
Q Consensus 115 s~~l~~~~ 122 (287)
+. +.+.+
T Consensus 162 s~-vr~~l 168 (453)
T 3atr_A 162 RS-FRSKL 168 (453)
T ss_dssp CT-TGGGS
T ss_pred hh-hHHhc
Confidence 86 44555
No 27
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.28 E-value=1e-05 Score=77.68 Aligned_cols=74 Identities=12% Similarity=0.137 Sum_probs=61.5
Q ss_pred ceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEe--cCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 38 SGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYI--SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 38 ~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t--~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
...++...+...|.+.+++.|++|+++++|++++.+++++.|++ .+|. .+++||.||.|.|.+|
T Consensus 142 ~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~--------------~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 142 TGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGP--------------YPVRARYGVGCDGGRS 207 (570)
T ss_dssp BBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEE--------------EEEEESEEEECSCSSC
T ss_pred eEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCc--------------EEEEeCEEEEcCCCCc
Confidence 44688999999999999989999999999999998888888776 5551 2799999999999999
Q ss_pred hHHHHHhCCCCC
Q 023079 116 PALAKRFIGLDN 127 (287)
Q Consensus 116 ~~l~~~~~~~~~ 127 (287)
.+.+.+ ++..
T Consensus 208 -~vR~~l-Gi~~ 217 (570)
T 3fmw_A 208 -TVRRLA-ADRF 217 (570)
T ss_dssp -HHHHHT-TCCC
T ss_pred -hHHHHc-CCCC
Confidence 676777 4443
No 28
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.26 E-value=1.4e-05 Score=71.93 Aligned_cols=209 Identities=13% Similarity=0.117 Sum_probs=109.3
Q ss_pred eecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEE-EEe-cCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 40 IVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMN-VYI-SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~-V~t-~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
.++-..+-..|.+.|.+.|++++.+++|+++..+++.+. +.. .++ ...+++||.||.|.|.+|.
T Consensus 98 ~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~-------------~~~~~~a~~vIgAdG~~S~- 163 (397)
T 3oz2_A 98 VLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNN-------------EIVDVRAKMVIAADGFESE- 163 (397)
T ss_dssp EECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETT-------------EEEEEEEEEEEECCCTTCH-
T ss_pred EEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccc-------------cceEEEEeEEEeCCccccH-
Confidence 578888999999999999999999999999998887764 332 222 1347999999999999875
Q ss_pred HHHHhCCCCCcccCCccc-cceEEEEEcCCCCCCCCceeeeCCCCCCceeEEeeecCCcEEECCCccccCCccccccccc
Q 023079 118 LAKRFIGLDNVFIPPAYY-ARGCYFSLANTKVAPFKHLIYPIPEDGGLGVHVTLDLDGQIKFGPDVEWIDGIDDTLSFLN 196 (287)
Q Consensus 118 l~~~~~~~~~~~~p~~~~-~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~l~iG~~~~~~~~~~~~~~~~~ 196 (287)
+.+.+ +......+.... ...++....... .+-...++........-..+.|..++...+|.....
T Consensus 164 vr~~~-g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~------------ 229 (397)
T 3oz2_A 164 FGRWA-GLKSVILARNDIISALQYRMINVDV-DPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSI------------ 229 (397)
T ss_dssp HHHHH-TCGGGCCCGGGEEEEEEEEEESCCC-CTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEET------------
T ss_pred HHHHc-CCCcccccceeeeeeEEEEeecccc-CcccceeeeeccCCCceEEEeecccceeEEEEeecc------------
Confidence 44555 332221110000 011111111111 110011111111111113446655665555421110
Q ss_pred ccccCCChhhHHHHHHHHhhhCCCCCCCCcccccccccceecCCC--CCCCCeEEecCCCCCCCCeEEEeCCCCchhhhh
Q 023079 197 RFDYSVNANRAERFYPEIRKYYPDLRDGSLQPSYAGIRPKLSGPR--QSPIDFVIQGDDTHGVPGLVNLFGIESPGLTSS 274 (287)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~P~l~~~~i~~~~~G~r~~~~~~~--~~~~~~~i~~~~~~~~~~l~~~~G~~g~G~t~a 274 (287)
+...........++.+.+.+|.+........+.|..|...... ..++-+++|-.- |. +.-++|.|+.+|
T Consensus 230 --~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA-~~------~~P~~G~Gi~~A 300 (397)
T 3oz2_A 230 --NWIHNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAA-RL------IDPITGGGIANA 300 (397)
T ss_dssp --TTSCSHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCSCCEETTEEECGGGG-TC------SCTTTCCCHHHH
T ss_pred --chhhhhhhHHHHHHHHHHhCccccccceeeeeeccccccCcccceeeeeEEEccccc-cc------CCCCcchhHHHH
Confidence 1111233445556666666676666655666666555422110 001122344331 11 122456788888
Q ss_pred HHHHHHHHHHH
Q 023079 275 MAIAEYVAAKF 285 (287)
Q Consensus 275 p~~g~~va~~i 285 (287)
..-|+.+|+.|
T Consensus 301 ~~~g~~~A~~i 311 (397)
T 3oz2_A 301 IVSGMYAAQVT 311 (397)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88777777765
No 29
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.20 E-value=2.1e-05 Score=75.07 Aligned_cols=71 Identities=17% Similarity=0.148 Sum_probs=59.2
Q ss_pred CCceeecHHHHHHHHHHHHHHC-CcEEEcCceeEEEEEeCCe--EEEEecCCcccccCCCCCCCCCceeEecCEEEEcCC
Q 023079 36 PASGIVDSHSLMLSLVGEAENH-GTTFSNNTSVIGGHLEGNC--MNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAG 112 (287)
Q Consensus 36 p~~g~vdp~~l~~~l~~~a~~~-Gv~~~~~~~V~~i~~~~~~--~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG 112 (287)
+.+..+++..+...|.+.+++. |++++++ +|+++..++++ +.|++.+|. +++||.||+|+|
T Consensus 186 ~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~---------------~i~ad~vI~A~G 249 (550)
T 2e4g_A 186 NYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGR---------------VFDADLFVDCSG 249 (550)
T ss_dssp CCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSC---------------EEECSEEEECCG
T ss_pred CcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCC---------------EEECCEEEECCC
Confidence 3456799999999999999998 9999999 99999876543 568888772 799999999999
Q ss_pred CCchHHHHHh
Q 023079 113 LSAPALAKRF 122 (287)
Q Consensus 113 ~~s~~l~~~~ 122 (287)
.++..+.+.+
T Consensus 250 ~~S~~~~~~l 259 (550)
T 2e4g_A 250 FRGLLINKAM 259 (550)
T ss_dssp GGCCCCCCCT
T ss_pred CchhhHHHHh
Confidence 9987655555
No 30
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.18 E-value=6.9e-05 Score=70.67 Aligned_cols=75 Identities=20% Similarity=0.170 Sum_probs=61.6
Q ss_pred ceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 38 SGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 38 ~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
...++...+...|.+.+.+.|++++++++|++++.+++++.|++.++. + +.+++||.||.|.|++|.
T Consensus 101 ~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~-----------g-~~~~~a~~vVgADG~~S~- 167 (499)
T 2qa2_A 101 VKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPD-----------G-PRSLTTRYVVGCDGGRST- 167 (499)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSS-----------C-EEEEEEEEEEECCCTTCH-
T ss_pred eEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCC-----------C-cEEEEeCEEEEccCcccH-
Confidence 356788899999999999999999999999999988888888877662 1 247999999999999986
Q ss_pred HHHHhCCCC
Q 023079 118 LAKRFIGLD 126 (287)
Q Consensus 118 l~~~~~~~~ 126 (287)
+.+.+ ++.
T Consensus 168 VR~~l-g~~ 175 (499)
T 2qa2_A 168 VRKAA-GFD 175 (499)
T ss_dssp HHHHT-TCC
T ss_pred HHHHc-CCC
Confidence 55666 443
No 31
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.12 E-value=9.2e-05 Score=69.80 Aligned_cols=75 Identities=19% Similarity=0.186 Sum_probs=61.2
Q ss_pred ceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 38 SGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 38 ~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
...++...+...|.+.+++.|++++++++|++++.+++++.|++.++.+ +.+++||+||.|.|.+|.
T Consensus 100 ~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g------------~~~~~a~~vVgADG~~S~- 166 (500)
T 2qa1_A 100 AKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEG------------KHTLRAAYLVGCDGGRSS- 166 (500)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTE------------EEEEEESEEEECCCTTCH-
T ss_pred eeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCC------------CEEEEeCEEEECCCcchH-
Confidence 3567788899999999999999999999999999988888887766521 237999999999999985
Q ss_pred HHHHhCCCC
Q 023079 118 LAKRFIGLD 126 (287)
Q Consensus 118 l~~~~~~~~ 126 (287)
+.+.+ +..
T Consensus 167 VR~~l-g~~ 174 (500)
T 2qa1_A 167 VRKAA-GFD 174 (500)
T ss_dssp HHHHT-TCC
T ss_pred HHHHc-CCC
Confidence 65666 444
No 32
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.09 E-value=4.1e-05 Score=72.75 Aligned_cols=73 Identities=18% Similarity=0.196 Sum_probs=61.1
Q ss_pred EcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCe--EEEEecCCcccccCCCCCCCCCceeEecCEEEEcC
Q 023079 34 LSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNC--MNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSA 111 (287)
Q Consensus 34 ~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~--~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aa 111 (287)
+.+.++.+++..+...|.+.|++.|++++.+ +|+++...+++ +.|++.+|. +++||.||.|+
T Consensus 155 ~~~~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~---------------~i~ad~vV~A~ 218 (538)
T 2aqj_A 155 QMSHAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGR---------------TLEADLFIDCS 218 (538)
T ss_dssp CSCCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSC---------------EECCSEEEECC
T ss_pred CCCccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCc---------------EEEeCEEEECC
Confidence 4567789999999999999999999999999 89999876443 568888772 79999999999
Q ss_pred CCCchHHHHHh
Q 023079 112 GLSAPALAKRF 122 (287)
Q Consensus 112 G~~s~~l~~~~ 122 (287)
|.++..+.+.+
T Consensus 219 G~~s~~~~~~l 229 (538)
T 2aqj_A 219 GMRGLLINQAL 229 (538)
T ss_dssp GGGCCCCCCCT
T ss_pred CCchhhHHHHh
Confidence 99987655444
No 33
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.07 E-value=7.8e-05 Score=70.68 Aligned_cols=75 Identities=15% Similarity=0.254 Sum_probs=62.0
Q ss_pred ceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCC----eEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 38 SGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGN----CMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 38 ~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~----~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
...++...+...|.+.++++|++++++++|++++.+++ ++.|++.++.+ ..+++||.||.|.|.
T Consensus 114 ~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~------------~~~i~a~~vV~AdG~ 181 (535)
T 3ihg_A 114 WAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDG------------EYDLRAGYLVGADGN 181 (535)
T ss_dssp CBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTE------------EEEEEEEEEEECCCT
T ss_pred ccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCC------------eEEEEeCEEEECCCC
Confidence 45678889999999999999999999999999999887 88877765411 238999999999999
Q ss_pred CchHHHHHhCCCC
Q 023079 114 SAPALAKRFIGLD 126 (287)
Q Consensus 114 ~s~~l~~~~~~~~ 126 (287)
+| .+.+.+ ++.
T Consensus 182 ~S-~vR~~l-gi~ 192 (535)
T 3ihg_A 182 RS-LVRESL-GIG 192 (535)
T ss_dssp TC-HHHHHT-TCC
T ss_pred cc-hHHHHc-CCC
Confidence 98 777777 344
No 34
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.02 E-value=1.4e-05 Score=73.67 Aligned_cols=67 Identities=18% Similarity=0.175 Sum_probs=59.8
Q ss_pred ecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc-----
Q 023079 41 VDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA----- 115 (287)
Q Consensus 41 vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s----- 115 (287)
.++..+...|.+.+++.|++++++++|+++..++++|.|++.+| +++||.||+|+|.|+
T Consensus 129 ~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g----------------~i~ad~VIlAtG~~S~p~~g 192 (417)
T 3v76_A 129 HSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG----------------TVDAASLVVASGGKSIPKMG 192 (417)
T ss_dssp SCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE----------------EEEESEEEECCCCSSCGGGT
T ss_pred CCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc----------------EEEeeEEEECCCCccCCCCC
Confidence 46788999999999999999999999999999888899999888 899999999999998
Q ss_pred -----hHHHHHhC
Q 023079 116 -----PALAKRFI 123 (287)
Q Consensus 116 -----~~l~~~~~ 123 (287)
..+++.++
T Consensus 193 s~g~g~~la~~~G 205 (417)
T 3v76_A 193 ATGLAYRIAEQFG 205 (417)
T ss_dssp CCCHHHHHHHHTT
T ss_pred CCcHHHHHHHHCC
Confidence 46777763
No 35
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.93 E-value=0.00013 Score=67.42 Aligned_cols=55 Identities=20% Similarity=0.211 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
..++.+|++.+.+ ++|+++++|++|+.++++|.|+|++|. +++||+||+|++++.
T Consensus 235 ~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~~~v~~~~g~---------------~~~ad~vi~a~p~~~ 289 (470)
T 3i6d_A 235 QTLVEEIEKQLKL--TKVYKGTKVTKLSHSGSCYSLELDNGV---------------TLDADSVIVTAPHKA 289 (470)
T ss_dssp HHHHHHHHHTCCS--EEEECSCCEEEEEECSSSEEEEESSSC---------------EEEESEEEECSCHHH
T ss_pred HHHHHHHHHhcCC--CEEEeCCceEEEEEcCCeEEEEECCCC---------------EEECCEEEECCCHHH
Confidence 4556665544322 799999999999998888999998883 799999999999875
No 36
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.92 E-value=0.00025 Score=68.14 Aligned_cols=79 Identities=15% Similarity=0.168 Sum_probs=56.2
Q ss_pred ceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCC-eEE-EEecC------CcccccCCCCCCCCCceeEecCEEEE
Q 023079 38 SGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGN-CMN-VYISE------SKNLRNWDGVSPLQPELTLIPKLVVN 109 (287)
Q Consensus 38 ~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~-~~~-V~t~~------g~~~~~~~~~~~~~~~~~i~a~~VV~ 109 (287)
...++...+...|.+.|++.|++|+.+++|+++..+++ .+. |++.+ |.... --+...+++||.||.
T Consensus 138 ~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~------~~~~g~~i~Ad~VV~ 211 (584)
T 2gmh_A 138 NYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKT------TFERGLELHAKVTIF 211 (584)
T ss_dssp CEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEE------EEECCCEEECSEEEE
T ss_pred CEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCccc------ccCCceEEECCEEEE
Confidence 34567789999999999999999999999999988753 453 77753 31000 000002799999999
Q ss_pred cCCCCch---HHHHHh
Q 023079 110 SAGLSAP---ALAKRF 122 (287)
Q Consensus 110 aaG~~s~---~l~~~~ 122 (287)
|.|.++. .+.+.+
T Consensus 212 AdG~~S~vr~~l~~~~ 227 (584)
T 2gmh_A 212 AEGCHGHLAKQLYKKF 227 (584)
T ss_dssp CCCTTCHHHHHHHHHT
T ss_pred eeCCCchHHHHHHHHh
Confidence 9999986 444444
No 37
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.90 E-value=4.5e-05 Score=70.83 Aligned_cols=67 Identities=21% Similarity=0.179 Sum_probs=58.4
Q ss_pred cHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCe-EEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc-----
Q 023079 42 DSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNC-MNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA----- 115 (287)
Q Consensus 42 dp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~-~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s----- 115 (287)
++..++.+|.+.+++.|++++++++|+++..++++ +.|++.+|. +++||.||+|+|.|+
T Consensus 132 ~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~---------------~i~Ad~VVlAtGg~s~~~~g 196 (447)
T 2i0z_A 132 KAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGE---------------VLETNHVVIAVGGKSVPQTG 196 (447)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCC---------------EEECSCEEECCCCSSSGGGS
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCC---------------EEECCEEEECCCCCcCCCCC
Confidence 35889999999999999999999999999987776 779888772 599999999999999
Q ss_pred -----hHHHHHhC
Q 023079 116 -----PALAKRFI 123 (287)
Q Consensus 116 -----~~l~~~~~ 123 (287)
..+++.+|
T Consensus 197 ~tG~g~~la~~~G 209 (447)
T 2i0z_A 197 STGDGYAWAEKAG 209 (447)
T ss_dssp CSSHHHHHHHHTT
T ss_pred CCcHHHHHHHHCC
Confidence 57777773
No 38
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.89 E-value=3.1e-05 Score=72.52 Aligned_cols=68 Identities=16% Similarity=0.256 Sum_probs=56.2
Q ss_pred eeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEE-EEecCCcccccCCCCCCCCCceeEecCEEEE
Q 023079 31 KALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMN-VYISESKNLRNWDGVSPLQPELTLIPKLVVN 109 (287)
Q Consensus 31 ~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~-V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~ 109 (287)
.|++.|.+| ...++.+|++.++++|++|+++++|++|..+++++. |++.+|. +++||.||.
T Consensus 211 ~G~~~p~GG---~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~---------------~~~ad~VV~ 272 (501)
T 4dgk_A 211 WGVWFPRGG---TGALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGR---------------RFLTQAVAS 272 (501)
T ss_dssp CCEEEETTH---HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSC---------------EEECSCEEE
T ss_pred CCeEEeCCC---CcchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCc---------------EEEcCEEEE
Confidence 456666666 478999999999999999999999999999999876 9999883 899999999
Q ss_pred cCCCCch
Q 023079 110 SAGLSAP 116 (287)
Q Consensus 110 aaG~~s~ 116 (287)
+++++..
T Consensus 273 ~a~~~~~ 279 (501)
T 4dgk_A 273 NADVVHT 279 (501)
T ss_dssp CCC----
T ss_pred CCCHHHH
Confidence 9998754
No 39
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.88 E-value=2.7e-05 Score=71.45 Aligned_cols=66 Identities=12% Similarity=0.078 Sum_probs=57.7
Q ss_pred cHHHHHHHHHHHHHHCCcEEEcCceeEEEEEe----CCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc--
Q 023079 42 DSHSLMLSLVGEAENHGTTFSNNTSVIGGHLE----GNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA-- 115 (287)
Q Consensus 42 dp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~----~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s-- 115 (287)
++..++..|.+.+++.|++++++++|+++..+ +++|.|+++++ +++||.||+|+|.++
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g----------------~i~ad~VVlAtG~~s~p 170 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST----------------QWQCKNLIVATGGLSMP 170 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE----------------EEEESEEEECCCCSSCG
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC----------------EEECCEEEECCCCccCC
Confidence 67889999999999999999999999999876 56788988777 799999999999998
Q ss_pred --------hHHHHHhC
Q 023079 116 --------PALAKRFI 123 (287)
Q Consensus 116 --------~~l~~~~~ 123 (287)
..+++.+|
T Consensus 171 ~~g~~G~g~~la~~~G 186 (401)
T 2gqf_A 171 GLGATPFGYQIAEQFG 186 (401)
T ss_dssp GGTCCSHHHHHHHHTT
T ss_pred CCCCChHHHHHHHHCC
Confidence 46677773
No 40
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.81 E-value=0.00011 Score=66.98 Aligned_cols=67 Identities=9% Similarity=0.112 Sum_probs=57.6
Q ss_pred CCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 36 PASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 36 p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
+....++...+...|.+.+.+ ++++++++|++++.++++|.|++.+|. +++||.||.|.|.+|
T Consensus 119 ~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~---------------~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 119 SRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGS---------------SASGDLLIAADGSHS 181 (407)
T ss_dssp SCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSC---------------EEEESEEEECCCTTC
T ss_pred CceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCC---------------EEeeCEEEECCCcCh
Confidence 345578888999999988877 899999999999999899999998883 799999999999998
Q ss_pred hHHH
Q 023079 116 PALA 119 (287)
Q Consensus 116 ~~l~ 119 (287)
.--.
T Consensus 182 ~vr~ 185 (407)
T 3rp8_A 182 ALRP 185 (407)
T ss_dssp SSHH
T ss_pred HHHH
Confidence 7543
No 41
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.81 E-value=0.00014 Score=67.55 Aligned_cols=54 Identities=13% Similarity=0.057 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
..++.+|++.+.+ ++|+++++|++|+.++++|.|+|.+| +++||+||+|+++|.
T Consensus 236 ~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~~~v~~~~g----------------~~~ad~vV~a~p~~~ 289 (475)
T 3lov_A 236 ESLIERLEEVLER--SEIRLETPLLAISREDGRYRLKTDHG----------------PEYADYVLLTIPHPQ 289 (475)
T ss_dssp HHHHHHHHHHCSS--CEEESSCCCCEEEEETTEEEEECTTC----------------CEEESEEEECSCHHH
T ss_pred HHHHHHHHhhccC--CEEEcCCeeeEEEEeCCEEEEEECCC----------------eEECCEEEECCCHHH
Confidence 4556666544433 79999999999999988999999888 799999999999875
No 42
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.73 E-value=9.3e-05 Score=70.58 Aligned_cols=68 Identities=21% Similarity=0.227 Sum_probs=57.9
Q ss_pred CCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeE-EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 36 PASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCM-NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 36 p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
|..|..+...++..|.+.+++.|++++++++|+++..+++++ .|++.+|. +++||.||+|+|.|
T Consensus 212 p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~---------------~i~Ad~VVlA~G~~ 276 (549)
T 3nlc_A 212 PHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGE---------------EIKSRHVVLAVGHS 276 (549)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSC---------------EEECSCEEECCCTT
T ss_pred cccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCC---------------EEECCEEEECCCCC
Confidence 444566778899999999999999999999999999887765 58888872 79999999999999
Q ss_pred chHH
Q 023079 115 APAL 118 (287)
Q Consensus 115 s~~l 118 (287)
+...
T Consensus 277 s~~~ 280 (549)
T 3nlc_A 277 ARDT 280 (549)
T ss_dssp CHHH
T ss_pred hhhH
Confidence 9744
No 43
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.72 E-value=9e-05 Score=67.30 Aligned_cols=68 Identities=15% Similarity=0.268 Sum_probs=60.4
Q ss_pred eeecHHHHHHHHHHHHHHC-CcEEEcCceeEEEEEeCCeE--EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 39 GIVDSHSLMLSLVGEAENH-GTTFSNNTSVIGGHLEGNCM--NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 39 g~vdp~~l~~~l~~~a~~~-Gv~~~~~~~V~~i~~~~~~~--~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
..++...+...|.+.+++. |++++++++|+++..+++++ .|++.+|. +++||.||.|.|.++
T Consensus 102 ~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~---------------~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 102 ILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGR---------------VLRPRVVVGADGIAS 166 (399)
T ss_dssp EECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSC---------------EEEEEEEEECCCTTC
T ss_pred ccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCC---------------EEECCEEEECCCCCh
Confidence 4688999999999999988 99999999999999888888 89888872 799999999999999
Q ss_pred hHHHHHh
Q 023079 116 PALAKRF 122 (287)
Q Consensus 116 ~~l~~~~ 122 (287)
. +.+.+
T Consensus 167 ~-vr~~l 172 (399)
T 2x3n_A 167 Y-VRRRL 172 (399)
T ss_dssp H-HHHHT
T ss_pred H-HHHHh
Confidence 8 66666
No 44
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.71 E-value=0.00013 Score=58.56 Aligned_cols=64 Identities=16% Similarity=0.129 Sum_probs=55.7
Q ss_pred ecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHH
Q 023079 41 VDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAK 120 (287)
Q Consensus 41 vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~ 120 (287)
+.+..+...+.+.+++.|++++.+ +|++++.+++.+.|++++| +++||.||+|+|.++ .+.+
T Consensus 53 ~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g----------------~i~ad~vI~A~G~~~-~~~~ 114 (180)
T 2ywl_A 53 PSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG----------------VEKAERLLLCTHKDP-TLPS 114 (180)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC----------------EEEEEEEEECCTTCC-HHHH
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC----------------EEEECEEEECCCCCC-Cccc
Confidence 567888999999999999999999 9999998777788988877 799999999999997 4556
Q ss_pred Hh
Q 023079 121 RF 122 (287)
Q Consensus 121 ~~ 122 (287)
.+
T Consensus 115 ~~ 116 (180)
T 2ywl_A 115 LL 116 (180)
T ss_dssp HH
T ss_pred cC
Confidence 66
No 45
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.58 E-value=4.9e-05 Score=70.34 Aligned_cols=67 Identities=18% Similarity=0.093 Sum_probs=56.1
Q ss_pred EEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEE-EEecCCcccccCCCCCCCCCceeEecCEEEEcC
Q 023079 33 LLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMN-VYISESKNLRNWDGVSPLQPELTLIPKLVVNSA 111 (287)
Q Consensus 33 l~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~-V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aa 111 (287)
++.|.+| ...++.+|++.++++|++|+++++|++|..+++++. |++ +|. +++||+||+|+
T Consensus 226 ~~~p~gG---~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~-~g~---------------~~~ad~VV~a~ 286 (433)
T 1d5t_A 226 YLYPLYG---LGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-EGE---------------VARCKQLICDP 286 (433)
T ss_dssp EEEETTC---TTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEE-TTE---------------EEECSEEEECG
T ss_pred EEEeCcC---HHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEE-CCe---------------EEECCEEEECC
Confidence 6667777 468999999999999999999999999998888776 554 452 79999999999
Q ss_pred CCCchHH
Q 023079 112 GLSAPAL 118 (287)
Q Consensus 112 G~~s~~l 118 (287)
|+|...+
T Consensus 287 ~~~~~~~ 293 (433)
T 1d5t_A 287 SYVPDRV 293 (433)
T ss_dssp GGCGGGE
T ss_pred CCCcccc
Confidence 9997643
No 46
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.57 E-value=7.4e-05 Score=69.47 Aligned_cols=67 Identities=16% Similarity=0.110 Sum_probs=55.3
Q ss_pred EEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEe--CCeE-EEEecCCcccccCCCCCCCCCceeEecCEEEE
Q 023079 33 LLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLE--GNCM-NVYISESKNLRNWDGVSPLQPELTLIPKLVVN 109 (287)
Q Consensus 33 l~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~--~~~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~ 109 (287)
...|.+|. ..++.+|++.++++|++|+++++|++|..+ ++++ .|++. |. +++||+||+
T Consensus 234 ~~~p~gG~---~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~-g~---------------~~~ad~VV~ 294 (453)
T 2bcg_G 234 YLYPMYGL---GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTK-LG---------------TFKAPLVIA 294 (453)
T ss_dssp EEEETTCT---THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEET-TE---------------EEECSCEEE
T ss_pred eEeeCCCH---HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEEC-Ce---------------EEECCEEEE
Confidence 43566663 589999999999999999999999999988 7775 57774 41 799999999
Q ss_pred cCCCCchHH
Q 023079 110 SAGLSAPAL 118 (287)
Q Consensus 110 aaG~~s~~l 118 (287)
|+|+|+..+
T Consensus 295 a~~~~~~~l 303 (453)
T 2bcg_G 295 DPTYFPEKC 303 (453)
T ss_dssp CGGGCGGGE
T ss_pred CCCccchhh
Confidence 999997754
No 47
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.52 E-value=0.00022 Score=69.49 Aligned_cols=95 Identities=7% Similarity=0.020 Sum_probs=67.2
Q ss_pred CCCeeeeeCHHHHHhhCCCcccceeEEcCCcee---ecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeE-EEEe--
Q 023079 8 GVHGLRMLEGFEAMKMEPELQCVKALLSPASGI---VDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCM-NVYI-- 81 (287)
Q Consensus 8 g~~~~~~L~~~ei~~~~P~l~~~~al~~p~~g~---vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~-~V~t-- 81 (287)
|.+ +++|+++++.++++ ....+|...+.... ..+..++.+|.+.+.++|++|+++++|+++..+++++ .|.+
T Consensus 121 g~~-~~~l~~~e~~~~~~-~~~~gg~~~~R~~~~~d~tG~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~ 198 (660)
T 2bs2_A 121 AQK-TTITEEDFRHGLIH-SRDFGGTKKWRTCYTADATGHTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRD 198 (660)
T ss_dssp SCC-CEEEECGGGTTSBC-CBCCTTCSSCCEECSTTCHHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEE
T ss_pred ccc-cccccchhhhhhhc-cccccccccceeEeeCCCCHHHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEE
Confidence 444 67888888877653 23334444343222 2367899999999999999999999999998776654 3433
Q ss_pred -cCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 82 -SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 82 -~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
.+| +...++|+.||+|+|.|+..
T Consensus 199 ~~~G-------------~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 199 LVTG-------------DIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp TTTC-------------CEEEEECSEEEECCCCCGGG
T ss_pred CCCC-------------cEEEEEcCEEEEccCcchhh
Confidence 445 13459999999999999853
No 48
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.52 E-value=0.0002 Score=68.51 Aligned_cols=72 Identities=15% Similarity=0.142 Sum_probs=57.8
Q ss_pred EEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeC-CeE-EEEec--CCcccccCCCCCCCCCceeEecCEEE
Q 023079 33 LLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEG-NCM-NVYIS--ESKNLRNWDGVSPLQPELTLIPKLVV 108 (287)
Q Consensus 33 l~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~-~~~-~V~t~--~g~~~~~~~~~~~~~~~~~i~a~~VV 108 (287)
.+.|.++.+++..++..|.+.+++.|++|+++++|+++..++ +++ .|++. +|. ..+|+||.||
T Consensus 239 ~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~-------------~~~i~A~~VV 305 (566)
T 1qo8_A 239 THRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTG-------------YYMIGAKSVV 305 (566)
T ss_dssp EEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTE-------------EEEEEEEEEE
T ss_pred eeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCc-------------EEEEEcCEEE
Confidence 455666778899999999999999999999999999998877 654 24443 551 2469999999
Q ss_pred EcCCCCchH
Q 023079 109 NSAGLSAPA 117 (287)
Q Consensus 109 ~aaG~~s~~ 117 (287)
+|+|.|+..
T Consensus 306 lAtGg~s~~ 314 (566)
T 1qo8_A 306 LATGGYGMN 314 (566)
T ss_dssp ECCCCCTTC
T ss_pred EecCCcccC
Confidence 999999863
No 49
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.48 E-value=0.00033 Score=67.04 Aligned_cols=71 Identities=14% Similarity=0.077 Sum_probs=56.6
Q ss_pred EEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeC-CeE-EEEec--CCcccccCCCCCCCCCceeEecCEEE
Q 023079 33 LLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEG-NCM-NVYIS--ESKNLRNWDGVSPLQPELTLIPKLVV 108 (287)
Q Consensus 33 l~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~-~~~-~V~t~--~g~~~~~~~~~~~~~~~~~i~a~~VV 108 (287)
.+.+.+|...+..++..|.+.+++.|++|+++++|+++..++ +++ .|++. +|. ..+|+||.||
T Consensus 244 ~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~-------------~~~i~a~~VV 310 (571)
T 1y0p_A 244 AHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKG-------------YYWVKADAVI 310 (571)
T ss_dssp EEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTE-------------EEEEECSEEE
T ss_pred eEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCc-------------EEEEECCeEE
Confidence 455666667889999999999999999999999999998876 554 24433 451 3469999999
Q ss_pred EcCCCCch
Q 023079 109 NSAGLSAP 116 (287)
Q Consensus 109 ~aaG~~s~ 116 (287)
+|+|.|+.
T Consensus 311 lAtGg~~~ 318 (571)
T 1y0p_A 311 LATGGFAK 318 (571)
T ss_dssp ECCCCCTT
T ss_pred EeCCCccc
Confidence 99999985
No 50
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.46 E-value=9e-05 Score=68.85 Aligned_cols=66 Identities=20% Similarity=0.187 Sum_probs=54.6
Q ss_pred eEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCe-EEEEecCCcccccCCCCCCCCCceeEecCEEEEc
Q 023079 32 ALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNC-MNVYISESKNLRNWDGVSPLQPELTLIPKLVVNS 110 (287)
Q Consensus 32 al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~-~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~a 110 (287)
+++.+.+| ...++.+|++.+.++|++|+++++|++|..++++ |.|++.++ +++||+||+|
T Consensus 225 ~~~~~~gG---~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~~~----------------~~~ad~vv~a 285 (477)
T 3nks_A 225 SQWSLRGG---LEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDS----------------SLEADHVISA 285 (477)
T ss_dssp SEEEETTC---TTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECSSC----------------EEEESEEEEC
T ss_pred cEEEECCC---HHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEECCe----------------EEEcCEEEEC
Confidence 34555555 3578999999999999999999999999987766 88988655 7999999999
Q ss_pred CCCCch
Q 023079 111 AGLSAP 116 (287)
Q Consensus 111 aG~~s~ 116 (287)
++++..
T Consensus 286 ~p~~~~ 291 (477)
T 3nks_A 286 IPASVL 291 (477)
T ss_dssp SCHHHH
T ss_pred CCHHHH
Confidence 998754
No 51
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.44 E-value=0.0003 Score=62.18 Aligned_cols=62 Identities=11% Similarity=0.055 Sum_probs=54.2
Q ss_pred eecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEE-EEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 40 IVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMN-VYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~-V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
+.....+...+.+.+++.|++++++++|+++..+++.|. |+++++ ++++|+||+|+|.++..
T Consensus 72 ~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g----------------~~~~d~vV~AtG~~~~~ 134 (357)
T 4a9w_A 72 YPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR----------------QWLARAVISATGTWGEA 134 (357)
T ss_dssp SCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC----------------EEEEEEEEECCCSGGGB
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC----------------EEEeCEEEECCCCCCCC
Confidence 344577888888888999999999999999999988999 999888 89999999999998754
No 52
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.43 E-value=0.00017 Score=67.57 Aligned_cols=65 Identities=15% Similarity=0.179 Sum_probs=54.1
Q ss_pred eEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEE-eCCe-EEEEecCCcccccCCCCCCCCCceeEecCEEEE
Q 023079 32 ALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHL-EGNC-MNVYISESKNLRNWDGVSPLQPELTLIPKLVVN 109 (287)
Q Consensus 32 al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~-~~~~-~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~ 109 (287)
.+..|..|. ..++++|.+.++++|++|+.+++|++|.. ++++ +.|++.+|. +++||+||+
T Consensus 247 ~~~yp~gG~---~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~---------------~i~Ad~VI~ 308 (475)
T 3p1w_A 247 PFIYPLYGL---GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGE---------------IAYCDKVIC 308 (475)
T ss_dssp SEEEETTCT---THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSC---------------EEEEEEEEE
T ss_pred ceEEECCCH---HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCc---------------EEECCEEEE
Confidence 456677874 68999999999999999999999999998 6555 469998872 799999999
Q ss_pred cCCCC
Q 023079 110 SAGLS 114 (287)
Q Consensus 110 aaG~~ 114 (287)
|++.+
T Consensus 309 a~~~~ 313 (475)
T 3p1w_A 309 DPSYV 313 (475)
T ss_dssp CGGGC
T ss_pred CCCcc
Confidence 99988
No 53
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.40 E-value=0.00039 Score=62.04 Aligned_cols=61 Identities=11% Similarity=0.017 Sum_probs=52.7
Q ss_pred eecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 40 IVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
.+++..+...+.+.+++.|++++.+++|+++..+++.|.|++.++ ++++|+||+|+|.++.
T Consensus 84 ~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g----------------~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 84 HISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE----------------TYHADYIFVATGDYNF 144 (369)
T ss_dssp SCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC----------------CEEEEEEEECCCSTTS
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC----------------EEEeCEEEECCCCCCc
Confidence 456677888888888889999999999999998877899998877 7999999999999863
No 54
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.39 E-value=0.00059 Score=64.33 Aligned_cols=71 Identities=18% Similarity=0.229 Sum_probs=56.8
Q ss_pred ceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeE---EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 38 SGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCM---NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 38 ~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~---~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
...++...+...|.+.+++.|++++++++|+++..+++++ .+.+.+|. +.+++||.||.|+|.+
T Consensus 105 ~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~-------------~~~i~ad~VI~AdG~~ 171 (512)
T 3e1t_A 105 AYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGV-------------ELMAHARFIVDASGNR 171 (512)
T ss_dssp EEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSC-------------EEEEEEEEEEECCCTT
T ss_pred eeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCC-------------EEEEEcCEEEECCCcc
Confidence 4468999999999999999999999999999999988764 34444551 2479999999999999
Q ss_pred chHHHHHh
Q 023079 115 APALAKRF 122 (287)
Q Consensus 115 s~~l~~~~ 122 (287)
+.- .+.+
T Consensus 172 S~v-r~~l 178 (512)
T 3e1t_A 172 TRV-SQAV 178 (512)
T ss_dssp CSS-GGGT
T ss_pred hHH-HHHc
Confidence 853 3444
No 55
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.32 E-value=0.00069 Score=64.85 Aligned_cols=70 Identities=20% Similarity=0.145 Sum_probs=54.0
Q ss_pred EcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeC-CeE-EEEec--CCcccccCCCCCCCCCceeEecCEEEE
Q 023079 34 LSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEG-NCM-NVYIS--ESKNLRNWDGVSPLQPELTLIPKLVVN 109 (287)
Q Consensus 34 ~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~-~~~-~V~t~--~g~~~~~~~~~~~~~~~~~i~a~~VV~ 109 (287)
+.+.++...+..++..|.+.+++.|++++++++|+++..++ +++ .|+.. +|. ..+|+||.||+
T Consensus 245 ~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~-------------~~~i~A~~VVl 311 (572)
T 1d4d_A 245 HRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTG-------------YYVIKADAVVI 311 (572)
T ss_dssp EESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTE-------------EEEEECSEEEE
T ss_pred EecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCc-------------EEEEEcCEEEE
Confidence 34555556788999999999999999999999999998766 543 34443 451 24699999999
Q ss_pred cCCCCch
Q 023079 110 SAGLSAP 116 (287)
Q Consensus 110 aaG~~s~ 116 (287)
|+|.++.
T Consensus 312 AtGg~~~ 318 (572)
T 1d4d_A 312 AAGGFAK 318 (572)
T ss_dssp CCCCCTT
T ss_pred eCCCCcc
Confidence 9999985
No 56
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.30 E-value=0.00079 Score=56.60 Aligned_cols=61 Identities=20% Similarity=0.030 Sum_probs=50.8
Q ss_pred cHHHHHHHHHHHHHHC-CcEEEcCceeEEEEEeCCeE-EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHH
Q 023079 42 DSHSLMLSLVGEAENH-GTTFSNNTSVIGGHLEGNCM-NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPAL 118 (287)
Q Consensus 42 dp~~l~~~l~~~a~~~-Gv~~~~~~~V~~i~~~~~~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l 118 (287)
++..+...|.+.+++. |++++ +++|+++..+++++ .|++.+|. +++||.||+|+|.|+...
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~---------------~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGP---------------PARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSC---------------CEECSEEEECCTTCSSCE
T ss_pred CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCC---------------EEECCEEEECCCCChhhc
Confidence 6678888888889887 99998 47999998887775 58888772 799999999999987654
No 57
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.21 E-value=0.00047 Score=64.99 Aligned_cols=64 Identities=20% Similarity=0.120 Sum_probs=49.7
Q ss_pred ecHH-HHHHHHHHHHHHCCcEEEcCceeEEEEEe-CCeE-EEEecCCcccccCCCCCCCCCceeEecC-EEEEcCCCCch
Q 023079 41 VDSH-SLMLSLVGEAENHGTTFSNNTSVIGGHLE-GNCM-NVYISESKNLRNWDGVSPLQPELTLIPK-LVVNSAGLSAP 116 (287)
Q Consensus 41 vdp~-~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~-~~~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~-~VV~aaG~~s~ 116 (287)
.... .++..|.+.++++|++|+++++|+++..+ ++++ .|.+.++. ++.+|+|+ .||+|+|.|+.
T Consensus 198 ~~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g------------~~~~i~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 198 KGGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYG------------KEVAVRARRGVVLATGSFAY 265 (510)
T ss_dssp BCTTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETT------------EEEEEEEEEEEEECCCCCTT
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECC------------cEEEEEeCCeEEEeCCChhh
Confidence 3444 89999999999999999999999999987 4554 35544331 13479995 99999999984
No 58
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.19 E-value=0.001 Score=62.88 Aligned_cols=70 Identities=10% Similarity=0.092 Sum_probs=57.3
Q ss_pred CceeecHHHHHHHHHHHHHH-CCcEEEcCceeEEEEEeCCe--EEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 37 ASGIVDSHSLMLSLVGEAEN-HGTTFSNNTSVIGGHLEGNC--MNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 37 ~~g~vdp~~l~~~l~~~a~~-~Gv~~~~~~~V~~i~~~~~~--~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
....++...+...|.+.|++ .|++++++ +|+++..++++ +.|++.+|. +++||.||.|+|.
T Consensus 168 ~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~---------------~i~ad~vV~AdG~ 231 (526)
T 2pyx_A 168 YGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNG---------------EISGQLFIDCTGA 231 (526)
T ss_dssp CEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSC---------------EEECSEEEECSGG
T ss_pred eeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCC---------------EEEcCEEEECCCc
Confidence 45679999999999999998 89999999 69999876543 367887762 6999999999999
Q ss_pred CchHHHHHh
Q 023079 114 SAPALAKRF 122 (287)
Q Consensus 114 ~s~~l~~~~ 122 (287)
+|.-+.+.+
T Consensus 232 ~S~~~~~~l 240 (526)
T 2pyx_A 232 KSLLLGEHL 240 (526)
T ss_dssp GCCCCCCCT
T ss_pred chHHHHHHh
Confidence 987545544
No 59
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.18 E-value=0.00072 Score=63.13 Aligned_cols=59 Identities=17% Similarity=0.158 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHCC-cEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 43 SHSLMLSLVGEAENHG-TTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 43 p~~l~~~l~~~a~~~G-v~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
...++.+|++.+.+.| ++|+++++|++|..+++++.|++.+|. +++||+||+|+|++..
T Consensus 254 ~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~---------------~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 254 QSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGR---------------EFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCC---------------EEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCC---------------EEEcCEEEECCCHHHH
Confidence 3578899999999888 999999999999988888999998872 7999999999998654
No 60
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.14 E-value=0.0014 Score=58.90 Aligned_cols=66 Identities=18% Similarity=0.253 Sum_probs=56.1
Q ss_pred ceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 38 SGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 38 ~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
...++...+...|.+.+.+.|++++++++|++++. + + .|++.+|. +++||.||.|+|.++.
T Consensus 101 ~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-~-~v~~~~g~---------------~~~ad~vV~AdG~~s~- 161 (379)
T 3alj_A 101 WRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V-G-RLTLQTGE---------------VLEADLIVGADGVGSK- 161 (379)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T-T-EEEETTSC---------------EEECSEEEECCCTTCH-
T ss_pred eEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-C-EEEECCCC---------------EEEcCEEEECCCccHH-
Confidence 45778899999999999999999999999999987 3 3 78887772 7999999999999985
Q ss_pred HHHHh
Q 023079 118 LAKRF 122 (287)
Q Consensus 118 l~~~~ 122 (287)
+.+.+
T Consensus 162 vr~~l 166 (379)
T 3alj_A 162 VRDSI 166 (379)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55555
No 61
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.07 E-value=0.0024 Score=55.37 Aligned_cols=83 Identities=13% Similarity=0.122 Sum_probs=56.1
Q ss_pred cHHHHHHHHHHHHHH-CCcEEEcCceeEEEEEeCCeE-EEEec---------CCcccccCCCCCCCCCceeEecCEEEEc
Q 023079 42 DSHSLMLSLVGEAEN-HGTTFSNNTSVIGGHLEGNCM-NVYIS---------ESKNLRNWDGVSPLQPELTLIPKLVVNS 110 (287)
Q Consensus 42 dp~~l~~~l~~~a~~-~Gv~~~~~~~V~~i~~~~~~~-~V~t~---------~g~~~~~~~~~~~~~~~~~i~a~~VV~a 110 (287)
+...++..|.+.+.+ .|++++++++|+++..+++++ .|.+. ++. .+++.+++||.||+|
T Consensus 117 ~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~----------~g~~~~i~ad~VV~A 186 (284)
T 1rp0_A 117 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQS----------CMDPNVMEAKIVVSS 186 (284)
T ss_dssp CHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSS----------CCCCEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccc----------cCceEEEECCEEEEC
Confidence 667888888888876 699999999999999887765 35442 210 012347999999999
Q ss_pred CC------CCchHHHHHhCCCCCcccCCccccceE
Q 023079 111 AG------LSAPALAKRFIGLDNVFIPPAYYARGC 139 (287)
Q Consensus 111 aG------~~s~~l~~~~~~~~~~~~p~~~~~~g~ 139 (287)
+| .|+..++..+ +..+++.| .+|.
T Consensus 187 tG~~s~~~~~~~~~~~~~-g~~~~v~~----~~g~ 216 (284)
T 1rp0_A 187 CGHDGPFGATGVKRLKSI-GMIDHVPG----MKAL 216 (284)
T ss_dssp CCSSSTTTTHHHHHHHHT-TSSSCCCC----CEEE
T ss_pred CCCchHHHHHHHHHhhhc-cCCCCcCC----cCCc
Confidence 99 4545555443 33333334 6653
No 62
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.00 E-value=0.0016 Score=58.91 Aligned_cols=65 Identities=18% Similarity=0.210 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH-HHHH
Q 023079 43 SHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA-LAKR 121 (287)
Q Consensus 43 p~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~-l~~~ 121 (287)
+..+...+.+.+++.|++|+++++|++++.+++.+.|++.+|. +++||.||+|+|.+... +++.
T Consensus 186 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~---------------~i~~d~vv~a~G~~p~~~l~~~ 250 (384)
T 2v3a_A 186 HPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGE---------------VIPCDLVVSAVGLRPRTELAFA 250 (384)
T ss_dssp CHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSC---------------EEEESEEEECSCEEECCHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCC---------------EEECCEEEECcCCCcCHHHHHH
Confidence 5677788888889999999999999999887778888888772 79999999999998764 6666
Q ss_pred h
Q 023079 122 F 122 (287)
Q Consensus 122 ~ 122 (287)
+
T Consensus 251 ~ 251 (384)
T 2v3a_A 251 A 251 (384)
T ss_dssp T
T ss_pred C
Confidence 6
No 63
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.99 E-value=0.0023 Score=57.70 Aligned_cols=68 Identities=13% Similarity=0.095 Sum_probs=53.8
Q ss_pred ecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeC-CeEEEEe-cCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHH
Q 023079 41 VDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEG-NCMNVYI-SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPAL 118 (287)
Q Consensus 41 vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~-~~~~V~t-~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l 118 (287)
++...+...|.+.+.+.|++++.+++|+++..++ +.+.|++ .+|. +.+++||.||.|.|.+|. +
T Consensus 100 ~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~-------------~~~~~a~~vV~AdG~~S~-v 165 (394)
T 1k0i_A 100 YGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGE-------------RLRLDCDYIAGCDGFHGI-S 165 (394)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTE-------------EEEEECSEEEECCCTTCS-T
T ss_pred echHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCc-------------EEEEEeCEEEECCCCCcH-H
Confidence 4567788889998988899999999999998763 5677776 6661 225999999999999987 4
Q ss_pred HHHh
Q 023079 119 AKRF 122 (287)
Q Consensus 119 ~~~~ 122 (287)
.+.+
T Consensus 166 r~~l 169 (394)
T 1k0i_A 166 RQSI 169 (394)
T ss_dssp GGGS
T ss_pred HHhc
Confidence 4444
No 64
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.96 E-value=0.0023 Score=56.25 Aligned_cols=61 Identities=23% Similarity=0.259 Sum_probs=52.9
Q ss_pred eecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 40 IVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
.+++..+...+.+.+++.|++++.+++|+++..+++.|.|++.+|. ++++|+||+|+|..+
T Consensus 61 ~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~---------------~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 61 KVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGN---------------AYTAKAVIIAAGVGA 121 (335)
T ss_dssp SEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSC---------------EEEEEEEEECCTTSE
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCC---------------EEEeCEEEECCCCCC
Confidence 4677888888888888889999999999999988778889988772 799999999999864
No 65
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.81 E-value=0.0031 Score=54.75 Aligned_cols=61 Identities=18% Similarity=0.167 Sum_probs=52.2
Q ss_pred eecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 40 IVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
.+++..+...+.+.+++.|++++. ++|+++..+++.|.|++.+|. ++++|+||+|+|.+..
T Consensus 55 ~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~---------------~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 55 VVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGK---------------TFEAKSVIIATGGSPK 115 (311)
T ss_dssp CBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSC---------------EEEEEEEEECCCEEEC
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCC---------------EEECCEEEECCCCCCC
Confidence 468888999888888899999998 799999988888888887772 7999999999997653
No 66
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.80 E-value=0.0027 Score=55.44 Aligned_cols=90 Identities=14% Similarity=0.155 Sum_probs=66.6
Q ss_pred hhcCCCeeeeeCHHH-----HHhhCCCcccceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCC-eEE
Q 023079 5 TANGVHGLRMLEGFE-----AMKMEPELQCVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGN-CMN 78 (287)
Q Consensus 5 ~~~g~~~~~~L~~~e-----i~~~~P~l~~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~-~~~ 78 (287)
++.|.. +.++++.. ....+|..... ..+.-..+.+..+...+.+.+++.|++++.+++|+++..+++ .|.
T Consensus 27 ~~~g~~-v~lie~~~~~gG~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~ 102 (332)
T 3lzw_A 27 GMRQAS-VKIIESLPQLGGQLSALYPEKYIY---DVAGFPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFK 102 (332)
T ss_dssp HHTTCC-EEEECSSSSSCHHHHHHCTTSEEC---CSTTCSSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEE
T ss_pred HHCCCC-EEEEEcCCCCCceehhcCCCceEe---ccCCCCCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEE
Confidence 445775 78887653 33344443210 012222356888999999889889999999999999998866 789
Q ss_pred EEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 79 VYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 79 V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
|++.+| ++.+|+||+|+|.+
T Consensus 103 v~~~~g----------------~~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 103 LVTNEE----------------THYSKTVIITAGNG 122 (332)
T ss_dssp EEESSE----------------EEEEEEEEECCTTS
T ss_pred EEECCC----------------EEEeCEEEECCCCC
Confidence 999888 79999999999994
No 67
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.75 E-value=0.0043 Score=57.64 Aligned_cols=64 Identities=25% Similarity=0.261 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch-HHHHHh
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP-ALAKRF 122 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~-~l~~~~ 122 (287)
..+...+.+.+++.|++|+.+++|++++.+++++.|++.+|. ++.||.||+|+|.+.+ .+++.+
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~---------------~i~aD~Vv~a~G~~p~~~l~~~~ 266 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKR---------------TLDADLVILAAGVSPNTQLARDA 266 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSC---------------EEECSEEEECSCEEECCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCC---------------EEEcCEEEECCCCCcCHHHHHhC
Confidence 567777888889999999999999999887777878887772 7999999999999865 566666
No 68
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.75 E-value=0.0045 Score=55.05 Aligned_cols=61 Identities=21% Similarity=0.161 Sum_probs=52.7
Q ss_pred eecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCC-eEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 40 IVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGN-CMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~-~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
.+++..+...+.+.+++.|++++.+++|+++..+++ .|.|++.+|. ++++|+||+|+|..+
T Consensus 70 ~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~---------------~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 70 EVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGN---------------VYRSRAVLIAAGLGA 131 (360)
T ss_dssp SEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSC---------------EEEEEEEEECCTTCS
T ss_pred CCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCc---------------EEEeeEEEEccCCCc
Confidence 367888999999999989999999999999988765 7889988773 799999999999854
No 69
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.72 E-value=0.0033 Score=60.87 Aligned_cols=60 Identities=15% Similarity=0.026 Sum_probs=51.0
Q ss_pred eecHHHHHHHHHHHHHH-CCcEEEcCceeEEEEEeCCeE-EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 40 IVDSHSLMLSLVGEAEN-HGTTFSNNTSVIGGHLEGNCM-NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~-~Gv~~~~~~~V~~i~~~~~~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
++|...+...|.+.+++ .|++++ +++|+++..+++.+ .|.+.+|. +++|+.||+|+|.|+
T Consensus 120 ~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~---------------~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 120 QADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGL---------------KFRAKAVVLTVGTFL 181 (651)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSE---------------EEEEEEEEECCSTTT
T ss_pred hCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCC---------------EEECCEEEEcCCCCc
Confidence 68888999999999988 699995 57999998877765 68888772 799999999999984
No 70
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.72 E-value=0.004 Score=53.39 Aligned_cols=91 Identities=7% Similarity=-0.071 Sum_probs=66.0
Q ss_pred chhcCCCeeeeeCHHHHHhhCCCcccceeEEcCCceeecHHHHHHHHHHHHHHC-CcEEEcCceeEEEEEeCCeEEEEec
Q 023079 4 GTANGVHGLRMLEGFEAMKMEPELQCVKALLSPASGIVDSHSLMLSLVGEAENH-GTTFSNNTSVIGGHLEGNCMNVYIS 82 (287)
Q Consensus 4 ~~~~g~~~~~~L~~~ei~~~~P~l~~~~al~~p~~g~vdp~~l~~~l~~~a~~~-Gv~~~~~~~V~~i~~~~~~~~V~t~ 82 (287)
+++.|.+ +.++++......+|.... -.+.....++..+...+.+.+++. +++++. ++|+++..+++.|.|++.
T Consensus 21 l~~~g~~-v~lie~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~ 94 (297)
T 3fbs_A 21 LGRARKN-ILLVDAGERRNRFASHSH----GFLGQDGKAPGEIIAEARRQIERYPTIHWVE-GRVTDAKGSFGEFIVEID 94 (297)
T ss_dssp HHHTTCC-EEEEECCCCGGGGCSCCC----SSTTCTTCCHHHHHHHHHHHHTTCTTEEEEE-SCEEEEEEETTEEEEEET
T ss_pred HHhCCCC-EEEEeCCCcccccchhhc----CCcCCCCCCHHHHHHHHHHHHHhcCCeEEEE-eEEEEEEEcCCeEEEEEC
Confidence 3456775 888876554443332210 012233578889999998888887 788875 599999998888999998
Q ss_pred CCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 83 ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 83 ~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
++. ++++|+||+|+|...
T Consensus 95 ~g~---------------~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 95 GGR---------------RETAGRLILAMGVTD 112 (297)
T ss_dssp TSC---------------EEEEEEEEECCCCEE
T ss_pred CCC---------------EEEcCEEEECCCCCC
Confidence 882 799999999999864
No 71
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.72 E-value=0.0041 Score=56.56 Aligned_cols=65 Identities=18% Similarity=0.194 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeE-EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH-HHH
Q 023079 43 SHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCM-NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA-LAK 120 (287)
Q Consensus 43 p~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~-l~~ 120 (287)
+..+...+.+.++++|++|+++++|+++..+++++ .|++.+|. ++.||.||+|+|...+. +++
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~---------------~i~aD~Vv~a~G~~p~~~l~~ 247 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGN---------------TLPCDLVVVGVGVIPNVEIAA 247 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSC---------------EEECSEEEECCCEEECCHHHH
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCC---------------EEEcCEEEECcCCccCHHHHH
Confidence 45677888888899999999999999998877666 48888883 79999999999998764 666
Q ss_pred Hh
Q 023079 121 RF 122 (287)
Q Consensus 121 ~~ 122 (287)
.+
T Consensus 248 ~~ 249 (404)
T 3fg2_P 248 AA 249 (404)
T ss_dssp HT
T ss_pred hC
Confidence 66
No 72
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=96.69 E-value=0.0053 Score=59.34 Aligned_cols=61 Identities=15% Similarity=0.178 Sum_probs=51.9
Q ss_pred eecHHHHHHHHHHHHHHC-CcEEEcCceeEEEEEeCCeEE-EEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 40 IVDSHSLMLSLVGEAENH-GTTFSNNTSVIGGHLEGNCMN-VYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~-Gv~~~~~~~V~~i~~~~~~~~-V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
++|...+...|.+.+++. |++++. .+|+++..+++.+. |.+.+|. +++|+.||+|+|.|+.
T Consensus 113 ~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~---------------~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 113 QADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGR---------------AIQAKAAILACGTFLN 175 (641)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSC---------------EEEEEEEEECCTTCBT
T ss_pred hcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCc---------------EEEeCEEEECcCCCCC
Confidence 688899999999888885 999975 58999988877775 8888773 7999999999999855
No 73
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.69 E-value=0.005 Score=59.43 Aligned_cols=60 Identities=17% Similarity=0.085 Sum_probs=51.0
Q ss_pred eecHHHHHHHHHHHHHH-CCcEEEcCceeEEEEEeCCeE-EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 40 IVDSHSLMLSLVGEAEN-HGTTFSNNTSVIGGHLEGNCM-NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~-~Gv~~~~~~~V~~i~~~~~~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
++|...+...|.+.+++ .|++++ +++|+++..+++++ .|.+.+|. +++|+.||+|+|.|+
T Consensus 119 ~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~---------------~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 119 QADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGV---------------EYKTKAVVVTTGTFL 180 (637)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSC---------------EEECSEEEECCTTCB
T ss_pred hCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCc---------------EEEeCEEEEccCCCc
Confidence 67889999999999988 599996 57999998877766 58888873 799999999999874
No 74
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.69 E-value=0.0039 Score=58.89 Aligned_cols=66 Identities=12% Similarity=0.161 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCe----EEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH-
Q 023079 43 SHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNC----MNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA- 117 (287)
Q Consensus 43 p~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~----~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~- 117 (287)
+..+...+.+.++++|++|+++++|+++..++++ +.|++++|. .++.||.||+|+|.+.+.
T Consensus 254 ~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~--------------~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGE--------------MRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEE--------------EEEECSCEEECCCCEECCH
T ss_pred cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCc--------------EEEEcCEEEECcCCccCCc
Confidence 4567788888899999999999999999876554 678887771 269999999999999876
Q ss_pred -HHHHh
Q 023079 118 -LAKRF 122 (287)
Q Consensus 118 -l~~~~ 122 (287)
+++.+
T Consensus 320 ~~l~~~ 325 (523)
T 1mo9_A 320 ELAKIL 325 (523)
T ss_dssp HHHHHH
T ss_pred cCHHHc
Confidence 56666
No 75
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.66 E-value=0.0054 Score=58.89 Aligned_cols=63 Identities=11% Similarity=0.077 Sum_probs=50.1
Q ss_pred cHHHHHHHHHHHHHHCCcEEEcCceeEEEEEe-CCeE-EEEe---cCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 42 DSHSLMLSLVGEAENHGTTFSNNTSVIGGHLE-GNCM-NVYI---SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 42 dp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~-~~~~-~V~t---~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
.+..++.+|.+.+++.|++|+++++|+++..+ ++++ .|.. .+| +...+.|+.||+|+|.|+.
T Consensus 141 ~g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g-------------~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 141 TGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETG-------------EVVYFKARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTC-------------CEEEEEEEEEEECCCCCGG
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCC-------------eEEEEEcCEEEECCCCCcc
Confidence 36789999999999999999999999999885 5544 3443 344 2346999999999999986
Q ss_pred H
Q 023079 117 A 117 (287)
Q Consensus 117 ~ 117 (287)
.
T Consensus 208 ~ 208 (588)
T 2wdq_A 208 I 208 (588)
T ss_dssp G
T ss_pred c
Confidence 4
No 76
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.66 E-value=0.0035 Score=54.39 Aligned_cols=60 Identities=10% Similarity=0.034 Sum_probs=51.4
Q ss_pred eecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 40 IVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
.+.+..+...+.+.+++.|++++. ++|+++..+++.+.|++.++. ++++|+||+|+|.+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~---------------~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 66 EIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDEFVVKTKRKG---------------EFKADSVILGIGVKR 125 (323)
T ss_dssp TEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--CEEEEESSSC---------------EEEEEEEEECCCCEE
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCEEEEEECCCC---------------EEEcCEEEECcCCCC
Confidence 367889999999999999999998 899999988888999998862 799999999999873
No 77
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.66 E-value=0.0048 Score=56.28 Aligned_cols=65 Identities=12% Similarity=0.146 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeE-EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH-HHH
Q 023079 43 SHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCM-NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA-LAK 120 (287)
Q Consensus 43 p~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~-l~~ 120 (287)
+..+...+.+.++++|++|+++++|+++..+++++ .|++.+|. ++.||.||+|+|...+. +++
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~---------------~i~aD~Vv~a~G~~p~~~l~~ 257 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGS---------------VIPADIVIVGIGIVPCVGALI 257 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSC---------------EEECSEEEECSCCEESCHHHH
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCC---------------EEEcCEEEECCCCccChHHHH
Confidence 46777888888899999999999999998876666 58888883 79999999999998764 666
Q ss_pred Hh
Q 023079 121 RF 122 (287)
Q Consensus 121 ~~ 122 (287)
.+
T Consensus 258 ~~ 259 (415)
T 3lxd_A 258 SA 259 (415)
T ss_dssp HT
T ss_pred hC
Confidence 65
No 78
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.65 E-value=0.005 Score=58.47 Aligned_cols=64 Identities=17% Similarity=0.187 Sum_probs=53.5
Q ss_pred eeecHHHHHHHHHHHHHHCCc--EEEcCceeEEEEEeCC--eEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 39 GIVDSHSLMLSLVGEAENHGT--TFSNNTSVIGGHLEGN--CMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 39 g~vdp~~l~~~l~~~a~~~Gv--~~~~~~~V~~i~~~~~--~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
...+...+...+.+.+++.|+ .++++++|+++..+++ .|.|++++|. +++||+||+|+|.+
T Consensus 82 ~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~---------------~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 82 TYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGE---------------VYRAKYVVNAVGLL 146 (540)
T ss_dssp SEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSC---------------EEEEEEEEECCCSC
T ss_pred cCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCC---------------EEEeCEEEECCccc
Confidence 356677788888888888898 8999999999988765 7999999882 69999999999997
Q ss_pred chH
Q 023079 115 APA 117 (287)
Q Consensus 115 s~~ 117 (287)
+..
T Consensus 147 s~p 149 (540)
T 3gwf_A 147 SAI 149 (540)
T ss_dssp CSB
T ss_pred ccC
Confidence 644
No 79
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.62 E-value=0.0035 Score=58.78 Aligned_cols=59 Identities=14% Similarity=0.128 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
..+...+.+.++++|++|+++++|+++..+++++.|++.+|. ++.||.||+|+|.+.+.
T Consensus 223 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~---------------~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 223 ADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGR---------------TVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSC---------------EEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCc---------------EEEcCEEEECCCCCcCC
Confidence 467778888889999999999999999887767888877772 79999999999998765
No 80
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.62 E-value=0.0041 Score=57.86 Aligned_cols=70 Identities=16% Similarity=0.109 Sum_probs=53.2
Q ss_pred eeecHHHHHHHHHHHHHHCCcE--EEcCceeEEEEEeCC--eEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 39 GIVDSHSLMLSLVGEAENHGTT--FSNNTSVIGGHLEGN--CMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 39 g~vdp~~l~~~l~~~a~~~Gv~--~~~~~~V~~i~~~~~--~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
..+....+...+.+.+++.|++ ++++++|+++...++ .|.|++.++.++ +..++++|.||+|+|.+
T Consensus 96 ~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g----------~~~~~~~d~VVvAtG~~ 165 (464)
T 2xve_A 96 SYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTD----------TIYSEEFDYVVCCTGHF 165 (464)
T ss_dssp SSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTT----------EEEEEEESEEEECCCSS
T ss_pred CCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCC----------ceEEEEcCEEEECCCCC
Confidence 3556677888888888888988 899999999998765 788887653111 12379999999999987
Q ss_pred chHH
Q 023079 115 APAL 118 (287)
Q Consensus 115 s~~l 118 (287)
+...
T Consensus 166 s~p~ 169 (464)
T 2xve_A 166 STPY 169 (464)
T ss_dssp SSBC
T ss_pred CCCc
Confidence 6543
No 81
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.60 E-value=0.0028 Score=55.63 Aligned_cols=59 Identities=20% Similarity=0.273 Sum_probs=50.4
Q ss_pred ecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 41 VDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 41 vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
+++..+...+.+.+++.|++++.++ |+++..+++.|.|++ ++. ++++|+||+|+|.++.
T Consensus 67 ~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~---------------~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 67 ILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSK---------------AILADAVILAIGAVAK 125 (333)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSE---------------EEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCc---------------EEEcCEEEECCCCCcC
Confidence 6778889999888999999999886 999988777888888 552 7999999999999854
No 82
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.60 E-value=0.0036 Score=58.08 Aligned_cols=59 Identities=7% Similarity=0.027 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 43 SHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 43 p~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
+..+...+.+.++++|++++++++|+++..+++.+.|+++++ ++.+|.||+|+|.+...
T Consensus 215 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~~----------------~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 215 DPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTTHG----------------ELRADKLLVATGRTPNT 273 (467)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEETTE----------------EEEESEEEECSCEEESC
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEECCc----------------EEEcCEEEECCCCCcCC
Confidence 356778888889999999999999999988777777887754 79999999999998763
No 83
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.60 E-value=0.0035 Score=57.87 Aligned_cols=65 Identities=14% Similarity=-0.068 Sum_probs=50.0
Q ss_pred ecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecC---CcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 41 VDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISE---SKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 41 vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~---g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
.....+...|...+++.+..++++++|++++..++.|.|++.+ |. ...++++|.||+|+|.++..
T Consensus 112 ~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~------------~~~~~~~d~VVvAtG~~s~p 179 (447)
T 2gv8_A 112 PHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGS------------PISKDIFDAVSICNGHYEVP 179 (447)
T ss_dssp CBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTC------------CEEEEEESEEEECCCSSSSB
T ss_pred CCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCC------------eeEEEEeCEEEECCCCCCCC
Confidence 3455666667677777788899999999999888889988765 41 01369999999999998653
No 84
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.57 E-value=0.0061 Score=58.93 Aligned_cols=63 Identities=17% Similarity=0.137 Sum_probs=50.7
Q ss_pred cHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeE-EEEe---cCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 42 DSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCM-NVYI---SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 42 dp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~-~V~t---~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
.+..++.+|.+.+.+.|++|+++++|+++..+++++ .|.+ .+| +...+.|+.||+|+|.|+..
T Consensus 153 tG~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G-------------~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 153 TGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDG-------------TIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTC-------------CEEEEEEEEEEECCCCCGGG
T ss_pred CHHHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCC-------------cEEEEEcCeEEECCCccccc
Confidence 457899999999999999999999999998877654 3544 344 23479999999999999864
No 85
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.52 E-value=0.0051 Score=54.39 Aligned_cols=51 Identities=16% Similarity=0.095 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 45 SLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 45 ~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
.++.+|++. .|++++++++|+++..++++|.|++.+|. +++||.||+|+.+
T Consensus 113 ~l~~~l~~~---~g~~i~~~~~V~~i~~~~~~~~v~~~~g~---------------~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 113 SIIKHYLKE---SGAEVYFRHRVTQINLRDDKWEVSKQTGS---------------PEQFDLIVLTMPV 163 (342)
T ss_dssp HHHHHHHHH---HTCEEESSCCEEEEEECSSSEEEEESSSC---------------CEEESEEEECSCH
T ss_pred HHHHHHHHh---cCCEEEeCCEEEEEEEcCCEEEEEECCCC---------------EEEcCEEEECCCH
Confidence 444555433 38999999999999998889999998872 5899999999974
No 86
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.51 E-value=0.0028 Score=59.15 Aligned_cols=60 Identities=10% Similarity=-0.010 Sum_probs=48.7
Q ss_pred ecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeE-EEEe--cCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 41 VDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCM-NVYI--SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 41 vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~-~V~t--~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
..+..++..|.+.+++.|++++++++| ++..+++.+ .|.. .+| +++||.||+|+|.++..
T Consensus 116 ~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g----------------~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 116 ETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGL----------------VEDVDKLVLATGGYSYL 178 (472)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEE----------------ECCCSEEEECCCCCGGG
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCC----------------eEEeeeEEECCCCCccc
Confidence 457889999999998889999999999 998777765 2433 334 67899999999999864
No 87
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.49 E-value=0.012 Score=56.99 Aligned_cols=70 Identities=11% Similarity=0.126 Sum_probs=55.9
Q ss_pred eeecHHHHHHHHHHHHHHCCc--EEEcCceeEEEEEeCC----eEEEEec------CCcccccCCCCCCCCCceeEecCE
Q 023079 39 GIVDSHSLMLSLVGEAENHGT--TFSNNTSVIGGHLEGN----CMNVYIS------ESKNLRNWDGVSPLQPELTLIPKL 106 (287)
Q Consensus 39 g~vdp~~l~~~l~~~a~~~Gv--~~~~~~~V~~i~~~~~----~~~V~t~------~g~~~~~~~~~~~~~~~~~i~a~~ 106 (287)
..++...+...|.+.+++.|+ +++.+++|+++..+++ .+.|++. +| .+.+++||.
T Consensus 136 ~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G-------------~~~~i~a~~ 202 (639)
T 2dkh_A 136 VILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAG-------------QIETVQARY 202 (639)
T ss_dssp EECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTT-------------CEEEEEEEE
T ss_pred EeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCC-------------CeEEEEeCE
Confidence 356778999999999999987 9999999999988652 5776654 33 124799999
Q ss_pred EEEcCCCCchHHHHHh
Q 023079 107 VVNSAGLSAPALAKRF 122 (287)
Q Consensus 107 VV~aaG~~s~~l~~~~ 122 (287)
||.|.|++|. +.+.+
T Consensus 203 vVgADG~~S~-vR~~l 217 (639)
T 2dkh_A 203 VVGCDGARSN-VRRAI 217 (639)
T ss_dssp EEECCCTTCH-HHHHT
T ss_pred EEECCCcchH-HHHHh
Confidence 9999999986 66666
No 88
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=96.46 E-value=0.0079 Score=54.38 Aligned_cols=64 Identities=13% Similarity=0.186 Sum_probs=50.5
Q ss_pred ecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHH
Q 023079 41 VDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAK 120 (287)
Q Consensus 41 vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~ 120 (287)
++-..+...|.+.+ .|++++++++|+++..++++|.|++.+|. +++||.||.|.|.+|. +.+
T Consensus 96 ~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~---------------~~~ad~vV~AdG~~S~-vr~ 157 (397)
T 2vou_A 96 TSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSETVQMRFSDGT---------------KAEANWVIGADGGASV-VRK 157 (397)
T ss_dssp EEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSCEEEEETTSC---------------EEEESEEEECCCTTCH-HHH
T ss_pred cCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCEEEEEECCCC---------------EEECCEEEECCCcchh-HHH
Confidence 34456666665554 58999999999999988888999998873 7999999999999985 344
Q ss_pred Hh
Q 023079 121 RF 122 (287)
Q Consensus 121 ~~ 122 (287)
.+
T Consensus 158 ~~ 159 (397)
T 2vou_A 158 RL 159 (397)
T ss_dssp HH
T ss_pred Hh
Confidence 44
No 89
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.44 E-value=0.0063 Score=55.48 Aligned_cols=64 Identities=20% Similarity=0.244 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch-HHHHHh
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP-ALAKRF 122 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~-~l~~~~ 122 (287)
..+...+.+.++++|++|+++++|.++..++....|++.+|. ++.||.||+|+|...+ .+++.+
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~---------------~i~aD~Vv~a~G~~p~~~l~~~~ 249 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGR---------------SFVADSALICVGAEPADQLARQA 249 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSC---------------EEECSEEEECSCEEECCHHHHHT
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCC---------------EEEcCEEEEeeCCeecHHHHHhC
Confidence 456677778888999999999999999876544578888883 7999999999999877 466666
No 90
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.44 E-value=0.016 Score=54.95 Aligned_cols=69 Identities=14% Similarity=0.178 Sum_probs=52.5
Q ss_pred eecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHH
Q 023079 40 IVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALA 119 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~ 119 (287)
.++-..+...|.+.+.+. ++++++|++++.+++++.|++.+..+| ++.+++||+||.|.|.+|. +.
T Consensus 134 ~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G----------~~~~i~a~~vVgADG~~S~-vR 199 (549)
T 2r0c_A 134 ICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTG----------ATRAVHARYLVACDGASSP-TR 199 (549)
T ss_dssp ECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTC----------CEEEEEEEEEEECCCTTCH-HH
T ss_pred ccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCC----------CEEEEEeCEEEECCCCCcH-HH
Confidence 456667777888888776 889999999998888888776551101 1247999999999999987 66
Q ss_pred HHh
Q 023079 120 KRF 122 (287)
Q Consensus 120 ~~~ 122 (287)
+.+
T Consensus 200 ~~l 202 (549)
T 2r0c_A 200 KAL 202 (549)
T ss_dssp HHH
T ss_pred HHc
Confidence 666
No 91
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.43 E-value=0.004 Score=56.40 Aligned_cols=60 Identities=12% Similarity=0.072 Sum_probs=49.2
Q ss_pred eecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 40 IVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
.++-..+...|.+.+. +++++++++|++++.++++|.|++.+|. +++||.||.|.|.+|.
T Consensus 124 ~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~---------------~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 124 EINRNDLRAILLNSLE--NDTVIWDRKLVMLEPGKKKWTLTFENKP---------------SETADLVILANGGMSK 183 (398)
T ss_dssp EECHHHHHHHHHHTSC--TTSEEESCCEEEEEECSSSEEEEETTSC---------------CEEESEEEECSCTTCS
T ss_pred eECHHHHHHHHHhhcC--CCEEEECCEEEEEEECCCEEEEEECCCc---------------EEecCEEEECCCcchh
Confidence 4566777777776554 3688899999999988888999988873 7999999999999985
No 92
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.41 E-value=0.007 Score=55.93 Aligned_cols=59 Identities=14% Similarity=0.062 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
..+...+.+.++++|++++++++|++++.+++++.|++.+|. ++.+|.||+|+|.+...
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~---------------~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGE---------------VLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSC---------------EEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCe---------------EEEcCEEEECcCCCcCC
Confidence 466777888888899999999999999988778888877662 79999999999988764
No 93
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=96.41 E-value=0.0076 Score=56.21 Aligned_cols=59 Identities=19% Similarity=0.219 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
..+...+.+.+++.|++++.+++|++++.+++++.|++.+|. ++.||.||+|+|.....
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~---------------~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQ---------------TICADRVMLATGRVPNT 290 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSC---------------EEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCc---------------EEEcCEEEEeeCCCcCC
Confidence 457777888888999999999999999988778888888873 79999999999986554
No 94
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.39 E-value=0.0065 Score=52.62 Aligned_cols=61 Identities=8% Similarity=0.033 Sum_probs=50.9
Q ss_pred eecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeC---CeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 40 IVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEG---NCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~---~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
..++..+...+.+.+++.|++++.+++|+++..+. +.|.|++++|. ++++|+||+|+|.+.
T Consensus 52 ~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~---------------~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 52 KTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGA---------------VLKARSIIVATGAKW 115 (310)
T ss_dssp SEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSC---------------EEEEEEEEECCCEEE
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCC---------------EEEeCEEEECcCCCc
Confidence 45677888888888888999999999999997653 36889888772 799999999999864
No 95
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.34 E-value=0.0026 Score=59.10 Aligned_cols=57 Identities=16% Similarity=0.144 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHC--------CcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 44 HSLMLSLVGEAENH--------GTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 44 ~~l~~~l~~~a~~~--------Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
..++.+|++.+.+. |++++.+++|++|..+++++.|++.+|. +++||+||+|++++.
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~---------------~~~ad~vI~a~~~~~ 270 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNS---------------VYSADYVMVSASLGV 270 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSC---------------EEEESEEEECSCHHH
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCC---------------EEEcCEEEEecCHHH
Confidence 36677777665544 7899999999999998888999998883 799999999999753
No 96
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.33 E-value=0.0088 Score=52.12 Aligned_cols=60 Identities=13% Similarity=0.099 Sum_probs=50.0
Q ss_pred eecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 40 IVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
.++...+...+.+.+++.|++++. .+|+++..+++.|.|.++++ ++++|+||+|+|.+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~~----------------~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 68 SIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGGFDIETNDD----------------TYHAKYVIITTGTTHK 127 (319)
T ss_dssp SBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTEEEEEESSS----------------EEEEEEEEECCCEEEC
T ss_pred ccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEECCC----------------EEEeCEEEECCCCCcc
Confidence 456778888888888999999988 78999988888888887443 7999999999998643
No 97
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.32 E-value=0.008 Score=57.18 Aligned_cols=63 Identities=16% Similarity=0.167 Sum_probs=52.0
Q ss_pred eecHHHHHHHHHHHHHHCCc--EEEcCceeEEEEEeCC--eEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 40 IVDSHSLMLSLVGEAENHGT--TFSNNTSVIGGHLEGN--CMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv--~~~~~~~V~~i~~~~~--~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
..+...+...+.+.+++.|+ .++++++|+++..+++ .|.|++++|. +++||+||+|+|.++
T Consensus 95 ~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~---------------~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 95 YATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGD---------------EVSARFLVVAAGPLS 159 (549)
T ss_dssp SCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCC---------------EEEEEEEEECCCSEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCC---------------EEEeCEEEECcCCCC
Confidence 45667777777778888888 8999999999987754 7999998882 699999999999876
Q ss_pred hH
Q 023079 116 PA 117 (287)
Q Consensus 116 ~~ 117 (287)
..
T Consensus 160 ~p 161 (549)
T 4ap3_A 160 NA 161 (549)
T ss_dssp EC
T ss_pred CC
Confidence 43
No 98
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.28 E-value=0.0079 Score=55.55 Aligned_cols=58 Identities=14% Similarity=0.142 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 43 SHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 43 p~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
+..+...+.+.+++.|++|+++++|++++..++++.|+++++ ++.||.||+|+|...+
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g----------------~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ----------------EISCDSGIFALNLHPQ 245 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC----------------EEEESEEEECSCCBCC
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC----------------EEEeCEEEECcCCCCC
Confidence 356777788888999999999999999987777778888766 7999999999997543
No 99
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=96.26 E-value=0.0029 Score=58.64 Aligned_cols=65 Identities=23% Similarity=0.145 Sum_probs=48.7
Q ss_pred eeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEe---cCCcccccCCCCCCCCCceeEecCEE
Q 023079 31 KALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYI---SESKNLRNWDGVSPLQPELTLIPKLV 107 (287)
Q Consensus 31 ~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t---~~g~~~~~~~~~~~~~~~~~i~a~~V 107 (287)
.+.+.+.+| ...++.+|++.+ |++++++++|++|..++++|.|++ .+|. +++||+|
T Consensus 228 ~~~~~~~gG---~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~---------------~~~ad~v 286 (478)
T 2ivd_A 228 GALSTFDGG---LQVLIDALAASL---GDAAHVGARVEGLAREDGGWRLIIEEHGRRA---------------ELSVAQV 286 (478)
T ss_dssp CCEEEETTC---THHHHHHHHHHH---GGGEESSEEEEEEECC--CCEEEEEETTEEE---------------EEECSEE
T ss_pred ccEEEECCC---HHHHHHHHHHHh---hhhEEcCCEEEEEEecCCeEEEEEeecCCCc---------------eEEcCEE
Confidence 445556665 356777776655 789999999999998877888887 5552 7999999
Q ss_pred EEcCCCCch
Q 023079 108 VNSAGLSAP 116 (287)
Q Consensus 108 V~aaG~~s~ 116 (287)
|+|++++..
T Consensus 287 V~a~~~~~~ 295 (478)
T 2ivd_A 287 VLAAPAHAT 295 (478)
T ss_dssp EECSCHHHH
T ss_pred EECCCHHHH
Confidence 999998753
No 100
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=96.23 E-value=0.0089 Score=54.31 Aligned_cols=69 Identities=12% Similarity=0.110 Sum_probs=53.7
Q ss_pred eeecHHHHHHHHHHHHHH-CC-cEEEcCceeEEEEEeCCeEEEEecC---CcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 39 GIVDSHSLMLSLVGEAEN-HG-TTFSNNTSVIGGHLEGNCMNVYISE---SKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 39 g~vdp~~l~~~l~~~a~~-~G-v~~~~~~~V~~i~~~~~~~~V~t~~---g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
..++...+...|.+.+.+ .| ++++++++|+++.. ++++.|++.+ |. +.+++||.||.|.|.
T Consensus 102 ~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~-------------~~~~~ad~vV~AdG~ 167 (410)
T 3c96_A 102 YSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGK-------------PQALGADVLVGADGI 167 (410)
T ss_dssp EEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSC-------------EEEEEESEEEECCCT
T ss_pred eeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCC-------------ceEEecCEEEECCCc
Confidence 467778899999988876 36 58999999999988 6778777654 41 237999999999999
Q ss_pred CchHHHHHh
Q 023079 114 SAPALAKRF 122 (287)
Q Consensus 114 ~s~~l~~~~ 122 (287)
+|.- .+.+
T Consensus 168 ~S~v-R~~l 175 (410)
T 3c96_A 168 HSAV-RAHL 175 (410)
T ss_dssp TCHH-HHHH
T ss_pred cchh-HHHh
Confidence 9864 3444
No 101
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=96.23 E-value=0.0074 Score=56.65 Aligned_cols=65 Identities=14% Similarity=0.087 Sum_probs=51.1
Q ss_pred eecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEe---CCeEEEEec---CCcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 40 IVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLE---GNCMNVYIS---ESKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~---~~~~~V~t~---~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
.++...+...|.+.+++.|++++++++|+++... ++.+.|++. +|. ..+++||.||+|+|.
T Consensus 162 ~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~-------------~~~i~ad~VV~A~G~ 228 (497)
T 2bry_A 162 HISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQ-------------LASYEFDVLISAAGG 228 (497)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHH-------------HHTCCBSEEEECCCT
T ss_pred cCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCC-------------EEEEEcCEEEECCCC
Confidence 3566788888999999999999999999999874 346777763 331 126999999999999
Q ss_pred CchH
Q 023079 114 SAPA 117 (287)
Q Consensus 114 ~s~~ 117 (287)
++.-
T Consensus 229 ~S~~ 232 (497)
T 2bry_A 229 KFVP 232 (497)
T ss_dssp TCCC
T ss_pred Cccc
Confidence 8754
No 102
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.23 E-value=0.0054 Score=53.73 Aligned_cols=45 Identities=9% Similarity=-0.088 Sum_probs=38.1
Q ss_pred CcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 58 GTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 58 Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
|++++++++|++++.++++|.|++++|. ...+||.||+|+|+.+.
T Consensus 119 g~~i~~~~~v~~i~~~~~~~~v~~~~g~--------------~~~~a~~vV~a~g~~~~ 163 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGEEHWNLLDAEGQ--------------NHGPFSHVIIATPAPQA 163 (336)
T ss_dssp TCCEECSCCEEEEEECSSCEEEEETTSC--------------EEEEESEEEECSCHHHH
T ss_pred cCcEEecCEEEEEEEeCCEEEEEeCCCc--------------CccccCEEEEcCCHHHH
Confidence 8999999999999998889999998882 12359999999998643
No 103
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.17 E-value=0.013 Score=54.94 Aligned_cols=65 Identities=15% Similarity=0.159 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch-HHHHH
Q 023079 43 SHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP-ALAKR 121 (287)
Q Consensus 43 p~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~-~l~~~ 121 (287)
|..+...+.+.++++|++++++++|+++..+++.+.|++.+|. ++.||.||+|+|...+ .+++.
T Consensus 225 ~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~---------------~i~aD~Vv~a~G~~pn~~l~~~ 289 (493)
T 1m6i_A 225 PEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGR---------------KVETDHIVAAVGLEPNVELAKT 289 (493)
T ss_dssp CHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSC---------------EEEESEEEECCCEEECCTTHHH
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCC---------------EEECCEEEECCCCCccHHHHHH
Confidence 4567777888888999999999999999877777788888873 7999999999998865 36666
Q ss_pred h
Q 023079 122 F 122 (287)
Q Consensus 122 ~ 122 (287)
+
T Consensus 290 ~ 290 (493)
T 1m6i_A 290 G 290 (493)
T ss_dssp H
T ss_pred c
Confidence 5
No 104
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=96.13 E-value=0.0086 Score=55.48 Aligned_cols=58 Identities=9% Similarity=0.105 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCe-EEEE-ecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNC-MNVY-ISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~-~~V~-t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
..+...+.+.++++|++|+.+++|.++..++++ +.|+ +++| ++.||.||+|+|.+.+.
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g----------------~i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHG----------------EIVADQVMLALGRMPNT 270 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSC----------------EEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCC----------------eEEeCEEEEeeCcccCC
Confidence 466788888899999999999999999887555 6788 8888 59999999999987654
No 105
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.06 E-value=0.015 Score=55.88 Aligned_cols=62 Identities=10% Similarity=0.087 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHCC-cEEEcCceeEEEEEeCCeE-EEEe---cCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 43 SHSLMLSLVGEAENHG-TTFSNNTSVIGGHLEGNCM-NVYI---SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 43 p~~l~~~l~~~a~~~G-v~~~~~~~V~~i~~~~~~~-~V~t---~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
...++..|.+.+.++| ++++++++|+++..+++++ .|.. .+| +...++|+.||+|+|.|+..
T Consensus 133 g~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G-------------~~~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 133 GFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEG-------------TLVQIRANAVVMATGGAGRV 199 (602)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTT-------------EEEEEECSCEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCC-------------cEEEEEcCeEEECCCCCccc
Confidence 5788999999999888 9999999999998877654 2332 445 12369999999999999865
No 106
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=96.05 E-value=0.0058 Score=55.70 Aligned_cols=51 Identities=18% Similarity=0.268 Sum_probs=41.0
Q ss_pred HHHHHH-HHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 49 SLVGEA-ENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 49 ~l~~~a-~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
.+++.+ ++.| +|+++++|++|+.+++++.|+|.+|. +++||+||+|+|+..
T Consensus 208 ~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~---------------~~~ad~vi~a~~~~~ 259 (431)
T 3k7m_X 208 DLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGH---------------AFQAHSVIVATPMNT 259 (431)
T ss_dssp HHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEETTSC---------------CEEEEEEEECSCGGG
T ss_pred HHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEECCCC---------------EEEeCEEEEecCcch
Confidence 344443 4557 99999999999988888999998882 699999999999643
No 107
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.99 E-value=0.017 Score=53.11 Aligned_cols=64 Identities=19% Similarity=0.197 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEE--eCCeE-EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch-HHH
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHL--EGNCM-NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP-ALA 119 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~--~~~~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~-~l~ 119 (287)
..+...+.+.++++|++++++++|+++.. +++++ .|++.+|. ++.||.||+|+|...+ .++
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~---------------~i~~D~Vv~a~G~~p~~~l~ 255 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGT---------------RLPADLVIAGIGLIPNCELA 255 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSC---------------EEECSEEEECCCEEECCHHH
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCC---------------EEEcCEEEECCCCCcCcchh
Confidence 45667778888899999999999999987 55555 68888773 7999999999998755 576
Q ss_pred HHh
Q 023079 120 KRF 122 (287)
Q Consensus 120 ~~~ 122 (287)
+.+
T Consensus 256 ~~~ 258 (431)
T 1q1r_A 256 SAA 258 (431)
T ss_dssp HHT
T ss_pred hcc
Confidence 666
No 108
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=95.97 E-value=0.01 Score=55.79 Aligned_cols=54 Identities=11% Similarity=-0.002 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
..++.+|++. .|++++.+++|++|..++++|.|++.+|. +++||+||+|++++.
T Consensus 215 ~~l~~~l~~~---lg~~i~~~~~V~~i~~~~~~v~v~~~~g~---------------~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 215 GQVSERIMDL---LGDRVKLERPVIYIDQTRENVLVETLNHE---------------MYEAKYVISAIPPTL 268 (520)
T ss_dssp HHHHHHHHHH---HGGGEESSCCEEEEECSSSSEEEEETTSC---------------EEEESEEEECSCGGG
T ss_pred HHHHHHHHHH---cCCcEEcCCeeEEEEECCCeEEEEECCCe---------------EEEeCEEEECCCHHH
Confidence 4556666543 48899999999999988888999998873 799999999999875
No 109
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=95.96 E-value=0.012 Score=55.04 Aligned_cols=59 Identities=10% Similarity=0.067 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCC-eEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGN-CMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~-~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
..+...+.+.++++|++|+++++|+++..+++ .+.|++.+|. ++.+|.||+|+|.+.+.
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~---------------~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGA---------------EADYDVVMLAIGRVPRS 290 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSC---------------EEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCc---------------EEEcCEEEEccCCCcCc
Confidence 45677788888999999999999999987654 4778888772 79999999999987664
No 110
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=95.95 E-value=0.016 Score=50.53 Aligned_cols=63 Identities=16% Similarity=0.215 Sum_probs=51.1
Q ss_pred eecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 40 IVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
.+.+..+...+.+.+++.|++++.++ |+++..+++.|.+.+....+++ ++++|.||+|+|.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~------------~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 80 GLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAE------------PVTTDAIILATGASA 142 (338)
T ss_dssp CEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSC------------CEEEEEEEECCCEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCc------------EEEeCEEEECcCCCc
Confidence 46678899999999999999999988 9999888888888874221112 799999999999854
No 111
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=95.93 E-value=0.015 Score=50.67 Aligned_cols=59 Identities=15% Similarity=0.129 Sum_probs=48.7
Q ss_pred ecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEe--CCe-EEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 41 VDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLE--GNC-MNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 41 vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~--~~~-~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
++...+...+.+.+++.|++++. .+|+++..+ ++. |.|.+.+|. ++++|+||+|+|.+.
T Consensus 62 ~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~---------------~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 62 IAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNG---------------EYRAKAVILATGADP 123 (325)
T ss_dssp BCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSC---------------EEEEEEEEECCCEEE
T ss_pred CCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCC---------------EEEeCEEEECcCCCc
Confidence 56778888888889999999987 689999876 444 788777772 799999999999864
No 112
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=95.89 E-value=0.0099 Score=54.54 Aligned_cols=52 Identities=8% Similarity=-0.045 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHCCcEEEcCceeEEEEEeCCe-EEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 45 SLMLSLVGEAENHGTTFSNNTSVIGGHLEGNC-MNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 45 ~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~-~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
.++.+|++ +.|++++++++|++|..++++ |.|++ +|. +++||+||+|++++.
T Consensus 216 ~l~~~l~~---~lg~~i~~~~~V~~i~~~~~~~v~v~~-~~~---------------~~~ad~VI~a~p~~~ 268 (453)
T 2yg5_A 216 QVSIRMAE---ALGDDVFLNAPVRTVKWNESGATVLAD-GDI---------------RVEASRVILAVPPNL 268 (453)
T ss_dssp HHHHHHHH---HHGGGEECSCCEEEEEEETTEEEEEET-TTE---------------EEEEEEEEECSCGGG
T ss_pred HHHHHHHH---hcCCcEEcCCceEEEEEeCCceEEEEE-CCe---------------EEEcCEEEEcCCHHH
Confidence 45555543 348899999999999998888 88887 441 799999999999874
No 113
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.87 E-value=0.021 Score=54.10 Aligned_cols=63 Identities=10% Similarity=0.148 Sum_probs=48.0
Q ss_pred eecHHHHHHHHHHHHHHCC--cEEEcCceeEEEEEeC--CeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 40 IVDSHSLMLSLVGEAENHG--TTFSNNTSVIGGHLEG--NCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~G--v~~~~~~~V~~i~~~~--~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
..+...+...+...+++.+ ..++++++|++++.++ +.|.|++++|. +++||+||+|+|.++
T Consensus 90 ~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~---------------~~~ad~vV~AtG~~s 154 (542)
T 1w4x_A 90 YASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGD---------------RIRARYLIMASGQLS 154 (542)
T ss_dssp SCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCC---------------EEEEEEEEECCCSCC
T ss_pred cCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCC---------------EEEeCEEEECcCCCC
Confidence 3444555555555566665 6789999999998764 47999998872 799999999999987
Q ss_pred hH
Q 023079 116 PA 117 (287)
Q Consensus 116 ~~ 117 (287)
..
T Consensus 155 ~p 156 (542)
T 1w4x_A 155 VP 156 (542)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 114
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.85 E-value=0.015 Score=55.27 Aligned_cols=65 Identities=9% Similarity=0.171 Sum_probs=51.0
Q ss_pred eeecHHHHHHHHHHHHHHCCc--EEEcCceeEEEEEeC--CeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 39 GIVDSHSLMLSLVGEAENHGT--TFSNNTSVIGGHLEG--NCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 39 g~vdp~~l~~~l~~~a~~~Gv--~~~~~~~V~~i~~~~--~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
...+...+...+.+.+++.|+ .++++++|+++...+ +.|.|++++|. +++||+||+|+|.+
T Consensus 82 ~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~---------------~~~ad~lV~AtG~~ 146 (545)
T 3uox_A 82 NFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEE---------------VVTCRFLISATGPL 146 (545)
T ss_dssp SSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTE---------------EEEEEEEEECCCSC
T ss_pred cCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCC---------------EEEeCEEEECcCCC
Confidence 345666777777777788887 788999999998754 47999998883 79999999999988
Q ss_pred chHH
Q 023079 115 APAL 118 (287)
Q Consensus 115 s~~l 118 (287)
+...
T Consensus 147 s~p~ 150 (545)
T 3uox_A 147 SASR 150 (545)
T ss_dssp BC--
T ss_pred CCCc
Confidence 7554
No 115
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.77 E-value=0.017 Score=54.49 Aligned_cols=62 Identities=10% Similarity=0.072 Sum_probs=51.6
Q ss_pred eecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEe---CCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 40 IVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLE---GNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~---~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
..++..+...+.+.+++.|++++.+++|+++..+ ++.+.|++++|. ++++|+||+|+|++..
T Consensus 263 ~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~---------------~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 263 KTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGA---------------VLKARSIIIATGAKWR 327 (521)
T ss_dssp SBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSC---------------EEEEEEEEECCCEEEC
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCC---------------EEEcCEEEECCCCCcC
Confidence 3567788888888899999999999999999764 236889988773 7999999999998653
No 116
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.69 E-value=0.023 Score=54.99 Aligned_cols=63 Identities=16% Similarity=0.109 Sum_probs=51.0
Q ss_pred eEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeC--CeEE-EEecCCcccccCCCCCCCCCceeEecCEEE
Q 023079 32 ALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEG--NCMN-VYISESKNLRNWDGVSPLQPELTLIPKLVV 108 (287)
Q Consensus 32 al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~--~~~~-V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV 108 (287)
+++.|.+| ...++++|.+.++.+|++++.+++|..|..++ +++. |++.+|. +++|++||
T Consensus 369 g~~yp~GG---~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge---------------~i~A~~VV 430 (650)
T 1vg0_A 369 PFLFPLYG---QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQ---------------RIISKHFI 430 (650)
T ss_dssp SEEEETTC---TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSC---------------EEECSEEE
T ss_pred ceEEeCCc---hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCC---------------EEEcCEEE
Confidence 66677777 36899999999999999999999999998876 5554 6666673 89999998
Q ss_pred EcCC
Q 023079 109 NSAG 112 (287)
Q Consensus 109 ~aaG 112 (287)
..+.
T Consensus 431 s~~~ 434 (650)
T 1vg0_A 431 IEDS 434 (650)
T ss_dssp EEGG
T ss_pred EChh
Confidence 7444
No 117
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.68 E-value=0.033 Score=51.59 Aligned_cols=59 Identities=10% Similarity=0.025 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 45 SLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 45 ~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
.+...+.+.++++|++++.+++|+++..+++++.|++.+|. + ++.+|.||+|+|...+.
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~-------------~-~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGT-------------R-LEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCC-------------E-EEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCc-------------E-EEEcCEEEECCCCCcCC
Confidence 56677778888999999999999999887777888888871 1 49999999999987654
No 118
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=95.68 E-value=0.02 Score=50.22 Aligned_cols=58 Identities=17% Similarity=0.193 Sum_probs=47.8
Q ss_pred ecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEE-EecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 41 VDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNV-YISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 41 vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V-~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
++...+...+.+.+++.|++++.++ |+++.. ++.|.| .+.++. ++++|+||+|+|.+.
T Consensus 68 ~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~---------------~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 68 ITGPELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQ---------------THRARAVILAMGAAA 126 (335)
T ss_dssp BCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSC---------------EEEEEEEEECCCEEE
T ss_pred CCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCC---------------EEEeCEEEECCCCCc
Confidence 5667888888888888999999886 888877 566788 777762 799999999999864
No 119
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.66 E-value=0.029 Score=51.75 Aligned_cols=58 Identities=9% Similarity=0.103 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHCCcEEEcCceeEEEEEeCCe-EEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 45 SLMLSLVGEAENHGTTFSNNTSVIGGHLEGNC-MNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 45 ~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~-~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
.+...+.+.++++|++++++++|++++.++++ +.|++.+|. ++.+|.||+|+|.....
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~---------------~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGR---------------SETVDCLIWAIGREPAN 267 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSC---------------EEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCc---------------EEEcCEEEECCCCCcCC
Confidence 56677778888899999999999999876544 778888772 79999999999987654
No 120
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.64 E-value=0.012 Score=55.72 Aligned_cols=63 Identities=16% Similarity=0.124 Sum_probs=44.4
Q ss_pred cHHHHHHHHHHHHHH-CCcEEEcCceeEEEEE-eCC------eE-EEEec---CCcccccCCCCCCCCCceeEecCEEEE
Q 023079 42 DSHSLMLSLVGEAEN-HGTTFSNNTSVIGGHL-EGN------CM-NVYIS---ESKNLRNWDGVSPLQPELTLIPKLVVN 109 (287)
Q Consensus 42 dp~~l~~~l~~~a~~-~Gv~~~~~~~V~~i~~-~~~------~~-~V~t~---~g~~~~~~~~~~~~~~~~~i~a~~VV~ 109 (287)
.+..++.+|.+.+++ .|++|+++++|+++.. +++ ++ .|.+. +| +...++|+.||+
T Consensus 136 ~g~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G-------------~~~~i~A~~VVl 202 (540)
T 1chu_A 136 TGREVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKE-------------TVETCHAKAVVL 202 (540)
T ss_dssp ------CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTT-------------EEEEEECSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCC-------------cEEEEEcCeEEE
Confidence 445778888888988 6999999999999987 434 44 35543 34 134799999999
Q ss_pred cCCCCchH
Q 023079 110 SAGLSAPA 117 (287)
Q Consensus 110 aaG~~s~~ 117 (287)
|+|.++..
T Consensus 203 AtGg~~~~ 210 (540)
T 1chu_A 203 ATGGASKV 210 (540)
T ss_dssp CCCCCGGG
T ss_pred CCCCcccc
Confidence 99999853
No 121
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=95.59 E-value=0.018 Score=55.80 Aligned_cols=64 Identities=13% Similarity=0.072 Sum_probs=49.4
Q ss_pred ecHHHHHHHHHHHHHHC-Cc-EEEcCceeEEEEEeCC---eEE-EEe---cCCcccccCCCCCCCCCceeEecCEEEEcC
Q 023079 41 VDSHSLMLSLVGEAENH-GT-TFSNNTSVIGGHLEGN---CMN-VYI---SESKNLRNWDGVSPLQPELTLIPKLVVNSA 111 (287)
Q Consensus 41 vdp~~l~~~l~~~a~~~-Gv-~~~~~~~V~~i~~~~~---~~~-V~t---~~g~~~~~~~~~~~~~~~~~i~a~~VV~aa 111 (287)
+++..+...|.+.+++. |+ +|++++.|+++..+++ ++. |.. .+| +...|.|+.||+|+
T Consensus 148 ~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g-------------~~~~i~A~~VVlAt 214 (643)
T 1jnr_A 148 IHGESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREP-------------KFYVFKAKAVILAT 214 (643)
T ss_dssp EEETTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSS-------------CEEEEECSEEEECC
T ss_pred CCcHHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCC-------------cEEEEEcCEEEECC
Confidence 45667888888888887 99 9999999999988765 543 442 344 12469999999999
Q ss_pred CCCchH
Q 023079 112 GLSAPA 117 (287)
Q Consensus 112 G~~s~~ 117 (287)
|.++..
T Consensus 215 GG~~~~ 220 (643)
T 1jnr_A 215 GGATLL 220 (643)
T ss_dssp CCBCSS
T ss_pred Cccccc
Confidence 999864
No 122
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=95.56 E-value=0.036 Score=51.84 Aligned_cols=58 Identities=16% Similarity=0.156 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHCCcEEEcCceeEEEEEeCC-eEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 45 SLMLSLVGEAENHGTTFSNNTSVIGGHLEGN-CMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 45 ~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~-~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
.+...+.+.++++|++|+++++|+++..+++ .+.|++.+|. ++.+|.||+|+|...+.
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~---------------~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGK---------------TLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSC---------------EEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCc---------------EEEcCEEEECCCCcccc
Confidence 5667777888999999999999999987654 4778888772 79999999999987553
No 123
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=95.54 E-value=0.41 Score=46.43 Aligned_cols=82 Identities=5% Similarity=-0.047 Sum_probs=54.0
Q ss_pred eecHHHHHHHHHHHHHHCC---cEEEcCceeEEEEEeC--------CeEEEEecCCc------------ccccCCC----
Q 023079 40 IVDSHSLMLSLVGEAENHG---TTFSNNTSVIGGHLEG--------NCMNVYISESK------------NLRNWDG---- 92 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~G---v~~~~~~~V~~i~~~~--------~~~~V~t~~g~------------~~~~~~~---- 92 (287)
.++-..+-..|.+.+++.| ++++.+++|+++...+ +.+.|+..++. ....|..
T Consensus 115 ~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 194 (665)
T 1pn0_A 115 VLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQ 194 (665)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHH
T ss_pred EeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEEEeccccccccccccccccccccccccc
Confidence 4667788888888888877 8999999999998764 35666543210 0000000
Q ss_pred -------------CCCCCCceeEecCEEEEcCCCCchHHHHHh
Q 023079 93 -------------VSPLQPELTLIPKLVVNSAGLSAPALAKRF 122 (287)
Q Consensus 93 -------------~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~ 122 (287)
+...+...+++||+||-|-|++|. +-+.+
T Consensus 195 ~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~-VR~~l 236 (665)
T 1pn0_A 195 TQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSW-VRRTL 236 (665)
T ss_dssp HHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCH-HHHHH
T ss_pred ccccccccccccccCCCCceEEEEeCEEEeccCCCCH-HHHhc
Confidence 001233457999999999999986 45556
No 124
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.46 E-value=0.044 Score=51.86 Aligned_cols=64 Identities=13% Similarity=0.147 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEE-------------------eCCeEEEEecCCcccccCCCCCCCCCceeEec
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHL-------------------EGNCMNVYISESKNLRNWDGVSPLQPELTLIP 104 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~-------------------~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a 104 (287)
..+...+.+.+++.|++++++++|.++.. .++++.+.+.+|. ++.|
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~---------------~i~~ 256 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGE---------------LLET 256 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSC---------------EEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCC---------------EEEc
Confidence 46677777888899999999999999987 3567777777772 7999
Q ss_pred CEEEEcCCCCch-HHHHHh
Q 023079 105 KLVVNSAGLSAP-ALAKRF 122 (287)
Q Consensus 105 ~~VV~aaG~~s~-~l~~~~ 122 (287)
|.||+|+|...+ .+++.+
T Consensus 257 D~vi~a~G~~p~~~l~~~~ 275 (565)
T 3ntd_A 257 DLLIMAIGVRPETQLARDA 275 (565)
T ss_dssp SEEEECSCEEECCHHHHHH
T ss_pred CEEEECcCCccchHHHHhC
Confidence 999999999876 566655
No 125
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=95.46 E-value=0.028 Score=48.71 Aligned_cols=58 Identities=14% Similarity=0.117 Sum_probs=47.6
Q ss_pred ecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 41 VDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 41 vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
+.+..+...+.+.+++.|++++.++ |+++..+++.|.| +.++. ++++|+||+|+|.+.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~v-~~~~~---------------~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 59 LTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRPFRL-NGDNG---------------EYTCDALIIATGASA 116 (320)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEEE-EESSC---------------EEEEEEEEECCCEEE
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEEE-EeCCC---------------EEEcCEEEECCCCCc
Confidence 5667888888888889999999886 8889877777888 55552 799999999999864
No 126
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.44 E-value=0.037 Score=50.30 Aligned_cols=61 Identities=21% Similarity=0.254 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch-HHHHH
Q 023079 43 SHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP-ALAKR 121 (287)
Q Consensus 43 p~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~-~l~~~ 121 (287)
+..+...+.+.++++|++++++++|++++ ++ .|++.+|. ++.||.||+|+|...+ .+++.
T Consensus 186 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~~--~v~~~~g~---------------~i~~D~vi~a~G~~p~~~l~~~ 246 (408)
T 2gqw_A 186 PATLADFVARYHAAQGVDLRFERSVTGSV--DG--VVLLDDGT---------------RIAADMVVVGIGVLANDALARA 246 (408)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESCCEEEEE--TT--EEEETTSC---------------EEECSEEEECSCEEECCHHHHH
T ss_pred CHHHHHHHHHHHHHcCcEEEeCCEEEEEE--CC--EEEECCCC---------------EEEcCEEEECcCCCccHHHHHh
Confidence 35667778888899999999999999998 33 67777772 7999999999998865 57776
Q ss_pred h
Q 023079 122 F 122 (287)
Q Consensus 122 ~ 122 (287)
+
T Consensus 247 ~ 247 (408)
T 2gqw_A 247 A 247 (408)
T ss_dssp H
T ss_pred C
Confidence 6
No 127
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=95.42 E-value=0.055 Score=46.78 Aligned_cols=65 Identities=15% Similarity=0.105 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeE-EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 43 SHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCM-NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 43 p~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
...+...+.+.+++.|++++.+++|+++..+++++ .|++.+..+ .+...++.+|.||+|+|...+
T Consensus 183 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~---------~g~~~~i~~D~vv~a~G~~p~ 248 (320)
T 1trb_A 183 EKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQN---------SDNIESLDVAGLFVAIGHSPN 248 (320)
T ss_dssp CHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTT---------CCCCEEEECSEEEECSCEEES
T ss_pred CHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccC---------CCceEEEEcCEEEEEeCCCCC
Confidence 34566677777888999999999999998776554 355544100 001237999999999997644
No 128
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.39 E-value=0.037 Score=51.42 Aligned_cols=60 Identities=7% Similarity=0.068 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCe--EEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNC--MNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~--~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
..+...+.+.+++.|++|+++++|++++.++++ +.|++++|. .++.+|.||+|+|...+.
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~--------------~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSK--------------SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSC--------------EEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCc--------------EEEEcCEEEECCCCCCcc
Confidence 456677778888899999999999999876544 678887771 179999999999975543
No 129
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=95.23 E-value=0.02 Score=51.95 Aligned_cols=44 Identities=9% Similarity=0.033 Sum_probs=38.3
Q ss_pred HHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 55 ENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 55 ~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
+..+.+++.+++|++|..+++++.|++.+| +++||+||+|++++
T Consensus 214 ~~l~~~v~~~~~V~~i~~~~~~v~v~~~~g----------------~~~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 214 ATLEHPAERNVDITRITREDGKVHIHTTDW----------------DRESDVLVLTVPLE 257 (424)
T ss_dssp HHSSSCCBCSCCEEEEECCTTCEEEEESSC----------------EEEESEEEECSCHH
T ss_pred HhhcceEEcCCEEEEEEEECCEEEEEECCC----------------eEEcCEEEECCCHH
Confidence 344678899999999998888899999888 79999999999986
No 130
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.17 E-value=0.076 Score=49.10 Aligned_cols=61 Identities=13% Similarity=0.161 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEec-C--CcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYIS-E--SKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~-~--g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
..+...+.+.+++.|++++.+++|++++.+++.+.|++. + |. +.++.+|.||+|+|.....
T Consensus 210 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~-------------~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 210 PETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGE-------------GEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCS-------------CEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCc-------------eeEEEcCEEEECCCcccCC
Confidence 456677778888999999999999999887777777765 4 51 2369999999999976543
No 131
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.17 E-value=0.043 Score=50.74 Aligned_cols=61 Identities=23% Similarity=0.358 Sum_probs=46.8
Q ss_pred HHHHHHHHHHH-HHCCcEEEcCceeEEEEEeCCeEEEEec--CCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 44 HSLMLSLVGEA-ENHGTTFSNNTSVIGGHLEGNCMNVYIS--ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 44 ~~l~~~l~~~a-~~~Gv~~~~~~~V~~i~~~~~~~~V~t~--~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
..+...+.+.+ +++|++++.+++|++++.+++++.|++. +|. ..++.+|.||+|+|...+.
T Consensus 215 ~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~-------------~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 215 EDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGK-------------RETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp HHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC----------------EEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCc-------------eEEEECCEEEECCCcccCC
Confidence 45667777888 8999999999999999887666766654 441 1279999999999987653
No 132
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.17 E-value=0.015 Score=55.21 Aligned_cols=66 Identities=18% Similarity=0.085 Sum_probs=47.0
Q ss_pred HHHHHHHHH-HCCcEEEcCceeEEEEEeC-CeE-EEEecCCcccccCCCCCCCCCceeEecC-EEEEcCCC-CchHHHHH
Q 023079 47 MLSLVGEAE-NHGTTFSNNTSVIGGHLEG-NCM-NVYISESKNLRNWDGVSPLQPELTLIPK-LVVNSAGL-SAPALAKR 121 (287)
Q Consensus 47 ~~~l~~~a~-~~Gv~~~~~~~V~~i~~~~-~~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~-~VV~aaG~-~s~~l~~~ 121 (287)
..+++..+. +.|+++++++.|+.|..++ +++ .|+..+..+ ++..+++|+ .||+|||+ ++++|+..
T Consensus 211 ~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~----------g~~~~i~A~k~VIlaaG~~~sp~lL~~ 280 (546)
T 2jbv_A 211 SVSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAF----------GHTHRLTARNEVVLSTGAIDTPKLLML 280 (546)
T ss_dssp HHHHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTT----------SCEEEEEEEEEEEECSHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCC----------CcEEEEEeCccEEEecCccCCchhhhh
Confidence 345555554 5699999999999999876 544 365433210 124579998 99999999 58888766
Q ss_pred h
Q 023079 122 F 122 (287)
Q Consensus 122 ~ 122 (287)
.
T Consensus 281 S 281 (546)
T 2jbv_A 281 S 281 (546)
T ss_dssp T
T ss_pred c
Confidence 5
No 133
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.14 E-value=0.057 Score=49.68 Aligned_cols=57 Identities=12% Similarity=0.154 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEE-EEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMN-VYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~-V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
..+...+.+.++++|++++++++|+++..+++++. |.+ +|. ++.||.||+|+|...+
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~---------------~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGK---------------EIKSDIAILCIGFRPN 248 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSC---------------EEEESEEEECCCEEEC
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCC---------------EEECCEEEECcCCCCC
Confidence 45677788888999999999999999987666665 555 552 7999999999997654
No 134
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.10 E-value=0.059 Score=50.05 Aligned_cols=63 Identities=17% Similarity=0.132 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch-HHHHHh
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP-ALAKRF 122 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~-~l~~~~ 122 (287)
..+...+.+.+++.|++++++++|+++..+++.+.|.++++ ++.||.||+|+|.... .+++.+
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~----------------~i~~D~vi~a~G~~p~~~~l~~~ 290 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETDKG----------------TYKADLVLVSVGVKPNTDFLEGT 290 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEETTE----------------EEECSEEEECSCEEESCGGGTTS
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECCC----------------EEEcCEEEECcCCCcChHHHHhC
Confidence 46677788888999999999999999987533334666554 7999999999998764 344433
No 135
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=95.09 E-value=0.019 Score=55.87 Aligned_cols=64 Identities=11% Similarity=0.096 Sum_probs=49.7
Q ss_pred eecHHHHHHHHHHHHHHC--CcEEEcCceeEEEEEeCC---eEE-EEe---cCCcccccCCCCCCCCCceeEecCEEEEc
Q 023079 40 IVDSHSLMLSLVGEAENH--GTTFSNNTSVIGGHLEGN---CMN-VYI---SESKNLRNWDGVSPLQPELTLIPKLVVNS 110 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~--Gv~~~~~~~V~~i~~~~~---~~~-V~t---~~g~~~~~~~~~~~~~~~~~i~a~~VV~a 110 (287)
.+++..+...|.+.++++ |++|++++.|+++..+++ ++. |.. .+| +...|.|+.||+|
T Consensus 162 ~~~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g-------------~~~~i~Ak~VVLA 228 (662)
T 3gyx_A 162 MINGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRAN-------------EVHIFKANAMVVA 228 (662)
T ss_dssp EEEETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSS-------------CEEEEECSEEEEC
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCC-------------cEEEEEeCEEEEC
Confidence 455678889999999887 999999999999988765 543 433 233 2346999999999
Q ss_pred CCCCch
Q 023079 111 AGLSAP 116 (287)
Q Consensus 111 aG~~s~ 116 (287)
||.++.
T Consensus 229 TGG~g~ 234 (662)
T 3gyx_A 229 CGGAVN 234 (662)
T ss_dssp CCCBCS
T ss_pred CCcccc
Confidence 999875
No 136
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.06 E-value=0.057 Score=49.98 Aligned_cols=60 Identities=15% Similarity=0.206 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCe-EEEEe-----cCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 43 SHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNC-MNVYI-----SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 43 p~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~-~~V~t-----~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
+..+...+.+.++++|++++++++|+++..++++ +.|+. .++ .++.+|.||+|+|...+
T Consensus 219 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~---------------~~i~~D~vv~a~G~~p~ 283 (474)
T 1zmd_A 219 DMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKA---------------EVITCDVLLVCIGRRPF 283 (474)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCC---------------EEEEESEEEECSCEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCc---------------eEEEcCEEEECcCCCcC
Confidence 3556777888889999999999999999887665 66663 233 27999999999998755
Q ss_pred H
Q 023079 117 A 117 (287)
Q Consensus 117 ~ 117 (287)
.
T Consensus 284 ~ 284 (474)
T 1zmd_A 284 T 284 (474)
T ss_dssp C
T ss_pred C
Confidence 3
No 137
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=95.00 E-value=0.025 Score=52.52 Aligned_cols=66 Identities=6% Similarity=0.130 Sum_probs=49.0
Q ss_pred eEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcC
Q 023079 32 ALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSA 111 (287)
Q Consensus 32 al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aa 111 (287)
.++.+.+|. ..++.+|++.+.+ ++++.+++|++|..++++|.|++.+|.. ..+++||+||+|+
T Consensus 230 ~~~~~~gG~---~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~v~v~~~~g~~------------~~~~~ad~vI~a~ 292 (489)
T 2jae_A 230 MMFTPVGGM---DRIYYAFQDRIGT--DNIVFGAEVTSMKNVSEGVTVEYTAGGS------------KKSITADYAICTI 292 (489)
T ss_dssp SEEEETTCT---THHHHHHHHHHCG--GGEETTCEEEEEEEETTEEEEEEEETTE------------EEEEEESEEEECS
T ss_pred cEEeecCCH---HHHHHHHHHhcCC--CeEEECCEEEEEEEcCCeEEEEEecCCe------------EEEEECCEEEECC
Confidence 455555553 4677777665432 7899999999999998999998876510 1279999999999
Q ss_pred CCC
Q 023079 112 GLS 114 (287)
Q Consensus 112 G~~ 114 (287)
.++
T Consensus 293 p~~ 295 (489)
T 2jae_A 293 PPH 295 (489)
T ss_dssp CHH
T ss_pred CHH
Confidence 875
No 138
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.94 E-value=0.071 Score=49.81 Aligned_cols=59 Identities=12% Similarity=0.142 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCC-eEEEEecCCcccccCCCCCCCCCcee-EecCEEEEcCCCCchH
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGN-CMNVYISESKNLRNWDGVSPLQPELT-LIPKLVVNSAGLSAPA 117 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~-~~~V~t~~g~~~~~~~~~~~~~~~~~-i~a~~VV~aaG~~s~~ 117 (287)
..+...+.+.++++|++++++++|++++.+++ .+.|++++|. + +.+|.||+|+|...+.
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~---------------~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGR---------------IYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSC---------------EEEEESEEEECCCBCCTT
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCc---------------EEEECCEEEECCCCCcCC
Confidence 35667777888999999999999999987643 4778888772 5 9999999999986554
No 139
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.94 E-value=0.028 Score=52.58 Aligned_cols=56 Identities=11% Similarity=0.022 Sum_probs=45.6
Q ss_pred HHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH-HHHHh
Q 023079 52 GEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA-LAKRF 122 (287)
Q Consensus 52 ~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~-l~~~~ 122 (287)
+.++++|++|+++++|+++..+++...|++.+|. ++.||.||+|+|.+.+. +++.+
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~---------------~i~aD~Vv~a~G~~p~~~l~~~~ 321 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNEKVERVIDMNNH---------------EYKVDALIFADGRRPDINPITQA 321 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSSSCCEEEETTCC---------------EEECSEEEECCCEEECCHHHHHT
T ss_pred HHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCe---------------EEEeCEEEECCCcCcCchHHHhc
Confidence 5677889999999999999865444457777772 79999999999999775 77777
No 140
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=94.93 E-value=0.046 Score=50.24 Aligned_cols=59 Identities=17% Similarity=0.035 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEe---CCeE--EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLE---GNCM--NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~---~~~~--~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
..+...+...+++.|++++++++|++++.. ++.| .|++.+|. +++.++++|+||+|+|.
T Consensus 127 ~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~-----------g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 127 MEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNAD-----------GEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETT-----------SCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCC-----------CceEEEEeCEEEECCCC
Confidence 344455555566779999999999999876 4444 67777662 22347999999999997
No 141
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=94.85 E-value=0.059 Score=49.89 Aligned_cols=60 Identities=10% Similarity=0.108 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
..+...+.+.+++.|++++.+++|++++.+++.+.|+..++.+ +.++.+|.||+|+|...
T Consensus 221 ~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g------------~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 221 EQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEG------------EKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSE------------EEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCC------------cEEEECCEEEEeeCCcc
Confidence 4567777788889999999999999999887777776655411 12799999999999754
No 142
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=94.73 E-value=0.045 Score=51.74 Aligned_cols=65 Identities=17% Similarity=0.048 Sum_probs=45.6
Q ss_pred HHHHHHHHH-CCcEEEcCceeEEEEEeCCeE-EEEecCCcccccCCCCCCCCCceeE---ecCEEEEcCCCC-chHHHHH
Q 023079 48 LSLVGEAEN-HGTTFSNNTSVIGGHLEGNCM-NVYISESKNLRNWDGVSPLQPELTL---IPKLVVNSAGLS-APALAKR 121 (287)
Q Consensus 48 ~~l~~~a~~-~Gv~~~~~~~V~~i~~~~~~~-~V~t~~g~~~~~~~~~~~~~~~~~i---~a~~VV~aaG~~-s~~l~~~ 121 (287)
.++++.+.+ .|+++++++.|+.|..+++++ .|+..+..+++ +.++ .++.||+|+|+| +++|+..
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~----------~~~~~v~~~~~VIlaaG~~~sp~lL~~ 268 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGP----------NGFIPVTPKGRVILSAGAFGTSRILFQ 268 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSG----------GGEEEEEEEEEEEECSHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCc----------eeEEEEEeCCEEEEcCChhcCHHHHHH
Confidence 446666665 589999999999999887665 47665411111 1123 899999999997 5677766
Q ss_pred h
Q 023079 122 F 122 (287)
Q Consensus 122 ~ 122 (287)
.
T Consensus 269 s 269 (546)
T 1kdg_A 269 S 269 (546)
T ss_dssp T
T ss_pred c
Confidence 5
No 143
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.72 E-value=0.063 Score=49.43 Aligned_cols=60 Identities=12% Similarity=0.143 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEec-CCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYIS-ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~-~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
..+...+.+.++++|++++.+++|++++.+++++.|++. +|. + .++.+|.||+|+|...+
T Consensus 211 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~-~------------~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 211 KQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGE-T------------KTIDADYVLVTVGRRPN 271 (455)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTE-E------------EEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCc-e------------eEEEcCEEEECcCCCcc
Confidence 456677777888999999999999999887777766654 221 1 27999999999998654
No 144
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=94.68 E-value=0.048 Score=50.67 Aligned_cols=59 Identities=14% Similarity=0.056 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecC----CcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISE----SKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~----g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
..+...+.+.++++|++|+++++|.+++.+++.+.|++.+ | + ++.+|.||+|+|...+.
T Consensus 226 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g---~------------~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 226 RDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPK---E------------PQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp HHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCS---S------------CEEESCEEECCCEEECG
T ss_pred HHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCc---e------------EEEcCEEEECcCCCcCC
Confidence 3556667777888999999999999998877777777665 4 2 68999999999987553
No 145
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=94.68 E-value=0.082 Score=49.17 Aligned_cols=65 Identities=18% Similarity=0.211 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 43 SHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 43 p~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
+..+...+.+.+++.|++++.+++|+++...++.+.|++.+..+ ++..++.+|.||+|+|...+.
T Consensus 238 d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~----------g~~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 238 DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKG----------GEATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTS----------CCCEEEEESEEEECCCCEECC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCC----------CceEEEEcCEEEEeeCCccCC
Confidence 34566777788889999999999999999888877766553110 012379999999999976443
No 146
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=94.64 E-value=0.034 Score=52.18 Aligned_cols=65 Identities=15% Similarity=0.055 Sum_probs=45.7
Q ss_pred HHHHHHHHHCC-cEEEcCceeEEEEEeC-C-eE-EEEec--CCcccccCCCCCCCCCceeEecCEEEEcCCCC-chHHHH
Q 023079 48 LSLVGEAENHG-TTFSNNTSVIGGHLEG-N-CM-NVYIS--ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS-APALAK 120 (287)
Q Consensus 48 ~~l~~~a~~~G-v~~~~~~~V~~i~~~~-~-~~-~V~t~--~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~-s~~l~~ 120 (287)
.+++..+++.| ++|++++.|+.|..++ + .+ .|+.. +|.. ++..+++|+.||+|||++ +++|+.
T Consensus 225 ~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~----------~~~~~v~A~~VIlaaG~~~s~~lL~ 294 (504)
T 1n4w_A 225 KTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKL----------LATKEISCRYLFLGAGSLGSTELLV 294 (504)
T ss_dssp TTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCE----------EEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcc----------ceeEEEeeCEEEEccCCCCCHHHHH
Confidence 44556666675 9999999999998874 3 33 46553 3310 013479999999999998 777766
Q ss_pred Hh
Q 023079 121 RF 122 (287)
Q Consensus 121 ~~ 122 (287)
..
T Consensus 295 ~S 296 (504)
T 1n4w_A 295 RA 296 (504)
T ss_dssp HH
T ss_pred hc
Confidence 55
No 147
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=94.58 E-value=0.13 Score=47.14 Aligned_cols=50 Identities=10% Similarity=0.066 Sum_probs=39.1
Q ss_pred CCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 57 HGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 57 ~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
.|++++.+++|+++..+++++.|++.+..+ ++..++.+|.||+|+|.-..
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~----------g~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGS----------GELSVETYDAVILATGYERQ 378 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTT----------CCEEEEEESEEEECCCEECC
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCC----------CCeEEEECCEEEEeeCCCCC
Confidence 599999999999999888888887762211 12346999999999998655
No 148
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=94.51 E-value=0.088 Score=48.73 Aligned_cols=61 Identities=15% Similarity=0.205 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEE--eCCeEEEEec---CCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHL--EGNCMNVYIS---ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~--~~~~~~V~t~---~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
..+...+.+.++++|++|+++++|+++.. +++.+.|++. +|. ..++.+|.||+|+|...+.
T Consensus 224 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~-------------~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 224 GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNK-------------QENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTE-------------EEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCC-------------ceEEECCEEEECCCCCcCC
Confidence 45667777888899999999999999987 5556666654 120 1279999999999976543
No 149
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=94.48 E-value=0.074 Score=48.82 Aligned_cols=57 Identities=19% Similarity=0.206 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
..+...+.+.+++.|++++++++|+++..++..+.|.++++ ++++|.||+|+|...+
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~----------------~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTDKN----------------AYDADLVVVAVGVRPN 247 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEESSC----------------EEECSEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEECCC----------------EEECCEEEECcCCCCC
Confidence 45677788888899999999999999986532235666433 7999999999998765
No 150
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=94.46 E-value=0.082 Score=48.76 Aligned_cols=60 Identities=15% Similarity=0.163 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEec-CCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYIS-ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~-~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
..+...+.+.++++|++++.+++|++++.+++.+.|++. +|. ..++.+|.||+|+|...+
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~-------------~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 212 ADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGV-------------AQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSC-------------EEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCc-------------eEEEEcCEEEECCCCCcc
Confidence 355666777888899999999999999877666766654 441 137999999999997654
No 151
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=94.42 E-value=0.018 Score=52.07 Aligned_cols=52 Identities=6% Similarity=0.035 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 45 SLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 45 ~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
.+...+.+.++++|++++.+++|++++.++. .|++++|. ++.+|++|+|+|+
T Consensus 63 ~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~---------------~~~yd~lvlAtG~ 114 (385)
T 3klj_A 63 DILIKKNDWYEKNNIKVITSEFATSIDPNNK--LVTLKSGE---------------KIKYEKLIIASGS 114 (385)
T ss_dssp GTBSSCHHHHHHTTCEEECSCCEEEEETTTT--EEEETTSC---------------EEECSEEEECCCE
T ss_pred HccCCCHHHHHHCCCEEEeCCEEEEEECCCC--EEEECCCC---------------EEECCEEEEecCC
Confidence 3333344556778999999999999987655 46777773 7999999999996
No 152
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.22 E-value=0.057 Score=48.86 Aligned_cols=60 Identities=7% Similarity=-0.012 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHh
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRF 122 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~ 122 (287)
..+...+.+.+++.|++++++++|++++. ++ |++++|. ++.+|.||+|+|...+.+++.+
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~~--v~~~~g~---------------~~~~D~vi~a~G~~~~~~l~~~ 277 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--HE--IVDEKGN---------------TIPADITILLPPYTGNPALKNS 277 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--SE--EEETTSC---------------EEECSEEEEECCEECCHHHHTS
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--Ce--EEECCCC---------------EEeeeEEEECCCCCccHHHHhc
Confidence 56778888888999999999999988854 33 6777773 7999999999999888776544
No 153
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=94.17 E-value=0.05 Score=51.07 Aligned_cols=65 Identities=12% Similarity=0.049 Sum_probs=46.0
Q ss_pred HHHHHHHHHCC-cEEEcCceeEEEEEeC-C-eE-EEEec--CCcccccCCCCCCCCCceeEecCEEEEcCCCC-chHHHH
Q 023079 48 LSLVGEAENHG-TTFSNNTSVIGGHLEG-N-CM-NVYIS--ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS-APALAK 120 (287)
Q Consensus 48 ~~l~~~a~~~G-v~~~~~~~V~~i~~~~-~-~~-~V~t~--~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~-s~~l~~ 120 (287)
.+++..|++.| ++|++++.|+.|..++ + .+ .|+.. +|.. ++..+++|+.||+|||++ +++|+.
T Consensus 230 ~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~----------~~~~~~~A~~VIlaaGa~~sp~lL~ 299 (507)
T 1coy_A 230 KTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNV----------VATKVVTADRVFFAAGSVGTSKLLV 299 (507)
T ss_dssp TTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCE----------EEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcc----------cccEEEEeCEEEEccCccCCHHHHH
Confidence 45566666664 9999999999998875 3 33 46553 3310 013479999999999998 777776
Q ss_pred Hh
Q 023079 121 RF 122 (287)
Q Consensus 121 ~~ 122 (287)
..
T Consensus 300 ~S 301 (507)
T 1coy_A 300 SM 301 (507)
T ss_dssp HH
T ss_pred hc
Confidence 55
No 154
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=94.00 E-value=0.18 Score=47.78 Aligned_cols=56 Identities=14% Similarity=0.073 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
..+...+.+.+++.|+++++++.|..+...++.+.|.+.++. ++.+|.|++|+|--
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~---------------~~~~D~vLvAvGR~ 318 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKT---------------SELYDTVLYAIGRK 318 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSC---------------EEEESEEEECSCEE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCC---------------eEEEEEEEEccccc
Confidence 356677888889999999999999999999888888887773 78899999999964
No 155
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.99 E-value=0.082 Score=48.77 Aligned_cols=60 Identities=18% Similarity=0.286 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEec---CCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYIS---ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~---~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
..+...+.+.++++|++++.+++|.++..+++++.|++. +|. ..++.+|.||+|+|...+
T Consensus 218 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~-------------~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 218 AEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGE-------------QTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp HHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCC-------------CEEEEESEEECCCCEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCc-------------ceEEECCEEEECCCCCcC
Confidence 456677788889999999999999999876666666654 331 137999999999998754
No 156
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=93.98 E-value=0.073 Score=52.73 Aligned_cols=42 Identities=14% Similarity=0.158 Sum_probs=37.7
Q ss_pred CCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 57 HGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 57 ~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
.|++|+++++|++|..++++|.|++.+|. +++||+||+|+.+
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~~~G~---------------~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTTTDGT---------------GYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEETTCC---------------EEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEECCCc---------------EEEcCEEEECCCH
Confidence 48899999999999998888999998883 7999999999975
No 157
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=93.93 E-value=0.12 Score=47.93 Aligned_cols=62 Identities=13% Similarity=0.115 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCC-eEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGN-CMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~-~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
..+...+.+.++++|++|+.+++|.++...++ .+.|++.++.+ ++..++.+|.||+|+|...
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~----------~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVET----------GEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTT----------CCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCC----------CceeEEEcCEEEECccccc
Confidence 45667777888899999999999999987654 46677665521 1234799999999999753
No 158
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=93.89 E-value=0.048 Score=51.07 Aligned_cols=57 Identities=11% Similarity=0.011 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHCCcEEEcCceeEEEEEe-CCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 43 SHSLMLSLVGEAENHGTTFSNNTSVIGGHLE-GNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 43 p~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~-~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
...++.+|++.+. +++|+.+++|++|... ++.+.|++.+|. +++||+||+|++++..
T Consensus 201 ~~~l~~~l~~~l~--~~~i~~~~~V~~I~~~~~~~v~v~~~~g~---------------~~~ad~VI~t~p~~~l 258 (516)
T 1rsg_A 201 YDSVVQRIAQSFP--QNWLKLSCEVKSITREPSKNVTVNCEDGT---------------VYNADYVIITVPQSVL 258 (516)
T ss_dssp HHHHHHHHHTTSC--GGGEETTCCEEEEEECTTSCEEEEETTSC---------------EEEEEEEEECCCHHHH
T ss_pred HHHHHHHHHHhCC--CCEEEECCEEEEEEEcCCCeEEEEECCCc---------------EEECCEEEECCCHHHh
Confidence 3444454443321 3679999999999986 567899998882 6999999999987543
No 159
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=93.87 E-value=0.21 Score=43.33 Aligned_cols=65 Identities=12% Similarity=0.016 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEec---CCcccccCCCCCCCCCceeEecCEEEEcCCCCch-HHHH
Q 023079 45 SLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYIS---ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP-ALAK 120 (287)
Q Consensus 45 ~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~---~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~-~l~~ 120 (287)
.+...+.+.+++.|++++.+++|.++..+++...|++. +|. ..++.+|.||+|+|.... .+++
T Consensus 192 ~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~-------------~~~i~~D~vi~a~G~~p~~~~l~ 258 (335)
T 2zbw_A 192 ASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQE-------------ELALEVDAVLILAGYITKLGPLA 258 (335)
T ss_dssp HHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCC-------------EEEEECSEEEECCCEEEECGGGG
T ss_pred HHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCc-------------eEEEecCEEEEeecCCCCchHhh
Confidence 45666777778889999999999999875432245544 441 237999999999998765 3444
Q ss_pred Hh
Q 023079 121 RF 122 (287)
Q Consensus 121 ~~ 122 (287)
.+
T Consensus 259 ~~ 260 (335)
T 2zbw_A 259 NW 260 (335)
T ss_dssp GS
T ss_pred hc
Confidence 33
No 160
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=93.79 E-value=0.2 Score=44.61 Aligned_cols=68 Identities=10% Similarity=0.112 Sum_probs=47.8
Q ss_pred cHHHHHHHHHHHHHH-CCcEEEcCceeEEEEEeC-----------------C--eE-EEEec------CCcccccCCCCC
Q 023079 42 DSHSLMLSLVGEAEN-HGTTFSNNTSVIGGHLEG-----------------N--CM-NVYIS------ESKNLRNWDGVS 94 (287)
Q Consensus 42 dp~~l~~~l~~~a~~-~Gv~~~~~~~V~~i~~~~-----------------~--~~-~V~t~------~g~~~~~~~~~~ 94 (287)
+...++..|.+.+.+ .|+++++++.|+++..++ + ++ .|.+. .+. +.
T Consensus 158 ~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~-------~~ 230 (344)
T 3jsk_A 158 HAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHD-------DQ 230 (344)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSS-------SS
T ss_pred cHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCC-------cc
Confidence 467888999999988 499999999999998765 2 33 24331 220 00
Q ss_pred CCCCceeEecCEEEEcCCCCch
Q 023079 95 PLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 95 ~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
....+.+|+|+.||+|+|..+.
T Consensus 231 ~~~d~~~i~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 231 SAMDPNTINAPVIISTTGHDGP 252 (344)
T ss_dssp SCCBCEEEECSEEEECCCSSSS
T ss_pred cccCceEEEcCEEEECCCCCch
Confidence 0112458999999999999876
No 161
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=93.73 E-value=0.087 Score=48.86 Aligned_cols=57 Identities=11% Similarity=0.077 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
..++.+|++.+. .+++.+++|++|..++++|.|++.+|.. ...+++||+||+|++.+
T Consensus 241 ~~l~~~l~~~l~---~~i~~~~~V~~I~~~~~~v~v~~~~~~~-----------~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 241 DKLPTAMYRDIQ---DKVHFNAQVIKIQQNDQKVTVVYETLSK-----------ETPSVTADYVIVCTTSR 297 (498)
T ss_dssp THHHHHHHHHTG---GGEESSCEEEEEEECSSCEEEEEECSSS-----------CCCEEEESEEEECSCHH
T ss_pred HHHHHHHHHhcc---cccccCCEEEEEEECCCeEEEEEecCCc-----------ccceEEeCEEEECCChH
Confidence 356666665443 3799999999999988889998877621 01148999999999975
No 162
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=93.56 E-value=0.16 Score=48.36 Aligned_cols=62 Identities=15% Similarity=0.184 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH-HHHHh
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA-LAKRF 122 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~-l~~~~ 122 (287)
..+...+.+.+++.|++++.+++|++++.+++. |++.+|. ++.+|.||+|+|...+. +++.+
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--v~~~~g~---------------~i~~D~Vi~a~G~~p~~~~l~~~ 290 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEENGAV--VRLKSGS---------------VIQTDMLILAIGVQPESSLAKGA 290 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTE--EEETTSC---------------EEECSEEEECSCEEECCHHHHHT
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecCCCE--EEECCCC---------------EEEcCEEEEccCCCCChHHHHhc
Confidence 566777888889999999999999999765553 6666662 79999999999987653 55554
No 163
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=93.55 E-value=0.09 Score=49.29 Aligned_cols=65 Identities=15% Similarity=0.047 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeE--EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHH
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCM--NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKR 121 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~--~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~ 121 (287)
..+...+.+.++++|++++++++|++++. +.+ .+.+.+|.. ...+|.||.||.|+|.-.+.+...
T Consensus 272 ~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~dg~~-----------~~~~i~ad~viwa~Gv~~~~~~~~ 338 (502)
T 4g6h_A 272 KKLSSYAQSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHEDGKI-----------TEETIPYGTLIWATGNKARPVITD 338 (502)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEECS--SEEEEEEECTTSCE-----------EEEEEECSEEEECCCEECCHHHHH
T ss_pred HHHHHHHHHHHHhcceeeecCceEEEEeC--CceEEEEEecCccc-----------ceeeeccCEEEEccCCcCCHHHHh
Confidence 56677777888999999999999988853 444 345556621 113699999999999876654433
No 164
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=93.51 E-value=0.21 Score=46.23 Aligned_cols=63 Identities=13% Similarity=0.042 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCe--EEEEecCCcccccCCCCCCCCCc--eeEecCEEEEcCCCCch
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNC--MNVYISESKNLRNWDGVSPLQPE--LTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~--~~V~t~~g~~~~~~~~~~~~~~~--~~i~a~~VV~aaG~~s~ 116 (287)
..+...+.+.+++.|++++.+++|++++..+++ +.|++.+...+ +. .++.+|.||+|+|...+
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g----------~~~g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRL----------PVMTMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSC----------CEEEEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCC----------cccceEEEcCEEEEeeccccC
Confidence 456677778888999999999999999876554 56777652110 11 37999999999997544
No 165
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=93.51 E-value=0.13 Score=48.12 Aligned_cols=58 Identities=10% Similarity=-0.050 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHCCcEEEcCceeEEEEEeC--------CeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 46 LMLSLVGEAENHGTTFSNNTSVIGGHLEG--------NCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 46 l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~--------~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
+..-|...|++.+..++++++|++++... +.|.|++.++.+ ++..+++|++||+|+|.
T Consensus 147 ~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~----------g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 147 FEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVET----------GEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTT----------CCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCC----------ceEEEEEeCEEEECcCC
Confidence 33434445566677788999999998743 248899877643 33567999999999994
No 166
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=93.50 E-value=0.18 Score=43.45 Aligned_cols=59 Identities=7% Similarity=0.099 Sum_probs=43.2
Q ss_pred ecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeC-CeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 41 VDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEG-NCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 41 vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~-~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
+.+..+...+.+++.+.+...+....+..+...+ +.+.|.+.+|. ++++|+||+|+|+.
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~---------------~~~a~~liiATGs~ 116 (304)
T 4fk1_A 57 IKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHT---------------KYLAERVLLATGMQ 116 (304)
T ss_dssp BCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCC---------------EEEEEEEEECCCCE
T ss_pred CCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCC---------------EEEeCEEEEccCCc
Confidence 5677888777777777765444445566665544 46788888883 89999999999974
No 167
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=93.32 E-value=0.24 Score=42.49 Aligned_cols=60 Identities=18% Similarity=0.116 Sum_probs=43.9
Q ss_pred HHHHHHH-CCcEEEcCceeEEEEEeCCeEEEEecC---CcccccCCCCCCCCCceeEecCEEEEcCCCCch-HHHHHh
Q 023079 50 LVGEAEN-HGTTFSNNTSVIGGHLEGNCMNVYISE---SKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP-ALAKRF 122 (287)
Q Consensus 50 l~~~a~~-~Gv~~~~~~~V~~i~~~~~~~~V~t~~---g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~-~l~~~~ 122 (287)
+.+.+.+ .|++++.+++|+++..+++...|++.+ | ++.++.+|.||+|+|...+ .+++.+
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g-------------~~~~~~~D~vv~a~G~~p~~~~~~~~ 259 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTG-------------EIKELNVNGVFIEIGFDPPTDFAKSN 259 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTC-------------CEEEEECSEEEECCCEECCHHHHHHT
T ss_pred HHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCC-------------ceEEEEcCEEEEEECCCCChhHHhhc
Confidence 3444444 499999999999998765444566654 4 1346999999999998877 666665
No 168
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=93.10 E-value=0.17 Score=47.05 Aligned_cols=56 Identities=13% Similarity=0.160 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeE-EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCM-NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
..+...+.+.+++.|++++++++|+++.. ++++ .|.+ +|. ++.+|.||+|+|...+
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~---------------~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DKN---------------EYDVDMVILAVGFRPN 292 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SSC---------------EEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CCc---------------EEECCEEEECCCCCcC
Confidence 45667777888899999999999999976 3444 3666 442 7999999999997544
No 169
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.85 E-value=0.14 Score=47.25 Aligned_cols=58 Identities=19% Similarity=0.221 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
..+...+.+.++++|++++.+++|++++. + .+.|++.+|. +.++.+|.||+|+|...+
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~-~v~v~~~~G~-------------~~~i~~D~vv~a~G~~p~ 269 (458)
T 1lvl_A 212 SELTAPVAESLKKLGIALHLGHSVEGYEN-G-CLLANDGKGG-------------QLRLEADRVLVAVGRRPR 269 (458)
T ss_dssp HHHHHHHHHHHHHHTCEEETTCEEEEEET-T-EEEEECSSSC-------------CCEECCSCEEECCCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEe-C-CEEEEECCCc-------------eEEEECCEEEECcCCCcC
Confidence 45666777788889999999999999976 4 3666643441 127999999999997654
No 170
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=92.80 E-value=0.22 Score=43.10 Aligned_cols=59 Identities=19% Similarity=0.208 Sum_probs=40.6
Q ss_pred HHHHHHHHHC-CcEEEcCceeEEEEEeCCeEE-EEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 48 LSLVGEAENH-GTTFSNNTSVIGGHLEGNCMN-VYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 48 ~~l~~~a~~~-Gv~~~~~~~V~~i~~~~~~~~-V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
..+.+.+.+. |++|+.+++|.++..+++++. |++.+..+ ++..++.+|.||+|+|....
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~----------g~~~~i~~D~vi~a~G~~p~ 272 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKK----------NEETDLPVSGLFYAIGHTPA 272 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTT----------TEEEEEECSEEEECSCEEEC
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCC----------CceEEEEeCEEEEEeCCCCC
Confidence 3445555555 999999999999988766443 65544110 01237999999999997544
No 171
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.77 E-value=0.22 Score=42.59 Aligned_cols=58 Identities=17% Similarity=0.222 Sum_probs=46.6
Q ss_pred eecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeC--CeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 40 IVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEG--NCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~--~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
.+.+..+...+.+.+++.|++++.+ +|+++ .++ +.|.|....+ . ++++|+||+|+|..
T Consensus 58 ~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~--------------~-~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 58 VMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGG--------------K-TELAKAVIVCTGSA 117 (315)
T ss_dssp CBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTS--------------C-EEEEEEEEECCCEE
T ss_pred CCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecC--------------C-EEEeCEEEEeeCCC
Confidence 5678889999999999999999987 89999 776 6788533333 1 69999999999973
No 172
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=92.65 E-value=0.28 Score=42.30 Aligned_cols=55 Identities=11% Similarity=-0.017 Sum_probs=39.9
Q ss_pred HHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 51 VGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 51 ~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
.+.+++.|++++.+++|.++..+++...|++.++.. ++..++.+|.||+|+|.-.
T Consensus 196 ~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~----------g~~~~~~~D~vv~a~G~~p 250 (332)
T 3lzw_A 196 VENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKG----------DRKEILEIDDLIVNYGFVS 250 (332)
T ss_dssp HHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTS----------CCEEEEECSEEEECCCEEC
T ss_pred HHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCC----------CceEEEECCEEEEeeccCC
Confidence 345678999999999999998766544565554211 1134799999999999755
No 173
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=92.63 E-value=0.38 Score=42.46 Aligned_cols=32 Identities=9% Similarity=0.035 Sum_probs=28.0
Q ss_pred cHHHHHHHHHHHHHHC-CcEEEcCceeEEEEEe
Q 023079 42 DSHSLMLSLVGEAENH-GTTFSNNTSVIGGHLE 73 (287)
Q Consensus 42 dp~~l~~~l~~~a~~~-Gv~~~~~~~V~~i~~~ 73 (287)
+...+...|.+.+.+. |++++++++|+++..+
T Consensus 144 ~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~ 176 (326)
T 2gjc_A 144 HAALFISTVLSKVLQLPNVKLFNATCVEDLVTR 176 (326)
T ss_dssp CHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEC
T ss_pred chHHHHHHHHHHHHHhcCcEEEecceeeeeeec
Confidence 5678889999888885 9999999999999876
No 174
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=92.56 E-value=0.23 Score=43.77 Aligned_cols=64 Identities=13% Similarity=0.059 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeE-EEEe--cCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH-HHH
Q 023079 45 SLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCM-NVYI--SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA-LAK 120 (287)
Q Consensus 45 ~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~-~V~t--~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~-l~~ 120 (287)
.+...+.+..++.|++++.+++|+++..+++++ .|++ .+|. +..+.+|.||+|+|...+. +++
T Consensus 203 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~-------------~~~i~~D~vi~a~G~~p~~~~l~ 269 (360)
T 3ab1_A 203 KTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGS-------------KWTVEADRLLILIGFKSNLGPLA 269 (360)
T ss_dssp HHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCC-------------EEEEECSEEEECCCBCCSCGGGG
T ss_pred HHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCC-------------eEEEeCCEEEECCCCCCCHHHHH
Confidence 455666677788899999999999998876654 3444 3551 2379999999999976542 444
Q ss_pred H
Q 023079 121 R 121 (287)
Q Consensus 121 ~ 121 (287)
.
T Consensus 270 ~ 270 (360)
T 3ab1_A 270 R 270 (360)
T ss_dssp G
T ss_pred h
Confidence 3
No 175
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.54 E-value=0.31 Score=42.84 Aligned_cols=61 Identities=8% Similarity=0.068 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHCC-cEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeE-ecCEEEEcCCCCchH-HHH
Q 023079 45 SLMLSLVGEAENHG-TTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTL-IPKLVVNSAGLSAPA-LAK 120 (287)
Q Consensus 45 ~l~~~l~~~a~~~G-v~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i-~a~~VV~aaG~~s~~-l~~ 120 (287)
.+...+.+..++.| ++++.+++|.+++.+++.+.|++.+|. ++ .+|.||+|+|.-.+. ++.
T Consensus 215 ~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~---------------~~~~~d~vi~a~G~~~~~~~~~ 278 (369)
T 3d1c_A 215 YTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQ---------------SVHTPHEPILATGFDATKNPIV 278 (369)
T ss_dssp HHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSC---------------CEEESSCCEECCCBCGGGSHHH
T ss_pred HHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCe---------------EeccCCceEEeeccCCccchhh
Confidence 44455666667787 999999999999877777788888872 45 469999999987665 443
No 176
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=92.34 E-value=0.089 Score=48.14 Aligned_cols=60 Identities=15% Similarity=0.219 Sum_probs=46.3
Q ss_pred eeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 39 GIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 39 g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
|..++..+...+.+.+++.|++++. .+|++++.+++ .|++++|. ++.+|+||+|+|....
T Consensus 54 g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~id~~~~--~V~~~~g~---------------~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 54 GWKERDDIAFPIRHYVERKGIHFIA-QSAEQIDAEAQ--NITLADGN---------------TVHYDYLMIATGPKLA 113 (437)
T ss_dssp TSSCHHHHEEECHHHHHTTTCEEEC-SCEEEEETTTT--EEEETTSC---------------EEECSEEEECCCCEEC
T ss_pred CccCHHHHHHHHHHHHHHCCCEEEE-eEEEEEEcCCC--EEEECCCC---------------EEECCEEEECCCCCcC
Confidence 3456667777777778889999985 68999977655 57777772 6999999999998654
No 177
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=92.23 E-value=0.37 Score=41.58 Aligned_cols=55 Identities=18% Similarity=0.122 Sum_probs=39.9
Q ss_pred HHHHHHHHCCcEEEcCceeEEEEEeCCeE-EEEec---CCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 49 SLVGEAENHGTTFSNNTSVIGGHLEGNCM-NVYIS---ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 49 ~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~-~V~t~---~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
.+.+.+.+.|++++.+++|+++..+++++ .|+.. +| ++.++.+|.||+|+|.-.+
T Consensus 195 ~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g-------------~~~~i~~D~vi~a~G~~p~ 253 (319)
T 3cty_A 195 AYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTG-------------EEKLIETDGVFIYVGLIPQ 253 (319)
T ss_dssp HHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTC-------------CEEEECCSEEEECCCEEEC
T ss_pred HHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCC-------------ceEEEecCEEEEeeCCccC
Confidence 34556678899999999999998765533 34443 44 1236999999999997654
No 178
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=92.20 E-value=0.38 Score=41.15 Aligned_cols=56 Identities=9% Similarity=0.020 Sum_probs=39.0
Q ss_pred HHHHHHH-CCcEEEcCceeEEEEEeCCeE-EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 50 LVGEAEN-HGTTFSNNTSVIGGHLEGNCM-NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 50 l~~~a~~-~Gv~~~~~~~V~~i~~~~~~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
+.+.+++ .|++++.+++|+++..+++++ .|++.++.+ +++.++.+|.||+|+|.-.
T Consensus 185 ~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~----------g~~~~i~~D~vi~a~G~~p 242 (310)
T 1fl2_A 185 LQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVS----------GDIHNIELAGIFVQIGLLP 242 (310)
T ss_dssp HHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTT----------CCEEEEECSEEEECSCEEE
T ss_pred HHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCC----------CcEEEEEcCEEEEeeCCcc
Confidence 4445566 699999999999998765554 355543211 1234799999999999654
No 179
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=92.03 E-value=0.098 Score=48.46 Aligned_cols=61 Identities=15% Similarity=0.212 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHh
Q 023079 43 SHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRF 122 (287)
Q Consensus 43 p~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~ 122 (287)
...++.+|++.+.+.|++++.+++|++|..+++. |++.+|. +++||+||.+.-+ ..+.+.+
T Consensus 221 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~---------------~~~ad~vI~t~P~--~~l~~~l 281 (513)
T 4gde_A 221 TGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGT---------------TIGYKKLVSTMAV--DFLAEAM 281 (513)
T ss_dssp HHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSC---------------EEEEEEEEECSCH--HHHHHHT
T ss_pred HHHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCC---------------EEECCEEEECCCH--HHHHHhc
Confidence 3678888988888899999999999999887665 4567773 8999999988764 4555555
No 180
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=91.88 E-value=0.085 Score=49.86 Aligned_cols=60 Identities=17% Similarity=0.091 Sum_probs=42.5
Q ss_pred HHHHHHHCCcEEEcCceeEEEEEeCC---eE-EEEec--CCcccccCCCCCCCCCceeE---ecCEEEEcCCCC-chHHH
Q 023079 50 LVGEAENHGTTFSNNTSVIGGHLEGN---CM-NVYIS--ESKNLRNWDGVSPLQPELTL---IPKLVVNSAGLS-APALA 119 (287)
Q Consensus 50 l~~~a~~~Gv~~~~~~~V~~i~~~~~---~~-~V~t~--~g~~~~~~~~~~~~~~~~~i---~a~~VV~aaG~~-s~~l~ 119 (287)
|...+++.|+++++++.|+.|..+++ ++ .|+.. +| +.+++ .++.||+|||++ +++|+
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g-------------~~~~~~v~a~k~VILaaGa~~sp~lL 266 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNG-------------TPHQAFVRSKGEVIVSAGTIGTPQLL 266 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTS-------------CEEEEEEEEEEEEEECCHHHHHHHHH
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCC-------------ceEEEEeccCCEEEEcCcccCCHHHH
Confidence 44445677999999999999988753 43 36553 34 12345 579999999997 67776
Q ss_pred HHh
Q 023079 120 KRF 122 (287)
Q Consensus 120 ~~~ 122 (287)
...
T Consensus 267 ~~S 269 (536)
T 1ju2_A 267 LLS 269 (536)
T ss_dssp HHT
T ss_pred HHc
Confidence 655
No 181
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=91.71 E-value=0.44 Score=44.32 Aligned_cols=59 Identities=14% Similarity=0.084 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEec--CCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYIS--ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~--~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
..+...+.+.+++. ++++.+++|.+++.+++++.|++. +|. +.++.+|.||+|+|...+
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~-------------~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQ-------------KTTESFQYVLAATGRKAN 275 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCC-------------EEEEEESEEEECSCCEES
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCc-------------eEEEECCEEEEeeCCccC
Confidence 45666676777777 999999999999888777777664 441 237999999999997644
No 182
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=91.70 E-value=0.46 Score=40.68 Aligned_cols=58 Identities=21% Similarity=0.391 Sum_probs=45.9
Q ss_pred ecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 41 VDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 41 vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
+++..++..+.+.+++.+.++... .|.......+...+.+.++. ++++|+||+|+|+.
T Consensus 63 i~~~~l~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~---------------~~~~~~liiATG~~ 120 (314)
T 4a5l_A 63 IDGNELMMNMRTQSEKYGTTIITE-TIDHVDFSTQPFKLFTEEGK---------------EVLTKSVIIATGAT 120 (314)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEECC-CEEEEECSSSSEEEEETTCC---------------EEEEEEEEECCCEE
T ss_pred CCHHHHHHHHHHHHhhcCcEEEEe-EEEEeecCCCceEEEECCCe---------------EEEEeEEEEccccc
Confidence 677889998989999999998865 46566655566667777663 89999999999974
No 183
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=91.66 E-value=0.46 Score=40.53 Aligned_cols=49 Identities=14% Similarity=0.033 Sum_probs=37.1
Q ss_pred HHCCcEEEcCceeEEEEEeCCeEE-EEec--CCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 55 ENHGTTFSNNTSVIGGHLEGNCMN-VYIS--ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 55 ~~~Gv~~~~~~~V~~i~~~~~~~~-V~t~--~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
++.|++|+.+++|.++..+++++. |+.. +|. +.++.+|.||+|+|.-.+
T Consensus 194 ~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~-------------~~~~~~D~vv~a~G~~p~ 245 (315)
T 3r9u_A 194 KNEKIELITSASVDEVYGDKMGVAGVKVKLKDGS-------------IRDLNVPGIFTFVGLNVR 245 (315)
T ss_dssp HCTTEEEECSCEEEEEEEETTEEEEEEEECTTSC-------------EEEECCSCEEECSCEEEC
T ss_pred hcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCC-------------eEEeecCeEEEEEcCCCC
Confidence 577999999999999988775542 4443 551 347999999999997543
No 184
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=91.54 E-value=0.17 Score=46.47 Aligned_cols=51 Identities=14% Similarity=0.059 Sum_probs=39.7
Q ss_pred HHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 50 LVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 50 l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
+.+.+++.|++++.+++|+++..+++.+.++...+ ..++++|++|+|+|..
T Consensus 64 ~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~~~~--------------~~~~~~d~lviAtG~~ 114 (452)
T 3oc4_A 64 TEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEE--------------QQWYSYDKLILATGAS 114 (452)
T ss_dssp CHHHHHHTTEEEECSCEEEEEETTTTEEEEEETTE--------------EEEEECSEEEECCCCC
T ss_pred CHHHHHHCCCEEEECCEEEEEECCCCEEEEEecCc--------------eEEEEcCEEEECCCcc
Confidence 44556778999999999999988877887752222 1279999999999984
No 185
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=91.53 E-value=0.39 Score=44.49 Aligned_cols=62 Identities=18% Similarity=0.051 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeC-CeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEG-NCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~-~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
..+...+.+.++++|++++.++.|.++...+ +.+.|+..+..++ ++.++.+|.||+|+|.-.
T Consensus 225 ~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g----------~~~~~~~D~vi~a~G~~p 287 (488)
T 3dgz_A 225 QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASG----------KEDTGTFDTVLWAIGRVP 287 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTT----------EEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCC----------eeEEEECCEEEEcccCCc
Confidence 4566777788889999999999999998743 4566665442111 123589999999999753
No 186
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=91.01 E-value=0.29 Score=45.21 Aligned_cols=50 Identities=14% Similarity=0.086 Sum_probs=36.8
Q ss_pred HHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCcee------EecCEEEEcCCCCc
Q 023079 50 LVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELT------LIPKLVVNSAGLSA 115 (287)
Q Consensus 50 l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~------i~a~~VV~aaG~~s 115 (287)
+...+++.|++++.++.+.. +.+.+.|.+.+|. ..+ +++|+||+|+|++.
T Consensus 102 ~~~~~~~~gv~~~~g~~~~~---~~~~v~V~~~~G~-------------~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 102 IELLFKKNKVTYYKGNGSFE---DETKIRVTPVDGL-------------EGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp HHHHHHHTTCEEEESEEEES---SSSEEEEECCTTC-------------TTCCSSCEEEEEEEEEECCCEEE
T ss_pred HHHHHHhCCCEEEEEEEEEc---cCCeEEEEecCCC-------------cccccccceEEeCEEEECcCCCC
Confidence 44556778999999887642 4457888876661 014 99999999999876
No 187
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=90.78 E-value=0.31 Score=47.19 Aligned_cols=48 Identities=15% Similarity=0.106 Sum_probs=36.6
Q ss_pred CcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 58 GTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 58 Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
+.+++.+++|++|...++++.|++.++.+ .+...+++||+||+|....
T Consensus 410 ~l~I~l~~~V~~I~~~~~~v~V~~~~~~~---------~~~~~~~~Ad~VI~tvP~~ 457 (662)
T 2z3y_A 410 GLDIKLNTAVRQVRYTASGCEVIAVNTRS---------TSQTFIYKCDAVLCTLPLG 457 (662)
T ss_dssp TCEEETTEEEEEEEEETTEEEEEEEESSC---------TTCEEEEEESEEEECCCHH
T ss_pred cCceecCCeEEEEEECCCcEEEEEeeccc---------CCCCeEEEeCEEEECCCHH
Confidence 67999999999999998899988765100 0011379999999999853
No 188
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.76 E-value=0.55 Score=43.00 Aligned_cols=50 Identities=14% Similarity=0.132 Sum_probs=36.9
Q ss_pred HHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 49 SLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 49 ~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
.+...++++|++++.++.+. + +.+.+.|++.+|. .++++|+||+|+|...
T Consensus 96 ~~~~~~~~~gv~~~~g~~~~-i--d~~~v~V~~~~G~--------------~~i~~d~lViATGs~p 145 (455)
T 1ebd_A 96 GVEGLLKGNKVEIVKGEAYF-V--DANTVRVVNGDSA--------------QTYTFKNAIIATGSRP 145 (455)
T ss_dssp HHHHHHHTTTCEEEESEEEE-E--ETTEEEEEETTEE--------------EEEECSEEEECCCEEE
T ss_pred HHHHHHHhCCCEEEEEEEEE-c--cCCeEEEEeCCCc--------------EEEEeCEEEEecCCCC
Confidence 34456677899999887653 3 4567888887661 2799999999999753
No 189
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=90.68 E-value=0.32 Score=45.05 Aligned_cols=61 Identities=15% Similarity=0.202 Sum_probs=36.4
Q ss_pred HHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 50 LVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 50 l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
+...++++|++++.++.+. .+++.+.|.+.+|..+. .....+++.++++|+||+|+|.+..
T Consensus 101 ~~~~~~~~gv~~~~g~~~~---~~~~~v~v~~~~g~~~~---~~~~~g~~~~i~ad~lViAtGs~p~ 161 (482)
T 1ojt_A 101 LAGMAKSRKVDVIQGDGQF---LDPHHLEVSLTAGDAYE---QAAPTGEKKIVAFKNCIIAAGSRVT 161 (482)
T ss_dssp HHHHHHHTTCEEEEEEEEE---EETTEEEEEEEEEEETT---EEEEEEEEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHhCCcEEEeeEEEE---ccCCEEEEEecCCcccc---cccccCcceEEEcCEEEECCCCCCC
Confidence 4455677899999887654 34567777765440000 0000000137999999999998743
No 190
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=90.47 E-value=0.16 Score=49.45 Aligned_cols=59 Identities=12% Similarity=-0.036 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
..+...+.+.++++|++|+++++|+++.. ++..++...... ..++.||.||+|+|...+
T Consensus 567 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~--~~~~v~~~~~~~------------~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 567 TFEVNRIQRRLIENGVARVTDHAVVAVGA--GGVTVRDTYASI------------ERELECDAVVMVTARLPR 625 (690)
T ss_dssp GTCHHHHHHHHHHTTCEEEESEEEEEEET--TEEEEEETTTCC------------EEEEECSEEEEESCEEEC
T ss_pred chhHHHHHHHHHHCCCEEEcCcEEEEEEC--CeEEEEEccCCe------------EEEEECCEEEECCCCCCC
Confidence 34456677788899999999999998864 444444321100 137999999999998654
No 191
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=90.47 E-value=0.15 Score=45.84 Aligned_cols=54 Identities=15% Similarity=0.046 Sum_probs=45.9
Q ss_pred HHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHh
Q 023079 54 AENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRF 122 (287)
Q Consensus 54 a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~ 122 (287)
.++.|++++.++++..++.+++...|++++|. ++.+|.|++|+|.-.+.+++..
T Consensus 212 l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~---------------~i~~D~vi~~~g~~~~~~~~~~ 265 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTDTEAMTVETSFGE---------------TFKAAVINLIPPQRAGKIAQSA 265 (401)
T ss_dssp STTCSEEEECTTTTCEEEEETTTTEEEETTSC---------------EEECSEEEECCCEEECHHHHHT
T ss_pred HHhcCcEEEeCceEEEEEecccceEEEcCCCc---------------EEEeeEEEEecCcCCchhHhhc
Confidence 35679999999999999887777788998883 7999999999998888887766
No 192
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=90.47 E-value=0.4 Score=43.74 Aligned_cols=47 Identities=15% Similarity=0.134 Sum_probs=37.4
Q ss_pred HHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 52 GEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 52 ~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
+.++++|++++.+++|+.+..++. .|++.+|. ++++|+||+|+|...
T Consensus 68 ~~~~~~gv~~~~~~~v~~i~~~~~--~v~~~~g~---------------~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 68 DAYAAQNIQLLGGTQVTAINRDRQ--QVILSDGR---------------ALDYDRLVLATGGRP 114 (431)
T ss_dssp HHHHHTTEEEECSCCEEEEETTTT--EEEETTSC---------------EEECSEEEECCCEEE
T ss_pred HHHHhCCCEEEeCCEEEEEECCCC--EEEECCCC---------------EEECCEEEEcCCCCc
Confidence 445678999999999999987554 46666662 799999999999854
No 193
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=90.43 E-value=0.46 Score=43.43 Aligned_cols=61 Identities=16% Similarity=0.180 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeE-EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch-HHHHH
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCM-NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP-ALAKR 121 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~-~l~~~ 121 (287)
..+...+.+.++++ ++++.+++|.++..++ ++ .|.++.+ ++.+|.||+|+|...+ .+++.
T Consensus 190 ~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~~g~----------------~i~~D~Vv~a~G~~p~~~l~~~ 251 (449)
T 3kd9_A 190 KEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKVVTDAG----------------EYKAELVILATGIKPNIELAKQ 251 (449)
T ss_dssp HHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEEEETTE----------------EEECSEEEECSCEEECCHHHHH
T ss_pred HHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEEEeCCC----------------EEECCEEEEeeCCccCHHHHHh
Confidence 45666777777788 9999999999997654 44 3444333 7999999999999854 56666
Q ss_pred h
Q 023079 122 F 122 (287)
Q Consensus 122 ~ 122 (287)
+
T Consensus 252 ~ 252 (449)
T 3kd9_A 252 L 252 (449)
T ss_dssp T
T ss_pred C
Confidence 6
No 194
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=90.41 E-value=0.042 Score=50.34 Aligned_cols=44 Identities=16% Similarity=0.114 Sum_probs=35.0
Q ss_pred HHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 53 EAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 53 ~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
.++++|++|+.+ +|++|+.+++. |++++|. ++..|++|+|+|+.
T Consensus 65 ~~~~~gv~~i~~-~v~~Id~~~~~--V~~~~g~---------------~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 65 LLPKFNIEFINE-KAESIDPDANT--VTTQSGK---------------KIEYDYLVIATGPK 108 (430)
T ss_dssp TGGGGTEEEECS-CEEEEETTTTE--EEETTCC---------------EEECSEEEECCCCE
T ss_pred HHHHCCcEEEEe-EEEEEECCCCE--EEECCCC---------------EEECCEEEEeCCCC
Confidence 345679999865 79999876654 6788873 79999999999974
No 195
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=90.40 E-value=0.38 Score=44.19 Aligned_cols=51 Identities=10% Similarity=0.036 Sum_probs=37.3
Q ss_pred HHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 49 SLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 49 ~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
.+.+.+++.|++++.++.+. .+.+.+.|.+.+|. ..++++|+||+|+|...
T Consensus 96 ~l~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~-------------~~~~~~d~lViAtG~~~ 146 (464)
T 2a8x_A 96 GVHFLMKKNKITEIHGYGTF---ADANTLLVDLNDGG-------------TESVTFDNAIIATGSST 146 (464)
T ss_dssp HHHHHHHHTTCEEECEEEEE---SSSSEEEEEETTSC-------------CEEEEEEEEEECCCEEE
T ss_pred HHHHHHHhCCCEEEEeEEEE---ecCCeEEEEeCCCc-------------eEEEEcCEEEECCCCCC
Confidence 34556677899999887653 34567888887661 12799999999999865
No 196
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.28 E-value=0.1 Score=46.76 Aligned_cols=47 Identities=11% Similarity=-0.057 Sum_probs=35.3
Q ss_pred HHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 50 LVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 50 l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
+.+.+++.|++++.+++|+.+..+. +.|+ .+|. ++++|++|+|+|+.
T Consensus 66 ~~~~~~~~~v~~~~g~~v~~id~~~--~~V~-~~g~---------------~~~~d~lViATGs~ 112 (367)
T 1xhc_A 66 SLDWYRKRGIEIRLAEEAKLIDRGR--KVVI-TEKG---------------EVPYDTLVLATGAR 112 (367)
T ss_dssp CHHHHHHHTEEEECSCCEEEEETTT--TEEE-ESSC---------------EEECSEEEECCCEE
T ss_pred CHHHHHhCCcEEEECCEEEEEECCC--CEEE-ECCc---------------EEECCEEEECCCCC
Confidence 3444567899999999998887643 4455 4552 79999999999963
No 197
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=90.27 E-value=0.61 Score=44.55 Aligned_cols=55 Identities=15% Similarity=0.070 Sum_probs=40.3
Q ss_pred HHCCcEEEcCceeEEEEEe----CCeE-EEEec--CCcccccCCCCCCCCCceeEecC-EEEEcCCCC-chHHHHHh
Q 023079 55 ENHGTTFSNNTSVIGGHLE----GNCM-NVYIS--ESKNLRNWDGVSPLQPELTLIPK-LVVNSAGLS-APALAKRF 122 (287)
Q Consensus 55 ~~~Gv~~~~~~~V~~i~~~----~~~~-~V~t~--~g~~~~~~~~~~~~~~~~~i~a~-~VV~aaG~~-s~~l~~~~ 122 (287)
.+.+.++++++.|+.|..+ ++++ .|+.. +| ++++++|+ -||+|||+. +++|+...
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G-------------~~~~v~A~kEVILsAGa~~SPqLL~lS 301 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKG-------------NTHNVYAKHEVLLAAGSAVSPTILEYS 301 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTT-------------CEEEEEEEEEEEECSCTTTHHHHHHHT
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCC-------------cEEEEEECCEEEEeCCccCCHHHHHHc
Confidence 4568999999999999887 4444 36543 34 34678997 599999987 66676555
No 198
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.26 E-value=0.33 Score=43.29 Aligned_cols=59 Identities=19% Similarity=0.255 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH-HHHHh
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA-LAKRF 122 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~-l~~~~ 122 (287)
..+...+.+.++++|++++++++|++++ .+ .|++++| ++.+|.||+|+|...+. +++.+
T Consensus 183 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~--~v~~~~g----------------~i~~D~vi~a~G~~p~~~ll~~~ 242 (367)
T 1xhc_A 183 EELSNMIKDMLEETGVKFFLNSELLEAN--EE--GVLTNSG----------------FIEGKVKICAIGIVPNVDLARRS 242 (367)
T ss_dssp HHHHHHHHHHHHHTTEEEECSCCEEEEC--SS--EEEETTE----------------EEECSCEEEECCEEECCHHHHHT
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEE--ee--EEEECCC----------------EEEcCEEEECcCCCcCHHHHHhC
Confidence 3566677778889999999999999886 23 3667777 59999999999987663 66665
No 199
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.12 E-value=0.48 Score=43.55 Aligned_cols=50 Identities=12% Similarity=0.165 Sum_probs=36.4
Q ss_pred HHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 50 LVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 50 l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
+...++++|++++.++.+. .+.+.+.|++.+|. ..++++|+||+|+|...
T Consensus 102 ~~~~~~~~gv~~~~g~~~~---~~~~~~~v~~~~G~-------------~~~i~~d~lIiAtGs~p 151 (470)
T 1dxl_A 102 IEGLFKKNKVTYVKGYGKF---VSPSEISVDTIEGE-------------NTVVKGKHIIIATGSDV 151 (470)
T ss_dssp HHHHHHHHTCEEEESCEEE---EETTEEEECCSSSC-------------CEEEECSEEEECCCEEE
T ss_pred HHHHHHhCCCEEEEeEEEE---ecCCEEEEEeCCCc-------------eEEEEcCEEEECCCCCC
Confidence 3445667799999988663 34567888776661 12799999999999754
No 200
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=89.95 E-value=0.18 Score=46.32 Aligned_cols=60 Identities=18% Similarity=0.106 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 43 SHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 43 p~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
+..+...+.+.+++.|++++.+++|..+..+++.+.+.+.++. +..++++|++|+|+|..
T Consensus 57 ~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g------------~~~~~~~d~lviAtGs~ 116 (452)
T 2cdu_A 57 PRGLFYSSPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITN------------EEKTEAYDKLIMTTGSK 116 (452)
T ss_dssp GGGGBSCCHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTC------------CEEEEECSEEEECCCEE
T ss_pred HHHhhhcCHHHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCC------------ceEEEECCEEEEccCCC
Confidence 3333333445566789999889999999877777777653210 01279999999999964
No 201
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=89.76 E-value=0.46 Score=40.13 Aligned_cols=57 Identities=7% Similarity=0.048 Sum_probs=42.2
Q ss_pred HHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc-hHHHHHh
Q 023079 47 MLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA-PALAKRF 122 (287)
Q Consensus 47 ~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s-~~l~~~~ 122 (287)
...+.+.+++.|++++. ++|.++..++ .|++.+|. ++.+|.||+|+|... ..+++.+
T Consensus 177 ~~~~~~~l~~~gv~i~~-~~v~~i~~~~---~v~~~~g~---------------~~~~D~vi~a~G~~p~~~~~~~~ 234 (297)
T 3fbs_A 177 DADQHALLAARGVRVET-TRIREIAGHA---DVVLADGR---------------SIALAGLFTQPKLRITVDWIEKL 234 (297)
T ss_dssp CHHHHHHHHHTTCEEEC-SCEEEEETTE---EEEETTSC---------------EEEESEEEECCEEECCCSCHHHH
T ss_pred CHHHHHHHHHCCcEEEc-ceeeeeecCC---eEEeCCCC---------------EEEEEEEEEccCcccCchhHHhc
Confidence 34566677889999996 8898886432 67777773 799999999999763 2455555
No 202
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=89.60 E-value=1.2 Score=38.01 Aligned_cols=54 Identities=13% Similarity=0.054 Sum_probs=38.7
Q ss_pred HHHHHH-HCCcEEEcCceeEEEEEeCCeE-EEEec---CCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 50 LVGEAE-NHGTTFSNNTSVIGGHLEGNCM-NVYIS---ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 50 l~~~a~-~~Gv~~~~~~~V~~i~~~~~~~-~V~t~---~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
+.+.+. +.|++++.+++|.++..+++++ .|++. +| ++.++.+|.||+|+|.-.+
T Consensus 184 ~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g-------------~~~~i~~D~vi~a~G~~p~ 242 (311)
T 2q0l_A 184 TLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATN-------------EKRELVVPGFFIFVGYDVN 242 (311)
T ss_dssp HHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTC-------------CEEEEECSEEEECSCEEEC
T ss_pred HHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCC-------------ceEEEecCEEEEEecCccC
Confidence 444454 4699999999999998775554 35544 44 1246999999999997543
No 203
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=89.48 E-value=0.48 Score=43.29 Aligned_cols=51 Identities=16% Similarity=0.070 Sum_probs=38.5
Q ss_pred HHHHHHCCcEEEcCceeEEEEEeCCeEEEEe-cCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 51 VGEAENHGTTFSNNTSVIGGHLEGNCMNVYI-SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 51 ~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t-~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
.+.+++.|++++.+++|+++..+++.+.+.+ .+|. ..++++|++|+|+|..
T Consensus 63 ~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~-------------~~~~~~d~lviAtG~~ 114 (447)
T 1nhp_A 63 GEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGE-------------ERVENYDKLIISPGAV 114 (447)
T ss_dssp HHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCC-------------EEEEECSEEEECCCEE
T ss_pred HHHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCc-------------eEEEeCCEEEEcCCCC
Confidence 3445678999988999999987777777765 3341 1258999999999975
No 204
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=89.44 E-value=0.84 Score=40.47 Aligned_cols=50 Identities=10% Similarity=0.197 Sum_probs=40.2
Q ss_pred CCcEEEcCceeEEEEEeC-CeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHh
Q 023079 57 HGTTFSNNTSVIGGHLEG-NCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRF 122 (287)
Q Consensus 57 ~Gv~~~~~~~V~~i~~~~-~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~ 122 (287)
.+.+++++++|++++..+ +.+.|++++|. +++||.||-|-|.+|.- -+.+
T Consensus 122 ~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~---------------~~~adlvVgADG~~S~v-R~~l 172 (412)
T 4hb9_A 122 LANTIQWNKTFVRYEHIENGGIKIFFADGS---------------HENVDVLVGADGSNSKV-RKQY 172 (412)
T ss_dssp CTTTEECSCCEEEEEECTTSCEEEEETTSC---------------EEEESEEEECCCTTCHH-HHHH
T ss_pred ccceEEEEEEEEeeeEcCCCeEEEEECCCC---------------EEEeeEEEECCCCCcch-HHHh
Confidence 366789999999998754 46889999983 79999999999999853 3444
No 205
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=89.30 E-value=0.35 Score=44.86 Aligned_cols=50 Identities=12% Similarity=0.139 Sum_probs=37.8
Q ss_pred HHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 51 VGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 51 ~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
.+.+++.|++++.+++|+.+..+++.+.|.+ ++. ..++++|+||+|+|..
T Consensus 99 ~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~-~g~-------------~~~~~~d~lviAtG~~ 148 (490)
T 2bc0_A 99 KEELESLGAKVYMESPVQSIDYDAKTVTALV-DGK-------------NHVETYDKLIFATGSQ 148 (490)
T ss_dssp HHHHHHTTCEEETTCCEEEEETTTTEEEEEE-TTE-------------EEEEECSEEEECCCEE
T ss_pred HHHHHhCCCEEEeCCEEEEEECCCCEEEEEe-CCc-------------EEEEECCEEEECCCCC
Confidence 3445678999999999999987777777653 221 1279999999999964
No 206
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=89.19 E-value=1.2 Score=38.28 Aligned_cols=54 Identities=15% Similarity=-0.044 Sum_probs=37.6
Q ss_pred HHHHHHH-CCcEEEcCceeEEEEEeCCeEEEEec---CCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 50 LVGEAEN-HGTTFSNNTSVIGGHLEGNCMNVYIS---ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 50 l~~~a~~-~Gv~~~~~~~V~~i~~~~~~~~V~t~---~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
+.+.+.+ .|++|+.+++|+++..++....|+.. +| ++.++.+|.||+|+|.-.+
T Consensus 193 ~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g-------------~~~~i~~D~vi~a~G~~p~ 250 (325)
T 2q7v_A 193 AQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTG-------------EVSELATDGVFIFIGHVPN 250 (325)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTC-------------CEEEEECSEEEECSCEEES
T ss_pred HHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCC-------------cEEEEEcCEEEEccCCCCC
Confidence 3444544 59999999999999875432245543 44 1237999999999997554
No 207
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=88.80 E-value=1 Score=40.99 Aligned_cols=60 Identities=7% Similarity=-0.027 Sum_probs=45.3
Q ss_pred HHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHHh
Q 023079 48 LSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKRF 122 (287)
Q Consensus 48 ~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~~ 122 (287)
..+.+..+++|+++++++.|++++ ++++.++..+|. ..++.+|.||.|+|.-.+.+....
T Consensus 204 ~~l~~~l~~~GV~~~~~~~v~~v~--~~~~~~~~~~g~-------------~~~i~~d~vi~~~G~~~~~~~~~~ 263 (430)
T 3hyw_A 204 RLVEDLFAERNIDWIANVAVKAIE--PDKVIYEDLNGN-------------THEVPAKFTMFMPSFQGPEVVASA 263 (430)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEC--SSEEEEECTTSC-------------EEEEECSEEEEECEEECCHHHHTT
T ss_pred HHHHHHHHhCCeEEEeCceEEEEe--CCceEEEeeCCC-------------ceEeecceEEEeccCCCchHHHhc
Confidence 445556788899999999998874 456666665552 237999999999998887776655
No 208
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=88.65 E-value=0.81 Score=43.04 Aligned_cols=48 Identities=10% Similarity=0.047 Sum_probs=37.6
Q ss_pred HHHCCcEEEcCceeEEEEEeCCeEEEEec-CCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 54 AENHGTTFSNNTSVIGGHLEGNCMNVYIS-ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 54 a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~-~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
+++.|++++.+++|+++..+++.+.+... +| ...++++|+||+|+|+.
T Consensus 68 ~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g-------------~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 68 KARFNVEVRVKHEVVAIDRAAKLVTVRRLLDG-------------SEYQESYDTLLLSPGAA 116 (565)
T ss_dssp HHHHCCEEETTEEEEEEETTTTEEEEEETTTC-------------CEEEEECSEEEECCCEE
T ss_pred HHhcCcEEEECCEEEEEECCCCEEEEEecCCC-------------CeEEEECCEEEECCCCC
Confidence 45579999999999999888777777652 23 12379999999999973
No 209
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=88.48 E-value=0.42 Score=43.69 Aligned_cols=57 Identities=19% Similarity=0.120 Sum_probs=36.1
Q ss_pred cHHHHHHHHHHHH-HHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 42 DSHSLMLSLVGEA-ENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 42 dp~~l~~~l~~~a-~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
++..+.....+.. ++.|++++.+++|+++.. +.+.|.+.++ ..++++|+||+|+|..
T Consensus 56 ~~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~--~~~~v~~~~g--------------~~~~~~d~lviAtG~~ 113 (449)
T 3kd9_A 56 TPDKLMYYPPEVFIKKRGIDLHLNAEVIEVDT--GYVRVRENGG--------------EKSYEWDYLVFANGAS 113 (449)
T ss_dssp ----------CTHHHHTTCEEETTCEEEEECS--SEEEEECSSS--------------EEEEECSEEEECCCEE
T ss_pred CHHHhhhcCHHHHHHhcCcEEEecCEEEEEec--CCCEEEECCc--------------eEEEEcCEEEECCCCC
Confidence 4444444443434 678999999999988854 4567777665 1279999999999963
No 210
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=88.25 E-value=1.7 Score=40.58 Aligned_cols=60 Identities=17% Similarity=0.102 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeC----CeEEEE--ecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEG----NCMNVY--ISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~----~~~~V~--t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
..+...+.+.+++.|++|+.++.+..+...+ +.+.|+ ..+|. ++.++.+|.||+|+|.-.
T Consensus 250 ~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~------------~~~~~~~D~vi~a~G~~p 315 (519)
T 3qfa_A 250 QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSE------------EIIEGEYNTVMLAIGRDA 315 (519)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSS------------CEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCc------------EEEEEECCEEEEecCCcc
Confidence 4566777778889999999999888887542 344443 34441 124678999999999743
No 211
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=88.12 E-value=1.1 Score=42.60 Aligned_cols=51 Identities=8% Similarity=0.053 Sum_probs=39.7
Q ss_pred HHHHHHHCCcEEEcCceeEEEEEeCCeEEEEe-cCCcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 50 LVGEAENHGTTFSNNTSVIGGHLEGNCMNVYI-SESKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 50 l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t-~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
+...+++.|++++.+++|+++..+++.+.+.+ .+| +..++++|+||+|+|.
T Consensus 99 ~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g-------------~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 99 VERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTN-------------ETYNEAYDVLILSPGA 150 (588)
T ss_dssp HHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTC-------------CEEEEECSEEEECCCE
T ss_pred HHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCC-------------CEEEEeCCEEEECCCC
Confidence 33445678999999999999998878887765 234 1246899999999996
No 212
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=87.93 E-value=0.77 Score=41.22 Aligned_cols=55 Identities=15% Similarity=0.152 Sum_probs=38.1
Q ss_pred HHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 47 MLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 47 ~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
...+.+.+++.|++++.+ +|+++..+++. |++.++. +...++++|+||+|+|...
T Consensus 59 ~~~~~~~~~~~gv~~~~~-~v~~i~~~~~~--V~~~~g~-----------~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 59 KVDLSEALPEKGIQFQEG-TVEKIDAKSSM--VYYTKPD-----------GSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp EEEHHHHTGGGTCEEEEC-EEEEEETTTTE--EEEECTT-----------SCEEEEECSEEEECCCCEE
T ss_pred HHHHHHHHhhCCeEEEEe-eEEEEeCCCCE--EEEccCC-----------cccceeeCCEEEECCCCCc
Confidence 344555566789999987 89888776554 4444442 1123599999999999854
No 213
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=87.90 E-value=0.73 Score=42.37 Aligned_cols=47 Identities=13% Similarity=-0.045 Sum_probs=33.8
Q ss_pred HHHCCcEEEcCceeEEEEEeCCeEEEEec-CCcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 54 AENHGTTFSNNTSVIGGHLEGNCMNVYIS-ESKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 54 a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~-~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
+++.|++++.+++|++++.+++.+.+... +| +..++++|++|+|+|.
T Consensus 76 ~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g-------------~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 76 RINKDVEALVETRAHAIDRAAHTVEIENLRTG-------------ERRTLKYDKLVLALGS 123 (472)
T ss_dssp -----CEEECSEEEEEEETTTTEEEEEETTTC-------------CEEEEECSEEEECCCE
T ss_pred hhhcCcEEEECCEEEEEECCCCEEEEeecCCC-------------CEEEEECCEEEEeCCC
Confidence 34579999999999999888777777652 23 1237999999999996
No 214
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=87.75 E-value=0.54 Score=43.42 Aligned_cols=58 Identities=10% Similarity=0.019 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHCC-cEEEcCceeEEEEEeCCe------EEEEecCCcccccCCCCCCCCCc-eeEecCEEEEcCCCCc
Q 023079 44 HSLMLSLVGEAENHG-TTFSNNTSVIGGHLEGNC------MNVYISESKNLRNWDGVSPLQPE-LTLIPKLVVNSAGLSA 115 (287)
Q Consensus 44 ~~l~~~l~~~a~~~G-v~~~~~~~V~~i~~~~~~------~~V~t~~g~~~~~~~~~~~~~~~-~~i~a~~VV~aaG~~s 115 (287)
..++.+|++ ..| ++|+.+++|++|..++++ |.|++.++. + +. .+++||+||+|+.++.
T Consensus 243 ~~l~~~l~~---~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~-g----------~~~~~~~ad~VI~a~p~~~ 308 (504)
T 1sez_A 243 QTLTDAICK---DLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPH-K----------RQSEEESFDAVIMTAPLCD 308 (504)
T ss_dssp HHHHHHHHT---TSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSS-S----------SCBCCCEESEEEECSCHHH
T ss_pred HHHHHHHHh---hcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCC-C----------ccceeEECCEEEECCCHHH
Confidence 455666653 345 789999999999988776 777664320 1 01 2689999999999753
No 215
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=87.72 E-value=0.21 Score=44.62 Aligned_cols=51 Identities=16% Similarity=0.159 Sum_probs=43.3
Q ss_pred eecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 40 IVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
.++-..+...|.+.+.+.|++++++++|+++... . .++||.||.|.|.+|.
T Consensus 94 ~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~----------~----------------~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 94 GVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL----------P----------------LADYDLVVLANGVNHK 144 (381)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC----------C----------------GGGCSEEEECCGGGGG
T ss_pred eecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc----------c----------------cccCCEEEECCCCCch
Confidence 5778899999999999999999999999877421 1 4689999999999986
No 216
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=87.46 E-value=0.97 Score=41.74 Aligned_cols=47 Identities=9% Similarity=0.037 Sum_probs=36.6
Q ss_pred HHCCcEEEcCceeEEEEEeCCeEEEEe-cCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 55 ENHGTTFSNNTSVIGGHLEGNCMNVYI-SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 55 ~~~Gv~~~~~~~V~~i~~~~~~~~V~t-~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
++.|++++.+++|+++..+++.+.+.+ .+|. +.++++|+||+|+|..
T Consensus 104 ~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~-------------~~~~~~d~lviAtG~~ 151 (480)
T 3cgb_A 104 DKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKD-------------VFEFSYDRLLIATGVR 151 (480)
T ss_dssp HTTCCEEESSEEEEEEETTTTEEEEEETTTCC-------------EEEEECSEEEECCCEE
T ss_pred hhcCCEEEeCCEEEEEECCCCEEEEEEcCCCc-------------eEEEEcCEEEECCCCc
Confidence 345999999999999987777777765 3451 2369999999999964
No 217
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=87.40 E-value=0.73 Score=41.60 Aligned_cols=45 Identities=11% Similarity=0.122 Sum_probs=36.3
Q ss_pred HHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 53 EAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 53 ~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
..+++|++++.+++|+.+...+. .|++.+|. ++.+|++|+|+|..
T Consensus 66 ~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~---------------~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 66 WYGEARIDMLTGPEVTALDVQTR--TISLDDGT---------------TLSADAIVIATGSR 110 (410)
T ss_dssp HHHHTTCEEEESCCEEEEETTTT--EEEETTSC---------------EEECSEEEECCCEE
T ss_pred HHHHCCCEEEeCCEEEEEECCCC--EEEECCCC---------------EEECCEEEEccCCc
Confidence 34578999999999999976543 56777773 79999999999965
No 218
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=87.15 E-value=0.59 Score=42.43 Aligned_cols=61 Identities=7% Similarity=-0.037 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHHH
Q 023079 46 LMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAKR 121 (287)
Q Consensus 46 l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~~ 121 (287)
+...+.+.++++|++++++++|++++. +.+.++..++. ..++.+|.||+|+|......+..
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~v~~~~~~~~-------------g~~i~~D~vv~a~G~~~~~~l~~ 262 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEP--DKVIYEDLNGN-------------THEVPAKFTMFMPSFQGPEVVAS 262 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECS--SEEEEECTTSC-------------EEEEECSEEEEECEEECCHHHHT
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeC--CeEEEEecCCC-------------ceEEeeeEEEECCCCccchhHhh
Confidence 456666778899999999999988853 44444432221 12799999999999876665544
No 219
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=87.14 E-value=0.72 Score=46.09 Aligned_cols=48 Identities=15% Similarity=0.106 Sum_probs=36.0
Q ss_pred CcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 58 GTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 58 Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
+..|+.+++|+.|...++++.|++.+..+ .+...+++||+||+|....
T Consensus 581 ~l~I~Lnt~V~~I~~~~~gV~V~~~~~~~---------~~~g~~i~AD~VIvTvPl~ 628 (852)
T 2xag_A 581 GLDIKLNTAVRQVRYTASGCEVIAVNTRS---------TSQTFIYKCDAVLCTLPLG 628 (852)
T ss_dssp TCCEECSEEEEEEEEETTEEEEEEEESSS---------TTCEEEEEESEEEECCCHH
T ss_pred CCCEEeCCeEEEEEEcCCcEEEEEeeccc---------CCCCeEEECCEEEECCCHH
Confidence 56899999999999999899888765100 0001279999999998864
No 220
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=87.00 E-value=0.56 Score=44.78 Aligned_cols=56 Identities=11% Similarity=0.065 Sum_probs=39.6
Q ss_pred HHHCCcEEEcCceeEEEEEeC----CeE-EEEe--cCCcccccCCCCCCCCCceeEec-CEEEEcCCC-CchHHHHHh
Q 023079 54 AENHGTTFSNNTSVIGGHLEG----NCM-NVYI--SESKNLRNWDGVSPLQPELTLIP-KLVVNSAGL-SAPALAKRF 122 (287)
Q Consensus 54 a~~~Gv~~~~~~~V~~i~~~~----~~~-~V~t--~~g~~~~~~~~~~~~~~~~~i~a-~~VV~aaG~-~s~~l~~~~ 122 (287)
+.+.|+++++++.|+.|..++ +++ .|+. .+| +.++++| +.||+|||+ .+++|+...
T Consensus 241 ~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g-------------~~~~v~A~k~VILaaG~~~sp~lL~~S 305 (587)
T 1gpe_A 241 YQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKA-------------VNFDVFAKHEVLLAAGSAISPLILEYS 305 (587)
T ss_dssp TTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETT-------------EEEEEEEEEEEEECSCTTTHHHHHHHT
T ss_pred hcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCC-------------cEEEEEecccEEEccCCCCCHHHHHhC
Confidence 345689999999999998753 233 2443 344 2357889 899999999 566676555
No 221
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=86.83 E-value=0.89 Score=41.50 Aligned_cols=50 Identities=18% Similarity=0.132 Sum_probs=37.6
Q ss_pred HHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 54 AENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 54 a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
.+++|++++.+++|+++..+...+.+...... ...++.+|++|+|+|+..
T Consensus 67 ~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~------------~~~~~~yd~lVIATGs~p 116 (437)
T 4eqs_A 67 YDRKQITVKTYHEVIAINDERQTVSVLNRKTN------------EQFEESYDKLILSPGASA 116 (437)
T ss_dssp HHHHCCEEEETEEEEEEETTTTEEEEEETTTT------------EEEEEECSEEEECCCEEE
T ss_pred HHhcCCEEEeCCeEEEEEccCcEEEEEeccCC------------ceEEEEcCEEEECCCCcc
Confidence 45679999999999999887776666544321 124799999999999753
No 222
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=86.80 E-value=0.42 Score=44.37 Aligned_cols=59 Identities=7% Similarity=0.128 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHCCcEEEcC--ceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHHHH
Q 023079 43 SHSLMLSLVGEAENHGTTFSNN--TSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPALAK 120 (287)
Q Consensus 43 p~~l~~~l~~~a~~~Gv~~~~~--~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l~~ 120 (287)
+..++.+|++.+.+. +++.+ ++|++|..++++|. +.+|. +++||+||+|+.++ .+.+
T Consensus 215 ~~~l~~~la~~l~~~--~i~~~~~~~V~~I~~~~~~v~--~~~G~---------------~~~ad~VI~a~p~~--~~~~ 273 (484)
T 4dsg_A 215 TGIIYQAIKEKLPSE--KLTFNSGFQAIAIDADAKTIT--FSNGE---------------VVSYDYLISTVPFD--NLLR 273 (484)
T ss_dssp THHHHHHHHHHSCGG--GEEECGGGCEEEEETTTTEEE--ETTSC---------------EEECSEEEECSCHH--HHHH
T ss_pred HHHHHHHHHhhhhhC--eEEECCCceeEEEEecCCEEE--ECCCC---------------EEECCEEEECCCHH--HHHH
Confidence 567778877655432 67777 57999998877654 46662 79999999999765 4444
Q ss_pred Hh
Q 023079 121 RF 122 (287)
Q Consensus 121 ~~ 122 (287)
.+
T Consensus 274 ll 275 (484)
T 4dsg_A 274 MT 275 (484)
T ss_dssp HE
T ss_pred Hh
Confidence 44
No 223
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=86.29 E-value=1.4 Score=37.98 Aligned_cols=53 Identities=13% Similarity=0.075 Sum_probs=36.3
Q ss_pred HHHCCcEEEcCceeEEEEEeCC--eE-EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 54 AENHGTTFSNNTSVIGGHLEGN--CM-NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 54 a~~~Gv~~~~~~~V~~i~~~~~--~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
.++.|++++.+++|.++..+++ ++ .|++.+..+ ++..++.+|.||+|+|.-.+
T Consensus 205 ~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~----------g~~~~i~~D~vi~a~G~~p~ 260 (333)
T 1vdc_A 205 LSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVT----------GDVSDLKVSGLFFAIGHEPA 260 (333)
T ss_dssp HTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTT----------CCEEEEECSEEEECSCEEES
T ss_pred HhCCCeeEecCCceEEEeCCCCccceeeEEEEecCC----------CceEEEecCEEEEEeCCccc
Confidence 3567999999999999987654 43 244432100 11237999999999997544
No 224
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=85.79 E-value=0.51 Score=42.62 Aligned_cols=45 Identities=13% Similarity=0.092 Sum_probs=35.6
Q ss_pred HHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 54 AENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 54 a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
+++.|++++.+++|+++..++ +.|++.+|. ++++|+||+|+|...
T Consensus 69 ~~~~~v~~~~~~~v~~i~~~~--~~v~~~~g~---------------~~~~d~lviAtG~~~ 113 (408)
T 2gqw_A 69 KRAPEVEWLLGVTAQSFDPQA--HTVALSDGR---------------TLPYGTLVLATGAAP 113 (408)
T ss_dssp TTSCSCEEEETCCEEEEETTT--TEEEETTSC---------------EEECSEEEECCCEEE
T ss_pred HHHCCCEEEcCCEEEEEECCC--CEEEECCCC---------------EEECCEEEECCCCCC
Confidence 456799999999999987654 456777762 799999999999743
No 225
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=85.32 E-value=1.6 Score=40.04 Aligned_cols=46 Identities=17% Similarity=0.118 Sum_probs=37.0
Q ss_pred cEEEcCceeEEEEEeC-CeEEEEec--CCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 59 TTFSNNTSVIGGHLEG-NCMNVYIS--ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 59 v~~~~~~~V~~i~~~~-~~~~V~t~--~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
++++.+++|+++..++ +++.|++. +|. +.++.+|.||+|+|...+.
T Consensus 226 v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~-------------~~~i~~D~vi~a~G~~p~~ 274 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIKDDEYEVIYSTKDGS-------------KKSIFTNSVVLAAGRRPVI 274 (466)
T ss_dssp CCEECSCCEEEEEEEETTEEEEEECCTTSC-------------CEEEEESCEEECCCEEECC
T ss_pred EEEEECCEEEEEEEcCCCcEEEEEEecCCc-------------eEEEEcCEEEECcCCCccc
Confidence 9999999999998876 77777776 451 2379999999999976543
No 226
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=85.27 E-value=1 Score=40.17 Aligned_cols=55 Identities=20% Similarity=0.194 Sum_probs=39.3
Q ss_pred cHHHHHH-HHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 42 DSHSLML-SLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 42 dp~~l~~-~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
.+..+.. .+...+++.|++++.+++|+.+...+. .|++.++ ++++|++|+|+|..
T Consensus 57 ~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~----------------~~~~d~lviAtG~~ 112 (384)
T 2v3a_A 57 DADGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQ--RIWIGEE----------------EVRYRDLVLAWGAE 112 (384)
T ss_dssp CHHHHEEECHHHHHHHTTCEEECSCCCCEEEGGGT--EEEETTE----------------EEECSEEEECCCEE
T ss_pred CHHHhhccCHHHHHHhCCcEEEeCCEEEEEECCCC--EEEECCc----------------EEECCEEEEeCCCC
Confidence 4445443 233445778999999999998876543 4555554 79999999999974
No 227
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=85.24 E-value=1.5 Score=40.18 Aligned_cols=49 Identities=12% Similarity=0.091 Sum_probs=35.2
Q ss_pred HHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 50 LVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 50 l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
+...+++.|++++.++.+. + +.+.+.|.+.+|. ..++++|+||+|+|..
T Consensus 99 ~~~~~~~~~v~~~~g~~~~-i--~~~~~~v~~~~G~-------------~~~~~~d~lviAtG~~ 147 (468)
T 2qae_A 99 VEYLFKKNKVTYYKGEGSF-E--TAHSIRVNGLDGK-------------QEMLETKKTIIATGSE 147 (468)
T ss_dssp HHHHHHHHTCEEEEEEEEE-E--ETTEEEEEETTSC-------------EEEEEEEEEEECCCEE
T ss_pred HHHHHHhCCCEEEEEEEEE-e--eCCEEEEEecCCc-------------eEEEEcCEEEECCCCC
Confidence 3445667899999877542 3 4567888887661 1279999999999973
No 228
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=84.54 E-value=2.1 Score=41.29 Aligned_cols=52 Identities=15% Similarity=0.042 Sum_probs=38.4
Q ss_pred HHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 49 SLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 49 ~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
.+.+.++++|++++.+++|+++. ++++.++ .+|. +.++.+|.||+|+|.-.+
T Consensus 578 ~~~~~l~~~GV~v~~~~~v~~i~--~~~v~~~-~~G~-------------~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 578 IHRTTLLSRGVKMIPGVSYQKID--DDGLHVV-INGE-------------TQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp HHHHHHHHTTCEEECSCEEEEEE--TTEEEEE-ETTE-------------EEEECCSEEEECCCEEEC
T ss_pred HHHHHHHhcCCEEEeCcEEEEEe--CCeEEEe-cCCe-------------EEEEeCCEEEECCCcccc
Confidence 34456778999999999998886 3555554 4451 137999999999997654
No 229
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=84.48 E-value=1.1 Score=40.91 Aligned_cols=54 Identities=11% Similarity=0.230 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
..+...+.+..+++|++++.+++|.+++ ++ .|++++|. ++.+|.||+|+|.-.+
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~--~~--~v~~~~g~---------------~~~~D~vl~a~G~~Pn 241 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAIN--GN--EITFKSGK---------------VEHYDMIIEGVGTHPN 241 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEE--TT--EEEETTSC---------------EEECSEEEECCCEEES
T ss_pred chhHHHHHHHhhccceEEEeccEEEEec--CC--eeeecCCe---------------EEeeeeEEEEeceecC
Confidence 3455667778889999999999998774 33 36667773 7999999999997543
No 230
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=83.36 E-value=2.4 Score=39.63 Aligned_cols=55 Identities=9% Similarity=0.038 Sum_probs=38.2
Q ss_pred HHHHHHH-CCcEEEcCceeEEEEEeCCeE-EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 50 LVGEAEN-HGTTFSNNTSVIGGHLEGNCM-NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 50 l~~~a~~-~Gv~~~~~~~V~~i~~~~~~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
+.+.+.+ .|++++.+++|+++..+++++ .|+..++.+ +++.++.+|.||+|+|.-
T Consensus 396 l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~----------g~~~~i~~D~vi~a~G~~ 452 (521)
T 1hyu_A 396 LQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVS----------GDIHSVALAGIFVQIGLL 452 (521)
T ss_dssp HHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTT----------CCEEEEECSEEEECCCEE
T ss_pred HHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCC----------CceEEEEcCEEEECcCCC
Confidence 3444555 599999999999998765555 355543211 123479999999999964
No 231
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=83.35 E-value=0.78 Score=42.61 Aligned_cols=60 Identities=28% Similarity=0.345 Sum_probs=44.7
Q ss_pred cHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEe-cCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 42 DSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYI-SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 42 dp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t-~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
++..+...+.+.+ +.|++++.+++|.++..+++.+.+.+ +++. ..++.+|++|+|+|+..
T Consensus 159 ~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~-------------~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 159 DSRKVVEELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDK-------------LIEILAKRVVLATGAID 219 (493)
T ss_dssp EHHHHHHHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTE-------------EEEEEESCEEECCCEEE
T ss_pred CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCe-------------EEEEECCEEEECCCCCc
Confidence 5667777766655 67999999999999988777666554 3331 13689999999999753
No 232
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=83.26 E-value=2.5 Score=38.79 Aligned_cols=48 Identities=8% Similarity=-0.020 Sum_probs=34.6
Q ss_pred HHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 51 VGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 51 ~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
...+++.|++++.++.+ .+ +.+.+.|++.+|. ..++++|+||+|+|..
T Consensus 104 ~~~~~~~gv~~~~g~~~-~~--~~~~~~v~~~~gg-------------~~~~~~d~lViAtGs~ 151 (474)
T 1zmd_A 104 AHLFKQNKVVHVNGYGK-IT--GKNQVTATKADGG-------------TQVIDTKNILIATGSE 151 (474)
T ss_dssp HHHHHHTTCEEEESEEE-EE--ETTEEEEECTTSC-------------EEEEEEEEEEECCCEE
T ss_pred HHHHHhCCCEEEEEEEE-Ee--cCCEEEEEecCCC-------------cEEEEeCEEEECCCCC
Confidence 45567789999988654 23 4567888887631 1279999999999974
No 233
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=83.16 E-value=1.4 Score=39.58 Aligned_cols=48 Identities=8% Similarity=0.048 Sum_probs=37.6
Q ss_pred HHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 50 LVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 50 l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
......+.|++++.+++|+.+...+. .|.+.+|. ++.+|++|+|+|..
T Consensus 71 ~~~~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~---------------~~~~d~lvlAtG~~ 118 (415)
T 3lxd_A 71 PAQFWEDKAVEMKLGAEVVSLDPAAH--TVKLGDGS---------------AIEYGKLIWATGGD 118 (415)
T ss_dssp CHHHHHHTTEEEEETCCEEEEETTTT--EEEETTSC---------------EEEEEEEEECCCEE
T ss_pred CHHHHHHCCcEEEeCCEEEEEECCCC--EEEECCCC---------------EEEeeEEEEccCCc
Confidence 34455678999999999999876543 56777773 79999999999953
No 234
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=82.80 E-value=1.8 Score=37.48 Aligned_cols=49 Identities=18% Similarity=0.170 Sum_probs=34.6
Q ss_pred HHCCcEEEcCceeEEEEEeCCeEEEEec---CCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 55 ENHGTTFSNNTSVIGGHLEGNCMNVYIS---ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 55 ~~~Gv~~~~~~~V~~i~~~~~~~~V~t~---~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
++.|++++.+++|.++..+++...|++. +| +..++.+|.||+|+|.-.+
T Consensus 202 ~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g-------------~~~~i~~D~vi~a~G~~p~ 253 (335)
T 2a87_A 202 NNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTG-------------AETTLPVTGVFVAIGHEPR 253 (335)
T ss_dssp HCTTEEEECSEEEEEEECSSSCCEEEEEEETTS-------------CCEEECCSCEEECSCEEEC
T ss_pred ccCCcEEEeCceeEEEecCCcEeEEEEEEcCCC-------------ceEEeecCEEEEccCCccC
Confidence 5689999999999999766532233332 33 1237999999999997533
No 235
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=82.27 E-value=0.88 Score=42.26 Aligned_cols=44 Identities=16% Similarity=0.220 Sum_probs=35.3
Q ss_pred HHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 55 ENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 55 ~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
.+.|++++.+++|+++..++. .|++++|. ++.+|+||+|+|...
T Consensus 101 ~~~gv~~~~g~~v~~id~~~~--~V~~~~g~---------------~i~yd~lviATGs~p 144 (493)
T 1m6i_A 101 ENGGVAVLTGKKVVQLDVRDN--MVKLNDGS---------------QITYEKCLIATGGTP 144 (493)
T ss_dssp TTCEEEEEETCCEEEEEGGGT--EEEETTSC---------------EEEEEEEEECCCEEE
T ss_pred hcCCeEEEcCCEEEEEECCCC--EEEECCCC---------------EEECCEEEECCCCCC
Confidence 356899999999999977543 56777772 799999999999754
No 236
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=82.20 E-value=0.22 Score=45.31 Aligned_cols=48 Identities=17% Similarity=0.114 Sum_probs=36.0
Q ss_pred HHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 50 LVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 50 l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
+.+.+++.|++++. .+|+.++.+++ .|+++++. ++++|+||+|+|...
T Consensus 62 ~~~~~~~~gv~~~~-~~v~~id~~~~--~v~~~~g~---------------~i~~d~liiAtG~~~ 109 (430)
T 3h28_A 62 LAPLLPKFNIEFIN-EKAESIDPDAN--TVTTQSGK---------------KIEYDYLVIATGPKL 109 (430)
T ss_dssp STTTGGGGTEEEEC-SCEEEEETTTT--EEEETTCC---------------EEECSEEEECCCCEE
T ss_pred HHHHHHhcCCEEEE-EEEEEEECCCC--EEEECCCc---------------EEECCEEEEcCCccc
Confidence 33445668999986 48988876544 56777772 699999999999863
No 237
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=81.98 E-value=1 Score=42.47 Aligned_cols=42 Identities=7% Similarity=0.167 Sum_probs=32.1
Q ss_pred HHHCCcEEEc--CceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 54 AENHGTTFSN--NTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 54 a~~~Gv~~~~--~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
..+.+|+++. .++|..+... + |.|.+| ++.+|.||.|||.-+
T Consensus 348 l~~~nV~lv~~~~~~I~~it~~--g--v~~~dG----------------~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 348 YNRDNVHLVDIREAPIQEVTPE--G--IKTADA----------------AYDLDVIIYATGFDA 391 (545)
T ss_dssp TTSTTEEEEETTTSCEEEEETT--E--EEESSC----------------EEECSEEEECCCCBS
T ss_pred hcCCCEEEEecCCCCceEEccC--e--EEeCCC----------------eeecCEEEECCcccc
Confidence 3445788885 6788777542 2 778888 799999999999865
No 238
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=81.40 E-value=2.3 Score=38.07 Aligned_cols=45 Identities=9% Similarity=0.128 Sum_probs=35.7
Q ss_pred HHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 51 VGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 51 ~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
.....+.|++++. ++|+++..++. .|++.+|. ++.+|++|+|+|.
T Consensus 64 ~~~~~~~~i~~~~-~~v~~id~~~~--~v~~~~g~---------------~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 64 EKFFQDQAIELIS-DRMVSIDREGR--KLLLASGT---------------AIEYGHLVLATGA 108 (404)
T ss_dssp HHHHHHTTEEEEC-CCEEEEETTTT--EEEESSSC---------------EEECSEEEECCCE
T ss_pred HHHHHhCCCEEEE-EEEEEEECCCC--EEEECCCC---------------EEECCEEEEeeCC
Confidence 3445678999998 99999977654 46677773 7999999999996
No 239
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=81.34 E-value=2.4 Score=37.72 Aligned_cols=44 Identities=16% Similarity=0.188 Sum_probs=34.1
Q ss_pred HHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 54 AENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 54 a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
+.++|++++. .+|++|+.+++ .|++.+|. ++..|++|+|+|+..
T Consensus 65 ~~~~gv~~i~-~~v~~id~~~~--~v~~~~g~---------------~i~yd~LviAtG~~~ 108 (401)
T 3vrd_B 65 LRAHGIQVVH-DSALGIDPDKK--LVKTAGGA---------------EFAYDRCVVAPGIDL 108 (401)
T ss_dssp HHHTTCEEEC-SCEEEEETTTT--EEEETTSC---------------EEECSEEEECCCEEE
T ss_pred HHHCCCEEEE-eEEEEEEccCc--EEEecccc---------------eeecceeeeccCCcc
Confidence 4567999986 47888877654 46677773 799999999999753
No 240
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=80.89 E-value=2 Score=39.78 Aligned_cols=51 Identities=8% Similarity=0.001 Sum_probs=35.8
Q ss_pred HHHHHHHCCcEEEcCceeEEEEEe----CCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 50 LVGEAENHGTTFSNNTSVIGGHLE----GNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 50 l~~~a~~~Gv~~~~~~~V~~i~~~----~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
+.+.+++.|++++.++ +..+..+ ++.+.|.+++|. ..++++|++|+|+|..
T Consensus 101 ~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g~-------------~~~~~~d~lviATGs~ 155 (499)
T 1xdi_A 101 ITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAADGS-------------TSEHEADVVLVATGAS 155 (499)
T ss_dssp HHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTTSC-------------EEEEEESEEEECCCEE
T ss_pred HHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCCCc-------------EEEEEeCEEEEcCCCC
Confidence 4556678899999886 5555432 245778777661 1269999999999974
No 241
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=80.79 E-value=1.1 Score=42.64 Aligned_cols=63 Identities=25% Similarity=0.192 Sum_probs=40.8
Q ss_pred HHHHHH-HHCCcEEEcCceeEEEEEe----C-CeE-EEEecCCcccccCCCCCCCC-CceeEec-CEEEEcCCCC-chHH
Q 023079 49 SLVGEA-ENHGTTFSNNTSVIGGHLE----G-NCM-NVYISESKNLRNWDGVSPLQ-PELTLIP-KLVVNSAGLS-APAL 118 (287)
Q Consensus 49 ~l~~~a-~~~Gv~~~~~~~V~~i~~~----~-~~~-~V~t~~g~~~~~~~~~~~~~-~~~~i~a-~~VV~aaG~~-s~~l 118 (287)
+++..+ .+.+.++++++.|+.|..+ + ++. .|+..++. + +.++++| +-||+|||+. +++|
T Consensus 212 ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~-----------g~~~~~v~A~kEVILsAGai~SPql 280 (566)
T 3fim_B 212 AYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQE-----------GAPTTTVCAKKEVVLSAGSVGTPIL 280 (566)
T ss_dssp HTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESST-----------TSCCEEEEEEEEEEECCHHHHHHHH
T ss_pred HHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECC-----------CceEEEEEeeeEEEEecCCcCChHH
Confidence 444433 4568999999999999876 3 232 35443320 1 3457889 6799999975 5566
Q ss_pred HHHh
Q 023079 119 AKRF 122 (287)
Q Consensus 119 ~~~~ 122 (287)
+...
T Consensus 281 L~lS 284 (566)
T 3fim_B 281 LQLS 284 (566)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 5544
No 242
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=80.74 E-value=3.2 Score=39.81 Aligned_cols=56 Identities=9% Similarity=-0.025 Sum_probs=37.8
Q ss_pred CCcEEEcCceeEEEEEeCC--eE-EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch-HHHHHh
Q 023079 57 HGTTFSNNTSVIGGHLEGN--CM-NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP-ALAKRF 122 (287)
Q Consensus 57 ~Gv~~~~~~~V~~i~~~~~--~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~-~l~~~~ 122 (287)
.|+++++++.|+.|..+++ ++ .|+..+..+ ++..++.||.||+|+|.... +++...
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~----------g~~~~i~A~~VIlaaG~~~s~~lL~~s 332 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLIS----------GDRFEIKADVYVLTAGAVHNTQLLVNS 332 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTT----------CCEEEECEEEEEECSCTTHHHHHHHTT
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCC----------CcEEEEECCEEEEcCCCcCCHHHHHhc
Confidence 3799999999999987643 33 355433111 12457999999999998654 455444
No 243
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=79.13 E-value=1.3 Score=43.24 Aligned_cols=65 Identities=11% Similarity=-0.094 Sum_probs=43.2
Q ss_pred EEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeE--EEEEeCCe-------EEEE-ecCCcccccCCCCCCCCCceeE
Q 023079 33 LLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVI--GGHLEGNC-------MNVY-ISESKNLRNWDGVSPLQPELTL 102 (287)
Q Consensus 33 l~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~--~i~~~~~~-------~~V~-t~~g~~~~~~~~~~~~~~~~~i 102 (287)
.+.+.+|. ..+..+|++.+.+ |..++.+++|+ .|...+++ +.|+ +.+|. +.++
T Consensus 339 ~~~i~GG~---~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~-------------~~~~ 401 (721)
T 3ayj_A 339 YTLPVTEN---VEFIRNLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNA-------------VHSE 401 (721)
T ss_dssp ECCSSSST---HHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCC-------------EEEE
T ss_pred eeEECCcH---HHHHHHHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCc-------------eEEE
Confidence 34444443 4677778776543 45566789999 99886544 7784 44451 2368
Q ss_pred ecCEEEEcCCCC
Q 023079 103 IPKLVVNSAGLS 114 (287)
Q Consensus 103 ~a~~VV~aaG~~ 114 (287)
+||+||+|+-..
T Consensus 402 ~aD~VIvTvP~~ 413 (721)
T 3ayj_A 402 AYDFVILAVPHD 413 (721)
T ss_dssp EESEEEECSCHH
T ss_pred EcCEEEECCCHH
Confidence 999999988743
No 244
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=78.99 E-value=2.7 Score=38.52 Aligned_cols=46 Identities=17% Similarity=0.149 Sum_probs=33.4
Q ss_pred HHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 52 GEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 52 ~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
..+++.|++++.+ ++..+. .+.+.|.+.+|. +.++++|+||+|+|.
T Consensus 97 ~~~~~~~v~~~~g-~v~~id--~~~~~V~~~~g~-------------~~~~~~d~lviAtG~ 142 (466)
T 3l8k_A 97 NMSQYETLTFYKG-YVKIKD--PTHVIVKTDEGK-------------EIEAETRYMIIASGA 142 (466)
T ss_dssp HHTTCTTEEEESE-EEEEEE--TTEEEEEETTSC-------------EEEEEEEEEEECCCE
T ss_pred HHHHhCCCEEEEe-EEEEec--CCeEEEEcCCCc-------------EEEEecCEEEECCCC
Confidence 3445679999876 565554 467888888772 112999999999996
No 245
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=78.71 E-value=2.1 Score=39.07 Aligned_cols=45 Identities=13% Similarity=0.080 Sum_probs=31.9
Q ss_pred HHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 51 VGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 51 ~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
...+++.|++++.++.+. .+.+.+.|.+ +|. ++++|+||+|+|..
T Consensus 96 ~~~~~~~~v~~~~g~~~~---i~~~~~~v~~-~g~---------------~~~~d~lviAtG~~ 140 (455)
T 2yqu_A 96 EFLFKKNGIARHQGTARF---LSERKVLVEE-TGE---------------ELEARYILIATGSA 140 (455)
T ss_dssp HHHHHHHTCEEEESCEEE---SSSSEEEETT-TCC---------------EEEEEEEEECCCEE
T ss_pred HHHHHhCCCEEEEeEEEE---ecCCeEEEee-CCE---------------EEEecEEEECCCCC
Confidence 445667799999876542 2345666766 552 79999999999973
No 246
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=78.47 E-value=6.6 Score=37.14 Aligned_cols=59 Identities=15% Similarity=0.088 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHCCcEEEcCceeEEEEEe------C---CeEEEE--ecCCcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 45 SLMLSLVGEAENHGTTFSNNTSVIGGHLE------G---NCMNVY--ISESKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 45 ~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~------~---~~~~V~--t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
.+...+.+.++++|+++++++.++.+... + +++.|+ ..+|. +..+.+|.||+|+|.
T Consensus 327 ~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~-------------~~~~~~D~vi~a~G~ 393 (598)
T 2x8g_A 327 QMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGK-------------KFEEEFETVIFAVGR 393 (598)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSC-------------EEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCc-------------EEeccCCEEEEEeCC
Confidence 45566667778899999999988888642 2 445443 34552 223459999999997
Q ss_pred Cch
Q 023079 114 SAP 116 (287)
Q Consensus 114 ~s~ 116 (287)
-.+
T Consensus 394 ~p~ 396 (598)
T 2x8g_A 394 EPQ 396 (598)
T ss_dssp EEC
T ss_pred ccc
Confidence 543
No 247
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=78.27 E-value=3.6 Score=37.24 Aligned_cols=61 Identities=16% Similarity=0.077 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEe--cCCcccccCCCCCCCCCceeEecCEEEEcCCCCchHH
Q 023079 46 LMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYI--SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPAL 118 (287)
Q Consensus 46 l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t--~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~l 118 (287)
+...+.+.++++|++++++++|++++ ++.+.++. .+|..+ +..++.+|.|++|+|.-....
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~--~~~v~~~~~~~~g~~~----------~~~~i~~D~vv~~~g~~~~~~ 272 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVE--DNKMYVTQVDEKGETI----------KEMVLPVKFGMMIPAFKGVPA 272 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEE--TTEEEEEEECTTSCEE----------EEEEEECSEEEEECCEECCHH
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEE--CCeEEEEecccCCccc----------cceEEEEeEEEEcCCCcCchh
Confidence 44556667788999999999998885 34555443 333100 013799999999998654443
No 248
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=76.86 E-value=6 Score=36.34 Aligned_cols=47 Identities=19% Similarity=0.053 Sum_probs=33.3
Q ss_pred HHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 52 GEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 52 ~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
...++.|++++.+..+. ...+.+.|.+.+|. ..++++|+||+|+|..
T Consensus 123 ~~~~~~~v~~~~g~~~~---~~~~~~~v~~~~g~-------------~~~~~~d~lViATGs~ 169 (491)
T 3urh_A 123 FLFKKNKIDGFQGTGKV---LGQGKVSVTNEKGE-------------EQVLEAKNVVIATGSD 169 (491)
T ss_dssp HHHHHTTCEEEESEEEE---CSSSEEEEECTTSC-------------EEEEECSEEEECCCEE
T ss_pred HHHHhCCCEEEEEEEEE---ecCCEEEEEeCCCc-------------eEEEEeCEEEEccCCC
Confidence 34567799998775432 33456788877662 2379999999999965
No 249
>4evu_A Putative periplasmic protein YDGH; structural genomics, PSI-biology, program for the characteri secreted effector proteins, pcsep; HET: MSE; 1.45A {Salmonella enterica subsp}
Probab=76.85 E-value=5.6 Score=26.65 Aligned_cols=65 Identities=14% Similarity=0.185 Sum_probs=40.1
Q ss_pred cCCCeeeeeCHHHHHhhCCCcccceeEEcCCceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEE-EeCCeEEEE
Q 023079 7 NGVHGLRMLEGFEAMKMEPELQCVKALLSPASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGH-LEGNCMNVY 80 (287)
Q Consensus 7 ~g~~~~~~L~~~ei~~~~P~l~~~~al~~p~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~-~~~~~~~V~ 80 (287)
.|.. ++.|+.+++..+.|.=. +-. .+-.-.|..+..+|.+.|.+.|+..+ .|++.. .+++.|.++
T Consensus 2 ~~~~-v~ei~~~qA~~lq~~gt----Vsv-sg~~~sp~D~~~~lskkAdekGA~~y---~Ii~~~~~~~gn~~aT 67 (72)
T 4evu_A 2 DGTK-VEELNKATAAMMVPFDS----VKF-TGNYGNMTEISYQVAKRAAKKGAKYY---HITRQWQERGNNITIS 67 (72)
T ss_dssp ---C-CEECCHHHHTTSCCSEE----EEE-EECCSSHHHHHHHHHHHHHHTTCSEE---EEEEEEEC---CEEEE
T ss_pred CCcE-eEEeCHHHHhhCeeccE----EEE-CCccCChHHHHHHHHHHHHHcCCCEE---EEEEeecCCCCCEEEE
Confidence 3565 89999999987776411 211 12245799999999999999999876 344332 233445443
No 250
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=75.87 E-value=8 Score=37.71 Aligned_cols=67 Identities=6% Similarity=-0.071 Sum_probs=41.2
Q ss_pred HHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEe--cCCccc----ccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 48 LSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYI--SESKNL----RNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 48 ~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t--~~g~~~----~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
..+.+.++++|++++.++.|+++.. +++.++. .++... .........+.+..+.||.||+|+|.-..
T Consensus 575 ~~~~~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~ 647 (729)
T 1o94_A 575 PNMMRRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSE 647 (729)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEEC
T ss_pred HHHHHHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCC
Confidence 4455667789999999999998863 4454442 222000 00011122344556999999999997654
No 251
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=75.85 E-value=3.7 Score=37.74 Aligned_cols=49 Identities=6% Similarity=-0.043 Sum_probs=33.8
Q ss_pred HHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 50 LVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 50 l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
+...+++.|++++.++ +..+ +.+.+.|.+.+|. ..++++|+||+|+|..
T Consensus 111 ~~~~~~~~gv~~~~g~-~~~i--~~~~~~v~~~~g~-------------~~~~~~d~lviAtGs~ 159 (479)
T 2hqm_A 111 YQKNLEKEKVDVVFGW-ARFN--KDGNVEVQKRDNT-------------TEVYSANHILVATGGK 159 (479)
T ss_dssp HHHHHHHTTEEEEEEE-EEEC--TTSCEEEEESSSC-------------CEEEEEEEEEECCCEE
T ss_pred HHHHHHhCCCEEEEeE-EEEe--eCCEEEEEeCCCc-------------EEEEEeCEEEEcCCCC
Confidence 3344567899998764 5443 3456778776661 2368999999999974
No 252
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=74.62 E-value=4.4 Score=37.05 Aligned_cols=47 Identities=17% Similarity=0.237 Sum_probs=33.3
Q ss_pred HHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 52 GEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 52 ~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
..+++.|++++.++.+. ...+.+.|.+.+|. ..++++|+||+|+|..
T Consensus 107 ~~~~~~~v~~~~g~~~~---~~~~~~~v~~~~g~-------------~~~~~~d~lvlAtG~~ 153 (476)
T 3lad_A 107 SLIKANGVTLFEGHGKL---LAGKKVEVTAADGS-------------SQVLDTENVILASGSK 153 (476)
T ss_dssp HHHHHHTCEEEESEEEE---CSTTCEEEECTTSC-------------EEEECCSCEEECCCEE
T ss_pred HHHHhCCCEEEEeEEEE---ecCCEEEEEcCCCc-------------eEEEEcCEEEEcCCCC
Confidence 34556799998775442 34456788877662 2379999999999974
No 253
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=74.29 E-value=3.1 Score=39.53 Aligned_cols=55 Identities=16% Similarity=0.161 Sum_probs=37.8
Q ss_pred HHCCcEEEcCceeEEEEEe--CCeE-EEEe--cCCcccccCCCCCCCCCceeEec-CEEEEcCCCCc-hHHHHHh
Q 023079 55 ENHGTTFSNNTSVIGGHLE--GNCM-NVYI--SESKNLRNWDGVSPLQPELTLIP-KLVVNSAGLSA-PALAKRF 122 (287)
Q Consensus 55 ~~~Gv~~~~~~~V~~i~~~--~~~~-~V~t--~~g~~~~~~~~~~~~~~~~~i~a-~~VV~aaG~~s-~~l~~~~ 122 (287)
.+.++++++++.|+.|..+ ++++ .|+. .+| +.++++| +-||+|||+.. ++|+...
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g-------------~~~~v~A~keVILsaGa~~sp~lL~~S 278 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAG-------------NELNFFADREVILSQGVFETPKLLMLS 278 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTS-------------CEEEEEEEEEEEECSHHHHHHHHHHHT
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCC-------------cEEEEEeeeEEEEcccccCChHHHHHc
Confidence 3568999999999999887 5544 2443 334 2457889 56999999864 4554443
No 254
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=74.06 E-value=4.2 Score=37.20 Aligned_cols=44 Identities=9% Similarity=0.036 Sum_probs=30.1
Q ss_pred HHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 51 VGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 51 ~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
...++++|++++.++.+. + +.+. |++. |. ++++|+||+|+|.+.
T Consensus 100 ~~~~~~~gv~~~~g~~~~-~--~~~~--v~v~-g~---------------~~~~d~lViATGs~p 143 (464)
T 2eq6_A 100 GTLLKGNGVELLRGFARL-V--GPKE--VEVG-GE---------------RYGAKSLILATGSEP 143 (464)
T ss_dssp HHHHHHTTCEEEESCEEE-E--ETTE--EEET-TE---------------EEEEEEEEECCCEEE
T ss_pred HHHHHhCCCEEEeeeEEE-c--cCCE--EEEc-cE---------------EEEeCEEEEcCCCCC
Confidence 344567899999887553 3 2334 4444 41 799999999999753
No 255
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=73.98 E-value=1.4 Score=41.61 Aligned_cols=43 Identities=9% Similarity=0.023 Sum_probs=32.6
Q ss_pred HCCcEEEc--CceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 56 NHGTTFSN--NTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 56 ~~Gv~~~~--~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
+.+|+++. .+.|..+..+ + |.|.+|. .+++|.||.|||.-+..
T Consensus 342 ~~nV~lv~~~~~~I~~it~~--g--v~~~dG~---------------~~~~DvIV~ATGf~~~~ 386 (540)
T 3gwf_A 342 RPNVEAVAIKENPIREVTAK--G--VVTEDGV---------------LHELDVLVFATGFDAVD 386 (540)
T ss_dssp STTEEEEETTTSCEEEECSS--E--EEETTCC---------------EEECSEEEECCCBSCSS
T ss_pred CCCEEEEeCCCCCccEEecC--e--EEcCCCC---------------EEECCEEEECCccCccc
Confidence 44788874 5677777542 2 7888883 69999999999998765
No 256
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=72.07 E-value=4.6 Score=41.14 Aligned_cols=65 Identities=15% Similarity=0.100 Sum_probs=42.1
Q ss_pred HHHHHCCcEEEcCceeEEEEEeCCeEE-EEec------CCcccccCCCCCCCCCceeEecCEEEEcCCCC--chHHHHHh
Q 023079 52 GEAENHGTTFSNNTSVIGGHLEGNCMN-VYIS------ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS--APALAKRF 122 (287)
Q Consensus 52 ~~a~~~Gv~~~~~~~V~~i~~~~~~~~-V~t~------~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~--s~~l~~~~ 122 (287)
+.+++.|++|+.++.+.++..+++++. |++. +|. .+...+.+.++.||.||+|+|.- ...|+..+
T Consensus 378 ~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~------~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~ 451 (1025)
T 1gte_A 378 ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGK------WNEDEDQIVHLKADVVISAFGSVLRDPKVKEAL 451 (1025)
T ss_dssp HHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSC------EEEEEEEEEEEECSEEEECSCEECCCHHHHHHT
T ss_pred HHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCC------cccCCCceEEEECCEEEECCCCCCCchhhhhcc
Confidence 456788999999999999877666553 4432 220 00011223479999999999984 35666553
No 257
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=71.92 E-value=3.2 Score=38.40 Aligned_cols=53 Identities=25% Similarity=0.243 Sum_probs=38.8
Q ss_pred HCCcEEEcCceeEEEEEeCCeEE-EE--ecCCcccccCCCCCCCCCceeEecCEEEEcCCCC-chHHHHHh
Q 023079 56 NHGTTFSNNTSVIGGHLEGNCMN-VY--ISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS-APALAKRF 122 (287)
Q Consensus 56 ~~Gv~~~~~~~V~~i~~~~~~~~-V~--t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~-s~~l~~~~ 122 (287)
+.+.++.+++.|+.+..++++.. |. ..++ ..++.|+.||+|||+. +++|+...
T Consensus 223 r~nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~--------------~~~~~a~~VILsAGai~SP~LLl~S 279 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEGNQVRSLEVVGRQG--------------SAEVFADQIVLCAGALESPALLMRS 279 (526)
T ss_dssp CTTEEEECSCEEEEEEEETTEEEEEEEEETTE--------------EEEEEEEEEEECSHHHHHHHHHHHT
T ss_pred CCCeEEEeCCEEEEEEecCCeEEEEEEEecCc--------------eEEEeecceEEcccccCCcchhhhc
Confidence 45789999999999998887643 43 3333 3478999999999985 55665544
No 258
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=71.20 E-value=11 Score=31.88 Aligned_cols=58 Identities=14% Similarity=0.160 Sum_probs=39.8
Q ss_pred eecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 40 IVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 40 ~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
.+.+..+.........+.+..+..+..+...... ....+ +.++. ++++|+||+|+|+.
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~---------------~~~~d~liiAtGs~ 115 (312)
T 4gcm_A 58 MITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKG-EYKVI-NFGNK---------------ELTAKAVIIATGAE 115 (312)
T ss_dssp SBCHHHHHHHHHHHHHHTTCEEEECCCCEEEECS-SCEEE-ECSSC---------------EEEEEEEEECCCEE
T ss_pred ccchHHHHHHHHHHHhhccccccceeeeeeeeee-cceee-ccCCe---------------EEEeceeEEcccCc
Confidence 4566778877777888888888777666544332 22333 34442 89999999999964
No 259
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=71.04 E-value=11 Score=35.01 Aligned_cols=46 Identities=9% Similarity=-0.031 Sum_probs=32.0
Q ss_pred HHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 53 EAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 53 ~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
..++.|++++.+. +..+ ..+.+.|.+.+|. ..++++|+||+|+|..
T Consensus 139 ~~~~~gV~~i~g~-a~~~--d~~~v~v~~~~g~-------------~~~i~~d~lViATGs~ 184 (519)
T 3qfa_A 139 ALREKKVVYENAY-GQFI--GPHRIKATNNKGK-------------EKIYSAERFLIATGER 184 (519)
T ss_dssp HHHHTTCEEECSE-EEEE--ETTEEEEECTTCC-------------CCEEEEEEEEECCCEE
T ss_pred HHHhCCCEEEEEE-EEEe--eCCEEEEEcCCCC-------------EEEEECCEEEEECCCC
Confidence 3456799998764 3333 3456778777662 2379999999999963
No 260
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=70.15 E-value=2.1 Score=40.34 Aligned_cols=42 Identities=12% Similarity=0.212 Sum_probs=30.6
Q ss_pred HCCcEEE--cCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 56 NHGTTFS--NNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 56 ~~Gv~~~--~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
+.+|+++ ..++|..+.. ++ |.|.+| ++.+|.||+|||.-+..
T Consensus 355 ~~~V~lvd~~~~~I~~it~--~g--v~~~dG----------------~~~~D~iI~ATGf~~~~ 398 (549)
T 4ap3_A 355 RDNVELVDLRSTPIVGMDE--TG--IVTTGA----------------HYDLDMIVLATGFDAMT 398 (549)
T ss_dssp STTEEEEETTTSCEEEEET--TE--EEESSC----------------EEECSEEEECCCEEESS
T ss_pred CCCEEEEeCCCCCceEEeC--Cc--EEeCCC----------------ceecCEEEECCcccccc
Confidence 3467777 2367777754 22 778888 79999999999987654
No 261
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=68.69 E-value=7.9 Score=35.23 Aligned_cols=42 Identities=14% Similarity=0.215 Sum_probs=30.0
Q ss_pred HHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 52 GEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 52 ~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
..++++|++++.++.+. + ++. .|++++. ++++|+||+|+|..
T Consensus 104 ~~~~~~gv~~~~g~~~~-~--~~~--~v~v~~~----------------~~~~d~lviATGs~ 145 (458)
T 1lvl_A 104 ALLKKHGVKVVHGWAKV-L--DGK--QVEVDGQ----------------RIQCEHLLLATGSS 145 (458)
T ss_dssp HHHHHTTCEEECSCEEE-E--ETT--EEEETTE----------------EEECSEEEECCCEE
T ss_pred HHHHhCCcEEEEEEEEE-c--cCC--EEEEeeE----------------EEEeCEEEEeCCCC
Confidence 45667899999887653 2 233 3444443 79999999999985
No 262
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=68.50 E-value=7 Score=35.58 Aligned_cols=45 Identities=13% Similarity=0.122 Sum_probs=31.8
Q ss_pred HHHC-CcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 54 AENH-GTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 54 a~~~-Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
++++ |++++.+ ++..+. .+.+.|.+.+|. ..++++|+||+|+|..
T Consensus 104 ~~~~~~v~~~~g-~~~~~~--~~~~~v~~~~g~-------------~~~~~~d~lviAtGs~ 149 (467)
T 1zk7_A 104 LGGNPAITVVHG-EARFKD--DQSLTVRLNEGG-------------ERVVMFDRCLVATGAS 149 (467)
T ss_dssp HTTCTTEEEEEE-EEEEEE--TTEEEEEETTSS-------------EEEEECSEEEECCCEE
T ss_pred HhccCCeEEEEE-EEEEcc--CCEEEEEeCCCc-------------eEEEEeCEEEEeCCCC
Confidence 4456 8998876 355443 457788887661 1279999999999963
No 263
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=68.19 E-value=5.4 Score=33.86 Aligned_cols=59 Identities=12% Similarity=0.099 Sum_probs=40.9
Q ss_pred HHHHHHHHHCCcEEEcCceeEEEEEeCCeE-EEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch-HHHHHh
Q 023079 48 LSLVGEAENHGTTFSNNTSVIGGHLEGNCM-NVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP-ALAKRF 122 (287)
Q Consensus 48 ~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~-~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~-~l~~~~ 122 (287)
..+.+.+++.|+.++++ .+..+..+++.+ .|++.+|. ++.++.+|+++|...+ .+++.+
T Consensus 184 ~~~~~~l~~~g~~~~~~-~v~~~~~~~~~~~~v~~~~g~---------------~i~~~~~vi~~g~~~~~~~~~~~ 244 (304)
T 4fk1_A 184 QTIMDELSNKNIPVITE-SIRTLQGEGGYLKKVEFHSGL---------------RIERAGGFIVPTFFRPNQFIEQL 244 (304)
T ss_dssp HHHHHHHHTTTCCEECS-CEEEEESGGGCCCEEEETTSC---------------EECCCEEEECCEEECSSCHHHHT
T ss_pred hhhhhhhhccceeEeee-eEEEeecCCCeeeeeeccccc---------------eeeecceeeeeccccCChhhhhc
Confidence 44566678889999876 466776665555 48888883 7889999888875433 345555
No 264
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=68.05 E-value=15 Score=33.59 Aligned_cols=44 Identities=9% Similarity=0.163 Sum_probs=31.3
Q ss_pred HHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 54 AENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 54 a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
.++.|++++.+... ....+.+.|.+.+|. .++++|+||+|+|..
T Consensus 118 ~~~~~v~~~~g~a~---~~~~~~v~v~~~~g~--------------~~~~~d~lviATGs~ 161 (483)
T 3dgh_A 118 LRDKKVEYINGLGS---FVDSHTLLAKLKSGE--------------RTITAQTFVIAVGGR 161 (483)
T ss_dssp HHHTTCEEECSEEE---EEETTEEEEECTTCC--------------EEEEEEEEEECCCEE
T ss_pred HHhCCCEEEEeEEE---EccCCEEEEEeCCCe--------------EEEEcCEEEEeCCCC
Confidence 45679999876432 223457788887762 369999999999963
No 265
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=67.38 E-value=11 Score=34.54 Aligned_cols=45 Identities=11% Similarity=0.064 Sum_probs=30.9
Q ss_pred HHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 53 EAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 53 ~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
.+++.|++++.+. +.. ...+.+.|.+.+|. ..++++|+||+|+|.
T Consensus 113 ~~~~~~V~~i~g~-~~~--~~~~~v~v~~~~g~-------------~~~~~~d~lViATGs 157 (488)
T 3dgz_A 113 QLQDRKVKYFNIK-ASF--VDEHTVRGVDKGGK-------------ATLLSAEHIVIATGG 157 (488)
T ss_dssp HHHHTTCEEECCE-EEE--SSSSEEEEECTTSC-------------EEEEEEEEEEECCCE
T ss_pred HHHhCCCEEEEEE-EEE--ccCCeEEEEeCCCc-------------eEEEECCEEEEcCCC
Confidence 3556799987653 322 23456778776662 237999999999996
No 266
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=66.83 E-value=11 Score=34.73 Aligned_cols=48 Identities=19% Similarity=0.081 Sum_probs=31.1
Q ss_pred HHHHHC-CcEEEcCceeEEEEEeCCeEEEEe---cCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 52 GEAENH-GTTFSNNTSVIGGHLEGNCMNVYI---SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 52 ~~a~~~-Gv~~~~~~~V~~i~~~~~~~~V~t---~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
..++++ |++++.++ ++.+. .+.+.|.+ .+|.. ..++++|++|+|+|..
T Consensus 111 ~~l~~~~gv~~~~g~-~~~i~--~~~v~v~~~~~~~g~~------------~~~~~~d~lviAtGs~ 162 (490)
T 1fec_A 111 GMFADTEGLTFHQGF-GALQD--NHTVLVRESADPNSAV------------LETLDTEYILLATGSW 162 (490)
T ss_dssp HHHHTSTTEEEEESE-EEEEE--TTEEEEESSSSTTSCE------------EEEEEEEEEEECCCEE
T ss_pred HHHhcCCCcEEEEeE-EEEee--CCEEEEEeeccCCCCc------------eEEEEcCEEEEeCCCC
Confidence 345677 99999875 55443 35566654 23400 0279999999999964
No 267
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=65.79 E-value=11 Score=34.44 Aligned_cols=59 Identities=12% Similarity=-0.015 Sum_probs=34.2
Q ss_pred CCcEEEcCceeEEEEEeC-C-eE-EEEecCCc----ccccCCCCCCCCCceeEecCEEEEcCCCCchH
Q 023079 57 HGTTFSNNTSVIGGHLEG-N-CM-NVYISESK----NLRNWDGVSPLQPELTLIPKLVVNSAGLSAPA 117 (287)
Q Consensus 57 ~Gv~~~~~~~V~~i~~~~-~-~~-~V~t~~g~----~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~~ 117 (287)
+|++|++++.++.+..++ + .+ .|++.+.. .+. ......++..++.||.||.|+|.-...
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~--~~~~~~g~~~~i~~d~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEA--TRAVPTGDVEDLPCGLVLSSIGYKSRP 335 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGG--CEEEEEEEEEEEECSEEEECCCEECCC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCC--CcccCCCceEEEEcCEEEECCCCCCCC
Confidence 899999999999987653 3 33 23332100 000 000000112379999999999976655
No 268
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=65.64 E-value=1.8 Score=40.31 Aligned_cols=76 Identities=12% Similarity=0.106 Sum_probs=40.9
Q ss_pred eeecHHHHHHHHHHHH--HHCCcEEEcCceeEEEEEeCCeEEEEecCCccc--ccC-CCCCCCCCceeEecCEEEEcCCC
Q 023079 39 GIVDSHSLMLSLVGEA--ENHGTTFSNNTSVIGGHLEGNCMNVYISESKNL--RNW-DGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 39 g~vdp~~l~~~l~~~a--~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~--~~~-~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
|.+++..++..+...+ .+.+++|+. .+|++|+.+...+.+...++... ... ......+...++..|++|+|+|+
T Consensus 89 G~l~~~~i~~p~~~~~~~~~~~v~~~~-~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs 167 (502)
T 4g6h_A 89 GTVDEKSIIEPIVNFALKKKGNVTYYE-AEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGA 167 (502)
T ss_dssp TSSCGGGGEEEHHHHHTTCSSCEEEEE-EEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCC
T ss_pred ccccHHHhhhhHHHHHHhhcCCeEEEE-EEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCc
Confidence 4444444332233222 345788875 58999988877776543111000 000 00011223358999999999998
Q ss_pred Cc
Q 023079 114 SA 115 (287)
Q Consensus 114 ~s 115 (287)
-.
T Consensus 168 ~~ 169 (502)
T 4g6h_A 168 EP 169 (502)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 269
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=65.02 E-value=6 Score=37.01 Aligned_cols=44 Identities=14% Similarity=0.011 Sum_probs=29.9
Q ss_pred CCcEEE--cCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc-hHHHH
Q 023079 57 HGTTFS--NNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA-PALAK 120 (287)
Q Consensus 57 ~Gv~~~--~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s-~~l~~ 120 (287)
.+|++. .++.|.++.. ++ |.+++. ++.+|.||.|||..+ ..++.
T Consensus 351 ~~v~lv~~~~~~i~~i~~--~g--v~~~d~----------------~~~~D~ii~atG~~~~~~~~~ 397 (542)
T 1w4x_A 351 DNVHLVDTLSAPIETITP--RG--VRTSER----------------EYELDSLVLATGFDALTGALF 397 (542)
T ss_dssp TTEEEEETTTSCEEEECS--SE--EEESSC----------------EEECSEEEECCCCCCTTHHHH
T ss_pred CCEEEEecCCCCceEEcC--Ce--EEeCCe----------------EEecCEEEEcCCccccccCcC
Confidence 356665 2456766642 33 556653 899999999999998 45554
No 270
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=64.97 E-value=9.1 Score=38.66 Aligned_cols=59 Identities=10% Similarity=0.208 Sum_probs=40.5
Q ss_pred HHHHHHCCcEEEcCceeEEEEEe-CCeE-EEEecC-------CcccccCCCCCCCCCceeEecCEEEEcCCCCch-HHHH
Q 023079 51 VGEAENHGTTFSNNTSVIGGHLE-GNCM-NVYISE-------SKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP-ALAK 120 (287)
Q Consensus 51 ~~~a~~~Gv~~~~~~~V~~i~~~-~~~~-~V~t~~-------g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~-~l~~ 120 (287)
.+.+++.|++|++++.|+++..+ ++++ .|+..+ |. ..++.+|.||+|+|.-.+ ++++
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~-------------~~~i~~D~Vv~a~G~~P~~~l~~ 389 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGG-------------TQRFEADVLAVAGGFNPVVHLHS 389 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEE-------------EEEEECSEEEEECCEEECCHHHH
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCc-------------eEEEEcCEEEECCCcCcChHHHH
Confidence 45677889999999999999874 3433 344332 31 137999999999996543 3554
Q ss_pred Hh
Q 023079 121 RF 122 (287)
Q Consensus 121 ~~ 122 (287)
..
T Consensus 390 ~~ 391 (965)
T 2gag_A 390 QR 391 (965)
T ss_dssp HT
T ss_pred hC
Confidence 44
No 271
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=64.61 E-value=11 Score=34.45 Aligned_cols=46 Identities=4% Similarity=-0.061 Sum_probs=29.7
Q ss_pred HHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 50 LVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 50 l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
+...+++.|++++.++ +..+ ..+.+.|+++.. ++++|+||+|+|..
T Consensus 114 ~~~~~~~~gv~~~~g~-~~~~--~~~~~~v~~~g~----------------~~~~d~lviAtG~~ 159 (478)
T 3dk9_A 114 YQNNLTKSHIEIIRGH-AAFT--SDPKPTIEVSGK----------------KYTAPHILIATGGM 159 (478)
T ss_dssp HHHHHHHTTCEEEESC-EEEC--SCSSCEEEETTE----------------EEECSCEEECCCEE
T ss_pred HHHHHHhCCcEEEEeE-EEEe--eCCeEEEEECCE----------------EEEeeEEEEccCCC
Confidence 3344567799998764 3222 223356664332 79999999999963
No 272
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=64.37 E-value=7.1 Score=35.73 Aligned_cols=66 Identities=21% Similarity=0.112 Sum_probs=37.7
Q ss_pred HHHHHHHHH------CCcEEEcCceeEEEEEeCCeE-EEEecC------CcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 48 LSLVGEAEN------HGTTFSNNTSVIGGHLEGNCM-NVYISE------SKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 48 ~~l~~~a~~------~Gv~~~~~~~V~~i~~~~~~~-~V~t~~------g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
..|.+.+++ +|++|++++.+..+..++ .+ .|++.+ +. +..| ....++..++.||.||.|+|.-
T Consensus 250 ~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~-~v~~v~~~~~~~~~~~~-~~~~--~~~~g~~~~i~~d~vi~a~G~~ 325 (456)
T 1lqt_A 250 KVLRGYADREPRPGHRRMVFRFLTSPIEIKGKR-KVERIVLGRNELVSDGS-GRVA--AKDTGEREELPAQLVVRSVGYR 325 (456)
T ss_dssp HHHHHHHTCC-CTTSEEEEEECSEEEEEEECSS-SCCEEEEEEEEEEECSS-SSEE--EEEEEEEEEEECSEEEECSCEE
T ss_pred HHHHHHhhcCCCCCCceEEEEeCCCCeEEecCC-cEeEEEEEEEEecCCCc-cccc--ccCCCceEEEEcCEEEEccccc
Confidence 444455555 799999999999887553 32 133221 00 0000 0000112379999999999976
Q ss_pred chH
Q 023079 115 APA 117 (287)
Q Consensus 115 s~~ 117 (287)
...
T Consensus 326 p~~ 328 (456)
T 1lqt_A 326 GVP 328 (456)
T ss_dssp CCC
T ss_pred cCC
Confidence 655
No 273
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=62.96 E-value=1.6 Score=40.10 Aligned_cols=50 Identities=16% Similarity=0.133 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 43 SHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 43 p~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
|..++..+.+.+++.|++|+.++.|. . .|+++++ .+.+|.||+|+|++.+
T Consensus 171 ~~~~~~~~~~~l~~~gv~~~~~~~v~------~--~v~~~~~----------------~~~~d~vvlAtG~~~~ 220 (456)
T 2vdc_G 171 EKSVVERRVKLLADAGVIYHPNFEVG------R--DASLPEL----------------RRKHVAVLVATGVYKA 220 (456)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTCCBT------T--TBCHHHH----------------HSSCSEEEECCCCCEE
T ss_pred CHHHHHHHHHHHHHCCcEEEeCCEec------c--EEEhhHh----------------HhhCCEEEEecCCCCC
Confidence 34566677777888999999998763 1 1333334 5679999999999854
No 274
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=61.18 E-value=23 Score=33.14 Aligned_cols=49 Identities=14% Similarity=0.173 Sum_probs=30.2
Q ss_pred HHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 52 GEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 52 ~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
..++++|++++.+... + ...+.+.|...... +...+++++++|+|||..
T Consensus 148 ~~l~~~~V~~i~G~a~--f-~~~~~v~V~~~~~~-----------~~~~~i~a~~iiIATGs~ 196 (542)
T 4b1b_A 148 TGLRSSKVKYINGLAK--L-KDKNTVSYYLKGDL-----------SKEETVTGKYILIATGCR 196 (542)
T ss_dssp HHHHHTTCEEECEEEE--E-EETTEEEEEEC--C-----------CCEEEEEEEEEEECCCEE
T ss_pred HHHHhCCCEEEeeeEE--E-cCCCcceEeecccC-----------CceEEEeeeeEEeccCCC
Confidence 3456789998865322 2 33456666544311 012479999999999974
No 275
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=59.44 E-value=15 Score=37.16 Aligned_cols=68 Identities=21% Similarity=0.159 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHC-CcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCC----CCCceeEecCEEEEcCCCC
Q 023079 43 SHSLMLSLVGEAENH-GTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSP----LQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 43 p~~l~~~l~~~a~~~-Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~----~~~~~~i~a~~VV~aaG~~ 114 (287)
+..+...+.+.+.+. +++++.+++|.++...+....+..... .|..... .+...++++|+||+|+|+.
T Consensus 180 ~~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~----~~~v~~~~~~~~~~~~~i~~d~lVlATGs~ 252 (965)
T 2gag_A 180 SSAWIEQVTSELAEAEETTHLQRTTVFGSYDANYLIAAQRRTV----HLDGPSGPGVSRERIWHIRAKQVVLATGAH 252 (965)
T ss_dssp HHHHHHHHHHHHHHSTTEEEESSEEEEEEETTTEEEEEEECST----TCSSCCCTTCCSEEEEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHhhcCCcEEEeCCEEEeeecCCceeeeEeecc----cccccccccCCCCceEEEECCEEEECCCCc
Confidence 566777777777775 999999999988865432222221111 0000000 0111369999999999985
No 276
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=58.89 E-value=4.6 Score=37.02 Aligned_cols=59 Identities=19% Similarity=0.213 Sum_probs=36.1
Q ss_pred HHHHHCCcEEEcCceeEEEEEeCCeEE-EEe---------cCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 52 GEAENHGTTFSNNTSVIGGHLEGNCMN-VYI---------SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 52 ~~a~~~Gv~~~~~~~V~~i~~~~~~~~-V~t---------~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
+.+++.|++|++++.++.+..+ +.+. |++ .+|. |+.+...+.+.++.||.||+|+|...
T Consensus 310 ~~~~~~Gv~~~~~~~~~~i~~~-g~v~~v~~~~~~~~~~d~~G~----~~~~~~~g~~~~i~aD~Vi~A~G~~p 378 (456)
T 2vdc_G 310 AHAEEEGVEFIWQAAPEGFTGD-TVVTGVRAVRIHLGVADATGR----QTPQVIEGSEFTVQADLVIKALGFEP 378 (456)
T ss_dssp HHHHHTTCEEECCSSSCCEEEE-EEEETTEEEEEEEEEEEECTT----CCEEEEEEEEEEEECSEEEECSCEEC
T ss_pred HHHHHCCCEEEeCCCceEEeCC-CcEEEEEEEEEEecccCCcCC----ccccccCCcEEEEECCEEEECCCCCC
Confidence 4577889999999998888653 2221 111 1221 11111122235799999999999855
No 277
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=57.61 E-value=18 Score=32.86 Aligned_cols=43 Identities=19% Similarity=0.148 Sum_probs=28.9
Q ss_pred HHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 51 VGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 51 ~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
...++++|++++.++ +..+. .. .|++ +|. ++++|+||+|+|.+
T Consensus 99 ~~~~~~~gv~~~~g~-~~~i~--~~--~v~~-~g~---------------~~~~d~lviAtGs~ 141 (463)
T 2r9z_A 99 DGYVERLGITRVDGH-ARFVD--AH--TIEV-EGQ---------------RLSADHIVIATGGR 141 (463)
T ss_dssp HHHHHHTTCEEEESC-EEEEE--TT--EEEE-TTE---------------EEEEEEEEECCCEE
T ss_pred HHHHHHCCCEEEEeE-EEEcc--CC--EEEE-CCE---------------EEEcCEEEECCCCC
Confidence 344567899998875 33332 23 3444 451 79999999999975
No 278
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=57.14 E-value=8.9 Score=35.36 Aligned_cols=48 Identities=8% Similarity=-0.065 Sum_probs=24.5
Q ss_pred HHHHHHHCCcEEEcCceeEEEEEeCCeEEEEe-----------cCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 50 LVGEAENHGTTFSNNTSVIGGHLEGNCMNVYI-----------SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 50 l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t-----------~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
+...+++.|++++.++.+ .+. .+.+.|.. .++ .++++|+||+|+|...
T Consensus 95 ~~~~~~~~gv~~~~g~~~-~id--~~~v~v~~~~~~~~~~~~~~~~---------------~~~~~d~lViAtGs~p 153 (500)
T 1onf_A 95 YRQNLSKDKVDLYEGTAS-FLS--ENRILIKGTKDNNNKDNGPLNE---------------EILEGRNILIAVGNKP 153 (500)
T ss_dssp HHHHHHHTTCEEEESCCC-CC-------------------------------------------CBSSEEECCCCCB
T ss_pred HHHHHHhCCCEEEEeEEE-Eee--CCEEEEEeccccccccccCCCc---------------eEEEeCEEEECCCCCC
Confidence 334456789999887543 332 23444432 112 2699999999999753
No 279
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=55.99 E-value=12 Score=34.37 Aligned_cols=44 Identities=14% Similarity=0.002 Sum_probs=28.5
Q ss_pred HHHHC-CcEEEcCceeEEEEEeCCeEEEEec-C-----CcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 53 EAENH-GTTFSNNTSVIGGHLEGNCMNVYIS-E-----SKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 53 ~a~~~-Gv~~~~~~~V~~i~~~~~~~~V~t~-~-----g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
.++++ |++++.++ ++.+ +...+.+... + + .++++|+||+|+|..
T Consensus 116 ~l~~~~gv~~~~g~-~~~i--~~~~v~v~~~~~~~~~~~---------------~~~~~d~lViATGs~ 166 (495)
T 2wpf_A 116 MFNDTEGLDFFLGW-GSLE--SKNVVVVRETADPKSAVK---------------ERLQADHILLATGSW 166 (495)
T ss_dssp HHHHCTTEEEEESE-EEEE--ETTEEEEESSSSTTSCEE---------------EEEEEEEEEECCCEE
T ss_pred HHhcCCCeEEEEeE-EEEe--eCCEEEEeecCCccCCCC---------------eEEEcCEEEEeCCCC
Confidence 44677 99998875 5444 2334444321 2 3 279999999999974
No 280
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=53.53 E-value=3.3 Score=37.04 Aligned_cols=50 Identities=14% Similarity=0.123 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch-HHHHHh
Q 023079 45 SLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP-ALAKRF 122 (287)
Q Consensus 45 ~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~-~l~~~~ 122 (287)
.+...+.+.++++|++++.+++|.++ | + ++.+|.||+|+|...+ .+++.+
T Consensus 189 ~~~~~~~~~l~~~gV~~~~~~~v~~i-------------g---~------------~~~~D~vv~a~G~~p~~~~~~~~ 239 (385)
T 3klj_A 189 DGGLFLKDKLDRLGIKIYTNSNFEEM-------------G---D------------LIRSSCVITAVGVKPNLDFIKDT 239 (385)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCGGGC-------------H---H------------HHHHSEEEECCCEEECCGGGTTS
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEc-------------C---e------------EEecCeEEECcCcccChhhhhhc
Confidence 45566667778889999998888766 3 1 7899999999998655 344433
No 281
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=47.32 E-value=36 Score=30.68 Aligned_cols=41 Identities=5% Similarity=0.013 Sum_probs=27.8
Q ss_pred HHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 53 EAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 53 ~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
.+++.|++++.++. +.+. ... |++ +|. ++++|++|+|+|..
T Consensus 102 ~~~~~~v~~~~g~~-~~i~--~~~--v~~-~g~---------------~~~~d~lviAtGs~ 142 (450)
T 1ges_A 102 VLGKNNVDVIKGFA-RFVD--AKT--LEV-NGE---------------TITADHILIATGGR 142 (450)
T ss_dssp HHHHTTCEEEESCC-EEEE--TTE--EEE-TTE---------------EEEEEEEEECCCEE
T ss_pred HHHhCCCEEEEeEE-EEec--CCE--EEE-CCE---------------EEEeCEEEECCCCC
Confidence 34678999988753 3442 233 444 451 79999999999963
No 282
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=47.09 E-value=44 Score=31.32 Aligned_cols=45 Identities=11% Similarity=0.027 Sum_probs=29.1
Q ss_pred HHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 54 AENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 54 a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
+.+.|++++.+. +..+ ....+.|.+.+|. ..++++|+||+|+|+.
T Consensus 216 ~~~~~V~~~~~~-~~~~--~~~~v~v~~~~g~-------------~~~~~~d~lviAtGs~ 260 (598)
T 2x8g_A 216 LRDNQVTYLNAK-GRLI--SPHEVQITDKNQK-------------VSTITGNKIILATGER 260 (598)
T ss_dssp HHHTTCEEECSE-EEEE--ETTEEEEECTTCC-------------EEEEEEEEEEECCCEE
T ss_pred HhhCCcEEEEEE-EEEc--CCCEEEEEeCCCC-------------eEEEEeCEEEEeCCCC
Confidence 456789988653 3323 2345666665551 1369999999999963
No 283
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=45.19 E-value=7.4 Score=35.11 Aligned_cols=53 Identities=25% Similarity=0.172 Sum_probs=37.3
Q ss_pred ceeecHHHHHHHHHHHHHHCCcEEEcCc-eeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch
Q 023079 38 SGIVDSHSLMLSLVGEAENHGTTFSNNT-SVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP 116 (287)
Q Consensus 38 ~g~vdp~~l~~~l~~~a~~~Gv~~~~~~-~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~ 116 (287)
...++...+...|.+.+++.|++++... .+.++. . ...++|.||+|+|.++.
T Consensus 116 ~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~------------~---------------~~~~ad~VV~AdG~~S~ 168 (430)
T 3ihm_A 116 SRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLE------------G---------------LSEQYDLLVVCTGKYAL 168 (430)
T ss_dssp EBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHH------------H---------------HHTTSSEEEECCCCTTG
T ss_pred ceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhh------------h---------------hcccCCEEEECCCCcch
Confidence 3567899999999999999999987532 011110 0 12369999999999874
Q ss_pred H
Q 023079 117 A 117 (287)
Q Consensus 117 ~ 117 (287)
.
T Consensus 169 ~ 169 (430)
T 3ihm_A 169 G 169 (430)
T ss_dssp G
T ss_pred H
Confidence 3
No 284
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=43.86 E-value=3.6 Score=37.78 Aligned_cols=48 Identities=21% Similarity=0.146 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
..+...+.+.+++.|++|+.++.|. .. |++++. ++.+|+||+|+|+..
T Consensus 59 ~~~~~~~~~~~~~~gv~~~~~~~v~------~~--V~~~~~----------------~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 59 KNVINTFTQTARSDRCAFYGNVEVG------RD--VTVQEL----------------QDAYHAVVLSYGAED 106 (460)
T ss_dssp GGHHHHHHHHHTSTTEEEEBSCCBT------TT--BCHHHH----------------HHHSSEEEECCCCCE
T ss_pred HHHHHHHHHHHHhCCcEEEeeeEEe------eE--EEeccc----------------eEEcCEEEEecCcCC
Confidence 3456666777788899999887762 11 333333 578999999999984
No 285
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=42.16 E-value=3.3 Score=38.01 Aligned_cols=48 Identities=23% Similarity=0.199 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
..+...+.+.+++.|++|+.+..| +.. |+++++ ++++|+||+|+|++.
T Consensus 61 ~~~~~~~~~~~~~~~v~~~~~v~v------~~~--v~~~~~----------------~~~~d~lViAtG~~~ 108 (456)
T 1lqt_A 61 KSISKQFEKTAEDPRFRFFGNVVV------GEH--VQPGEL----------------SERYDAVIYAVGAQS 108 (456)
T ss_dssp GGGHHHHHHHHTSTTEEEEESCCB------TTT--BCHHHH----------------HHHSSEEEECCCCCE
T ss_pred HHHHHHHHHHHhcCCCEEEeeEEE------CCE--EEECCC----------------eEeCCEEEEeeCCCC
Confidence 345666666777889999887543 222 444555 689999999999974
No 286
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=41.46 E-value=41 Score=30.61 Aligned_cols=47 Identities=6% Similarity=0.063 Sum_probs=30.4
Q ss_pred HHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEec-CCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 49 SLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYIS-ESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 49 ~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~-~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
.+...+++.|++++.+ .+..+. ... |++. ++. .+++|++|+|+|...
T Consensus 119 ~~~~~~~~~~v~~~~g-~~~~i~--~~~--v~v~~~~~---------------~~~~d~lviAtG~~p 166 (484)
T 3o0h_A 119 LYREGLQNSNVHIYES-RAVFVD--EHT--LELSVTGE---------------RISAEKILIATGAKI 166 (484)
T ss_dssp HHHHHHHHTTCEEEES-CEEEEE--TTE--EEETTTCC---------------EEEEEEEEECCCEEE
T ss_pred HHHHHHHhCCCEEEEe-EEEEee--CCE--EEEecCCe---------------EEEeCEEEEccCCCc
Confidence 3444566789999876 444442 233 4443 441 799999999999754
No 287
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=40.66 E-value=32 Score=31.06 Aligned_cols=45 Identities=13% Similarity=0.072 Sum_probs=28.8
Q ss_pred HHHHHHHCCcEEEcCceeEEEEEeCCeEEEEe-cCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 50 LVGEAENHGTTFSNNTSVIGGHLEGNCMNVYI-SESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 50 l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t-~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
+...+++.|++++.+ ++..+ +. ..|.+ .++ ..+++|++|+|+|..
T Consensus 99 ~~~~~~~~gv~~~~g-~~~~i--~~--~~v~~~~~~---------------~~~~~d~lviAtG~~ 144 (463)
T 4dna_A 99 YRKGLANAGAEILDT-RAELA--GP--NTVKLLASG---------------KTVTAERIVIAVGGH 144 (463)
T ss_dssp HHHHHHHHTCEEEES-CEEES--SS--SEEEETTTT---------------EEEEEEEEEECCCEE
T ss_pred HHHHHHhCCCEEEEE-EEEEe--eC--CEEEEecCC---------------eEEEeCEEEEecCCC
Confidence 334456679999876 34333 12 24444 344 179999999999974
No 288
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=40.06 E-value=27 Score=32.30 Aligned_cols=39 Identities=15% Similarity=0.072 Sum_probs=28.1
Q ss_pred HHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCC
Q 023079 55 ENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGL 113 (287)
Q Consensus 55 ~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~ 113 (287)
++.|++++.+.+|+.+.. + .|.+. +. .+++|+||+|+|.
T Consensus 146 ~~~gv~~~~~~~v~~i~~--~--~v~~~-g~---------------~~~~d~lViATGs 184 (523)
T 1mo9_A 146 EQLNLEYILNCPAKVIDN--H--TVEAA-GK---------------VFKAKNLILAVGA 184 (523)
T ss_dssp HTSCCCEEESSCCEEEET--T--EEEET-TE---------------EEEBSCEEECCCE
T ss_pred ccCCcEEEEeeEEEEeeC--C--EEEEC-CE---------------EEEeCEEEECCCC
Confidence 667999985567776642 3 34444 41 7999999999996
No 289
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=36.67 E-value=20 Score=30.41 Aligned_cols=45 Identities=9% Similarity=0.048 Sum_probs=29.5
Q ss_pred HCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCch-HHHH
Q 023079 56 NHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSAP-ALAK 120 (287)
Q Consensus 56 ~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s~-~l~~ 120 (287)
+.|. +..+..+.++.. + .|++.+|. ++.+|.||+|+|.-.+ .+++
T Consensus 246 ~~g~-i~~~~~v~~~~~--~--~v~~~~g~---------------~i~~D~vi~a~G~~p~~~~l~ 291 (357)
T 4a9w_A 246 ARGV-LAAVPPPARFSP--T--GMQWADGT---------------ERAFDAVIWCTGFRPALSHLK 291 (357)
T ss_dssp HTTC-CCEECCCSEEET--T--EEECTTSC---------------EEECSEEEECCCBCCCCGGGT
T ss_pred hcCc-eEEecCcceEeC--C--eeEECCCC---------------EecCCEEEECCCcCCCCcccC
Confidence 4454 444556665542 2 36777773 7999999999998665 4443
No 290
>2jna_A Putative secreted protein; GFT-homodimer, PSI-2, alpha+beta, putative secreted Pro structural genomics, protein structure initiative; NMR {Salmonella typhimurium} SCOP: d.230.6.1
Probab=36.32 E-value=87 Score=22.36 Aligned_cols=64 Identities=16% Similarity=0.137 Sum_probs=41.3
Q ss_pred eeeeCHHHHHhhCCCcccceeEEcCC--ceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEE
Q 023079 12 LRMLEGFEAMKMEPELQCVKALLSPA--SGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVY 80 (287)
Q Consensus 12 ~~~L~~~ei~~~~P~l~~~~al~~p~--~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~ 80 (287)
.+.+++++... -.+...|-+.... +..-.|..+...|.+.|.+.|+..+ .|++....++.|.++
T Consensus 22 A~eI~~~qa~~--~~lq~iG~ISvs~~~~~~~s~~da~~~La~kAd~~GA~yY---~Iis~~~~~~~~~~t 87 (104)
T 2jna_A 22 AEQVSKQEISH--FKLVKVGTINVSQSGGQISSPSDLREKLSELADAKGGKYY---HIIAAREHGPNFEAV 87 (104)
T ss_dssp CCCCCHHHHHH--HTCEEEEEEEEEEESSSCCSHHHHHHHHHHHHHHHTCSEE---EEEEEEEETTEEEEE
T ss_pred HHHhcHHHhhh--ccCceeeEEEEecccCCCCCHHHHHHHHHHHHHHcCCCEE---EEEEEEcCCCeEEEE
Confidence 35667777763 1233334343322 1136899999999999999999875 467766546777654
No 291
>2r4q_A Phosphotransferase system (PTS) fructose-specific iiabc component; fructose specific IIB subunit, PF structural genomics, PSI-2; HET: MSE; 1.60A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=34.51 E-value=21 Score=25.72 Aligned_cols=57 Identities=12% Similarity=0.141 Sum_probs=36.6
Q ss_pred CceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeC-CeEE-EEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 37 ASGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEG-NCMN-VYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 37 ~~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~-~~~~-V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
-.|..+.+....+|.++|++.|.++. ++..| .++. .-|... .-.||.||+|+..-
T Consensus 12 ptGiAhTymAaeaL~~aA~~~G~~ik-------VEtqGs~G~~n~Lt~~~----------------I~~Ad~VIiA~d~~ 68 (106)
T 2r4q_A 12 PTGIAHTFMAADALKEKAKELGVEIK-------VETNGSSGIKHKLTAQE----------------IEDAPAIIVAADKQ 68 (106)
T ss_dssp SCC--CHHHHHHHHHHHHHHHTCCEE-------EEEEETTEEESCCCHHH----------------HHHCSCEEEEESSC
T ss_pred CCcHHHHHHHHHHHHHHHHHCCCeEE-------EEecCCCCccCCCCHHH----------------HHhCCEEEEEeCCc
Confidence 35699999999999999999998875 33332 2322 122222 45799999997754
Q ss_pred ch
Q 023079 115 AP 116 (287)
Q Consensus 115 s~ 116 (287)
..
T Consensus 69 v~ 70 (106)
T 2r4q_A 69 VE 70 (106)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 292
>2r48_A Phosphotransferase system (PTS) mannose-specific iibca component; PTS system, fructose specific IIB PFAM02379, PSI-2, MCSG; 1.80A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=34.03 E-value=22 Score=25.67 Aligned_cols=56 Identities=16% Similarity=0.145 Sum_probs=37.9
Q ss_pred ceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeC-CeEE-EEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 38 SGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEG-NCMN-VYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 38 ~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~-~~~~-V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
.|..+.+....+|.++|++.|.++. ++..| .++. .-|... .-.||.||+|+..-.
T Consensus 13 tGiAhTymAaeaL~~aA~~~G~~ik-------VEtqGs~G~~n~Lt~~~----------------I~~Ad~VIiA~d~~v 69 (106)
T 2r48_A 13 NGIAHTYMAAENLQKAADRLGVSIK-------VETQGGIGVENKLTEEE----------------IREADAIIIAADRSV 69 (106)
T ss_dssp SCSHHHHHHHHHHHHHHHHHTCEEE-------EEEEETTEEESCCCHHH----------------HHHCSEEEEEESSCC
T ss_pred CcHHHHHHHHHHHHHHHHHCCCeEE-------EEecCCCCccCCCCHHH----------------HHhCCEEEEEeCCcc
Confidence 5688999999999999999999885 33332 2322 122222 457999999987544
Q ss_pred h
Q 023079 116 P 116 (287)
Q Consensus 116 ~ 116 (287)
.
T Consensus 70 ~ 70 (106)
T 2r48_A 70 N 70 (106)
T ss_dssp C
T ss_pred C
Confidence 3
No 293
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=33.87 E-value=33 Score=31.10 Aligned_cols=16 Identities=6% Similarity=0.021 Sum_probs=13.8
Q ss_pred eEecCEEEEcCCCCch
Q 023079 101 TLIPKLVVNSAGLSAP 116 (287)
Q Consensus 101 ~i~a~~VV~aaG~~s~ 116 (287)
++.+|.||+|+|.-.+
T Consensus 262 ~i~~D~Vi~atG~~p~ 277 (464)
T 2xve_A 262 SEKVDAIILCTGYIHH 277 (464)
T ss_dssp EEECSEEEECCCBCCC
T ss_pred EEeCCEEEECCCCCCC
Confidence 7899999999997644
No 294
>2kyr_A Fructose-like phosphotransferase enzyme IIB compo; ALP protein, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=31.89 E-value=18 Score=26.34 Aligned_cols=55 Identities=11% Similarity=0.198 Sum_probs=37.3
Q ss_pred ceeecHHHHHHHHHHHHHHCCcEEEcCceeEEEEEeC-CeEE-EEecCCcccccCCCCCCCCCceeEecCEEEEcCCCCc
Q 023079 38 SGIVDSHSLMLSLVGEAENHGTTFSNNTSVIGGHLEG-NCMN-VYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLSA 115 (287)
Q Consensus 38 ~g~vdp~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~-~~~~-V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~s 115 (287)
.|..+.+....+|.++|++.|.++. ++..| .++. .-|... .-.||.||+|+..-.
T Consensus 16 tGiAHTyMAAeaL~~aA~~~G~~ik-------VEtqGs~G~~n~Lt~~~----------------I~~Ad~VIiA~d~~v 72 (111)
T 2kyr_A 16 MGLAHTFMAAQALEEAAVEAGYEVK-------IETQGADGIQNRLTAQD----------------IAEATIIIHSVAVTP 72 (111)
T ss_dssp SCHHHHHHHHHHHHHHHHHTSSEEE-------EEEEETTEEESCCCHHH----------------HHHCSEEEEEESSCC
T ss_pred CcHHHHHHHHHHHHHHHHHCCCeEE-------EEecCCCCcCCCCCHHH----------------HHhCCEEEEEeCCCc
Confidence 5688889999999999999999885 23322 2222 122222 457999999987544
No 295
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=28.56 E-value=9.1 Score=38.94 Aligned_cols=49 Identities=14% Similarity=0.067 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 44 HSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 44 ~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
..++....+.+++.|++|+.++.|.. . .|+++++. ++.+|.||+|+|++
T Consensus 238 ~~~~~~~~~~~~~~gv~~~~~~~v~~-----~--~v~~~~~~---------------~~~~d~vvlAtGa~ 286 (1025)
T 1gte_A 238 YDVVNFEIELMKDLGVKIICGKSLSE-----N--EITLNTLK---------------EEGYKAAFIGIGLP 286 (1025)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCBST-----T--SBCHHHHH---------------HTTCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHCCcEEEcccEecc-----c--eEEhhhcC---------------ccCCCEEEEecCCC
Confidence 34555566677888999999887731 1 13334441 47899999999996
No 296
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=27.62 E-value=47 Score=29.75 Aligned_cols=15 Identities=13% Similarity=-0.013 Sum_probs=12.7
Q ss_pred EecCEEEEcCCCCch
Q 023079 102 LIPKLVVNSAGLSAP 116 (287)
Q Consensus 102 i~a~~VV~aaG~~s~ 116 (287)
+.+|.||+|+|.-.+
T Consensus 279 ~~~D~vi~atG~~~~ 293 (447)
T 2gv8_A 279 SNIDRVIYCTGYLYS 293 (447)
T ss_dssp CCCSEEEECCCBCCC
T ss_pred ccCCEEEECCCCCcC
Confidence 789999999997544
No 297
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=27.29 E-value=55 Score=30.00 Aligned_cols=16 Identities=19% Similarity=0.214 Sum_probs=13.6
Q ss_pred eEecCEEEEcCCCCch
Q 023079 101 TLIPKLVVNSAGLSAP 116 (287)
Q Consensus 101 ~i~a~~VV~aaG~~s~ 116 (287)
++++|.||.|||--..
T Consensus 395 ~~~~D~VI~ATGy~~~ 410 (501)
T 4b63_A 395 TLEVDALMVATGYNRN 410 (501)
T ss_dssp EEEESEEEECCCEECC
T ss_pred EEECCEEEECcCCCCC
Confidence 7999999999997544
No 298
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=27.02 E-value=42 Score=32.08 Aligned_cols=41 Identities=17% Similarity=0.114 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHCCcEEEcCceeEEEEEeCCeEEEEecCCcccccCCCCCCCCCceeE-ecCEEEEcCCC
Q 023079 43 SHSLMLSLVGEAENHGTTFSNNTSVIGGHLEGNCMNVYISESKNLRNWDGVSPLQPELTL-IPKLVVNSAGL 113 (287)
Q Consensus 43 p~~l~~~l~~~a~~~Gv~~~~~~~V~~i~~~~~~~~V~t~~g~~~~~~~~~~~~~~~~~i-~a~~VV~aaG~ 113 (287)
...+...+.+.+++.|++++.++.|.. . .+ .+|+||+|+|.
T Consensus 424 ~~~~~~~~~~~~~~~gv~~~~~~~v~~--------------~----------------~~~~~d~lviAtG~ 465 (671)
T 1ps9_A 424 FYETLRYYRRMIEVTGVTLKLNHTVTA--------------D----------------QLQAFDETILASGI 465 (671)
T ss_dssp HHHHHHHHHHHHHHHTCEEEESCCCCS--------------S----------------SSCCSSEEEECCCE
T ss_pred HHHHHHHHHHHHHHcCCEEEeCcEecH--------------H----------------HhhcCCEEEEccCC
Confidence 345566677777888999988876521 1 34 79999999997
No 299
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=25.33 E-value=1.9e+02 Score=23.72 Aligned_cols=48 Identities=10% Similarity=-0.029 Sum_probs=30.5
Q ss_pred HHCCcEEEcCceeEEEEEeCCe---EEEEecCCcccccCCCCCCCCCceeEecCEEEEcCCCC
Q 023079 55 ENHGTTFSNNTSVIGGHLEGNC---MNVYISESKNLRNWDGVSPLQPELTLIPKLVVNSAGLS 114 (287)
Q Consensus 55 ~~~Gv~~~~~~~V~~i~~~~~~---~~V~t~~g~~~~~~~~~~~~~~~~~i~a~~VV~aaG~~ 114 (287)
...+..++..+.+..+...++. +.+..... +....+.+|.|++|.|.-
T Consensus 199 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------------~~~~~i~~d~vi~a~G~~ 249 (314)
T 4a5l_A 199 NHPKIEVIWNSELVELEGDGDLLNGAKIHNLVS------------GEYKVVPVAGLFYAIGHS 249 (314)
T ss_dssp TCTTEEEECSEEEEEEEESSSSEEEEEEEETTT------------CCEEEEECSEEEECSCEE
T ss_pred cccceeeEeeeeeEEEEeeeeccceeEEeeccc------------ccceeeccccceEecccc
Confidence 4457777777777777765443 23332221 112479999999999964
No 300
>2i9o_A MHB8A peptide; beta-hairpin, alpha-helix, de novo protein; NMR {Synthetic}
Probab=21.76 E-value=56 Score=17.79 Aligned_cols=29 Identities=21% Similarity=0.141 Sum_probs=21.3
Q ss_pred CCeEEEeCCCCchhhhhHHHHHHHHHHHh
Q 023079 258 PGLVNLFGIESPGLTSSMAIAEYVAAKFL 286 (287)
Q Consensus 258 ~~l~~~~G~~g~G~t~ap~~g~~va~~i~ 286 (287)
.|+.+-.|.+|.|-+.+.+.++-+++.+.
T Consensus 7 ngityeggggggggsaaeayakriaeama 35 (37)
T 2i9o_A 7 NGITYEGGGGGGGGSAAEAYAKRIAEAMA 35 (37)
T ss_dssp SSCCCCCSCCCCSCSSHHHHHHHHHHHHT
T ss_pred CCEEeecCCCCCcchHHHHHHHHHHHHHh
Confidence 45555556677778888899998888764
Done!