Query 023085
Match_columns 287
No_of_seqs 129 out of 1596
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 16:06:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023085.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023085hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 100.0 4.9E-29 1.7E-33 213.1 30.2 260 1-287 26-312 (322)
2 3dr2_A Exported gluconolactona 99.9 8E-25 2.7E-29 185.5 28.6 238 2-286 53-304 (305)
3 3sre_A PON1, serum paraoxonase 99.9 5.3E-25 1.8E-29 188.7 26.8 257 2-286 58-355 (355)
4 3e5z_A Putative gluconolactona 99.9 4.9E-23 1.7E-27 173.5 28.4 237 2-286 36-284 (296)
5 3g4e_A Regucalcin; six bladed 99.9 2.8E-22 9.5E-27 169.3 28.9 227 4-278 24-263 (297)
6 1pjx_A Dfpase, DIISOPROPYLFLUO 99.9 2.1E-22 7.3E-27 170.4 26.5 245 1-287 25-298 (314)
7 1rwi_B Serine/threonine-protei 99.9 3.9E-20 1.3E-24 153.1 24.0 224 1-287 31-263 (270)
8 2dg1_A DRP35, lactonase; beta 99.9 1.1E-19 3.8E-24 155.1 27.4 238 1-286 52-314 (333)
9 2p4o_A Hypothetical protein; p 99.9 2.9E-19 1E-23 151.4 29.3 217 1-278 39-279 (306)
10 2qc5_A Streptogramin B lactona 99.9 5.1E-19 1.8E-23 148.2 29.5 221 2-286 28-258 (300)
11 4hw6_A Hypothetical protein, I 99.9 1.3E-19 4.5E-24 160.6 26.8 229 4-287 152-432 (433)
12 2z2n_A Virginiamycin B lyase; 99.9 7.9E-19 2.7E-23 147.0 30.0 222 1-286 22-253 (299)
13 2qc5_A Streptogramin B lactona 99.9 4.9E-19 1.7E-23 148.3 28.3 219 2-286 70-298 (300)
14 1q7f_A NHL, brain tumor CG1071 99.9 7.7E-19 2.6E-23 146.8 28.5 224 1-287 37-279 (286)
15 2z2n_A Virginiamycin B lyase; 99.9 7.5E-19 2.6E-23 147.1 28.1 220 2-286 65-293 (299)
16 2ghs_A AGR_C_1268P; regucalcin 99.9 8.7E-19 3E-23 149.8 28.9 221 5-279 61-294 (326)
17 3tc9_A Hypothetical hydrolase; 99.8 1.6E-18 5.3E-23 153.6 26.2 229 4-287 149-429 (430)
18 4a2l_A BT_4663, two-component 99.8 5.7E-19 2E-23 168.0 25.0 223 2-286 365-612 (795)
19 3hrp_A Uncharacterized protein 99.8 2.1E-17 7.3E-22 145.5 30.4 229 1-287 138-409 (409)
20 3v9f_A Two-component system se 99.8 2.2E-18 7.6E-23 163.7 23.9 225 2-285 321-565 (781)
21 3v9f_A Two-component system se 99.8 6.3E-19 2.2E-23 167.4 19.4 220 2-286 371-609 (781)
22 3fvz_A Peptidyl-glycine alpha- 99.8 4E-18 1.4E-22 145.8 22.5 231 1-286 31-320 (329)
23 4a2l_A BT_4663, two-component 99.8 7.8E-18 2.7E-22 160.2 23.3 217 2-285 414-656 (795)
24 3v64_C Agrin; beta propeller, 99.8 3E-16 1E-20 135.3 27.5 220 3-285 43-272 (349)
25 2qe8_A Uncharacterized protein 99.8 5.9E-17 2E-21 139.4 22.7 229 1-281 24-314 (343)
26 3v65_B Low-density lipoprotein 99.8 4.2E-16 1.4E-20 136.2 26.9 220 3-285 86-315 (386)
27 1npe_A Nidogen, entactin; glyc 99.8 6.7E-16 2.3E-20 127.9 26.5 218 6-287 3-237 (267)
28 1ijq_A LDL receptor, low-densi 99.8 1.6E-15 5.6E-20 128.9 27.3 220 6-286 3-236 (316)
29 3dsm_A Uncharacterized protein 99.7 1.5E-15 5E-20 129.8 23.7 203 2-252 92-310 (328)
30 1rwi_B Serine/threonine-protei 99.7 1.4E-15 4.7E-20 125.6 22.8 192 33-287 25-221 (270)
31 3p5b_L Low density lipoprotein 99.7 3E-15 1E-19 131.4 25.4 220 5-285 84-317 (400)
32 1q7f_A NHL, brain tumor CG1071 99.7 2.3E-15 7.9E-20 125.6 23.6 197 33-286 31-236 (286)
33 3kya_A Putative phosphatase; s 99.7 5E-15 1.7E-19 131.7 26.4 226 4-287 151-474 (496)
34 3ott_A Two-component system se 99.7 5.7E-16 1.9E-20 146.7 21.6 221 2-286 332-584 (758)
35 3ott_A Two-component system se 99.7 1.3E-15 4.4E-20 144.3 22.4 213 2-278 381-618 (758)
36 3m0c_C LDL receptor, low-densi 99.7 1.1E-14 3.6E-19 137.4 26.9 220 5-285 396-629 (791)
37 3sov_A LRP-6, low-density lipo 99.7 1.8E-14 6.1E-19 122.5 25.8 221 3-286 3-236 (318)
38 3hxj_A Pyrrolo-quinoline quino 99.7 2.9E-14 9.9E-19 121.0 27.0 205 4-279 107-316 (330)
39 3dsm_A Uncharacterized protein 99.7 1.3E-14 4.5E-19 123.9 24.0 224 4-287 53-301 (328)
40 3v64_C Agrin; beta propeller, 99.7 1.4E-14 4.9E-19 124.8 22.3 172 3-199 83-264 (349)
41 3sov_A LRP-6, low-density lipo 99.7 4.2E-14 1.5E-18 120.2 23.5 171 4-199 46-227 (318)
42 3fvz_A Peptidyl-glycine alpha- 99.7 6.9E-15 2.4E-19 125.6 18.7 197 33-286 25-275 (329)
43 1npe_A Nidogen, entactin; glyc 99.6 4.9E-14 1.7E-18 116.6 22.5 190 4-252 47-247 (267)
44 3v65_B Low-density lipoprotein 99.6 5.2E-14 1.8E-18 122.9 22.3 191 3-252 126-327 (386)
45 2fp8_A Strictosidine synthase; 99.6 8E-14 2.7E-18 118.6 22.9 192 32-286 19-267 (322)
46 1ijq_A LDL receptor, low-densi 99.6 1.8E-13 6.2E-18 116.3 23.1 171 4-199 41-227 (316)
47 3vgz_A Uncharacterized protein 99.6 9.2E-13 3.1E-17 112.5 27.3 226 2-287 49-302 (353)
48 3a9g_A Putative uncharacterize 99.6 3.3E-13 1.1E-17 116.4 23.7 240 2-286 37-350 (354)
49 1n7d_A LDL receptor, low-densi 99.6 1.8E-14 6.2E-19 134.8 16.4 221 5-286 378-612 (699)
50 3hfq_A Uncharacterized protein 99.6 1.7E-12 5.8E-17 111.0 27.2 229 2-286 48-315 (347)
51 3e5z_A Putative gluconolactona 99.6 5.7E-13 2E-17 111.6 23.8 168 1-199 76-277 (296)
52 3u4y_A Uncharacterized protein 99.6 2.9E-12 9.9E-17 108.6 28.2 229 1-287 47-303 (331)
53 3hrp_A Uncharacterized protein 99.6 3.1E-13 1.1E-17 118.9 22.8 175 2-199 179-399 (409)
54 4a0p_A LRP6, LRP-6, low-densit 99.6 1.1E-12 3.8E-17 121.2 27.2 218 4-286 6-235 (628)
55 2ism_A Putative oxidoreductase 99.6 2.7E-13 9.3E-18 116.9 21.8 239 1-284 38-351 (352)
56 3hxj_A Pyrrolo-quinoline quino 99.6 1.5E-13 5.3E-18 116.5 19.9 172 43-285 107-281 (330)
57 4hw6_A Hypothetical protein, I 99.6 8.1E-14 2.8E-18 123.4 17.6 200 33-286 140-372 (433)
58 2dg1_A DRP35, lactonase; beta 99.6 7.8E-13 2.7E-17 112.5 22.7 196 32-286 45-261 (333)
59 3p5b_L Low density lipoprotein 99.6 6.6E-13 2.2E-17 116.4 22.3 172 3-199 122-309 (400)
60 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 7.2E-13 2.5E-17 111.5 21.5 203 24-286 10-254 (314)
61 3s94_A LRP-6, low-density lipo 99.6 2.1E-12 7.3E-17 119.1 25.6 217 7-286 320-549 (619)
62 3s94_A LRP-6, low-density lipo 99.5 1.1E-12 3.8E-17 121.0 22.9 217 7-286 12-241 (619)
63 3u4y_A Uncharacterized protein 99.5 1.7E-11 5.8E-16 103.8 28.2 223 4-286 9-250 (331)
64 4a0p_A LRP6, LRP-6, low-densit 99.5 1.7E-12 5.9E-17 119.9 23.4 171 3-199 47-226 (628)
65 3tc9_A Hypothetical hydrolase; 99.5 8.6E-13 2.9E-17 116.8 20.5 198 33-286 138-369 (430)
66 3hfq_A Uncharacterized protein 99.5 1.7E-11 5.9E-16 104.7 27.9 229 6-287 4-270 (347)
67 2p9w_A MAL S 1 allergenic prot 99.5 2.4E-12 8.3E-17 108.0 21.7 177 3-199 23-254 (334)
68 3no2_A Uncharacterized protein 99.5 1.2E-11 4E-16 103.0 24.7 213 4-278 5-233 (276)
69 3kya_A Putative phosphatase; s 99.5 2.7E-12 9.1E-17 114.3 20.7 207 33-286 140-408 (496)
70 3g4e_A Regucalcin; six bladed 99.5 6.1E-12 2.1E-16 105.7 22.0 186 34-286 15-227 (297)
71 3vgz_A Uncharacterized protein 99.5 8.3E-11 2.8E-15 100.2 28.2 209 2-277 97-334 (353)
72 3dr2_A Exported gluconolactona 99.5 5.3E-12 1.8E-16 106.4 20.3 199 24-286 37-265 (305)
73 2ism_A Putative oxidoreductase 99.5 1.7E-11 5.7E-16 105.7 22.8 222 23-286 22-295 (352)
74 3m0c_C LDL receptor, low-densi 99.4 3.3E-11 1.1E-15 113.7 24.2 185 41-287 393-588 (791)
75 2iwa_A Glutamine cyclotransfer 99.4 2.3E-11 7.7E-16 100.0 20.1 193 34-286 23-235 (266)
76 1ri6_A Putative isomerase YBHE 99.4 2E-10 7E-15 97.2 26.5 230 3-287 3-261 (343)
77 2p4o_A Hypothetical protein; p 99.4 1.3E-11 4.3E-16 104.2 18.8 191 32-286 32-240 (306)
78 2qe8_A Uncharacterized protein 99.4 1.8E-11 6.1E-16 105.0 19.5 212 22-286 7-276 (343)
79 1n7d_A LDL receptor, low-densi 99.4 1.5E-12 5.1E-17 121.9 13.5 171 4-199 417-603 (699)
80 3a9g_A Putative uncharacterize 99.4 1E-10 3.5E-15 100.7 23.5 161 26-199 23-217 (354)
81 3no2_A Uncharacterized protein 99.4 3.8E-10 1.3E-14 93.8 24.7 215 2-266 45-273 (276)
82 1l0q_A Surface layer protein; 99.4 2.6E-09 8.8E-14 92.5 30.9 222 2-287 40-274 (391)
83 1ri6_A Putative isomerase YBHE 99.4 5.3E-10 1.8E-14 94.6 25.5 226 2-286 46-306 (343)
84 1jof_A Carboxy-CIS,CIS-muconat 99.4 9.2E-10 3.2E-14 94.9 27.0 237 2-286 48-339 (365)
85 2g8s_A Glucose/sorbosone dehyd 99.4 8.7E-11 3E-15 101.2 19.8 244 1-285 25-351 (353)
86 3das_A Putative oxidoreductase 99.4 7.7E-10 2.6E-14 94.4 25.0 209 25-286 25-290 (347)
87 1jof_A Carboxy-CIS,CIS-muconat 99.3 2.7E-09 9.1E-14 92.1 28.6 186 5-198 3-212 (365)
88 3das_A Putative oxidoreductase 99.3 8.7E-10 3E-14 94.0 24.2 241 1-286 39-346 (347)
89 1nir_A Nitrite reductase; hemo 99.3 3.5E-09 1.2E-13 96.4 29.7 230 1-287 145-401 (543)
90 1l0q_A Surface layer protein; 99.3 4.7E-09 1.6E-13 90.8 29.4 216 5-286 2-231 (391)
91 3scy_A Hypothetical bacterial 99.3 1.8E-09 6.3E-14 92.6 26.5 230 2-287 58-336 (361)
92 2ghs_A AGR_C_1268P; regucalcin 99.3 1.5E-10 5.2E-15 98.5 19.4 168 2-199 98-292 (326)
93 3scy_A Hypothetical bacterial 99.3 8.5E-09 2.9E-13 88.4 28.7 226 6-287 15-290 (361)
94 3qqz_A Putative uncharacterize 99.3 2.5E-09 8.5E-14 87.3 23.7 178 4-199 38-243 (255)
95 1pby_B Quinohemoprotein amine 99.3 3.1E-09 1.1E-13 89.6 23.5 214 2-286 42-308 (337)
96 3bws_A Protein LP49; two-domai 99.2 1.6E-08 5.5E-13 88.6 27.6 240 3-287 179-431 (433)
97 3qqz_A Putative uncharacterize 99.2 1.3E-08 4.4E-13 83.1 23.8 194 33-285 28-250 (255)
98 2g8s_A Glucose/sorbosone dehyd 99.2 2.2E-09 7.5E-14 92.4 19.0 163 24-199 10-217 (353)
99 3nol_A Glutamine cyclotransfer 99.2 2.2E-08 7.4E-13 81.5 22.5 191 35-286 46-254 (262)
100 3bws_A Protein LP49; two-domai 99.1 2.9E-08 9.9E-13 87.0 24.8 219 2-286 131-388 (433)
101 1nir_A Nitrite reductase; hemo 99.1 2E-08 6.7E-13 91.4 23.9 230 1-287 186-457 (543)
102 1pby_B Quinohemoprotein amine 99.1 8.6E-08 3E-12 80.6 24.7 150 6-165 3-163 (337)
103 1qks_A Cytochrome CD1 nitrite 99.1 1.6E-07 5.6E-12 85.7 27.8 227 2-287 164-420 (567)
104 2iwa_A Glutamine cyclotransfer 99.1 1.6E-08 5.4E-13 83.1 19.0 142 4-165 75-237 (266)
105 2p9w_A MAL S 1 allergenic prot 99.1 7E-09 2.4E-13 87.1 17.1 160 75-287 12-214 (334)
106 3c75_H MADH, methylamine dehyd 99.1 1.1E-07 3.7E-12 83.5 25.0 233 6-287 86-401 (426)
107 3nok_A Glutaminyl cyclase; bet 99.1 3.2E-08 1.1E-12 80.5 19.9 188 37-287 59-265 (268)
108 3q7m_A Lipoprotein YFGL, BAMB; 99.1 5.6E-08 1.9E-12 83.9 22.6 215 4-286 103-335 (376)
109 1cru_A Protein (soluble quinop 99.0 8.2E-09 2.8E-13 91.7 16.7 176 75-279 26-249 (454)
110 1jmx_B Amine dehydrogenase; ox 99.0 1.5E-07 5.1E-12 79.6 23.7 153 2-165 8-175 (349)
111 4ery_A WD repeat-containing pr 99.0 9.4E-07 3.2E-11 73.9 27.3 173 2-199 32-212 (312)
112 1jmx_B Amine dehydrogenase; ox 99.0 1.6E-07 5.5E-12 79.4 22.4 139 37-197 4-165 (349)
113 2hqs_A Protein TOLB; TOLB, PAL 99.0 6.4E-07 2.2E-11 78.6 26.4 159 14-197 159-328 (415)
114 3q7m_A Lipoprotein YFGL, BAMB; 99.0 4.7E-07 1.6E-11 78.0 25.1 217 4-285 143-375 (376)
115 3sjl_D Methylamine dehydrogena 99.0 1.1E-06 3.7E-11 76.0 26.9 249 3-286 42-361 (386)
116 3nol_A Glutamine cyclotransfer 99.0 1.2E-07 4E-12 77.2 19.5 140 4-163 96-254 (262)
117 3q6k_A 43.2 kDa salivary prote 99.0 2.6E-07 8.8E-12 79.4 22.5 186 37-277 91-343 (381)
118 3mbr_X Glutamine cyclotransfer 99.0 3.4E-07 1.2E-11 73.8 21.9 153 76-286 21-177 (243)
119 1gxr_A ESG1, transducin-like e 99.0 2.7E-06 9.1E-11 71.3 28.7 218 2-286 106-335 (337)
120 2ojh_A Uncharacterized protein 99.0 5.6E-07 1.9E-11 73.8 23.9 166 12-197 20-191 (297)
121 1cru_A Protein (soluble quinop 98.9 8.1E-08 2.8E-12 85.3 18.5 166 25-199 20-247 (454)
122 1qks_A Cytochrome CD1 nitrite 98.9 6.4E-07 2.2E-11 81.7 24.6 229 2-286 205-475 (567)
123 3nok_A Glutaminyl cyclase; bet 98.9 2.3E-07 7.9E-12 75.5 19.0 139 4-162 105-263 (268)
124 3ow8_A WD repeat-containing pr 98.9 7.6E-06 2.6E-10 69.0 29.4 215 7-286 95-319 (321)
125 2ymu_A WD-40 repeat protein; u 98.9 3.8E-06 1.3E-10 76.2 29.3 216 2-283 353-575 (577)
126 2ymu_A WD-40 repeat protein; u 98.9 2.8E-06 9.6E-11 77.1 27.9 217 3-285 313-536 (577)
127 3mbr_X Glutamine cyclotransfer 98.9 4.8E-07 1.6E-11 72.9 19.5 140 4-163 74-233 (243)
128 2hqs_A Protein TOLB; TOLB, PAL 98.9 9.9E-07 3.4E-11 77.4 23.1 196 2-255 187-398 (415)
129 2mad_H Methylamine dehydrogena 98.9 8.8E-06 3E-10 70.3 28.6 89 3-93 30-143 (373)
130 3b7f_A Glycosyl hydrolase, BNR 98.9 3E-07 1E-11 80.1 19.4 218 1-276 19-298 (394)
131 2ece_A 462AA long hypothetical 98.8 2E-06 6.8E-11 75.2 24.0 190 6-199 97-341 (462)
132 1gxr_A ESG1, transducin-like e 98.8 8.7E-06 3E-10 68.1 27.1 174 2-199 60-244 (337)
133 3sre_A PON1, serum paraoxonase 98.8 2.1E-07 7.2E-12 79.6 16.4 183 76-287 50-251 (355)
134 1k8k_C P40, ARP2/3 complex 41 98.8 7.6E-06 2.6E-10 69.6 26.0 225 2-286 17-272 (372)
135 2oiz_A Aromatic amine dehydrog 98.8 1.5E-05 5.1E-10 68.5 27.4 86 6-93 17-126 (361)
136 4gqb_B Methylosome protein 50; 98.8 3.7E-06 1.3E-10 71.8 23.2 142 37-198 87-234 (344)
137 1got_B GT-beta; complex (GTP-b 98.8 2.1E-05 7.2E-10 66.7 27.2 174 2-199 64-246 (340)
138 1fwx_A Nitrous oxide reductase 98.8 5.3E-07 1.8E-11 81.4 17.7 189 4-199 100-350 (595)
139 3zwl_B Eukaryotic translation 98.7 1.9E-05 6.4E-10 66.9 26.3 237 2-286 83-344 (369)
140 3c75_H MADH, methylamine dehyd 98.7 2.7E-06 9.4E-11 74.6 21.2 209 2-250 126-409 (426)
141 2z3z_A Dipeptidyl aminopeptida 98.7 8.1E-06 2.8E-10 76.2 25.7 245 2-286 90-389 (706)
142 1r5m_A SIR4-interacting protei 98.7 6.6E-06 2.2E-10 71.2 23.2 170 2-199 158-350 (425)
143 1r5m_A SIR4-interacting protei 98.7 1.3E-05 4.6E-10 69.2 25.1 224 2-286 117-359 (425)
144 3vl1_A 26S proteasome regulato 98.7 8.3E-06 2.8E-10 70.8 23.5 222 3-286 107-363 (420)
145 4g56_B MGC81050 protein; prote 98.7 1.8E-06 6.2E-11 74.0 18.4 178 1-197 50-245 (357)
146 3zwl_B Eukaryotic translation 98.7 3.3E-05 1.1E-09 65.4 25.9 177 2-199 41-238 (369)
147 2pm9_A Protein WEB1, protein t 98.7 1E-05 3.5E-10 70.0 23.0 229 2-287 76-336 (416)
148 2vdu_B TRNA (guanine-N(7)-)-me 98.7 1.9E-05 6.6E-10 69.6 24.8 139 37-199 107-260 (450)
149 4gqb_B Methylosome protein 50; 98.6 4.2E-05 1.4E-09 65.2 25.5 221 3-286 92-329 (344)
150 2ojh_A Uncharacterized protein 98.6 7.7E-06 2.6E-10 66.9 20.3 171 2-198 50-236 (297)
151 3sjl_D Methylamine dehydrogena 98.6 1.2E-05 4.2E-10 69.4 22.0 211 2-253 86-373 (386)
152 1got_B GT-beta; complex (GTP-b 98.6 6.1E-05 2.1E-09 63.8 26.2 218 3-284 107-339 (340)
153 1vyh_C Platelet-activating fac 98.6 4.3E-05 1.5E-09 66.6 25.3 140 2-165 117-265 (410)
154 3pe7_A Oligogalacturonate lyas 98.6 3.3E-05 1.1E-09 66.3 23.8 192 2-198 44-257 (388)
155 2ynn_A Coatomer subunit beta'; 98.6 0.00013 4.5E-09 60.7 26.6 141 2-165 22-172 (304)
156 1erj_A Transcriptional repress 98.6 0.00017 5.8E-09 62.4 28.0 222 2-286 132-387 (393)
157 3ei3_B DNA damage-binding prot 98.6 3.1E-05 1.1E-09 66.4 23.2 177 2-199 82-271 (383)
158 2ece_A 462AA long hypothetical 98.6 5.7E-05 1.9E-09 66.1 24.5 178 3-197 147-399 (462)
159 1mda_H Methylamine dehydrogena 98.6 5E-06 1.7E-10 71.6 17.9 87 5-94 32-143 (368)
160 3mkq_A Coatomer beta'-subunit; 98.6 6.5E-05 2.2E-09 71.0 27.2 222 2-286 22-257 (814)
161 3vl1_A 26S proteasome regulato 98.6 1.2E-05 4.2E-10 69.7 20.7 140 3-165 66-212 (420)
162 3ow8_A WD repeat-containing pr 98.6 0.00024 8.3E-09 59.7 29.1 167 6-199 50-226 (321)
163 2wg3_C Hedgehog-interacting pr 98.5 1.1E-05 3.8E-10 71.6 19.6 151 1-153 21-242 (463)
164 2ecf_A Dipeptidyl peptidase IV 98.5 1.4E-05 4.8E-10 74.9 21.4 191 2-198 117-355 (741)
165 4aez_A CDC20, WD repeat-contai 98.5 0.00041 1.4E-08 60.0 28.9 217 5-286 104-334 (401)
166 2ecf_A Dipeptidyl peptidase IV 98.5 1.5E-05 5.3E-10 74.7 21.0 131 2-153 45-228 (741)
167 2xyi_A Probable histone-bindin 98.5 9.7E-05 3.3E-09 64.7 24.7 173 6-198 143-341 (430)
168 1sq9_A Antiviral protein SKI8; 98.5 0.00019 6.6E-09 61.5 26.2 225 6-286 83-393 (397)
169 3iz6_a 40S ribosomal protein R 98.5 0.00049 1.7E-08 59.1 29.2 138 112-286 226-373 (380)
170 1pgu_A Actin interacting prote 98.5 0.00015 5.1E-09 65.9 26.1 222 4-286 77-326 (615)
171 3pe7_A Oligogalacturonate lyas 98.5 1.3E-05 4.6E-10 68.7 18.0 148 2-166 89-274 (388)
172 4h5i_A Guanine nucleotide-exch 98.5 6.4E-05 2.2E-09 64.5 22.2 179 2-199 142-332 (365)
173 3o4h_A Acylamino-acid-releasin 98.4 2.6E-05 8.8E-10 71.2 20.3 138 38-199 115-265 (582)
174 3jrp_A Fusion protein of prote 98.4 0.00018 6.3E-09 61.0 24.6 178 2-199 20-229 (379)
175 1vyh_C Platelet-activating fac 98.4 0.00019 6.4E-09 62.5 25.0 220 2-286 159-409 (410)
176 4aez_A CDC20, WD repeat-contai 98.4 0.00037 1.3E-08 60.3 26.7 168 3-198 144-322 (401)
177 3i2n_A WD repeat-containing pr 98.4 0.00014 4.7E-09 61.3 23.4 173 5-197 81-278 (357)
178 2mad_H Methylamine dehydrogena 98.4 0.00034 1.2E-08 60.3 26.1 56 139-198 272-337 (373)
179 3s25_A Hypothetical 7-bladed b 98.4 0.00011 3.7E-09 61.5 22.2 133 4-166 25-177 (302)
180 1erj_A Transcriptional repress 98.4 0.00068 2.3E-08 58.5 27.6 173 2-198 73-275 (393)
181 3lrv_A PRE-mRNA-splicing facto 98.4 0.00069 2.4E-08 57.2 27.7 138 37-198 130-279 (343)
182 2pbi_B Guanine nucleotide-bind 98.4 0.00047 1.6E-08 58.7 25.8 171 2-199 73-260 (354)
183 3frx_A Guanine nucleotide-bind 98.4 0.00066 2.3E-08 56.8 27.7 170 2-199 74-257 (319)
184 4g56_B MGC81050 protein; prote 98.4 0.00011 3.6E-09 62.9 21.7 222 2-286 103-341 (357)
185 3dm0_A Maltose-binding peripla 98.4 0.00077 2.6E-08 62.8 29.1 174 2-199 439-622 (694)
186 1sq9_A Antiviral protein SKI8; 98.4 0.00031 1.1E-08 60.2 24.7 228 5-286 27-320 (397)
187 3azo_A Aminopeptidase; POP fam 98.4 9.1E-05 3.1E-09 68.5 22.6 216 3-275 88-353 (662)
188 1pgu_A Actin interacting prote 98.4 0.00023 7.9E-09 64.7 24.7 232 2-286 27-281 (615)
189 1yfq_A Cell cycle arrest prote 98.4 0.0001 3.5E-09 61.8 20.5 171 3-199 21-214 (342)
190 3s25_A Hypothetical 7-bladed b 98.3 9.2E-05 3.1E-09 62.0 19.7 193 14-287 88-292 (302)
191 3fm0_A Protein CIAO1; WDR39,SG 98.3 0.00046 1.6E-08 58.5 24.5 176 2-198 25-213 (345)
192 2xzm_R RACK1; ribosome, transl 98.3 0.00075 2.6E-08 57.0 25.8 172 3-198 86-274 (343)
193 4ery_A WD repeat-containing pr 98.3 0.00081 2.8E-08 55.7 26.8 140 2-165 74-223 (312)
194 3frx_A Guanine nucleotide-bind 98.3 0.00087 3E-08 56.1 26.4 168 6-199 32-216 (319)
195 1k8k_C P40, ARP2/3 complex 41 98.3 0.00027 9.2E-09 59.9 23.0 143 37-199 13-162 (372)
196 1nr0_A Actin interacting prote 98.3 0.00036 1.2E-08 64.1 25.2 179 1-199 26-210 (611)
197 3ei3_B DNA damage-binding prot 98.3 0.00024 8.3E-09 60.8 22.4 231 6-287 133-381 (383)
198 2aq5_A Coronin-1A; WD40 repeat 98.3 0.00016 5.6E-09 62.5 21.5 220 10-286 53-297 (402)
199 3dwl_C Actin-related protein 2 98.3 2.7E-05 9.1E-10 66.6 16.1 177 2-199 20-225 (377)
200 4e54_B DNA damage-binding prot 98.3 8.6E-05 2.9E-09 65.1 19.7 173 6-198 134-315 (435)
201 1xfd_A DIP, dipeptidyl aminope 98.3 4.5E-05 1.5E-09 71.2 18.6 131 2-153 25-192 (723)
202 3odt_A Protein DOA1; ubiquitin 98.3 0.00086 2.9E-08 55.1 24.6 213 3-286 69-294 (313)
203 3sfz_A APAF-1, apoptotic pepti 98.3 0.00047 1.6E-08 68.5 26.7 172 2-199 624-818 (1249)
204 2z3z_A Dipeptidyl aminopeptida 98.3 0.0003 1E-08 65.5 23.8 163 14-197 235-418 (706)
205 3sfz_A APAF-1, apoptotic pepti 98.3 1.8E-05 6.1E-10 78.6 16.2 221 2-286 1012-1247(1249)
206 3k26_A Polycomb protein EED; W 98.3 0.00083 2.8E-08 56.5 24.6 223 6-286 87-364 (366)
207 2vdu_B TRNA (guanine-N(7)-)-me 98.3 0.00036 1.2E-08 61.4 23.0 144 2-166 111-272 (450)
208 3odt_A Protein DOA1; ubiquitin 98.3 0.0012 4E-08 54.3 25.5 214 6-286 31-253 (313)
209 3q6k_A 43.2 kDa salivary prote 98.3 0.00027 9.2E-09 60.7 21.0 213 32-286 26-304 (381)
210 2oiz_A Aromatic amine dehydrog 98.3 6.4E-05 2.2E-09 64.5 17.3 169 11-192 170-360 (361)
211 3amr_A 3-phytase; beta-propell 98.2 0.00021 7.1E-09 60.5 19.7 132 115-286 102-261 (355)
212 2aq5_A Coronin-1A; WD40 repeat 98.2 0.00025 8.5E-09 61.3 20.8 172 3-194 141-328 (402)
213 2pbi_B Guanine nucleotide-bind 98.2 0.0013 4.4E-08 56.0 24.9 218 3-284 116-353 (354)
214 4a5s_A Dipeptidyl peptidase 4 98.2 0.0008 2.7E-08 63.3 25.2 244 2-286 70-398 (740)
215 2ynn_A Coatomer subunit beta'; 98.2 0.00074 2.5E-08 56.0 22.4 137 37-198 18-160 (304)
216 3mkq_A Coatomer beta'-subunit; 98.2 0.00052 1.8E-08 64.8 24.0 171 3-199 65-248 (814)
217 1k32_A Tricorn protease; prote 98.2 0.00043 1.5E-08 67.7 23.9 133 6-153 350-491 (1045)
218 3dw8_B Serine/threonine-protei 98.2 0.0011 3.7E-08 57.7 24.2 105 76-199 178-305 (447)
219 2ad6_A Methanol dehydrogenase 98.2 0.0019 6.5E-08 58.9 26.4 42 235-278 485-527 (571)
220 4h5i_A Guanine nucleotide-exch 98.2 0.001 3.6E-08 56.8 23.5 188 37-286 138-341 (365)
221 3fm0_A Protein CIAO1; WDR39,SG 98.2 0.00038 1.3E-08 59.0 20.5 143 37-198 21-169 (345)
222 3v7d_B Cell division control p 98.2 0.002 7E-08 56.5 25.9 217 5-286 133-379 (464)
223 1xfd_A DIP, dipeptidyl aminope 98.2 0.00039 1.3E-08 64.8 21.9 190 2-196 69-323 (723)
224 1mda_H Methylamine dehydrogena 98.1 3.8E-05 1.3E-09 66.1 13.4 128 115-286 47-192 (368)
225 3azo_A Aminopeptidase; POP fam 98.1 0.00019 6.5E-09 66.3 18.7 150 42-199 88-261 (662)
226 3jro_A Fusion protein of prote 98.1 0.00062 2.1E-08 64.2 22.5 178 2-199 18-227 (753)
227 3o4h_A Acylamino-acid-releasin 98.1 0.00011 3.6E-09 67.1 16.4 160 6-198 124-300 (582)
228 2pm9_A Protein WEB1, protein t 98.1 0.00017 5.7E-09 62.3 17.0 167 11-199 42-235 (416)
229 1kb0_A Quinohemoprotein alcoho 98.1 0.0037 1.3E-07 58.2 26.9 40 235-276 498-538 (677)
230 3dm0_A Maltose-binding peripla 98.1 0.0016 5.3E-08 60.7 24.5 168 6-199 397-581 (694)
231 3k26_A Polycomb protein EED; W 98.1 0.0015 5E-08 55.0 22.3 136 6-165 36-192 (366)
232 3amr_A 3-phytase; beta-propell 98.1 0.00092 3.1E-08 56.6 20.4 176 3-199 38-252 (355)
233 2xdw_A Prolyl endopeptidase; a 98.1 0.0034 1.2E-07 58.6 26.2 182 2-199 133-355 (710)
234 4a11_B DNA excision repair pro 98.1 0.0043 1.5E-07 52.9 27.4 218 6-286 114-363 (408)
235 3dw8_B Serine/threonine-protei 98.0 0.006 2E-07 52.9 25.7 110 37-165 182-315 (447)
236 1w6s_A Methanol dehydrogenase 98.0 0.0083 2.8E-07 55.0 26.2 43 234-278 493-536 (599)
237 3dwl_C Actin-related protein 2 98.0 0.00016 5.5E-09 61.7 14.2 145 35-199 14-166 (377)
238 2ad6_A Methanol dehydrogenase 98.0 0.0078 2.7E-07 54.9 26.1 58 4-62 115-186 (571)
239 3jrp_A Fusion protein of prote 98.0 0.0023 7.8E-08 54.1 21.4 132 37-189 16-157 (379)
240 3f3f_A Nucleoporin SEH1; struc 98.0 0.005 1.7E-07 50.9 23.3 169 2-191 20-226 (351)
241 3b7f_A Glycosyl hydrolase, BNR 98.0 0.00021 7.3E-09 61.9 15.0 172 4-198 67-298 (394)
242 1yfq_A Cell cycle arrest prote 98.0 0.00078 2.7E-08 56.3 18.1 215 3-277 66-313 (342)
243 3c5m_A Oligogalacturonate lyas 98.0 0.0048 1.7E-07 52.5 23.4 189 2-198 44-257 (396)
244 4a11_B DNA excision repair pro 98.0 0.0017 5.8E-08 55.5 20.5 173 4-199 55-265 (408)
245 3lrv_A PRE-mRNA-splicing facto 97.9 0.0023 7.9E-08 53.9 20.7 169 6-199 50-234 (343)
246 3gre_A Serine/threonine-protei 97.9 0.005 1.7E-07 53.5 23.5 228 4-286 75-357 (437)
247 2xyi_A Probable histone-bindin 97.9 0.0043 1.5E-07 54.1 23.0 193 32-286 129-351 (430)
248 1nr0_A Actin interacting prote 97.9 0.003 1E-07 58.0 22.5 106 37-165 152-270 (611)
249 3i2n_A WD repeat-containing pr 97.9 0.00036 1.2E-08 58.7 15.2 145 3-165 178-353 (357)
250 4aow_A Guanine nucleotide-bind 97.9 0.0068 2.3E-07 50.3 27.5 225 2-286 95-335 (340)
251 1fwx_A Nitrous oxide reductase 97.9 0.0016 5.3E-08 59.1 19.3 202 43-286 100-359 (595)
252 1z68_A Fibroblast activation p 97.9 0.00019 6.4E-09 67.1 13.8 124 3-153 25-188 (719)
253 1k32_A Tricorn protease; prote 97.9 0.0012 3.9E-08 64.7 19.4 134 37-197 300-438 (1045)
254 2hz6_A Endoplasmic reticulum t 97.8 8.4E-05 2.9E-09 64.0 10.0 137 3-166 8-150 (369)
255 3iz6_a 40S ribosomal protein R 97.8 0.0063 2.1E-07 52.1 21.9 168 6-199 172-364 (380)
256 2xbg_A YCF48-like protein; pho 97.8 0.0073 2.5E-07 50.8 21.6 172 3-199 45-224 (327)
257 2wg3_C Hedgehog-interacting pr 97.8 0.00041 1.4E-08 61.5 14.3 108 75-200 13-159 (463)
258 1kb0_A Quinohemoprotein alcoho 97.8 0.019 6.4E-07 53.5 26.2 58 4-62 128-200 (677)
259 2hes_X YDR267CP; beta-propelle 97.8 0.01 3.5E-07 49.7 22.4 140 6-165 26-184 (330)
260 1flg_A Protein (quinoprotein e 97.8 0.021 7E-07 52.2 25.6 41 235-277 507-548 (582)
261 4a9v_A PHOX; hydrolase, beta-p 97.8 8.2E-05 2.8E-09 66.8 8.7 75 74-154 474-551 (592)
262 1z68_A Fibroblast activation p 97.8 0.0016 5.4E-08 60.8 18.0 86 2-91 68-184 (719)
263 2xbg_A YCF48-like protein; pho 97.8 0.012 4E-07 49.5 21.8 168 5-199 90-269 (327)
264 3v7d_B Cell division control p 97.7 0.019 6.4E-07 50.2 26.9 142 3-165 172-341 (464)
265 2xzm_R RACK1; ribosome, transl 97.7 0.017 5.7E-07 48.6 26.6 169 4-199 38-233 (343)
266 1kv9_A Type II quinohemoprotei 97.7 0.027 9.3E-07 52.3 25.1 42 235-278 479-521 (668)
267 1yiq_A Quinohemoprotein alcoho 97.7 0.035 1.2E-06 51.8 26.3 42 235-278 496-538 (689)
268 2gop_A Trilobed protease; beta 97.7 0.018 6.2E-07 48.1 22.5 137 2-162 67-250 (347)
269 3mmy_A MRNA export factor; mRN 97.7 0.018 6.3E-07 48.1 22.2 134 6-165 56-199 (368)
270 3f3f_A Nucleoporin SEH1; struc 97.6 0.019 6.5E-07 47.4 23.7 110 37-166 16-144 (351)
271 2oaj_A Protein SNI1; WD40 repe 97.6 0.0067 2.3E-07 58.4 20.4 171 2-199 26-231 (902)
272 2hes_X YDR267CP; beta-propelle 97.6 0.022 7.5E-07 47.6 23.4 143 37-199 19-173 (330)
273 1yr2_A Prolyl oligopeptidase; 97.6 0.028 9.4E-07 52.8 23.4 180 2-199 171-382 (741)
274 2bkl_A Prolyl endopeptidase; m 97.6 0.01 3.5E-07 55.3 20.1 168 14-199 147-338 (695)
275 2j04_A TAU60, YPL007P, hypothe 97.6 0.033 1.1E-06 50.4 22.4 138 37-197 90-242 (588)
276 2xdw_A Prolyl endopeptidase; a 97.5 0.026 8.8E-07 52.7 22.8 129 55-198 100-252 (710)
277 1tl2_A L10, protein (tachylect 97.5 0.012 4E-07 46.4 16.8 134 37-197 45-199 (236)
278 3jro_A Fusion protein of prote 97.5 0.018 6.1E-07 54.2 21.1 132 37-189 14-155 (753)
279 3iuj_A Prolyl endopeptidase; h 97.4 0.06 2E-06 50.1 23.1 143 15-175 156-324 (693)
280 2ovr_B FBW7, F-BOX/WD repeat p 97.4 0.058 2E-06 46.9 27.1 215 6-287 211-441 (445)
281 4a5s_A Dipeptidyl peptidase 4 97.4 0.0088 3E-07 56.1 17.4 125 3-152 26-189 (740)
282 1yiq_A Quinohemoprotein alcoho 97.3 0.047 1.6E-06 50.9 21.5 111 4-128 70-197 (689)
283 3c5m_A Oligogalacturonate lyas 97.3 0.027 9.3E-07 47.8 18.6 135 13-166 167-330 (396)
284 2oit_A Nucleoporin 214KDA; NH2 97.3 0.011 3.7E-07 51.9 16.2 102 77-199 94-212 (434)
285 1tl2_A L10, protein (tachylect 97.3 0.0056 1.9E-07 48.2 12.2 91 1-93 48-152 (236)
286 4aow_A Guanine nucleotide-bind 97.3 0.06 2E-06 44.5 26.7 170 5-199 51-235 (340)
287 2j04_B YDR362CP, TAU91; beta p 97.2 0.018 6.2E-07 51.8 17.2 141 3-165 276-428 (524)
288 1p22_A F-BOX/WD-repeat protein 97.2 0.086 2.9E-06 45.7 23.0 136 6-165 185-325 (435)
289 2bkl_A Prolyl endopeptidase; m 97.2 0.05 1.7E-06 50.6 20.6 128 55-198 96-246 (695)
290 2pm7_B Protein transport prote 97.2 0.063 2.1E-06 44.0 26.1 168 2-191 18-216 (297)
291 2ovr_B FBW7, F-BOX/WD repeat p 97.2 0.094 3.2E-06 45.5 25.5 131 112-286 257-389 (445)
292 3vu4_A KMHSV2; beta-propeller 97.2 0.08 2.7E-06 44.7 26.9 86 111-199 156-260 (355)
293 3bg1_A Protein SEC13 homolog; 97.2 0.072 2.5E-06 44.1 22.3 88 2-92 22-122 (316)
294 2gop_A Trilobed protease; beta 97.2 0.065 2.2E-06 44.6 19.0 116 54-198 44-188 (347)
295 3mmy_A MRNA export factor; mRN 97.2 0.082 2.8E-06 44.0 21.1 107 37-165 44-160 (368)
296 4e54_B DNA damage-binding prot 97.1 0.0075 2.6E-07 52.6 13.1 102 77-199 121-229 (435)
297 1kv9_A Type II quinohemoprotei 97.1 0.18 6E-06 46.8 26.8 58 4-62 117-188 (668)
298 1w6s_A Methanol dehydrogenase 97.1 0.16 5.6E-06 46.4 24.6 112 4-128 62-196 (599)
299 1yr2_A Prolyl oligopeptidase; 97.1 0.13 4.5E-06 48.2 21.8 164 77-286 164-348 (741)
300 3gre_A Serine/threonine-protei 97.0 0.13 4.5E-06 44.3 22.3 105 40-165 178-292 (437)
301 1p22_A F-BOX/WD-repeat protein 97.0 0.14 4.7E-06 44.4 24.1 208 6-286 145-363 (435)
302 3zwu_A Alkaline phosphatase PH 97.0 0.01 3.6E-07 53.9 13.0 73 75-152 475-549 (592)
303 2oaj_A Protein SNI1; WD40 repe 97.0 0.04 1.4E-06 53.1 17.8 141 5-165 69-242 (902)
304 2pm7_B Protein transport prote 97.0 0.11 3.9E-06 42.4 19.5 174 5-199 67-274 (297)
305 3iuj_A Prolyl endopeptidase; h 96.9 0.25 8.4E-06 45.9 23.1 162 77-287 130-313 (693)
306 4a9v_A PHOX; hydrolase, beta-p 96.9 0.021 7.1E-07 51.4 13.8 118 135-277 385-551 (592)
307 1flg_A Protein (quinoprotein e 96.9 0.26 8.7E-06 44.9 22.2 58 4-62 68-137 (582)
308 2j04_A TAU60, YPL007P, hypothe 96.8 0.11 3.6E-06 47.2 18.0 139 2-166 94-255 (588)
309 2j04_B YDR362CP, TAU91; beta p 96.7 0.28 9.7E-06 44.0 20.1 104 76-199 267-375 (524)
310 4gga_A P55CDC, cell division c 96.7 0.27 9.3E-06 42.3 26.3 221 2-286 156-393 (420)
311 4gga_A P55CDC, cell division c 96.6 0.29 9.8E-06 42.1 27.7 135 5-165 117-261 (420)
312 3zwu_A Alkaline phosphatase PH 96.5 0.071 2.4E-06 48.5 14.5 118 134-276 384-550 (592)
313 3vu4_A KMHSV2; beta-propeller 96.3 0.43 1.5E-05 40.1 25.1 48 237-286 220-269 (355)
314 3bg1_A Protein SEC13 homolog; 96.0 0.51 1.8E-05 38.8 21.1 173 6-199 73-282 (316)
315 4ggc_A P55CDC, cell division c 95.5 0.79 2.7E-05 37.1 26.1 223 3-286 77-313 (318)
316 1k3i_A Galactose oxidase precu 95.5 0.72 2.5E-05 42.5 16.7 64 3-66 252-329 (656)
317 1sqj_A OXG-RCBH, oligoxylogluc 95.4 1.9 6.4E-05 40.8 20.3 139 4-160 27-196 (789)
318 2hz6_A Endoplasmic reticulum t 95.3 0.016 5.6E-07 49.5 4.6 129 112-285 17-146 (369)
319 2oit_A Nucleoporin 214KDA; NH2 94.3 2.4 8.3E-05 36.7 18.4 109 37-165 154-278 (434)
320 2cn3_A Xyloglucanase, beta-1,4 94.2 3.7 0.00013 38.4 24.4 89 4-92 35-150 (737)
321 2xe4_A Oligopeptidase B; hydro 94.1 3.3 0.00011 38.8 17.6 105 78-198 176-290 (751)
322 4ggc_A P55CDC, cell division c 93.6 2.3 8E-05 34.2 27.1 136 4-165 36-181 (318)
323 2be1_A Serine/threonine-protei 93.2 0.44 1.5E-05 40.1 8.8 110 3-130 9-137 (339)
324 2w18_A PALB2, fancn, partner a 92.2 4.7 0.00016 34.1 19.9 38 112-149 201-242 (356)
325 3ii7_A Kelch-like protein 7; p 92.0 4.2 0.00014 33.0 23.5 230 5-286 12-270 (306)
326 2uvk_A YJHT; unknown function, 91.7 5.1 0.00017 33.3 19.7 85 4-92 19-124 (357)
327 2zwa_A Leucine carboxyl methyl 91.3 9.2 0.00031 35.5 22.0 146 4-167 397-579 (695)
328 2w18_A PALB2, fancn, partner a 89.8 8.2 0.00028 32.6 21.1 183 4-198 144-345 (356)
329 3a0f_A Xyloglucanase; beta-pro 89.4 14 0.00048 34.7 23.0 138 5-160 34-208 (763)
330 1k3i_A Galactose oxidase precu 88.8 7.9 0.00027 35.5 13.5 111 37-165 190-323 (656)
331 4gq1_A NUP37; propeller, trans 88.4 4.1 0.00014 34.5 10.7 73 76-165 137-218 (393)
332 2xn4_A Kelch-like protein 2; s 88.3 8.9 0.0003 30.9 22.6 218 14-286 30-274 (302)
333 1zgk_A Kelch-like ECH-associat 87.3 10 0.00036 30.7 23.4 228 4-286 24-285 (308)
334 4asc_A Kelch repeat and BTB do 86.3 12 0.00041 30.4 24.7 212 14-275 13-250 (315)
335 3sbq_A Nitrous-oxide reductase 85.9 2.8 9.5E-05 37.8 8.0 85 115-199 299-397 (638)
336 2be1_A Serine/threonine-protei 84.6 5.5 0.00019 33.4 9.0 106 111-252 17-139 (339)
337 2cn3_A Xyloglucanase, beta-1,4 83.9 28 0.00095 32.5 17.9 116 37-161 27-160 (737)
338 4gq1_A NUP37; propeller, trans 83.6 19 0.00064 30.3 21.2 58 139-199 321-379 (393)
339 2vpj_A Kelch-like protein 12; 83.4 16 0.00054 29.3 22.7 133 14-165 78-231 (301)
340 3a0f_A Xyloglucanase; beta-pro 82.1 11 0.00036 35.5 10.8 144 4-163 600-760 (763)
341 2woz_A Kelch repeat and BTB do 81.2 20 0.00069 29.0 24.4 217 6-274 17-259 (318)
342 2xe4_A Oligopeptidase B; hydro 80.9 36 0.0012 31.7 19.8 112 37-165 178-304 (751)
343 2vpj_A Kelch-like protein 12; 80.7 20 0.00069 28.7 24.6 219 14-286 31-276 (301)
344 2woz_A Kelch repeat and BTB do 80.6 21 0.00073 28.9 18.1 195 45-286 17-229 (318)
345 2zwa_A Leucine carboxyl methyl 79.6 39 0.0013 31.2 21.5 150 37-199 391-559 (695)
346 1zgk_A Kelch-like ECH-associat 74.3 32 0.0011 27.6 21.4 133 15-166 91-241 (308)
347 3f6k_A Sortilin; protein sorti 74.0 16 0.00056 33.7 9.2 55 38-92 50-108 (685)
348 1sqj_A OXG-RCBH, oligoxylogluc 72.2 65 0.0022 30.2 17.0 111 37-160 19-147 (789)
349 3s9j_A Member of DUF4221 famil 71.4 24 0.00082 29.9 9.1 76 144-253 38-119 (369)
350 3ii7_A Kelch-like protein 7; p 65.3 51 0.0017 26.3 22.6 144 4-165 55-225 (306)
351 2uvk_A YJHT; unknown function, 63.9 59 0.002 26.6 15.7 50 235-286 168-224 (357)
352 4asc_A Kelch repeat and BTB do 61.6 61 0.0021 26.0 19.7 136 115-286 68-219 (315)
353 2xn4_A Kelch-like protein 2; s 61.6 59 0.002 25.8 22.3 135 14-165 77-229 (302)
354 1xip_A Nucleoporin NUP159; bet 55.1 97 0.0033 26.3 14.2 99 34-166 90-192 (388)
355 3f6k_A Sortilin; protein sorti 43.5 2E+02 0.0069 26.5 21.4 56 12-67 63-134 (685)
356 3sbq_A Nitrous-oxide reductase 39.8 2.2E+02 0.0075 25.9 11.9 66 24-92 315-394 (638)
357 3al9_A Plexin-A2; beta-propell 34.3 98 0.0033 27.7 6.9 53 6-59 415-477 (539)
358 1xip_A Nucleoporin NUP159; bet 32.0 2.3E+02 0.0079 23.9 18.2 118 5-152 98-232 (388)
359 1q47_A Semaphorin 3A; beta pro 29.4 1.1E+02 0.0038 27.0 6.3 53 6-59 423-488 (495)
360 4gz8_A Semaphorin-3A; multi-do 27.1 1.8E+02 0.0061 26.8 7.4 53 6-59 431-496 (667)
361 1olz_A Semaphorin 4D; developm 25.5 2.3E+02 0.008 26.0 8.0 53 6-59 417-478 (663)
362 3ol2_B Plexin-B1; beta-propell 25.0 2.2E+02 0.0074 25.4 7.4 53 6-59 402-462 (528)
363 3nvq_A Semaphorin-7A; beta-pro 23.0 2.3E+02 0.008 25.6 7.3 53 6-59 382-445 (590)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.97 E-value=4.9e-29 Score=213.14 Aligned_cols=260 Identities=25% Similarity=0.389 Sum_probs=195.9
Q ss_pred CCCCCc-EEEEecCCeEEEEE-C-CceEEEEee--------------------CCccccCeEECC-CCcEEEEeCCCceE
Q 023085 1 MDKNGV-IYTATRDGWIKRLQ-D-GTWVNWKFI--------------------DSQTLVGLTSTK-EGHLIICDNANGLH 56 (287)
Q Consensus 1 ~d~~G~-l~~~~~~g~i~~~~-~-~~~~~~~~~--------------------~~~~~~~i~~d~-dg~l~v~~~~~gi~ 56 (287)
+|++|+ +|+++.+++|++++ + +.+..+... ...|. ++++++ +|+|||++..++++
T Consensus 26 ~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~-gi~~~~~~g~l~v~d~~~~i~ 104 (322)
T 2fp8_A 26 FDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTY-DISYNLQNNQLYIVDCYYHLS 104 (322)
T ss_dssp CCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEE-EEEEETTTTEEEEEETTTEEE
T ss_pred EcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCc-eEEEcCCCCcEEEEECCCCEE
Confidence 467887 88888899999999 4 456665431 13577 899997 89999998888899
Q ss_pred EEcc-CC-cEEEeeecCCccccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccc
Q 023085 57 KVSE-DG-VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF 133 (287)
Q Consensus 57 ~~~~-~g-~~~~~~~~~~~~~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 133 (287)
+++. ++ ++.+.....+.++..|+++++++ +|++|+++....++...+..........+.|++++++++++..+...+
T Consensus 105 ~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~ 184 (322)
T 2fp8_A 105 VVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKEL 184 (322)
T ss_dssp EECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEE
T ss_pred EEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCC
Confidence 9994 46 66665444444566899999999 999999986533322221111111233478999999888877766667
Q ss_pred cccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchh
Q 023085 134 YFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKL 213 (287)
Q Consensus 134 ~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~ 213 (287)
..|++++++++++.||++++..++|++|++++......+.+.. .++ |+++++|++|+||+++...+...
T Consensus 185 ~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~~~~~~--------- 253 (322)
T 2fp8_A 185 HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSEELDGN--------- 253 (322)
T ss_dssp SCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEEETTSS---------
T ss_pred ccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecCccccc---------
Confidence 8899999999999999999988999999987644445555543 456 99999999999999997521100
Q ss_pred HHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEeCC
Q 023085 214 IKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~~ 287 (287)
| .....+.|++++++|+.+..+..++|..++.++.++..+++|||++..+++|.+|++.
T Consensus 254 --------~-------~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 254 --------M-------HGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp --------T-------TSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred --------c-------cCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence 0 0112468999999999999999887766777888888899999999999999999873
No 2
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.95 E-value=8e-25 Score=185.52 Aligned_cols=238 Identities=17% Similarity=0.240 Sum_probs=177.9
Q ss_pred CCCCc--EEEEecCCeEEEEE-CCceEEEEeeCCccccCeEECCCCcEEEEeCC-CceEEEccCC-cEEEeeecCCcccc
Q 023085 2 DKNGV--IYTATRDGWIKRLQ-DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENFLSYVNGSKLR 76 (287)
Q Consensus 2 d~~G~--l~~~~~~g~i~~~~-~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~~~g-~~~~~~~~~~~~~~ 76 (287)
+++|. +|++..+++|++++ +++...+......+. +++++++|+||+++.. .+|.+++.+| .+.+.....+....
T Consensus 53 ~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~-gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~ 131 (305)
T 3dr2_A 53 WEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTN-GNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLN 131 (305)
T ss_dssp EGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEE-EEEECTTSCEEEEETTTTEEEEECTTSCEEEEECEETTEECS
T ss_pred eCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccc-eeeECCCCCEEEEECCCCEEEEECCCCCEEEEEeccCCCccC
Confidence 45675 45555789999999 777777777777788 9999999999999866 5799999668 77776554555567
Q ss_pred ccceEEEcCCCcEEEEcCCCCCCCcc-eee-eeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCC
Q 023085 77 FANDVVEASDGSLYFTVSSSKYLPHE-YCL-DILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESW 154 (287)
Q Consensus 77 ~~~~l~~d~~g~l~v~~~~~~~~~~~-~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~ 154 (287)
.|++++++++|++|++|.. ++... +.. ........+.|++++++++++..+. ....|++++++||++.||++++.
T Consensus 132 ~~~~i~~d~dG~l~~td~~--~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~ 208 (305)
T 3dr2_A 132 SPNDLIVARDGAIWFTDPP--FGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTP 208 (305)
T ss_dssp CCCCEEECTTSCEEEECCS--GGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECC
T ss_pred CCCCEEECCCCCEEEeCcC--CCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecC
Confidence 8999999999999998753 11100 000 0000112468999999878877776 77789999999999999999986
Q ss_pred C-----CEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccc
Q 023085 155 K-----FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFI 229 (287)
Q Consensus 155 ~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
. ++|++|+++...+...+.+.....+.|+++++|++|+||+++..
T Consensus 209 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~------------------------------ 258 (305)
T 3dr2_A 209 EQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT------------------------------ 258 (305)
T ss_dssp C---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS------------------------------
T ss_pred CcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC------------------------------
Confidence 3 78999998754333344444334567999999999999999854
Q ss_pred cCCCceEEEEECCCCcEEEEEECCCCccccceEEEEE--eCCEEEEEecCCCeEEEEeC
Q 023085 230 TLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQ--VDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 230 ~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~g~l~i~~~~~~~i~~~~~ 286 (287)
+|.+++++|+.+..+..+.+ ++.++. ++++|||++. +.|.++++
T Consensus 259 ------gv~~~~~~g~~~~~~~~~~~-----~~~~~f~~d~~~L~it~~--~~l~~~~~ 304 (305)
T 3dr2_A 259 ------GVCVFDSDGQLLGHIPTPGT-----ASNCTFDQAQQRLFITGG--PCLWMLPL 304 (305)
T ss_dssp ------EEEEECTTSCEEEEEECSSC-----CCEEEECTTSCEEEEEET--TEEEEEEC
T ss_pred ------cEEEECCCCCEEEEEECCCc-----eeEEEEeCCCCEEEEEcC--CeEEEEEC
Confidence 79999999999999887652 444444 3578999986 47888775
No 3
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.94 E-value=5.3e-25 Score=188.66 Aligned_cols=257 Identities=18% Similarity=0.285 Sum_probs=184.1
Q ss_pred CCCCcEEEEe-------------cCCeEEEEE-C---CceEEEEeeC-------CccccCeEECC--CC--cEEEEeCCC
Q 023085 2 DKNGVIYTAT-------------RDGWIKRLQ-D---GTWVNWKFID-------SQTLVGLTSTK--EG--HLIICDNAN 53 (287)
Q Consensus 2 d~~G~l~~~~-------------~~g~i~~~~-~---~~~~~~~~~~-------~~~~~~i~~d~--dg--~l~v~~~~~ 53 (287)
+++|.+|+++ ..|.|++++ + ++.+.+.... ..|. ||.+.+ +| +|||+++..
T Consensus 58 ~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~Ph-Gi~~~~d~dg~~~L~Vvnh~~ 136 (355)
T 3sre_A 58 LPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPH-GISTFIDDDNTVYLLVVNHPG 136 (355)
T ss_dssp CTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEE-EEEEEECTTCCEEEEEEECST
T ss_pred cCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeee-eeEEEECCCCcEEEEEEECCC
Confidence 5689999997 689999999 3 3444444332 3677 888754 56 599998764
Q ss_pred c-----eEEEccCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcce-eeeeeccCCCceEEEEeCCCCee
Q 023085 54 G-----LHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEY-CLDILEGKPHGQLLKYDPSSNIT 126 (287)
Q Consensus 54 g-----i~~~~~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~ 126 (287)
+ +++++.++ ...+.....+.++..||+++++++|++|+++... +....+ ..+...+...+.|+++++. ++
T Consensus 137 ~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~-ftd~~~~~~e~~~~~~~g~vyr~d~~--~~ 213 (355)
T 3sre_A 137 SSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHY-FIDPYLKSWEMHLGLAWSFVTYYSPN--DV 213 (355)
T ss_dssp TCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCS-CSSHHHHHHHHHTTCCCEEEEEECTT--CC
T ss_pred CCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcE-eCCcccccchhhccCCccEEEEEECC--eE
Confidence 3 88888655 5555555566778899999999999999987542 100000 0011112345789999984 66
Q ss_pred EEeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecC-CCCcceeEEeccCCCCCcceeeCC-CCCEEEEEeccchhH
Q 023085 127 TLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG-ERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARR 204 (287)
Q Consensus 127 ~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~d~-~G~lwv~~~~~~~~~ 204 (287)
+.+...+..|||++++||++.||++++..++|++|+++. +++...+.+ ..++.|+|+++|+ +|+||+++.....++
T Consensus 214 ~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~--~~~g~PDGi~vD~e~G~lwva~~~~g~~v 291 (355)
T 3sre_A 214 RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL--SFDTLVDNISVDPVTGDLWVGCHPNGMRI 291 (355)
T ss_dssp EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSEEEEEEECTTTCCEEEEEESCHHHH
T ss_pred EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE--eCCCCCceEEEeCCCCcEEEEecCCceEE
Confidence 667778899999999999999999999999999999863 344444555 3467899999999 599999886533333
Q ss_pred HHHhhcchhHHHHHHhCCccccccccCCCceEEEEEC----CCCcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCe
Q 023085 205 MKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA----EDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNF 280 (287)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~ 280 (287)
+.+ .|+. .....|.|+. .+++..+.|.. +|..++..+.+.+.+++||||+...+
T Consensus 292 ~~~-------------~P~~-------~~~s~v~rI~~~~~~~~~v~~v~~d-dG~~l~~~T~a~~~~g~L~iGsv~~~- 349 (355)
T 3sre_A 292 FFY-------------DAEN-------PPGSEVLRIQDILSEEPKVTVVYAE-NGTVLQGSTVAAVYKGKLLIGTVFHK- 349 (355)
T ss_dssp HSC-------------CTTS-------CCCEEEEEEECTTSSSCEEEEEEEE-CSSSCCSEEEEEEETTEEEEEESSSC-
T ss_pred EEE-------------CCCC-------CCCCEEEEEEccCCCCcEEEEEEEc-CCCEEEeeEEEEEECCEEEEEEcCCC-
Confidence 322 1221 1235677776 46777888886 78888888988889999999999888
Q ss_pred EEEEeC
Q 023085 281 IGKVQL 286 (287)
Q Consensus 281 i~~~~~ 286 (287)
+..|+|
T Consensus 350 ~l~c~~ 355 (355)
T 3sre_A 350 ALYCDL 355 (355)
T ss_dssp EEEEEC
T ss_pred ceeccC
Confidence 777775
No 4
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.93 E-value=4.9e-23 Score=173.48 Aligned_cols=237 Identities=20% Similarity=0.261 Sum_probs=172.2
Q ss_pred CCCCc--EEEEecCCeEEEEE-CCceEEEEeeCCccccCeEECCCCcEEEEeCC-CceEEEc-cCC-cEEEeeecCCccc
Q 023085 2 DKNGV--IYTATRDGWIKRLQ-DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG-VENFLSYVNGSKL 75 (287)
Q Consensus 2 d~~G~--l~~~~~~g~i~~~~-~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~-~~g-~~~~~~~~~~~~~ 75 (287)
|++|. +|+++.+++|++++ ++....+......|. +++++++|+||+++.. .+|.+++ .+| .+.+.....+.+.
T Consensus 36 d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 114 (296)
T 3e5z_A 36 VPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQN-GHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKL 114 (296)
T ss_dssp EGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEE-EEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEEC
T ss_pred eCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcc-eeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCC
Confidence 56776 55666889999999 444666666666677 9999999999999865 6799999 588 7666544344445
Q ss_pred cccceEEEcCCCcEEEEcCCC-CCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCC
Q 023085 76 RFANDVVEASDGSLYFTVSSS-KYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESW 154 (287)
Q Consensus 76 ~~~~~l~~d~~g~l~v~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~ 154 (287)
..|++++++++|++|+++... .......... ......+.|++++++ +++..+......|++++++|+++.+ ++++.
T Consensus 115 ~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~-~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~ 191 (296)
T 3e5z_A 115 NSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGG-EMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLL-VSDTG 191 (296)
T ss_dssp CCCCCEEECTTSCEEEEECSHHHHCGGGSSCC-CCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEE-EEETT
T ss_pred CCCCCEEECCCCCEEEECCccccccccccccc-cccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEE-EEeCC
Confidence 678999999999999986520 0000000000 001124589999988 7777777777889999999999977 99888
Q ss_pred CCEEEEEEec-CCCC-cceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCC
Q 023085 155 KFRCRKYWLK-GERK-GKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLG 232 (287)
Q Consensus 155 ~~~l~~~~~~-~~~~-~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
.++|++|+++ .+++ .....+ ....+.|+++++|++|+||+++ .
T Consensus 192 ~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~-~--------------------------------- 236 (296)
T 3e5z_A 192 DNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA-G--------------------------------- 236 (296)
T ss_dssp TTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE-T---------------------------------
T ss_pred CCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc-C---------------------------------
Confidence 8999999986 3333 333444 3345679999999999999999 4
Q ss_pred CceEEEEECCCCcEEEEEECCCCccccceEEEEE---eCCEEEEEecCCCeEEEEeC
Q 023085 233 GGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQ---VDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 233 ~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~g~l~i~~~~~~~i~~~~~ 286 (287)
++|.+++++|+.+..+..+.+ ++.+++ +++.||+++. +.|.++++
T Consensus 237 --~~v~~~~~~g~~~~~~~~~~~-----~~~~~f~~~d~~~L~v~t~--~~l~~~~~ 284 (296)
T 3e5z_A 237 --DGVHVLTPDGDELGRVLTPQT-----TSNLCFGGPEGRTLYMTVS--TEFWSIET 284 (296)
T ss_dssp --TEEEEECTTSCEEEEEECSSC-----CCEEEEESTTSCEEEEEET--TEEEEEEC
T ss_pred --CeEEEECCCCCEEEEEECCCC-----ceeEEEECCCCCEEEEEcC--CeEEEEEc
Confidence 389999999999988886553 444444 2368999985 47888775
No 5
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.92 E-value=2.8e-22 Score=169.27 Aligned_cols=227 Identities=14% Similarity=0.174 Sum_probs=166.2
Q ss_pred CCcEEEEe-cCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCCCceEEEc-cCC-cEEEeeecCCcccccc
Q 023085 4 NGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFA 78 (287)
Q Consensus 4 ~G~l~~~~-~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~ 78 (287)
++.||+.+ .+++|++++ +++...+ .....+. +++++++|+||+++ ..+|++++ .++ ++.+.....+.+...+
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~~~~~~-~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~ 100 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRV-TMDAPVS-SVALRQSGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRF 100 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEE-ECSSCEE-EEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEE-eCCCceE-EEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCC
Confidence 56777776 678999999 4555443 3345566 89999999999998 56999999 667 7766554333445678
Q ss_pred ceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCCCEE
Q 023085 79 NDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRC 158 (287)
Q Consensus 79 ~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l 158 (287)
++++++++|++|+++........ ......+.|++++++ +++..+......|++++++|+++.||++++..++|
T Consensus 101 ~di~~d~dG~l~~~~~~~~~~~~------~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i 173 (297)
T 3g4e_A 101 NDGKVDPAGRYFAGTMAEETAPA------VLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSV 173 (297)
T ss_dssp EEEEECTTSCEEEEEEECCSBTT------BCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEE
T ss_pred CCEEECCCCCEEEecCCcccccc------cccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEEecCCCCcE
Confidence 99999999999997533110000 001234689999986 66666666677899999999999999999988999
Q ss_pred EEEEec--CCCCcceeEEec--cCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCc
Q 023085 159 RKYWLK--GERKGKLETFAE--NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGG 234 (287)
Q Consensus 159 ~~~~~~--~~~~~~~~~~~~--~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
++|+++ ++.....+.+.. ...+.|+++++|++|+||+++.. .
T Consensus 174 ~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~----------------------------------~ 219 (297)
T 3g4e_A 174 DAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN----------------------------------G 219 (297)
T ss_dssp EEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET----------------------------------T
T ss_pred EEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC----------------------------------C
Confidence 999974 333333344432 12357999999999999999986 3
Q ss_pred eEEEEECCC-CcEEEEEECCCCccccceEEEEEe---CCEEEEEecCC
Q 023085 235 AHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV---DNHLYVISLTS 278 (287)
Q Consensus 235 ~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~---~g~l~i~~~~~ 278 (287)
+.|.+++++ |+.+..+..+.. .++++++. .++|||++...
T Consensus 220 ~~v~~~d~~tG~~~~~i~~p~~----~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 220 GRVIRLDPVTGKRLQTVKLPVD----KTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp TEEEEECTTTCCEEEEEECSSS----BEEEEEEESGGGCEEEEEEBCT
T ss_pred CEEEEEcCCCceEEEEEECCCC----CceEEEEeCCCCCEEEEEcCCc
Confidence 579999998 888888887642 46777774 37899999753
No 6
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.92 E-value=2.1e-22 Score=170.37 Aligned_cols=245 Identities=20% Similarity=0.277 Sum_probs=174.1
Q ss_pred CCCCCcEEEE--------ecCCeEEEEE--CCceEEEEe-----eCCccccCeEECCC-CcEEEEeCCCceEEEccCC-c
Q 023085 1 MDKNGVIYTA--------TRDGWIKRLQ--DGTWVNWKF-----IDSQTLVGLTSTKE-GHLIICDNANGLHKVSEDG-V 63 (287)
Q Consensus 1 ~d~~G~l~~~--------~~~g~i~~~~--~~~~~~~~~-----~~~~~~~~i~~d~d-g~l~v~~~~~gi~~~~~~g-~ 63 (287)
+|++|.||++ +.+++|++++ ++++..+.. ....+. +++++++ |+||+++...+|++++.+| .
T Consensus 25 ~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~~~~~g~l~v~~~~~~l~~~d~~g~~ 103 (314)
T 1pjx_A 25 FDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPA-GCQCDRDANQLFVADMRLGLLVVQTDGTF 103 (314)
T ss_dssp ECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEE-EEEECSSSSEEEEEETTTEEEEEETTSCE
T ss_pred ECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCc-eEEEecCCCcEEEEECCCCEEEEeCCCCE
Confidence 3678999998 5788999999 677766544 234567 8999999 9999998767899999448 6
Q ss_pred EEE-eeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEc
Q 023085 64 ENF-LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALS 142 (287)
Q Consensus 64 ~~~-~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~ 142 (287)
..+ .......+...|++++++++|++|+++.........+.. ......+.|++++++ +++..+......+++++++
T Consensus 104 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~ 180 (314)
T 1pjx_A 104 EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR--SMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVR 180 (314)
T ss_dssp EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB--TTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEE
T ss_pred EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc--cccCCCCeEEEECCC-CCEEEeccCCCCcceEEEe
Confidence 554 332223334578999999999999986431000000000 001123689999987 7766655556678999999
Q ss_pred ----cCCCEEEEEeCCCCEEEEEEec-CCCCcceeEEecc--CC-CCCcceeeCCCCCEEEEEeccchhHHHHhhcchhH
Q 023085 143 ----RDEDYVVVCESWKFRCRKYWLK-GERKGKLETFAEN--LP-GAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLI 214 (287)
Q Consensus 143 ----~~~~~l~v~~~~~~~l~~~~~~-~~~~~~~~~~~~~--~~-~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~ 214 (287)
++++.+|+++...++|++|+.+ ..+......+... .. +.|.++++|++|+||+++..
T Consensus 181 ~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~--------------- 245 (314)
T 1pjx_A 181 HMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG--------------- 245 (314)
T ss_dssp ECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET---------------
T ss_pred cccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC---------------
Confidence 9998899999888999999976 2222222233211 11 46899999999999999875
Q ss_pred HHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCCccccceEEEEEe-CCE-EEEEecCCCeEEEEeCC
Q 023085 215 KHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV-DNH-LYVISLTSNFIGKVQLS 287 (287)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~g~-l~i~~~~~~~i~~~~~~ 287 (287)
.++|.+++++ ++.+..+..+. ..+.+++++ +++ ||+++...+.|.+|+++
T Consensus 246 -------------------~~~i~~~d~~~g~~~~~~~~~~----~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 246 -------------------SSHIEVFGPDGGQPKMRIRCPF----EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp -------------------TTEEEEECTTCBSCSEEEECSS----SCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred -------------------CCEEEEEcCCCCcEeEEEeCCC----CCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 2589999998 77777776542 356777775 555 99999988999999863
No 7
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.87 E-value=3.9e-20 Score=153.14 Aligned_cols=224 Identities=17% Similarity=0.215 Sum_probs=158.8
Q ss_pred CCCCCcEEE-Ee-cCCeEEEEE-CC-ceEEEEee-CCccccCeEECCCCcEEEEeCCCceEEEccCC--cEEEeeecCCc
Q 023085 1 MDKNGVIYT-AT-RDGWIKRLQ-DG-TWVNWKFI-DSQTLVGLTSTKEGHLIICDNANGLHKVSEDG--VENFLSYVNGS 73 (287)
Q Consensus 1 ~d~~G~l~~-~~-~~g~i~~~~-~~-~~~~~~~~-~~~~~~~i~~d~dg~l~v~~~~~gi~~~~~~g--~~~~~~~~~~~ 73 (287)
+|++|.||+ +. .+++|.+++ .+ ....+... ...|. +++++++|+||+++..++|++++.++ ...+.. .
T Consensus 31 ~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~-~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~----~ 105 (270)
T 1rwi_B 31 VDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQ-GLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPF----D 105 (270)
T ss_dssp ECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCC-CEEECTTCCEEEEETTTEEEEECTTCSCCEECCC----C
T ss_pred ECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcc-eeEECCCCCEEEEcCCCEEEEEeCCCceEeeeec----C
Confidence 367899999 74 678999998 32 22222222 24577 99999999999998756799999555 433211 1
Q ss_pred cccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccccccceEEEccCCCEEEEEe
Q 023085 74 KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYVVVCE 152 (287)
Q Consensus 74 ~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~l~v~~ 152 (287)
....|.+++++++|++|+++.. .+.|++++..+...... ......|++++++++++ +|+++
T Consensus 106 ~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~ 167 (270)
T 1rwi_B 106 GLNYPEGLAVDTQGAVYVADRG-----------------NNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTD 167 (270)
T ss_dssp SCSSEEEEEECTTCCEEEEEGG-----------------GTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EEEEE
T ss_pred CcCCCcceEECCCCCEEEEECC-----------------CCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-EEEEE
Confidence 2357889999999999997522 45799997654433322 23345789999999997 99999
Q ss_pred CCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCC
Q 023085 153 SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLG 232 (287)
Q Consensus 153 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
...++|.+++.++... ..........|.++++|++|+||+++..
T Consensus 168 ~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~i~~d~~g~l~v~~~~--------------------------------- 211 (270)
T 1rwi_B 168 TDNNRVVKLEAESNNQ---VVLPFTDITAPWGIAVDEAGTVYVTEHN--------------------------------- 211 (270)
T ss_dssp GGGTEEEEECTTTCCE---EECCCSSCCSEEEEEECTTCCEEEEETT---------------------------------
T ss_pred CCCCEEEEEecCCCce---EeecccCCCCceEEEECCCCCEEEEECC---------------------------------
Confidence 8788999999754321 1111111146899999999999999975
Q ss_pred CceEEEEECCCCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeCC
Q 023085 233 GGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 233 ~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~~ 287 (287)
.+.|.++++++.....+.. .+ ...+.+++++ +|+||+++..+++|.++++.
T Consensus 212 -~~~v~~~~~~~~~~~~~~~-~~--~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 212 -TNQVVKLLAGSTTSTVLPF-TG--LNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp -TSCEEEECTTCSCCEECCC-CS--CSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred -CCcEEEEcCCCCcceeecc-CC--CCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 3579999998876554332 22 3567888886 68999999999999999864
No 8
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.87 E-value=1.1e-19 Score=155.14 Aligned_cols=238 Identities=19% Similarity=0.251 Sum_probs=166.4
Q ss_pred CCCCCcEEEE-ecCCeEEEEE--CCceEEEE-eeCCccccCeEECCCCcEEEEeCCC-----ceEEEc-cCC-cEEEeee
Q 023085 1 MDKNGVIYTA-TRDGWIKRLQ--DGTWVNWK-FIDSQTLVGLTSTKEGHLIICDNAN-----GLHKVS-EDG-VENFLSY 69 (287)
Q Consensus 1 ~d~~G~l~~~-~~~g~i~~~~--~~~~~~~~-~~~~~~~~~i~~d~dg~l~v~~~~~-----gi~~~~-~~g-~~~~~~~ 69 (287)
+|++|.||++ +.+++|++++ +++...+. .....+. +++++++|++|+++... +|++++ .++ .+.+...
T Consensus 52 ~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 130 (333)
T 2dg1_A 52 FDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPA-AIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIED 130 (333)
T ss_dssp ECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEE-EEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECS
T ss_pred ECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcc-eEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEcc
Confidence 3678999975 4778999999 56666554 3345566 99999999999998654 799999 555 5533221
Q ss_pred cCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEE
Q 023085 70 VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVV 149 (287)
Q Consensus 70 ~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~ 149 (287)
. .....|++++++++|++|+++.... .....+.|++++++++++..+......+++++++|+++.||
T Consensus 131 ~--~~~~~~~~i~~d~~g~l~v~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~ 197 (333)
T 2dg1_A 131 L--STAYCIDDMVFDSKGGFYFTDFRGY-----------STNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLW 197 (333)
T ss_dssp S--SSCCCEEEEEECTTSCEEEEECCCB-----------TTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEE
T ss_pred C--ccCCcccceEECCCCCEEEEecccc-----------ccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEE
Confidence 1 1234688999999999999754210 00124679999988667666555556789999999999999
Q ss_pred EEeCCCCEEEEEEecC-CC-Ccce--eEEecc-CCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCcc
Q 023085 150 VCESWKFRCRKYWLKG-ER-KGKL--ETFAEN-LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 224 (287)
Q Consensus 150 v~~~~~~~l~~~~~~~-~~-~~~~--~~~~~~-~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (287)
+++...++|++|+.+. .. .... ..+... ....|+++++|++|++|+++..
T Consensus 198 v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~------------------------- 252 (333)
T 2dg1_A 198 VTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG------------------------- 252 (333)
T ss_dssp EEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET-------------------------
T ss_pred EEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC-------------------------
Confidence 9988778999999853 11 1111 111111 1136899999999999999975
Q ss_pred ccccccCCCceEEEEECCCCcEEEEEECCCCc--cccceEEEEEe-C-CEEEEEecCC-----CeEEEEeC
Q 023085 225 FSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQ--LMSFVTSGLQV-D-NHLYVISLTS-----NFIGKVQL 286 (287)
Q Consensus 225 ~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~-~-g~l~i~~~~~-----~~i~~~~~ 286 (287)
.++|.+++++++.+..+..+... .+..+..++.. + ++||+++..+ ..|.++++
T Consensus 253 ---------~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 253 ---------QGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp ---------TTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred ---------CCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEec
Confidence 25899999999888888754320 11235555553 3 6999999874 47777765
No 9
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.87 E-value=2.9e-19 Score=151.38 Aligned_cols=217 Identities=20% Similarity=0.240 Sum_probs=157.4
Q ss_pred CCCCCcEEEEe-cCCeEEEEE-CCceEEEEeeCCccccCeEECCCCcEEEEeCC-Cc--eEEEc-cCC-cEEEeeecCCc
Q 023085 1 MDKNGVIYTAT-RDGWIKRLQ-DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA-NG--LHKVS-EDG-VENFLSYVNGS 73 (287)
Q Consensus 1 ~d~~G~l~~~~-~~g~i~~~~-~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~-~g--i~~~~-~~g-~~~~~~~~~~~ 73 (287)
+|++|+||+++ .+++|++++ +++...+......|. +++++++|+||+++.. ++ |++++ ++| ++.+....
T Consensus 39 ~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~-gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~--- 114 (306)
T 2p4o_A 39 SAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVS-GLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLP--- 114 (306)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEE-EEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECT---
T ss_pred ECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCce-eEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCC---
Confidence 36789999998 678999999 776666555666788 9999999999999854 23 88888 778 76654431
Q ss_pred cccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-----------eccccccceEEEc
Q 023085 74 KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-----------ADGFYFANGVALS 142 (287)
Q Consensus 74 ~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-----------~~~~~~~~~i~~~ 142 (287)
....+++++...++.+|+++.. .+.||++|+.+++.... ...+..|+++ +
T Consensus 115 ~~~~~~g~~~~~~~~~~v~d~~-----------------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s 175 (306)
T 2p4o_A 115 DAIFLNGITPLSDTQYLTADSY-----------------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--K 175 (306)
T ss_dssp TCSCEEEEEESSSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--E
T ss_pred CccccCcccccCCCcEEEEECC-----------------CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--C
Confidence 1245677777777788887532 56899999875432211 1234568887 7
Q ss_pred cCCCEEEEEeCCCCEEEEEEecC-CCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhC
Q 023085 143 RDEDYVVVCESWKFRCRKYWLKG-ERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAY 221 (287)
Q Consensus 143 ~~~~~l~v~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (287)
++++.||++++..++|++|+.+. .++...+.+.. . ..|+++++|++|+||++...
T Consensus 176 ~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~-~~P~gi~vd~dG~l~va~~~---------------------- 231 (306)
T 2p4o_A 176 RFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-Q-TNIDDFAFDVEGNLYGATHI---------------------- 231 (306)
T ss_dssp EETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-S-CCCSSEEEBTTCCEEEECBT----------------------
T ss_pred cCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-c-CCCCCeEECCCCCEEEEeCC----------------------
Confidence 88999999999999999999874 33333444432 2 46999999999999999986
Q ss_pred CccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEEEEEe-----CCEEEEEecCC
Q 023085 222 PKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-----DNHLYVISLTS 278 (287)
Q Consensus 222 ~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~g~l~i~~~~~ 278 (287)
.+.|.+++++|+.......+.+ ...++++++. .++|||++..+
T Consensus 232 ------------~~~V~~~~~~G~~~~~~~~~~~--~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 232 ------------YNSVVRIAPDRSTTIIAQAEQG--VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp ------------TCCEEEECTTCCEEEEECGGGT--CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred ------------CCeEEEECCCCCEEEEeecccc--cCCceEEEEecccCCCCEEEEECCCC
Confidence 3589999999876543222222 3567888774 37999998753
No 10
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.87 E-value=5.1e-19 Score=148.18 Aligned_cols=221 Identities=17% Similarity=0.251 Sum_probs=163.6
Q ss_pred CCCCcEEEEe-cCCeEEEEE-CCceEEEEeeC--CccccCeEECCCCcEEEEeCC-CceEEEccCC-cEEEeeecCCccc
Q 023085 2 DKNGVIYTAT-RDGWIKRLQ-DGTWVNWKFID--SQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENFLSYVNGSKL 75 (287)
Q Consensus 2 d~~G~l~~~~-~~g~i~~~~-~~~~~~~~~~~--~~~~~~i~~d~dg~l~v~~~~-~gi~~~~~~g-~~~~~~~~~~~~~ 75 (287)
|++|.||+++ .+++|.+++ ++++..+..+. ..|. +++++++|++|+++.. ++|++++.++ ...+... ...
T Consensus 28 d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~~~~---~~~ 103 (300)
T 2qc5_A 28 SEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVM-CLIVSSLGDIWFTENGANKIGKLSKKGGFTEYPLP---QPD 103 (300)
T ss_dssp CTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTSCEEEEECS---STT
T ss_pred CCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcce-eEEECCCCCEEEEecCCCeEEEECCCCCeEEecCC---CCC
Confidence 6789999998 468999999 76666554332 4566 8999999999999864 5699999558 6544221 112
Q ss_pred cccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee--ccccccceEEEccCCCEEEEEeC
Q 023085 76 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYFANGVALSRDEDYVVVCES 153 (287)
Q Consensus 76 ~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~l~v~~~ 153 (287)
..|.+++++++|.+|+++.. .+.|++++++ +++..+. .....|.+++++++++ +|+++.
T Consensus 104 ~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~ 164 (300)
T 2qc5_A 104 SGPYGITEGLNGDIWFTQLN-----------------GDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTEN 164 (300)
T ss_dssp CCEEEEEECSTTCEEEEETT-----------------TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEET
T ss_pred CCCccceECCCCCEEEEccC-----------------CCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEec
Confidence 57889999999999997532 4689999988 7665442 2356789999999998 999998
Q ss_pred CCCEEEEEEecCCCCcceeEEec-cCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCC
Q 023085 154 WKFRCRKYWLKGERKGKLETFAE-NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLG 232 (287)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
..+.|++++.++ + ...+.. .....|.++++|++|+||+++..
T Consensus 165 ~~~~i~~~~~~g-~---~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~--------------------------------- 207 (300)
T 2qc5_A 165 QNNSIGRITNTG-K---LEEYPLPTNAAAPVGITSGNDGALWFVEIM--------------------------------- 207 (300)
T ss_dssp TTTEEEEECTTC-C---EEEEECSSTTCCEEEEEECTTSSEEEEETT---------------------------------
T ss_pred CCCeEEEECCCC-c---EEEeeCCCCCCCcceEEECCCCCEEEEccC---------------------------------
Confidence 788999998632 2 222221 12236889999999999999975
Q ss_pred CceEEEEECCCCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 233 GGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 233 ~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|.+++++++... +..+.+ ...+.+++.+ +|+||+++...+.|.+++.
T Consensus 208 -~~~i~~~~~~g~~~~-~~~~~~--~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 208 -GNKIGRITTTGEISE-YDIPTP--NARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp -TTEEEEECTTCCEEE-EECSST--TCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred -CCEEEEEcCCCcEEE-EECCCC--CCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 358999999776554 333322 3567888887 6899999998899999875
No 11
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.87 E-value=1.3e-19 Score=160.60 Aligned_cols=229 Identities=12% Similarity=0.093 Sum_probs=166.3
Q ss_pred CCcEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCC-----CceEEEccCC-cEEEeeecCCccc
Q 023085 4 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA-----NGLHKVSEDG-VENFLSYVNGSKL 75 (287)
Q Consensus 4 ~G~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~-----~gi~~~~~~g-~~~~~~~~~~~~~ 75 (287)
+|+||+++..++|.+++ ++....+......|. +++++++|+||+++.. .+++.++..+ ...-... ..+
T Consensus 152 ~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~-giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~---~~~ 227 (433)
T 4hw6_A 152 YDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCA-DVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSL---CNA 227 (433)
T ss_dssp TCEEEEECBTSCEEEEETTTTEEEEECCCCSCEE-EEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEE---EEC
T ss_pred CCEEEEEeCCCCEEEEECCCCEEEEeecCCCCcc-EEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccc---ccc
Confidence 58999998668999999 677766655556688 9999999999999863 3577777444 3210011 124
Q ss_pred cccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCee-EEeec--cccccceEEEccCCCEEEEE
Q 023085 76 RFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT-TLVAD--GFYFANGVALSRDEDYVVVC 151 (287)
Q Consensus 76 ~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~--~~~~~~~i~~~~~~~~l~v~ 151 (287)
..|+++++++ +|.||+++.. .+.|++++++++.+ ..+.. ....+.+++++|+++.||++
T Consensus 228 ~~P~giavd~~~G~lyv~d~~-----------------~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYH-----------------HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTT-----------------CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEE
T ss_pred CCCCEEEEeCCCCeEEEEECC-----------------CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEE
Confidence 6889999999 8999997533 56899999987766 33321 22345679999999999999
Q ss_pred eCCCCEEEEEEecC--CCCcceeEEecc--------------CCCCCcceee---------CCCCCEEEEEeccchhHHH
Q 023085 152 ESWKFRCRKYWLKG--ERKGKLETFAEN--------------LPGAPDNINL---------APDGTFWIAIIKLDARRMK 206 (287)
Q Consensus 152 ~~~~~~l~~~~~~~--~~~~~~~~~~~~--------------~~~~~~~i~~---------d~~G~lwv~~~~~~~~~~~ 206 (287)
+...++|++++.+. ..+.....+... ....|.++++ |++|+||++...
T Consensus 291 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~------- 363 (433)
T 4hw6_A 291 YNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRD------- 363 (433)
T ss_dssp ETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETT-------
T ss_pred eCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECC-------
Confidence 99999999999763 222222222211 1135888999 999999999976
Q ss_pred HhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEECC--------CC-----ccccceEEEEEe--CCEE
Q 023085 207 ILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDP--------TG-----QLMSFVTSGLQV--DNHL 271 (287)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~--------~~-----~~~~~~~~~~~~--~g~l 271 (287)
.+.|.+++++|......... +| ..++.+.+++.+ +|+|
T Consensus 364 ---------------------------n~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~l 416 (433)
T 4hw6_A 364 ---------------------------SHTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCF 416 (433)
T ss_dssp ---------------------------TTEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEE
T ss_pred ---------------------------CCEEEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEE
Confidence 35899999998665554321 11 135678999998 6999
Q ss_pred EEEecCCCeEEEEeCC
Q 023085 272 YVISLTSNFIGKVQLS 287 (287)
Q Consensus 272 ~i~~~~~~~i~~~~~~ 287 (287)
||+...+++|.++++.
T Consensus 417 yVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 417 YIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEGGGTEEEEEEEC
T ss_pred EEEeCCCCEEEEEecC
Confidence 9999999999999863
No 12
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.87 E-value=7.9e-19 Score=146.97 Aligned_cols=222 Identities=15% Similarity=0.254 Sum_probs=162.8
Q ss_pred CCCCCcEEEEec-CCeEEEEE-CCceEEEEee--CCccccCeEECCCCcEEEEeCC-CceEEEccCC-cEEEeeecCCcc
Q 023085 1 MDKNGVIYTATR-DGWIKRLQ-DGTWVNWKFI--DSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENFLSYVNGSK 74 (287)
Q Consensus 1 ~d~~G~l~~~~~-~g~i~~~~-~~~~~~~~~~--~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~~~g-~~~~~~~~~~~~ 74 (287)
+|++|.||+++. +++|.+++ ++++..+..+ ...|. +++++++|++|+++.. .+|++++.++ .+.+... ..
T Consensus 22 ~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~---~~ 97 (299)
T 2z2n_A 22 VSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVM-CLTISSDGEVWFTENAANKIGRITKKGIIKEYTLP---NP 97 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTSCEEEEECS---ST
T ss_pred ECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCcee-eEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCC---Cc
Confidence 378899999986 68899999 7666655432 34567 8999999999999864 5699999667 6554311 12
Q ss_pred ccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeec--cccccceEEEccCCCEEEEEe
Q 023085 75 LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--GFYFANGVALSRDEDYVVVCE 152 (287)
Q Consensus 75 ~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~l~v~~ 152 (287)
...|.+++++++|.+|+++.. .+.|+++++ ++++..+.. ....+++++++++++ +|+++
T Consensus 98 ~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~ 158 (299)
T 2z2n_A 98 DSAPYGITEGPNGDIWFTEMN-----------------GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA-LWFTE 158 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC-EEEEE
T ss_pred CCCceeeEECCCCCEEEEecC-----------------CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC-EEEEe
Confidence 357889999999999997422 468999998 466655432 345688999999986 89998
Q ss_pred CCCCEEEEEEecCCCCcceeEE-eccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccC
Q 023085 153 SWKFRCRKYWLKGERKGKLETF-AENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 231 (287)
Q Consensus 153 ~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
...+.|++++. ..+ ...+ .......|.++++|++|+||+++..
T Consensus 159 ~~~~~i~~~~~-~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-------------------------------- 202 (299)
T 2z2n_A 159 NQNNAIGRITE-SGD---ITEFKIPTPASGPVGITKGNDDALWFVEII-------------------------------- 202 (299)
T ss_dssp TTTTEEEEECT-TCC---EEEEECSSTTCCEEEEEECTTSSEEEEETT--------------------------------
T ss_pred CCCCEEEEEcC-CCc---EEEeeCCCCCCcceeEEECCCCCEEEEccC--------------------------------
Confidence 87789999986 322 2222 1112235889999999999999965
Q ss_pred CCceEEEEECCCCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 232 GGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 232 ~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
.++|.+++++++.. .+..+.. ...+.+++.+ +|+||+++...+.|.+++.
T Consensus 203 --~~~i~~~~~~g~~~-~~~~~~~--~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 203 --GNKIGRITTSGEIT-EFKIPTP--NARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp --TTEEEEECTTCCEE-EEECSST--TCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred --CceEEEECCCCcEE-EEECCCC--CCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 25899999966543 4544322 3567888886 6899999988899999875
No 13
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.86 E-value=4.9e-19 Score=148.29 Aligned_cols=219 Identities=16% Similarity=0.214 Sum_probs=160.6
Q ss_pred CCCCcEEEEec-CCeEEEEE-CCceEEEEee--CCccccCeEECCCCcEEEEeCC-CceEEEccCC-cEEEeeecCCccc
Q 023085 2 DKNGVIYTATR-DGWIKRLQ-DGTWVNWKFI--DSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENFLSYVNGSKL 75 (287)
Q Consensus 2 d~~G~l~~~~~-~g~i~~~~-~~~~~~~~~~--~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~~~g-~~~~~~~~~~~~~ 75 (287)
|++|.||+++. +++|.+++ +++...+..+ ...|. +++++++|++|+++.. .+|++++.++ ...+... ...
T Consensus 70 ~~~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~---~~~ 145 (300)
T 2qc5_A 70 SSLGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPY-GITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLP---NKG 145 (300)
T ss_dssp CTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECSTTCEEEEETTTTEEEEECTTSCEEEEECS---STT
T ss_pred CCCCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCc-cceECCCCCEEEEccCCCeEEEECCCCCEEEccCC---CCC
Confidence 67899999985 67899999 7666555433 24567 8999999999999864 5799999557 5544211 123
Q ss_pred cccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee--ccccccceEEEccCCCEEEEEeC
Q 023085 76 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYFANGVALSRDEDYVVVCES 153 (287)
Q Consensus 76 ~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~l~v~~~ 153 (287)
..|.+++++++|++|+++.. .+.|+++++ ++++..+. .....|.+++++++++ +|+++.
T Consensus 146 ~~~~~i~~d~~g~l~v~~~~-----------------~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~ 206 (300)
T 2qc5_A 146 SYPAFITLGSDNALWFTENQ-----------------NNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGA-LWFVEI 206 (300)
T ss_dssp CCEEEEEECTTSSEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEET
T ss_pred CCceeEEECCCCCEEEEecC-----------------CCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCC-EEEEcc
Confidence 57899999999999997532 467999998 46665543 2345788999999886 999998
Q ss_pred CCCEEEEEEecCCCCcceeEEe-ccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCC
Q 023085 154 WKFRCRKYWLKGERKGKLETFA-ENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLG 232 (287)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
..++|.+++.++ . ...+. ......|.++++|++|+||+++..
T Consensus 207 ~~~~i~~~~~~g-~---~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~--------------------------------- 249 (300)
T 2qc5_A 207 MGNKIGRITTTG-E---ISEYDIPTPNARPHAITAGKNSEIWFTEWG--------------------------------- 249 (300)
T ss_dssp TTTEEEEECTTC-C---EEEEECSSTTCCEEEEEECSTTCEEEEETT---------------------------------
T ss_pred CCCEEEEEcCCC-c---EEEEECCCCCCCceEEEECCCCCEEEeccC---------------------------------
Confidence 888999998632 2 22221 112245889999999999999965
Q ss_pred CceEEEEECCCCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 233 GGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 233 ~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
.++|.++++++... .+..+.+ ...+.++..+ +|+||+++. + .|.+|+.
T Consensus 250 -~~~i~~~~~~g~~~-~~~~~~~--~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 250 -ANQIGRITNDNTIQ-EYQLQTE--NAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp -TTEEEEECTTSCEE-EEECCST--TCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred -CCeEEEECCCCcEE-EEECCcc--CCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 25899999977554 4544432 3457788886 799999998 6 9999875
No 14
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=7.7e-19 Score=146.78 Aligned_cols=224 Identities=14% Similarity=0.232 Sum_probs=161.5
Q ss_pred CCCCCcEEEEe-cCCeEEEEE-CCceEE-EEee------CCccccCeEE-CCCCcEEEEeC--CCceEEEccCC--cEEE
Q 023085 1 MDKNGVIYTAT-RDGWIKRLQ-DGTWVN-WKFI------DSQTLVGLTS-TKEGHLIICDN--ANGLHKVSEDG--VENF 66 (287)
Q Consensus 1 ~d~~G~l~~~~-~~g~i~~~~-~~~~~~-~~~~------~~~~~~~i~~-d~dg~l~v~~~--~~gi~~~~~~g--~~~~ 66 (287)
++++|.||+++ .+++|.+|+ +++... +... ...|. ++++ +++|+||+++. ...|.+++.+| ...+
T Consensus 37 ~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~-~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~ 115 (286)
T 1q7f_A 37 VNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPN-RVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKF 115 (286)
T ss_dssp ECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEE-EEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEE
T ss_pred ECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCce-EEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEe
Confidence 36789999996 678999999 655433 2221 13566 8899 68999999985 46799998666 3333
Q ss_pred eeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee--ccccccceEEEccC
Q 023085 67 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYFANGVALSRD 144 (287)
Q Consensus 67 ~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~i~~~~~ 144 (287)
. ......|.+++++++|++|+++.. .+.|++++++...+..+. .....|++++++++
T Consensus 116 ~----~~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~ 174 (286)
T 1q7f_A 116 G----ATILQHPRGVTVDNKGRIIVVECK-----------------VMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDK 174 (286)
T ss_dssp C----TTTCSCEEEEEECTTSCEEEEETT-----------------TTEEEEECTTSCEEEEEECTTTCSSEEEEEECSS
T ss_pred c----CccCCCceEEEEeCCCCEEEEECC-----------------CCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCC
Confidence 1 122357899999999999997533 467999997644444443 33567899999999
Q ss_pred CCEEEEEeCCCCEEEEEEecCCCCcceeEEecc-CCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCc
Q 023085 145 EDYVVVCESWKFRCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 223 (287)
Q Consensus 145 ~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (287)
++ +|+++...++|.+|+.++. ....+... ....|.++++|++|+||++...
T Consensus 175 g~-l~v~~~~~~~i~~~~~~g~---~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~------------------------ 226 (286)
T 1q7f_A 175 QE-IFISDNRAHCVKVFNYEGQ---YLRQIGGEGITNYPIGVGINSNGEILIADNH------------------------ 226 (286)
T ss_dssp SE-EEEEEGGGTEEEEEETTCC---EEEEESCTTTSCSEEEEEECTTCCEEEEECS------------------------
T ss_pred CC-EEEEECCCCEEEEEcCCCC---EEEEEccCCccCCCcEEEECCCCCEEEEeCC------------------------
Confidence 86 9999988889999996542 12222211 1246899999999999999976
Q ss_pred cccccccCCCce-EEEEECCCCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeCC
Q 023085 224 LFSQFITLGGGA-HLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 224 ~~~~~~~~~~~~-~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~~ 287 (287)
.+ .|.+++++++.+..+..... ...+.++..+ +|+||+++. .++|.++++.
T Consensus 227 ----------~~~~i~~~~~~g~~~~~~~~~~~--~~~~~~i~~~~~g~l~vs~~-~~~v~v~~~~ 279 (286)
T 1q7f_A 227 ----------NNFNLTIFTQDGQLISALESKVK--HAQCFDVALMDDGSVVLASK-DYRLYIYRYV 279 (286)
T ss_dssp ----------SSCEEEEECTTSCEEEEEEESSC--CSCEEEEEEETTTEEEEEET-TTEEEEEECS
T ss_pred ----------CCEEEEEECCCCCEEEEEcccCC--CCcceeEEECCCCcEEEECC-CCeEEEEEcc
Confidence 23 89999999998888865322 2346677776 799999974 6899988863
No 15
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.86 E-value=7.5e-19 Score=147.11 Aligned_cols=220 Identities=15% Similarity=0.206 Sum_probs=160.3
Q ss_pred CCCCcEEEEec-CCeEEEEE-CCceEEEEee--CCccccCeEECCCCcEEEEeCC-CceEEEccCC-cEEEeeecCCccc
Q 023085 2 DKNGVIYTATR-DGWIKRLQ-DGTWVNWKFI--DSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENFLSYVNGSKL 75 (287)
Q Consensus 2 d~~G~l~~~~~-~g~i~~~~-~~~~~~~~~~--~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~~~g-~~~~~~~~~~~~~ 75 (287)
|++|.+|+++. +++|++++ ++++..+..+ ...|. +++++++|+||+++.. .+|++++.++ ...+... ...
T Consensus 65 ~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~---~~~ 140 (299)
T 2z2n_A 65 SSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPY-GITEGPNGDIWFTEMNGNRIGRITDDGKIREYELP---NKG 140 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTCCEEEEECS---STT
T ss_pred CCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCce-eeEECCCCCEEEEecCCceEEEECCCCCEEEecCC---CCC
Confidence 67899999985 68899999 7676655532 34567 8999999999999754 5799998766 5544221 123
Q ss_pred cccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee--ccccccceEEEccCCCEEEEEeC
Q 023085 76 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYFANGVALSRDEDYVVVCES 153 (287)
Q Consensus 76 ~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~l~v~~~ 153 (287)
..|++++++++|++|+++. ..+.|+++++ ++++..+. .....|.+++++++++ +|+++.
T Consensus 141 ~~~~~i~~~~~g~l~v~~~-----------------~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~ 201 (299)
T 2z2n_A 141 SYPSFITLGSDNALWFTEN-----------------QNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVEI 201 (299)
T ss_dssp CCEEEEEECTTSCEEEEET-----------------TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEET
T ss_pred CCCceEEEcCCCCEEEEeC-----------------CCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEcc
Confidence 4688999999999999742 2468999998 57766542 2345688999999987 899998
Q ss_pred CCCEEEEEEecCCCCcceeEEe-ccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCC
Q 023085 154 WKFRCRKYWLKGERKGKLETFA-ENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLG 232 (287)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
..++|.+++. ..+ ...+. ......|.++++|++|+||+++..
T Consensus 202 ~~~~i~~~~~-~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--------------------------------- 244 (299)
T 2z2n_A 202 IGNKIGRITT-SGE---ITEFKIPTPNARPHAITAGAGIDLWFTEWG--------------------------------- 244 (299)
T ss_dssp TTTEEEEECT-TCC---EEEEECSSTTCCEEEEEECSTTCEEEEETT---------------------------------
T ss_pred CCceEEEECC-CCc---EEEEECCCCCCCceeEEECCCCCEEEeccC---------------------------------
Confidence 7889999987 322 22221 112246889999999999999865
Q ss_pred CceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEeC
Q 023085 233 GGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 233 ~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 286 (287)
.++|.++++++. +..+..+.+ ...+.++...+++||+++. ++.|.+++.
T Consensus 245 -~~~i~~~d~~g~-~~~~~~~~~--~~~~~~i~~~~g~l~v~~~-~~~l~~~~~ 293 (299)
T 2z2n_A 245 -ANKIGRLTSNNI-IEEYPIQIK--SAEPHGICFDGETIWFAME-CDKIGKLTL 293 (299)
T ss_dssp -TTEEEEEETTTE-EEEEECSSS--SCCEEEEEECSSCEEEEET-TTEEEEEEE
T ss_pred -CceEEEECCCCc-eEEEeCCCC--CCccceEEecCCCEEEEec-CCcEEEEEc
Confidence 258999998764 455554432 2346666667799999986 678888874
No 16
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.86 E-value=8.7e-19 Score=149.79 Aligned_cols=221 Identities=17% Similarity=0.175 Sum_probs=159.0
Q ss_pred CcEEEEe-cCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCCCceEEEc-cCC-cEEEeeecCCccccccc
Q 023085 5 GVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFAN 79 (287)
Q Consensus 5 G~l~~~~-~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~ 79 (287)
+.+|+.+ .+++|++++ +++...+. .+..+. +++++++|++|+++ ..+|++++ .+| ++.+.....+.+...++
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~-~i~~~~dg~l~v~~-~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~ 137 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASGRKTVHA-LPFMGS-ALAKISDSKQLIAS-DDGLFLRDTATGVLTLHAELESDLPGNRSN 137 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEE-EEEEEETTEEEEEE-TTEEEEEETTTCCEEEEECSSTTCTTEEEE
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEE-CCCcce-EEEEeCCCeEEEEE-CCCEEEEECCCCcEEEEeeCCCCCCCCCCC
Confidence 5666555 678999999 45554443 234455 88999999999998 56899999 677 66654322222335688
Q ss_pred eEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCCCEEE
Q 023085 80 DVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCR 159 (287)
Q Consensus 80 ~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~ 159 (287)
+++++++|++|+++.... .....+.|++++ . +++..+......+++++++++++.+|++++..++|+
T Consensus 138 ~i~~d~~G~l~v~~~~~~-----------~~~~~~~l~~~~-~-g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~ 204 (326)
T 2ghs_A 138 DGRMHPSGALWIGTMGRK-----------AETGAGSIYHVA-K-GKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLM 204 (326)
T ss_dssp EEEECTTSCEEEEEEETT-----------CCTTCEEEEEEE-T-TEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred CEEECCCCCEEEEeCCCc-----------CCCCceEEEEEe-C-CcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEE
Confidence 999999999999753200 011246899999 4 777666555567899999999999999998888999
Q ss_pred EEEec--CC-CCcceeEEec--cCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCc
Q 023085 160 KYWLK--GE-RKGKLETFAE--NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGG 234 (287)
Q Consensus 160 ~~~~~--~~-~~~~~~~~~~--~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
+|+.+ ++ .+...+.+.. ...+.|+++++|++|+||+++.. .
T Consensus 205 ~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~----------------------------------~ 250 (326)
T 2ghs_A 205 RVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG----------------------------------E 250 (326)
T ss_dssp EEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEET----------------------------------T
T ss_pred EEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeC----------------------------------C
Confidence 99985 33 3333333322 13356899999999999999975 2
Q ss_pred eEEEEECCCCcEEEEEECCCCccccceEEEEEe---CCEEEEEecCCC
Q 023085 235 AHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV---DNHLYVISLTSN 279 (287)
Q Consensus 235 ~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~g~l~i~~~~~~ 279 (287)
++|.+++++++.+..+..+. ..++++++. .+.|||++..++
T Consensus 251 ~~v~~~d~~g~~~~~i~~~~----~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 251 GAVDRYDTDGNHIARYEVPG----KQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp TEEEEECTTCCEEEEEECSC----SBEEEEEEESTTSCEEEEEEBCTT
T ss_pred CEEEEECCCCCEEEEEECCC----CCcEEEEEecCCCCEEEEEecCCC
Confidence 58999999998888887653 246777764 368999988763
No 17
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.84 E-value=1.6e-18 Score=153.65 Aligned_cols=229 Identities=12% Similarity=0.100 Sum_probs=165.2
Q ss_pred CCcEEEEecCCeEEEEE-C-CceEEEEeeCCccccCeEECCCCc-EEEEeCCC-----ceEEEccCC-cEEEeeecCCcc
Q 023085 4 NGVIYTATRDGWIKRLQ-D-GTWVNWKFIDSQTLVGLTSTKEGH-LIICDNAN-----GLHKVSEDG-VENFLSYVNGSK 74 (287)
Q Consensus 4 ~G~l~~~~~~g~i~~~~-~-~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~~-----gi~~~~~~g-~~~~~~~~~~~~ 74 (287)
+|.||+++..++|.+++ + +....+......|. +++++++|+ ||+++... .++.+++++ +...... ..
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~-~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l---~~ 224 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVR-TICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITEL---TK 224 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEE-EEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEE---EE
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcc-eEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeee---cc
Confidence 58999998768999999 4 45556655556788 999999997 99998632 466666555 3311111 02
Q ss_pred ccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee--ccccccceEEEccCCCEEEEE
Q 023085 75 LRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYFANGVALSRDEDYVVVC 151 (287)
Q Consensus 75 ~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~l~v~ 151 (287)
+..|+++++++ +|.||+++.. .+.|++++++++....+. .....|++++++|+++.||++
T Consensus 225 ~~~p~giavdp~~g~lyv~d~~-----------------~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 225 GQNCNGAETHPINGELYFNSWN-----------------AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp CSSCCCEEECTTTCCEEEEETT-----------------TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred CCCceEEEEeCCCCEEEEEECC-----------------CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEE
Confidence 46789999999 8999998643 568999999866653332 233579999999999999999
Q ss_pred eCCCCEEEEEEecCC--CCcceeEEecc--------------CCCCCc-ceee--------CCCCCEEEEEeccchhHHH
Q 023085 152 ESWKFRCRKYWLKGE--RKGKLETFAEN--------------LPGAPD-NINL--------APDGTFWIAIIKLDARRMK 206 (287)
Q Consensus 152 ~~~~~~l~~~~~~~~--~~~~~~~~~~~--------------~~~~~~-~i~~--------d~~G~lwv~~~~~~~~~~~ 206 (287)
+...++|++++.++. .+.....+... ....|. ++++ |++|+||++...
T Consensus 288 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~------- 360 (430)
T 3tc9_A 288 VVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRE------- 360 (430)
T ss_dssp ETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGG-------
T ss_pred ECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECC-------
Confidence 999999999998742 12112222211 112466 7887 567999999987
Q ss_pred HhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEECC--------CC-----ccccceEEEEEe--CCEE
Q 023085 207 ILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDP--------TG-----QLMSFVTSGLQV--DNHL 271 (287)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~--------~~-----~~~~~~~~~~~~--~g~l 271 (287)
...|.+++++|......... +| ..++.+.+++.+ +++|
T Consensus 361 ---------------------------n~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~l 413 (430)
T 3tc9_A 361 ---------------------------NHCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECF 413 (430)
T ss_dssp ---------------------------GTEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEE
T ss_pred ---------------------------CcEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEE
Confidence 35899999999766665431 12 135678999997 4999
Q ss_pred EEEecCCCeEEEEeCC
Q 023085 272 YVISLTSNFIGKVQLS 287 (287)
Q Consensus 272 ~i~~~~~~~i~~~~~~ 287 (287)
||+...+++|.+++++
T Consensus 414 yVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 414 FIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEGGGTEEEEEEEC
T ss_pred EEEECCCCeEEEEccC
Confidence 9999999999999864
No 18
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.84 E-value=5.7e-19 Score=168.05 Aligned_cols=223 Identities=14% Similarity=0.189 Sum_probs=161.0
Q ss_pred CCCCcEEEEecCCeEEEEE--CCceEEEEeeC---------CccccCeEECCCCc-EEEEeCCCceEEEc-cCC-cEEEe
Q 023085 2 DKNGVIYTATRDGWIKRLQ--DGTWVNWKFID---------SQTLVGLTSTKEGH-LIICDNANGLHKVS-EDG-VENFL 67 (287)
Q Consensus 2 d~~G~l~~~~~~g~i~~~~--~~~~~~~~~~~---------~~~~~~i~~d~dg~-l~v~~~~~gi~~~~-~~g-~~~~~ 67 (287)
|++|.||+||.+++|.+++ ++.+..+.... .... +++.|++|+ ||+++...||++++ .++ ++.+.
T Consensus 365 d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~ 443 (795)
T 4a2l_A 365 DKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK-AVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFN 443 (795)
T ss_dssp CTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE-EEEEETTTTEEEEEETTTEEEEEETTTCCEEEEC
T ss_pred CCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE-EEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEee
Confidence 6789999999998999999 56676664221 2234 788899999 99999878999999 566 66664
Q ss_pred eecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeecc-----c--cccceEE
Q 023085 68 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-----F--YFANGVA 140 (287)
Q Consensus 68 ~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----~--~~~~~i~ 140 (287)
......+...+.+++.|++|+||++ +. ++|++++++++++..+... + .....+.
T Consensus 444 ~~~~~l~~~~v~~i~~d~~g~lwig------------------t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 504 (795)
T 4a2l_A 444 QRNSQLVNENVYAILPDGEGNLWLG------------------TL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLF 504 (795)
T ss_dssp TTTSCCSCSCEEEEEECSSSCEEEE------------------ES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEE
T ss_pred cCCCCcCCCeeEEEEECCCCCEEEE------------------ec-CceeEEeCCCCeEEEccccccccccCCceEEEEE
Confidence 3222233356788999999999995 22 5799999988887765432 1 2345677
Q ss_pred EccCCCEEEEEeCCCCEEEEEEecCCCCcceeEE-e-cc-CCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHH
Q 023085 141 LSRDEDYVVVCESWKFRCRKYWLKGERKGKLETF-A-EN-LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHV 217 (287)
Q Consensus 141 ~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~-~-~~-~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~ 217 (287)
.+++|+ +|++.. ++|++++.++.+. ..... . .. .......++.|++|+||+++..
T Consensus 505 ~d~~g~-lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~------------------ 562 (795)
T 4a2l_A 505 RDSHKR-LWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE------------------ 562 (795)
T ss_dssp ECTTCC-EEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS------------------
T ss_pred ECCCCC-EEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC------------------
Confidence 788887 899875 5799999765332 11100 0 00 1123456888999999999976
Q ss_pred HHhCCccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 218 LAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
+|++++++.+.+..+...+|+..+.+.++.++ +|+||+++. +.|.+++.
T Consensus 563 ------------------Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~--~Gl~~~~~ 612 (795)
T 4a2l_A 563 ------------------GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLSTN--RGISCFNP 612 (795)
T ss_dssp ------------------CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEET--TEEEEEET
T ss_pred ------------------CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEcC--CceEEEcC
Confidence 89999998888888877777766778888887 699999994 45666653
No 19
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.83 E-value=2.1e-17 Score=145.51 Aligned_cols=229 Identities=14% Similarity=0.103 Sum_probs=159.7
Q ss_pred CCCCCcEEEEe-cCCeEEEEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeCCC--ceEEEcc-CC-cEEEeeecCC
Q 023085 1 MDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNAN--GLHKVSE-DG-VENFLSYVNG 72 (287)
Q Consensus 1 ~d~~G~l~~~~-~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~~--gi~~~~~-~g-~~~~~~~~~~ 72 (287)
+|++|.||+++ .+++|.+++ ++....+......+ .++++++|+ ||+++... .|++++. .+ ..........
T Consensus 138 ~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~--~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~ 215 (409)
T 3hrp_A 138 AVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGG--KPAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGS 215 (409)
T ss_dssp ECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBC--BCEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCT
T ss_pred EeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCC--ceeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccc
Confidence 47889999998 458999999 45666555443333 288999985 78877543 6999984 44 3222111111
Q ss_pred ccccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe----eccc--cccc-eEEEccC
Q 023085 73 SKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV----ADGF--YFAN-GVALSRD 144 (287)
Q Consensus 73 ~~~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~~~~--~~~~-~i~~~~~ 144 (287)
.....|+++++++ +|.||+++ ..+.|++++++++....+ .... ..|. +++++|+
T Consensus 216 ~~~~~p~~iav~p~~g~lyv~d------------------~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~ 277 (409)
T 3hrp_A 216 TFSGKIGAVALDETEEWLYFVD------------------SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFV 277 (409)
T ss_dssp TSCSCCCBCEECTTSSEEEEEC------------------TTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETT
T ss_pred hhcCCcEEEEEeCCCCeEEEEE------------------CCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCC
Confidence 1346789999999 78999964 245799999987665544 1111 1244 9999997
Q ss_pred CCEEEEEeCCCCEEEEEEecCCCCcceeEEecc--------------CCCCCcceeeCCCCCEEEEEe-ccchhHHHHhh
Q 023085 145 EDYVVVCESWKFRCRKYWLKGERKGKLETFAEN--------------LPGAPDNINLAPDGTFWIAII-KLDARRMKILN 209 (287)
Q Consensus 145 ~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~--------------~~~~~~~i~~d~~G~lwv~~~-~~~~~~~~~~~ 209 (287)
++.||+++...++|++++.++. ...+... ....|.++++|++|+||++.. .
T Consensus 278 ~g~lyv~d~~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~---------- 343 (409)
T 3hrp_A 278 DSNFYMSDQNLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK---------- 343 (409)
T ss_dssp TTEEEEEETTTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT----------
T ss_pred CCEEEEEeCCCCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC----------
Confidence 7789999999999999987642 1112111 123599999999999999987 6
Q ss_pred cchhHHHHHHhCCccccccccCCCceEEEEEC-CCCcEEEEEECC------CC----ccccceEEEEEe-CCEEEEEecC
Q 023085 210 SSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDP------TG----QLMSFVTSGLQV-DNHLYVISLT 277 (287)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~------~~----~~~~~~~~~~~~-~g~l~i~~~~ 277 (287)
...|.+++ ++|........+ +| ..++.+.+++.+ +++|||+...
T Consensus 344 ------------------------~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~ 399 (409)
T 3hrp_A 344 ------------------------GYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAW 399 (409)
T ss_dssp ------------------------TCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEEST
T ss_pred ------------------------CCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECC
Confidence 35899999 667654444321 11 125678999997 5999999999
Q ss_pred CCeEEEEeCC
Q 023085 278 SNFIGKVQLS 287 (287)
Q Consensus 278 ~~~i~~~~~~ 287 (287)
+++|.++.++
T Consensus 400 n~~Ir~i~~e 409 (409)
T 3hrp_A 400 GKAIRKYAVE 409 (409)
T ss_dssp TCEEEEEEEC
T ss_pred CCeEEEEEeC
Confidence 9999999864
No 20
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.82 E-value=2.2e-18 Score=163.70 Aligned_cols=225 Identities=12% Similarity=0.141 Sum_probs=156.7
Q ss_pred CCCCcEEEEecCCeEEEEE--CCceEEEEee----------CCccccCeEECCCCcEEEEeCCCceEEEcc-CC-cEEEe
Q 023085 2 DKNGVIYTATRDGWIKRLQ--DGTWVNWKFI----------DSQTLVGLTSTKEGHLIICDNANGLHKVSE-DG-VENFL 67 (287)
Q Consensus 2 d~~G~l~~~~~~g~i~~~~--~~~~~~~~~~----------~~~~~~~i~~d~dg~l~v~~~~~gi~~~~~-~g-~~~~~ 67 (287)
|++|.||+|+.+++|.+++ .+.+..+... ..... +++.|++|+||+++...||+++++ ++ .+.+.
T Consensus 321 D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~ 399 (781)
T 3v9f_A 321 DSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVS-SVCDDGQGKLWIGTDGGGINVFENGKRVAIYNK 399 (781)
T ss_dssp CSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEE-EEEECTTSCEEEEEBSSCEEEEETTEEEEECC-
T ss_pred eCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceE-EEEEcCCCCEEEEeCCCcEEEEECCCCeEEEcc
Confidence 7889999999889999999 4566655321 11233 788899999999997789999994 44 44332
Q ss_pred eecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeecc---ccccceEEEccC
Q 023085 68 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG---FYFANGVALSRD 144 (287)
Q Consensus 68 ~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~~~~~i~~~~~ 144 (287)
. ....+...+.+++.|++|.||++ +..++|+++++++++++.+... ......++.+++
T Consensus 400 ~-~~~~~~~~v~~i~~d~~g~lWig------------------t~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~ 460 (781)
T 3v9f_A 400 E-NRELLSNSVLCSLKDSEGNLWFG------------------TYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKN 460 (781)
T ss_dssp -----CCCSBEEEEEECTTSCEEEE------------------ETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTT
T ss_pred C-CCCCCCcceEEEEECCCCCEEEE------------------eccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCC
Confidence 1 11223356788999999999995 2346899999988887766432 223455666776
Q ss_pred CCEEEEEeCCCCEEEEEEecCCCCcceeEEec--cCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCC
Q 023085 145 EDYVVVCESWKFRCRKYWLKGERKGKLETFAE--NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYP 222 (287)
Q Consensus 145 ~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (287)
++ ||++.. ..|.+++..+.+......... .....+..++.|++|+||+++..
T Consensus 461 g~-lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~----------------------- 514 (781)
T 3v9f_A 461 KK-IWIGTH--AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG----------------------- 514 (781)
T ss_dssp SE-EEEEET--TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS-----------------------
T ss_pred CC-EEEEEC--CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC-----------------------
Confidence 75 899875 679999976533322111000 01234567889999999999984
Q ss_pred ccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEe
Q 023085 223 KLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQ 285 (287)
Q Consensus 223 ~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~ 285 (287)
++|++++++++.+..+..+.+...+.+.++.++ +|+||+++. ++-|.+++
T Consensus 515 ------------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d 565 (781)
T 3v9f_A 515 ------------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPS 565 (781)
T ss_dssp ------------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESC
T ss_pred ------------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEEC
Confidence 379999999888888876666666778888886 799999997 33326554
No 21
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.81 E-value=6.3e-19 Score=167.44 Aligned_cols=220 Identities=12% Similarity=0.085 Sum_probs=156.0
Q ss_pred CCCCcEEEEecCCeEEEEE--CCceEEEEee----CCccccCeEECCCCcEEEEeCCCceEEEc-cCC-cEEEeeecCCc
Q 023085 2 DKNGVIYTATRDGWIKRLQ--DGTWVNWKFI----DSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFLSYVNGS 73 (287)
Q Consensus 2 d~~G~l~~~~~~g~i~~~~--~~~~~~~~~~----~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g-~~~~~~~~~~~ 73 (287)
|++|.||+||.+++|++++ ++.+..+... ..... +++.|++|+||+++...||++++ .++ ++.+... ..
T Consensus 371 d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~-~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~--~~ 447 (781)
T 3v9f_A 371 DGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVL-CSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELE--KN 447 (781)
T ss_dssp CTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEE-EEEECTTSCEEEEETTEEEEEECSSSCEEEECCST--TT
T ss_pred cCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceE-EEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccC--CC
Confidence 6789999999888999999 3334333211 12334 78889999999999777999999 556 6554321 22
Q ss_pred cccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeecc------ccccceEEEccCCCE
Q 023085 74 KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG------FYFANGVALSRDEDY 147 (287)
Q Consensus 74 ~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~~~ 147 (287)
+...+.+++.|++|.||++ +. ++|++++++++++..+... ......++.+++|+
T Consensus 448 ~~~~v~~i~~d~~g~lwig------------------t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~- 507 (781)
T 3v9f_A 448 ELLDVRVFYEDKNKKIWIG------------------TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGR- 507 (781)
T ss_dssp CCCCEEEEEECTTSEEEEE------------------ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCC-
T ss_pred CCCeEEEEEECCCCCEEEE------------------EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCC-
Confidence 3356788999999999995 22 5799999987776655322 12345677888887
Q ss_pred EEEEeCCCCEEEEEEecCCCCcceeEEecc--C-CCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCcc
Q 023085 148 VVVCESWKFRCRKYWLKGERKGKLETFAEN--L-PGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 224 (287)
Q Consensus 148 l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~--~-~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (287)
||++.. ++.|++++.++. +...+... . ......++.|++|+||+++..
T Consensus 508 lWigt~-~~Gl~~~~~~~~---~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~------------------------- 558 (781)
T 3v9f_A 508 FWIGTF-GGGVGIYTPDMQ---LVRKFNQYEGFCSNTINQIYRSSKGQMWLATGE------------------------- 558 (781)
T ss_dssp EEEEES-SSCEEEECTTCC---EEEEECTTTTCSCSCEEEEEECTTSCEEEEETT-------------------------
T ss_pred EEEEEc-CCCEEEEeCCCC---eEEEccCCCCCCCCeeEEEEECCCCCEEEEECC-------------------------
Confidence 898875 346999886432 23333211 1 123456888999999999986
Q ss_pred ccccccCCCceEE-EEECCCCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 225 FSQFITLGGGAHL-IHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 225 ~~~~~~~~~~~~v-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
++ ++++++.+.+..+...+|+..+.+.+++++ +|+||+++..| |.+|+.
T Consensus 559 -----------Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~G--l~~~~~ 609 (781)
T 3v9f_A 559 -----------GLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTNTG--ISCYIT 609 (781)
T ss_dssp -----------EEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECSSC--EEEEET
T ss_pred -----------CceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcCCc--eEEEEC
Confidence 67 999998777888877777766778888887 79999998544 776653
No 22
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.81 E-value=4e-18 Score=145.80 Aligned_cols=231 Identities=14% Similarity=0.163 Sum_probs=155.7
Q ss_pred CCCCCcEEEEecCC-------------------------eEEEEE--CCceEEEEee--CCccccCeEECCCCcEEEEeC
Q 023085 1 MDKNGVIYTATRDG-------------------------WIKRLQ--DGTWVNWKFI--DSQTLVGLTSTKEGHLIICDN 51 (287)
Q Consensus 1 ~d~~G~l~~~~~~g-------------------------~i~~~~--~~~~~~~~~~--~~~~~~~i~~d~dg~l~v~~~ 51 (287)
+|++|+||++...+ .|++++ +++....... ...|. +++++++|+||+++.
T Consensus 31 ~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~-gia~d~~g~l~v~d~ 109 (329)
T 3fvz_A 31 LDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPH-GLSIDTDGNYWVTDV 109 (329)
T ss_dssp ECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEE-EEEECTTSCEEEEET
T ss_pred ECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCce-EEEECCCCCEEEEEC
Confidence 47899999998544 589998 4766443321 23677 999999999999986
Q ss_pred C-CceEEEccCC-cEEEeee-c------CCccccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeC
Q 023085 52 A-NGLHKVSEDG-VENFLSY-V------NGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP 121 (287)
Q Consensus 52 ~-~gi~~~~~~g-~~~~~~~-~------~~~~~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 121 (287)
. +.|.+++.+| ...+... . ....+..|++|++++ +|.+|+++.. ..+.|.++++
T Consensus 110 ~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~----------------~~~~I~~~~~ 173 (329)
T 3fvz_A 110 ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY----------------CNSRIVQFSP 173 (329)
T ss_dssp TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS----------------SCCEEEEECT
T ss_pred CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC----------------CCCeEEEEcC
Confidence 6 5688888665 3222111 0 012355799999998 8999998641 2467899986
Q ss_pred CCCeeE-Eee----------ccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEec-cCCCCCcceeeCC
Q 023085 122 SSNITT-LVA----------DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE-NLPGAPDNINLAP 189 (287)
Q Consensus 122 ~~~~~~-~~~----------~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~d~ 189 (287)
+ +++. .+. ..+..|.+++++|++..||+++..+++|.+|+.++++. ...+.. .....+.++++.+
T Consensus 174 ~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~--~~~~~~~~~~~~~~~~~~~p 250 (329)
T 3fvz_A 174 S-GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF--VREIKHASFGRNVFAISYIP 250 (329)
T ss_dssp T-SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEEECCTTTTTCEEEEEEET
T ss_pred C-CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE--EEEEeccccCCCcceeeecC
Confidence 6 5443 332 12355999999999667999999999999999863221 112211 1112344444444
Q ss_pred ------CCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEEC-CCCcEEEEEECCCCccccceE
Q 023085 190 ------DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVT 262 (287)
Q Consensus 190 ------~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~~~~~~~~~ 262 (287)
+|++|++... ...+..++ ..|+.+..+.... ..+..+.
T Consensus 251 g~~~~~~g~~~v~~~~----------------------------------~~~v~~~~~~~g~~~~~~~~~~-~~~~~p~ 295 (329)
T 3fvz_A 251 GFLFAVNGKPYFGDQE----------------------------------PVQGFVMNFSSGEIIDVFKPVR-KHFDMPH 295 (329)
T ss_dssp TEEEEEECCCCTTCSC----------------------------------CCCEEEEETTTCCEEEEECCSS-SCCSSEE
T ss_pred CEEEEeCCCEEeccCC----------------------------------CcEEEEEEcCCCeEEEEEcCCC-CccCCee
Confidence 5555544433 34677787 4588887775322 2356788
Q ss_pred EEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 263 SGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 263 ~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
+++.+ +|+||+++..+++|.+|++
T Consensus 296 ~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 296 DIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp EEEECTTSEEEEEESSSCCEEEEEE
T ss_pred EEEECCCCCEEEEECCCCEEEEEeC
Confidence 89887 6899999999999999986
No 23
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.80 E-value=7.8e-18 Score=160.24 Aligned_cols=217 Identities=14% Similarity=0.164 Sum_probs=152.5
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCceEEEEee-----CCccccCeEECCCCcEEEEeCCCceEEEc-cCC-cEEEeeec-
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTWVNWKFI-----DSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFLSYV- 70 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~~~~~~~-----~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g-~~~~~~~~- 70 (287)
|++|. ||+|+.+++|++++ ++++..+... ..... .++.|++|+||+++. .||++++ .++ ++.+....
T Consensus 414 d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~ 491 (795)
T 4a2l_A 414 DEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVY-AILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKD 491 (795)
T ss_dssp ETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEE-EEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTT
T ss_pred cCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeE-EEEECCCCCEEEEec-CceeEEeCCCCeEEEcccccc
Confidence 57889 99999988999999 5677666431 12334 788999999999997 7999999 566 65543221
Q ss_pred -CCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeec-----cc--cccceEEEc
Q 023085 71 -NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-----GF--YFANGVALS 142 (287)
Q Consensus 71 -~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----~~--~~~~~i~~~ 142 (287)
.......+.++..|++|++|++. . ++|++++++++++ .+.. .+ .....++.+
T Consensus 492 ~~~~~~~~i~~i~~d~~g~lWigt------------------~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d 551 (795)
T 4a2l_A 492 GTPVVSKQITTLFRDSHKRLWIGG------------------E-EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEA 551 (795)
T ss_dssp CCBCCCCCEEEEEECTTCCEEEEE------------------S-SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEEC
T ss_pred ccccCCceEEEEEECCCCCEEEEe------------------C-CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEEC
Confidence 11223467889999999999952 2 5799999877766 4321 11 123456777
Q ss_pred cCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCC----CcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHH
Q 023085 143 RDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGA----PDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVL 218 (287)
Q Consensus 143 ~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~ 218 (287)
++|+ ||++... +|.+|+.++. +...+. ...+. ..+++.|++|+||+++..
T Consensus 552 ~~g~-lWigT~~--Gl~~~d~~~~---~~~~~~-~~~gl~~~~i~~i~~d~~g~lWi~t~~------------------- 605 (795)
T 4a2l_A 552 SNGI-IWVGTRE--GFYCFNEKDK---QIKRYN-TTNGLPNNVVYGILEDSFGRLWLSTNR------------------- 605 (795)
T ss_dssp TTSC-EEEEESS--CEEEEETTTT---EEEEEC-GGGTCSCSCEEEEEECTTSCEEEEETT-------------------
T ss_pred CCCC-EEEEeCC--CceeECCCCC---cEEEeC-CCCCCchhheEEEEECCCCCEEEEcCC-------------------
Confidence 8887 8888753 7999996543 233332 22233 345788999999999976
Q ss_pred HhCCccccccccCCCceEEEEECCCCcEEEEEECCCCccccce--EEEEEe-CCEEEEEecCCCeEEEEe
Q 023085 219 AAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFV--TSGLQV-DNHLYVISLTSNFIGKVQ 285 (287)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~-~g~l~i~~~~~~~i~~~~ 285 (287)
+|.+++|+...+..|...+|+..+.. .+++.+ +|+||+|+..| +.+|+
T Consensus 606 -----------------Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~G--l~~~~ 656 (795)
T 4a2l_A 606 -----------------GISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGING--ITTFR 656 (795)
T ss_dssp -----------------EEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEETTE--EEEEC
T ss_pred -----------------ceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEEecCCc--eEEEc
Confidence 89999999888888887778755544 344554 79999999865 44443
No 24
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.78 E-value=3e-16 Score=135.29 Aligned_cols=220 Identities=13% Similarity=0.116 Sum_probs=159.9
Q ss_pred CCCcEEEEecCCeEEEEE-CC-ceEEEEeeCCccccCeEECC-CCcEEEEeCC-CceEEEccCC--cEEEeeecCCcccc
Q 023085 3 KNGVIYTATRDGWIKRLQ-DG-TWVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--VENFLSYVNGSKLR 76 (287)
Q Consensus 3 ~~G~l~~~~~~g~i~~~~-~~-~~~~~~~~~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~~~g--~~~~~~~~~~~~~~ 76 (287)
+++.|+++.. ..|.+++ ++ ..+........|. ++++|+ +++||+++.. +.|++++.+| .+.+... .+.
T Consensus 43 ~~~~ll~~~~-~~I~~i~~~g~~~~~~~~~~~~~~-~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~----~~~ 116 (349)
T 3v64_C 43 PEPVLLFANR-IDIRQVLPHRSEYTLLLNNLENAI-ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST----GLE 116 (349)
T ss_dssp SCCEEEEECB-SCEEEECTTSCCEEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS----SCS
T ss_pred cCceeEeecc-cceEEEeCCCCeeEEeecCCCceE-EEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC----CCC
Confidence 4567788754 4689988 44 4444444455677 999994 6789999865 4688898555 4554321 235
Q ss_pred ccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccccccceEEEccCCCEEEEEeCC
Q 023085 77 FANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYVVVCESW 154 (287)
Q Consensus 77 ~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~l~v~~~~ 154 (287)
.|.++++|. .+.||++|.. .+.|.+++++......+ ...+..|++++++|.++.||+++..
T Consensus 117 ~p~glavd~~~g~ly~~d~~-----------------~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~ 179 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWG 179 (349)
T ss_dssp CCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECS
T ss_pred CccEEEEecCCCeEEEEcCC-----------------CCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccC
Confidence 789999996 6789998644 45799998874433333 3456789999999988889999988
Q ss_pred C-CEEEEEEecCCCCcceeEEeccCCCCCcceeeCC-CCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCC
Q 023085 155 K-FRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLG 232 (287)
Q Consensus 155 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
. .+|+++++++.. ...+.......|++|++|+ +++||++...
T Consensus 180 ~~~~I~r~~~dG~~---~~~~~~~~~~~PnGla~d~~~~~lY~aD~~--------------------------------- 223 (349)
T 3v64_C 180 NTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAK--------------------------------- 223 (349)
T ss_dssp SSCEEEEEETTSCS---CEESCCSSCSCEEEEEEETTTTEEEEEETT---------------------------------
T ss_pred CCCEEEEEeCCCCC---cEEEEECCCCCcceEEEeCCCCEEEEEECC---------------------------------
Confidence 7 899999987532 2222222234699999995 6789999876
Q ss_pred CceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEe
Q 023085 233 GGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 285 (287)
Q Consensus 233 ~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 285 (287)
.+.|.+++.+|.....+... + ...+.++..++++||++...+++|.+++
T Consensus 224 -~~~I~~~~~dG~~~~~~~~~-~--~~~P~giav~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 224 -HHVIERANLDGSHRKAVISQ-G--LPHPFAITVFEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp -TTEEEEEETTSCSCEEEECS-S--CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred -CCEEEEEeCCCCceEEEEeC-C--CCCceEEEEECCEEEEecCCCCeEEEEE
Confidence 35899999998765555432 2 4567888888999999999999999987
No 25
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.78 E-value=5.9e-17 Score=139.36 Aligned_cols=229 Identities=14% Similarity=0.157 Sum_probs=151.6
Q ss_pred CCCCCcEEEEec---CC--eEEEEECCceEEEEee-------CCccccCeEECCCCcEEEEeCC------CceEEEc-cC
Q 023085 1 MDKNGVIYTATR---DG--WIKRLQDGTWVNWKFI-------DSQTLVGLTSTKEGHLIICDNA------NGLHKVS-ED 61 (287)
Q Consensus 1 ~d~~G~l~~~~~---~g--~i~~~~~~~~~~~~~~-------~~~~~~~i~~d~dg~l~v~~~~------~gi~~~~-~~ 61 (287)
++++|++|++.. ++ .|..+++++...+... ...|. ++++|++|+||+++.. ..|++++ .+
T Consensus 24 ~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~-gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~t 102 (343)
T 2qe8_A 24 LTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVL-GIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLN 102 (343)
T ss_dssp ECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEE-EEEECSSSEEEEEECHHHHTSCCEEEEEETTT
T ss_pred ECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEee-EEEEcCCCcEEEEcCCCCcCCCCeEEEEECCC
Confidence 357899999852 23 6787775554433211 13567 9999999999999854 5799999 66
Q ss_pred C-cEEEeee--cCCccccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeecc-----
Q 023085 62 G-VENFLSY--VNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG----- 132 (287)
Q Consensus 62 g-~~~~~~~--~~~~~~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----- 132 (287)
+ +...... ....+...++++++++ +|.+|+++.+. ...+.|+.+|+.+++...+...
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~--------------~~~~~i~v~d~~~g~~~r~~~~~~~~~ 168 (343)
T 2qe8_A 103 NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP--------------DDKAALIRVDLQTGLAARVLQGYPGIA 168 (343)
T ss_dssp TEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS--------------GGGCEEEEEETTTCCEEEECTTCTTTS
T ss_pred CeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc--------------CCCCeEEEEECCCCCEEEEecCCCccc
Confidence 7 3332221 1122234679999996 57899987531 0234566677655544332210
Q ss_pred -------------------------ccccceEEEccCCCEEEEEeCCCCEEEEEEecC---CCCcceeE---Ee-ccCCC
Q 023085 133 -------------------------FYFANGVALSRDEDYVVVCESWKFRCRKYWLKG---ERKGKLET---FA-ENLPG 180 (287)
Q Consensus 133 -------------------------~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~---~~~~~~~~---~~-~~~~~ 180 (287)
...+++++++|+++.||+++..+.+|++++.+. ......+. +. ....+
T Consensus 169 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g 248 (343)
T 2qe8_A 169 PEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKP 248 (343)
T ss_dssp CCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECC
T ss_pred ccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCC
Confidence 023689999999999999999888999998541 11111110 00 01224
Q ss_pred CCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEECCCCcccc
Q 023085 181 APDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMS 259 (287)
Q Consensus 181 ~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~~~~~~ 259 (287)
.|+++++|++|+||++... .+.|.++++ +|+.......+ ...
T Consensus 249 ~pdgia~d~~G~l~va~~~----------------------------------~~~V~~~d~~~G~~~~~~~~~---~~~ 291 (343)
T 2qe8_A 249 ICDGISIDKDHNIYVGDLA----------------------------------HSAIGVITSADRAYKLLVTDE---KLS 291 (343)
T ss_dssp SCSCEEECTTCCEEEEEGG----------------------------------GTEEEEEETTTTEEEEEEECG---GGS
T ss_pred CCceEEECCCCCEEEEccC----------------------------------CCeEEEEECCCCCEEEEEECC---cee
Confidence 6999999999999999987 368999999 77755554433 245
Q ss_pred ceEEEEEe-CCEEEEEecCCCeE
Q 023085 260 FVTSGLQV-DNHLYVISLTSNFI 281 (287)
Q Consensus 260 ~~~~~~~~-~g~l~i~~~~~~~i 281 (287)
.+++++++ +++||+++...+++
T Consensus 292 ~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 292 WTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp CEEEEEECTTSCEEEEECCGGGS
T ss_pred cCCeeEECCCCcEEEEeCccccc
Confidence 68888886 78999998755443
No 26
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.77 E-value=4.2e-16 Score=136.19 Aligned_cols=220 Identities=13% Similarity=0.116 Sum_probs=160.4
Q ss_pred CCCcEEEEecCCeEEEEE-C-CceEEEEeeCCccccCeEECC-CCcEEEEeCC-CceEEEccCC--cEEEeeecCCcccc
Q 023085 3 KNGVIYTATRDGWIKRLQ-D-GTWVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--VENFLSYVNGSKLR 76 (287)
Q Consensus 3 ~~G~l~~~~~~g~i~~~~-~-~~~~~~~~~~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~~~g--~~~~~~~~~~~~~~ 76 (287)
.++.|+++. ...|.+++ + +..+........|. ++++|+ +++||+++.. +.|++++.+| .+.+.. ..+.
T Consensus 86 ~~~~l~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~-gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~----~~~~ 159 (386)
T 3v65_B 86 PEPVLLFAN-RIDIRQVLPHRSEYTLLLNNLENAI-ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS----TGLE 159 (386)
T ss_dssp SCCEEEEEC-BSCEEEECTTSCCCEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC----SSCS
T ss_pred ccceeEeec-CccceeeccCCCcEEEEecCCCccE-EEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe----CCCC
Confidence 445677765 45799998 4 44555555556677 999995 6789999866 4688888555 444432 1235
Q ss_pred ccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccccccceEEEccCCCEEEEEeCC
Q 023085 77 FANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYVVVCESW 154 (287)
Q Consensus 77 ~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~l~v~~~~ 154 (287)
.|.++++|. .+.||+++.. .+.|.+++++......+ ...+..|++++++|.++.||+++..
T Consensus 160 ~p~glavd~~~g~lY~~d~~-----------------~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~ 222 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWG 222 (386)
T ss_dssp CCCCEEEETTTTEEEEEETT-----------------TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECS
T ss_pred CccEEEEEeCCCeEEEEcCC-----------------CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccC
Confidence 789999996 6789998644 45788888874433333 3456789999999988899999988
Q ss_pred C-CEEEEEEecCCCCcceeEEeccCCCCCcceeeCC-CCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCC
Q 023085 155 K-FRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLG 232 (287)
Q Consensus 155 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
. .+|+++++++.. ...+.......|++|++|+ +++||++...
T Consensus 223 ~~~~I~r~~~dG~~---~~~~~~~~~~~PnGlavd~~~~~lY~aD~~--------------------------------- 266 (386)
T 3v65_B 223 NTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAK--------------------------------- 266 (386)
T ss_dssp SSCEEEEEETTSCS---CEEEECSSCSCEEEEEEEGGGTEEEEEETT---------------------------------
T ss_pred CCCEEEEEeCCCCC---cEEEEECCCCCeeeEEEeCCCCEEEEEECC---------------------------------
Confidence 7 899999987532 2233322334699999995 6789999876
Q ss_pred CceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEe
Q 023085 233 GGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 285 (287)
Q Consensus 233 ~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 285 (287)
.+.|.+++.+|.....+... + ...+.++..+++.||++...+++|.+++
T Consensus 267 -~~~I~~~d~dG~~~~~~~~~-~--~~~P~giav~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 267 -HHVIERANLDGSHRKAVISQ-G--LPHPFAITVFEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp -TTEEEEECTTSCSCEEEECS-S--CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred -CCEEEEEeCCCCeeEEEEEC-C--CCCceEEEEECCEEEEeeCCCCeEEEEE
Confidence 35899999998765555432 2 4568888888999999999999999987
No 27
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.77 E-value=6.7e-16 Score=127.91 Aligned_cols=218 Identities=11% Similarity=0.124 Sum_probs=154.2
Q ss_pred cEEEEecCCeEEEEE-CCceE-------EEEeeCCccccCeEECCC-CcEEEEeCC-CceEEEccCC--cEEEeeecCCc
Q 023085 6 VIYTATRDGWIKRLQ-DGTWV-------NWKFIDSQTLVGLTSTKE-GHLIICDNA-NGLHKVSEDG--VENFLSYVNGS 73 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~-~~~~~-------~~~~~~~~~~~~i~~d~d-g~l~v~~~~-~gi~~~~~~g--~~~~~~~~~~~ 73 (287)
.||+++. +.|.+++ ++... ....+...|. ++++|++ ++||+++.. +.|++++.++ ...+.. .
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~-gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~----~ 76 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVII-GLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR----Q 76 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEE-EEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC----T
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEE-EEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE----C
Confidence 5788864 5899998 54321 2222334567 9999984 689999876 4689998555 444322 1
Q ss_pred cccccceEEEcCC-CcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee-ccccccceEEEccCCCEEEEE
Q 023085 74 KLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVC 151 (287)
Q Consensus 74 ~~~~~~~l~~d~~-g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~l~v~ 151 (287)
.+..|.+++++++ +.||+++.. .+.|.+++++......+. ..+..|++++++|+++.||++
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~ 139 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDSQ-----------------LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWT 139 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEE
T ss_pred CCCCccEEEEEecCCeEEEEECC-----------------CCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEE
Confidence 2357899999985 789998643 467899988643333332 345689999999988889999
Q ss_pred eCC--CCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCC-CCEEEEEeccchhHHHHhhcchhHHHHHHhCCcccccc
Q 023085 152 ESW--KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPD-GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQF 228 (287)
Q Consensus 152 ~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~-G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
+.. .++|+++++++.. ...+.......|.++++|++ ++||++...
T Consensus 140 ~~~~~~~~I~~~~~dg~~---~~~~~~~~~~~P~gia~d~~~~~lyv~d~~----------------------------- 187 (267)
T 1npe_A 140 DWNRDNPKIETSHMDGTN---RRILAQDNLGLPNGLTFDAFSSQLCWVDAG----------------------------- 187 (267)
T ss_dssp ECCSSSCEEEEEETTSCC---CEEEECTTCSCEEEEEEETTTTEEEEEETT-----------------------------
T ss_pred ECCCCCcEEEEEecCCCC---cEEEEECCCCCCcEEEEcCCCCEEEEEECC-----------------------------
Confidence 976 5789999976532 22222222346999999986 579999976
Q ss_pred ccCCCceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEeCC
Q 023085 229 ITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 229 ~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~~ 287 (287)
.+.|.++++++.....+.. + ...+.+++.++++||+++..+++|.+++.+
T Consensus 188 -----~~~I~~~~~~g~~~~~~~~--~--~~~P~gi~~d~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 188 -----THRAECLNPAQPGRRKVLE--G--LQYPFAVTSYGKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp -----TTEEEEEETTEEEEEEEEE--C--CCSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred -----CCEEEEEecCCCceEEEec--C--CCCceEEEEeCCEEEEEECCCCeEEEEeCC
Confidence 3589999998765554432 1 245677888899999999999999999863
No 28
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.75 E-value=1.6e-15 Score=128.89 Aligned_cols=220 Identities=9% Similarity=0.117 Sum_probs=156.7
Q ss_pred cEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECC-CCcEEEEeCC-CceEEEc-cC----C-cEEEeeecCCccc
Q 023085 6 VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVS-ED----G-VENFLSYVNGSKL 75 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~-~~----g-~~~~~~~~~~~~~ 75 (287)
.|++++. ..|.+++ .+...........|. ++++|+ +++||+++.. +.|++++ .. . .+.+.. ..+
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~~~~~p~-g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~----~~~ 76 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS----RDI 76 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEECSCSSEE-EEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC----SSC
T ss_pred EEEEECC-CeEEEEECCCcceEehhcCCCceE-EEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe----CCC
Confidence 4677754 4699999 344544444456778 999997 4689999866 5688888 43 2 233221 124
Q ss_pred cccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee-ccccccceEEEccCCCEEEEEeC
Q 023085 76 RFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCES 153 (287)
Q Consensus 76 ~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~l~v~~~ 153 (287)
..|.++++|. .++||++|.. .+.|.+++++....+.+. ..+..|++++++|+++.|||++.
T Consensus 77 ~~p~glavd~~~~~ly~~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~ 139 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDW 139 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEEC
T ss_pred CCcCEEEEeecCCeEEEEECC-----------------CCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEcc
Confidence 5789999995 6789998643 467899998744444333 35678999999998888999998
Q ss_pred CC-CEEEEEEecCCCCcceeEEeccCCCCCcceeeCC-CCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccC
Q 023085 154 WK-FRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 231 (287)
Q Consensus 154 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
.. ++|+++++++.. .+.+.......|+++++|+ +++||++...
T Consensus 140 ~~~~~I~~~~~dG~~---~~~~~~~~~~~P~gla~d~~~~~lY~~D~~-------------------------------- 184 (316)
T 1ijq_A 140 GTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSK-------------------------------- 184 (316)
T ss_dssp SSSCEEEEEETTSCC---EEEEECSSCSCEEEEEEETTTTEEEEEETT--------------------------------
T ss_pred CCCCeEEEEcCCCCC---eEEEEECCCCCceEEEEeccCCEEEEEECC--------------------------------
Confidence 65 799999986532 2233322334799999996 5789999876
Q ss_pred CCceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEeC
Q 023085 232 GGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 232 ~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|.+++.+|...+.+.... .....+.+++.++++||++...+++|.+++.
T Consensus 185 --~~~I~~~d~dg~~~~~~~~~~-~~~~~P~giav~~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 185 --LHSISSIDVNGGNRKTILEDE-KRLAHPFSLAVFEDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp --TTEEEEEETTSCSCEEEEECT-TTTSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred --CCeEEEEecCCCceEEEeecC-CccCCcEEEEEECCEEEEEECCCCeEEEEeC
Confidence 358999999987666554321 2245678888889999999999999999874
No 29
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.73 E-value=1.5e-15 Score=129.82 Aligned_cols=203 Identities=13% Similarity=0.072 Sum_probs=140.1
Q ss_pred CCCCcEEEEe-cCCeEEEEE--CCceEEEEeeCC------ccccCeEECCCCcEEEEeC--CCceEEEc-cCC-cEEEee
Q 023085 2 DKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDS------QTLVGLTSTKEGHLIICDN--ANGLHKVS-EDG-VENFLS 68 (287)
Q Consensus 2 d~~G~l~~~~-~~g~i~~~~--~~~~~~~~~~~~------~~~~~i~~d~dg~l~v~~~--~~gi~~~~-~~g-~~~~~~ 68 (287)
+++|.||+++ .++.|.+++ +++......... .|. ++++ .+++||+++. .+.|.++| .++ ......
T Consensus 92 ~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~-~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~ 169 (328)
T 3dsm_A 92 LSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTE-QMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELT 169 (328)
T ss_dssp EETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCC-CEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEE
T ss_pred eCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcc-eEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEE
Confidence 3578999998 789999999 556554444444 677 8988 5789999985 45799999 666 333222
Q ss_pred ecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeec--cccccceEEEccCCC
Q 023085 69 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--GFYFANGVALSRDED 146 (287)
Q Consensus 69 ~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~ 146 (287)
. ...|.+++++++|++|++.... +....| ....+.|+++|++++++..... ....|++++++|+++
T Consensus 170 ~-----g~~p~~i~~~~dG~l~v~~~~~-~~~~~~------~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~ 237 (328)
T 3dsm_A 170 I-----GIQPTSLVMDKYNKMWTITDGG-YEGSPY------GYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRD 237 (328)
T ss_dssp C-----SSCBCCCEECTTSEEEEEBCCB-CTTCSS------CBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSC
T ss_pred c-----CCCccceEEcCCCCEEEEECCC-ccCCcc------ccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCC
Confidence 1 1357899999999999985431 000000 0013689999998887654322 134789999999999
Q ss_pred EEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCC-CCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccc
Q 023085 147 YVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLF 225 (287)
Q Consensus 147 ~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (287)
.||+++. .|+++|.++.+.... .+.......|.++++|+ +|+||++....
T Consensus 238 ~lyv~~~---~v~~~d~~t~~~~~~-~~~~~~~~~p~gi~vdp~~g~lyva~~~~------------------------- 288 (328)
T 3dsm_A 238 TLYWINN---DIWRMPVEADRVPVR-PFLEFRDTKYYGLTVNPNNGEVYVADAID------------------------- 288 (328)
T ss_dssp EEEEESS---SEEEEETTCSSCCSS-CSBCCCSSCEEEEEECTTTCCEEEEECTT-------------------------
T ss_pred EEEEEcc---EEEEEECCCCceeee-eeecCCCCceEEEEEcCCCCeEEEEcccc-------------------------
Confidence 9999975 799999865443211 12211134699999998 78999998220
Q ss_pred cccccCCCceEEEEECCCCcEEEEEEC
Q 023085 226 SQFITLGGGAHLIHVAEDGTIIRNLVD 252 (287)
Q Consensus 226 ~~~~~~~~~~~v~~~~~~g~~~~~~~~ 252 (287)
-...+.|.+|+++|+.++.+..
T Consensus 289 -----y~~~~~V~v~d~~g~~~~~i~~ 310 (328)
T 3dsm_A 289 -----YQQQGIVYRYSPQGKLIDEFYV 310 (328)
T ss_dssp -----SSSEEEEEEECTTCCEEEEEEE
T ss_pred -----cccCCEEEEECCCCCEEEEEEe
Confidence 0014689999999999998875
No 30
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.73 E-value=1.4e-15 Score=125.60 Aligned_cols=192 Identities=15% Similarity=0.198 Sum_probs=136.3
Q ss_pred ccccCeEECCCCcEEE-EeCC-CceEEEccCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeec
Q 023085 33 QTLVGLTSTKEGHLII-CDNA-NGLHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILE 109 (287)
Q Consensus 33 ~~~~~i~~d~dg~l~v-~~~~-~gi~~~~~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~ 109 (287)
.|. +++++++|+||+ ++.. ++|.+++..+ ...... ......|.+++++++|++|+++
T Consensus 25 ~p~-~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~p~~i~~~~~g~l~v~~---------------- 84 (270)
T 1rwi_B 25 SPS-GVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLP---FNGLYQPQGLAVDGAGTVYVTD---------------- 84 (270)
T ss_dssp CEE-EEEECTTCCEEEEECSSSCEEEEECC-----EECC---CCSCCSCCCEEECTTCCEEEEE----------------
T ss_pred Ccc-ceEECCCCCEEEEccCCCCcEEEecCCCcccceEe---eCCcCCcceeEECCCCCEEEEc----------------
Confidence 677 899999999999 7543 5799998444 322211 1123578899999999999974
Q ss_pred cCCCceEEEEeCCCCeeEEee-ccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeC
Q 023085 110 GKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLA 188 (287)
Q Consensus 110 ~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d 188 (287)
. .+.|++++++++....+. .....|.+++++++++ +|+++...++|.+++..... ...........|.++++|
T Consensus 85 -~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~---~~~~~~~~~~~p~~i~~~ 158 (270)
T 1rwi_B 85 -F-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKT---QTVLPFTGLNDPDGVAVD 158 (270)
T ss_dssp -T-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCS---CEECCCCSCCSCCCEEEC
T ss_pred -C-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCce---eEeeccccCCCceeEEEe
Confidence 1 458999998765554433 3346789999999987 99999878899999643211 111111122368999999
Q ss_pred CCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEEEEEe-
Q 023085 189 PDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV- 267 (287)
Q Consensus 189 ~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~- 267 (287)
++|+||++... .+.|.++++++........ .+ ...+.+++.+
T Consensus 159 ~~g~l~v~~~~----------------------------------~~~i~~~~~~~~~~~~~~~-~~--~~~p~~i~~d~ 201 (270)
T 1rwi_B 159 NSGNVYVTDTD----------------------------------NNRVVKLEAESNNQVVLPF-TD--ITAPWGIAVDE 201 (270)
T ss_dssp TTCCEEEEEGG----------------------------------GTEEEEECTTTCCEEECCC-SS--CCSEEEEEECT
T ss_pred CCCCEEEEECC----------------------------------CCEEEEEecCCCceEeecc-cC--CCCceEEEECC
Confidence 99999999875 3589999998766554332 22 2567888887
Q ss_pred CCEEEEEecCCCeEEEEeCC
Q 023085 268 DNHLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 268 ~g~l~i~~~~~~~i~~~~~~ 287 (287)
+|+||+++..++.|.+++.+
T Consensus 202 ~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 202 AGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp TCCEEEEETTTSCEEEECTT
T ss_pred CCCEEEEECCCCcEEEEcCC
Confidence 68999999999999998753
No 31
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.72 E-value=3e-15 Score=131.36 Aligned_cols=220 Identities=10% Similarity=0.121 Sum_probs=157.6
Q ss_pred CcEEEEecCCeEEEEE-C-CceEEEEeeCCccccCeEECC-CCcEEEEeCC-CceEEEccCC------cEEEeeecCCcc
Q 023085 5 GVIYTATRDGWIKRLQ-D-GTWVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG------VENFLSYVNGSK 74 (287)
Q Consensus 5 G~l~~~~~~g~i~~~~-~-~~~~~~~~~~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~~~g------~~~~~~~~~~~~ 74 (287)
..|++++ ...|.+++ + ............+. ++++|+ +++||+++.. +.|++++.++ .+.+.. ..
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~-~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~----~~ 157 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS----RD 157 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCSCEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC----SS
T ss_pred ceeEEec-cceeEEEccCCcceeEeccccCcce-EEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe----CC
Confidence 3566664 46899998 4 44455544556777 999996 6789999866 4588887443 222221 12
Q ss_pred ccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccccccceEEEccCCCEEEEEe
Q 023085 75 LRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYVVVCE 152 (287)
Q Consensus 75 ~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~l~v~~ 152 (287)
+..|.+|++|. .++||++|.. .+.|.+++++......+ ...+..|.+|+++|.++.|||++
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~-----------------~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td 220 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTD 220 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETT-----------------TTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEE
T ss_pred CCCcccEEEEecCCceEEEECC-----------------CCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEe
Confidence 45789999997 6899998644 46899999875444433 34677899999999888899999
Q ss_pred CCC-CEEEEEEecCCCCcceeEEeccCCCCCcceeeCC-CCCEEEEEeccchhHHHHhhcchhHHHHHHhCCcccccccc
Q 023085 153 SWK-FRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFIT 230 (287)
Q Consensus 153 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
... .+|+++++++.. ...+.......|.+|++|+ +++||++...
T Consensus 221 ~~~~~~I~~~~~dG~~---~~~~~~~~l~~P~glavd~~~~~lY~aD~~------------------------------- 266 (400)
T 3p5b_L 221 WGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSK------------------------------- 266 (400)
T ss_dssp CSSSCCEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEETT-------------------------------
T ss_pred CCCCCEEEEEeCCCCc---cEEEEECCCCceEEEEEEeCCCEEEEEECC-------------------------------
Confidence 763 789999987532 2233322334799999995 6789999876
Q ss_pred CCCceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEe
Q 023085 231 LGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 285 (287)
Q Consensus 231 ~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 285 (287)
...|.+++.+|...+.+.... ..+..+.++..++++||++...+++|.+++
T Consensus 267 ---~~~I~~~d~dG~~~~~~~~~~-~~l~~P~gl~v~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 267 ---LHSISSIDVNGGNRKTILEDE-KRLAHPFSLAVFEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp ---TTEEEEEETTSCCCEEEEECS-STTSSEEEEEEETTEEEEEESSSCSEEEEE
T ss_pred ---CCEEEEEeCCCCccEEEEeCC-CCCCCCEEEEEeCCEEEEecCCCCeEEEEE
Confidence 358999999987666654322 235677888888999999999999999987
No 32
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.72 E-value=2.3e-15 Score=125.55 Aligned_cols=197 Identities=15% Similarity=0.225 Sum_probs=141.2
Q ss_pred ccccCeEECCCCcEEEEeCC-CceEEEccCC--cEEEeeec-CCccccccceEEE-cCCCcEEEEcCCCCCCCcceeeee
Q 023085 33 QTLVGLTSTKEGHLIICDNA-NGLHKVSEDG--VENFLSYV-NGSKLRFANDVVE-ASDGSLYFTVSSSKYLPHEYCLDI 107 (287)
Q Consensus 33 ~~~~~i~~d~dg~l~v~~~~-~gi~~~~~~g--~~~~~~~~-~~~~~~~~~~l~~-d~~g~l~v~~~~~~~~~~~~~~~~ 107 (287)
.|. +++++++|++|+++.. +.|.+++.++ ...+.... .......|.++++ +++|++|+++..
T Consensus 31 ~p~-~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~------------ 97 (286)
T 1q7f_A 31 EPS-GVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS------------ 97 (286)
T ss_dssp CEE-EEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG------------
T ss_pred CCc-eEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC------------
Confidence 466 8999999999999754 5699998556 44442211 1122457889999 588999997522
Q ss_pred eccCCCceEEEEeCCCCeeEEee-ccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEec-cCCCCCcce
Q 023085 108 LEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE-NLPGAPDNI 185 (287)
Q Consensus 108 ~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~i 185 (287)
..+.|.+++++...+..+. .....|++++++++++ +|+++...++|.+|+.++. ....+.. .....|.++
T Consensus 98 ----~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~---~~~~~~~~~~~~~p~~i 169 (286)
T 1q7f_A 98 ----PTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNGN---VLHKFGCSKHLEFPNGV 169 (286)
T ss_dssp ----GGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTSC---EEEEEECTTTCSSEEEE
T ss_pred ----CCCEEEEECCCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCCC---EEEEeCCCCccCCcEEE
Confidence 1457999996533333332 2345789999999997 9999988889999986432 1222221 122358999
Q ss_pred eeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEEEE
Q 023085 186 NLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGL 265 (287)
Q Consensus 186 ~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 265 (287)
++|++|++|++... .+.|.+++++++.+..+... +. ...+.+++
T Consensus 170 ~~~~~g~l~v~~~~----------------------------------~~~i~~~~~~g~~~~~~~~~-g~-~~~p~~i~ 213 (286)
T 1q7f_A 170 VVNDKQEIFISDNR----------------------------------AHCVKVFNYEGQYLRQIGGE-GI-TNYPIGVG 213 (286)
T ss_dssp EECSSSEEEEEEGG----------------------------------GTEEEEEETTCCEEEEESCT-TT-SCSEEEEE
T ss_pred EECCCCCEEEEECC----------------------------------CCEEEEEcCCCCEEEEEccC-Cc-cCCCcEEE
Confidence 99999999999865 35899999999888877643 22 35678888
Q ss_pred Ee-CCEEEEEecCCC-eEEEEeC
Q 023085 266 QV-DNHLYVISLTSN-FIGKVQL 286 (287)
Q Consensus 266 ~~-~g~l~i~~~~~~-~i~~~~~ 286 (287)
.+ +|+||+++..++ .|.+++.
T Consensus 214 ~d~~G~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 214 INSNGEILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp ECTTCCEEEEECSSSCEEEEECT
T ss_pred ECCCCCEEEEeCCCCEEEEEECC
Confidence 87 689999998886 9999874
No 33
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=5e-15 Score=131.73 Aligned_cols=226 Identities=12% Similarity=0.113 Sum_probs=158.5
Q ss_pred CCcEEEEec-CCeEEEEE--CCceEEEEeeC----CccccCeEE-------CCCCc-EEEEeCCC-------ceEEEc--
Q 023085 4 NGVIYTATR-DGWIKRLQ--DGTWVNWKFID----SQTLVGLTS-------TKEGH-LIICDNAN-------GLHKVS-- 59 (287)
Q Consensus 4 ~G~l~~~~~-~g~i~~~~--~~~~~~~~~~~----~~~~~~i~~-------d~dg~-l~v~~~~~-------gi~~~~-- 59 (287)
+++||++.. .++|.+++ ++....+.... ..|. +|++ +++|+ ||+++... .+++++
T Consensus 151 ~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~-~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~ 229 (496)
T 3kya_A 151 KDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIR-SIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRN 229 (496)
T ss_dssp EEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEE-EEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECC
T ss_pred CCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCc-EEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecC
Confidence 478999885 46788898 44555544332 2477 8999 99997 99998663 377776
Q ss_pred cCC-cE------EEeeecCCccccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCC-------CC
Q 023085 60 EDG-VE------NFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-------SN 124 (287)
Q Consensus 60 ~~g-~~------~~~~~~~~~~~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-------~~ 124 (287)
.+| +. .+. ....|+++++++ ++.||+++.. .+.|+++|++ ++
T Consensus 230 ~~G~~~~~~~~~~v~------~~~~p~giavdp~~g~LYvtd~~-----------------~g~V~r~d~~~~~~~~~tg 286 (496)
T 3kya_A 230 ADGTFDDRSDIQLIA------AYKQCNGATIHPINGELYFNSYE-----------------KGQVFRLDLVDYFKTIKNG 286 (496)
T ss_dssp TTSCCSTTSCEEEEE------EESCCCCEEECTTTCCEEEEETT-----------------TTEEEEECHHHHHHHHHTT
T ss_pred CCCceeecccceeec------cCCCceEEEEcCCCCeEEEEECC-----------------CCEEEEEecccccccccCc
Confidence 335 42 222 235789999998 6899998643 5679999986 45
Q ss_pred ee------------EEe--eccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCC--CcceeEEecc-----------
Q 023085 125 IT------------TLV--ADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGER--KGKLETFAEN----------- 177 (287)
Q Consensus 125 ~~------------~~~--~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~--~~~~~~~~~~----------- 177 (287)
.+ ..+ ......|.+++++|+++.||++++..++|++++.++.. +.....+...
T Consensus 287 ~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~ 366 (496)
T 3kya_A 287 GSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVG 366 (496)
T ss_dssp CCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBG
T ss_pred eeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcc
Confidence 43 111 12234678999999999999999999999999876531 1111222211
Q ss_pred ---CCCCCc-ceeeC-------CCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcE
Q 023085 178 ---LPGAPD-NINLA-------PDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTI 246 (287)
Q Consensus 178 ---~~~~~~-~i~~d-------~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~ 246 (287)
.-..|. +++.| ++|+|||+... ...|.+++++|..
T Consensus 367 ~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~----------------------------------N~rIr~i~~~G~v 412 (496)
T 3kya_A 367 TEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRL----------------------------------NFCVRKVTPEGIV 412 (496)
T ss_dssp GGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGG----------------------------------GTEEEEECTTCBE
T ss_pred cccccCCCeEEEEEccccccccCCCeEEEEECC----------------------------------CCEEEEEeCCCCE
Confidence 112477 77887 68999999987 3589999999966
Q ss_pred EEEEECC--------------CC-----ccccceEEEEEe-C-CEEEEEecCCCeEEEEeCC
Q 023085 247 IRNLVDP--------------TG-----QLMSFVTSGLQV-D-NHLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 247 ~~~~~~~--------------~~-----~~~~~~~~~~~~-~-g~l~i~~~~~~~i~~~~~~ 287 (287)
....... +| -.++.+.+++.+ + |+|||+...+++|.+++++
T Consensus 413 ~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 413 STYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp EEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECC
Confidence 5554321 22 135678999998 3 9999999999999999863
No 34
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.72 E-value=5.7e-16 Score=146.68 Aligned_cols=221 Identities=14% Similarity=0.191 Sum_probs=141.1
Q ss_pred CCCCcEEEEecCCeEEEEE--CC---ceEEEEee-------CCccccCeEECCCCcEEEEeCCCceEEEc-cCC-cEEEe
Q 023085 2 DKNGVIYTATRDGWIKRLQ--DG---TWVNWKFI-------DSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFL 67 (287)
Q Consensus 2 d~~G~l~~~~~~g~i~~~~--~~---~~~~~~~~-------~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g-~~~~~ 67 (287)
|++|.||+|+. +++.+++ ++ .+..+... ..... .+..|++|+||+++. .||.+++ .++ ++.+.
T Consensus 332 D~~g~lWiGt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lWigt~-~GL~~~~~~~~~~~~~~ 408 (758)
T 3ott_A 332 DSKGFYWFGGA-NGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIR-HIYEDKEQQLWIATD-GSINRYDYATRQFIHYN 408 (758)
T ss_dssp CTTCCEEEEET-TEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEE-EEEECTTSCEEEEET-TEEEEEETTTTEEEEEE
T ss_pred cCCCCEEEeeC-CcceeecccccccceeEEeccCCcCCCCCCCceE-EEEECCCCCEEEEeC-CcHhhcCcCCCcEEEee
Confidence 67899999995 5799998 22 23333211 11223 788899999999994 5999999 566 66654
Q ss_pred eecC-C-ccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCC------CeeE---Eee--ccc-
Q 023085 68 SYVN-G-SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS------NITT---LVA--DGF- 133 (287)
Q Consensus 68 ~~~~-~-~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~---~~~--~~~- 133 (287)
.... . .+...+.++..|++|+||++ +..++|+++++++ +.+. .+. ..+
T Consensus 409 ~~~~~~~~~~~~v~~i~~d~~g~lWig------------------T~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 470 (758)
T 3ott_A 409 IVDNTGTYNTNWTYYIFEDTAGQLWIS------------------TCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLS 470 (758)
T ss_dssp EECCC--CBSSSEEEEEECTTSEEEEE------------------ESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCS
T ss_pred cCCCcCCCCCceEEEEEEcCCCCEEEE------------------ECCCceEEEccccccccCCcceecccccccccccc
Confidence 2211 1 12345778999999999995 2335799998642 1221 111 111
Q ss_pred -cccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEecc-C--CCCCcceeeCCCCCEEEEEeccchhHHHHhh
Q 023085 134 -YFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN-L--PGAPDNINLAPDGTFWIAIIKLDARRMKILN 209 (287)
Q Consensus 134 -~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~ 209 (287)
.....+..+++|+ ||+......+|.+++.+.. +...+... . ...+..+..|++|+||+++..
T Consensus 471 ~~~i~~i~~d~~g~-lWi~~~t~~Gl~~~d~~~~---~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~~---------- 536 (758)
T 3ott_A 471 GMFINQIIPDNEGN-VWVLLYNNKGIDKINPRTR---EVTKLFADELTGEKSPNYLLCDEDGLLWVGFHG---------- 536 (758)
T ss_dssp CSCEEEEEECTTSC-EEEEETTCSSEEEEETTTT---EEEEECTTTSCGGGCEEEEEECTTSCEEEEETT----------
T ss_pred cceeeeEEEcCCCC-EEEEccCCCCcEEEeCCCC---ceEEecCCCcCCCcccceEEECCCCCEEEEecC----------
Confidence 1245577788887 8883222467999996543 23233211 1 124567889999999999965
Q ss_pred cchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEeC
Q 023085 210 SSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 286 (287)
+|.+++|+.+....+. .+++..+.+.++.+++|+||+++.. -|.+|+.
T Consensus 537 --------------------------Gl~~~~~~~~~~~~~~-~~gl~~~~i~~i~~~~g~lWi~t~~--Gl~~~~~ 584 (758)
T 3ott_A 537 --------------------------GVMRINPKDESQQSIS-FGSFSNNEILSMTCVKNSIWVSTTN--GLWIIDR 584 (758)
T ss_dssp --------------------------EEEEECC--CCCCBCC-CCC---CCEEEEEEETTEEEEEESS--CEEEEET
T ss_pred --------------------------ceEEEecCCCceEEec-ccCCCccceEEEEECCCCEEEECCC--CeEEEcC
Confidence 8999999876666654 3566566788888889999999954 4666653
No 35
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.71 E-value=1.3e-15 Score=144.26 Aligned_cols=213 Identities=16% Similarity=0.217 Sum_probs=138.8
Q ss_pred CCCCcEEEEecCCeEEEEE--CCceEEEEeeC-------CccccCeEECCCCcEEEEeCCCceEEEc-cCC-c---EEEe
Q 023085 2 DKNGVIYTATRDGWIKRLQ--DGTWVNWKFID-------SQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-V---ENFL 67 (287)
Q Consensus 2 d~~G~l~~~~~~g~i~~~~--~~~~~~~~~~~-------~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g-~---~~~~ 67 (287)
|++|.||+|| .++|.+++ ++++..+.... .... .+..|++|+||+++...||++++ .+. . ..+.
T Consensus 381 d~~g~lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~ 458 (758)
T 3ott_A 381 DKEQQLWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTY-YIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYI 458 (758)
T ss_dssp CTTSCEEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEE-EEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEE
T ss_pred CCCCCEEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEE-EEEEcCCCCEEEEECCCceEEEccccccccCCccee
Confidence 6789999999 46899999 56776665321 1223 68889999999999778999998 321 0 1121
Q ss_pred -----eecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeecc----ccccce
Q 023085 68 -----SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG----FYFANG 138 (287)
Q Consensus 68 -----~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~~~ 138 (287)
....+.+...+.++..|++|+||++. + ..++|++++++++++..+... ...++.
T Consensus 459 ~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~----------------~-t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~ 521 (758)
T 3ott_A 459 AEQNYSVHNGLSGMFINQIIPDNEGNVWVLL----------------Y-NNKGIDKINPRTREVTKLFADELTGEKSPNY 521 (758)
T ss_dssp CSEEECGGGTCSCSCEEEEEECTTSCEEEEE----------------T-TCSSEEEEETTTTEEEEECTTTSCGGGCEEE
T ss_pred cccccccccccccceeeeEEEcCCCCEEEEc----------------c-CCCCcEEEeCCCCceEEecCCCcCCCcccce
Confidence 11222333457889999999999921 1 235799999988887766321 123456
Q ss_pred EEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCC-CCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHH
Q 023085 139 VALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLP-GAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHV 217 (287)
Q Consensus 139 i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~ 217 (287)
+..+.+|+ ||++.. ++|.+|+.++....... . ..++ ..+.++..| +|+||+++..
T Consensus 522 i~~d~~g~-lWigt~--~Gl~~~~~~~~~~~~~~-~-~gl~~~~i~~i~~~-~g~lWi~t~~------------------ 577 (758)
T 3ott_A 522 LLCDEDGL-LWVGFH--GGVMRINPKDESQQSIS-F-GSFSNNEILSMTCV-KNSIWVSTTN------------------ 577 (758)
T ss_dssp EEECTTSC-EEEEET--TEEEEECC--CCCCBCC-C-CC---CCEEEEEEE-TTEEEEEESS------------------
T ss_pred EEECCCCC-EEEEec--CceEEEecCCCceEEec-c-cCCCccceEEEEEC-CCCEEEECCC------------------
Confidence 77787786 888863 57999997644332221 0 1111 224456665 8999999976
Q ss_pred HHhCCccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEEEEE-eCCEEEEEecCC
Q 023085 218 LAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQ-VDNHLYVISLTS 278 (287)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~i~~~~~ 278 (287)
+|.+++|+...+..+..++.. +. ..+.. .+|+||+|+..|
T Consensus 578 ------------------Gl~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~G~l~fG~~~G 618 (758)
T 3ott_A 578 ------------------GLWIIDRKTMDARQQNMTNKR-FT--SLLFDPKEDCVYLGGADG 618 (758)
T ss_dssp ------------------CEEEEETTTCCEEEC--CCCC-CS--EEEEETTTTEEEEECBSE
T ss_pred ------------------CeEEEcCCCceeEEecCCCCc-ee--eeEEECCCCcEEEecCCc
Confidence 899999987777777654432 22 23333 379999998764
No 36
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.70 E-value=1.1e-14 Score=137.39 Aligned_cols=220 Identities=9% Similarity=0.106 Sum_probs=157.1
Q ss_pred CcEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECC-CCcEEEEeCCC-ceEEEccCC------cEEEeeecCCcc
Q 023085 5 GVIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTK-EGHLIICDNAN-GLHKVSEDG------VENFLSYVNGSK 74 (287)
Q Consensus 5 G~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~-dg~l~v~~~~~-gi~~~~~~g------~~~~~~~~~~~~ 74 (287)
..|+++. ...|.+++ ......+......+. +++++. +++||+++... .|++++.+| .+.+. ...
T Consensus 396 p~Ll~an-~~~Ir~i~l~~~~~~~l~~~~~~~~-gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi----~~~ 469 (791)
T 3m0c_C 396 AYLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI----SRD 469 (791)
T ss_dssp CEEEEEC-BSSEEEECTTSCCCEEEECSCSSEE-EEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE----CSS
T ss_pred ccccccc-ccceeEeeccCCcceeeecCCCceE-EEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE----ecC
Confidence 4566664 34688887 344455554555677 899997 67899998764 578877443 12222 123
Q ss_pred ccccceEEEcCC-CcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccccccceEEEccCCCEEEEEe
Q 023085 75 LRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYVVVCE 152 (287)
Q Consensus 75 ~~~~~~l~~d~~-g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~l~v~~ 152 (287)
+..|.+|++|.. ++||++|.. .+.|.+++++....+.+ ...+..|.+|+++|.++.|||++
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~-----------------~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD 532 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTD 532 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred CCCcceeeeeecCCcEEEEecC-----------------CCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEec
Confidence 468899999975 489998644 46899999874444433 34677899999999888899999
Q ss_pred CCC-CEEEEEEecCCCCcceeEEeccCCCCCcceeeCC-CCCEEEEEeccchhHHHHhhcchhHHHHHHhCCcccccccc
Q 023085 153 SWK-FRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFIT 230 (287)
Q Consensus 153 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
... .+|.++++++. ....+.......|.+|++|. +++||++...
T Consensus 533 ~g~~~~I~~~~~dG~---~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~------------------------------- 578 (791)
T 3m0c_C 533 WGTPAKIKKGGLNGV---DIYSLVTENIQWPNGITLDLLSGRLYWVDSK------------------------------- 578 (791)
T ss_dssp CSSSCEEEEEETTSC---CEEEEECSSCSCEEEEEEETTTTEEEEEETT-------------------------------
T ss_pred CCCCCeEEEEecCCC---ceEEEEeCCCCCceEEEEecCCCeEEEEeCC-------------------------------
Confidence 765 78999998753 22333333334799999994 7889999876
Q ss_pred CCCceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEe
Q 023085 231 LGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 285 (287)
Q Consensus 231 ~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 285 (287)
...|.+++.+|.....+.... ..+..+.++...+++||++....+.|.+++
T Consensus 579 ---~~~I~~~d~dG~~~~~v~~~~-~~l~~P~glav~~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 579 ---LHSISSIDVNGGNRKTILEDE-KRLAHPFSLAVFEDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp ---TTEEEEEETTSCSCEEEEECT-TTTSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ---CCcEEEEecCCCceEEEecCC-CccCCCCEEEEeCCEEEEEECCCCEEEEEe
Confidence 358999999987666654322 235667888888899999999999999986
No 37
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.70 E-value=1.8e-14 Score=122.50 Aligned_cols=221 Identities=10% Similarity=0.049 Sum_probs=156.9
Q ss_pred CCCcEEEEecCCeEEEEE-CCc---eEEEEeeCCccccCeEECC-CCcEEEEeCC-CceEEEccCC--c-EEEeeecCCc
Q 023085 3 KNGVIYTATRDGWIKRLQ-DGT---WVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--V-ENFLSYVNGS 73 (287)
Q Consensus 3 ~~G~l~~~~~~g~i~~~~-~~~---~~~~~~~~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~~~g--~-~~~~~~~~~~ 73 (287)
++..|+++. ...|.+++ ++. ..........+. ++.+++ +++||+++.. +.|++++.+| . +.+...
T Consensus 3 ~~p~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~-~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~---- 76 (318)
T 3sov_A 3 SAPLLLYAN-RRDLRLVDATNGKENATIVVGGLEDAA-AVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS---- 76 (318)
T ss_dssp -CCEEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEE-EEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE----
T ss_pred CccEEEEEc-cCeEEEEECCCCceEEEEEecCCCccE-EEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC----
Confidence 345688875 45799998 443 223322333556 778886 5789999866 4588888554 2 232221
Q ss_pred cccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee-ccccccceEEEccCCCEEEEE
Q 023085 74 KLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVC 151 (287)
Q Consensus 74 ~~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~l~v~ 151 (287)
.+..|.++++|. .+.||++|.. .+.|.+++++....+.+. ..+..|++++++|.++.||++
T Consensus 77 ~l~~p~glavd~~~g~ly~~d~~-----------------~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~t 139 (318)
T 3sov_A 77 GLLSPDGLACDWLGEKLYWTDSE-----------------TNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWT 139 (318)
T ss_dssp CCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEE
T ss_pred CCCCccEEEEEcCCCeEEEEECC-----------------CCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEE
Confidence 235789999995 7899998643 467999998744333333 567789999999988889999
Q ss_pred eCC-CCEEEEEEecCCCCcceeEEeccCCCCCcceeeCC-CCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccc
Q 023085 152 ESW-KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFI 229 (287)
Q Consensus 152 ~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
+.. ..+|+++++++.. ...+.......|++|++|+ +++||++...
T Consensus 140 d~~~~~~I~r~~~dG~~---~~~~~~~~l~~Pnglavd~~~~~lY~aD~~------------------------------ 186 (318)
T 3sov_A 140 DWGEVPKIERAGMDGSS---RFIIINSEIYWPNGLTLDYEEQKLYWADAK------------------------------ 186 (318)
T ss_dssp ECSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEETT------------------------------
T ss_pred ecCCCCEEEEEEcCCCC---eEEEEECCCCCccEEEEeccCCEEEEEECC------------------------------
Confidence 965 5899999987532 2223322234699999997 6789999876
Q ss_pred cCCCceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEeC
Q 023085 230 TLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 230 ~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|.+++.+|...+.+... . ...+.+++.+++.||++...+++|.+++.
T Consensus 187 ----~~~I~~~d~dG~~~~~~~~~-~--~~~P~glav~~~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 187 ----LNFIHKSNLDGTNRQAVVKG-S--LPHPFALTLFEDILYWTDWSTHSILACNK 236 (318)
T ss_dssp ----TTEEEEEETTSCSCEEEECS-C--CSCEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred ----CCEEEEEcCCCCceEEEecC-C--CCCceEEEEeCCEEEEEecCCCeEEEEEC
Confidence 35899999998766665531 1 45688888889999999999999999875
No 38
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.69 E-value=2.9e-14 Score=121.01 Aligned_cols=205 Identities=16% Similarity=0.222 Sum_probs=140.0
Q ss_pred CCcEEEEecCCeEEEEE-CCceEEEEeeCCccccCeEECCCCcEEEEeCCCceEEEccCC-c-EEEeeecCCccccccce
Q 023085 4 NGVIYTATRDGWIKRLQ-DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVSEDG-V-ENFLSYVNGSKLRFAND 80 (287)
Q Consensus 4 ~G~l~~~~~~g~i~~~~-~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~~~g-~-~~~~~~~~~~~~~~~~~ 80 (287)
+|.||+++.+++|++++ +++..............++++++|+||+++...+|++++..| . ..+. . ....+..
T Consensus 107 ~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~-~----~~~~~~~ 181 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFK-T----NDAITSA 181 (330)
T ss_dssp TTEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEE-C----SSCCCSC
T ss_pred CCEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEe-c----CCCceee
Confidence 68899999999999999 644432222222222278889999999998767999999447 3 2322 1 1234567
Q ss_pred EEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-eeccccccceEEEccCCCEEEEEeCCCCEEE
Q 023085 81 VVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFYFANGVALSRDEDYVVVCESWKFRCR 159 (287)
Q Consensus 81 l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~ 159 (287)
++++++|.+|++ + ++|+++++ +++... ..........+++++++. +|++.. ++.|+
T Consensus 182 ~~~d~~g~l~v~------------------t--~~l~~~d~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~-~~gl~ 238 (330)
T 3hxj_A 182 ASIGKDGTIYFG------------------S--DKVYAINP-DGTEKWNFYAGYWTVTRPAISEDGT-IYVTSL-DGHLY 238 (330)
T ss_dssp CEECTTCCEEEE------------------S--SSEEEECT-TSCEEEEECCSSCCCSCCEECTTSC-EEEEET-TTEEE
T ss_pred eEEcCCCEEEEE------------------e--CEEEEECC-CCcEEEEEccCCcceeceEECCCCe-EEEEcC-CCeEE
Confidence 788999999995 2 67999994 454332 222223456777888776 888865 56899
Q ss_pred EEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEE
Q 023085 160 KYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIH 239 (287)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 239 (287)
+++.++.. ...+. .....+..+++|++|+||+++.. ++|++
T Consensus 239 ~~~~~g~~---~~~~~-~~~~~~~~~~~~~~g~l~v~t~~-----------------------------------ggl~~ 279 (330)
T 3hxj_A 239 AINPDGTE---KWRFK-TGKRIESSPVIGNTDTIYFGSYD-----------------------------------GHLYA 279 (330)
T ss_dssp EECTTSCE---EEEEE-CSSCCCSCCEECTTSCEEEECTT-----------------------------------CEEEE
T ss_pred EECCCCCE---eEEee-CCCCccccceEcCCCeEEEecCC-----------------------------------CCEEE
Confidence 99743321 22222 22234556888999999999976 58999
Q ss_pred ECCCCcEEEEEECCCCccccceEEEEE-eCCEEEEEecCCC
Q 023085 240 VAEDGTIIRNLVDPTGQLMSFVTSGLQ-VDNHLYVISLTSN 279 (287)
Q Consensus 240 ~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~i~~~~~~ 279 (287)
++++|+.+..+..+. ..+.++.. .+|+||+++..|-
T Consensus 280 ~d~~g~~~~~~~~~~----~~~~~~~~d~~g~l~~gt~~G~ 316 (330)
T 3hxj_A 280 INPDGTEKWNFETGS----WIIATPVIDENGTIYFGTRNGK 316 (330)
T ss_dssp ECTTSCEEEEEECSS----CCCSCCEECTTCCEEEECTTSC
T ss_pred ECCCCcEEEEEEcCC----ccccceEEcCCCEEEEEcCCCe
Confidence 999999888887543 24556666 4799999987654
No 39
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.69 E-value=1.3e-14 Score=123.89 Aligned_cols=224 Identities=7% Similarity=-0.014 Sum_probs=150.7
Q ss_pred CCcEEEEec-CCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEe-CCCceEEEc-cCC-cEEEeeecC-Ccccc
Q 023085 4 NGVIYTATR-DGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICD-NANGLHKVS-EDG-VENFLSYVN-GSKLR 76 (287)
Q Consensus 4 ~G~l~~~~~-~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~-~~~gi~~~~-~~g-~~~~~~~~~-~~~~~ 76 (287)
++.+|+++. ++.|..++ +++..........|. +++++++|++|+++ ....|.++| .++ +........ .....
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~-~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~ 131 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPR-YIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESG 131 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEE-EEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTC
T ss_pred CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCc-EEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCC
Confidence 468999884 57899999 566543333446777 99998899999998 556799999 666 443222111 11123
Q ss_pred ccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCC-
Q 023085 77 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK- 155 (287)
Q Consensus 77 ~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~- 155 (287)
.|.+|++ .++.+|+++.+ ..+.|..+|+.++++.........|++++++++|+ +|++....
T Consensus 132 ~p~~i~~-~~~~lyv~~~~----------------~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~-l~v~~~~~~ 193 (328)
T 3dsm_A 132 STEQMVQ-YGKYVYVNCWS----------------YQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNK-MWTITDGGY 193 (328)
T ss_dssp BCCCEEE-ETTEEEEEECT----------------TCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSE-EEEEBCCBC
T ss_pred CcceEEE-ECCEEEEEcCC----------------CCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCC-EEEEECCCc
Confidence 6788888 57899997531 24689999998888655444456789999999997 88887654
Q ss_pred ---------CEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCC-CEEEEEeccchhHHHHhhcchhHHHHHHhCCccc
Q 023085 156 ---------FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLF 225 (287)
Q Consensus 156 ---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (287)
+.|.++|.++.+.. ..+.......|.+++++++| .||++..
T Consensus 194 ~~~~~~~~~~~v~~id~~t~~v~--~~~~~~~g~~p~~la~~~d~~~lyv~~~--------------------------- 244 (328)
T 3dsm_A 194 EGSPYGYEAPSLYRIDAETFTVE--KQFKFKLGDWPSEVQLNGTRDTLYWINN--------------------------- 244 (328)
T ss_dssp TTCSSCBCCCEEEEEETTTTEEE--EEEECCTTCCCEEEEECTTSCEEEEESS---------------------------
T ss_pred cCCccccCCceEEEEECCCCeEE--EEEecCCCCCceeEEEecCCCEEEEEcc---------------------------
Confidence 78999997543211 12211112369999999876 5777543
Q ss_pred cccccCCCceEEEEECCCCcEEEEEE-CCCCccccceEEEEEe--CCEEEEEe----cCCCeEEEEeCC
Q 023085 226 SQFITLGGGAHLIHVAEDGTIIRNLV-DPTGQLMSFVTSGLQV--DNHLYVIS----LTSNFIGKVQLS 287 (287)
Q Consensus 226 ~~~~~~~~~~~v~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~--~g~l~i~~----~~~~~i~~~~~~ 287 (287)
.|+++|++...+.... .+.+ ...+.+++.+ +++||+++ ..++.|.+|+.+
T Consensus 245 ----------~v~~~d~~t~~~~~~~~~~~~--~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 245 ----------DIWRMPVEADRVPVRPFLEFR--DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp ----------SEEEEETTCSSCCSSCSBCCC--SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred ----------EEEEEECCCCceeeeeeecCC--CCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 4678887643322111 1111 2457888885 69999999 778899999864
No 40
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.67 E-value=1.4e-14 Score=124.76 Aligned_cols=172 Identities=12% Similarity=0.139 Sum_probs=124.7
Q ss_pred CCCcEEEEe-cCCeEEEEE-CCc-eEEEEe-eCCccccCeEECC-CCcEEEEeCC-CceEEEccCC--cEEEeeecCCcc
Q 023085 3 KNGVIYTAT-RDGWIKRLQ-DGT-WVNWKF-IDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--VENFLSYVNGSK 74 (287)
Q Consensus 3 ~~G~l~~~~-~~g~i~~~~-~~~-~~~~~~-~~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~~~g--~~~~~~~~~~~~ 74 (287)
.++.||+++ .+++|++++ ++. .+.+.. ....|. ++++|+ .|+||+++.. +.|.+++.+| .+.+.. ..
T Consensus 83 ~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~----~~ 157 (349)
T 3v64_C 83 RRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW----QS 157 (349)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----TT
T ss_pred cccEEEEEeccCCceEEEecCCCCceEEEeCCCCCcc-EEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe----CC
Confidence 467899987 678999999 543 333332 234677 999996 6789999866 4688888666 444432 12
Q ss_pred ccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccccccceEEEccCCCEEEEEe
Q 023085 75 LRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYVVVCE 152 (287)
Q Consensus 75 ~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~l~v~~ 152 (287)
+..|++|++|+ +|.||++|.. ..+.|++++++....+.+ ...+..|+|++++++++.|||++
T Consensus 158 l~~P~~iavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD 221 (349)
T 3v64_C 158 LEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVD 221 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCCcceEEEecCcCeEEEeccC----------------CCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEE
Confidence 46789999997 6789998644 136899999874333333 34577899999999888999999
Q ss_pred CCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 153 SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 153 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
...++|.++++++. ..+.+.......|.+++++ +++||++...
T Consensus 222 ~~~~~I~~~~~dG~---~~~~~~~~~~~~P~giav~-~~~ly~td~~ 264 (349)
T 3v64_C 222 AKHHVIERANLDGS---HRKAVISQGLPHPFAITVF-EDSLYWTDWH 264 (349)
T ss_dssp TTTTEEEEEETTSC---SCEEEECSSCSSEEEEEEE-TTEEEEEETT
T ss_pred CCCCEEEEEeCCCC---ceEEEEeCCCCCceEEEEE-CCEEEEecCC
Confidence 99999999998753 2233332334579999995 6789999987
No 41
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.66 E-value=4.2e-14 Score=120.17 Aligned_cols=171 Identities=17% Similarity=0.163 Sum_probs=123.0
Q ss_pred CCcEEEEe-cCCeEEEEE-CCce---EEEEeeCCccccCeEECC-CCcEEEEeCC-CceEEEccCC--cEEEeeecCCcc
Q 023085 4 NGVIYTAT-RDGWIKRLQ-DGTW---VNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--VENFLSYVNGSK 74 (287)
Q Consensus 4 ~G~l~~~~-~~g~i~~~~-~~~~---~~~~~~~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~~~g--~~~~~~~~~~~~ 74 (287)
++.||+++ .++.|.+++ ++.. .........|. ++++|+ .|+||+++.. +.|.+++.+| .+.+.. ..
T Consensus 46 ~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~-glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~----~~ 120 (318)
T 3sov_A 46 HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD-GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW----QE 120 (318)
T ss_dssp GTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----SS
T ss_pred CCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCcc-EEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEe----CC
Confidence 57899887 668899998 4432 22333345678 999996 6789999866 4688888666 444432 22
Q ss_pred ccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccccccceEEEccCCCEEEEEe
Q 023085 75 LRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYVVVCE 152 (287)
Q Consensus 75 ~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~l~v~~ 152 (287)
+..|+++++|+ .|.||+++.+ ....|++++++....+.+ ...+..|+|++++++++.||+++
T Consensus 121 ~~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 121 LDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp CSSEEEEEEEGGGTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCCccEEEEeCCCCEEEEEecC----------------CCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEE
Confidence 46789999997 5889998633 246899999873333333 35678899999999888999999
Q ss_pred CCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 153 SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 153 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
+..++|+++++++. ..+.+.......|.++++|.+ .+|++...
T Consensus 185 ~~~~~I~~~d~dG~---~~~~~~~~~~~~P~glav~~~-~lywtd~~ 227 (318)
T 3sov_A 185 AKLNFIHKSNLDGT---NRQAVVKGSLPHPFALTLFED-ILYWTDWS 227 (318)
T ss_dssp TTTTEEEEEETTSC---SCEEEECSCCSCEEEEEEETT-EEEEEETT
T ss_pred CCCCEEEEEcCCCC---ceEEEecCCCCCceEEEEeCC-EEEEEecC
Confidence 99999999998753 223343333457999999854 67777765
No 42
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.66 E-value=6.9e-15 Score=125.58 Aligned_cols=197 Identities=15% Similarity=0.181 Sum_probs=132.4
Q ss_pred ccccCeEECCCCcEEEEeCCC-------------------------ceEEEc-cCC-cEEEeeecCCccccccceEEEcC
Q 023085 33 QTLVGLTSTKEGHLIICDNAN-------------------------GLHKVS-EDG-VENFLSYVNGSKLRFANDVVEAS 85 (287)
Q Consensus 33 ~~~~~i~~d~dg~l~v~~~~~-------------------------gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~ 85 (287)
.+. +++++++|++|+++... .|++++ .+| +.... ....+..|.++++++
T Consensus 25 ~v~-~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~---~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 25 QVS-GVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSS---GKNLFYLPHGLSIDT 100 (329)
T ss_dssp CEE-EEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEE---CTTTCSSEEEEEECT
T ss_pred Cce-EEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEecc---CCCccCCceEEEECC
Confidence 455 89999999999998664 388888 557 43321 122356899999999
Q ss_pred CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCC--eeEEee---------ccccccceEEEccCCCEEEEEeC-
Q 023085 86 DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN--ITTLVA---------DGFYFANGVALSRDEDYVVVCES- 153 (287)
Q Consensus 86 ~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~---------~~~~~~~~i~~~~~~~~l~v~~~- 153 (287)
+|++|+++.. .+.|.+++++.. .+..+. ..+..|++++++|++..+|+++.
T Consensus 101 ~g~l~v~d~~-----------------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~ 163 (329)
T 3fvz_A 101 DGNYWVTDVA-----------------LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY 163 (329)
T ss_dssp TSCEEEEETT-----------------TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS
T ss_pred CCCEEEEECC-----------------CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC
Confidence 9999998643 467999998744 233332 23457999999994445999996
Q ss_pred CCCEEEEEEecCCCCcceeEEec------cCCCCCcceeeCCC-CCEEEEEeccchhHHHHhhcchhHHHHHHhCCcccc
Q 023085 154 WKFRCRKYWLKGERKGKLETFAE------NLPGAPDNINLAPD-GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFS 226 (287)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~d~~-G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (287)
..++|.+|+.++........... .....|.++++|++ |+||++...
T Consensus 164 ~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~--------------------------- 216 (329)
T 3fvz_A 164 CNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE--------------------------- 216 (329)
T ss_dssp SCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT---------------------------
T ss_pred CCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC---------------------------
Confidence 68899999955421111111000 01124899999998 899999976
Q ss_pred ccccCCCceEEEEECCC-CcEEEEEECCCCccccceEE------EEE-eCCEEEEEecCCCeEEEEeC
Q 023085 227 QFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTS------GLQ-VDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 227 ~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~------~~~-~~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|.+++++ |+.+..+..+... ..+.. +.. .++++|+++.....|.++++
T Consensus 217 -------~~~I~~~~~~~G~~~~~~~~~~~~--~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~ 275 (329)
T 3fvz_A 217 -------NGRIQCFKTDTKEFVREIKHASFG--RNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNF 275 (329)
T ss_dssp -------TTEEEEEETTTCCEEEEECCTTTT--TCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEET
T ss_pred -------CCEEEEEECCCCcEEEEEeccccC--CCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEc
Confidence 3589999988 8888887543211 11221 222 25677777777777777764
No 43
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.65 E-value=4.9e-14 Score=116.62 Aligned_cols=190 Identities=13% Similarity=0.108 Sum_probs=135.3
Q ss_pred CCcEEEEe-cCCeEEEEE-CCce-EEEEee-CCccccCeEECCC-CcEEEEeCC-CceEEEccCC--cEEEeeecCCccc
Q 023085 4 NGVIYTAT-RDGWIKRLQ-DGTW-VNWKFI-DSQTLVGLTSTKE-GHLIICDNA-NGLHKVSEDG--VENFLSYVNGSKL 75 (287)
Q Consensus 4 ~G~l~~~~-~~g~i~~~~-~~~~-~~~~~~-~~~~~~~i~~d~d-g~l~v~~~~-~gi~~~~~~g--~~~~~~~~~~~~~ 75 (287)
++.||+++ .++.|.+++ ++.. ..+... ...|. ++++|++ ++||+++.. +.|.+++.+| .+.+... .+
T Consensus 47 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~-~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~----~~ 121 (267)
T 1npe_A 47 DKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPE-GIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDT----GL 121 (267)
T ss_dssp TTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS----SC
T ss_pred CCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCcc-EEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEEC----CC
Confidence 56899988 567999999 5443 333222 24677 9999985 689999866 4688888666 4444221 23
Q ss_pred cccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee-ccccccceEEEccCCCEEEEEeC
Q 023085 76 RFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCES 153 (287)
Q Consensus 76 ~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~l~v~~~ 153 (287)
..|+++++++ .|.||+++.. ...+.|++++++......+. ..+..|++++++++++.||+++.
T Consensus 122 ~~P~~i~vd~~~g~lyv~~~~---------------~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~ 186 (267)
T 1npe_A 122 VNPRGIVTDPVRGNLYWTDWN---------------RDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDA 186 (267)
T ss_dssp SSEEEEEEETTTTEEEEEECC---------------SSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEET
T ss_pred CCccEEEEeeCCCEEEEEECC---------------CCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEEC
Confidence 5789999998 5889998633 11357888887633333332 44678999999999889999999
Q ss_pred CCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCC
Q 023085 154 WKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGG 233 (287)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
..++|.+++.++. ....+.. ....|.++++| +++||++...
T Consensus 187 ~~~~I~~~~~~g~---~~~~~~~-~~~~P~gi~~d-~~~lyva~~~---------------------------------- 227 (267)
T 1npe_A 187 GTHRAECLNPAQP---GRRKVLE-GLQYPFAVTSY-GKNLYYTDWK---------------------------------- 227 (267)
T ss_dssp TTTEEEEEETTEE---EEEEEEE-CCCSEEEEEEE-TTEEEEEETT----------------------------------
T ss_pred CCCEEEEEecCCC---ceEEEec-CCCCceEEEEe-CCEEEEEECC----------------------------------
Confidence 9999999997642 2222322 23468999998 6889999876
Q ss_pred ceEEEEECCC-CcEEEEEEC
Q 023085 234 GAHLIHVAED-GTIIRNLVD 252 (287)
Q Consensus 234 ~~~v~~~~~~-g~~~~~~~~ 252 (287)
.+.|.+++++ ++.+..+..
T Consensus 228 ~~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 228 TNSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp TTEEEEEETTTTEEEEEECC
T ss_pred CCeEEEEeCCCCCceEEEcc
Confidence 3589999986 677777753
No 44
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.64 E-value=5.2e-14 Score=122.93 Aligned_cols=191 Identities=11% Similarity=0.119 Sum_probs=137.0
Q ss_pred CCCcEEEEe-cCCeEEEEE-CCc-eEEEEe-eCCccccCeEECC-CCcEEEEeCC-CceEEEccCC--cEEEeeecCCcc
Q 023085 3 KNGVIYTAT-RDGWIKRLQ-DGT-WVNWKF-IDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--VENFLSYVNGSK 74 (287)
Q Consensus 3 ~~G~l~~~~-~~g~i~~~~-~~~-~~~~~~-~~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~~~g--~~~~~~~~~~~~ 74 (287)
.++.||+++ .+++|++++ ++. .+.+.. ....|. ++++|+ .++||+++.. +.|.+++.+| .+.+.. ..
T Consensus 126 ~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~----~~ 200 (386)
T 3v65_B 126 RRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW----QS 200 (386)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCC-CEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC----SS
T ss_pred CCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCcc-EEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec----CC
Confidence 467899887 678999999 544 333332 234678 999996 6789999866 4688887666 444432 12
Q ss_pred ccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccccccceEEEccCCCEEEEEe
Q 023085 75 LRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYVVVCE 152 (287)
Q Consensus 75 ~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~l~v~~ 152 (287)
+..|++|++|+ +|.||++|.. ..+.|++++++......+ ...+..|+||+++++++.|||++
T Consensus 201 l~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD 264 (386)
T 3v65_B 201 LEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVD 264 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEE
T ss_pred CCCCcEEEEEcCCCeEEEeccC----------------CCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEE
Confidence 46789999996 5789998644 236899999874333333 34577899999999888999999
Q ss_pred CCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCC
Q 023085 153 SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLG 232 (287)
Q Consensus 153 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
+..++|+++++++. ..+.+.......|.+|+++ +++||++...
T Consensus 265 ~~~~~I~~~d~dG~---~~~~~~~~~~~~P~giav~-~~~ly~td~~--------------------------------- 307 (386)
T 3v65_B 265 AKHHVIERANLDGS---HRKAVISQGLPHPFAITVF-EDSLYWTDWH--------------------------------- 307 (386)
T ss_dssp TTTTEEEEECTTSC---SCEEEECSSCSSEEEEEEE-TTEEEEEETT---------------------------------
T ss_pred CCCCEEEEEeCCCC---eeEEEEECCCCCceEEEEE-CCEEEEeeCC---------------------------------
Confidence 99999999998752 2233332334579999995 5679999876
Q ss_pred CceEEEEEC-CCCcEEEEEEC
Q 023085 233 GGAHLIHVA-EDGTIIRNLVD 252 (287)
Q Consensus 233 ~~~~v~~~~-~~g~~~~~~~~ 252 (287)
.+.|.+++ ++|+....+..
T Consensus 308 -~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 308 -TKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp -TTEEEEEETTTCCSCEEEEC
T ss_pred -CCeEEEEECCCCcceEEEcc
Confidence 35889998 56776666653
No 45
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.64 E-value=8e-14 Score=118.57 Aligned_cols=192 Identities=14% Similarity=0.072 Sum_probs=131.6
Q ss_pred CccccCeEECCCCc-EEEEeCCCceEEEc-cCC-cEEEeeecC--------C-------ccccccceEEEcC-CCcEEEE
Q 023085 32 SQTLVGLTSTKEGH-LIICDNANGLHKVS-EDG-VENFLSYVN--------G-------SKLRFANDVVEAS-DGSLYFT 92 (287)
Q Consensus 32 ~~~~~~i~~d~dg~-l~v~~~~~gi~~~~-~~g-~~~~~~~~~--------~-------~~~~~~~~l~~d~-~g~l~v~ 92 (287)
..|. ++++|++|+ +|++...++|++++ .++ ++.+..... + .....|.++++++ +|+||++
T Consensus 19 ~~p~-~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 19 YAPN-SFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp SCCC-CEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CCce-EEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 4577 999999998 88877667899999 455 655532110 0 1124688999996 8999997
Q ss_pred cCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeec-----cccccceEEEcc-CCCEEEEEeCC------------
Q 023085 93 VSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-----GFYFANGVALSR-DEDYVVVCESW------------ 154 (287)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~~~~i~~~~-~~~~l~v~~~~------------ 154 (287)
+.. .+|+++++++++++.+.. .+..|+++++++ +|+ +|+++..
T Consensus 98 d~~------------------~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 98 DCY------------------YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp ETT------------------TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHH
T ss_pred ECC------------------CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceeh
Confidence 522 358999988666555432 234689999999 886 9999864
Q ss_pred -----CCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHHhCCcccccc
Q 023085 155 -----KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQF 228 (287)
Q Consensus 155 -----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
.++|++++.++.+ ...+... ...|++++++++|+ ||++...
T Consensus 159 ~~~~~~g~v~~~d~~~~~---~~~~~~~-~~~p~gia~~~dg~~lyv~d~~----------------------------- 205 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKE---TTLLLKE-LHVPGGAEVSADSSFVLVAEFL----------------------------- 205 (322)
T ss_dssp HHTCCCEEEEEEETTTTE---EEEEEEE-ESCCCEEEECTTSSEEEEEEGG-----------------------------
T ss_pred cccCCCceEEEEeCCCCE---EEEeccC-CccCcceEECCCCCEEEEEeCC-----------------------------
Confidence 2579999865332 2222211 23689999999986 9999865
Q ss_pred ccCCCceEEEEECCCCc---EEEEEECCCCccccceEEEEEe-CCEEEEEecC----------CCeEEEEeC
Q 023085 229 ITLGGGAHLIHVAEDGT---IIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLT----------SNFIGKVQL 286 (287)
Q Consensus 229 ~~~~~~~~v~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~----------~~~i~~~~~ 286 (287)
.+.|.+++.++. ....+....+ +..++.+ +|+||+++.. +..|.+++-
T Consensus 206 -----~~~I~~~~~~~~~~~~~~~~~~~~g-----P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~ 267 (322)
T 2fp8_A 206 -----SHQIVKYWLEGPKKGTAEVLVKIPN-----PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE 267 (322)
T ss_dssp -----GTEEEEEESSSTTTTCEEEEEECSS-----EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT
T ss_pred -----CCeEEEEECCCCcCCccceEEeCCC-----CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC
Confidence 258899987652 2233332111 6778877 6899999976 567888763
No 46
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.62 E-value=1.8e-13 Score=116.25 Aligned_cols=171 Identities=13% Similarity=0.083 Sum_probs=120.4
Q ss_pred CCcEEEEe-cCCeEEEEE-CC----ce-EEEEe-eCCccccCeEECC-CCcEEEEeCC-CceEEEccCC--cEEEeeecC
Q 023085 4 NGVIYTAT-RDGWIKRLQ-DG----TW-VNWKF-IDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--VENFLSYVN 71 (287)
Q Consensus 4 ~G~l~~~~-~~g~i~~~~-~~----~~-~~~~~-~~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~~~g--~~~~~~~~~ 71 (287)
++.||+++ .+++|++++ ++ .. +.+.. ....|. ++++|+ .++||+++.. +.|.+++.+| .+.+...
T Consensus 41 ~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-- 117 (316)
T 1ijq_A 41 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-- 117 (316)
T ss_dssp TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC--
T ss_pred CCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC-EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEEC--
Confidence 56899988 568999998 54 22 22222 224677 999996 6689999765 5688888666 4444321
Q ss_pred CccccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccccccceEEEccCCCEEE
Q 023085 72 GSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYVV 149 (287)
Q Consensus 72 ~~~~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~l~ 149 (287)
.+..|+++++|+ +|.||+++.. ..+.|++++++....+.+ ...+..|++++++++++.||
T Consensus 118 --~~~~P~~iavdp~~g~ly~~d~~----------------~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY 179 (316)
T 1ijq_A 118 --NGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLY 179 (316)
T ss_dssp --TTCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEE
T ss_pred --CCCCcceEEeCCCCCEEEEEccC----------------CCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEE
Confidence 245789999996 6789998633 136899999873333333 24577899999999988999
Q ss_pred EEeCCCCEEEEEEecCCCCcceeEEecc--CCCCCcceeeCCCCCEEEEEec
Q 023085 150 VCESWKFRCRKYWLKGERKGKLETFAEN--LPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 150 v~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
+++...++|.+++.++.. .+.+... ....|.++++|. ++||++...
T Consensus 180 ~~D~~~~~I~~~d~dg~~---~~~~~~~~~~~~~P~giav~~-~~ly~~d~~ 227 (316)
T 1ijq_A 180 WVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFE-DKVFWTDII 227 (316)
T ss_dssp EEETTTTEEEEEETTSCS---CEEEEECTTTTSSEEEEEEET-TEEEEEETT
T ss_pred EEECCCCeEEEEecCCCc---eEEEeecCCccCCcEEEEEEC-CEEEEEECC
Confidence 999999999999987532 2333321 234699999984 789999876
No 47
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.61 E-value=9.2e-13 Score=112.46 Aligned_cols=226 Identities=14% Similarity=0.123 Sum_probs=151.9
Q ss_pred CCCC-cEEEEec-------CCeEEEEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeCC-CceEEEc-cCC-c-EEE
Q 023085 2 DKNG-VIYTATR-------DGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG-V-ENF 66 (287)
Q Consensus 2 d~~G-~l~~~~~-------~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~-~gi~~~~-~~g-~-~~~ 66 (287)
+++| .||+++. ++.|..++ +++..........+. +++++++|+ +|++... ..|..++ .++ . ..+
T Consensus 49 s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~ 127 (353)
T 3vgz_A 49 SQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPF-GATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRL 127 (353)
T ss_dssp ETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCC-SEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcc-eEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEE
Confidence 4566 6888773 45799999 566555545555677 999999996 8888765 4688898 666 3 333
Q ss_pred eeecCC----ccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeec-cccccceEE
Q 023085 67 LSYVNG----SKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-GFYFANGVA 140 (287)
Q Consensus 67 ~~~~~~----~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~i~ 140 (287)
...... .....|.+++++++|. +|+++.. ..+.|+.+|+.+++...... ....+.+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (353)
T 3vgz_A 128 VLDDRKRTEEVRPLQPRELVADDATNTVYISGIG----------------KESVIWVVDGGNIKLKTAIQNTGKMSTGLA 191 (353)
T ss_dssp ESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES----------------SSCEEEEEETTTTEEEEEECCCCTTCCCCE
T ss_pred ecCCCccccccCCCCCceEEECCCCCEEEEEecC----------------CCceEEEEcCCCCceEEEecCCCCccceEE
Confidence 221110 0112478899999886 7775311 24679999998887665444 445688999
Q ss_pred EccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEec-c--CCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHH
Q 023085 141 LSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE-N--LPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKH 216 (287)
Q Consensus 141 ~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~ 216 (287)
++|+++.+|+++. .+.|..+|....+.. ..+.. . ....+.+++++++|+ +|++...
T Consensus 192 ~s~dg~~l~~~~~-~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------------- 251 (353)
T 3vgz_A 192 LDSEGKRLYTTNA-DGELITIDTADNKIL--SRKKLLDDGKEHFFINISLDTARQRAFITDSK----------------- 251 (353)
T ss_dssp EETTTTEEEEECT-TSEEEEEETTTTEEE--EEEECCCSSSCCCEEEEEEETTTTEEEEEESS-----------------
T ss_pred ECCCCCEEEEEcC-CCeEEEEECCCCeEE--EEEEcCCCCCCcccceEEECCCCCEEEEEeCC-----------------
Confidence 9999999999875 678999997543211 11111 0 123456789999986 7877754
Q ss_pred HHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCCccccceEEEEE--eCCEEEEEecCCCeEEEEeCC
Q 023085 217 VLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQ--VDNHLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~--~~g~l~i~~~~~~~i~~~~~~ 287 (287)
.+.|..+|.+ ++.+..+..+.. ..+.. +++.||+++...+.|.++|+.
T Consensus 252 -----------------~~~v~~~d~~~~~~~~~~~~~~~------~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 302 (353)
T 3vgz_A 252 -----------------AAEVLVVDTRNGNILAKVAAPES------LAVLFNPARNEAYVTHRQAGKVSVIDAK 302 (353)
T ss_dssp -----------------SSEEEEEETTTCCEEEEEECSSC------CCEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred -----------------CCEEEEEECCCCcEEEEEEcCCC------ceEEECCCCCEEEEEECCCCeEEEEECC
Confidence 3588889875 667777665321 23444 346799999888999999863
No 48
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.60 E-value=3.3e-13 Score=116.35 Aligned_cols=240 Identities=15% Similarity=0.193 Sum_probs=149.2
Q ss_pred CCCCcEEEEecCCeEEEEE-CCceEEEEee------CCccccCeEECCC----CcEEEEeCC--------CceEEEc-cC
Q 023085 2 DKNGVIYTATRDGWIKRLQ-DGTWVNWKFI------DSQTLVGLTSTKE----GHLIICDNA--------NGLHKVS-ED 61 (287)
Q Consensus 2 d~~G~l~~~~~~g~i~~~~-~~~~~~~~~~------~~~~~~~i~~d~d----g~l~v~~~~--------~gi~~~~-~~ 61 (287)
+++|+||++...|+|.+++ +++ +.+... ...+. +|+++++ |+||++... ..|.+++ ..
T Consensus 37 ~pdG~l~V~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~-gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~ 114 (354)
T 3a9g_A 37 LGGGRYLVTERPGRLVLISPSGK-KLVASFDVANVGEAGLL-GLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDG 114 (354)
T ss_dssp EETTEEEEEETTTEEEEECSSCE-EEEEECCCCCSTTCSEE-EEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECS
T ss_pred cCCCeEEEEeCCCEEEEEeCCCc-eEeeccceeecCCCcee-eEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECC
Confidence 5789999999889999998 666 444321 23467 8999997 799999753 4688888 32
Q ss_pred C---c---EEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe---------e
Q 023085 62 G---V---ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI---------T 126 (287)
Q Consensus 62 g---~---~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---------~ 126 (287)
+ + +.+.........+.++.|+++++|.||++....-. .... . ......+.|+|++++ ++ .
T Consensus 115 ~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~--~~~~-~-d~~~~~G~I~ri~~d-G~~p~~npf~~~ 189 (354)
T 3a9g_A 115 STFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAAD--PRLA-Q-DLSSLAGKILRVDEE-GRPPADNPFPNS 189 (354)
T ss_dssp SSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTC--GGGG-T-CTTCCSSEEEEECTT-SCCCTTSSSTTC
T ss_pred CCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCC--Cccc-c-CCCCCCeEEEEEcCC-CCCCCCCCCCCC
Confidence 2 2 12222111223456889999999999998533100 0000 0 011234689999987 43 3
Q ss_pred EEeeccccccceEEEccCCCEEEEEeCCCCE---EEEEEecCCCCc-----------ce-eEEec--cCCCCCcceee--
Q 023085 127 TLVADGFYFANGVALSRDEDYVVVCESWKFR---CRKYWLKGERKG-----------KL-ETFAE--NLPGAPDNINL-- 187 (287)
Q Consensus 127 ~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~---l~~~~~~~~~~~-----------~~-~~~~~--~~~~~~~~i~~-- 187 (287)
+.+...+..|.+++++++...||+++...+. |.++.. +...+ .. ..... .....|.++++
T Consensus 190 ~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~-G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~ 268 (354)
T 3a9g_A 190 PIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK-GGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVH 268 (354)
T ss_dssp CEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT-TCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECC
T ss_pred cEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC-CCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEEC
Confidence 4455667889999999954459999986654 444432 11100 00 01110 11235888888
Q ss_pred -----CCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC--CcEE--EEEECCCCccc
Q 023085 188 -----APDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED--GTII--RNLVDPTGQLM 258 (287)
Q Consensus 188 -----d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--g~~~--~~~~~~~~~~~ 258 (287)
+.+|++|++... .+.|.+++.+ ++.. ..+-. +. .
T Consensus 269 g~~fp~~~G~l~v~~~~----------------------------------~~~v~~~~~~~~g~~~~~~~~~~--~~-~ 311 (354)
T 3a9g_A 269 GDMFPGLRGWLLIACLR----------------------------------GSMLAAVNFGDNMEVRKISTFFK--NV-F 311 (354)
T ss_dssp SSSCGGGTTEEEEEETT----------------------------------TTEEEEEEECGGGCEEEEEEECT--TT-S
T ss_pred CCCCcccCCcEEEEEcC----------------------------------CCEEEEEEECCCCcccceeeecc--CC-C
Confidence 468899999876 3578888765 3332 22221 11 3
Q ss_pred cceEEEEEe-CCEEEEEecC-CC---------eEEEEeC
Q 023085 259 SFVTSGLQV-DNHLYVISLT-SN---------FIGKVQL 286 (287)
Q Consensus 259 ~~~~~~~~~-~g~l~i~~~~-~~---------~i~~~~~ 286 (287)
..+..+.++ +|.|||++.. .+ +|.++..
T Consensus 312 ~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~~ 350 (354)
T 3a9g_A 312 GRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIVS 350 (354)
T ss_dssp CCEEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEEE
T ss_pred CCeeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEec
Confidence 457888886 7999999974 32 8888753
No 49
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.60 E-value=1.8e-14 Score=134.83 Aligned_cols=221 Identities=9% Similarity=0.105 Sum_probs=151.3
Q ss_pred CcEEEEecCCeEEEEE-C-CceEEEEeeCCccccCeEECC-CCcEEEEeCC-CceEEEccCC------cEEEeeecCCcc
Q 023085 5 GVIYTATRDGWIKRLQ-D-GTWVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG------VENFLSYVNGSK 74 (287)
Q Consensus 5 G~l~~~~~~g~i~~~~-~-~~~~~~~~~~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~~~g------~~~~~~~~~~~~ 74 (287)
..|+++. ...|.+++ + .....+......|. ++++++ .++||+++.. +.|++++.++ ...+. ...
T Consensus 378 ~~ll~~~-~~~I~~id~~~~~~~~~~~~~~~p~-gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i----~~~ 451 (699)
T 1n7d_A 378 AYLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI----SRD 451 (699)
T ss_dssp CCBCCCC-TTC-CEECTTSCCEECCSCCCTTCC-CCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC----CSC
T ss_pred eeEEecC-ccceEEEeCCCCcceeeeccCcceE-EEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE----eCC
Confidence 4556654 35688887 3 33443434445677 999997 5689999765 5688888332 11111 112
Q ss_pred ccccceEEEc-CCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee-ccccccceEEEccCCCEEEEEe
Q 023085 75 LRFANDVVEA-SDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCE 152 (287)
Q Consensus 75 ~~~~~~l~~d-~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~l~v~~ 152 (287)
+..|.+|+++ ..++||+++.. .+.|.+++++....+.+. ..+..|++++++|+++.|||++
T Consensus 452 ~~~P~glavD~~~g~LY~tD~~-----------------~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td 514 (699)
T 1n7d_A 452 IQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTD 514 (699)
T ss_dssp C--CCCEECCCSSSBCEECCTT-----------------TSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECC
T ss_pred CCCcceEEEEeeCCcEEEEecc-----------------CCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcc
Confidence 3568899999 46789997533 457899988754444443 3467899999999887899999
Q ss_pred CCC-CEEEEEEecCCCCcceeEEeccCCCCCcceeeCCC-CCEEEEEeccchhHHHHhhcchhHHHHHHhCCcccccccc
Q 023085 153 SWK-FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPD-GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFIT 230 (287)
Q Consensus 153 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~-G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
... ++|+++++++.. ...+.......|++|++|++ ++||++...
T Consensus 515 ~~~~~~I~~~~~dG~~---~~~l~~~~l~~PnGlavd~~~~~LY~aD~~------------------------------- 560 (699)
T 1n7d_A 515 WGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSK------------------------------- 560 (699)
T ss_dssp CSSSCCEEBCCSSSCC---CCEESCSSCSSCCCEEECTTTCCEEEEETT-------------------------------
T ss_pred cCCCCeEEEEeCCCCC---eeEEEeCCCCCccEEEEeccCCEEEEEecC-------------------------------
Confidence 765 789998876532 22232222347999999974 789999976
Q ss_pred CCCceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEeC
Q 023085 231 LGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 231 ~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 286 (287)
...|.+++.+|...+.+.... ..+..+.++.+++++||++...+++|.+++.
T Consensus 561 ---~~~I~~~d~dG~~~~~~~~~~-~~~~~P~glavd~~~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 561 ---LHSISSIDVNGGNRKTILEDE-KRLAHPFSLAVFEDKVFWTDIINEAIFSANR 612 (699)
T ss_dssp ---TTEEEEECSSSSCCEEECCCS-SSCSSCCCCEEETTEEEEECSTTTCEEEEET
T ss_pred ---CCeEEEEccCCCceEEEEecC-CcCCCceEeEEECCEEEEEeCCCCeEEEEEc
Confidence 358999999887666654322 2245677888888899999999999999874
No 50
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.59 E-value=1.7e-12 Score=111.02 Aligned_cols=229 Identities=12% Similarity=0.105 Sum_probs=142.1
Q ss_pred CCCCcEEEEec---CCeEEEEE--CCceEEEEe---eCCccccCeEECCCCc-EEEEeCC-CceEEEc--cCC-cEEEee
Q 023085 2 DKNGVIYTATR---DGWIKRLQ--DGTWVNWKF---IDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS--EDG-VENFLS 68 (287)
Q Consensus 2 d~~G~l~~~~~---~g~i~~~~--~~~~~~~~~---~~~~~~~~i~~d~dg~-l~v~~~~-~gi~~~~--~~g-~~~~~~ 68 (287)
+++|.||+++. ++.|..|+ +++.+.... ....|. ++++++||+ ||++... ..+..++ .+| .+.+..
T Consensus 48 spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~-~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~ 126 (347)
T 3hfq_A 48 SAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPA-YVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDT 126 (347)
T ss_dssp CTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCS-EEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEE
T ss_pred ccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCE-EEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecce
Confidence 57888888875 47888888 555544433 355677 899999997 7777744 3466666 455 444432
Q ss_pred ec-CCc------cccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCC-CCeeEEee----cccccc
Q 023085 69 YV-NGS------KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SNITTLVA----DGFYFA 136 (287)
Q Consensus 69 ~~-~~~------~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~----~~~~~~ 136 (287)
.. .+. ....+..++++++|++|+++.. .+.|+.++.. ++++.... .....|
T Consensus 127 ~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~-----------------~~~v~~~~~~~~g~~~~~~~~~~~~g~~p 189 (347)
T 3hfq_A 127 VQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG-----------------SDKVYVYNVSDAGQLSEQSVLTMEAGFGP 189 (347)
T ss_dssp EECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT-----------------TTEEEEEEECTTSCEEEEEEEECCTTCCE
T ss_pred eecCCCCCCccccCCCceEEEECCCCcEEEEeCC-----------------CCEEEEEEECCCCcEEEeeeEEcCCCCCC
Confidence 21 111 1234778999999998886533 3456666654 45544321 223467
Q ss_pred ceEEEccCCCEEEEEeCCCCEEEEEEecC--CCCcceeEEeccCC-----CCCcceeeCCCCC-EEEEEeccchhHHHHh
Q 023085 137 NGVALSRDEDYVVVCESWKFRCRKYWLKG--ERKGKLETFAENLP-----GAPDNINLAPDGT-FWIAIIKLDARRMKIL 208 (287)
Q Consensus 137 ~~i~~~~~~~~l~v~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~-----~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~ 208 (287)
..++++|||+.+|+++...+.+..|+++. .+............ ..|.+++++++|+ ||++...
T Consensus 190 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~--------- 260 (347)
T 3hfq_A 190 RHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG--------- 260 (347)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET---------
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC---------
Confidence 78999999999999988888998888764 22111112211111 2366799999997 7777764
Q ss_pred hcchhHHHHHHhCCccccccccCCCceEEEEE--CCCCcE--EEEEECCCCccccceEEEEEe--CCEEEEEecCCCeEE
Q 023085 209 NSSKLIKHVLAAYPKLFSQFITLGGGAHLIHV--AEDGTI--IRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIG 282 (287)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~g~~--~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~~~~i~ 282 (287)
.+.|..+ +++|.. +..+... + ..+..+.++ +..||+++..++.|.
T Consensus 261 -------------------------~~~v~v~~~~~~g~~~~~~~~~~~-~---~~~~~~~~spdg~~l~v~~~~~~~v~ 311 (347)
T 3hfq_A 261 -------------------------YNTLAVFAVTADGHLTLIQQISTE-G---DFPRDFDLDPTEAFVVVVNQNTDNAT 311 (347)
T ss_dssp -------------------------TTEEEEEEECGGGCEEEEEEEECS-S---SCCCEEEECTTSSEEEEEETTTTEEE
T ss_pred -------------------------CCEEEEEEECCCCcEEEeEEEecC-C---CCcCeEEECCCCCEEEEEEcCCCcEE
Confidence 1244444 444432 3333321 2 235566664 456999999888898
Q ss_pred EEeC
Q 023085 283 KVQL 286 (287)
Q Consensus 283 ~~~~ 286 (287)
++++
T Consensus 312 v~~~ 315 (347)
T 3hfq_A 312 LYAR 315 (347)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8855
No 51
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.59 E-value=5.7e-13 Score=111.64 Aligned_cols=168 Identities=13% Similarity=0.182 Sum_probs=116.5
Q ss_pred CCCCCcEEEEec-CCeEEEEE--CCceEEEEee-----CCccccCeEECCCCcEEEEeC------------------CCc
Q 023085 1 MDKNGVIYTATR-DGWIKRLQ--DGTWVNWKFI-----DSQTLVGLTSTKEGHLIICDN------------------ANG 54 (287)
Q Consensus 1 ~d~~G~l~~~~~-~g~i~~~~--~~~~~~~~~~-----~~~~~~~i~~d~dg~l~v~~~------------------~~g 54 (287)
++++|.||+++. +++|.+++ +++++.+... ...+. +++++++|++|+++. ..+
T Consensus 76 ~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~ 154 (296)
T 3e5z_A 76 LNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPN-DVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRW 154 (296)
T ss_dssp ECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCC-CEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCE
T ss_pred ECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCC-CEEECCCCCEEEECCccccccccccccccccCCCcE
Confidence 368899999985 48999999 6777655432 23456 899999999999743 237
Q ss_pred eEEEccCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCC-CCee---E-E
Q 023085 55 LHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SNIT---T-L 128 (287)
Q Consensus 55 i~~~~~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~---~-~ 128 (287)
|++++.++ .+.+.. ....|++++++++|.+++++. ..+.|++++.. ++++ . .
T Consensus 155 l~~~~~~g~~~~~~~-----~~~~~~gi~~s~dg~~lv~~~-----------------~~~~i~~~~~~~~g~~~~~~~~ 212 (296)
T 3e5z_A 155 VFRLAPDGTLSAPIR-----DRVKPNGLAFLPSGNLLVSDT-----------------GDNATHRYCLNARGETEYQGVH 212 (296)
T ss_dssp EEEECTTSCEEEEEC-----CCSSEEEEEECTTSCEEEEET-----------------TTTEEEEEEECSSSCEEEEEEE
T ss_pred EEEECCCCCEEEeec-----CCCCCccEEECCCCCEEEEeC-----------------CCCeEEEEEECCCCcCcCCCeE
Confidence 99998557 655432 134678999999998777643 24678888764 4554 1 2
Q ss_pred eeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeC-CCC-CEEEEEec
Q 023085 129 VADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLA-PDG-TFWIAIIK 199 (287)
Q Consensus 129 ~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d-~~G-~lwv~~~~ 199 (287)
+......|.+++++++|+ +|++. .++|.+|+.++. ....+. ...+ |.+++++ +++ .||+++..
T Consensus 213 ~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~g~---~~~~~~-~~~~-~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 213 FTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPDGD---ELGRVL-TPQT-TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp ECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTTSC---EEEEEE-CSSC-CCEEEEESTTSCEEEEEETT
T ss_pred eeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCCCC---EEEEEE-CCCC-ceeEEEECCCCCEEEEEcCC
Confidence 212334678999999997 89988 678999997532 122222 2223 8889884 665 59999876
No 52
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.59 E-value=2.9e-12 Score=108.63 Aligned_cols=229 Identities=9% Similarity=0.064 Sum_probs=145.1
Q ss_pred CCCCCc-EEEEec-CCeEEEEE--CCce-EEEEeeCCccccC-eEECCCCcEEEEeCCC----ceEEEc-cCC-cEEEee
Q 023085 1 MDKNGV-IYTATR-DGWIKRLQ--DGTW-VNWKFIDSQTLVG-LTSTKEGHLIICDNAN----GLHKVS-EDG-VENFLS 68 (287)
Q Consensus 1 ~d~~G~-l~~~~~-~g~i~~~~--~~~~-~~~~~~~~~~~~~-i~~d~dg~l~v~~~~~----gi~~~~-~~g-~~~~~~ 68 (287)
++++|. ||+++. ++.|+.++ +++. .........|. . ++++++|+.+++.... .|..++ .++ ......
T Consensus 47 ~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~ 125 (331)
T 3u4y_A 47 ITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSM-ADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP 125 (331)
T ss_dssp ECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCC-CCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE
T ss_pred EcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCc-cceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE
Confidence 357785 888875 78999999 5655 44444555666 6 9999999754454343 588888 566 333222
Q ss_pred ecCCccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCC-ceEEEEeCCCCeeE----EeeccccccceEEEc
Q 023085 69 YVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPH-GQLLKYDPSSNITT----LVADGFYFANGVALS 142 (287)
Q Consensus 69 ~~~~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~----~~~~~~~~~~~i~~~ 142 (287)
. ...|.+++++++|+ +|+++.. ... -.+|.++.. +.+. ........|.+++++
T Consensus 126 ~-----~~~~~~~~~spdg~~l~~~~~~---------------~~~~i~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~s 184 (331)
T 3u4y_A 126 I-----PYDAVGIAISPNGNGLILIDRS---------------SANTVRRFKIDAD-GVLFDTGQEFISGGTRPFNITFT 184 (331)
T ss_dssp C-----CTTEEEEEECTTSSCEEEEEET---------------TTTEEEEEEECTT-CCEEEEEEEEECSSSSEEEEEEC
T ss_pred C-----CCCccceEECCCCCEEEEEecC---------------CCceEEEEEECCC-CcEeecCCccccCCCCccceEEC
Confidence 1 13568999999996 8886422 111 234555433 3321 112334567899999
Q ss_pred cCCCEEEEEeCCCCEEEEEEecCCCCcc-eeEEeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHHh
Q 023085 143 RDEDYVVVCESWKFRCRKYWLKGERKGK-LETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAA 220 (287)
Q Consensus 143 ~~~~~l~v~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (287)
|+++.+|++....+.|..|+++..+... ...+ .....|.+++++++|+ ||++...
T Consensus 185 pdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~--~~~~~~~~~~~spdg~~l~v~~~~--------------------- 241 (331)
T 3u4y_A 185 PDGNFAFVANLIGNSIGILETQNPENITLLNAV--GTNNLPGTIVVSRDGSTVYVLTES--------------------- 241 (331)
T ss_dssp TTSSEEEEEETTTTEEEEEECSSTTSCEEEEEE--ECSSCCCCEEECTTSSEEEEECSS---------------------
T ss_pred CCCCEEEEEeCCCCeEEEEECCCCcccceeeec--cCCCCCceEEECCCCCEEEEEEcC---------------------
Confidence 9999999999888999999986543211 2222 1334688999999998 7777654
Q ss_pred CCccccccccCCCceEEEEECCCCcEE---EEEECC---CCccccceEEEEE--eCCEEEEEecCCCeEEEEeCC
Q 023085 221 YPKLFSQFITLGGGAHLIHVAEDGTII---RNLVDP---TGQLMSFVTSGLQ--VDNHLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 221 ~~~~~~~~~~~~~~~~v~~~~~~g~~~---~~~~~~---~~~~~~~~~~~~~--~~g~l~i~~~~~~~i~~~~~~ 287 (287)
.+.|..++.+...+ ..+... ..........+.. ++..||+++..++.|.+++++
T Consensus 242 -------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 242 -------------TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTIS 303 (331)
T ss_dssp -------------EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred -------------CCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEec
Confidence 35788888764433 222211 0111111122344 457899999999999999874
No 53
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.59 E-value=3.1e-13 Score=118.88 Aligned_cols=175 Identities=16% Similarity=0.237 Sum_probs=118.2
Q ss_pred CCCC-cEEEEecCC--eEEEEE-CCceE--EEE---e-eCCccccCeEECC-CCcEEEEeCCCceEEEc-cCC-cEEEee
Q 023085 2 DKNG-VIYTATRDG--WIKRLQ-DGTWV--NWK---F-IDSQTLVGLTSTK-EGHLIICDNANGLHKVS-EDG-VENFLS 68 (287)
Q Consensus 2 d~~G-~l~~~~~~g--~i~~~~-~~~~~--~~~---~-~~~~~~~~i~~d~-dg~l~v~~~~~gi~~~~-~~g-~~~~~~ 68 (287)
+++| .||+++..+ .|++++ .+.+. ... . ....|. ++++++ +|+||+++..+.|++++ .++ ...+..
T Consensus 179 ~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~-~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~ 257 (409)
T 3hrp_A 179 TKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIG-AVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQ 257 (409)
T ss_dssp CTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCC-BCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEE
T ss_pred ecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcE-EEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEec
Confidence 4566 578877544 899999 33222 221 1 334677 999999 78999987655699999 445 444421
Q ss_pred e-cCCccccccc-eEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeec-c------------
Q 023085 69 Y-VNGSKLRFAN-DVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-G------------ 132 (287)
Q Consensus 69 ~-~~~~~~~~~~-~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~------------ 132 (287)
. ..+.....|. ++++++ ++.||+++.. .+.|++++++ +.+..+.. .
T Consensus 258 ~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~-----------------~~~I~~~~~~-g~~~~~~g~~~~~g~~dg~~~~ 319 (409)
T 3hrp_A 258 LELSGSLGTNPGPYLIYYFVDSNFYMSDQN-----------------LSSVYKITPD-GECEWFCGSATQKTVQDGLREE 319 (409)
T ss_dssp CCCCSCCCCSSCCEEEEETTTTEEEEEETT-----------------TTEEEEECTT-CCEEEEEECTTCCSCBCEEGGG
T ss_pred ccccCCCCCCccccEEEeCCCCEEEEEeCC-----------------CCEEEEEecC-CCEEEEEeCCCCCCcCCCcccc
Confidence 1 1111112345 999999 5899998643 5689999877 44444322 1
Q ss_pred --ccccceEEEccCCCEEEEEeC-CCCEEEEEEecCCCCcceeEEecc--------------CCCCCcceeeCCCCCEEE
Q 023085 133 --FYFANGVALSRDEDYVVVCES-WKFRCRKYWLKGERKGKLETFAEN--------------LPGAPDNINLAPDGTFWI 195 (287)
Q Consensus 133 --~~~~~~i~~~~~~~~l~v~~~-~~~~l~~~~~~~~~~~~~~~~~~~--------------~~~~~~~i~~d~~G~lwv 195 (287)
+..|++++++++|+ ||+++. .+++|.++++.++. ...+... ....|.++++|++|+||+
T Consensus 320 ~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G~---v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyV 395 (409)
T 3hrp_A 320 ALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDGY---VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWI 395 (409)
T ss_dssp CBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTTE---EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEE
T ss_pred cEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCCE---EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEE
Confidence 45699999999998 999999 89999999954322 2222111 123699999999999999
Q ss_pred EEec
Q 023085 196 AIIK 199 (287)
Q Consensus 196 ~~~~ 199 (287)
+...
T Consensus 396 ad~~ 399 (409)
T 3hrp_A 396 AEAW 399 (409)
T ss_dssp EEST
T ss_pred EECC
Confidence 9987
No 54
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.59 E-value=1.1e-12 Score=121.16 Aligned_cols=218 Identities=11% Similarity=0.120 Sum_probs=156.4
Q ss_pred CCcEEEEecCCeEEEEE-CC-ceEEEEee--CCccccCeEECC-CCcEEEEeCC-CceEEEccCC--cEEEeeecCCccc
Q 023085 4 NGVIYTATRDGWIKRLQ-DG-TWVNWKFI--DSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--VENFLSYVNGSKL 75 (287)
Q Consensus 4 ~G~l~~~~~~g~i~~~~-~~-~~~~~~~~--~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~~~g--~~~~~~~~~~~~~ 75 (287)
+..|.++ ....|.+++ ++ ........ ...|. ++++|+ +++||+++.. +.|++++.+| .+.+... .+
T Consensus 6 ~~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~-~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~----g~ 79 (628)
T 4a0p_A 6 EAFLLFS-RRADIRRISLETNNNNVAIPLTGVKEAS-ALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEF----GL 79 (628)
T ss_dssp CCEEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS----SC
T ss_pred CcEEEEE-eCCcEEEEECCCCCcceEEEcCCCCceE-EEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeC----CC
Confidence 3456676 567899998 43 22222221 23567 899996 5689999866 4588888555 5554322 23
Q ss_pred cccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccccccceEEEccCCCEEEEEeC
Q 023085 76 RFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYVVVCES 153 (287)
Q Consensus 76 ~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~l~v~~~ 153 (287)
..|.+|++|. .++||++|.. .+.|.+++++....+.+ ...+..|.+|+++|....|||++.
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~-----------------~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~ 142 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTG-----------------TNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEW 142 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEEC
T ss_pred CCcceEEEEeCCCEEEEEECC-----------------CCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCC
Confidence 5789999996 5789998644 46899998874433333 356788999999997778999996
Q ss_pred C-CCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCC-CCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccC
Q 023085 154 W-KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPD-GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 231 (287)
Q Consensus 154 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~-G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
. ..+|+++++++.. ...+.. ....|.+|++|.+ ++||++...
T Consensus 143 g~~~~I~r~~~dG~~---~~~l~~-~~~~P~GlalD~~~~~LY~aD~~-------------------------------- 186 (628)
T 4a0p_A 143 GGKPKIDRAAMDGSE---RTTLVP-NVGRANGLTIDYAKRRLYWTDLD-------------------------------- 186 (628)
T ss_dssp SSSCEEEEEETTSCS---CEEEEC-SCSSEEEEEEETTTTEEEEEETT--------------------------------
T ss_pred CCCCEEEEEeCCCCc---eEEEEC-CCCCcceEEEccccCEEEEEECC--------------------------------
Confidence 5 6799999987642 223332 2347999999984 789999976
Q ss_pred CCceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEeC
Q 023085 232 GGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 232 ~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|.+++.+|...+.+.. . ...+.+++.++++||+++..+++|.+++.
T Consensus 187 --~~~I~~~d~dG~~~~v~~~--~--l~~P~glav~~~~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 187 --TNLIESSNMLGLNREVIAD--D--LPHPFGLTQYQDYIYWTDWSRRSIERANK 235 (628)
T ss_dssp --TTEEEEEETTSCSCEEEEE--C--CSCEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred --CCEEEEEcCCCCceEEeec--c--CCCceEEEEECCEEEEecCCCCEEEEEEC
Confidence 3589999988865555442 1 35678888888999999999999999873
No 55
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.59 E-value=2.7e-13 Score=116.86 Aligned_cols=239 Identities=16% Similarity=0.193 Sum_probs=146.6
Q ss_pred CCCCCcEEEEecCCeEEEEECCceEEEEee------CCccccCeEECCC----CcEEEEeCC------CceEEEc-cCC-
Q 023085 1 MDKNGVIYTATRDGWIKRLQDGTWVNWKFI------DSQTLVGLTSTKE----GHLIICDNA------NGLHKVS-EDG- 62 (287)
Q Consensus 1 ~d~~G~l~~~~~~g~i~~~~~~~~~~~~~~------~~~~~~~i~~d~d----g~l~v~~~~------~gi~~~~-~~g- 62 (287)
++++|+||++...|+|.++++++.+.+... ...|. +|+++++ +.||++... ..|.+++ ..+
T Consensus 38 ~~pdG~l~V~e~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~-gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~ 116 (352)
T 2ism_A 38 FLPDGGMLIAERPGRIRLFREGRLSTYAELSVYHRGESGLL-GLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGER 116 (352)
T ss_dssp ECTTSCEEEEETTTEEEEEETTEEEEEEECCCCCSTTCSEE-EEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSC
T ss_pred EcCCCeEEEEeCCCeEEEEECCCccEeecceEeecCCCCce-eEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCC
Confidence 368999999998899999986655444322 24567 9999998 789999753 4688888 433
Q ss_pred cE---EEeeecC--CccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCC-------------C
Q 023085 63 VE---NFLSYVN--GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-------------N 124 (287)
Q Consensus 63 ~~---~~~~~~~--~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~ 124 (287)
+. .+..... ....+.+.+|+++++|.||+++...-. .... . ......+.|+|++++. .
T Consensus 117 ~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~--~~~~-~-d~~~~~g~I~ri~~dG~~p~~npf~~~~~~ 192 (352)
T 2ism_A 117 GVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYE--RELA-Q-DLASLGGKILRLTPEGEPAPGNPFLGRRGA 192 (352)
T ss_dssp EEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTC--GGGG-G-CTTCSSSEEEEECTTSSBCTTCTTTTCTTS
T ss_pred cCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCC--Cccc-c-CCCCCceEEEEEcCCCCCCCCCcccCCCCC
Confidence 32 2222122 123457789999999999998643100 0000 0 0112347899999873 1
Q ss_pred eeEEeeccccccceEEEccCCCEEEEEeCCCCE--------EEEEEecCCCCcc------------eeEEec-cCCCCCc
Q 023085 125 ITTLVADGFYFANGVALSRDEDYVVVCESWKFR--------CRKYWLKGERKGK------------LETFAE-NLPGAPD 183 (287)
Q Consensus 125 ~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~--------l~~~~~~~~~~~~------------~~~~~~-~~~~~~~ 183 (287)
..+.+...+..|.+++++|+...||+++...+. |.++.. +...+- ...... .....|.
T Consensus 193 ~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~-G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~ 271 (352)
T 2ism_A 193 RPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVP-GGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPG 271 (352)
T ss_dssp CTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECT-TCBCCTTTCCSCCCCTTSCCCSEECTTCCCEE
T ss_pred CccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEecc-CCcCCCCcccCCCCCCCCcCCeEecCCCCCCc
Confidence 233445556789999999954459999987665 444432 111100 001110 1123578
Q ss_pred ceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC--CcE-----EEEEECCCCc
Q 023085 184 NINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED--GTI-----IRNLVDPTGQ 256 (287)
Q Consensus 184 ~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--g~~-----~~~~~~~~~~ 256 (287)
++++ .+|++|++... .+.|.+++.+ +.. ...+-. .
T Consensus 272 G~~~-~~G~l~v~~~~----------------------------------~~~v~~v~~~~~~~~~~~~~~~~~~~--~- 313 (352)
T 2ism_A 272 NLAF-FRGDLYVAGLR----------------------------------GQALLRLVLEGERGRWRVLRVETALS--G- 313 (352)
T ss_dssp EEEE-ETTEEEEEETT----------------------------------TTEEEEEEEEEETTEEEEEEEEEEEE--S-
T ss_pred ceEE-ECCEEEEEECC----------------------------------CCEEEEEEECCCCcceeecchheecc--c-
Confidence 8998 57899999876 3477777654 221 122221 1
Q ss_pred cccceEEEEEe-CCEEEEEecCCC----------eEEEE
Q 023085 257 LMSFVTSGLQV-DNHLYVISLTSN----------FIGKV 284 (287)
Q Consensus 257 ~~~~~~~~~~~-~g~l~i~~~~~~----------~i~~~ 284 (287)
...+..+.++ +|.|||++...+ +|.++
T Consensus 314 -~~rp~~v~~~pdG~lyv~~~~~~g~g~~~~~~~~i~ri 351 (352)
T 2ism_A 314 -FGRLREVQVGPDGALYVTTSNRDGRGQVRPGDDRVLRL 351 (352)
T ss_dssp -SCCEEEEEECTTSCEEEEECSTTTTSCCCTTCSCEEEE
T ss_pred -CCCeeEEEECCCCcEEEEEeCCCCCCCCCCCCCEEEEe
Confidence 2357888886 799999997632 78775
No 56
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.59 E-value=1.5e-13 Score=116.49 Aligned_cols=172 Identities=14% Similarity=0.172 Sum_probs=104.7
Q ss_pred CCcEEEEeCCCceEEEccCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeC
Q 023085 43 EGHLIICDNANGLHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP 121 (287)
Q Consensus 43 dg~l~v~~~~~gi~~~~~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 121 (287)
+|+||+++...++++++..| ..-.... . ...+..++.+++|.+|++ +..++|+++++
T Consensus 107 ~~~l~v~t~~~~l~~~d~~g~~~~~~~~-~---~~~~~~~~~~~~g~l~vg------------------t~~~~l~~~d~ 164 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTDGTEKWRFKT-K---KAIYATPIVSEDGTIYVG------------------SNDNYLYAINP 164 (330)
T ss_dssp TTEEEEECTTSEEEEECTTSCEEEEEEC-S---SCCCSCCEECTTSCEEEE------------------CTTSEEEEECT
T ss_pred CCEEEEEecCCEEEEEcCCCCEEEEEcC-C---CceeeeeEEcCCCEEEEE------------------cCCCEEEEECC
Confidence 55666665445566666334 2111111 0 112344556666677774 33468999998
Q ss_pred CCCeeEE-eeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEecc
Q 023085 122 SSNITTL-VADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKL 200 (287)
Q Consensus 122 ~~~~~~~-~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~ 200 (287)
+ ++... +.........+++++++. +|++. +.|++++.++. ....+. ........+++|++|+||+++..
T Consensus 165 ~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t---~~l~~~d~~g~---~~~~~~-~~~~~~~~~~~~~~g~l~v~t~~- 234 (330)
T 3hxj_A 165 D-GTEKWRFKTNDAITSAASIGKDGT-IYFGS---DKVYAINPDGT---EKWNFY-AGYWTVTRPAISEDGTIYVTSLD- 234 (330)
T ss_dssp T-SCEEEEEECSSCCCSCCEECTTCC-EEEES---SSEEEECTTSC---EEEEEC-CSSCCCSCCEECTTSCEEEEETT-
T ss_pred C-CCEeEEEecCCCceeeeEEcCCCE-EEEEe---CEEEEECCCCc---EEEEEc-cCCcceeceEECCCCeEEEEcCC-
Confidence 8 65432 222223345567777776 88886 67999983221 111111 12234677899999999999975
Q ss_pred chhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCC
Q 023085 201 DARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSN 279 (287)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~ 279 (287)
++|++++++++.++.+..... ....+..+ +++||+++.. +
T Consensus 235 ----------------------------------~gl~~~~~~g~~~~~~~~~~~----~~~~~~~~~~g~l~v~t~~-g 275 (330)
T 3hxj_A 235 ----------------------------------GHLYAINPDGTEKWRFKTGKR----IESSPVIGNTDTIYFGSYD-G 275 (330)
T ss_dssp ----------------------------------TEEEEECTTSCEEEEEECSSC----CCSCCEECTTSCEEEECTT-C
T ss_pred ----------------------------------CeEEEECCCCCEeEEeeCCCC----ccccceEcCCCeEEEecCC-C
Confidence 489999999999888875432 22344555 7999999875 3
Q ss_pred eEEEEe
Q 023085 280 FIGKVQ 285 (287)
Q Consensus 280 ~i~~~~ 285 (287)
.|.+++
T Consensus 276 gl~~~d 281 (330)
T 3hxj_A 276 HLYAIN 281 (330)
T ss_dssp EEEEEC
T ss_pred CEEEEC
Confidence 566665
No 57
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.58 E-value=8.1e-14 Score=123.38 Aligned_cols=200 Identities=12% Similarity=0.081 Sum_probs=134.9
Q ss_pred ccccCeEECCC---CcEEEEeCCCceEEEc-cCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeee
Q 023085 33 QTLVGLTSTKE---GHLIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDI 107 (287)
Q Consensus 33 ~~~~~i~~d~d---g~l~v~~~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~ 107 (287)
.|. ++++|++ |+||+++..+.|.+++ .++ ++.+.. .+..|++|+++++|+||+++...
T Consensus 140 ~P~-gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-----~~~~P~giavd~dG~lyVad~~~----------- 202 (433)
T 4hw6_A 140 NIW-RMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-----NIGQCADVNFTLNGDMVVVDDQS----------- 202 (433)
T ss_dssp CCC-EEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-----CCSCEEEEEECTTCCEEEEECCS-----------
T ss_pred CCc-eEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-----CCCCccEEEECCCCCEEEEcCCC-----------
Confidence 467 8999985 8999998767899999 577 666533 34679999999999999997541
Q ss_pred eccCCCceEEEEeCCCCee-EEeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCccee
Q 023085 108 LEGKPHGQLLKYDPSSNIT-TLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNIN 186 (287)
Q Consensus 108 ~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 186 (287)
......++.++...+.. ......+..|++++++++...||+++...++|++++.++..... ..+.......+.+++
T Consensus 203 --~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~-~~~~~~~~~~~~~ia 279 (433)
T 4hw6_A 203 --SDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTE-EEVMMDTKGSNFHIV 279 (433)
T ss_dssp --CTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEE-EEEECSCCSSCEEEE
T ss_pred --CcccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEE-EEeccCCCCCcccEE
Confidence 01123466666542221 11222467899999999544599999988999999976333211 112111223456799
Q ss_pred eCCCCC-EEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCC--cEE---EEEECC-------
Q 023085 187 LAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDG--TII---RNLVDP------- 253 (287)
Q Consensus 187 ~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g--~~~---~~~~~~------- 253 (287)
+|++|+ ||++... ...|.+++.++ ..+ ..+...
T Consensus 280 ~dpdG~~LYvad~~----------------------------------~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~ 325 (433)
T 4hw6_A 280 WHPTGDWAYIIYNG----------------------------------KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWV 325 (433)
T ss_dssp ECTTSSEEEEEETT----------------------------------TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCB
T ss_pred EeCCCCEEEEEeCC----------------------------------CCEEEEEeCCCCCcccCcEEEEEecCCCCccC
Confidence 999997 9999976 24788876542 211 122111
Q ss_pred CC----ccccceEEEEE---------e-CCEEEEEecCCCeEEEEeC
Q 023085 254 TG----QLMSFVTSGLQ---------V-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 254 ~~----~~~~~~~~~~~---------~-~g~l~i~~~~~~~i~~~~~ 286 (287)
+| ..++.+..++. + +|+|||+...+++|.+++-
T Consensus 326 dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 326 DGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp CEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 11 13566888887 5 6899999999999999874
No 58
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.57 E-value=7.8e-13 Score=112.49 Aligned_cols=196 Identities=15% Similarity=0.150 Sum_probs=130.9
Q ss_pred CccccCeEECCCCcEEEEeCC-CceEEEc-cCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeee
Q 023085 32 SQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDIL 108 (287)
Q Consensus 32 ~~~~~~i~~d~dg~l~v~~~~-~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~ 108 (287)
..+. +++++++|+||+++.. .+|++++ .++ ...+... ....|.+++++++|++|++....
T Consensus 45 ~~~~-~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~----~~~~~~~i~~~~dg~l~v~~~~~------------ 107 (333)
T 2dg1_A 45 LQLE-GLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVS----HKANPAAIKIHKDGRLFVCYLGD------------ 107 (333)
T ss_dssp CCEE-EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC----SSSSEEEEEECTTSCEEEEECTT------------
T ss_pred cccc-CcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeC----CCCCcceEEECCCCcEEEEeCCC------------
Confidence 3456 8899999999987544 5799999 556 5554321 12468899999999999975320
Q ss_pred ccCCCceEEEEeCCCCeeEEeec---cccccceEEEccCCCEEEEEeCC------CCEEEEEEecCCCCcceeEEeccCC
Q 023085 109 EGKPHGQLLKYDPSSNITTLVAD---GFYFANGVALSRDEDYVVVCESW------KFRCRKYWLKGERKGKLETFAENLP 179 (287)
Q Consensus 109 ~~~~~~~v~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~l~v~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~ 179 (287)
....+.|++++++++++..+.. ....++.++++|+++ +|++... ...|++++.++.+ ...+.. ..
T Consensus 108 -~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~-~~ 181 (333)
T 2dg1_A 108 -FKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRT---VTPIIQ-NI 181 (333)
T ss_dssp -SSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCC---EEEEEE-EE
T ss_pred -CCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCE---EEEeec-CC
Confidence 0012579999988776653322 234578899999997 8888764 3578888865422 222221 11
Q ss_pred CCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC--CCcEEEEEE-----
Q 023085 180 GAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE--DGTIIRNLV----- 251 (287)
Q Consensus 180 ~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~g~~~~~~~----- 251 (287)
..|.+++++++|+ ||++... .+.|.+++. +++.+..+.
T Consensus 182 ~~~~~i~~~~dg~~l~v~~~~----------------------------------~~~i~~~d~~~~g~~~~~~~~~~~~ 227 (333)
T 2dg1_A 182 SVANGIALSTDEKVLWVTETT----------------------------------ANRLHRIALEDDGVTIQPFGATIPY 227 (333)
T ss_dssp SSEEEEEECTTSSEEEEEEGG----------------------------------GTEEEEEEECTTSSSEEEEEEEEEE
T ss_pred CcccceEECCCCCEEEEEeCC----------------------------------CCeEEEEEecCCCcCcccccceEEE
Confidence 2478899999996 8998754 247888876 444433221
Q ss_pred CCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 252 DPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 252 ~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
...+ ...+..++++ +|+||+++...+.|.+++.
T Consensus 228 ~~~~--~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 228 YFTG--HEGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp ECCS--SSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred ecCC--CCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 1111 1356778876 6999999988889999875
No 59
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.57 E-value=6.6e-13 Score=116.43 Aligned_cols=172 Identities=13% Similarity=0.096 Sum_probs=121.0
Q ss_pred CCCcEEEEe-cCCeEEEEE-CC-----ceEEEEe-eCCccccCeEECC-CCcEEEEeCC-CceEEEccCC--cEEEeeec
Q 023085 3 KNGVIYTAT-RDGWIKRLQ-DG-----TWVNWKF-IDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--VENFLSYV 70 (287)
Q Consensus 3 ~~G~l~~~~-~~g~i~~~~-~~-----~~~~~~~-~~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~~~g--~~~~~~~~ 70 (287)
.++.||+++ .+++|++++ ++ ....+.. ....|. ++++|. .++||+++.. +.|.+++.+| .+.+...
T Consensus 122 ~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~- 199 (400)
T 3p5b_L 122 ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE- 199 (400)
T ss_dssp TTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE-EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC-
T ss_pred ccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc-cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC-
Confidence 367899988 568899998 54 2233322 345678 999997 6789999866 4688888666 4444321
Q ss_pred CCccccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccccccceEEEccCCCEE
Q 023085 71 NGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYV 148 (287)
Q Consensus 71 ~~~~~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~l 148 (287)
.+..|.+|++|+ .|.||++|.+ ..+.|++++++......+ ...+..|+||+++++++.|
T Consensus 200 ---~~~~P~~iavdp~~g~ly~td~~----------------~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~l 260 (400)
T 3p5b_L 200 ---NGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRL 260 (400)
T ss_dssp ---SSCCEEEEEEETTTTEEEEEECS----------------SSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEE
T ss_pred ---CCCCcceEEEecccCeEEEEeCC----------------CCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEE
Confidence 245789999997 6789998643 235799999874333333 3457899999999988899
Q ss_pred EEEeCCCCEEEEEEecCCCCcceeEEecc--CCCCCcceeeCCCCCEEEEEec
Q 023085 149 VVCESWKFRCRKYWLKGERKGKLETFAEN--LPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 149 ~v~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
||+++..++|.++++++.. .+.+... ....|.+++++. ++||++...
T Consensus 261 Y~aD~~~~~I~~~d~dG~~---~~~~~~~~~~l~~P~gl~v~~-~~lywtd~~ 309 (400)
T 3p5b_L 261 YWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFE-DKVFWTDII 309 (400)
T ss_dssp EEEETTTTEEEEEETTSCC---CEEEEECSSTTSSEEEEEEET-TEEEEEESS
T ss_pred EEEECCCCEEEEEeCCCCc---cEEEEeCCCCCCCCEEEEEeC-CEEEEecCC
Confidence 9999999999999987632 2233321 234689999964 468888766
No 60
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.56 E-value=7.2e-13 Score=111.53 Aligned_cols=203 Identities=12% Similarity=0.010 Sum_probs=133.9
Q ss_pred eEEEEeeCCccccCeEECCCCcEEEE--------eCCCceEEEc-cCC-cEEEeeecCCccccccceEEEcCC-CcEEEE
Q 023085 24 WVNWKFIDSQTLVGLTSTKEGHLIIC--------DNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASD-GSLYFT 92 (287)
Q Consensus 24 ~~~~~~~~~~~~~~i~~d~dg~l~v~--------~~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~-g~l~v~ 92 (287)
++.+......|. +++++++|+||++ ...++|++++ .++ .+.+...........|.+++++++ |++|++
T Consensus 10 ~~~~~~~~~~~~-~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~ 88 (314)
T 1pjx_A 10 FTKVTEDIPGAE-GPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA 88 (314)
T ss_dssp CEEEECCCTTCE-EEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE
T ss_pred HhhhhccCCCcc-CceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE
Confidence 334444445677 8999999999998 4446799999 677 655532100112246889999999 999997
Q ss_pred cCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-ec-----cccccceEEEccCCCEEEEEeCCC-----------
Q 023085 93 VSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-AD-----GFYFANGVALSRDEDYVVVCESWK----------- 155 (287)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~-----~~~~~~~i~~~~~~~~l~v~~~~~----------- 155 (287)
+. ..+|++++++ +++..+ .. ....+++++++++|+ +|+++...
T Consensus 89 ~~------------------~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 89 DM------------------RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp ET------------------TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTT
T ss_pred EC------------------CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccc
Confidence 42 2379999988 777655 32 124578999999987 88888654
Q ss_pred ----CEEEEEEecCCCCcceeEEeccCCCCCcceeeC----CCC-CEEEEEeccchhHHHHhhcchhHHHHHHhCCcccc
Q 023085 156 ----FRCRKYWLKGERKGKLETFAENLPGAPDNINLA----PDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFS 226 (287)
Q Consensus 156 ----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d----~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (287)
.+|++++.+ .+ ...+.. ....|.+++++ ++| .||++...
T Consensus 149 ~~~~~~l~~~~~~-g~---~~~~~~-~~~~~~~i~~~~~~d~dg~~l~v~~~~--------------------------- 196 (314)
T 1pjx_A 149 QEKFGSIYCFTTD-GQ---MIQVDT-AFQFPNGIAVRHMNDGRPYQLIVAETP--------------------------- 196 (314)
T ss_dssp SSSCEEEEEECTT-SC---EEEEEE-EESSEEEEEEEECTTSCEEEEEEEETT---------------------------
T ss_pred cCCCCeEEEECCC-CC---EEEecc-CCCCcceEEEecccCCCCCEEEEEECC---------------------------
Confidence 578888854 22 222221 11257889998 998 68998764
Q ss_pred ccccCCCceEEEEECCC--CcEE--EEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 227 QFITLGGGAHLIHVAED--GTII--RNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 227 ~~~~~~~~~~v~~~~~~--g~~~--~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
.++|.+++.+ ++.. ..+..-.+.....+..++.+ +|+||+++..++.|.+++.
T Consensus 197 -------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~ 254 (314)
T 1pjx_A 197 -------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGP 254 (314)
T ss_dssp -------TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred -------CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcC
Confidence 2478888753 4321 12221111111346777776 6999999988889999875
No 61
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.55 E-value=2.1e-12 Score=119.12 Aligned_cols=217 Identities=13% Similarity=0.197 Sum_probs=152.5
Q ss_pred EEEEecCCeEEEEE-C-CceEEEEee---CCccccCeEECC-CCcEEEEeCC-CceEEEccCC--cEEEeeecCCccccc
Q 023085 7 IYTATRDGWIKRLQ-D-GTWVNWKFI---DSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--VENFLSYVNGSKLRF 77 (287)
Q Consensus 7 l~~~~~~g~i~~~~-~-~~~~~~~~~---~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~~~g--~~~~~~~~~~~~~~~ 77 (287)
|.+++ .+.|.++. + ........+ ...+. ++++|+ +++||+++.. ..|++++.+| .+.+... .+..
T Consensus 320 Ll~~~-~~~i~~i~l~~~~~~~~~~~~~~l~~~~-~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~----~~~~ 393 (619)
T 3s94_A 320 LLLAR-RTDLRRISLDTPDFTDIVLQLEDIRHAI-AIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTA----QIAH 393 (619)
T ss_dssp EEEEE-SSCEEEEESSSTTCCCEECCCSCCSSEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS----SCSC
T ss_pred EEEEc-ccceEEEecCCCccceeEEeccccCccE-EEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEEC----CCCC
Confidence 55553 45677777 2 222222211 23566 888886 6799999865 4688888665 5554321 2468
Q ss_pred cceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccccccceEEEccCCCEEEEEeCCC
Q 023085 78 ANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYVVVCESWK 155 (287)
Q Consensus 78 ~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~l~v~~~~~ 155 (287)
|.+|++|. .++||++|.. .+.|.+.+++....+.+ ...+..|.+|+++|....|||++...
T Consensus 394 p~GlAvD~~~~~lY~tD~~-----------------~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~ 456 (619)
T 3s94_A 394 PDGIAVDWVARNLYWTDTG-----------------TDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGE 456 (619)
T ss_dssp CCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSS
T ss_pred cCceEEecccCcEEEEeCC-----------------CCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCC
Confidence 89999995 6789998744 46788888774333333 34678899999999877899999764
Q ss_pred -CEEEEEEecCCCCcceeEEeccCCCCCcceeeCC-CCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCC
Q 023085 156 -FRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGG 233 (287)
Q Consensus 156 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
.+|.++++++.. ...+....-..|+||++|. +++||++...
T Consensus 457 ~~~I~r~~~dG~~---~~~l~~~~l~~P~GlalD~~~~~LY~aD~~---------------------------------- 499 (619)
T 3s94_A 457 IPKIERAALDGSD---RVVLVNTSLGWPNGLALDYDEGKIYWGDAK---------------------------------- 499 (619)
T ss_dssp SCEEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEETT----------------------------------
T ss_pred CCEEEEEccCCCc---cEEEEeCCCCCCeeeEEcccCCEEEEEECC----------------------------------
Confidence 789999987632 2233333335799999996 6799999876
Q ss_pred ceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEeC
Q 023085 234 GAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 234 ~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|.+++.+|...+.+.. .+ +..+.++...+++||++.....+|.+++.
T Consensus 500 ~~~I~~~~~dG~~~~~~~~-~~--l~~P~glav~~~~ly~tD~~~~~I~~~~k 549 (619)
T 3s94_A 500 TDKIEVMNTDGTGRRVLVE-DK--IPHIFGFTLLGDYVYWTDWQRRSIERVHK 549 (619)
T ss_dssp TTEEEEEESSSCCCEEEEE-CC--CCSSCCEEEETTEEEEECTTSSCEEEEES
T ss_pred CCEEEEEecCCCceEEEec-cC--CCCcEEEEEECCEEEEeecCCCeEEEEEc
Confidence 3589999998876655532 12 34567788888899999999999999874
No 62
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.55 E-value=1.1e-12 Score=121.03 Aligned_cols=217 Identities=12% Similarity=0.063 Sum_probs=147.1
Q ss_pred EEEEecCCeEEEEE-CCc---eEEEEeeCCccccCeEECC-CCcEEEEeCC-CceEEEccCC-c--EEEeeecCCccccc
Q 023085 7 IYTATRDGWIKRLQ-DGT---WVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG-V--ENFLSYVNGSKLRF 77 (287)
Q Consensus 7 l~~~~~~g~i~~~~-~~~---~~~~~~~~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~~~g-~--~~~~~~~~~~~~~~ 77 (287)
|.++ ....|.+++ ++. ..........|. ++++++ +++||+++.. ..|++++.+| . +.+.. ..+..
T Consensus 12 ~~~~-~~~~I~~i~~~~~~~~~~~~~~~~~~~~-~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~----~~~~~ 85 (619)
T 3s94_A 12 LLYA-NRRDLRLVDATNGKENATIVVGGLEDAA-AVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV----SGLLS 85 (619)
T ss_dssp EEEE-CSSBEEEECCC---------CBCCSCEE-EEEEETTTTEEEEEETTTTEEEEEEC-----CEEEEC----SSCSC
T ss_pred EEEe-ccccEEEEeCCCCcceEEEEEcCCCceE-EEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEe----CCCCC
Confidence 3444 456788888 443 222233345677 899986 6689999876 4588888655 2 33321 12457
Q ss_pred cceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee-ccccccceEEEccCCCEEEEEeCC-
Q 023085 78 ANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCESW- 154 (287)
Q Consensus 78 ~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~l~v~~~~- 154 (287)
|.+|++|. .++||++|.. .+.|.+++++....+.+. ..+..|.+|+++|.++.|||++..
T Consensus 86 P~GlAvD~~~~~ly~~d~~-----------------~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~ 148 (619)
T 3s94_A 86 PDGLACDWLGEKLYWTDSE-----------------TNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGE 148 (619)
T ss_dssp EEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSS
T ss_pred cCeEEEEecCCEEEEEeCC-----------------CCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCC
Confidence 99999998 5789998643 568999998744333443 567889999999988889999965
Q ss_pred CCEEEEEEecCCCCcceeEEeccCCCCCcceeeCC-CCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCC
Q 023085 155 KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGG 233 (287)
Q Consensus 155 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
..+|+++++++.. ...+.......|.+|++|. +++||++...
T Consensus 149 ~~~I~r~~~dG~~---~~~l~~~~~~~P~Glald~~~~~LY~aD~~---------------------------------- 191 (619)
T 3s94_A 149 VPKIERAGMDGSS---RFIIINSEIYWPNGLTLDYEEQKLYWADAK---------------------------------- 191 (619)
T ss_dssp SCEEEEEETTSCS---CEEEECSSCSSEEEEEEETTTTEEEEEETT----------------------------------
T ss_pred CCEEEEEECCCCc---eEEEEeCCCCCCcEEEEEccCCEEEEEeCC----------------------------------
Confidence 4689999987632 2233322334799999997 5789999876
Q ss_pred ceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEeC
Q 023085 234 GAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 234 ~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|.+++.+|...+.+.. + ....+.++...+++||++....++|.+++.
T Consensus 192 ~~~I~~~~~dG~~~~~~~~--~-~~~~P~gi~~~~~~ly~td~~~~~V~~~d~ 241 (619)
T 3s94_A 192 LNFIHKSNLDGTNRQAVVK--G-SLPHPFALTLFEDILYWTDWSTHSILACNK 241 (619)
T ss_dssp TCCEEEESSSCCEEC------------CCCEEESSSEEEEECTTTCSEEEEES
T ss_pred CCeEEEecCCCCccEEEEe--C-CCCCceEEEEeCCEEEEecCCCCEEEEEEC
Confidence 3589999999877666542 1 134567788787899999999999999874
No 63
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.54 E-value=1.7e-11 Score=103.85 Aligned_cols=223 Identities=12% Similarity=0.076 Sum_probs=148.2
Q ss_pred CCcEEEEe-cCCeEEEEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeCC-CceEEEc-cCC-c-EEEeeecCCccc
Q 023085 4 NGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG-V-ENFLSYVNGSKL 75 (287)
Q Consensus 4 ~G~l~~~~-~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~-~gi~~~~-~~g-~-~~~~~~~~~~~~ 75 (287)
.+.+|++. .++.|..++ +++..........+. .++++++|+ +|++... ..|++++ .++ . ...... .
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-----~ 82 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE-----G 82 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE-----C
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc-----C
Confidence 34677766 678899999 566655444444455 889999996 8888763 5689999 666 5 333222 1
Q ss_pred cccce-EEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCC
Q 023085 76 RFAND-VVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESW 154 (287)
Q Consensus 76 ~~~~~-l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~ 154 (287)
..|.. ++++++|..+++... ....+.|+.+|..+++..........+++++++|+|+.+|+++..
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~--------------~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 148 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTG--------------LNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRS 148 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCC--------------SSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEET
T ss_pred CCCccceEECCCCCEEEEecC--------------CCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecC
Confidence 34556 899999985544211 001127999999888765554445567899999999989999877
Q ss_pred CCE-EEEEEecCC-CCcce-eEEeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHHhCCcccccccc
Q 023085 155 KFR-CRKYWLKGE-RKGKL-ETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFIT 230 (287)
Q Consensus 155 ~~~-l~~~~~~~~-~~~~~-~~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
.+. +..|+++.. ..... .... .....|.+++++++|+ +|++...
T Consensus 149 ~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~------------------------------- 196 (331)
T 3u4y_A 149 SANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLI------------------------------- 196 (331)
T ss_dssp TTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETT-------------------------------
T ss_pred CCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCC-------------------------------
Confidence 677 888887632 11111 1111 2234588999999997 8888765
Q ss_pred CCCceEEEEECCC-CcE---EEEEECCCCccccceEEEEEe--CCEEEEEecCCCeEEEEeC
Q 023085 231 LGGGAHLIHVAED-GTI---IRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 231 ~~~~~~v~~~~~~-g~~---~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|..++.+ ++. +..+... ..+..+... +..||+++...+.|.++++
T Consensus 197 ---~~~v~v~d~~~~~~~~~~~~~~~~-----~~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 197 ---GNSIGILETQNPENITLLNAVGTN-----NLPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp ---TTEEEEEECSSTTSCEEEEEEECS-----SCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred ---CCeEEEEECCCCcccceeeeccCC-----CCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 2467778765 555 5555532 234555554 4559999888888988886
No 64
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.54 E-value=1.7e-12 Score=119.87 Aligned_cols=171 Identities=13% Similarity=0.077 Sum_probs=127.5
Q ss_pred CCCcEEEEe-cCCeEEEEE-CCc-eEEEEeeC-CccccCeEECCC-CcEEEEeCC-CceEEEccCC--cEEEeeecCCcc
Q 023085 3 KNGVIYTAT-RDGWIKRLQ-DGT-WVNWKFID-SQTLVGLTSTKE-GHLIICDNA-NGLHKVSEDG--VENFLSYVNGSK 74 (287)
Q Consensus 3 ~~G~l~~~~-~~g~i~~~~-~~~-~~~~~~~~-~~~~~~i~~d~d-g~l~v~~~~-~gi~~~~~~g--~~~~~~~~~~~~ 74 (287)
.+|.||+++ .+++|.+++ +|. .+.+.... ..|. ++++|.. ++||+++.. +.|.+++.+| .+.+.. ..
T Consensus 47 ~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~-GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~----~~ 121 (628)
T 4a0p_A 47 TDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPE-GMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW----KD 121 (628)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC----SS
T ss_pred CCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcc-eEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe----CC
Confidence 357899887 678999998 553 33333332 4688 9999965 689999876 4588888666 444432 23
Q ss_pred ccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeC
Q 023085 75 LRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCES 153 (287)
Q Consensus 75 ~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~ 153 (287)
+..|.+|++|+ +|.||++|.+ ....|++++++......+...+..|+|++++++++.|||++.
T Consensus 122 l~~P~~iavdp~~G~lY~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 122 LDSPRALALDPAEGFMYWTEWG----------------GKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDL 185 (628)
T ss_dssp CCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEET
T ss_pred CCCcccEEEccCCCeEEEeCCC----------------CCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEEC
Confidence 46799999996 7899998743 246899999885555556667889999999999889999999
Q ss_pred CCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 154 WKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
..++|.++++++... +.+. .....|.+++++. ++||++...
T Consensus 186 ~~~~I~~~d~dG~~~---~v~~-~~l~~P~glav~~-~~ly~tD~~ 226 (628)
T 4a0p_A 186 DTNLIESSNMLGLNR---EVIA-DDLPHPFGLTQYQ-DYIYWTDWS 226 (628)
T ss_dssp TTTEEEEEETTSCSC---EEEE-ECCSCEEEEEEET-TEEEEEETT
T ss_pred CCCEEEEEcCCCCce---EEee-ccCCCceEEEEEC-CEEEEecCC
Confidence 999999999876322 2333 2334699999986 689999975
No 65
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.54 E-value=8.6e-13 Score=116.75 Aligned_cols=198 Identities=11% Similarity=0.073 Sum_probs=133.6
Q ss_pred ccccCeEECC--CCcEEEEeCCCceEEEc-cCC-cEEEeeecCCccccccceEEEcCCCc-EEEEcCCCCCCCcceeeee
Q 023085 33 QTLVGLTSTK--EGHLIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDI 107 (287)
Q Consensus 33 ~~~~~i~~d~--dg~l~v~~~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~ 107 (287)
.|. ++++|+ +|+||+++..+.|.+++ ..+ ++.+.. ....|.+|+++++|. ||+++...
T Consensus 138 ~P~-~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-----~~~~P~~ia~d~~G~~lyvad~~~----------- 200 (430)
T 3tc9_A 138 GAV-WLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-----GLSKVRTICWTHEADSMIITNDQN----------- 200 (430)
T ss_dssp CCC-EEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-----CCSCEEEEEECTTSSEEEEEECCS-----------
T ss_pred CCC-EEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-----CCCCcceEEEeCCCCEEEEEeCCC-----------
Confidence 567 899996 58999998766799999 455 666543 245789999999997 99987541
Q ss_pred eccCCCceEEEEeCCCCeeE--EeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcce
Q 023085 108 LEGKPHGQLLKYDPSSNITT--LVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNI 185 (287)
Q Consensus 108 ~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i 185 (287)
......++.++.+ +.+. .....+..|++++++|++..||+++...++|++++.++.... ..........|.++
T Consensus 201 --~~~~~~v~~~~~~-g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~--~~~~~~~~~~P~gi 275 (430)
T 3tc9_A 201 --NNDRPNNYILTRE-SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT--PLFTIQDSGWEFHI 275 (430)
T ss_dssp --CTTSEEEEEEEGG-GTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE--EEEECSSSSCCEEE
T ss_pred --CcccceEEEEeCC-CceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE--EEEEcCCCCcceeE
Confidence 0112346666654 3222 122246789999999955559999999999999997643211 11211122469999
Q ss_pred eeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCc--EE---EEEECC------
Q 023085 186 NLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGT--II---RNLVDP------ 253 (287)
Q Consensus 186 ~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~--~~---~~~~~~------ 253 (287)
++|++|+ ||++... ...|.+++.++. .+ ..+...
T Consensus 276 a~~pdG~~lyv~d~~----------------------------------~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~ 321 (430)
T 3tc9_A 276 QFHPSGNYAYIVVVN----------------------------------QHYILRSDYDWKTKRLTTPYIVCGQQGAKDW 321 (430)
T ss_dssp EECTTSSEEEEEETT----------------------------------TTEEEEEEEETTTTEECCCEEEEECTTCBCC
T ss_pred EEcCCCCEEEEEECC----------------------------------CCEEEEEeCCcccccccceEEEeccCCCCCC
Confidence 9999998 9999876 357888876642 21 122211
Q ss_pred -CC----ccccceE-EEEEe---------CCEEEEEecCCCeEEEEeC
Q 023085 254 -TG----QLMSFVT-SGLQV---------DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 254 -~~----~~~~~~~-~~~~~---------~g~l~i~~~~~~~i~~~~~ 286 (287)
++ ..++.+. .++.+ +++||++...+++|.+++-
T Consensus 322 ~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~ 369 (430)
T 3tc9_A 322 VDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP 369 (430)
T ss_dssp BCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT
T ss_pred CCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC
Confidence 11 1245566 56653 4799999999999999863
No 66
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.53 E-value=1.7e-11 Score=104.71 Aligned_cols=229 Identities=14% Similarity=0.069 Sum_probs=137.1
Q ss_pred cEEEEec----CCeEEEEE----CCceEEEE--eeCCccccCeEECCCCcEEEEeCC---CceEEEc-cCC-cEEEeeec
Q 023085 6 VIYTATR----DGWIKRLQ----DGTWVNWK--FIDSQTLVGLTSTKEGHLIICDNA---NGLHKVS-EDG-VENFLSYV 70 (287)
Q Consensus 6 ~l~~~~~----~g~i~~~~----~~~~~~~~--~~~~~~~~~i~~d~dg~l~v~~~~---~gi~~~~-~~g-~~~~~~~~ 70 (287)
.+|+|+. +.+|+.|. +++.+... .....|. .+++++||+||++... ..|+.++ .++ .+.+....
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~-~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~ 82 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPT-YLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVV 82 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCC-CEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcc-eEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeee
Confidence 5899973 34555554 46655432 3345677 9999999998888642 4688888 666 55543311
Q ss_pred CCccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCC-CCeeEEee---cc---------cccc
Q 023085 71 NGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SNITTLVA---DG---------FYFA 136 (287)
Q Consensus 71 ~~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~---~~---------~~~~ 136 (287)
.....|..++++++|+ ||+++. ..+.+..++.. ++....+. .. ...+
T Consensus 83 --~~~~~p~~~a~spdg~~l~~~~~-----------------~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~ 143 (347)
T 3hfq_A 83 --APGTPPAYVAVDEARQLVYSANY-----------------HKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHI 143 (347)
T ss_dssp --EESCCCSEEEEETTTTEEEEEET-----------------TTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCE
T ss_pred --cCCCCCEEEEECCCCCEEEEEeC-----------------CCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCc
Confidence 1134688999999997 666532 13444444432 24433321 11 1235
Q ss_pred ceEEEccCCCEEEEEeCCCCEEEEEEec-CCCCcceeEEeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhH
Q 023085 137 NGVALSRDEDYVVVCESWKFRCRKYWLK-GERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLI 214 (287)
Q Consensus 137 ~~i~~~~~~~~l~v~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~ 214 (287)
+.++++|+++ +|+++...+.|..|+++ ++++.....+.......|..++++++|+ +|++....
T Consensus 144 ~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-------------- 208 (347)
T 3hfq_A 144 HYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS-------------- 208 (347)
T ss_dssp EEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT--------------
T ss_pred eEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC--------------
Confidence 6799999999 99999888899999987 3222222222212223578899999998 77766541
Q ss_pred HHHHHhCCccccccccCCCceEEEEECCC-CcE--EEEEEC-CCCc-cccceEEEEEe-C-CEEEEEecCCCeEEEEeCC
Q 023085 215 KHVLAAYPKLFSQFITLGGGAHLIHVAED-GTI--IRNLVD-PTGQ-LMSFVTSGLQV-D-NHLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~--~~~~~~-~~~~-~~~~~~~~~~~-~-g~l~i~~~~~~~i~~~~~~ 287 (287)
....++.++.+ ++. +..+.. +.+. ....+..+..+ + ..||+++...+.|.+++++
T Consensus 209 ------------------~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 209 ------------------SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp ------------------TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred ------------------CEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 11234444542 332 222222 1110 11346666665 4 4699998888899988863
No 67
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.53 E-value=2.4e-12 Score=107.99 Aligned_cols=177 Identities=11% Similarity=0.105 Sum_probs=115.5
Q ss_pred CCCcEEEEe-cCCeEEEEE-C-CceEEEEeeCC---------ccccCeEE---CCCCcEEEEeC--------------CC
Q 023085 3 KNGVIYTAT-RDGWIKRLQ-D-GTWVNWKFIDS---------QTLVGLTS---TKEGHLIICDN--------------AN 53 (287)
Q Consensus 3 ~~G~l~~~~-~~g~i~~~~-~-~~~~~~~~~~~---------~~~~~i~~---d~dg~l~v~~~--------------~~ 53 (287)
++|.+|+++ ..+.|.+++ + +..+.. ..+. .+. ++.+ |++|+||++.. ..
T Consensus 23 ~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~s-Gl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~ 100 (334)
T 2p9w_A 23 TRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMS-GLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGAS 100 (334)
T ss_dssp TTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEE-EEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCC
T ss_pred CCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceee-EEEEeccCCCCcEEEEEcccccccccccccCCCC
Confidence 468999999 789999999 4 555444 2221 235 8999 79999999532 24
Q ss_pred ceEEEc-c---CC-cEEEeeecC---------CccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCC-ceEEE
Q 023085 54 GLHKVS-E---DG-VENFLSYVN---------GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPH-GQLLK 118 (287)
Q Consensus 54 gi~~~~-~---~g-~~~~~~~~~---------~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~-~~v~~ 118 (287)
.++++| . ++ ......... +.....+++|++|++|++||+++. . +.|++
T Consensus 101 ~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~-----------------~~~~I~r 163 (334)
T 2p9w_A 101 SFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFAL-----------------GMPAIAR 163 (334)
T ss_dssp EEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEE-----------------SSCEEEE
T ss_pred EEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCC-----------------CCCeEEE
Confidence 599999 6 46 333322110 112245899999999999998533 3 67999
Q ss_pred EeCCCCeeEEeec------cccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEe-c--cCCCCCcce-eeC
Q 023085 119 YDPSSNITTLVAD------GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFA-E--NLPGAPDNI-NLA 188 (287)
Q Consensus 119 ~~~~~~~~~~~~~------~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~-~--~~~~~~~~i-~~d 188 (287)
++++......... ....++||++.|+++.|++.++ .++|++||+..+.......-. . .....+++| ...
T Consensus 164 V~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~ 242 (334)
T 2p9w_A 164 VSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVP 242 (334)
T ss_dssp ECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEE
T ss_pred EeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcccccccc
Confidence 9998443433211 1234679999999999999998 899999998743110011100 0 012247885 666
Q ss_pred CCCCE-EEEEec
Q 023085 189 PDGTF-WIAIIK 199 (287)
Q Consensus 189 ~~G~l-wv~~~~ 199 (287)
.+|++ +|+...
T Consensus 243 ~~G~vllV~~~~ 254 (334)
T 2p9w_A 243 VGNESVLVGARA 254 (334)
T ss_dssp ETTEEEEEEEET
T ss_pred cCCEEEEEEcCC
Confidence 78987 555543
No 68
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.52 E-value=1.2e-11 Score=103.01 Aligned_cols=213 Identities=13% Similarity=0.159 Sum_probs=143.8
Q ss_pred CCcEEEEecCCeEEEEE--CCceEEEEeeCC--ccccCeEECCCCcEEEEeCCCceEEEccCC--cEEEeeecCCccccc
Q 023085 4 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDS--QTLVGLTSTKEGHLIICDNANGLHKVSEDG--VENFLSYVNGSKLRF 77 (287)
Q Consensus 4 ~G~l~~~~~~g~i~~~~--~~~~~~~~~~~~--~~~~~i~~d~dg~l~v~~~~~gi~~~~~~g--~~~~~~~~~~~~~~~ 77 (287)
+..|+.++.++.|+.++ +|+......... .+. ++.++++|+++++ ..++++.++++| +..+... . ...
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~-~~~~~pdG~ilvs-~~~~V~~~d~~G~~~W~~~~~-~---~~~ 78 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECN-SVAATKAGEILFS-YSKGAKMITRDGRELWNIAAP-A---GCE 78 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCC-EEEECTTSCEEEE-CBSEEEEECTTSCEEEEEECC-T---TCE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCc-CeEECCCCCEEEe-CCCCEEEECCCCCEEEEEcCC-C---Ccc
Confidence 33556666889999999 676643333322 355 8899999999995 457899999877 4444221 0 123
Q ss_pred cceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee------ccccccceEEEccCCCEEEEE
Q 023085 78 ANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA------DGFYFANGVALSRDEDYVVVC 151 (287)
Q Consensus 78 ~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~~~~~~~~i~~~~~~~~l~v~ 151 (287)
+..+...++|.+++++.. ..+.|+.++++...+..+. .....+.++.++++|+ ++++
T Consensus 79 ~~~~~~~~dG~~lv~~~~----------------~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~ 141 (276)
T 3no2_A 79 MQTARILPDGNALVAWCG----------------HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVP 141 (276)
T ss_dssp EEEEEECTTSCEEEEEES----------------TTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEE
T ss_pred ccccEECCCCCEEEEecC----------------CCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCC-EEEE
Confidence 456778889999986422 1457888887533233222 1123456778889998 5667
Q ss_pred eCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccC
Q 023085 152 ESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 231 (287)
Q Consensus 152 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
....++|..||.++.. ...+. ..+.|.++...++|+++++...
T Consensus 142 ~~~~~~v~~~d~~G~~---~w~~~--~~~~~~~~~~~~~g~~~v~~~~-------------------------------- 184 (276)
T 3no2_A 142 LFATSEVREIAPNGQL---LNSVK--LSGTPFSSAFLDNGDCLVACGD-------------------------------- 184 (276)
T ss_dssp ETTTTEEEEECTTSCE---EEEEE--CSSCCCEEEECTTSCEEEECBT--------------------------------
T ss_pred ecCCCEEEEECCCCCE---EEEEE--CCCCccceeEcCCCCEEEEeCC--------------------------------
Confidence 7778899999976321 12222 2345788888999999998876
Q ss_pred CCceEEEEECCC-CcEEEEEECCC--CccccceEEEEEe-CCEEEEEecCC
Q 023085 232 GGGAHLIHVAED-GTIIRNLVDPT--GQLMSFVTSGLQV-DNHLYVISLTS 278 (287)
Q Consensus 232 ~~~~~v~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~-~g~l~i~~~~~ 278 (287)
.+.|+.++++ |+.++.+...+ +..+..++++... +|++|++++.+
T Consensus 185 --~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 185 --AHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp --TSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECT
T ss_pred --CCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccC
Confidence 3589999998 99999997532 3335567777775 79999999744
No 69
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.50 E-value=2.7e-12 Score=114.26 Aligned_cols=207 Identities=12% Similarity=0.109 Sum_probs=138.3
Q ss_pred ccccCeEECC--CCcEEEEeCC-CceEEEc-cCC-cEEEeeecCCccccccceEEE-------cCCCc-EEEEcCCCCCC
Q 023085 33 QTLVGLTSTK--EGHLIICDNA-NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVE-------ASDGS-LYFTVSSSKYL 99 (287)
Q Consensus 33 ~~~~~i~~d~--dg~l~v~~~~-~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~-------d~~g~-l~v~~~~~~~~ 99 (287)
.|. +|++|| +++||++... ++|.++| .++ ++.+..... ..+..|.+|++ +++|. ||+++....-.
T Consensus 140 ~p~-~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~-~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 140 DNG-RLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINT-IPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp SEE-EEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTT-SSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred CCC-EEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCc-cccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 356 899997 4789999765 5799999 666 777654321 23567999999 99986 99987551000
Q ss_pred CcceeeeeeccCCCceEEEEeCCC-CeeE-----EeeccccccceEEEccCCCEEEEEeCCCCEEEEEEec-------CC
Q 023085 100 PHEYCLDILEGKPHGQLLKYDPSS-NITT-----LVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLK-------GE 166 (287)
Q Consensus 100 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~-----~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~-------~~ 166 (287)
.....++.++... +.+. ........|++++++|+++.||+++...++|++++++ ++
T Consensus 218 -----------~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg 286 (496)
T 3kya_A 218 -----------DESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNG 286 (496)
T ss_dssp -----------GGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTT
T ss_pred -----------ccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCc
Confidence 0123477776443 3432 1222456789999999877899999999999999987 44
Q ss_pred CCc-----c----eeE-EeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCce
Q 023085 167 RKG-----K----LET-FAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGA 235 (287)
Q Consensus 167 ~~~-----~----~~~-~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
... . ... +.......|.+|+++++|+ ||++... ..
T Consensus 287 ~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~----------------------------------~h 332 (496)
T 3kya_A 287 GSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN----------------------------------NH 332 (496)
T ss_dssp CCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETT----------------------------------TT
T ss_pred eeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCC----------------------------------CC
Confidence 331 0 112 2212234688999999998 8999876 35
Q ss_pred EEEEECCCCc--EE---EEEECC-------CC----ccccceE-EEEEe--------CCEEEEEecCCCeEEEEeC
Q 023085 236 HLIHVAEDGT--II---RNLVDP-------TG----QLMSFVT-SGLQV--------DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 236 ~v~~~~~~g~--~~---~~~~~~-------~~----~~~~~~~-~~~~~--------~g~l~i~~~~~~~i~~~~~ 286 (287)
.|.++++++. .+ ..+... +| -.++.+. .++.+ ++.|||+...+++|.+++.
T Consensus 333 ~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~ 408 (496)
T 3kya_A 333 YFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP 408 (496)
T ss_dssp EEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT
T ss_pred EEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC
Confidence 8888776542 22 222211 11 1356677 66664 4799999999999999874
No 70
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.50 E-value=6.1e-12 Score=105.66 Aligned_cols=186 Identities=8% Similarity=0.016 Sum_probs=125.4
Q ss_pred cccCeEECC-CCcEEEEeCC-CceEEEc-cCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeec
Q 023085 34 TLVGLTSTK-EGHLIICDNA-NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILE 109 (287)
Q Consensus 34 ~~~~i~~d~-dg~l~v~~~~-~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~ 109 (287)
+. +.+.++ +++||+++.. ..|++++ .++ .+.+.. ...|.+++++++|++|++.
T Consensus 15 ~E-gp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~------~~~~~~i~~~~dG~l~v~~---------------- 71 (297)
T 3g4e_A 15 GE-SPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTM------DAPVSSVALRQSGGYVATI---------------- 71 (297)
T ss_dssp EE-EEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC------SSCEEEEEEBTTSSEEEEE----------------
T ss_pred cc-CCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeC------CCceEEEEECCCCCEEEEE----------------
Confidence 44 777887 5678888755 5799999 455 544321 1367889999999999962
Q ss_pred cCCCceEEEEeCCCCeeEEeec-----cccccceEEEccCCCEEEEEeC-----------CCCEEEEEEecCCCCcceeE
Q 023085 110 GKPHGQLLKYDPSSNITTLVAD-----GFYFANGVALSRDEDYVVVCES-----------WKFRCRKYWLKGERKGKLET 173 (287)
Q Consensus 110 ~~~~~~v~~~~~~~~~~~~~~~-----~~~~~~~i~~~~~~~~l~v~~~-----------~~~~l~~~~~~~~~~~~~~~ 173 (287)
..+|+++|+++++++.+.. ....++.++++++|+ +|+++. ....|++++.++ +...
T Consensus 72 ---~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g----~~~~ 143 (297)
T 3g4e_A 72 ---GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDH----HVKK 143 (297)
T ss_dssp ---TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTS----CEEE
T ss_pred ---CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCC----CEEE
Confidence 3479999998888766543 234578899999998 888763 234788887543 1222
Q ss_pred EeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEEC---CCCcEE--
Q 023085 174 FAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA---EDGTII-- 247 (287)
Q Consensus 174 ~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~g~~~-- 247 (287)
... ....|++++++++|+ ||++... .+.|.+++ .+|...
T Consensus 144 ~~~-~~~~pngi~~spdg~~lyv~~~~----------------------------------~~~i~~~~~d~~~G~~~~~ 188 (297)
T 3g4e_A 144 YFD-QVDISNGLDWSLDHKIFYYIDSL----------------------------------SYSVDAFDYDLQTGQISNR 188 (297)
T ss_dssp EEE-EESBEEEEEECTTSCEEEEEEGG----------------------------------GTEEEEEEECTTTCCEEEE
T ss_pred Eee-ccccccceEEcCCCCEEEEecCC----------------------------------CCcEEEEeccCCCCcccCc
Confidence 221 123589999999985 8888765 24677775 335432
Q ss_pred EEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 248 RNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
+.+..... ....+.+++++ +|+||+++..+++|.+++.
T Consensus 189 ~~~~~~~~-~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~ 227 (297)
T 3g4e_A 189 RSVYKLEK-EEQIPDGMCIDAEGKLWVACYNGGRVIRLDP 227 (297)
T ss_dssp EEEEECCG-GGCEEEEEEEBTTSCEEEEEETTTEEEEECT
T ss_pred EEEEECCC-CCCCCCeeEECCCCCEEEEEcCCCEEEEEcC
Confidence 22321111 12357788887 7999999999999999975
No 71
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.48 E-value=8.3e-11 Score=100.22 Aligned_cols=209 Identities=13% Similarity=0.148 Sum_probs=139.3
Q ss_pred CCCCc-EEEEe-cCCeEEEEE--CCceEEEEeeCC----------ccccCeEECCCCc-EEEEeC--CCceEEEc-cCC-
Q 023085 2 DKNGV-IYTAT-RDGWIKRLQ--DGTWVNWKFIDS----------QTLVGLTSTKEGH-LIICDN--ANGLHKVS-EDG- 62 (287)
Q Consensus 2 d~~G~-l~~~~-~~g~i~~~~--~~~~~~~~~~~~----------~~~~~i~~d~dg~-l~v~~~--~~gi~~~~-~~g- 62 (287)
+++|. +|+++ .++.|..++ +++......... .|. +++++++|+ +|++.. ...|++++ .++
T Consensus 97 s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~ 175 (353)
T 3vgz_A 97 NNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPR-ELVADDATNTVYISGIGKESVIWVVDGGNIK 175 (353)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEE-EEEEETTTTEEEEEEESSSCEEEEEETTTTE
T ss_pred CCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCc-eEEECCCCCEEEEEecCCCceEEEEcCCCCc
Confidence 46775 88887 468899999 555533322211 145 789999986 788863 24599999 666
Q ss_pred cEEEeeecCCccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeec-----ccccc
Q 023085 63 VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-----GFYFA 136 (287)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~~ 136 (287)
....... ....|.+++++++|. +|+++ ..+.|+.+|..+++...... ....+
T Consensus 176 ~~~~~~~----~~~~~~~~~~s~dg~~l~~~~------------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 233 (353)
T 3vgz_A 176 LKTAIQN----TGKMSTGLALDSEGKRLYTTN------------------ADGELITIDTADNKILSRKKLLDDGKEHFF 233 (353)
T ss_dssp EEEEECC----CCTTCCCCEEETTTTEEEEEC------------------TTSEEEEEETTTTEEEEEEECCCSSSCCCE
T ss_pred eEEEecC----CCCccceEEECCCCCEEEEEc------------------CCCeEEEEECCCCeEEEEEEcCCCCCCccc
Confidence 3332221 113478899999886 66642 34678899998887654322 23346
Q ss_pred ceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHH
Q 023085 137 NGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIK 215 (287)
Q Consensus 137 ~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~ 215 (287)
.+++++|+++.+|+++...+.|..+|....+. ...+. . +.+.+++++++|+ +|++...
T Consensus 234 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~--~-~~~~~~~~s~dg~~l~v~~~~---------------- 292 (353)
T 3vgz_A 234 INISLDTARQRAFITDSKAAEVLVVDTRNGNI--LAKVA--A-PESLAVLFNPARNEAYVTHRQ---------------- 292 (353)
T ss_dssp EEEEEETTTTEEEEEESSSSEEEEEETTTCCE--EEEEE--C-SSCCCEEEETTTTEEEEEETT----------------
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCCcE--EEEEE--c-CCCceEEECCCCCEEEEEECC----------------
Confidence 67999999999999998888999999754322 11111 1 2367899999997 8888764
Q ss_pred HHHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCCccccceEEEEEe--CCEEEEEecC
Q 023085 216 HVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLT 277 (287)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~ 277 (287)
.+.|..++.+ ++.+..+.... .+..+... +..||++...
T Consensus 293 ------------------~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 293 ------------------AGKVSVIDAKSYKVVKTFDTPT-----HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ------------------TTEEEEEETTTTEEEEEEECCS-----EEEEEEECTTSCEEEEEEEC
T ss_pred ------------------CCeEEEEECCCCeEEEEEecCC-----CCCeEEEcCCCCEEEEEEcc
Confidence 3578889875 66666666432 35666664 4569998875
No 72
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.48 E-value=5.3e-12 Score=106.39 Aligned_cols=199 Identities=13% Similarity=0.116 Sum_probs=126.7
Q ss_pred eEEEEeeCCccccCeEECCCCc-EEEEeCC-CceEEEccCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCC
Q 023085 24 WVNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLP 100 (287)
Q Consensus 24 ~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~-~gi~~~~~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~ 100 (287)
.+.+......+. +++.+++|+ ||+++.. .+|++++++| .+.+... ...+++++++++|++|+++..
T Consensus 37 ~~~l~~~~~~~e-gp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~-----~~~~~gl~~d~dG~l~v~~~~----- 105 (305)
T 3dr2_A 37 LLTLYDQATWSE-GPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDA-----TAFTNGNAVDAQQRLVHCEHG----- 105 (305)
T ss_dssp CEEEECCCSSEE-EEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEES-----CSCEEEEEECTTSCEEEEETT-----
T ss_pred eEEEecCCcCcc-CCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCC-----CCccceeeECCCCCEEEEECC-----
Confidence 333333333445 788999997 6666544 6799998767 6555321 246789999999999997422
Q ss_pred cceeeeeeccCCCceEEEEeCCCCeeEEeecc-----ccccceEEEccCCCEEEEEeC-----------------CCCEE
Q 023085 101 HEYCLDILEGKPHGQLLKYDPSSNITTLVADG-----FYFANGVALSRDEDYVVVCES-----------------WKFRC 158 (287)
Q Consensus 101 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~l~v~~~-----------------~~~~l 158 (287)
...|++++++ ++++.+... ...|+.++++++|+ +|+++. ....|
T Consensus 106 ------------~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v 171 (305)
T 3dr2_A 106 ------------RRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSV 171 (305)
T ss_dssp ------------TTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEE
T ss_pred ------------CCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeE
Confidence 3579999986 766655322 24578899999997 888752 13578
Q ss_pred EEEEecCCCCcceeEEeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEE
Q 023085 159 RKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHL 237 (287)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 237 (287)
++++.++++... +. ....|++++++++|+ ||++..... ......|
T Consensus 172 ~~~d~~~g~~~~---~~--~~~~p~gl~~spdg~~lyv~~~~~~-----------------------------~~~~~~i 217 (305)
T 3dr2_A 172 YRLPPDGSPLQR---MA--DLDHPNGLAFSPDEQTLYVSQTPEQ-----------------------------GHGSVEI 217 (305)
T ss_dssp EEECSSSCCCEE---EE--EESSEEEEEECTTSSEEEEEECCC--------------------------------CCCEE
T ss_pred EEEcCCCCcEEE---Ee--cCCCCcceEEcCCCCEEEEEecCCc-----------------------------CCCCCEE
Confidence 999875433322 22 113588999999996 888876410 0001467
Q ss_pred EEECCCCcEEE---EEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 238 IHVAEDGTIIR---NLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 238 ~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
.+++.++..+. .+.... ...+.++.++ +|+||+++ ++.|.+|+.
T Consensus 218 ~~~~~~~~~l~~~~~~~~~~---~~~pdgi~~d~~G~lwv~~--~~gv~~~~~ 265 (305)
T 3dr2_A 218 TAFAWRDGALHDRRHFASVP---DGLPDGFCVDRGGWLWSSS--GTGVCVFDS 265 (305)
T ss_dssp EEEEEETTEEEEEEEEECCS---SSCCCSEEECTTSCEEECC--SSEEEEECT
T ss_pred EEEEecCCCccCCeEEEECC---CCCCCeEEECCCCCEEEec--CCcEEEECC
Confidence 77775433222 222111 1245667776 79999998 445888764
No 73
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.47 E-value=1.7e-11 Score=105.66 Aligned_cols=222 Identities=13% Similarity=0.093 Sum_probs=133.8
Q ss_pred ceEEEEeeCCccccCeEECCCCcEEEEeCCCceEEEccCC-cEEEeeec-CCccccccceEEEcCC----CcEEEEcCCC
Q 023085 23 TWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVSEDG-VENFLSYV-NGSKLRFANDVVEASD----GSLYFTVSSS 96 (287)
Q Consensus 23 ~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~~~g-~~~~~~~~-~~~~~~~~~~l~~d~~----g~l~v~~~~~ 96 (287)
+.+.+......|. ++++++||+|||++....|++++ ++ .+.+.... .......|.+|+++++ +.||+++...
T Consensus 22 ~~~~va~~l~~P~-~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~ 99 (352)
T 2ism_A 22 RVEEVVGGLEVPW-ALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVA 99 (352)
T ss_dssp CEEEEECCCSCEE-EEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEC
T ss_pred EEEEEECCCCCce-EEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecC
Confidence 4445555556788 99999999999999776788887 66 55443221 1112457899999997 7899975320
Q ss_pred CCCCcceeeeeeccCCCceEEEEeCCCCee---EEeec-------cccccceEEEccCCCEEEEEeC-------------
Q 023085 97 KYLPHEYCLDILEGKPHGQLLKYDPSSNIT---TLVAD-------GFYFANGVALSRDEDYVVVCES------------- 153 (287)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~-------~~~~~~~i~~~~~~~~l~v~~~------------- 153 (287)
. ......|++++...+.+ +.+.. ....+++++++|||. ||++..
T Consensus 100 ~------------~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~ 166 (352)
T 2ism_A 100 E------------GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLAS 166 (352)
T ss_dssp T------------TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTC
T ss_pred C------------CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCC
Confidence 0 00115688887654321 11111 123568999999995 999863
Q ss_pred CCCEEEEEEecCCC-----C-----cceeEEeccCCCCCcceeeCC-CCCEEEEEeccchhHHHHhhcchhHHHHHHhCC
Q 023085 154 WKFRCRKYWLKGER-----K-----GKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYP 222 (287)
Q Consensus 154 ~~~~l~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (287)
..++|++++.++.- + ...+.+.... ..|.++++|+ +|+||++....... +.
T Consensus 167 ~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~-----------~~------ 228 (352)
T 2ism_A 167 LGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGE-----------QG------ 228 (352)
T ss_dssp SSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC----------------------
T ss_pred CceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCC-----------CC------
Confidence 12589999876510 0 1223333211 2489999999 89999999763110 00
Q ss_pred ccccccccCCCceEEEEECCCCcEEEE----------EECCCC--ccccceEEEEEeCCEEEEEecCCCeEEEEeC
Q 023085 223 KLFSQFITLGGGAHLIHVAEDGTIIRN----------LVDPTG--QLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 223 ~~~~~~~~~~~~~~v~~~~~~g~~~~~----------~~~~~~--~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 286 (287)
.....|.++.+.+.+-+. +..|.- .....++++.+.+|+||++...+.+|.++++
T Consensus 229 ---------~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~~~G~l~v~~~~~~~v~~v~~ 295 (352)
T 2ism_A 229 ---------YGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFFRGDLYVAGLRGQALLRLVL 295 (352)
T ss_dssp ----------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEEETTEEEEEETTTTEEEEEEE
T ss_pred ---------CCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEEECCEEEEEECCCCEEEEEEE
Confidence 001235555433311000 000000 0012467777789999999999999999876
No 74
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.44 E-value=3.3e-11 Score=113.75 Aligned_cols=185 Identities=13% Similarity=0.128 Sum_probs=132.8
Q ss_pred CCCCcEEEEeCCCceEEEc-cCC-cEEEeeecCCccccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEE
Q 023085 41 TKEGHLIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLL 117 (287)
Q Consensus 41 d~dg~l~v~~~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~ 117 (287)
++...|+++. .+.|.+++ ..+ .+.+... +..+.+|+++. ++.||++|.. .+.|+
T Consensus 393 ~~~p~Ll~an-~~~Ir~i~l~~~~~~~l~~~-----~~~~~gl~~d~~~~~lY~sD~~-----------------~~~I~ 449 (791)
T 3m0c_C 393 GSIAYLFFTN-RHEVRKMTLDRSEYTSLIPN-----LRNVVALDTEVASNRIYWSDLS-----------------QRMIC 449 (791)
T ss_dssp TSCCEEEEEC-BSSEEEECTTSCCCEEEECS-----CSSEEEEEEETTTTEEEEEETT-----------------TTEEE
T ss_pred cccccccccc-ccceeEeeccCCcceeeecC-----CCceEEEeecccCCeeEEeecc-----------------ceeEE
Confidence 3334566665 45788888 444 5555322 35678999997 6789998643 46788
Q ss_pred EEeCCCC----eeEE-eeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCC-C
Q 023085 118 KYDPSSN----ITTL-VADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPD-G 191 (287)
Q Consensus 118 ~~~~~~~----~~~~-~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~-G 191 (287)
++++... .... +...+..|.||+++..++.|||++...++|.++++++.. ...+.......|.+|++|+. |
T Consensus 450 ~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~---~~~l~~~~l~~P~gIaVDp~~g 526 (791)
T 3m0c_C 450 STQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLFRENGSKPRAIVVDPVHG 526 (791)
T ss_dssp EEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS---EEEEEECTTCCEEEEEEETTTT
T ss_pred EEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe---EEEEEeCCCCCcceEEEecCCC
Confidence 8887632 2222 334678899999999888899999999999999987532 22333223346999999984 8
Q ss_pred CEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEEEEEe--CC
Q 023085 192 TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV--DN 269 (287)
Q Consensus 192 ~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~g 269 (287)
.||++.... ...|.+++.+|.....+... + +..+.+++++ ++
T Consensus 527 ~LYwtD~g~---------------------------------~~~I~~~~~dG~~~~~lv~~-~--l~~P~GLavD~~~~ 570 (791)
T 3m0c_C 527 FMYWTDWGT---------------------------------PAKIKKGGLNGVDIYSLVTE-N--IQWPNGITLDLLSG 570 (791)
T ss_dssp EEEEEECSS---------------------------------SCEEEEEETTSCCEEEEECS-S--CSCEEEEEEETTTT
T ss_pred CEEEecCCC---------------------------------CCeEEEEecCCCceEEEEeC-C--CCCceEEEEecCCC
Confidence 999998751 14899999999877776542 2 4578889887 69
Q ss_pred EEEEEecCCCeEEEEeCC
Q 023085 270 HLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 270 ~l~i~~~~~~~i~~~~~~ 287 (287)
+||++....++|.+++++
T Consensus 571 ~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 571 RLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp EEEEEETTTTEEEEEETT
T ss_pred eEEEEeCCCCcEEEEecC
Confidence 999999999999999875
No 75
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.43 E-value=2.3e-11 Score=99.97 Aligned_cols=193 Identities=14% Similarity=0.131 Sum_probs=131.0
Q ss_pred cccCeEECCCCcEEEEeC---CCceEEEc-cCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeee
Q 023085 34 TLVGLTSTKEGHLIICDN---ANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDIL 108 (287)
Q Consensus 34 ~~~~i~~d~dg~l~v~~~---~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~ 108 (287)
+. |+++++||+||+++. .+.|.++| ++| +..-.... ...++.+++.+ .++||+++.
T Consensus 23 ~~-Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~---~~~fgeGi~~~-g~~lyv~t~-------------- 83 (266)
T 2iwa_A 23 TQ-GLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMD---DSYFGEGLTLL-NEKLYQVVW-------------- 83 (266)
T ss_dssp EE-EEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECC---TTCCEEEEEEE-TTEEEEEET--------------
T ss_pred cc-cEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecC---CCcceEEEEEe-CCEEEEEEe--------------
Confidence 56 999999999999974 25699999 777 33322211 12345567776 458999742
Q ss_pred ccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEecc---CCCCCcce
Q 023085 109 EGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN---LPGAPDNI 185 (287)
Q Consensus 109 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~i 185 (287)
..+.++.+|+++.++..-.... .+.|+.+++|++.+|+++ .++.|..+|.++.+... ...... ....|+.+
T Consensus 84 ---~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~-~I~Vg~~~~p~~~~nel 157 (266)
T 2iwa_A 84 ---LKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIK-KHNVKYNGHRVIRLNEL 157 (266)
T ss_dssp ---TCSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEE-EEECEETTEECCCEEEE
T ss_pred ---cCCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEE-EEEECCCCcccccceeE
Confidence 3578999999887654322212 467777888999999998 67899999976432111 111111 11136677
Q ss_pred eeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCC---------
Q 023085 186 NLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTG--------- 255 (287)
Q Consensus 186 ~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~--------- 255 (287)
.+. +|.||+..+. .+.|.++|++ ++.+..+..+..
T Consensus 158 e~~-dg~lyvn~~~----------------------------------~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~ 202 (266)
T 2iwa_A 158 EYI-NGEVWANIWQ----------------------------------TDCIARISAKDGTLLGWILLPNLRKKLIDEGF 202 (266)
T ss_dssp EEE-TTEEEEEETT----------------------------------SSEEEEEETTTCCEEEEEECHHHHHHHHHTTC
T ss_pred EEE-CCEEEEecCC----------------------------------CCeEEEEECCCCcEEEEEECCCcccccccccc
Confidence 777 7899988875 3589999985 778888775311
Q ss_pred ccccceEEEEEe--CCEEEEEecCCCeEEEEeC
Q 023085 256 QLMSFVTSGLQV--DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 256 ~~~~~~~~~~~~--~g~l~i~~~~~~~i~~~~~ 286 (287)
.....+.++..+ +++||+++...+.|.++++
T Consensus 203 ~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 203 RDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp TTCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred cccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 011345777776 4799999999999999876
No 76
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.43 E-value=2e-10 Score=97.19 Aligned_cols=230 Identities=12% Similarity=0.099 Sum_probs=139.7
Q ss_pred CCCcEEEEe-cCCeEEEEE-C--CceEEEE--eeCCccccCeEECCCCc-EEEEeCC-CceEEEc-c--CC-cEEEeeec
Q 023085 3 KNGVIYTAT-RDGWIKRLQ-D--GTWVNWK--FIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-E--DG-VENFLSYV 70 (287)
Q Consensus 3 ~~G~l~~~~-~~g~i~~~~-~--~~~~~~~--~~~~~~~~~i~~d~dg~-l~v~~~~-~gi~~~~-~--~g-~~~~~~~~ 70 (287)
....+|++. .++.|..|+ + ++..... .....+. .++++++|+ |+++... ..|..++ . ++ .+.+....
T Consensus 3 ~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 81 (343)
T 1ri6_A 3 LKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQ-PMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA 81 (343)
T ss_dssp CEEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCC-CEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE
T ss_pred ceEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCc-eEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccc
Confidence 345688884 688899998 3 5444332 2344566 899999997 7887765 4566655 3 55 55443322
Q ss_pred CCccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe---eEEeeccccccceEEEccCCC
Q 023085 71 NGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI---TTLVADGFYFANGVALSRDED 146 (287)
Q Consensus 71 ~~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~ 146 (287)
. ...|..++++++|. +|++.. ..+.|..++...+. ..........+..++++|+++
T Consensus 82 ~---~~~~~~~~~s~dg~~l~~~~~-----------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 141 (343)
T 1ri6_A 82 L---PGSLTHISTDHQGQFVFVGSY-----------------NAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNR 141 (343)
T ss_dssp C---SSCCSEEEECTTSSEEEEEET-----------------TTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSS
T ss_pred c---CCCCcEEEEcCCCCEEEEEec-----------------CCCeEEEEECCCCccccccccccCCCCceEEEECCCCC
Confidence 1 12678899999997 666532 23456666652232 222233345688899999999
Q ss_pred EEEEEeCCCCEEEEEEecC-CCCccee--EEeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHHhCC
Q 023085 147 YVVVCESWKFRCRKYWLKG-ERKGKLE--TFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYP 222 (287)
Q Consensus 147 ~l~v~~~~~~~l~~~~~~~-~~~~~~~--~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (287)
.+|+++...+.|..|++.. .+..... .........|.+++++++|+ +|++...
T Consensus 142 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~----------------------- 198 (343)
T 1ri6_A 142 TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL----------------------- 198 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-----------------------
T ss_pred EEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC-----------------------
Confidence 9999986778999999864 3322211 22212223578899999997 7777643
Q ss_pred ccccccccCCCceEEEEECCC---CcE--EEEEE-CCCC-ccccceEEEEEe--CCEEEEEecCCCeEEEEeCC
Q 023085 223 KLFSQFITLGGGAHLIHVAED---GTI--IRNLV-DPTG-QLMSFVTSGLQV--DNHLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 223 ~~~~~~~~~~~~~~v~~~~~~---g~~--~~~~~-~~~~-~~~~~~~~~~~~--~g~l~i~~~~~~~i~~~~~~ 287 (287)
.+.+..++.+ +.. ...+. .+.+ .....+..+... +..||++....+.|.+++++
T Consensus 199 -----------~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 199 -----------NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp -----------TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred -----------CCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 1355555542 222 22332 1222 112244556664 35788888778888888763
No 77
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.43 E-value=1.3e-11 Score=104.22 Aligned_cols=191 Identities=13% Similarity=0.123 Sum_probs=128.2
Q ss_pred CccccCeEECCCCcEEEEeCC-CceEEEccCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeec
Q 023085 32 SQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILE 109 (287)
Q Consensus 32 ~~~~~~i~~d~dg~l~v~~~~-~gi~~~~~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~ 109 (287)
..|. +++++++|+||+++.. +.|+++++++ ....... ...|++++++++|++|+++..
T Consensus 32 ~~pe-gia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~-----~~~p~gia~~~dG~l~vad~~-------------- 91 (306)
T 2p4o_A 32 TFLE-NLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATV-----EGKVSGLAFTSNGDLVATGWN-------------- 91 (306)
T ss_dssp CCEE-EEEECTTSCEEEEETTTTEEEEECTTCCEEEEEEC-----SSEEEEEEECTTSCEEEEEEC--------------
T ss_pred CCcc-eEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeC-----CCCceeEEEcCCCcEEEEecc--------------
Confidence 4567 9999999999999854 5699999666 4443322 136889999999999998632
Q ss_pred cCCCceEEEEeCCCCeeEEeec--cccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEE-------e-ccCC
Q 023085 110 GKPHGQLLKYDPSSNITTLVAD--GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETF-------A-ENLP 179 (287)
Q Consensus 110 ~~~~~~v~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~-------~-~~~~ 179 (287)
.....|+++++.+++++.+.. ....+++++..+++ .+|+++...++|++++..... .+.... . ....
T Consensus 92 -~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~-~~v~~~~~~~~~~~~~~~~ 168 (306)
T 2p4o_A 92 -ADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPS-GSIWLEHPMLARSNSESVF 168 (306)
T ss_dssp -TTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTE-EEEEEECGGGSCSSTTCCS
T ss_pred -CCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCc-EeEEEECCccccccccCCC
Confidence 112358899887787765532 34567888876544 689999878899999965321 011000 0 0111
Q ss_pred CCCcceeeCCCC-CEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCC--cE--EEEEECCC
Q 023085 180 GAPDNINLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDG--TI--IRNLVDPT 254 (287)
Q Consensus 180 ~~~~~i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g--~~--~~~~~~~~ 254 (287)
..|+++ +++| .||++... .+.|.+++.++ +. ...+..
T Consensus 169 ~~pngi--s~dg~~lyv~d~~----------------------------------~~~I~~~~~~~~g~~~~~~~~~~-- 210 (306)
T 2p4o_A 169 PAANGL--KRFGNFLYVSNTE----------------------------------KMLLLRIPVDSTDKPGEPEIFVE-- 210 (306)
T ss_dssp CSEEEE--EEETTEEEEEETT----------------------------------TTEEEEEEBCTTSCBCCCEEEEE--
T ss_pred CcCCCc--CcCCCEEEEEeCC----------------------------------CCEEEEEEeCCCCCCCccEEEec--
Confidence 257777 4555 69999876 35788888653 21 122221
Q ss_pred CccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 255 GQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 255 ~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
...+..++.+ +|+||++...+++|.+|+.
T Consensus 211 ---~~~P~gi~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 211 ---QTNIDDFAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp ---SCCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred ---cCCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence 1346777777 7899999999999999874
No 78
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.42 E-value=1.8e-11 Score=105.01 Aligned_cols=212 Identities=12% Similarity=0.147 Sum_probs=133.7
Q ss_pred CceEEEEeeCCccccCeEECCCCcEEEEeCC--C---ceEEEccCC-cEEEeee--cCCccccccceEEEcCCCcEEEEc
Q 023085 22 GTWVNWKFIDSQTLVGLTSTKEGHLIICDNA--N---GLHKVSEDG-VENFLSY--VNGSKLRFANDVVEASDGSLYFTV 93 (287)
Q Consensus 22 ~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~--~---gi~~~~~~g-~~~~~~~--~~~~~~~~~~~l~~d~~g~l~v~~ 93 (287)
++++.+......|. +++++++|++|++... . .|+.++ +| +.++... .....+..|.++++|++|+||++|
T Consensus 7 g~~~~v~~~~~~p~-~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D 84 (343)
T 2qe8_A 7 DRLEVVAELSLAPG-NITLTPDGRLFLSLHQFYQPEMQVAELT-QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLD 84 (343)
T ss_dssp -CCEEEEEESSCEE-EEEECTTSCEEEEECGGGCCSCSEEEEE-TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEE
T ss_pred ceeEEEEEcCCCcc-eEEECCCCCEEEEeCCCCCCceEEEEEC-CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEc
Confidence 34444444445677 9999999999999532 2 478887 67 5544321 111235689999999999999986
Q ss_pred CCCCCCCcceeeeeeccCCCceEEEEeCCCCee-EEeec------cccccceEEEccCCCEEEEEeC---CCCEEEEEEe
Q 023085 94 SSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT-TLVAD------GFYFANGVALSRDEDYVVVCES---WKFRCRKYWL 163 (287)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~------~~~~~~~i~~~~~~~~l~v~~~---~~~~l~~~~~ 163 (287)
... .......|+++|++++++ ..+.. ....+++++++++++.+|+++. ..+.|.+++.
T Consensus 85 ~g~------------~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~ 152 (343)
T 2qe8_A 85 NGN------------QSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDL 152 (343)
T ss_dssp CHH------------HHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEET
T ss_pred CCC------------CcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEEC
Confidence 330 001135799999988874 33321 1235789999988778999998 7789999997
Q ss_pred cCCCCccee-----------EE-ecc--------------CCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHH
Q 023085 164 KGERKGKLE-----------TF-AEN--------------LPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKH 216 (287)
Q Consensus 164 ~~~~~~~~~-----------~~-~~~--------------~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~ 216 (287)
++.+..... .+ ... ....+++|+++++|+ ||++...
T Consensus 153 ~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~----------------- 215 (343)
T 2qe8_A 153 QTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH----------------- 215 (343)
T ss_dssp TTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS-----------------
T ss_pred CCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC-----------------
Confidence 643211100 00 000 012368899999984 8888765
Q ss_pred HHHhCCccccccccCCCceEEEEECCC----CcE--------EEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEE
Q 023085 217 VLAAYPKLFSQFITLGGGAHLIHVAED----GTI--------IRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGK 283 (287)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~v~~~~~~----g~~--------~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~ 283 (287)
...+++++.+ +.. +..+.. ...+.+++.+ +|+||++...+++|.+
T Consensus 216 -----------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~g~pdgia~d~~G~l~va~~~~~~V~~ 273 (343)
T 2qe8_A 216 -----------------STSMYRIKSADLSNLQLTDAELGSKIERYSE-----KPICDGISIDKDHNIYVGDLAHSAIGV 273 (343)
T ss_dssp -----------------CSEEEEEEHHHHTCTTCCHHHHHTTCEEEEE-----CCSCSCEEECTTCCEEEEEGGGTEEEE
T ss_pred -----------------CCeEEEEEHHHhcCCCCChhhhhcceEeccc-----CCCCceEEECCCCCEEEEccCCCeEEE
Confidence 2367776521 110 111110 1135566776 6899999999999999
Q ss_pred EeC
Q 023085 284 VQL 286 (287)
Q Consensus 284 ~~~ 286 (287)
++.
T Consensus 274 ~d~ 276 (343)
T 2qe8_A 274 ITS 276 (343)
T ss_dssp EET
T ss_pred EEC
Confidence 875
No 79
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.42 E-value=1.5e-12 Score=121.89 Aligned_cols=171 Identities=14% Similarity=0.112 Sum_probs=116.7
Q ss_pred CCcEEEEe-cCCeEEEEE-CC-----ceEEEEe-eCCccccCeEECC-CCcEEEEeCC-CceEEEccCC--cEEEeeecC
Q 023085 4 NGVIYTAT-RDGWIKRLQ-DG-----TWVNWKF-IDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--VENFLSYVN 71 (287)
Q Consensus 4 ~G~l~~~~-~~g~i~~~~-~~-----~~~~~~~-~~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~~~g--~~~~~~~~~ 71 (287)
++.||+++ .+++|++++ ++ ....+.. ....|. +|++|+ .++||+++.. +.|.+++.+| .+.+..
T Consensus 417 ~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~-glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~--- 492 (699)
T 1n7d_A 417 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR--- 492 (699)
T ss_dssp TTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC-CEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECC---
T ss_pred cCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc-eEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEe---
Confidence 56899887 567899998 54 1111211 223577 999994 6689999755 5688888666 444422
Q ss_pred CccccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccccccceEEEccCCCEEE
Q 023085 72 GSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYVV 149 (287)
Q Consensus 72 ~~~~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~l~ 149 (287)
..+..|++|++++ .|.||+++.. ..+.|++++++....+.+ ...+..|+||+++++++.||
T Consensus 493 -~~~~~P~giavDp~~g~ly~td~~----------------~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY 555 (699)
T 1n7d_A 493 -EQGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLY 555 (699)
T ss_dssp -CSSCCCCCEECCSSSSCCEECCCS----------------SSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEE
T ss_pred -CCCCCcceEEEccCCCcEEEcccC----------------CCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEE
Confidence 1245789999997 5789997633 125788888763322222 34577899999999888899
Q ss_pred EEeCCCCEEEEEEecCCCCcceeEEec--cCCCCCcceeeCCCCCEEEEEec
Q 023085 150 VCESWKFRCRKYWLKGERKGKLETFAE--NLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 150 v~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
|++...++|.++++++. ..+.+.. .....|.+|++|.+ +||++...
T Consensus 556 ~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~~~P~glavd~~-~lywtd~~ 603 (699)
T 1n7d_A 556 WVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPFSLAVFED-KVFWTDII 603 (699)
T ss_dssp EEETTTTEEEEECSSSS---CCEEECCCSSSCSSCCCCEEETT-EEEEECST
T ss_pred EEecCCCeEEEEccCCC---ceEEEEecCCcCCCceEeEEECC-EEEEEeCC
Confidence 99999999999998752 2233332 12346999999976 68877765
No 80
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.41 E-value=1e-10 Score=100.73 Aligned_cols=161 Identities=8% Similarity=0.008 Sum_probs=100.6
Q ss_pred EEEeeCCccccCeEECCCCcEEEEeCCCceEEEccCCcEEEeeec-CCccccccceEEEcCC----CcEEEEcCCCCCCC
Q 023085 26 NWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVSEDGVENFLSYV-NGSKLRFANDVVEASD----GSLYFTVSSSKYLP 100 (287)
Q Consensus 26 ~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~~~g~~~~~~~~-~~~~~~~~~~l~~d~~----g~l~v~~~~~~~~~ 100 (287)
.+......|. +|++++||+|||++....|++++.+|.+.+.... .......|.+|+++++ |.||+++....
T Consensus 23 ~va~~l~~P~-~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~--- 98 (354)
T 3a9g_A 23 EVASDLEVPW-SIAPLGGGRYLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFA--- 98 (354)
T ss_dssp EEECSCSCEE-EEEEEETTEEEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEEC---
T ss_pred EEeCCCCCCe-EEEEcCCCeEEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccC---
Confidence 3344445788 9999999999999977778888755542222111 1112346889999986 89999742100
Q ss_pred cceeeeeeccCCCceEEEEeCCCC--e---eEEe----e-ccccccceEEEccCCCEEEEEeCC-------------CCE
Q 023085 101 HEYCLDILEGKPHGQLLKYDPSSN--I---TTLV----A-DGFYFANGVALSRDEDYVVVCESW-------------KFR 157 (287)
Q Consensus 101 ~~~~~~~~~~~~~~~v~~~~~~~~--~---~~~~----~-~~~~~~~~i~~~~~~~~l~v~~~~-------------~~~ 157 (287)
........|++++.+.+ . .+.+ . .....+++++++|||. ||++... .++
T Consensus 99 -------~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~ 170 (354)
T 3a9g_A 99 -------EGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGK 170 (354)
T ss_dssp -------GGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSE
T ss_pred -------CCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeE
Confidence 00001146888876543 1 1211 1 1123568899999996 9998531 258
Q ss_pred EEEEEecCCC-----CcceeEEeccCCCCCcceeeCC-CCCEEEEEec
Q 023085 158 CRKYWLKGER-----KGKLETFAENLPGAPDNINLAP-DGTFWIAIIK 199 (287)
Q Consensus 158 l~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~d~-~G~lwv~~~~ 199 (287)
|++++.++.. +...+.+.... -.|.++++|+ +|+||++...
T Consensus 171 I~ri~~dG~~p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g 217 (354)
T 3a9g_A 171 ILRVDEEGRPPADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHG 217 (354)
T ss_dssp EEEECTTSCCCTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEECC
T ss_pred EEEEcCCCCCCCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecC
Confidence 9999876521 00223343222 2489999999 8999999976
No 81
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.38 E-value=3.8e-10 Score=93.80 Aligned_cols=215 Identities=11% Similarity=0.078 Sum_probs=139.1
Q ss_pred CCCCcEEEEecCCeEEEEE-CCceEEEEeeC--CccccCeEECCCCcEEEEeCC--CceEEEccCC--cEEEeeecC-Cc
Q 023085 2 DKNGVIYTATRDGWIKRLQ-DGTWVNWKFID--SQTLVGLTSTKEGHLIICDNA--NGLHKVSEDG--VENFLSYVN-GS 73 (287)
Q Consensus 2 d~~G~l~~~~~~g~i~~~~-~~~~~~~~~~~--~~~~~~i~~d~dg~l~v~~~~--~gi~~~~~~g--~~~~~~~~~-~~ 73 (287)
.++|++++ +.+++|..++ +|+........ .... +....++|++++++.. ..++.++++| +..+..... ..
T Consensus 45 ~pdG~ilv-s~~~~V~~~d~~G~~~W~~~~~~~~~~~-~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~ 122 (276)
T 3no2_A 45 TKAGEILF-SYSKGAKMITRDGRELWNIAAPAGCEMQ-TARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIER 122 (276)
T ss_dssp CTTSCEEE-ECBSEEEEECTTSCEEEEEECCTTCEEE-EEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSS
T ss_pred CCCCCEEE-eCCCCEEEECCCCCEEEEEcCCCCcccc-ccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCc
Confidence 47899999 5677899999 77654433332 1233 6778899999998654 3588888777 444422111 12
Q ss_pred cccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeC
Q 023085 74 KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCES 153 (287)
Q Consensus 74 ~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~ 153 (287)
+...+..+.+.++|++++++. ..+.|..+|++ |++.........|.++...++++ +++++.
T Consensus 123 ~~~~~~~v~~~~~G~~lv~~~-----------------~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~-~~v~~~ 183 (276)
T 3no2_A 123 PHAQFRQINKNKKGNYLVPLF-----------------ATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGD-CLVACG 183 (276)
T ss_dssp GGGSCSCCEECTTSCEEEEET-----------------TTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSC-EEEECB
T ss_pred ccccccCceECCCCCEEEEec-----------------CCCEEEEECCC-CCEEEEEECCCCccceeEcCCCC-EEEEeC
Confidence 234566788899999998743 25689999988 76554433334677888888887 667777
Q ss_pred CCCEEEEEEecCCCCcceeEEec-cCC----CCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCcccccc
Q 023085 154 WKFRCRKYWLKGERKGKLETFAE-NLP----GAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQF 228 (287)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~~-~~~----~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
.+++|..++.++++. ...+.. ..+ ..|.+++..++|+++++...++..
T Consensus 184 ~~~~v~~~d~~tG~~--~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~------------------------- 236 (276)
T 3no2_A 184 DAHCFVQLNLESNRI--VRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDR------------------------- 236 (276)
T ss_dssp TTSEEEEECTTTCCE--EEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCT-------------------------
T ss_pred CCCeEEEEeCcCCcE--EEEecCCCCCCccccccccceEcCCCCEEEEeccCccc-------------------------
Confidence 778899999763321 112211 111 237788899999999999642100
Q ss_pred cc-CCCceEEEEECCCCcEEEEEECCCCccccceEEEEE
Q 023085 229 IT-LGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQ 266 (287)
Q Consensus 229 ~~-~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 266 (287)
.. ....+.++.++++|+.++.|..... +..+++++.
T Consensus 237 ~~~~~~~~~~~~~~~~g~~~W~~~~~~~--~~~~~~~~~ 273 (276)
T 3no2_A 237 EAGKGKHPQLVEIDSEGKVVWQLNDKVK--FGMISTICP 273 (276)
T ss_dssp TGGGSCCCSEEEECTTSBEEEEECCTTT--SCCCCEEEE
T ss_pred cccccCCceEEEECCCCCEEEEecCccc--ccceeeeee
Confidence 00 0013468999999999999975332 455666543
No 82
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.38 E-value=2.6e-09 Score=92.46 Aligned_cols=222 Identities=13% Similarity=0.135 Sum_probs=150.2
Q ss_pred CCCCc-EEEEe-cCCeEEEEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeCC-CceEEEc-cCC-cEEEeeecCCc
Q 023085 2 DKNGV-IYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG-VENFLSYVNGS 73 (287)
Q Consensus 2 d~~G~-l~~~~-~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~-~gi~~~~-~~g-~~~~~~~~~~~ 73 (287)
+++|. |+++. .++.|..|+ +++..........+. .++++++|+ |+++... ..|.+++ .++ .......
T Consensus 40 s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~-~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~---- 114 (391)
T 1l0q_A 40 SPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQ-GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT---- 114 (391)
T ss_dssp CTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEE-EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC----
T ss_pred CCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCcc-ceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC----
Confidence 46775 55554 788999999 566555444444556 899999996 6777644 5688888 666 3332221
Q ss_pred cccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEe
Q 023085 74 KLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCE 152 (287)
Q Consensus 74 ~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~ 152 (287)
...+.+++++++|. +|++. ...+.|+.+|..+++..........+..++++|+++.+|++.
T Consensus 115 -~~~~~~~~~s~dg~~l~~~~-----------------~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 176 (391)
T 1l0q_A 115 -GKSPLGLALSPDGKKLYVTN-----------------NGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVAN 176 (391)
T ss_dssp -SSSEEEEEECTTSSEEEEEE-----------------TTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEE
T ss_pred -CCCcceEEECCCCCEEEEEe-----------------CCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEe
Confidence 13568899999986 66753 235689999988787655544445678899999999999998
Q ss_pred CCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccC
Q 023085 153 SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 231 (287)
Q Consensus 153 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
...+.|..+|+...+ ..... .....+.+++++++|+ ||++...
T Consensus 177 ~~~~~v~~~d~~~~~---~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~-------------------------------- 220 (391)
T 1l0q_A 177 FDSMSISVIDTVTNS---VIDTV-KVEAAPSGIAVNPEGTKAYVTNVD-------------------------------- 220 (391)
T ss_dssp TTTTEEEEEETTTTE---EEEEE-ECSSEEEEEEECTTSSEEEEEEEC--------------------------------
T ss_pred CCCCEEEEEECCCCe---EEEEE-ecCCCccceEECCCCCEEEEEecC--------------------------------
Confidence 888899999975432 11111 1223577889999885 6666641
Q ss_pred CCceEEEEECCC-CcEEEEEECCCCccccceEEEEEe--CCEEEEEecCCCeEEEEeCC
Q 023085 232 GGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 232 ~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~~~~i~~~~~~ 287 (287)
...+.|..++.+ ++.+..+.... .+..+... +..||++....+.|.++|+.
T Consensus 221 ~~~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 221 KYFNTVSMIDTGTNKITARIPVGP-----DPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp SSCCEEEEEETTTTEEEEEEECCS-----SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred cCCCcEEEEECCCCeEEEEEecCC-----CccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 013578888865 55666665422 35556554 45788998888899988863
No 83
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.37 E-value=5.3e-10 Score=94.62 Aligned_cols=226 Identities=12% Similarity=0.116 Sum_probs=134.7
Q ss_pred CCCCc-EEEEecC-CeEEEEE-C---CceEEEEe--eCCccccCeEECCCCc-EEEEeCCCc-eEEEc-cCC-cEEEeee
Q 023085 2 DKNGV-IYTATRD-GWIKRLQ-D---GTWVNWKF--IDSQTLVGLTSTKEGH-LIICDNANG-LHKVS-EDG-VENFLSY 69 (287)
Q Consensus 2 d~~G~-l~~~~~~-g~i~~~~-~---~~~~~~~~--~~~~~~~~i~~d~dg~-l~v~~~~~g-i~~~~-~~g-~~~~~~~ 69 (287)
+++|. ||+++.+ +.|..|+ + ++...... ....+. .++++++|+ ||++....+ |..++ .++ .......
T Consensus 46 spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 124 (343)
T 1ri6_A 46 SPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLT-HISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDV 124 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCS-EEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEE
T ss_pred CCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCc-EEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccc
Confidence 56775 8888765 8888877 3 45443322 233566 899999997 777765444 77777 455 2222222
Q ss_pred cCCccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCC-CeeEEe------eccccccceEEE
Q 023085 70 VNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NITTLV------ADGFYFANGVAL 141 (287)
Q Consensus 70 ~~~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~------~~~~~~~~~i~~ 141 (287)
... ...+.+++++++|. +|+++. ..+.|..++..+ +++... ......+..+++
T Consensus 125 ~~~--~~~~~~~~~s~dg~~l~~~~~-----------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
T 1ri6_A 125 VEG--LDGCHSANISPDNRTLWVPAL-----------------KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVF 185 (343)
T ss_dssp ECC--CTTBCCCEECTTSSEEEEEEG-----------------GGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEE
T ss_pred ccC--CCCceEEEECCCCCEEEEecC-----------------CCCEEEEEEecCCCceeeecccccccCCCCCcceEEE
Confidence 111 23578899999986 666531 245677777655 554321 122346778999
Q ss_pred ccCCCEEEEEeCCCCEEEEEEecC--CCCcceeEEeccC-----CCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchh
Q 023085 142 SRDEDYVVVCESWKFRCRKYWLKG--ERKGKLETFAENL-----PGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKL 213 (287)
Q Consensus 142 ~~~~~~l~v~~~~~~~l~~~~~~~--~~~~~~~~~~~~~-----~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~ 213 (287)
+|+++.+|++....+.+..|+++. ............. ...+..++++++|+ ||++...
T Consensus 186 ~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~-------------- 251 (343)
T 1ri6_A 186 HPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT-------------- 251 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT--------------
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC--------------
Confidence 999999999987788999999853 2221122221111 11344699999995 6666543
Q ss_pred HHHHHHhCCccccccccCCCceEEEEECCC--CcE---EEEEECCCCccccceEEEEEe--CCEEEEEecCCCeEEEEeC
Q 023085 214 IKHVLAAYPKLFSQFITLGGGAHLIHVAED--GTI---IRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--g~~---~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|..++.+ +.. +..+.. +. .+..+..+ +..||+++...+.|.++++
T Consensus 252 --------------------~~~i~v~d~~~~~~~~~~~~~~~~--~~---~~~~~~~s~dg~~l~~~~~~~~~v~v~~~ 306 (343)
T 1ri6_A 252 --------------------ASLITVFSVSEDGSVLSKEGFQPT--ET---QPRGFNVDHSGKYLIAAGQKSHHISVYEI 306 (343)
T ss_dssp --------------------TTEEEEEEECTTSCCEEEEEEEEC--SS---SCCCEEECTTSSEEEEECTTTCEEEEEEE
T ss_pred --------------------CCEEEEEEEcCCCCceEEeeeecC--CC---ccceEEECCCCCEEEEecCCCCeEEEEEE
Confidence 1345555433 332 222332 11 24555554 4568888877788888754
No 84
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.37 E-value=9.2e-10 Score=94.95 Aligned_cols=237 Identities=14% Similarity=0.074 Sum_probs=134.8
Q ss_pred CCCCc-EEEEecCCeEEEEE---CCceEEEEee--CCccccCeEECCCCc-EEE--Ee-------------CCCceEEEc
Q 023085 2 DKNGV-IYTATRDGWIKRLQ---DGTWVNWKFI--DSQTLVGLTSTKEGH-LII--CD-------------NANGLHKVS 59 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~---~~~~~~~~~~--~~~~~~~i~~d~dg~-l~v--~~-------------~~~gi~~~~ 59 (287)
+++|. ||+++.+ .|..|+ +++....... .+.|. .+++++||+ |++ ++ ....+..++
T Consensus 48 spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~-~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~ 125 (365)
T 1jof_A 48 DHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPR-ANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFS 125 (365)
T ss_dssp CTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGG-GGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEE
T ss_pred CCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCc-cEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEc
Confidence 57785 7777766 788777 4655433221 23466 789999998 344 32 223344444
Q ss_pred --cCC-cEEEeeecCCccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCC-CCeeEEeec---
Q 023085 60 --EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SNITTLVAD--- 131 (287)
Q Consensus 60 --~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~--- 131 (287)
.+| ...............+.+++++++|+ +|+++.+ ...|+.++.+ ++++..+..
T Consensus 126 ~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~-----------------~~~v~~~~~~~~g~~~~~~~~~~ 188 (365)
T 1jof_A 126 VSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT-----------------ANKLWTHRKLASGEVELVGSVDA 188 (365)
T ss_dssp ECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEEECTTSCEEEEEEEEC
T ss_pred cCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC-----------------CCEEEEEEECCCCCEEEeeeEec
Confidence 356 43221211001124678999999996 6665422 3467777665 566543211
Q ss_pred --cccccceEEEccCCCEEEEEeCCCCEEEEEEecC--CCCcc-eeEEeccC---CC---------CCccee-eCCCCC-
Q 023085 132 --GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG--ERKGK-LETFAENL---PG---------APDNIN-LAPDGT- 192 (287)
Q Consensus 132 --~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~--~~~~~-~~~~~~~~---~~---------~~~~i~-~d~~G~- 192 (287)
....|..++++|+|+.+|+++...+.+..|+.+. ++... ...+.... .+ .+.+++ +++||+
T Consensus 189 ~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~ 268 (365)
T 1jof_A 189 PDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKY 268 (365)
T ss_dssp SSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSE
T ss_pred CCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCE
Confidence 1356888999999999999988778888887652 22110 11111111 11 367899 999996
Q ss_pred EEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEE---EECCCCccccceEEEEE---
Q 023085 193 FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRN---LVDPTGQLMSFVTSGLQ--- 266 (287)
Q Consensus 193 lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~--- 266 (287)
||++...... ..+..-.++.++++|+.... ....... .....+.+
T Consensus 269 l~v~~~~~~~---------------------------~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~--~~~~a~sp~~~ 319 (365)
T 1jof_A 269 MFASSRANKF---------------------------ELQGYIAGFKLRDCGSIEKQLFLSPTPTSG--GHSNAVSPCPW 319 (365)
T ss_dssp EEEEEEESST---------------------------TSCCEEEEEEECTTSCEEEEEEEEECSSCC--TTCCCEEECTT
T ss_pred EEEECCCCCC---------------------------CCCCeEEEEEECCCCCEEEeeeeeecCCCC--cccceecCCCc
Confidence 7776654100 00001234555555664432 2221111 11234455
Q ss_pred eCCEEEEEecCCCeEEEEeC
Q 023085 267 VDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 267 ~~g~l~i~~~~~~~i~~~~~ 286 (287)
+++.||+++..++.|.++++
T Consensus 320 dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 320 SDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp CTTEEEEECSSSCEEEEEEE
T ss_pred CCCEEEEEEcCCCeEEEEEE
Confidence 57889999988888888875
No 85
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.36 E-value=8.7e-11 Score=101.19 Aligned_cols=244 Identities=14% Similarity=0.122 Sum_probs=142.8
Q ss_pred CCCCCc-EEEEecCCeEEEEE-CCceEE-EEe-------eCCccccCeEECC----CCcEEEEeCC--------CceEEE
Q 023085 1 MDKNGV-IYTATRDGWIKRLQ-DGTWVN-WKF-------IDSQTLVGLTSTK----EGHLIICDNA--------NGLHKV 58 (287)
Q Consensus 1 ~d~~G~-l~~~~~~g~i~~~~-~~~~~~-~~~-------~~~~~~~~i~~d~----dg~l~v~~~~--------~gi~~~ 58 (287)
++++|+ ||++...|+|++++ ++.... +.. ....+. +|++++ ++.||++... ..|.++
T Consensus 25 ~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~-gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~ 103 (353)
T 2g8s_A 25 FLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLL-DVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYG 103 (353)
T ss_dssp ECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEE-EEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEE
T ss_pred EcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCce-eEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEE
Confidence 468899 99999999999998 655421 111 112346 899998 5899999532 257777
Q ss_pred c-cC--C-cEE---EeeecCC--ccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCC-----
Q 023085 59 S-ED--G-VEN---FLSYVNG--SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN----- 124 (287)
Q Consensus 59 ~-~~--g-~~~---~~~~~~~--~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----- 124 (287)
+ .. + +.. +...... ...+.+..|+++++|.||++....-...... ......+.|+|++++..
T Consensus 104 ~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q----~~~~~~g~I~ri~~dG~~p~~n 179 (353)
T 2g8s_A 104 RLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQ----DLDKLQGKLVRLTDQGEIPDDN 179 (353)
T ss_dssp EECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGG----CTTSCTTEEEEEETTSCCCTTC
T ss_pred EECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccC----CCCCCCeEEEEECCCCCCCCCC
Confidence 6 32 2 222 2111111 1234578999999999999853310000000 00123468999998732
Q ss_pred --------eeEEeeccccccceEEEccCCCEEEEEeCCCC---EEEEEEecCCCCc---------------------cee
Q 023085 125 --------ITTLVADGFYFANGVALSRDEDYVVVCESWKF---RCRKYWLKGERKG---------------------KLE 172 (287)
Q Consensus 125 --------~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~---~l~~~~~~~~~~~---------------------~~~ 172 (287)
..+.+...+..|.+++++++...||+++...+ .|.++.. +...+ ...
T Consensus 180 pf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~-G~nyGwp~~~~~~~~~~~~~~~~~~~~~~ 258 (353)
T 2g8s_A 180 PFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQK-GKNYGWPLATWGINYSGFKIPEAKGEIVA 258 (353)
T ss_dssp TTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCT-TCBCCTTTBCSSBCTTSSCCTTCCBSSCT
T ss_pred CCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEecc-CCcCCCCCccCCCCCCCCccCcccCCCCC
Confidence 23344556778999999995556999987542 4444321 11100 000
Q ss_pred EEec-----cCCCCCcceeeCC-------CCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEE
Q 023085 173 TFAE-----NLPGAPDNINLAP-------DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHV 240 (287)
Q Consensus 173 ~~~~-----~~~~~~~~i~~d~-------~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 240 (287)
.+.. .....|.++++.+ +|++|++... .+.|.++
T Consensus 259 ~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~----------------------------------~~~v~~~ 304 (353)
T 2g8s_A 259 GTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALK----------------------------------DKDVIVM 304 (353)
T ss_dssp TSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETT----------------------------------TTEEEEE
T ss_pred CccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEcc----------------------------------CCEEEEE
Confidence 0000 0112467788753 5889999876 3578888
Q ss_pred CCCC-cEEEEEECCCCccccceEEEEEe-CCEEEEEec-CCCeEEEEe
Q 023085 241 AEDG-TIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISL-TSNFIGKVQ 285 (287)
Q Consensus 241 ~~~g-~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~-~~~~i~~~~ 285 (287)
+.++ +.......-.+ ....+..+.++ +|.|||++- ..++|.++.
T Consensus 305 ~~~~~~~~~~~~~~~~-~~~rp~~v~~~pdG~lyv~td~~~g~I~ri~ 351 (353)
T 2g8s_A 305 SVNGDKVTEDGRILTD-RGQRIRDVRTGPDGYLYVLTDESSGELLKVS 351 (353)
T ss_dssp EEETTEEEEEEEESGG-GCCCEEEEEECTTSCEEEEECSTTEEEEEEE
T ss_pred EeCCCeEeeeEEcccC-CCCceeEEEECCCCcEEEEEeCCCCEEEEEe
Confidence 7654 33222111111 12367888886 799999854 678898875
No 86
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.35 E-value=7.7e-10 Score=94.36 Aligned_cols=209 Identities=9% Similarity=0.052 Sum_probs=131.2
Q ss_pred EEEEeeCCccccCeEECCCCcEEEEeC-CCceEEEc-cCC-cEEEeeec--CCccccccceEEEcC----CCcEEEEcCC
Q 023085 25 VNWKFIDSQTLVGLTSTKEGHLIICDN-ANGLHKVS-EDG-VENFLSYV--NGSKLRFANDVVEAS----DGSLYFTVSS 95 (287)
Q Consensus 25 ~~~~~~~~~~~~~i~~d~dg~l~v~~~-~~gi~~~~-~~g-~~~~~~~~--~~~~~~~~~~l~~d~----~g~l~v~~~~ 95 (287)
+.+......|+ +|++.+||+|||++. ...|++++ .+| .+.+.... .......+.+|++++ ++.||++.+.
T Consensus 25 ~~va~gL~~P~-~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~ 103 (347)
T 3das_A 25 RTVATGLNSPW-GLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS 103 (347)
T ss_dssp EEEECCCSSEE-EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC
T ss_pred EEeecCCCCce-EEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec
Confidence 34444456788 999999999999997 45688898 456 55443221 112245678999997 4889996321
Q ss_pred CCCCCcceeeeeeccCCCceEEEEeCCCC--------eeEEeec-----cccccceEEEccCCCEEEEEeC---------
Q 023085 96 SKYLPHEYCLDILEGKPHGQLLKYDPSSN--------ITTLVAD-----GFYFANGVALSRDEDYVVVCES--------- 153 (287)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~~~~~~~-----~~~~~~~i~~~~~~~~l~v~~~--------- 153 (287)
...+.|.|+....+ +.+.+.. .......|+|+|||. ||++.-
T Consensus 104 ---------------~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~q 167 (347)
T 3das_A 104 ---------------ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQ 167 (347)
T ss_dssp ---------------SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTT
T ss_pred ---------------CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCcccc
Confidence 12357888865431 1122211 122345699999996 999842
Q ss_pred ----CCCEEEEEEecCCC-----CcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCcc
Q 023085 154 ----WKFRCRKYWLKGER-----KGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 224 (287)
Q Consensus 154 ----~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (287)
..++|++++.++.. +...+.+.... -.|.++++|++|.||++.....
T Consensus 168 d~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~----------------------- 223 (347)
T 3das_A 168 DRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQD----------------------- 223 (347)
T ss_dssp CTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCC-SBCCEEEECTTCCEEEEECCSS-----------------------
T ss_pred CCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCC-CCcceEEECCCCCEEEEecCCC-----------------------
Confidence 34789999976521 11223443222 2489999999999999998621
Q ss_pred ccccccCCCceEEEEECCCCcE-----------------EEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEeC
Q 023085 225 FSQFITLGGGAHLIHVAEDGTI-----------------IRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 225 ~~~~~~~~~~~~v~~~~~~g~~-----------------~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 286 (287)
....|.++.+.+.+ +..+.. . ...++++.+.+|.+|++.+.+.+|.++.+
T Consensus 224 --------~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~-~---~~ap~G~~~~~g~~~~~~l~~~~l~~v~~ 290 (347)
T 3das_A 224 --------TWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWST-D---EASPSGIAYAEGSVWMAGLRGERLWRIPL 290 (347)
T ss_dssp --------SCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECT-T---TCCEEEEEEETTEEEEEESTTCSEEEEEE
T ss_pred --------CCceeeEEcCCCEecCCcccCCCCCccccCCcEecCC-C---CCCCcceEEEcCceeeccccCCEEEEEEe
Confidence 11244444332221 111110 0 02567888889999999999999999876
No 87
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.35 E-value=2.7e-09 Score=92.05 Aligned_cols=186 Identities=11% Similarity=0.044 Sum_probs=107.3
Q ss_pred CcEEEEecC--CeEEEEE----CCceEEEEee--C--CccccCeEECCCCc-EEEEeCCCceEEEc-c-CC-cEEEeeec
Q 023085 5 GVIYTATRD--GWIKRLQ----DGTWVNWKFI--D--SQTLVGLTSTKEGH-LIICDNANGLHKVS-E-DG-VENFLSYV 70 (287)
Q Consensus 5 G~l~~~~~~--g~i~~~~----~~~~~~~~~~--~--~~~~~~i~~d~dg~-l~v~~~~~gi~~~~-~-~g-~~~~~~~~ 70 (287)
..||+|+.. ++|+.+. +++.+..... . ..|. .+++++||+ ||+++.. .+..++ . +| ...+....
T Consensus 3 ~~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~-~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~ 80 (365)
T 1jof_A 3 HHLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPIS-WMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHP 80 (365)
T ss_dssp EEEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCS-EEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCc-EEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEee
Confidence 358999854 5787765 4666554332 1 2566 899999997 7777765 787787 4 77 54432211
Q ss_pred CCccccccceEEEcCCCc-EEEEcCC-CCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-ee----ccccccceEEEcc
Q 023085 71 NGSKLRFANDVVEASDGS-LYFTVSS-SKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VA----DGFYFANGVALSR 143 (287)
Q Consensus 71 ~~~~~~~~~~l~~d~~g~-l~v~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~----~~~~~~~~i~~~~ 143 (287)
.. ..|..++++++|+ +|+.... +++ ..+..+.........+|.++.+ +++.. +. .....+++++++|
T Consensus 81 ~~---g~~~~~~~spdg~~l~~~~~~~~~~--~~~~~~~~~~~g~v~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~sp 154 (365)
T 1jof_A 81 IG---GHPRANDADTNTRAIFLLAAKQPPY--AVYANPFYKFAGYGNVFSVSET-GKLEKNVQNYEYQENTGIHGMVFDP 154 (365)
T ss_dssp CC---SSGGGGCTTSCCEEEEEEECSSTTC--CEEEEEESSSCCEEEEEEECTT-CCEEEEEEEEECCTTCCEEEEEECT
T ss_pred cC---CCCccEEECCCCCEEEEEEecCCcc--eeccceeecCCceEEEEccCCC-CcCcceEeeEEeCCCCcceEEEECC
Confidence 11 1366788999998 3432110 000 0000000000112235555433 44432 21 1345688999999
Q ss_pred CCCEEEEEeCCCCEEEEEEec-CCCCcceeEEeccC-CCCCcceeeCCCCC-EEEEEe
Q 023085 144 DEDYVVVCESWKFRCRKYWLK-GERKGKLETFAENL-PGAPDNINLAPDGT-FWIAII 198 (287)
Q Consensus 144 ~~~~l~v~~~~~~~l~~~~~~-~~~~~~~~~~~~~~-~~~~~~i~~d~~G~-lwv~~~ 198 (287)
||+.+|+++...+.|+.|+++ +++......+.... ...|.+++++++|+ ||++..
T Consensus 155 dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 212 (365)
T 1jof_A 155 TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME 212 (365)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET
T ss_pred CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC
Confidence 999999998877899999986 33322111121111 34588999999995 677764
No 88
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.33 E-value=8.7e-10 Score=94.02 Aligned_cols=241 Identities=15% Similarity=0.234 Sum_probs=142.5
Q ss_pred CCCCCcEEEEec-CCeEEEEE--CCceEEEEee-------CCccccCeEECCC----CcEEEEe---CCCceEEEc-cC-
Q 023085 1 MDKNGVIYTATR-DGWIKRLQ--DGTWVNWKFI-------DSQTLVGLTSTKE----GHLIICD---NANGLHKVS-ED- 61 (287)
Q Consensus 1 ~d~~G~l~~~~~-~g~i~~~~--~~~~~~~~~~-------~~~~~~~i~~d~d----g~l~v~~---~~~gi~~~~-~~- 61 (287)
+.++|+||++.. .|+|++++ ++..+.+... ...+. +|+++|+ +.||++- ....|.++. ..
T Consensus 39 ~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~Gll-Gia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~ 117 (347)
T 3das_A 39 PLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLL-GIALSPDYASDHMVYAYFTSASDNRIVRMLYDEK 117 (347)
T ss_dssp ECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEE-EEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTT
T ss_pred EcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCce-eeEeccccccCCEEEEEEecCCCCEEEEEEeCCC
Confidence 357899999997 89999998 4555444322 22356 8999984 8899973 124688886 33
Q ss_pred ----C----cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCC--------e
Q 023085 62 ----G----VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN--------I 125 (287)
Q Consensus 62 ----g----~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~ 125 (287)
. .+.+.........+....|+++++|.|||+....-..... . ......+.|+|++++.. .
T Consensus 118 ~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~---q-d~~~~~G~IlRi~~dG~ip~~nPf~~ 193 (347)
T 3das_A 118 KPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLS---Q-DRKSLGGKILRMTPDGEPAPGNPFPG 193 (347)
T ss_dssp SCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGT---T-CTTCSTTCEEEECTTSSBCTTCSSTT
T ss_pred CcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccc---c-CCCCCCCEEEEEeCCCCccCCCCCCC
Confidence 1 2333222222234566789999999999984221000000 0 00123578999998732 1
Q ss_pred eEEeeccccccceEEEccCCCEEEEEeCCCC---EEEEEEecCCCCcce------------eEEeccCC--CCCcceeeC
Q 023085 126 TTLVADGFYFANGVALSRDEDYVVVCESWKF---RCRKYWLKGERKGKL------------ETFAENLP--GAPDNINLA 188 (287)
Q Consensus 126 ~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~---~l~~~~~~~~~~~~~------------~~~~~~~~--~~~~~i~~d 188 (287)
.+.+...+..|.+++++|+|+ ||+++...+ .|.++. .+...+-. .....-.+ ..|.|+++.
T Consensus 194 ~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~~~~deln~i~-~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~ 271 (347)
T 3das_A 194 SPVYSYGHRNVQGLAWDDKQR-LFASEFGQDTWDELNAIK-PGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA 271 (347)
T ss_dssp CCEEEBCCSBCCEEEECTTCC-EEEEECCSSSCEEEEEEC-TTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE
T ss_pred CeEEeeCCCCcceEEECCCCC-EEEEecCCCCCceeeEEc-CCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEE
Confidence 234566778899999999876 999996543 344443 22111000 00000011 257788887
Q ss_pred CCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcE----EEEEECCCCccccceEEE
Q 023085 189 PDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTI----IRNLVDPTGQLMSFVTSG 264 (287)
Q Consensus 189 ~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~----~~~~~~~~~~~~~~~~~~ 264 (287)
+|.+|++... ...|.++..++.. .+.+-. + ....+..+
T Consensus 272 -~g~~~~~~l~----------------------------------~~~l~~v~~~~~~~~~~~e~~l~--~-~~gR~~dv 313 (347)
T 3das_A 272 -EGSVWMAGLR----------------------------------GERLWRIPLKGTAAAADPQAFLE--G-EYGRLRTV 313 (347)
T ss_dssp -TTEEEEEEST----------------------------------TCSEEEEEEETTEESSCCEEEST--T-TSSCEEEE
T ss_pred -cCceeecccc----------------------------------CCEEEEEEecCCceecceEEeec--C-CCCCccEE
Confidence 5889999876 2356666543321 122211 1 12357888
Q ss_pred EEe-CCEEEEEecCC----------CeEEEEeC
Q 023085 265 LQV-DNHLYVISLTS----------NFIGKVQL 286 (287)
Q Consensus 265 ~~~-~g~l~i~~~~~----------~~i~~~~~ 286 (287)
.+. +|.|||++-+. ++|.++.+
T Consensus 314 ~~~pDG~lyv~td~~~g~g~p~~~ddri~r~~~ 346 (347)
T 3das_A 314 APAGGDKLWLVTSNTDGRGDAKGGDDRILELEV 346 (347)
T ss_dssp EEEETTEEEEEECTTSSSSCCCTTCSCEEEEEE
T ss_pred EECCCCcEEEEEcCCCCCCCCCCCCCEEEEEeC
Confidence 876 89999998643 37887754
No 89
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.33 E-value=3.5e-09 Score=96.38 Aligned_cols=230 Identities=7% Similarity=-0.074 Sum_probs=145.8
Q ss_pred CCCCCcEEEEe-cCCeEEEEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeCCCceEEEcc--CCcEEEeeecCCcc
Q 023085 1 MDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVSE--DGVENFLSYVNGSK 74 (287)
Q Consensus 1 ~d~~G~l~~~~-~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~~gi~~~~~--~g~~~~~~~~~~~~ 74 (287)
++++|.+|++. .++.|..++ +++..........+. ++++++||+ ||+++....|..+|. ...+.+.....
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~-~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~--- 220 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVH-ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI--- 220 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEE-EEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC---
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccc-eEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec---
Confidence 35678888776 567899999 565544433333456 899999995 788876666888884 22222222111
Q ss_pred ccccceEEEcC----CCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeecc------------ccccc
Q 023085 75 LRFANDVVEAS----DGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG------------FYFAN 137 (287)
Q Consensus 75 ~~~~~~l~~d~----~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~------------~~~~~ 137 (287)
...|..+++++ +|. +|+++. ..+.|..+|..+++....... ...+.
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~-----------------~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~ 283 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAY-----------------WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVA 283 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEE-----------------ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEE
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEc-----------------cCCeEEEEeccccccceeecccCcccCccccccCCceE
Confidence 23578899999 885 666531 245678888877764432211 11356
Q ss_pred eEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHH
Q 023085 138 GVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKH 216 (287)
Q Consensus 138 ~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~ 216 (287)
+++++++++.+|++....+.|+.++....+....... .....|.+++++++|+ ++++...
T Consensus 284 ~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i--~~~~~~~~~~~spdg~~l~va~~~----------------- 344 (543)
T 1nir_A 284 AIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI--GAAPFLHDGGWDSSHRYFMTAANN----------------- 344 (543)
T ss_dssp EEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE--ECCSSCCCEEECTTSCEEEEEEGG-----------------
T ss_pred EEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe--ccCcCccCceECCCCCEEEEEecC-----------------
Confidence 7889999998999998889999999865332221122 1234688999999998 5555543
Q ss_pred HHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCCccccceEEEEE-eCCEEEEEec-CCCeEEEEeCC
Q 023085 217 VLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQ-VDNHLYVISL-TSNFIGKVQLS 287 (287)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~i~~~-~~~~i~~~~~~ 287 (287)
.+.|..+|.+ ++.+..+.............+.. +++.+|+++. ..+.|.+++++
T Consensus 345 -----------------~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~ 401 (543)
T 1nir_A 345 -----------------SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTD 401 (543)
T ss_dssp -----------------GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECC
T ss_pred -----------------CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeC
Confidence 2477788865 66666665421100111222322 3488999875 55799998864
No 90
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.33 E-value=4.7e-09 Score=90.76 Aligned_cols=216 Identities=16% Similarity=0.177 Sum_probs=142.6
Q ss_pred CcEEEEe-cCCeEEEEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeC-CCceEEEc-cCC-cEEEeeecCCccccc
Q 023085 5 GVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDN-ANGLHKVS-EDG-VENFLSYVNGSKLRF 77 (287)
Q Consensus 5 G~l~~~~-~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~-~~gi~~~~-~~g-~~~~~~~~~~~~~~~ 77 (287)
+.++++. .++.|..|+ +++..........+. +++++++|+ |+++.. .+.|..++ .++ ....... ...
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~-----~~~ 75 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVGSNPM-GAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA-----GSS 75 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSSSEE-EEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC-----SSS
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecCCCcc-eEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEEC-----CCC
Confidence 3455554 678999999 555544444444566 899999996 556653 35688888 666 3332221 126
Q ss_pred cceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCCC
Q 023085 78 ANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKF 156 (287)
Q Consensus 78 ~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~ 156 (287)
+.+++++++|. |+++. ...+.|..+|..+++..........+..++++|+++.+|++....+
T Consensus 76 v~~~~~spdg~~l~~~~-----------------~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 138 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTN-----------------MASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDK 138 (391)
T ss_dssp EEEEEECTTSSEEEEEE-----------------TTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTT
T ss_pred ccceEECCCCCEEEEEE-----------------CCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCC
Confidence 78899999986 66653 2246899999988876555444456788999999999999988888
Q ss_pred EEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCce
Q 023085 157 RCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGA 235 (287)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
.|..+|+...+. ...+ .....+..++++++|+ ||++... .+
T Consensus 139 ~v~~~d~~~~~~--~~~~--~~~~~~~~~~~~~dg~~l~~~~~~----------------------------------~~ 180 (391)
T 1l0q_A 139 TVSVINTVTKAV--INTV--SVGRSPKGIAVTPDGTKVYVANFD----------------------------------SM 180 (391)
T ss_dssp EEEEEETTTTEE--EEEE--ECCSSEEEEEECTTSSEEEEEETT----------------------------------TT
T ss_pred EEEEEECCCCcE--EEEE--ecCCCcceEEECCCCCEEEEEeCC----------------------------------CC
Confidence 999999754321 1112 1223577899999985 6666554 24
Q ss_pred EEEEECCC-CcEEEEEECCCCccccceEEEEEe--CCEEEEEec--CCCeEEEEeC
Q 023085 236 HLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISL--TSNFIGKVQL 286 (287)
Q Consensus 236 ~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~--~~~~i~~~~~ 286 (287)
.|..+|.+ ++....+... ..+..+... +..||+++. ..+.|.++|+
T Consensus 181 ~v~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 181 SISVIDTVTNSVIDTVKVE-----AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp EEEEEETTTTEEEEEEECS-----SEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred EEEEEECCCCeEEEEEecC-----CCccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 77888865 4444444432 134555554 457888876 5677887775
No 91
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.33 E-value=1.8e-09 Score=92.60 Aligned_cols=230 Identities=15% Similarity=0.202 Sum_probs=133.9
Q ss_pred CCCCc-EEEEecC----CeEEEEE---C-CceEEEEee---CCccccCeEECCCC-cEEEEeCCC-ceEEEc-c-CC-cE
Q 023085 2 DKNGV-IYTATRD----GWIKRLQ---D-GTWVNWKFI---DSQTLVGLTSTKEG-HLIICDNAN-GLHKVS-E-DG-VE 64 (287)
Q Consensus 2 d~~G~-l~~~~~~----g~i~~~~---~-~~~~~~~~~---~~~~~~~i~~d~dg-~l~v~~~~~-gi~~~~-~-~g-~~ 64 (287)
+++|. ||+++.+ +.|..|+ + ++.+..... ...|. .+++ +| .||++.... .+..++ . ++ +.
T Consensus 58 spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~-~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~ 134 (361)
T 3scy_A 58 SADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPC-YLTT--NGKNIVTANYSGGSITVFPIGQDGALL 134 (361)
T ss_dssp CTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEE-EEEE--CSSEEEEEETTTTEEEEEEBCTTSCBC
T ss_pred CCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcE-EEEE--CCCEEEEEECCCCEEEEEEeCCCCcCc
Confidence 57785 8887764 6776665 2 666554332 33555 6777 56 578887553 466666 3 44 32
Q ss_pred EEee--ecCC-------ccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCce--EEEEeCCCC----e-eE
Q 023085 65 NFLS--YVNG-------SKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQ--LLKYDPSSN----I-TT 127 (287)
Q Consensus 65 ~~~~--~~~~-------~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~----~-~~ 127 (287)
.+.. ...+ .....+++++++++|+ +|+++.. .+. +|.++..++ + +.
T Consensus 135 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-----------------~~~v~v~~~~~~~~~~~~~~l~ 197 (361)
T 3scy_A 135 PASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG-----------------TDQIHKFNINPNANADNKEKFL 197 (361)
T ss_dssp SCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEEECTTCCTTTCCCCE
T ss_pred ccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC-----------------CCEEEEEEEcCCCCccccccee
Confidence 2211 0011 1123457899999997 7786432 234 445555443 2 21
Q ss_pred -------EeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccC--CCCCcceeeCCCCC-EEEEE
Q 023085 128 -------LVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENL--PGAPDNINLAPDGT-FWIAI 197 (287)
Q Consensus 128 -------~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~d~~G~-lwv~~ 197 (287)
........|..++|+|+|+.+|+++...+.|..|++++.+........... ...|.+++++++|+ ||++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~ 277 (361)
T 3scy_A 198 TKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASN 277 (361)
T ss_dssp EEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEE
T ss_pred ecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEEC
Confidence 112334567889999999999999987889999998743322222221111 12356899999997 55655
Q ss_pred eccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcE--EEEEECCCCccccceEEEEEe--CCEEE
Q 023085 198 IKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTI--IRNLVDPTGQLMSFVTSGLQV--DNHLY 272 (287)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~--~~~~~~~~~~~~~~~~~~~~~--~g~l~ 272 (287)
... .....++.++++ ++. +..+.. + ..+..+..+ +..||
T Consensus 278 ~~~-------------------------------~~~i~v~~~~~~~g~~~~~~~~~~--g---~~~~~~~~spdg~~l~ 321 (361)
T 3scy_A 278 RLK-------------------------------ADGVAIFKVDETNGTLTKVGYQLT--G---IHPRNFIITPNGKYLL 321 (361)
T ss_dssp CSS-------------------------------SCEEEEEEECTTTCCEEEEEEEEC--S---SCCCEEEECTTSCEEE
T ss_pred CCC-------------------------------CCEEEEEEEcCCCCcEEEeeEecC--C---CCCceEEECCCCCEEE
Confidence 430 112356666643 442 333332 2 235566664 45699
Q ss_pred EEecCCCeEEEEeCC
Q 023085 273 VISLTSNFIGKVQLS 287 (287)
Q Consensus 273 i~~~~~~~i~~~~~~ 287 (287)
+++..++.|.+|.++
T Consensus 322 ~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 322 VACRDTNVIQIFERD 336 (361)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEEE
Confidence 999888888886543
No 92
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.33 E-value=1.5e-10 Score=98.48 Aligned_cols=168 Identities=12% Similarity=0.123 Sum_probs=114.1
Q ss_pred CCCCcEEEEecCCeEEEEE--CCceEEEEeeC-----CccccCeEECCCCcEEEEeCC-------CceEEEccCC-cEEE
Q 023085 2 DKNGVIYTATRDGWIKRLQ--DGTWVNWKFID-----SQTLVGLTSTKEGHLIICDNA-------NGLHKVSEDG-VENF 66 (287)
Q Consensus 2 d~~G~l~~~~~~g~i~~~~--~~~~~~~~~~~-----~~~~~~i~~d~dg~l~v~~~~-------~gi~~~~~~g-~~~~ 66 (287)
+++|.+|+++. .+|++++ +++++.+.... ..+. ++++|++|++|+++.. .+|++++ ++ .+.+
T Consensus 98 ~~dg~l~v~~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~~ 174 (326)
T 2ghs_A 98 ISDSKQLIASD-DGLFLRDTATGVLTLHAELESDLPGNRSN-DGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVTKL 174 (326)
T ss_dssp EETTEEEEEET-TEEEEEETTTCCEEEEECSSTTCTTEEEE-EEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEEEE
T ss_pred eCCCeEEEEEC-CCEEEEECCCCcEEEEeeCCCCCCCCCCC-CEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEEEe
Confidence 46899999984 4699999 67766554322 2345 8899999999999742 4699998 77 6554
Q ss_pred eeecCCccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCC--CC-ee---EEee---cccccc
Q 023085 67 LSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS--SN-IT---TLVA---DGFYFA 136 (287)
Q Consensus 67 ~~~~~~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~~---~~~~---~~~~~~ 136 (287)
... ...+++++++++|. +|+++.. .+.|++++.+ ++ ++ ..+. .....|
T Consensus 175 ~~~-----~~~~~~i~~s~dg~~lyv~~~~-----------------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p 232 (326)
T 2ghs_A 175 FAD-----ISIPNSICFSPDGTTGYFVDTK-----------------VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGM 232 (326)
T ss_dssp EEE-----ESSEEEEEECTTSCEEEEEETT-----------------TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEE
T ss_pred eCC-----CcccCCeEEcCCCCEEEEEECC-----------------CCEEEEEEcccccCCcccCceEEEECCCCCCCC
Confidence 322 23578899999985 8886432 4578888864 45 32 1111 123467
Q ss_pred ceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeC-CCC-CEEEEEec
Q 023085 137 NGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLA-PDG-TFWIAIIK 199 (287)
Q Consensus 137 ~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d-~~G-~lwv~~~~ 199 (287)
.+++++++|+ +|++...+++|.+|+.++. ....+. .....|.+++++ +++ .||+++..
T Consensus 233 ~gi~~d~~G~-lwva~~~~~~v~~~d~~g~---~~~~i~-~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 233 DGSVCDAEGH-IWNARWGEGAVDRYDTDGN---HIARYE-VPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp EEEEECTTSC-EEEEEETTTEEEEECTTCC---EEEEEE-CSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CeeEECCCCC-EEEEEeCCCEEEEECCCCC---EEEEEE-CCCCCcEEEEEecCCCCEEEEEecC
Confidence 8999999997 8999877789999986432 122222 112247788887 665 69999876
No 93
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.29 E-value=8.5e-09 Score=88.42 Aligned_cols=226 Identities=10% Similarity=0.046 Sum_probs=131.7
Q ss_pred cEEEEec----CCeEEEEE----CCceEEEEe-eCCccccCeEECCCCc-EEEEeCC----Cce--EEEcc-CC-cEEEe
Q 023085 6 VIYTATR----DGWIKRLQ----DGTWVNWKF-IDSQTLVGLTSTKEGH-LIICDNA----NGL--HKVSE-DG-VENFL 67 (287)
Q Consensus 6 ~l~~~~~----~g~i~~~~----~~~~~~~~~-~~~~~~~~i~~d~dg~-l~v~~~~----~gi--~~~~~-~g-~~~~~ 67 (287)
.+|+|+. +++|+.|. +++.+.... ....|. .+++++||+ ||++... ..+ +.++. +| .+.+.
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~-~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~ 93 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPS-YLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN 93 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCC-SEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCc-eEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee
Confidence 6889973 35677665 466554433 345667 899999997 7777652 345 45553 36 65554
Q ss_pred eecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCC-CeeEEee----c----------c
Q 023085 68 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NITTLVA----D----------G 132 (287)
Q Consensus 68 ~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~----~----------~ 132 (287)
..... ...|..+++ ....+|+++.. .+.+..++..+ +.+..+. . .
T Consensus 94 ~~~~~--~~~p~~~~~-dg~~l~~~~~~-----------------~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 153 (361)
T 3scy_A 94 TQKTM--GADPCYLTT-NGKNIVTANYS-----------------GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQT 153 (361)
T ss_dssp EEECS--SSCEEEEEE-CSSEEEEEETT-----------------TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCS
T ss_pred EeccC--CCCcEEEEE-CCCEEEEEECC-----------------CCEEEEEEeCCCCcCcccceeEEccCCCCCccccC
Confidence 32211 235667777 23357776422 34555555432 3222110 0 0
Q ss_pred ccccceEEEccCCCEEEEEeCCCCEEEEEEecCCC-------Ccce---eEEeccCCCCCcceeeCCCCC-EEEEEeccc
Q 023085 133 FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGER-------KGKL---ETFAENLPGAPDNINLAPDGT-FWIAIIKLD 201 (287)
Q Consensus 133 ~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~-------~~~~---~~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~ 201 (287)
...++.++++|+|+.+|+++...+.+..|+++... +... ..........|.+++++++|+ +|++...
T Consensus 154 ~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-- 231 (361)
T 3scy_A 154 MPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI-- 231 (361)
T ss_dssp SCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT--
T ss_pred CCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC--
Confidence 12347799999999999999888899999886432 1111 122212234588899999997 7777643
Q ss_pred hhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEE---EEECCCCccccceEEEEEe--CCEEEEEec
Q 023085 202 ARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIR---NLVDPTGQLMSFVTSGLQV--DNHLYVISL 276 (287)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~--~g~l~i~~~ 276 (287)
.+.|..++.+...+. .+..... ....+..+..+ +..||+++.
T Consensus 232 --------------------------------~~~v~v~~~~~g~~~~~~~~~~~~~-~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 232 --------------------------------GGTVIAFRYADGMLDEIQTVAADTV-NAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp --------------------------------TCEEEEEEEETTEEEEEEEEESCSS-CCCCEEEEEECTTSSEEEEEEC
T ss_pred --------------------------------CCeEEEEEecCCceEEeEEEecCCC-CCCCcccEEECCCCCEEEEECC
Confidence 235666654433322 2222111 12345666664 456888888
Q ss_pred C-CCeEEEEeCC
Q 023085 277 T-SNFIGKVQLS 287 (287)
Q Consensus 277 ~-~~~i~~~~~~ 287 (287)
. .+.|.+++++
T Consensus 279 ~~~~~i~v~~~~ 290 (361)
T 3scy_A 279 LKADGVAIFKVD 290 (361)
T ss_dssp SSSCEEEEEEEC
T ss_pred CCCCEEEEEEEc
Confidence 7 7888888763
No 94
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.29 E-value=2.5e-09 Score=87.31 Aligned_cols=178 Identities=11% Similarity=0.143 Sum_probs=115.1
Q ss_pred CCcEEEEe-cCCeEEEEE-CCceEEEEeeC--CccccCeEECCCCcEEEEeCC-CceEEEc--cCC-cEEEeeec-C---
Q 023085 4 NGVIYTAT-RDGWIKRLQ-DGTWVNWKFID--SQTLVGLTSTKEGHLIICDNA-NGLHKVS--EDG-VENFLSYV-N--- 71 (287)
Q Consensus 4 ~G~l~~~~-~~g~i~~~~-~~~~~~~~~~~--~~~~~~i~~d~dg~l~v~~~~-~gi~~~~--~~g-~~~~~~~~-~--- 71 (287)
++.||+.+ ..+.|++++ ++++....... ..+. +|+.+++|++|+++.. +.++++. .++ +..+.... .
T Consensus 38 ~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~E-GIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~ 116 (255)
T 3qqz_A 38 SNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLE-TIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQE 116 (255)
T ss_dssp TTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEE-EEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSS
T ss_pred CCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChH-HeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeecccccc
Confidence 35799755 778999999 76665543322 4567 9999999999998644 5677776 333 33222211 1
Q ss_pred CccccccceEEEcCCC-cEEEEcCCCCCCCcceeeeeeccCCCceEEEEe--CCCCeeEEeec-------cccccceEEE
Q 023085 72 GSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYD--PSSNITTLVAD-------GFYFANGVAL 141 (287)
Q Consensus 72 ~~~~~~~~~l~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~-------~~~~~~~i~~ 141 (287)
........+|++++++ +||++... ....|+.++ +.+..++.... ....+.++++
T Consensus 117 ~~~N~g~EGLA~d~~~~~L~va~E~----------------~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~ 180 (255)
T 3qqz_A 117 SPTNCGFEGLAYSRQDHTFWFFKEK----------------NPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEF 180 (255)
T ss_dssp CCCSSCCEEEEEETTTTEEEEEEES----------------SSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEE
T ss_pred ccccCCcceEEEeCCCCEEEEEECc----------------CCceEEEEcccccCCceeeecchhhccccccCCceeEEE
Confidence 1112345799999876 89996322 234688887 22222332211 2345789999
Q ss_pred ccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccC------CCCCcceeeCCCCCEEEEEec
Q 023085 142 SRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENL------PGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 142 ~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~d~~G~lwv~~~~ 199 (287)
+|..+.+|+.+..+..|..+|.++.. .......... -.-|.||++|++|+|||++..
T Consensus 181 dp~tg~lliLS~~s~~L~~~d~~g~~-~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~ 243 (255)
T 3qqz_A 181 NQQKNTLLVLSHESRALQEVTLVGEV-IGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP 243 (255)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTCCE-EEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT
T ss_pred cCCCCeEEEEECCCCeEEEEcCCCCE-EEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC
Confidence 99988999999989999999976531 1111111111 125799999999999999876
No 95
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.26 E-value=3.1e-09 Score=89.63 Aligned_cols=214 Identities=13% Similarity=0.044 Sum_probs=132.8
Q ss_pred CCCC-cEEEEe-cCCeEEEEE--CCceEEEEeeCC------ccccCeEECCCC-cEEEEe------------CCCceEEE
Q 023085 2 DKNG-VIYTAT-RDGWIKRLQ--DGTWVNWKFIDS------QTLVGLTSTKEG-HLIICD------------NANGLHKV 58 (287)
Q Consensus 2 d~~G-~l~~~~-~~g~i~~~~--~~~~~~~~~~~~------~~~~~i~~d~dg-~l~v~~------------~~~gi~~~ 58 (287)
+++| .+|++. .++.|..++ +++......... .+. +++++++| .||++. ....|.++
T Consensus 42 s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~ 120 (337)
T 1pby_B 42 APGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLF-GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120 (337)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTT-CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEE
T ss_pred cCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccccc-ceEECCCCCEEEEEecccccccccccccCceEEEE
Confidence 5677 577776 567899999 555543322222 566 89999999 577774 23578889
Q ss_pred c-cCC-cEEEeeecCCccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccc
Q 023085 59 S-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYF 135 (287)
Q Consensus 59 ~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 135 (287)
+ .++ ....... ...+.+++++++|. ++++ .+.|+.+|..+++..........
T Consensus 121 d~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~--------------------~~~i~~~d~~~~~~~~~~~~~~~ 175 (337)
T 1pby_B 121 DAETLSRRKAFEA-----PRQITMLAWARDGSKLYGL--------------------GRDLHVMDPEAGTLVEDKPIQSW 175 (337)
T ss_dssp ETTTTEEEEEEEC-----CSSCCCEEECTTSSCEEEE--------------------SSSEEEEETTTTEEEEEECSTTT
T ss_pred ECCCCcEEEEEeC-----CCCcceeEECCCCCEEEEe--------------------CCeEEEEECCCCcEeeeeecccc
Confidence 8 566 3322221 13577899999986 7774 34688899887776543332222
Q ss_pred cceEEEccCCCEEEEEeCCCC-----------------------EEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCC
Q 023085 136 ANGVALSRDEDYVVVCESWKF-----------------------RCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT 192 (287)
Q Consensus 136 ~~~i~~~~~~~~l~v~~~~~~-----------------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~ 192 (287)
+..+.++|+++.+|++....+ .|+.+|....+.. ...+ ......|.+++++++|+
T Consensus 176 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~-~~~~~~~~~~~~s~dg~ 253 (337)
T 1pby_B 176 EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREV-RIMDVFYFSTAVNPAKT 253 (337)
T ss_dssp TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEE-EECSSCEEEEEECTTSS
T ss_pred CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-Eeec-CCCCCceeeEEECCCCC
Confidence 334467888887777665444 3567776543222 1111 12223567899999986
Q ss_pred -EEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCCccccceEEEEEe--C
Q 023085 193 -FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV--D 268 (287)
Q Consensus 193 -lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~--~ 268 (287)
+|++ .. .|..++.+ ++.+..+.... .+..+... +
T Consensus 254 ~l~~~-~~------------------------------------~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg 291 (337)
T 1pby_B 254 RAFGA-YN------------------------------------VLESFDLEKNASIKRVPLPH-----SYYSVNVSTDG 291 (337)
T ss_dssp EEEEE-ES------------------------------------EEEEEETTTTEEEEEEECSS-----CCCEEEECTTS
T ss_pred EEEEe-CC------------------------------------eEEEEECCCCcCcceecCCC-----ceeeEEECCCC
Confidence 5655 32 78888876 55556665422 24455554 4
Q ss_pred CEEEEEecCCCeEEEEeC
Q 023085 269 NHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 269 g~l~i~~~~~~~i~~~~~ 286 (287)
..||+++ ..+.|.++++
T Consensus 292 ~~l~~~~-~~~~i~v~d~ 308 (337)
T 1pby_B 292 STVWLGG-ALGDLAAYDA 308 (337)
T ss_dssp CEEEEES-BSSEEEEEET
T ss_pred CEEEEEc-CCCcEEEEEC
Confidence 5688874 4678888876
No 96
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.23 E-value=1.6e-08 Score=88.63 Aligned_cols=240 Identities=10% Similarity=0.055 Sum_probs=149.3
Q ss_pred CCCcEEEEe-cCCeEEEEE--CCceEE-EEeeCCccccCeEECCCCc-EEEEeCC-CceEEEc-cCC-cEEEeeecCCcc
Q 023085 3 KNGVIYTAT-RDGWIKRLQ--DGTWVN-WKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG-VENFLSYVNGSK 74 (287)
Q Consensus 3 ~~G~l~~~~-~~g~i~~~~--~~~~~~-~~~~~~~~~~~i~~d~dg~-l~v~~~~-~gi~~~~-~~g-~~~~~~~~~~~~ 74 (287)
++|.+|++. .++.|..|+ +++... +......+. .++++++|+ ++++... +.|.+++ .++ .......
T Consensus 179 ~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~----- 252 (433)
T 3bws_A 179 EHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSK-ILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK----- 252 (433)
T ss_dssp GGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEE-EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-----
T ss_pred CCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCee-EEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-----
Confidence 467777665 678999999 444433 222234455 889999996 5566533 4588888 666 3222111
Q ss_pred ccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeC
Q 023085 75 LRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCES 153 (287)
Q Consensus 75 ~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~ 153 (287)
...+.+++++++|. ++++...... .....+.|+.+|+.+++..........+..++++|+++.+|++..
T Consensus 253 ~~~~~~~~~~~~g~~l~~~~~~~~~----------~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 322 (433)
T 3bws_A 253 IGLPRGLLLSKDGKELYIAQFSASN----------QESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDM 322 (433)
T ss_dssp CSEEEEEEECTTSSEEEEEEEESCT----------TCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEET
T ss_pred CCCceEEEEcCCCCEEEEEECCCCc----------cccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEec
Confidence 13478899999985 5554211000 001256899999887776554433346778999999999999988
Q ss_pred CCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCC
Q 023085 154 WKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLG 232 (287)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
..+.|..|+.++.+. ...+ .....+..++++++|+ ||+++.... .. ....+..+.
T Consensus 323 ~~~~v~v~d~~~~~~--~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~-~~-------------------~~~~~~~g~ 378 (433)
T 3bws_A 323 CCSKIEVYDLKEKKV--QKSI--PVFDKPNTIALSPDGKYLYVSCRGPN-HP-------------------TEGYLKKGL 378 (433)
T ss_dssp TTTEEEEEETTTTEE--EEEE--ECSSSEEEEEECTTSSEEEEEECCCC-CT-------------------TTCTTSCCS
T ss_pred CCCEEEEEECCCCcE--EEEe--cCCCCCCeEEEcCCCCEEEEEecCCC-cc-------------------ccccccccc
Confidence 889999999764321 1122 1234578899999996 777765310 00 000011122
Q ss_pred CceEEEEECCC-CcEEEEEECCCCccccceEEEEEe--CCEEEEEecCCCeEEEEeCC
Q 023085 233 GGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 233 ~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~~~~i~~~~~~ 287 (287)
..+.|..++.+ ++.+..+... ..+..+... +..|++++...+.|.+++++
T Consensus 379 ~dg~v~~~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 379 VLGKVYVIDTTTDTVKEFWEAG-----NQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp SCCEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred cceEEEEEECCCCcEEEEecCC-----CCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 34688899865 6666666642 245666664 45788887778899998864
No 97
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.21 E-value=1.3e-08 Score=83.10 Aligned_cols=194 Identities=11% Similarity=0.094 Sum_probs=127.1
Q ss_pred ccccCeEECCCC-cEEEEe-CCCceEEEccCC--cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeee
Q 023085 33 QTLVGLTSTKEG-HLIICD-NANGLHKVSEDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDIL 108 (287)
Q Consensus 33 ~~~~~i~~d~dg-~l~v~~-~~~gi~~~~~~g--~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~ 108 (287)
++. ++++++++ +||+.. ....|+.++.+| ...+ +. .+ ...+.+|+++.+|.+|+++..
T Consensus 28 ~lS-Gla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i-~l-~g--~~D~EGIa~~~~g~~~vs~E~------------- 89 (255)
T 3qqz_A 28 NIS-SLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTI-PL-DF--VKDLETIEYIGDNQFVISDER------------- 89 (255)
T ss_dssp CEE-EEEEETTTTEEEEEEETTEEEEEEETTCCEEEEE-EC-SS--CSSEEEEEECSTTEEEEEETT-------------
T ss_pred Ccc-eeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEE-ec-CC--CCChHHeEEeCCCEEEEEECC-------------
Confidence 445 89999865 799864 435699999557 3333 21 11 246789999999999997432
Q ss_pred ccCCCceEEEEeCCC-CeeE---Eeeccc-cc-----cceEEEccCCCEEEEEeCCCC-EEEEEEecCC-CCcceeEEec
Q 023085 109 EGKPHGQLLKYDPSS-NITT---LVADGF-YF-----ANGVALSRDEDYVVVCESWKF-RCRKYWLKGE-RKGKLETFAE 176 (287)
Q Consensus 109 ~~~~~~~v~~~~~~~-~~~~---~~~~~~-~~-----~~~i~~~~~~~~l~v~~~~~~-~l~~~~~~~~-~~~~~~~~~~ 176 (287)
.+.++.++... +.+. ....++ .. ..|++++|+++.||++..... +|+.++ +. ..........
T Consensus 90 ----~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~~ 163 (255)
T 3qqz_A 90 ----DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISKD 163 (255)
T ss_dssp ----TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEEC
T ss_pred ----CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeecc
Confidence 34555554321 2211 111111 12 379999999988999887655 778877 21 0011111110
Q ss_pred ------cCCCCCcceeeCC-CCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEE
Q 023085 177 ------NLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRN 249 (287)
Q Consensus 177 ------~~~~~~~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~ 249 (287)
.....+.++++|+ .|++|+.+.. ...|+.+|++|+.+..
T Consensus 164 ~~~~~~~~~~d~S~l~~dp~tg~lliLS~~----------------------------------s~~L~~~d~~g~~~~~ 209 (255)
T 3qqz_A 164 KALQRQFTLDDVSGAEFNQQKNTLLVLSHE----------------------------------SRALQEVTLVGEVIGE 209 (255)
T ss_dssp HHHHHTCCSSCCCEEEEETTTTEEEEEETT----------------------------------TTEEEEECTTCCEEEE
T ss_pred hhhccccccCCceeEEEcCCCCeEEEEECC----------------------------------CCeEEEEcCCCCEEEE
Confidence 0112478899998 5789999887 2489999999998888
Q ss_pred EECCCCc-----cccceEEEEEe-CCEEEEEecCCCeEEEEe
Q 023085 250 LVDPTGQ-----LMSFVTSGLQV-DNHLYVISLTSNFIGKVQ 285 (287)
Q Consensus 250 ~~~~~~~-----~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~ 285 (287)
+....+. .+..+.+++++ +|+|||.+ ..|.+++|.
T Consensus 210 ~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs-E~n~~y~f~ 250 (255)
T 3qqz_A 210 MSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS-EPNRFYRFT 250 (255)
T ss_dssp EECSTTGGGCSSCCCSEEEEEECTTCCEEEEE-TTTEEEEEE
T ss_pred EEcCCccCCcccccCCCCeeEECCCCCEEEEc-CCceEEEEE
Confidence 8776442 24678999998 69999995 667888875
No 98
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.18 E-value=2.2e-09 Score=92.41 Aligned_cols=163 Identities=13% Similarity=0.120 Sum_probs=99.8
Q ss_pred eEEEEeeCCccccCeEECCCCc-EEEEeCCCceEEEccCC-cE-EEeeec--CCccccccceEEEcC----CCcEEEEcC
Q 023085 24 WVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVSEDG-VE-NFLSYV--NGSKLRFANDVVEAS----DGSLYFTVS 94 (287)
Q Consensus 24 ~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~~gi~~~~~~g-~~-~~~~~~--~~~~~~~~~~l~~d~----~g~l~v~~~ 94 (287)
.+.+......|. +|+++++|+ |||++....|++++.+| .. .+.... .......+.+|++++ ++.||+++.
T Consensus 10 ~~~va~~l~~P~-~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~ 88 (353)
T 2g8s_A 10 VEVLQDKLDHPW-ALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYS 88 (353)
T ss_dssp EEEEEEEESSEE-EEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEE
T ss_pred EEEEECCCCCcE-EEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEe
Confidence 344445456788 999999999 99999776788888666 33 222111 011123568899998 589999743
Q ss_pred CCCCCCcceeeeeeccCCCceEEEEeCCCC--e---eEEeec-------cccccceEEEccCCCEEEEEeCC--------
Q 023085 95 SSKYLPHEYCLDILEGKPHGQLLKYDPSSN--I---TTLVAD-------GFYFANGVALSRDEDYVVVCESW-------- 154 (287)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~---~~~~~~-------~~~~~~~i~~~~~~~~l~v~~~~-------- 154 (287)
.... .+.....|.+++.+.+ . .+.+.. ....+.+++++||| .||++.-.
T Consensus 89 ~~~~----------~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~Gd~~~~~~~q 157 (353)
T 2g8s_A 89 EVGD----------DGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALGENNQRPTAQ 157 (353)
T ss_dssp EECS----------SSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEECCTTCGGGGG
T ss_pred CCCC----------CCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEECCCCCCCccC
Confidence 2000 0000235777765322 2 222211 12346789999999 59999632
Q ss_pred -----CCEEEEEEecCCCC----------cceeEEeccCCCCCcceeeCC-CCCEEEEEec
Q 023085 155 -----KFRCRKYWLKGERK----------GKLETFAENLPGAPDNINLAP-DGTFWIAIIK 199 (287)
Q Consensus 155 -----~~~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~i~~d~-~G~lwv~~~~ 199 (287)
.++|++++.++... ...+.+.... ..|.++++|+ +|+||++...
T Consensus 158 ~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g 217 (353)
T 2g8s_A 158 DLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHG 217 (353)
T ss_dssp CTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecC
Confidence 35899999865210 0223333211 2489999999 8999999876
No 99
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.15 E-value=2.2e-08 Score=81.48 Aligned_cols=191 Identities=11% Similarity=0.104 Sum_probs=122.5
Q ss_pred ccCeEECCCCcEEEEeCCC---ceEEEc-cCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeec
Q 023085 35 LVGLTSTKEGHLIICDNAN---GLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILE 109 (287)
Q Consensus 35 ~~~i~~d~dg~l~v~~~~~---gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~ 109 (287)
. |+.++ ++.||+++... .|.++| .+| +..-.... +..+..+++++ .++||+++.
T Consensus 46 q-GL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~---~~~FgeGit~~-g~~ly~ltw--------------- 104 (262)
T 3nol_A 46 E-GFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG---KRYFGEGISDW-KDKIVGLTW--------------- 104 (262)
T ss_dssp E-EEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC---TTCCEEEEEEE-TTEEEEEES---------------
T ss_pred c-eEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC---CccceeEEEEe-CCEEEEEEe---------------
Confidence 5 88888 78999997543 589999 777 33322221 11234556766 458999632
Q ss_pred cCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCc-ceeEEeccCC-CCCcceee
Q 023085 110 GKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKG-KLETFAENLP-GAPDNINL 187 (287)
Q Consensus 110 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~-~~~~~i~~ 187 (287)
..+.++.+|+++.++..-... .+.|..+++|++.||+++. .++|+.+|.++.+.. +........+ ..++.+..
T Consensus 105 --~~~~v~v~D~~t~~~~~ti~~--~~eG~glt~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~ 179 (262)
T 3nol_A 105 --KNGLGFVWNIRNLRQVRSFNY--DGEGWGLTHNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEW 179 (262)
T ss_dssp --SSSEEEEEETTTCCEEEEEEC--SSCCCCEEECSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEE
T ss_pred --eCCEEEEEECccCcEEEEEEC--CCCceEEecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEE
Confidence 256899999987765432221 1255555577888999984 788999997643221 1111110011 22344565
Q ss_pred CCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCCc--------cc
Q 023085 188 APDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQ--------LM 258 (287)
Q Consensus 188 d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~--------~~ 258 (287)
. +|.||+..+. ...|.++||+ |+.+..+..+... ..
T Consensus 180 ~-~G~lyan~w~----------------------------------~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~ 224 (262)
T 3nol_A 180 V-DGEIFANVWQ----------------------------------TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPI 224 (262)
T ss_dssp E-TTEEEEEETT----------------------------------SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSC
T ss_pred E-CCEEEEEEcc----------------------------------CCeEEEEECCCCcEEEEEECCcCccccccccCcC
Confidence 5 7899998876 3589999986 7888888764211 12
Q ss_pred cceEEEEEe--CCEEEEEecCCCeEEEEeC
Q 023085 259 SFVTSGLQV--DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 259 ~~~~~~~~~--~g~l~i~~~~~~~i~~~~~ 286 (287)
+.+.+++.+ .++|||++..=+.+..+.|
T Consensus 225 ~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 225 DVLNGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp CCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred CceEEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 345777776 4899999999888877654
No 100
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.14 E-value=2.9e-08 Score=86.99 Aligned_cols=219 Identities=12% Similarity=0.076 Sum_probs=141.3
Q ss_pred CCCCcEEEEe-cCCeEEEEE--CCceEEEEee------CCccccCeEECCCCcEEEEeCC-CceEEEc-cCC--cEEEee
Q 023085 2 DKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFI------DSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VENFLS 68 (287)
Q Consensus 2 d~~G~l~~~~-~~g~i~~~~--~~~~~~~~~~------~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~-~~g--~~~~~~ 68 (287)
++++.++++. .++.|..|+ +++....... ..... ++++.++|++|++... ..|.+++ .++ ...+..
T Consensus 131 s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~ 209 (433)
T 3bws_A 131 IDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVE-TISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDL 209 (433)
T ss_dssp SSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEE-EEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEEC
T ss_pred eCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCcee-EEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcC
Confidence 3467788776 456799999 4555432211 11233 6888899999888655 4588888 555 333321
Q ss_pred ecCCccccccceEEEcCCCcE-EEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCE
Q 023085 69 YVNGSKLRFANDVVEASDGSL-YFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDY 147 (287)
Q Consensus 69 ~~~~~~~~~~~~l~~d~~g~l-~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 147 (287)
....+.+++++++|.. +++. ...+.|..+|..+++..........+.+++++|+++.
T Consensus 210 -----~~~~~~~~~~~~~~~~l~~~~-----------------~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~ 267 (433)
T 3bws_A 210 -----TGKWSKILLYDPIRDLVYCSN-----------------WISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKE 267 (433)
T ss_dssp -----SSSSEEEEEEETTTTEEEEEE-----------------TTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSE
T ss_pred -----CCCCeeEEEEcCCCCEEEEEe-----------------cCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCE
Confidence 1236788999998864 4542 2356899999887776554444456788999999998
Q ss_pred EEEEeC-------CCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHH
Q 023085 148 VVVCES-------WKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLA 219 (287)
Q Consensus 148 l~v~~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~ 219 (287)
++++.. ..+.|..|++...+. .... ...+.+.+++++++|+ +|++...
T Consensus 268 l~~~~~~~~~~~~~dg~i~~~d~~~~~~--~~~~--~~~~~~~~~~~~~~g~~l~~~~~~-------------------- 323 (433)
T 3bws_A 268 LYIAQFSASNQESGGGRLGIYSMDKEKL--IDTI--GPPGNKRHIVSGNTENKIYVSDMC-------------------- 323 (433)
T ss_dssp EEEEEEESCTTCSCCEEEEEEETTTTEE--EEEE--EEEECEEEEEECSSTTEEEEEETT--------------------
T ss_pred EEEEECCCCccccCCCeEEEEECCCCcE--Eeec--cCCCCcceEEECCCCCEEEEEecC--------------------
Confidence 888874 345788999764321 1111 1122577899999985 7777654
Q ss_pred hCCccccccccCCCceEEEEECCC-CcEEEEEECCCCccccceEEEEEe--CCEEEEEecCCC--------------eEE
Q 023085 220 AYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSN--------------FIG 282 (287)
Q Consensus 220 ~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~~~--------------~i~ 282 (287)
.+.|..++.+ ++....+... ..+..+... +..||+++...+ .|.
T Consensus 324 --------------~~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~ 384 (433)
T 3bws_A 324 --------------CSKIEVYDLKEKKVQKSIPVF-----DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVY 384 (433)
T ss_dssp --------------TTEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEE
T ss_pred --------------CCEEEEEECCCCcEEEEecCC-----CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEE
Confidence 3578888876 5555555532 235566664 356888887643 777
Q ss_pred EEeC
Q 023085 283 KVQL 286 (287)
Q Consensus 283 ~~~~ 286 (287)
++|+
T Consensus 385 ~~d~ 388 (433)
T 3bws_A 385 VIDT 388 (433)
T ss_dssp EEET
T ss_pred EEEC
Confidence 7775
No 101
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.13 E-value=2e-08 Score=91.44 Aligned_cols=230 Identities=14% Similarity=0.087 Sum_probs=138.8
Q ss_pred CCCCC-cEEEEecCCeEEEEEC--CceE--EEEeeCCccccCeEECC----CCc-EEEEeC-CCceEEEc-cCC--cEEE
Q 023085 1 MDKNG-VIYTATRDGWIKRLQD--GTWV--NWKFIDSQTLVGLTSTK----EGH-LIICDN-ANGLHKVS-EDG--VENF 66 (287)
Q Consensus 1 ~d~~G-~l~~~~~~g~i~~~~~--~~~~--~~~~~~~~~~~~i~~d~----dg~-l~v~~~-~~gi~~~~-~~g--~~~~ 66 (287)
++++| .||+++.++.|..|+- ...+ ........|. ++++++ ||+ ||++.. ...|..+| .++ +..+
T Consensus 186 ~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~-~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i 264 (543)
T 1nir_A 186 MSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEAR-SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIV 264 (543)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEE-EEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEE
T ss_pred ECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcc-eEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceee
Confidence 35677 6889888899999992 3322 2223345677 899999 995 788864 35688888 666 3333
Q ss_pred eeec---CC---ccccccceEEEcCCCcE-EEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE--eeccccccc
Q 023085 67 LSYV---NG---SKLRFANDVVEASDGSL-YFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL--VADGFYFAN 137 (287)
Q Consensus 67 ~~~~---~~---~~~~~~~~l~~d~~g~l-~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~ 137 (287)
.... .. .+...+.++++++++.. +++. ...+.|+.+|..+.+... .......+.
T Consensus 265 ~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~-----------------~~~g~i~vvd~~~~~~l~~~~i~~~~~~~ 327 (543)
T 1nir_A 265 STRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV-----------------KETGKVLLVNYKDIDNLTVTSIGAAPFLH 327 (543)
T ss_dssp ECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE-----------------TTTTEEEEEECTTSSSCEEEEEECCSSCC
T ss_pred cccCcccCccccccCCceEEEEECCCCCEEEEEE-----------------CCCCeEEEEEecCCCcceeEEeccCcCcc
Confidence 2210 00 01225678888887654 4432 235688888876543211 112345688
Q ss_pred eEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCC-ccee-eCCC-CCEEEEEeccchhHHHHhhcchhH
Q 023085 138 GVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAP-DNIN-LAPD-GTFWIAIIKLDARRMKILNSSKLI 214 (287)
Q Consensus 138 ~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~i~-~d~~-G~lwv~~~~~~~~~~~~~~~~~~~ 214 (287)
+++|+|+++++|++....+.|..+|.+..+.. ..+.......| .+.. .+++ |.+|++....
T Consensus 328 ~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~--~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~-------------- 391 (543)
T 1nir_A 328 DGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS--ALVDVGKTPHPGRGANFVHPKYGPVWSTSHLG-------------- 391 (543)
T ss_dssp CEEECTTSCEEEEEEGGGTEEEEEETTTTEEE--EEEECSSSBCCTTCEEEEETTTEEEEEEEBSS--------------
T ss_pred CceECCCCCEEEEEecCCCeEEEEECCCCeEE--EeeccCCCCCCCCCcccCCCCCccEEEeccCC--------------
Confidence 99999999999999888889999997643221 11111111112 2333 3666 7899887531
Q ss_pred HHHHHhCCccccccccCCCceEEEEECCC--------CcEEEEEECCCCccccceEEEEE--eCCEEEEEecC------C
Q 023085 215 KHVLAAYPKLFSQFITLGGGAHLIHVAED--------GTIIRNLVDPTGQLMSFVTSGLQ--VDNHLYVISLT------S 278 (287)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--------g~~~~~~~~~~~~~~~~~~~~~~--~~g~l~i~~~~------~ 278 (287)
.+.|..++.+ .+.++.+....+ .+..+.. ++.+||+++.. +
T Consensus 392 -------------------d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~----~~~~v~~~pdg~~l~v~~~~~~~~~~~ 448 (543)
T 1nir_A 392 -------------------DGSISLIGTDPKNHPQYAWKKVAELQGQGG----GSLFIKTHPKSSHLYVDTTFNPDARIS 448 (543)
T ss_dssp -------------------SSEEEEEECCTTTCTTTBTSEEEEEECSCS----CCCCEECCTTCCEEEECCTTCSSHHHH
T ss_pred -------------------CceEEEEEeCCCCCchhcCeEEEEEEcCCC----CceEEEcCCCCCcEEEecCCCCCcccC
Confidence 1345555432 467777775332 2233333 46889998742 4
Q ss_pred CeEEEEeCC
Q 023085 279 NFIGKVQLS 287 (287)
Q Consensus 279 ~~i~~~~~~ 287 (287)
+.|.++|++
T Consensus 449 ~~v~v~d~~ 457 (543)
T 1nir_A 449 QSVAVFDLK 457 (543)
T ss_dssp TCEEEEETT
T ss_pred ceEEEEECC
Confidence 489998864
No 102
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.09 E-value=8.6e-08 Score=80.63 Aligned_cols=150 Identities=11% Similarity=-0.012 Sum_probs=94.8
Q ss_pred cEEEEecCCeEEEEE--CCceEEEEeeCC---ccccCeEECCCC-cEEEEeCC-CceEEEc-cCC-c-EEEeeecCCccc
Q 023085 6 VIYTATRDGWIKRLQ--DGTWVNWKFIDS---QTLVGLTSTKEG-HLIICDNA-NGLHKVS-EDG-V-ENFLSYVNGSKL 75 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~~~~~~~~~---~~~~~i~~d~dg-~l~v~~~~-~gi~~~~-~~g-~-~~~~~~~~~~~~ 75 (287)
.|..+..++.|..++ +++......... .|. +++++++| .+|++... ..|.+++ .++ . ..+.....+...
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPM-VPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCC-CEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCcc-ceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 355566889999999 555544444444 577 99999999 57787654 4588898 666 3 333211111111
Q ss_pred cccceEEEcCCC-cEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCC
Q 023085 76 RFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESW 154 (287)
Q Consensus 76 ~~~~~l~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~ 154 (287)
..|.+++++++| .+|+++...... ..+. ....+.|+.+|..+++..........+.+++++|+++.+|++
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~-~~~~-----~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--- 152 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLE-LTHF-----EVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--- 152 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEEC-SSCE-----EECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE---
T ss_pred ccccceEECCCCCEEEEEecccccc-cccc-----cccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe---
Confidence 257889999998 567753110000 0000 002467999999877765443334567889999999989998
Q ss_pred CCEEEEEEecC
Q 023085 155 KFRCRKYWLKG 165 (287)
Q Consensus 155 ~~~l~~~~~~~ 165 (287)
++.|+.+++++
T Consensus 153 ~~~i~~~d~~~ 163 (337)
T 1pby_B 153 GRDLHVMDPEA 163 (337)
T ss_dssp SSSEEEEETTT
T ss_pred CCeEEEEECCC
Confidence 35799999764
No 103
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.09 E-value=1.6e-07 Score=85.65 Aligned_cols=227 Identities=9% Similarity=-0.055 Sum_probs=139.9
Q ss_pred CCCCcEEEEe-cCCeEEEEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeCCCceEEEc-c--CCcEEEeeecCCcc
Q 023085 2 DKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVS-E--DGVENFLSYVNGSK 74 (287)
Q Consensus 2 d~~G~l~~~~-~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~~gi~~~~-~--~g~~~~~~~~~~~~ 74 (287)
|..+.+|+.. .++.|..+| +++..........|. ++++++||+ +|++.....|..+| . ++ +.+.....+
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~-~v~~SpDGr~lyv~~~dg~V~viD~~~~t~-~~v~~i~~G-- 239 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVH-ISRLSASGRYLFVIGRDGKVNMIDLWMKEP-TTVAEIKIG-- 239 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEE-EEEECTTSCEEEEEETTSEEEEEETTSSSC-CEEEEEECC--
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCcc-ceEECCCCCEEEEEcCCCeEEEEECCCCCC-cEeEEEecC--
Confidence 3344677766 568899999 555554444555677 899999995 78887656799999 4 33 222221112
Q ss_pred ccccceEEEc----CCC-cEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccc-----------cccc
Q 023085 75 LRFANDVVEA----SDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGF-----------YFAN 137 (287)
Q Consensus 75 ~~~~~~l~~d----~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~-----------~~~~ 137 (287)
..|..++++ ++| .+|+++.. .+.|..+|..+.+.... .... ....
T Consensus 240 -~~P~~ia~s~~~~pDGk~l~v~n~~-----------------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva 301 (567)
T 1qks_A 240 -SEARSIETSKMEGWEDKYAIAGAYW-----------------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVA 301 (567)
T ss_dssp -SEEEEEEECCSTTCTTTEEEEEEEE-----------------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEE
T ss_pred -CCCceeEEccccCCCCCEEEEEEcc-----------------CCeEEEEECCCCcEEEEEeccccccccccccCCCceE
Confidence 357889999 588 57776422 46788888877664432 1110 1234
Q ss_pred eEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHH
Q 023085 138 GVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKH 216 (287)
Q Consensus 138 ~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~ 216 (287)
++..++++..+++.....+.|+.+|....+......+ .....+.++.+|++|+ +|+++..
T Consensus 302 ~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i--~~~~~~~d~~~~pdgr~~~va~~~----------------- 362 (567)
T 1qks_A 302 AILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI--SAERFLHDGGLDGSHRYFITAANA----------------- 362 (567)
T ss_dssp EEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE--ECCSSEEEEEECTTSCEEEEEEGG-----------------
T ss_pred EEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee--eccccccCceECCCCCEEEEEeCC-----------------
Confidence 6777888887888877778999999754321111111 1223577889999997 4555544
Q ss_pred HHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCCcccc--ceEEEEEe-CCEEEEEec-CCCeEEEEeCC
Q 023085 217 VLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMS--FVTSGLQV-DNHLYVISL-TSNFIGKVQLS 287 (287)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~--~~~~~~~~-~g~l~i~~~-~~~~i~~~~~~ 287 (287)
.+.|..+|.+ ++....+..- +.... ....+... .+.+|+++. ..+.|.+++.+
T Consensus 363 -----------------sn~V~ViD~~t~kl~~~i~vg-g~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~ 420 (567)
T 1qks_A 363 -----------------RNKLVVIDTKEGKLVAIEDTG-GQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTD 420 (567)
T ss_dssp -----------------GTEEEEEETTTTEEEEEEECS-SSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECC
T ss_pred -----------------CCeEEEEECCCCcEEEEEecc-CcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCC
Confidence 2478889876 5555555430 22111 11223222 488998775 45899999864
No 104
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.09 E-value=1.6e-08 Score=83.05 Aligned_cols=142 Identities=11% Similarity=0.038 Sum_probs=98.5
Q ss_pred CCcEEEEe-cCCeEEEEE--CCceEEEEeeCCccccCeEECCCC-cEEEEeCCCceEEEc-cCC--cEEEeeecCCcccc
Q 023085 4 NGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEG-HLIICDNANGLHKVS-EDG--VENFLSYVNGSKLR 76 (287)
Q Consensus 4 ~G~l~~~~-~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg-~l~v~~~~~gi~~~~-~~g--~~~~~~~~~~~~~~ 76 (287)
.+.||+++ .++.+..+| +.+........ .+. +..+.+|| +||+++..+.|..+| .+. ...+.-...+.+..
T Consensus 75 g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~~-g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~ 152 (266)
T 2iwa_A 75 NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MKD-GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVI 152 (266)
T ss_dssp TTEEEEEETTCSEEEEEETTTTEEEEEEECC-SSS-CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred CCEEEEEEecCCEEEEEECCCCcEEEEEECC-CCC-eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccc
Confidence 35899999 578899999 34333322223 344 55555566 799998556799999 554 44443232334555
Q ss_pred ccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeec--cc------------cccceEEEc
Q 023085 77 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--GF------------YFANGVALS 142 (287)
Q Consensus 77 ~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~------------~~~~~i~~~ 142 (287)
.++.+.+. +|.+|+.+.. .+.|.++|+.++++..... .. ..++||+++
T Consensus 153 ~~nele~~-dg~lyvn~~~-----------------~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 153 RLNELEYI-NGEVWANIWQ-----------------TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWD 214 (266)
T ss_dssp CEEEEEEE-TTEEEEEETT-----------------SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEE
T ss_pred cceeEEEE-CCEEEEecCC-----------------CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEc
Confidence 68888877 7899996422 4689999999888644321 11 356999999
Q ss_pred cCCCEEEEEeCCCCEEEEEEecC
Q 023085 143 RDEDYVVVCESWKFRCRKYWLKG 165 (287)
Q Consensus 143 ~~~~~l~v~~~~~~~l~~~~~~~ 165 (287)
|+++.+||+....++|+.+++..
T Consensus 215 ~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 215 QENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCCCEEEEECCCCCeEEEEEEec
Confidence 99999999998889999988753
No 105
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.08 E-value=7e-09 Score=87.07 Aligned_cols=160 Identities=14% Similarity=0.147 Sum_probs=103.2
Q ss_pred ccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee-cc-------ccccceEEE---c
Q 023085 75 LRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DG-------FYFANGVAL---S 142 (287)
Q Consensus 75 ~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~-------~~~~~~i~~---~ 142 (287)
...|.+...|. +|.+|+++.. .+.|.+++++++....+. .. ...+.|+.+ +
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~-----------------~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D 74 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLY-----------------KGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHD 74 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETT-----------------TTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSS
T ss_pred ccCCcCccCcCCCCEEEEEecc-----------------CCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccC
Confidence 34788899976 6899998533 578999999855443332 22 124689999 7
Q ss_pred cCCCEEEE-EeC------------CCCEEEEEEec---CCCCcceeEE---ecc-------CCCCCcceeeCCCCCEEEE
Q 023085 143 RDEDYVVV-CES------------WKFRCRKYWLK---GERKGKLETF---AEN-------LPGAPDNINLAPDGTFWIA 196 (287)
Q Consensus 143 ~~~~~l~v-~~~------------~~~~l~~~~~~---~~~~~~~~~~---~~~-------~~~~~~~i~~d~~G~lwv~ 196 (287)
++++ ||+ ++. ....|.+||++ +.+......+ ... ..+.++++++|++|++||+
T Consensus 75 ~~gr-L~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt 153 (334)
T 2p9w_A 75 NSKR-LFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA 153 (334)
T ss_dssp SCCE-EEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEE
T ss_pred CCCc-EEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEe
Confidence 8865 666 442 24679999987 2221111110 000 1124789999999999997
Q ss_pred EeccchhHHHHhhcchhHHHHHHhCCccccccccCCCc-eEEEEECCCCcEEEEEEC--CCCccccceEEEEEe-CC-EE
Q 023085 197 IIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGG-AHLIHVAEDGTIIRNLVD--PTGQLMSFVTSGLQV-DN-HL 271 (287)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~-~g-~l 271 (287)
... . +.|+|++|+|+.+..+.. +.........++... +| .|
T Consensus 154 ~s~----------------------------------~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~L 199 (334)
T 2p9w_A 154 FAL----------------------------------GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKL 199 (334)
T ss_dssp EEE----------------------------------SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEE
T ss_pred CCC----------------------------------CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEE
Confidence 665 2 589999999986554432 222222345677766 44 56
Q ss_pred EEEecCCCeEEEEeCC
Q 023085 272 YVISLTSNFIGKVQLS 287 (287)
Q Consensus 272 ~i~~~~~~~i~~~~~~ 287 (287)
++... ..+|.+||+.
T Consensus 200 iv~~~-~g~L~~fD~~ 214 (334)
T 2p9w_A 200 IAFGG-PRALTAFDVS 214 (334)
T ss_dssp EEESS-SSSEEEEECS
T ss_pred EEEcC-CCeEEEEcCC
Confidence 66666 8999999863
No 106
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.07 E-value=1.1e-07 Score=83.52 Aligned_cols=233 Identities=10% Similarity=-0.003 Sum_probs=129.9
Q ss_pred cEEEEecC-----CeEEEEE--CCceEEEEeeCCccccCeEECCCC-cEEEEeC----------CCceEEEc-cCC--cE
Q 023085 6 VIYTATRD-----GWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEG-HLIICDN----------ANGLHKVS-EDG--VE 64 (287)
Q Consensus 6 ~l~~~~~~-----g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg-~l~v~~~----------~~gi~~~~-~~g--~~ 64 (287)
.+|+.+.. +.|..+| +++..........| ++++++|| +||+++. .+.|..+| .++ ..
T Consensus 86 ~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~ 163 (426)
T 3c75_H 86 RVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIA 163 (426)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEE
T ss_pred EEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEE
Confidence 68998853 6899999 55555444455555 89999999 5999974 23589999 666 33
Q ss_pred EEeee-cC-CccccccceEEEcCCC-cEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-eecc---ccccc
Q 023085 65 NFLSY-VN-GSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADG---FYFAN 137 (287)
Q Consensus 65 ~~~~~-~~-~~~~~~~~~l~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~---~~~~~ 137 (287)
.+.-. .. ......|..++++++| .+|+++.. ..+.|..+|..++++.. +.-+ ...|.
T Consensus 164 ~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----------------~~~~VsVID~~t~kvv~~I~v~g~~~~~p~ 227 (426)
T 3c75_H 164 DIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----------------PAPAVGVVDLEGKTFDRMLDVPDCYHIFPA 227 (426)
T ss_dssp EEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----------------SSCEEEEEETTTTEEEEEEECCSEEEEEEE
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEecC----------------CCCeEEEEECCCCeEEEEEEcCCceeeccC
Confidence 33211 00 0012468899999998 58887532 12345555555444321 1100 00111
Q ss_pred -----------------------------------------eEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEe-
Q 023085 138 -----------------------------------------GVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFA- 175 (287)
Q Consensus 138 -----------------------------------------~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~- 175 (287)
.+.++++++.+|+... .++++.+|..+....-...+.
T Consensus 228 g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~~~~v~~~~~~ 306 (426)
T 3c75_H 228 SPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TGKIFQADLTAEGATFRAPIEA 306 (426)
T ss_dssp ETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TSEEEEEEECSSCEEECCCEES
T ss_pred CCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CCcEEEEeccCCceEEeeeeee
Confidence 1234555555555543 456667766432111000000
Q ss_pred -c-------cCCCCCcceeeCCCC-CEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-Cc
Q 023085 176 -E-------NLPGAPDNINLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GT 245 (287)
Q Consensus 176 -~-------~~~~~~~~i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~ 245 (287)
. ..+.....++++++| ++|++....... ......+.|..+|.+ .+
T Consensus 307 ~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~g-------------------------thk~~s~~VsVID~~T~k 361 (426)
T 3c75_H 307 LTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEW-------------------------KHKAASRFVVVLNAETGE 361 (426)
T ss_dssp SCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTT-------------------------CTTSCEEEEEEEETTTCC
T ss_pred ccccccccccccCCceeeEEcCCCCEEEEEecccccc-------------------------cccCCCCEEEEEECCCCe
Confidence 0 001112338888875 689987531000 000013579999976 66
Q ss_pred EEEEEECCCCccccceEEEEEe--CC-EEEEEecCCCeEEEEeCC
Q 023085 246 IIRNLVDPTGQLMSFVTSGLQV--DN-HLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~--~g-~l~i~~~~~~~i~~~~~~ 287 (287)
.+..+.... .+.++.+. +. +||+++..++.|.++|+.
T Consensus 362 vv~~I~vg~-----~P~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 362 RINKIELGH-----EIDSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp EEEEEEEEE-----EECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred EEEEEECCC-----CcCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 777776432 35556554 45 688888889999999963
No 107
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.07 E-value=3.2e-08 Score=80.50 Aligned_cols=188 Identities=14% Similarity=0.102 Sum_probs=121.1
Q ss_pred CeEECCCCcEEEEeCCC-ceEEEc-cCC--cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCC
Q 023085 37 GLTSTKEGHLIICDNAN-GLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKP 112 (287)
Q Consensus 37 ~i~~d~dg~l~v~~~~~-gi~~~~-~~g--~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ 112 (287)
++.++ +++||+++... .|.++| .+| ...+ .. . ..+..+++++ .++||+++. .
T Consensus 59 GL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~-~--~~FgeGit~~-g~~Ly~ltw-----------------~ 114 (268)
T 3nok_A 59 GLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME--RL-G--NIFAEGLASD-GERLYQLTW-----------------T 114 (268)
T ss_dssp EEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE--EC-T--TCCEEEEEEC-SSCEEEEES-----------------S
T ss_pred eEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE--CC-C--CcceeEEEEe-CCEEEEEEc-----------------c
Confidence 77777 57999998664 478888 777 4443 21 1 1233557776 458999631 3
Q ss_pred CceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCC---CCCcceeeCC
Q 023085 113 HGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLP---GAPDNINLAP 189 (287)
Q Consensus 113 ~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~d~ 189 (287)
.+.++.+|+++.++..-... .+.|..+.+|++.||+++ ..++|+.+|.++.+... ..-+...+ ..++.+...
T Consensus 115 ~~~v~V~D~~Tl~~~~ti~~--~~eGwGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~-~I~V~~~g~~v~~lNeLe~~- 189 (268)
T 3nok_A 115 EGLLFTWSGMPPQRERTTRY--SGEGWGLCYWNGKLVRSD-GGTMLTFHEPDGFALVG-AVQVKLRGQPVELINELECA- 189 (268)
T ss_dssp SCEEEEEETTTTEEEEEEEC--SSCCCCEEEETTEEEEEC-SSSEEEEECTTTCCEEE-EEECEETTEECCCEEEEEEE-
T ss_pred CCEEEEEECCcCcEEEEEeC--CCceeEEecCCCEEEEEC-CCCEEEEEcCCCCeEEE-EEEeCCCCcccccccccEEe-
Confidence 56899999988775432222 234444457788999998 57899999976432211 11111111 123445554
Q ss_pred CCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCC---------cccc
Q 023085 190 DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTG---------QLMS 259 (287)
Q Consensus 190 ~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~---------~~~~ 259 (287)
+|.||+..+. ...|.++||+ |+.+..+....- ...+
T Consensus 190 dG~lyanvw~----------------------------------s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~ 235 (268)
T 3nok_A 190 NGVIYANIWH----------------------------------SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEA 235 (268)
T ss_dssp TTEEEEEETT----------------------------------CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTC
T ss_pred CCEEEEEECC----------------------------------CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCC
Confidence 8899988876 3589999986 778887764310 0123
Q ss_pred ceEEEEEe--CCEEEEEecCCCeEEEEeCC
Q 023085 260 FVTSGLQV--DNHLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 260 ~~~~~~~~--~g~l~i~~~~~~~i~~~~~~ 287 (287)
...+++.+ .++|||++..=+.+..+.|+
T Consensus 236 vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~~ 265 (268)
T 3nok_A 236 VLNGIAVEPGSGRIFMTGKLWPRLFEVRLD 265 (268)
T ss_dssp CEEEEEECTTTCCEEEEETTCSEEEEEEEE
T ss_pred ceEEEEEcCCCCEEEEeCCCCCceEEEEEE
Confidence 55777776 58999999998888877653
No 108
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.06 E-value=5.6e-08 Score=83.93 Aligned_cols=215 Identities=13% Similarity=0.141 Sum_probs=123.6
Q ss_pred CCcEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCCCceEEEc-cCCcEEEeeecCCcc--cccc
Q 023085 4 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDGVENFLSYVNGSK--LRFA 78 (287)
Q Consensus 4 ~G~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g~~~~~~~~~~~~--~~~~ 78 (287)
+|.||+++.++.|+.++ +|+................+ .++.+|+++...+++.++ .+|............ ....
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 57899999999999999 57764333333222212333 378999998766799999 678222211111111 0111
Q ss_pred ceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccc-----------c-ceEEEccCCC
Q 023085 79 NDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYF-----------A-NGVALSRDED 146 (287)
Q Consensus 79 ~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----------~-~~i~~~~~~~ 146 (287)
...+++ ++.+|+. ...+.|+.+|+++|+.......... . ...++ .+.
T Consensus 182 ~~~~~~-~~~v~~g------------------~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~ 240 (376)
T 3q7m_A 182 SAPTTA-FGAAVVG------------------GDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNG 240 (376)
T ss_dssp CCCEEE-TTEEEEC------------------CTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETT
T ss_pred CCcEEE-CCEEEEE------------------cCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECC
Confidence 222333 6788883 3356799999887876543221100 0 11112 244
Q ss_pred EEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCcccc
Q 023085 147 YVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFS 226 (287)
Q Consensus 147 ~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (287)
.+|+... .+.|++++..+++.. +.... +....++.+ +++||+++..
T Consensus 241 ~v~~~~~-~g~l~~~d~~tG~~~----w~~~~-~~~~~~~~~-~~~l~~~~~~--------------------------- 286 (376)
T 3q7m_A 241 VVFALAY-NGNLTALDLRSGQIM----WKREL-GSVNDFIVD-GNRIYLVDQN--------------------------- 286 (376)
T ss_dssp EEEEECT-TSCEEEEETTTCCEE----EEECC-CCEEEEEEE-TTEEEEEETT---------------------------
T ss_pred EEEEEec-CcEEEEEECCCCcEE----eeccC-CCCCCceEE-CCEEEEEcCC---------------------------
Confidence 5888763 567999997543211 11111 123345554 6789999875
Q ss_pred ccccCCCceEEEEECCC-CcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEeC
Q 023085 227 QFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 227 ~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 286 (287)
+.|+.+|++ |+.++....... .........+++||+++.. +.|.++|.
T Consensus 287 --------g~l~~~d~~tG~~~w~~~~~~~---~~~~~~~~~~~~l~v~~~~-g~l~~~d~ 335 (376)
T 3q7m_A 287 --------DRVMALTIDGGVTLWTQSDLLH---RLLTSPVLYNGNLVVGDSE-GYLHWINV 335 (376)
T ss_dssp --------CCEEEEETTTCCEEEEECTTTT---SCCCCCEEETTEEEEECTT-SEEEEEET
T ss_pred --------CeEEEEECCCCcEEEeecccCC---CcccCCEEECCEEEEEeCC-CeEEEEEC
Confidence 578999974 777777653222 1233444568999999864 46777664
No 109
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.04 E-value=8.2e-09 Score=91.72 Aligned_cols=176 Identities=15% Similarity=0.181 Sum_probs=106.2
Q ss_pred ccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee---ccc------cccceEEEccC-
Q 023085 75 LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA---DGF------YFANGVALSRD- 144 (287)
Q Consensus 75 ~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~------~~~~~i~~~~~- 144 (287)
+..|.+|+++++|+|||++.. .+.|+++++.+++...+. ... ..+.+++++|+
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~-----------------gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf 88 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERA-----------------TGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDF 88 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETT-----------------TCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTT
T ss_pred CCCceEEEEcCCCcEEEEEcC-----------------CCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCc
Confidence 467899999999999997422 246999987656554432 111 23348999997
Q ss_pred --CCEEEEEeCC------------CCEEEEEEecCC--CCcceeEEeccCC----CCCcceeeCCCCCEEEEEeccchhH
Q 023085 145 --EDYVVVCESW------------KFRCRKYWLKGE--RKGKLETFAENLP----GAPDNINLAPDGTFWIAIIKLDARR 204 (287)
Q Consensus 145 --~~~l~v~~~~------------~~~l~~~~~~~~--~~~~~~~~~~~~~----~~~~~i~~d~~G~lwv~~~~~~~~~ 204 (287)
++.||++.+. ..+|.+++.+.. ++...+.+....+ ..+.+|++++||+||++.....+..
T Consensus 89 ~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~ 168 (454)
T 1cru_A 89 KNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQ 168 (454)
T ss_dssp TTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTS
T ss_pred CcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCC
Confidence 7789999863 357999987642 2223333332111 2467899999999999986532110
Q ss_pred HHHhhc------chhHHHHHHhCCccccccccCCCceEEEEECCCCc-----------EEEEEECCCCccccceEEEEEe
Q 023085 205 MKILNS------SKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGT-----------IIRNLVDPTGQLMSFVTSGLQV 267 (287)
Q Consensus 205 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~~~~ 267 (287)
....+. .|.......+. .....++|.|++++|+ ..+.+.. | ..++..++++
T Consensus 169 ~~~~~~~~~~~~~p~~~~~~aq~--------~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~--G--~RNp~gla~d 236 (454)
T 1cru_A 169 LAYLFLPNQAQHTPTQQELNGKD--------YHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTL--G--HRNPQGLAFT 236 (454)
T ss_dssp GGGTTSCCCTTCCCCHHHHHTTC--------CTTCSSEEEEECTTSCCCTTCCEETTEECSEEEB--C--CSEEEEEEEC
T ss_pred ccccccccccccccccccccccC--------CCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEE--C--CCCcceEEEC
Confidence 000000 00000000000 0112579999999987 3344442 3 3467888887
Q ss_pred -CCEEEEEecCCC
Q 023085 268 -DNHLYVISLTSN 279 (287)
Q Consensus 268 -~g~l~i~~~~~~ 279 (287)
+|+||++....+
T Consensus 237 p~G~L~~~d~g~~ 249 (454)
T 1cru_A 237 PNGKLLQSEQGPN 249 (454)
T ss_dssp TTSCEEEEEECSS
T ss_pred CCCCEEEEecCCC
Confidence 699999997543
No 110
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.03 E-value=1.5e-07 Score=79.64 Aligned_cols=153 Identities=11% Similarity=0.033 Sum_probs=89.7
Q ss_pred CCCCcEEEEe-cCCeEEEEE--CCceEEEEeeCC--ccccCeEECCCCc-EEEEeCC-CceEEEc-cCC-cEEEeeecC-
Q 023085 2 DKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDS--QTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG-VENFLSYVN- 71 (287)
Q Consensus 2 d~~G~l~~~~-~~g~i~~~~--~~~~~~~~~~~~--~~~~~i~~d~dg~-l~v~~~~-~gi~~~~-~~g-~~~~~~~~~- 71 (287)
..++.+|++. .++.|..++ +++......... .+. .++++++|+ +|++... ..|.+++ .++ .........
T Consensus 8 ~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~ 86 (349)
T 1jmx_B 8 KAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPG-TAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSV 86 (349)
T ss_dssp CTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSC-EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCS
T ss_pred cCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCc-eeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccc
Confidence 4567777765 788999999 555544433333 466 899999996 7777644 4588898 666 332222111
Q ss_pred -CccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE---eeccccccceEEEccCCC
Q 023085 72 -GSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL---VADGFYFANGVALSRDED 146 (287)
Q Consensus 72 -~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~ 146 (287)
......|.+++++++|. ++++..........+ ....+.|+.+|..+++... .......+.+++++|+++
T Consensus 87 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~------~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 87 PGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY------VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS 160 (349)
T ss_dssp TTEEEECSSCEEECTTSSEEEEEEEEEEECSSCE------EECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC
T ss_pred cccccccccceEECCCCCEEEEEccccccccccc------ccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc
Confidence 00123478899999986 555431100000000 0113578889877643221 111222467788999999
Q ss_pred EEEEEeCCCCEEEEEEecC
Q 023085 147 YVVVCESWKFRCRKYWLKG 165 (287)
Q Consensus 147 ~l~v~~~~~~~l~~~~~~~ 165 (287)
+|+.. ..|+.+|...
T Consensus 161 -l~~~~---~~i~~~d~~~ 175 (349)
T 1jmx_B 161 -LYVAG---PDIYKMDVKT 175 (349)
T ss_dssp -EEEES---SSEEEECTTT
T ss_pred -EEEcc---CcEEEEeCCC
Confidence 88853 3388888654
No 111
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.00 E-value=9.4e-07 Score=73.88 Aligned_cols=173 Identities=13% Similarity=0.171 Sum_probs=104.8
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEe-CCCceEEEc-cCC--cEEEeeecCCcc
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICD-NANGLHKVS-EDG--VENFLSYVNGSK 74 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~-~~~gi~~~~-~~g--~~~~~~~~~~~~ 74 (287)
.++|. |..++.+|.|..|+ +++..........+...+++.+++++.++. ....|..++ .++ ...+...
T Consensus 32 s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~----- 106 (312)
T 4ery_A 32 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH----- 106 (312)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECC-----
T ss_pred CCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCC-----
Confidence 45664 55666888888888 555544333322333378899999766654 334577777 555 3333211
Q ss_pred ccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-eeccccccceEEEccCCCEEEEEeC
Q 023085 75 LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFYFANGVALSRDEDYVVVCES 153 (287)
Q Consensus 75 ~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~l~v~~~ 153 (287)
...+..+++.+++.++++. ...+.|..+|..+++... +.........++++|+++.++.+.
T Consensus 107 ~~~v~~~~~~~~~~~l~s~-----------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~- 168 (312)
T 4ery_A 107 SNYVFCCNFNPQSNLIVSG-----------------SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS- 168 (312)
T ss_dssp SSCEEEEEECSSSSEEEEE-----------------ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-
T ss_pred CCCEEEEEEcCCCCEEEEE-----------------eCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEe-
Confidence 2356788899998877752 235678888887665433 333333456788999998666555
Q ss_pred CCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 154 WKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
..+.|..||+...+ ....+..........++++++|++.++...
T Consensus 169 ~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 212 (312)
T 4ery_A 169 YDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATL 212 (312)
T ss_dssp TTSCEEEEETTTCC--EEEEECCSSCCCEEEEEECTTSSEEEEEET
T ss_pred CCCcEEEEECCCCc--eeeEEeccCCCceEEEEECCCCCEEEEEcC
Confidence 46779999875422 122222111222455788999876666544
No 112
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.99 E-value=1.6e-07 Score=79.43 Aligned_cols=139 Identities=20% Similarity=0.146 Sum_probs=91.8
Q ss_pred CeEECCCCcEEEEeCC-CceEEEc-cCC-cEEEeeecCCccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCC
Q 023085 37 GLTSTKEGHLIICDNA-NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKP 112 (287)
Q Consensus 37 ~i~~d~dg~l~v~~~~-~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~ 112 (287)
++++.+++++|++... +.|.++| .++ ........ ....|..++++++|. +|++. ..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~~~v~~-----------------~~ 63 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMP---DKFGPGTAMMAPDNRTAYVLN-----------------NH 63 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECS---SCCSSCEEEECTTSSEEEEEE-----------------TT
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecC---CCCCCceeEECCCCCEEEEEe-----------------CC
Confidence 6677788888888644 5688898 666 33222211 111477899999986 77753 23
Q ss_pred CceEEEEeCCCCeeEEeecc-------ccccceEEEccCCCEEEEEeCC-----------CCEEEEEEecCCCCcc-eeE
Q 023085 113 HGQLLKYDPSSNITTLVADG-------FYFANGVALSRDEDYVVVCESW-----------KFRCRKYWLKGERKGK-LET 173 (287)
Q Consensus 113 ~~~v~~~~~~~~~~~~~~~~-------~~~~~~i~~~~~~~~l~v~~~~-----------~~~l~~~~~~~~~~~~-~~~ 173 (287)
.+.|+.+|+.+++....... ...+.+++++|+++.+|++... .+.|..+|+++.+..+ ...
T Consensus 64 ~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 143 (349)
T 1jmx_B 64 YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT 143 (349)
T ss_dssp TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEE
T ss_pred CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeee
Confidence 56799999987775433221 2337899999999999998844 4789999986532222 122
Q ss_pred EeccCCCCCcceeeCCCCCEEEEE
Q 023085 174 FAENLPGAPDNINLAPDGTFWIAI 197 (287)
Q Consensus 174 ~~~~~~~~~~~i~~d~~G~lwv~~ 197 (287)
+. .+..+.+++++++|++|++.
T Consensus 144 ~~--~~~~~~~~~~s~dg~l~~~~ 165 (349)
T 1jmx_B 144 FP--MPRQVYLMRAADDGSLYVAG 165 (349)
T ss_dssp EE--CCSSCCCEEECTTSCEEEES
T ss_pred cc--CCCcccceeECCCCcEEEcc
Confidence 21 22347778899999988853
No 113
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.98 E-value=6.4e-07 Score=78.58 Aligned_cols=159 Identities=17% Similarity=0.161 Sum_probs=98.4
Q ss_pred CeEEEEE-CC-ceEEEEeeCCccccCeEECCCCc-EEEEeCCC---ceEEEc-cCC-cEEEeeecCCccccccceEEEcC
Q 023085 14 GWIKRLQ-DG-TWVNWKFIDSQTLVGLTSTKEGH-LIICDNAN---GLHKVS-EDG-VENFLSYVNGSKLRFANDVVEAS 85 (287)
Q Consensus 14 g~i~~~~-~~-~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~~---gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~ 85 (287)
+.|..++ ++ ....+........ .+++.|||+ |..+.... .|+.++ .++ ...+... ...+..+++.+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~-~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~-----~~~~~~~~~sp 232 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLM-SPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF-----PRHNGAPAFSP 232 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEE-EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECC-----SSCEEEEEECT
T ss_pred ceEEEEcCCCCCCEEEeCCCCcce-eeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecC-----CCcccCEEEcC
Confidence 6788888 43 4444444444445 889999996 44444332 588888 677 5544322 12567889999
Q ss_pred CCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCC--CEEEEEE
Q 023085 86 DGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK--FRCRKYW 162 (287)
Q Consensus 86 ~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~--~~l~~~~ 162 (287)
+|. |.++... .....|+.+|..+++...+.........++|+|||+.|+++.... ..|+.++
T Consensus 233 dg~~la~~~~~---------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 233 DGSKLAFALSK---------------TGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp TSSEEEEEECT---------------TSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCEEEEEEec---------------CCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 997 4444211 123469999998787766554444556788999999888776433 3788888
Q ss_pred ecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEE
Q 023085 163 LKGERKGKLETFAENLPGAPDNINLAPDGTFWIAI 197 (287)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~ 197 (287)
.++.+. ..+. ........++++++|+..+.+
T Consensus 298 ~~~~~~---~~l~-~~~~~~~~~~~spdG~~l~~~ 328 (415)
T 2hqs_A 298 INGGAP---QRIT-WEGSQNQDADVSSDGKFMVMV 328 (415)
T ss_dssp TTSSCC---EECC-CSSSEEEEEEECTTSSEEEEE
T ss_pred CCCCCE---EEEe-cCCCcccCeEECCCCCEEEEE
Confidence 765321 1111 112234567889999744443
No 114
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.98 E-value=4.7e-07 Score=78.04 Aligned_cols=217 Identities=16% Similarity=0.163 Sum_probs=124.0
Q ss_pred CCcEEEEecCCeEEEEE--CCceEEEEeeCCcc-----ccCeEECCCCcEEEEeCCCceEEEc-cCC-c-EEEeeec-CC
Q 023085 4 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQT-----LVGLTSTKEGHLIICDNANGLHKVS-EDG-V-ENFLSYV-NG 72 (287)
Q Consensus 4 ~G~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~-----~~~i~~d~dg~l~v~~~~~gi~~~~-~~g-~-~~~~~~~-~~ 72 (287)
+|.+|+++.++.|+.++ +|+........... ....+++ ++.+|+++....++.++ .+| . ....... .+
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~ 221 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATG 221 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TTEEEECCTTTEEEEEETTTCCEEEEEECCC---
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCC
Confidence 57899999999999999 67654333222111 1133344 67899987666799999 677 2 2221110 00
Q ss_pred c----cccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEE
Q 023085 73 S----KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYV 148 (287)
Q Consensus 73 ~----~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 148 (287)
. .+..+....+..++.+|++. ..+.|+.+|+++|+...... ......++. +++.+
T Consensus 222 ~~~~~~~~~~~~~p~~~~~~v~~~~------------------~~g~l~~~d~~tG~~~w~~~-~~~~~~~~~--~~~~l 280 (376)
T 3q7m_A 222 STEIDRLSDVDTTPVVVNGVVFALA------------------YNGNLTALDLRSGQIMWKRE-LGSVNDFIV--DGNRI 280 (376)
T ss_dssp --------CCCCCCEEETTEEEEEC------------------TTSCEEEEETTTCCEEEEEC-CCCEEEEEE--ETTEE
T ss_pred CcccccccccCCCcEEECCEEEEEe------------------cCcEEEEEECCCCcEEeecc-CCCCCCceE--ECCEE
Confidence 0 00001111112357888852 34679999998887654332 222333443 35569
Q ss_pred EEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCcccccc
Q 023085 149 VVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQF 228 (287)
Q Consensus 149 ~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
|+... .+.|+++|.++++.. ..............++. ++.||+++..
T Consensus 281 ~~~~~-~g~l~~~d~~tG~~~--w~~~~~~~~~~~~~~~~-~~~l~v~~~~----------------------------- 327 (376)
T 3q7m_A 281 YLVDQ-NDRVMALTIDGGVTL--WTQSDLLHRLLTSPVLY-NGNLVVGDSE----------------------------- 327 (376)
T ss_dssp EEEET-TCCEEEEETTTCCEE--EEECTTTTSCCCCCEEE-TTEEEEECTT-----------------------------
T ss_pred EEEcC-CCeEEEEECCCCcEE--EeecccCCCcccCCEEE-CCEEEEEeCC-----------------------------
Confidence 98875 467999997643211 11110011112233333 5789999875
Q ss_pred ccCCCceEEEEECCC-CcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEe
Q 023085 229 ITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 285 (287)
Q Consensus 229 ~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 285 (287)
+.|+.+|++ |+.++.+....+. ........+++||+++.. +.|..++
T Consensus 328 ------g~l~~~d~~tG~~~~~~~~~~~~---~~~~~~~~~~~l~v~~~~-G~l~~~~ 375 (376)
T 3q7m_A 328 ------GYLHWINVEDGRFVAQQKVDSSG---FQTEPVAADGKLLIQAKD-GTVYSIT 375 (376)
T ss_dssp ------SEEEEEETTTCCEEEEEECCTTC---BCSCCEEETTEEEEEBTT-SCEEEEE
T ss_pred ------CeEEEEECCCCcEEEEEecCCCc---ceeCCEEECCEEEEEeCC-CEEEEEe
Confidence 589999964 8888877753322 223344468999999875 4566654
No 115
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.98 E-value=1.1e-06 Score=75.99 Aligned_cols=249 Identities=11% Similarity=0.025 Sum_probs=129.9
Q ss_pred CCC-cEEEEec-----CCeEEEEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeC----------CCceEEEc-cCC
Q 023085 3 KNG-VIYTATR-----DGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDN----------ANGLHKVS-EDG 62 (287)
Q Consensus 3 ~~G-~l~~~~~-----~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~----------~~gi~~~~-~~g 62 (287)
++| .+|+.+. .+.|..+| +++..........| ++++++||+ ||+++. ...|.++| .++
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~ 119 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL 119 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 456 7999985 57899999 55555444445555 499999994 899873 13488899 565
Q ss_pred --cEEEeeecCC---ccccccceEEEcCCCc-EEEEcCCC--C---CCCccee--ee----------------eeccCCC
Q 023085 63 --VENFLSYVNG---SKLRFANDVVEASDGS-LYFTVSSS--K---YLPHEYC--LD----------------ILEGKPH 113 (287)
Q Consensus 63 --~~~~~~~~~~---~~~~~~~~l~~d~~g~-l~v~~~~~--~---~~~~~~~--~~----------------~~~~~~~ 113 (287)
...+. ...+ .....|..++++++|+ +|+++... . .+..... .. +.....+
T Consensus 120 ~v~~~I~-v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~D 198 (386)
T 3sjl_D 120 LPTADIE-LPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRD 198 (386)
T ss_dssp CEEEEEE-ETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETT
T ss_pred eEEEEEE-CCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCC
Confidence 33332 1111 1124788999999985 89986421 0 0111000 00 0011123
Q ss_pred ceEEEEeCCC-CeeEEeecccc----cc--ceEEEc-cCCCEEEEEeCCCCEEEEEEecCCCCcceeE---Eec------
Q 023085 114 GQLLKYDPSS-NITTLVADGFY----FA--NGVALS-RDEDYVVVCESWKFRCRKYWLKGERKGKLET---FAE------ 176 (287)
Q Consensus 114 ~~v~~~~~~~-~~~~~~~~~~~----~~--~~i~~~-~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~---~~~------ 176 (287)
+.+..++..+ +++........ .+ +...++ ++|+.+|++. ++.++.+|..++...-... +..
T Consensus 199 G~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~--~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g 276 (386)
T 3sjl_D 199 GSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY--TGKIHQIDLSSGDAKFLPAVEALTEAERADG 276 (386)
T ss_dssp SCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT--TSEEEEEECTTSSCEECCCEESSCHHHHHTT
T ss_pred CCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeC--CCEEEEEECCCCcceeecceecccccccccc
Confidence 4444455433 33311100000 01 112333 4565445443 4567777765432111111 100
Q ss_pred cCCCCCcceeeCCCC-CEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCC
Q 023085 177 NLPGAPDNINLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPT 254 (287)
Q Consensus 177 ~~~~~~~~i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~ 254 (287)
..++....+++++++ ++|++..... ...+..+...|..+|.+ ++.+..+....
T Consensus 277 ~~p~g~q~~a~~~~~~~lyV~~~~~~-------------------------~~~hk~~~~~V~viD~~t~kv~~~i~vg~ 331 (386)
T 3sjl_D 277 WRPGGWQQVAYHRALDRIYLLVDQRD-------------------------EWRHKTASRFVVVLDAKTGERLAKFEMGH 331 (386)
T ss_dssp EEECSSSCEEEETTTTEEEEEEEECC-------------------------TTCTTSCEEEEEEEETTTCCEEEEEEEEE
T ss_pred ccCCCcceeeECCCCCeEEEEecccc-------------------------ccccCCCCCEEEEEECCCCeEEEEEECCC
Confidence 011122337777654 6888765310 00001123578999975 66777776532
Q ss_pred CccccceEEEEEe-CC--EEEEEecCCCeEEEEeC
Q 023085 255 GQLMSFVTSGLQV-DN--HLYVISLTSNFIGKVQL 286 (287)
Q Consensus 255 ~~~~~~~~~~~~~-~g--~l~i~~~~~~~i~~~~~ 286 (287)
.+.++.+. ++ +||+++..++.|.++|.
T Consensus 332 -----~~~~lavs~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 332 -----EIDSINVSQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp -----EECEEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred -----CcceEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 34455553 43 68888888999999986
No 116
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.97 E-value=1.2e-07 Score=77.18 Aligned_cols=140 Identities=21% Similarity=0.238 Sum_probs=94.6
Q ss_pred CCcEEEEe-cCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCCCceEEEc-cCC--cEEEeeecCCccccc
Q 023085 4 NGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLSYVNGSKLRF 77 (287)
Q Consensus 4 ~G~l~~~~-~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g--~~~~~~~~~~~~~~~ 77 (287)
.+.||+.+ .++.++.|| +.+..........++ +++.| .++||+++....|+.+| .+. ...+.-...+.+...
T Consensus 96 g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~-glt~d-g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~ 173 (262)
T 3nol_A 96 KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGW-GLTHN-DQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPE 173 (262)
T ss_dssp TTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCC-CEEEC-SSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCC
T ss_pred CCEEEEEEeeCCEEEEEECccCcEEEEEECCCCce-EEecC-CCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccc
Confidence 35899999 578889999 444433333344556 66655 24799998656799999 555 444433334455566
Q ss_pred cceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeec--c-----------ccccceEEEccC
Q 023085 78 ANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--G-----------FYFANGVALSRD 144 (287)
Q Consensus 78 ~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~-----------~~~~~~i~~~~~ 144 (287)
++.+... +|.||+.... ...|.++|++++++..... . ..-+||||++|+
T Consensus 174 lNELe~~-~G~lyan~w~-----------------~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~ 235 (262)
T 3nol_A 174 LNELEWV-DGEIFANVWQ-----------------TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKE 235 (262)
T ss_dssp EEEEEEE-TTEEEEEETT-----------------SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETT
T ss_pred cceeEEE-CCEEEEEEcc-----------------CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCC
Confidence 7777766 7899996422 4589999999998754321 1 135699999999
Q ss_pred CCEEEEEeCCCCEEEEEEe
Q 023085 145 EDYVVVCESWKFRCRKYWL 163 (287)
Q Consensus 145 ~~~l~v~~~~~~~l~~~~~ 163 (287)
++.|||+.-.=.+++.+.+
T Consensus 236 ~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 236 HHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp TTEEEEEETTCSEEEEEEE
T ss_pred CCEEEEECCCCCceEEEEE
Confidence 9999999754456666554
No 117
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.97 E-value=2.6e-07 Score=79.43 Aligned_cols=186 Identities=12% Similarity=0.013 Sum_probs=120.1
Q ss_pred CeEECCCCcEEEEeCCC----------------ceEEEc-c-C--C-cEEEee-ecCCccccccceEEEc-C-------C
Q 023085 37 GLTSTKEGHLIICDNAN----------------GLHKVS-E-D--G-VENFLS-YVNGSKLRFANDVVEA-S-------D 86 (287)
Q Consensus 37 ~i~~d~dg~l~v~~~~~----------------gi~~~~-~-~--g-~~~~~~-~~~~~~~~~~~~l~~d-~-------~ 86 (287)
.+.+|+.|+|||.+.+. .|+.+| . + . +..+.- .....+....+++++| . +
T Consensus 91 ~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~ 170 (381)
T 3q6k_A 91 QPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSE 170 (381)
T ss_dssp EEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCS
T ss_pred EEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCc
Confidence 78899999999998551 277888 4 4 4 333321 1111223467889999 2 4
Q ss_pred CcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccc-------------------cccceEEEccC---
Q 023085 87 GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-------------------YFANGVALSRD--- 144 (287)
Q Consensus 87 g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-------------------~~~~~i~~~~~--- 144 (287)
+.+||+|.. ..+|..+|..+++-.++.+.. ....||+++|+
T Consensus 171 ~~aYItD~~-----------------~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~ 233 (381)
T 3q6k_A 171 TFVYITNFL-----------------RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSE 233 (381)
T ss_dssp EEEEEEETT-----------------TTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTT
T ss_pred cEEEEEcCC-----------------CCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCC
Confidence 568998754 346777777666544443210 13457899998
Q ss_pred -CCEEEEEeCCCCEEEEEEec---CCCC-cceeEEeccCCCCCc--ceeeC-CCCCEEEEEeccchhHHHHhhcchhHHH
Q 023085 145 -EDYVVVCESWKFRCRKYWLK---GERK-GKLETFAENLPGAPD--NINLA-PDGTFWIAIIKLDARRMKILNSSKLIKH 216 (287)
Q Consensus 145 -~~~l~v~~~~~~~l~~~~~~---~~~~-~~~~~~~~~~~~~~~--~i~~d-~~G~lwv~~~~~~~~~~~~~~~~~~~~~ 216 (287)
++.||+....+.+++++..+ .+.. ...+.+. ......+ ++++| ++|+||++...
T Consensus 234 ~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G-~kg~~s~~~~~~~D~~~G~ly~~~~~----------------- 295 (381)
T 3q6k_A 234 GNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLG-NRGKYNDAIALAYDPKTKVIFFAEAN----------------- 295 (381)
T ss_dssp SCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEE-ECCTTCCEEEEEECTTTCEEEEEESS-----------------
T ss_pred CCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEee-ecCCCCCcceEEEeCCCCeEEEEecc-----------------
Confidence 88999999888899998743 2222 2222222 2221123 46786 79999999987
Q ss_pred HHHhCCccccccccCCCceEEEEECCCC-cE-----EEEEECCCCccccceEEEEEe-CCEEEEEecC
Q 023085 217 VLAAYPKLFSQFITLGGGAHLIHVAEDG-TI-----IRNLVDPTGQLMSFVTSGLQV-DNHLYVISLT 277 (287)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~v~~~~~~g-~~-----~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~ 277 (287)
..+|.+.++++ .. ......+ .+..+..+..+ +|.||+.+..
T Consensus 296 -----------------~~aI~~w~~~~~~~~~~n~~~l~~d~---~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 296 -----------------TKQVSCWNTQKMPLRMKNTDVVYTSS---RFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp -----------------SSEEEEEETTSCSBCGGGEEEEEECT---TCCSEEEEEECTTSCEEEEECS
T ss_pred -----------------CCeEEEEeCCCCccccCceEEEEECC---CccccCeEEECCCCeEEEEECc
Confidence 46899999887 22 3334443 35678888886 7999998753
No 118
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.97 E-value=3.4e-07 Score=73.77 Aligned_cols=153 Identities=15% Similarity=0.142 Sum_probs=105.5
Q ss_pred cccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeec--cccccceEEEccCCCEEEEEeC
Q 023085 76 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--GFYFANGVALSRDEDYVVVCES 153 (287)
Q Consensus 76 ~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~l~v~~~ 153 (287)
.+..++.++. ++||++... .+.+.|.++|++++++..... ...+..|+++ +++.||+...
T Consensus 21 ~ftqGL~~~~-~~LyestG~---------------~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~--~~~~ly~ltw 82 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGE---------------TGRSSVRKVDLETGRILQRAEVPPPYFGAGIVA--WRDRLIQLTW 82 (243)
T ss_dssp CCEEEEEEET-TEEEEEECC---------------TTSCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEES
T ss_pred cccccEEEEC-CEEEEECCC---------------CCCceEEEEECCCCCEEEEEeCCCCcceeEEEE--eCCEEEEEEe
Confidence 4566888885 899997422 124579999999998765432 2234456655 4678999999
Q ss_pred CCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCC
Q 023085 154 WKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGG 233 (287)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
.++.+++||.++. .....+. .++.+-+++.| .++||++...
T Consensus 83 ~~~~v~v~D~~tl--~~~~ti~--~~~~Gwglt~d-g~~L~vSdgs---------------------------------- 123 (243)
T 3mbr_X 83 RNHEGFVYDLATL--TPRARFR--YPGEGWALTSD-DSHLYMSDGT---------------------------------- 123 (243)
T ss_dssp SSSEEEEEETTTT--EEEEEEE--CSSCCCEEEEC-SSCEEEECSS----------------------------------
T ss_pred eCCEEEEEECCcC--cEEEEEe--CCCCceEEeeC-CCEEEEECCC----------------------------------
Confidence 9999999997542 2222332 22335566655 3579998754
Q ss_pred ceEEEEECCC-CcEEEEEECC-CCccccceEEEEEeCCEEEEEecCCCeEEEEeC
Q 023085 234 GAHLIHVAED-GTIIRNLVDP-TGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 234 ~~~v~~~~~~-g~~~~~~~~~-~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 286 (287)
+.|..+||+ .+.+..+... ++..+..+..+...+|+||+....++.|.++|.
T Consensus 124 -~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp 177 (243)
T 3mbr_X 124 -AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDP 177 (243)
T ss_dssp -SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECT
T ss_pred -CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEEC
Confidence 489999987 4666666552 344455566666679999999999999999985
No 119
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.96 E-value=2.7e-06 Score=71.31 Aligned_cols=218 Identities=11% Similarity=0.041 Sum_probs=133.4
Q ss_pred CCCC-cEEEEecCCeEEEEE--CCceEEE--Ee-eCCccccCeEECCCCcE-EEEeCCCceEEEc-cCC--cEEEeeecC
Q 023085 2 DKNG-VIYTATRDGWIKRLQ--DGTWVNW--KF-IDSQTLVGLTSTKEGHL-IICDNANGLHKVS-EDG--VENFLSYVN 71 (287)
Q Consensus 2 d~~G-~l~~~~~~g~i~~~~--~~~~~~~--~~-~~~~~~~~i~~d~dg~l-~v~~~~~gi~~~~-~~g--~~~~~~~~~ 71 (287)
.++| .|.+++.++.|..|+ +++.... .. ...... .+++.+++++ +++...+.|..++ .++ ...+..
T Consensus 106 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~--- 181 (337)
T 1gxr_A 106 LPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG--- 181 (337)
T ss_dssp CTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC---
T ss_pred cCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceE-EEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec---
Confidence 3556 467777889999998 4432121 12 222334 7888999965 4445445688888 666 333311
Q ss_pred CccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEE
Q 023085 72 GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVC 151 (287)
Q Consensus 72 ~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~ 151 (287)
....+..+++.+++..+++ ....+.|..+|..+++.............++++|+++.++++
T Consensus 182 --~~~~i~~~~~~~~~~~l~~-----------------~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 242 (337)
T 1gxr_A 182 --HTDGASCIDISNDGTKLWT-----------------GGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVG 242 (337)
T ss_dssp --CSSCEEEEEECTTSSEEEE-----------------EETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred --ccCceEEEEECCCCCEEEE-----------------EecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEE
Confidence 1235778999999876664 223568889998877654443333456778899999977776
Q ss_pred eCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccC
Q 023085 152 ESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 231 (287)
Q Consensus 152 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
.. .+.|..|+..... ...+. .....+..+++.++|++.++...
T Consensus 243 ~~-~~~i~~~~~~~~~---~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-------------------------------- 285 (337)
T 1gxr_A 243 ME-SSNVEVLHVNKPD---KYQLH-LHESCVLSLKFAYCGKWFVSTGK-------------------------------- 285 (337)
T ss_dssp ET-TSCEEEEETTSSC---EEEEC-CCSSCEEEEEECTTSSEEEEEET--------------------------------
T ss_pred cC-CCcEEEEECCCCC---eEEEc-CCccceeEEEECCCCCEEEEecC--------------------------------
Confidence 54 5679999976432 11221 22234677889999986666654
Q ss_pred CCceEEEEECCC-CcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 232 GGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 232 ~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|..++.+ ++.+..... . ..+..+... ++++.+.....+.|.++++
T Consensus 286 --dg~i~~~~~~~~~~~~~~~~-~----~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 286 --DNLLNAWRTPYGASIFQSKE-S----SSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp --TSEEEEEETTTCCEEEEEEC-S----SCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred --CCcEEEEECCCCeEEEEecC-C----CcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 3567777754 555544332 1 245666664 4555455556667777764
No 120
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.96 E-value=5.6e-07 Score=73.83 Aligned_cols=166 Identities=13% Similarity=0.084 Sum_probs=99.4
Q ss_pred cCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCCCceEEEc-cC-C-cEEEeeecCCccccccceEEEcCC
Q 023085 12 RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-ED-G-VENFLSYVNGSKLRFANDVVEASD 86 (287)
Q Consensus 12 ~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~-g-~~~~~~~~~~~~~~~~~~l~~d~~ 86 (287)
.++.|+.++ +++...+........ .+++.++|+.++......|++++ .+ + ...+... .....+.++++.++
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v~-~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~spd 95 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELFE-APNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTG---FATICNNDHGISPD 95 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCCE-EEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCT---TCCCBCSCCEECTT
T ss_pred cceeEEEEeCCCCceeeeccCCcceE-eeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccc---cccccccceEECCC
Confidence 456788888 556555555444555 88999999866555456789998 67 6 5443221 11245678899999
Q ss_pred CcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCC
Q 023085 87 GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGE 166 (287)
Q Consensus 87 g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~ 166 (287)
|..+++... .......|+.++..+++...+... .....++++|+++.++++....+.+..|+++..
T Consensus 96 g~~l~~~~~-------------~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~ 161 (297)
T 2ojh_A 96 GALYAISDK-------------VEFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDID 161 (297)
T ss_dssp SSEEEEEEC-------------TTTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred CCEEEEEEe-------------CCCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECC
Confidence 976553211 011246799998876665544332 235677899999988766544554444443311
Q ss_pred CCcceeEEeccCCCCCcceeeCCCCC-EEEEE
Q 023085 167 RKGKLETFAENLPGAPDNINLAPDGT-FWIAI 197 (287)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~i~~d~~G~-lwv~~ 197 (287)
. .....+. .....+..++++++|+ |+++.
T Consensus 162 ~-~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 162 S-GVETRLT-HGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp T-CCEEECC-CSSSCEEEEEECTTSSEEEEEE
T ss_pred C-CcceEcc-cCCCccccceECCCCCEEEEEe
Confidence 1 1122222 2223456788899987 44444
No 121
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.92 E-value=8.1e-08 Score=85.28 Aligned_cols=166 Identities=10% Similarity=0.059 Sum_probs=100.8
Q ss_pred EEEEeeCCccccCeEECCCCcEEEEeCCCc-eEEEc-cCC-cEEEeeecCCc----cccccceEEEcC----CCcEEEEc
Q 023085 25 VNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG-VENFLSYVNGS----KLRFANDVVEAS----DGSLYFTV 93 (287)
Q Consensus 25 ~~~~~~~~~~~~~i~~d~dg~l~v~~~~~g-i~~~~-~~g-~~~~~~~~~~~----~~~~~~~l~~d~----~g~l~v~~ 93 (287)
+.+......|+ +|+++++|+|||++...+ |++++ .+| .+.+....... ....+.+|++++ ++.||++.
T Consensus 20 ~~~a~~l~~P~-~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 20 KVILSNLNKPH-ALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp EEEECCCSSEE-EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred EEEECCCCCce-EEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 34444456788 999999999999997654 99998 557 65554322111 124566899998 68999975
Q ss_pred CCCCCCCcceeeeeeccCCCceEEEEeCCC--Cee---EEeec-----cccccceEEEccCCCEEEEEeCC---------
Q 023085 94 SSSKYLPHEYCLDILEGKPHGQLLKYDPSS--NIT---TLVAD-----GFYFANGVALSRDEDYVVVCESW--------- 154 (287)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~---~~~~~-----~~~~~~~i~~~~~~~~l~v~~~~--------- 154 (287)
+........ . .......|+|++.+. +.+ +.+.. ....+++|+|+|||. ||++.-.
T Consensus 99 s~~~~~~~~---~--~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~Gd~~~~~~~~~ 172 (454)
T 1cru_A 99 TFKNPKSTD---K--ELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIGDQGRNQLAYL 172 (454)
T ss_dssp EEECTTC-----C--CSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEECCTTTTSGGGT
T ss_pred eccccCCCc---c--ccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEECCCCCCCcccc
Confidence 320000000 0 000024677776432 222 12211 123568899999997 9998421
Q ss_pred -----------------------CCEEEEEEecCCCCc---------ceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 155 -----------------------KFRCRKYWLKGERKG---------KLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 155 -----------------------~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
.++|+|++.++. +. ..+.+.... -.|.++++|++|.||++...
T Consensus 173 ~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~-ip~~Npf~~~~~~ei~a~G~-RNp~gla~dp~G~L~~~d~g 247 (454)
T 1cru_A 173 FLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGS-IPKDNPSFNGVVSHIYTLGH-RNPQGLAFTPNGKLLQSEQG 247 (454)
T ss_dssp TSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSC-CCTTCCEETTEECSEEEBCC-SEEEEEEECTTSCEEEEEEC
T ss_pred ccccccccccccccccccCCCCCCeeEEEEeCCCC-CCCCCCCCCCCcceEEEECC-CCcceEEECCCCCEEEEecC
Confidence 367999987652 11 223343211 24889999999999999986
No 122
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.92 E-value=6.4e-07 Score=81.72 Aligned_cols=229 Identities=14% Similarity=0.077 Sum_probs=136.2
Q ss_pred CCCC-cEEEEecCCeEEEEE-C-Cc--eEEEEeeCCccccCeEEC----CCC-cEEEEeCC-CceEEEc-cCC--cEEEe
Q 023085 2 DKNG-VIYTATRDGWIKRLQ-D-GT--WVNWKFIDSQTLVGLTST----KEG-HLIICDNA-NGLHKVS-EDG--VENFL 67 (287)
Q Consensus 2 d~~G-~l~~~~~~g~i~~~~-~-~~--~~~~~~~~~~~~~~i~~d----~dg-~l~v~~~~-~gi~~~~-~~g--~~~~~ 67 (287)
++|| .+|+++.++.|..++ . .. ..........|. +++++ +|| .+|+++.. ..+.++| .+. +..+.
T Consensus 205 SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~-~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 205 SASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR-SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp CTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE-EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc-eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 5677 589998889999999 3 22 222233345677 99999 699 58888655 5688888 555 33332
Q ss_pred eec---CC---ccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe--eccccccceE
Q 023085 68 SYV---NG---SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV--ADGFYFANGV 139 (287)
Q Consensus 68 ~~~---~~---~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~i 139 (287)
... .+ .+...+.+++...++..|+.. -...+.|+.+|..+.+...+ ......++++
T Consensus 284 ~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~----------------~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~ 347 (567)
T 1qks_A 284 TRGMTYDEQEYHPEPRVAAILASHYRPEFIVN----------------VKETGKILLVDYTDLNNLKTTEISAERFLHDG 347 (567)
T ss_dssp CCEECTTTCCEESCCCEEEEEECSSSSEEEEE----------------ETTTTEEEEEETTCSSEEEEEEEECCSSEEEE
T ss_pred ccccccccccccCCCceEEEEEcCCCCEEEEE----------------ecCCCeEEEEecCCCccceeeeeeccccccCc
Confidence 111 00 011244567666665554431 12356888888754321111 1223467888
Q ss_pred EEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEe-ccCCCCC-ccee-eCCC-CCEEEEEeccchhHHHHhhcchhHH
Q 023085 140 ALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFA-ENLPGAP-DNIN-LAPD-GTFWIAIIKLDARRMKILNSSKLIK 215 (287)
Q Consensus 140 ~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~-~~i~-~d~~-G~lwv~~~~~~~~~~~~~~~~~~~~ 215 (287)
.|+|+++++|+++..+++|..+|.+..++... ... ...+ .| .+.. ++++ |.+|++..-.
T Consensus 348 ~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~-i~vgg~~P-hpg~g~~~~~p~~g~v~~t~~~g--------------- 410 (567)
T 1qks_A 348 GLDGSHRYFITAANARNKLVVIDTKEGKLVAI-EDTGGQTP-HPGRGANFVHPTFGPVWATSHMG--------------- 410 (567)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEETTTTEEEEE-EECSSSSB-CCTTCEEEEETTTEEEEEEEBSS---------------
T ss_pred eECCCCCEEEEEeCCCCeEEEEECCCCcEEEE-EeccCcCC-CCccceeeECCCCCcEEEeCCCC---------------
Confidence 99999999999998889999999765322111 111 1111 22 3443 4776 6899877531
Q ss_pred HHHHhCCccccccccCCCceEEEEECCCC--------cEEEEEECCCCccccceEEEEE--eCCEEEEEecC------CC
Q 023085 216 HVLAAYPKLFSQFITLGGGAHLIHVAEDG--------TIIRNLVDPTGQLMSFVTSGLQ--VDNHLYVISLT------SN 279 (287)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~g--------~~~~~~~~~~~~~~~~~~~~~~--~~g~l~i~~~~------~~ 279 (287)
.+.|..++.+. +.+..+....+ ....+.. +..+||+.+.. ++
T Consensus 411 ------------------~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~----g~~~i~~~p~~~~l~v~~~~~~~~~~~~ 468 (567)
T 1qks_A 411 ------------------DDSVALIGTDPEGHPDNAWKILDSFPALGG----GSLFIKTHPNSQYLYVDATLNPEAEISG 468 (567)
T ss_dssp ------------------SSEEEEEECCTTTCTTTBTSEEEEEECSCS----CCCCEECCTTCSEEEEECTTCSSHHHHT
T ss_pred ------------------CCeEEEecCCCCCCccccCEEEEEEecCCC----CCEEEEeCCCCCeEEEecCCCCCcccCc
Confidence 24677776543 45666664321 1122222 35789998853 45
Q ss_pred eEEEEeC
Q 023085 280 FIGKVQL 286 (287)
Q Consensus 280 ~i~~~~~ 286 (287)
+|.+||+
T Consensus 469 ~v~v~d~ 475 (567)
T 1qks_A 469 SVAVFDI 475 (567)
T ss_dssp CEEEEEG
T ss_pred eEEEEEC
Confidence 9999986
No 123
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.91 E-value=2.3e-07 Score=75.46 Aligned_cols=139 Identities=17% Similarity=0.190 Sum_probs=93.7
Q ss_pred CCcEEEEe-cCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCCCceEEEc-cCC--cEEEeeecCCccccc
Q 023085 4 NGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLSYVNGSKLRF 77 (287)
Q Consensus 4 ~G~l~~~~-~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g--~~~~~~~~~~~~~~~ 77 (287)
.+.||+.+ .++.++.|| +.+..........++ +++.|. ++||+++....|..+| .+. ...+.-...+.+...
T Consensus 105 g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGw-GLt~Dg-~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~ 182 (268)
T 3nok_A 105 GERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGW-GLCYWN-GKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVEL 182 (268)
T ss_dssp SSCEEEEESSSCEEEEEETTTTEEEEEEECSSCCC-CEEEET-TEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred CCEEEEEEccCCEEEEEECCcCcEEEEEeCCCcee-EEecCC-CEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCccccc
Confidence 35899998 677889999 444433333344556 777552 4799998656799999 555 444433334455567
Q ss_pred cceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeec--------------cccccceEEEcc
Q 023085 78 ANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--------------GFYFANGVALSR 143 (287)
Q Consensus 78 ~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--------------~~~~~~~i~~~~ 143 (287)
++.+... +|.||+.... ...|.++|++++++..... ...-+||||++|
T Consensus 183 lNeLe~~-dG~lyanvw~-----------------s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp 244 (268)
T 3nok_A 183 INELECA-NGVIYANIWH-----------------SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEP 244 (268)
T ss_dssp EEEEEEE-TTEEEEEETT-----------------CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECT
T ss_pred ccccEEe-CCEEEEEECC-----------------CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcC
Confidence 7777776 7899986422 4589999999998754321 113569999999
Q ss_pred CCCEEEEEeCCCCEEEEEE
Q 023085 144 DEDYVVVCESWKFRCRKYW 162 (287)
Q Consensus 144 ~~~~l~v~~~~~~~l~~~~ 162 (287)
+++.|||+.-.=.+++.+.
T Consensus 245 ~~~rlfVTGK~Wp~~~ev~ 263 (268)
T 3nok_A 245 GSGRIFMTGKLWPRLFEVR 263 (268)
T ss_dssp TTCCEEEEETTCSEEEEEE
T ss_pred CCCEEEEeCCCCCceEEEE
Confidence 9999999874334555544
No 124
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.90 E-value=7.6e-06 Score=69.02 Aligned_cols=215 Identities=12% Similarity=0.070 Sum_probs=130.2
Q ss_pred EEEEecCCeEEEEE--CCceEE-EEeeCCccccCeEECCCCcEEEEeCC-CceEEEc-cCC-c-EEEeeecCCccccccc
Q 023085 7 IYTATRDGWIKRLQ--DGTWVN-WKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG-V-ENFLSYVNGSKLRFAN 79 (287)
Q Consensus 7 l~~~~~~g~i~~~~--~~~~~~-~~~~~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~-~~g-~-~~~~~~~~~~~~~~~~ 79 (287)
+..++.++.|..|+ +++... +........ .+++.++|+..++... ..+..++ +++ . ..+. . ....+.
T Consensus 95 l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~-~----~~~~v~ 168 (321)
T 3ow8_A 95 AASSSLDAHIRLWDLENGKQIKSIDAGPVDAW-TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD-T----RGKFIL 168 (321)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCTTCCC-CEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE-C----SSSCEE
T ss_pred EEEEeCCCcEEEEECCCCCEEEEEeCCCccEE-EEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec-C----CCceEE
Confidence 44555788888888 444333 222233344 7899999986665434 4577777 555 2 2221 1 123567
Q ss_pred eEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee-ccccccceEEEccCCCEEEEEeCCCCEE
Q 023085 80 DVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCESWKFRC 158 (287)
Q Consensus 80 ~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~l~v~~~~~~~l 158 (287)
.+++.++|.++++. ...+.|..+|..+++..... ........++++|+++.|..+ ...+.|
T Consensus 169 ~~~~spdg~~lasg-----------------~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~-s~dg~i 230 (321)
T 3ow8_A 169 SIAYSPDGKYLASG-----------------AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTA-SDDGYI 230 (321)
T ss_dssp EEEECTTSSEEEEE-----------------ETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEE-CTTSCE
T ss_pred EEEECCCCCEEEEE-----------------cCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEE-cCCCeE
Confidence 89999999877752 23567888898877654433 233445789999999855554 456779
Q ss_pred EEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEE
Q 023085 159 RKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLI 238 (287)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 238 (287)
..|++.... ....+. .-......+++.++|.+.++... .+.|.
T Consensus 231 ~iwd~~~~~--~~~~~~-~h~~~v~~~~~sp~~~~l~s~s~----------------------------------D~~v~ 273 (321)
T 3ow8_A 231 KIYDVQHAN--LAGTLS-GHASWVLNVAFCPDDTHFVSSSS----------------------------------DKSVK 273 (321)
T ss_dssp EEEETTTCC--EEEEEC-CCSSCEEEEEECTTSSEEEEEET----------------------------------TSCEE
T ss_pred EEEECCCcc--eeEEEc-CCCCceEEEEECCCCCEEEEEeC----------------------------------CCcEE
Confidence 999875432 111221 12223567889999987666554 24566
Q ss_pred EECCC-CcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 239 HVAED-GTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 239 ~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
.++.+ ++.+..+.... ..+..+... +++..++.-..+.|.++|+
T Consensus 274 iwd~~~~~~~~~~~~h~----~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 274 VWDVGTRTCVHTFFDHQ----DQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEETTTTEEEEEECCCS----SCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEeCCCCEEEEEEcCCC----CcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 66654 55666665332 246677765 4554455555567777764
No 125
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.90 E-value=3.8e-06 Score=76.24 Aligned_cols=216 Identities=13% Similarity=0.156 Sum_probs=131.4
Q ss_pred CCCCc-EEEEecCCeEEEEE-CCceEEEEe-eCCccccCeEECCCCcEEEE-eCCCceEEEccCC--cEEEeeecCCccc
Q 023085 2 DKNGV-IYTATRDGWIKRLQ-DGTWVNWKF-IDSQTLVGLTSTKEGHLIIC-DNANGLHKVSEDG--VENFLSYVNGSKL 75 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~-~~~~~~~~~-~~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~~~g--~~~~~~~~~~~~~ 75 (287)
.++|. |..++.++.|..|+ +++...... ...... .+++.+||+++++ ...+.|..++.++ ...+... .
T Consensus 353 s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~-~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~-----~ 426 (577)
T 2ymu_A 353 SPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVR-GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGH-----S 426 (577)
T ss_dssp CTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEE-EEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECC-----S
T ss_pred CCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeE-EEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCC-----C
Confidence 35664 55666888888888 555433322 233334 8899999975554 4334466677555 4444221 2
Q ss_pred cccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCC
Q 023085 76 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK 155 (287)
Q Consensus 76 ~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~ 155 (287)
..+.++++.+++.+.++. ..++.|..++.....+..+.........++++|+++.|..+. ..
T Consensus 427 ~~v~~~~~s~d~~~l~~~-----------------~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~-~d 488 (577)
T 2ymu_A 427 SSVWGVAFSPDDQTIASA-----------------SDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASAS-DD 488 (577)
T ss_dssp SCEEEEEECTTSSEEEEE-----------------ETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEE-TT
T ss_pred CCeEEEEECCCCCEEEEE-----------------cCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe-CC
Confidence 356789999999877642 234667777866444444444445567889999999666554 45
Q ss_pred CEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCce
Q 023085 156 FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGA 235 (287)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
+.|..|+.++. ....+. .-......+++.++|++.++... .+
T Consensus 489 ~~i~iw~~~~~---~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~----------------------------------dg 530 (577)
T 2ymu_A 489 KTVKLWNRNGQ---LLQTLT-GHSSSVRGVAFSPDGQTIASASD----------------------------------DK 530 (577)
T ss_dssp SEEEEEETTSC---EEEEEE-CCSSCEEEEEECTTSSCEEEEET----------------------------------TS
T ss_pred CEEEEEcCCCC---EEEEEe-CCCCCEEEEEEcCCCCEEEEEEC----------------------------------cC
Confidence 77888885432 122222 12234667889999986665544 35
Q ss_pred EEEEECCCCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEE
Q 023085 236 HLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGK 283 (287)
Q Consensus 236 ~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~ 283 (287)
.|..++.+++.+..+....+ .+..+.+. +++..++.-....|.+
T Consensus 531 ~v~lwd~~~~~~~~~~~h~~----~v~~~~fs~dg~~l~s~~~D~~i~~ 575 (577)
T 2ymu_A 531 TVKLWNRNGQLLQTLTGHSS----SVWGVAFSPDGQTIASASSDKTVKL 575 (577)
T ss_dssp EEEEECTTSCEEEEEECCSS----CEEEEEECTTSSCEEEEETTSCEEE
T ss_pred EEEEEeCCCCEEEEEcCCCC----CEEEEEEcCCCCEEEEEeCCCEEEE
Confidence 67778888888888765332 46677765 5554444333334544
No 126
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.89 E-value=2.8e-06 Score=77.09 Aligned_cols=217 Identities=13% Similarity=0.169 Sum_probs=125.7
Q ss_pred CCCc-EEEEecCCeEEEEE-CCc-eEEEEeeCCccccCeEECCCCcEEEEeCCCc-eEEEccCC--cEEEeeecCCcccc
Q 023085 3 KNGV-IYTATRDGWIKRLQ-DGT-WVNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVSEDG--VENFLSYVNGSKLR 76 (287)
Q Consensus 3 ~~G~-l~~~~~~g~i~~~~-~~~-~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~g-i~~~~~~g--~~~~~~~~~~~~~~ 76 (287)
++|. |..++.++.|..|+ ++. ...+........ .+++.++|+..++....+ +..++.++ ...+... ..
T Consensus 313 ~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~-~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~-----~~ 386 (577)
T 2ymu_A 313 PDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVW-GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGH-----SS 386 (577)
T ss_dssp TTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECC-----SS
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEE-EEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCC-----CC
Confidence 4553 45556778888888 433 333322223334 789999997655543444 55556555 4443221 23
Q ss_pred ccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCCC
Q 023085 77 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKF 156 (287)
Q Consensus 77 ~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~ 156 (287)
.+.++++.++|..+++. ..++.|..++.....+..+.........++++|+++.|..+. ..+
T Consensus 387 ~v~~~~~s~dg~~l~~~-----------------~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~-~d~ 448 (577)
T 2ymu_A 387 SVRGVAFSPDGQTIASA-----------------SDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASAS-DDK 448 (577)
T ss_dssp CEEEEEECTTSSCEEEE-----------------ETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE-TTS
T ss_pred CeEEEEECCCCCEEEEE-----------------eCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEc-CCC
Confidence 57789999999866642 234567778765333444444444557789999999666655 457
Q ss_pred EEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceE
Q 023085 157 RCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAH 236 (287)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
.|..|+.++. ....+. ........+++.++|++.++... .+.
T Consensus 449 ~v~~w~~~~~---~~~~~~-~~~~~v~~~~~spd~~~las~~~----------------------------------d~~ 490 (577)
T 2ymu_A 449 TVKLWNRNGQ---LLQTLT-GHSSSVRGVAFSPDGQTIASASD----------------------------------DKT 490 (577)
T ss_dssp EEEEEETTSC---EEEEEE-CCSSCEEEEEECTTSCEEEEEET----------------------------------TSE
T ss_pred EEEEEECCCC---EEEEEc-CCCCCEEEEEEcCCCCEEEEEeC----------------------------------CCE
Confidence 7888885432 122222 12234567889999987766654 245
Q ss_pred EEEECCCCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEe
Q 023085 237 LIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQ 285 (287)
Q Consensus 237 v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~ 285 (287)
|..++.+++.+..+....+ .+..+... ++++.++.-....|.++|
T Consensus 491 i~iw~~~~~~~~~~~~h~~----~v~~l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 491 VKLWNRNGQLLQTLTGHSS----SVRGVAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp EEEEETTSCEEEEEECCSS----CEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEcCCCCEEEEEeCCCC----CEEEEEEcCCCCEEEEEECcCEEEEEe
Confidence 6666777777777664332 34555553 344333333334455444
No 127
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.87 E-value=4.8e-07 Score=72.90 Aligned_cols=140 Identities=19% Similarity=0.130 Sum_probs=94.5
Q ss_pred CCcEEEEe-cCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCCCceEEEc-cCC--cEEEeeecCCccccc
Q 023085 4 NGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLSYVNGSKLRF 77 (287)
Q Consensus 4 ~G~l~~~~-~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g--~~~~~~~~~~~~~~~ 77 (287)
.++||..+ .++.++.|| +.+.......+..++ +++.| .++||+++....|..+| .+. ...+.-...+.+...
T Consensus 74 ~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gw-glt~d-g~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~ 151 (243)
T 3mbr_X 74 RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGW-ALTSD-DSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDN 151 (243)
T ss_dssp TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCC-EEEEC-SSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCce-EEeeC-CCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccccc
Confidence 35899998 678889999 444333333344556 66654 34899998666799999 554 444433334455567
Q ss_pred cceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeec--------------cccccceEEEcc
Q 023085 78 ANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--------------GFYFANGVALSR 143 (287)
Q Consensus 78 ~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--------------~~~~~~~i~~~~ 143 (287)
++.+... +|.||+.... ...|.++|++++++..... ...-+|||+++|
T Consensus 152 lNeLe~~-~G~lyanvw~-----------------s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~ 213 (243)
T 3mbr_X 152 LNELEWV-NGELLANVWL-----------------TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDA 213 (243)
T ss_dssp EEEEEEE-TTEEEEEETT-----------------TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEET
T ss_pred ceeeEEe-CCEEEEEECC-----------------CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcC
Confidence 7777766 7899985422 4589999999998754311 113569999999
Q ss_pred CCCEEEEEeCCCCEEEEEEe
Q 023085 144 DEDYVVVCESWKFRCRKYWL 163 (287)
Q Consensus 144 ~~~~l~v~~~~~~~l~~~~~ 163 (287)
+++.|||+.-.=.+++.+.+
T Consensus 214 ~~~~lfVTGK~wp~~~~v~~ 233 (243)
T 3mbr_X 214 EHDRLFVTGKRWPMLYEIRL 233 (243)
T ss_dssp TTTEEEEEETTCSEEEEEEE
T ss_pred CCCEEEEECCCCCcEEEEEE
Confidence 99999999754456666554
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.86 E-value=9.9e-07 Score=77.37 Aligned_cols=196 Identities=16% Similarity=0.132 Sum_probs=122.0
Q ss_pred CCCCc-EEEEecC---CeEEEEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeCC---CceEEEc-cCC-cEEEeee
Q 023085 2 DKNGV-IYTATRD---GWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA---NGLHKVS-EDG-VENFLSY 69 (287)
Q Consensus 2 d~~G~-l~~~~~~---g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~---~gi~~~~-~~g-~~~~~~~ 69 (287)
.++|. |.+++.+ ..|+.++ +++...+........ .+++.|||+ |+++... ..|+.++ .++ ...+...
T Consensus 187 Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~-~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~ 265 (415)
T 2hqs_A 187 SPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNG-APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG 265 (415)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEE-EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCC
T ss_pred cCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCccc-CEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCC
Confidence 46774 5556544 3888888 566555544444445 789999997 5534322 2488888 666 5444221
Q ss_pred cCCccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEE
Q 023085 70 VNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYV 148 (287)
Q Consensus 70 ~~~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 148 (287)
...+..+++.++|. |+++... .....|+.++..+++...+.........++++|+|+.|
T Consensus 266 -----~~~~~~~~~spdg~~l~~~s~~---------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l 325 (415)
T 2hqs_A 266 -----RSNNTEPTWFPDSQNLAFTSDQ---------------AGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFM 325 (415)
T ss_dssp -----SSCEEEEEECTTSSEEEEEECT---------------TSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEE
T ss_pred -----CCcccceEECCCCCEEEEEECC---------------CCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEE
Confidence 13456788999997 4443210 12337999998877765554433455678899999988
Q ss_pred EEEeCC--CCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCE-EEEEeccchhHHHHhhcchhHHHHHHhCCccc
Q 023085 149 VVCESW--KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTF-WIAIIKLDARRMKILNSSKLIKHVLAAYPKLF 225 (287)
Q Consensus 149 ~v~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l-wv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (287)
+++... ...|+.+++++.+ ...+.. . .....+++.++|+. ..++..
T Consensus 326 ~~~~~~~g~~~i~~~d~~~~~---~~~l~~-~-~~~~~~~~spdg~~l~~~s~~-------------------------- 374 (415)
T 2hqs_A 326 VMVSSNGGQQHIAKQDLATGG---VQVLSS-T-FLDETPSLAPNGTMVIYSSSQ-------------------------- 374 (415)
T ss_dssp EEEEECSSCEEEEEEETTTCC---EEECCC-S-SSCEEEEECTTSSEEEEEEEE--------------------------
T ss_pred EEEECcCCceEEEEEECCCCC---EEEecC-C-CCcCCeEEcCCCCEEEEEEcC--------------------------
Confidence 887654 3478889876432 222221 1 24667889999974 444433
Q ss_pred cccccCCCceEEEEECCCCcEEEEEECCCC
Q 023085 226 SQFITLGGGAHLIHVAEDGTIIRNLVDPTG 255 (287)
Q Consensus 226 ~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~ 255 (287)
.....|+.++.+++....+....+
T Consensus 375 ------~~~~~l~~~d~~g~~~~~l~~~~~ 398 (415)
T 2hqs_A 375 ------GMGSVLNLVSTDGRFKARLPATDG 398 (415)
T ss_dssp ------TTEEEEEEEETTSCCEEECCCSSS
T ss_pred ------CCccEEEEEECCCCcEEEeeCCCC
Confidence 112378889888887777765444
No 129
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.86 E-value=8.8e-06 Score=70.33 Aligned_cols=89 Identities=8% Similarity=-0.005 Sum_probs=52.8
Q ss_pred CCC-cEEEEec-CC----eEEEEE--CCceEEEEeeCCccccCeEECCCC-cEEEEeC----------CCceEEEc-cCC
Q 023085 3 KNG-VIYTATR-DG----WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEG-HLIICDN----------ANGLHKVS-EDG 62 (287)
Q Consensus 3 ~~G-~l~~~~~-~g----~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg-~l~v~~~----------~~gi~~~~-~~g 62 (287)
+++ .+|+.+. .. .|..++ +++.......... - ++++++|| .||+++. .+.|.++| .+.
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~-p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL-P-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCC-C-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 345 5888764 32 778888 5554333222223 3 89999999 5899863 23477888 454
Q ss_pred --cEEEeeecCCc--cccccceEEEcCCCc-EEEEc
Q 023085 63 --VENFLSYVNGS--KLRFANDVVEASDGS-LYFTV 93 (287)
Q Consensus 63 --~~~~~~~~~~~--~~~~~~~l~~d~~g~-l~v~~ 93 (287)
...+....... ....|..++++++|. ||+++
T Consensus 108 ~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n 143 (373)
T 2mad_H 108 LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQ 143 (373)
T ss_pred cEEEEEECCCccccccCCCccceEECCCCCEEEEEe
Confidence 23321110000 013578899999985 78865
No 130
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=98.86 E-value=3e-07 Score=80.12 Aligned_cols=218 Identities=11% Similarity=0.046 Sum_probs=122.1
Q ss_pred CCCCCcEEEEecCCeEEEEE--C--CceEEEEe-eCCccccCeEECC--CCcEEEEeCCC----ceEEEccCC--cEEEe
Q 023085 1 MDKNGVIYTATRDGWIKRLQ--D--GTWVNWKF-IDSQTLVGLTSTK--EGHLIICDNAN----GLHKVSEDG--VENFL 67 (287)
Q Consensus 1 ~d~~G~l~~~~~~g~i~~~~--~--~~~~~~~~-~~~~~~~~i~~d~--dg~l~v~~~~~----gi~~~~~~g--~~~~~ 67 (287)
+|++|.||+++..| ++++. + ..+..... ........|++|+ +++||+++... +|++.+..| ++.+.
T Consensus 19 ~d~~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~ 97 (394)
T 3b7f_A 19 ESGPVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEAT 97 (394)
T ss_dssp CCSCCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECS
T ss_pred CCCCCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECC
Confidence 36788999999765 77777 3 35554421 2223333889998 78999997654 688876444 55543
Q ss_pred eec--CCc-------cccccceEEEcC---CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccc--
Q 023085 68 SYV--NGS-------KLRFANDVVEAS---DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-- 133 (287)
Q Consensus 68 ~~~--~~~-------~~~~~~~l~~d~---~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-- 133 (287)
... ... ....+.+|++++ .+.+|+.. ..++|++.+.....++.+....
T Consensus 98 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~------------------~~ggl~~S~DgG~tW~~~~~~~~~ 159 (394)
T 3b7f_A 98 RPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGT------------------SPQGLFRSTDHGASWEPVAGFNDH 159 (394)
T ss_dssp BCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEE------------------ETTEEEEESSTTSBCEECHHHHTC
T ss_pred ccccCCCcccccccccccceeEEEeCCCCCCCEEEEEe------------------cCCcEEEEcCCCCCeEECcCccCC
Confidence 211 000 112455688885 67899942 2457888875544455442110
Q ss_pred -----------------cccceEEEccC-CCEEEEEeCCCCEEEEEEecCCCCcceeE-Ee-ccCC-------CCCccee
Q 023085 134 -----------------YFANGVALSRD-EDYVVVCESWKFRCRKYWLKGERKGKLET-FA-ENLP-------GAPDNIN 186 (287)
Q Consensus 134 -----------------~~~~~i~~~~~-~~~l~v~~~~~~~l~~~~~~~~~~~~~~~-~~-~~~~-------~~~~~i~ 186 (287)
.....|+++|. .+.+|++... +.|++.+..+.+...... .. ...+ .....|+
T Consensus 160 p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~ 238 (394)
T 3b7f_A 160 PMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVV 238 (394)
T ss_dssp TTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEE
T ss_pred ccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEE
Confidence 11235777773 4458887543 457766533322211100 00 0000 1134577
Q ss_pred eCCC--CCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEECCCCccc---cce
Q 023085 187 LAPD--GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLM---SFV 261 (287)
Q Consensus 187 ~d~~--G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~---~~~ 261 (287)
++++ +.||+++.. +|++.+..|+....+.. +... ...
T Consensus 239 ~~~~~~~~l~vg~~~------------------------------------gl~~s~D~G~tW~~~~~--~l~~~~~~~~ 280 (394)
T 3b7f_A 239 QHPAAPDILYQQNHC------------------------------------GIYRMDRREGVWKRIGD--AMPREVGDIG 280 (394)
T ss_dssp ECSSSTTEEEEEETT------------------------------------EEEEEETTTTEEECGGG--GSCTTTCSCE
T ss_pred ECCCCCCEEEEEcCC------------------------------------eEEEeCCCCCcceECCC--CCCCCCccce
Confidence 8875 789998765 78887766766555432 1111 233
Q ss_pred EEEEEe---CCEEEEEec
Q 023085 262 TSGLQV---DNHLYVISL 276 (287)
Q Consensus 262 ~~~~~~---~g~l~i~~~ 276 (287)
..+.++ .+.||+++.
T Consensus 281 ~~i~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 281 FPIVVHQRDPRTVWVFPM 298 (394)
T ss_dssp EEEEECSSCTTCEEEEEC
T ss_pred EEEEECCCCCCEEEEEec
Confidence 455553 478999864
No 131
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.85 E-value=2e-06 Score=75.25 Aligned_cols=190 Identities=8% Similarity=0.025 Sum_probs=111.3
Q ss_pred cEEEEe-cCCeEEEEE--CC----ceEEEEee-------C-CccccCeEECCCCcEEEEeCC-------CceEEEc-cCC
Q 023085 6 VIYTAT-RDGWIKRLQ--DG----TWVNWKFI-------D-SQTLVGLTSTKEGHLIICDNA-------NGLHKVS-EDG 62 (287)
Q Consensus 6 ~l~~~~-~~g~i~~~~--~~----~~~~~~~~-------~-~~~~~~i~~d~dg~l~v~~~~-------~gi~~~~-~~g 62 (287)
.||+.. ..++|+.++ +. +.....++ . ..|. .+...++| +||+..+ .++..+| .++
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph-~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~ 174 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLH-TVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF 174 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEE-EEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC
T ss_pred EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCccc-ceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC
Confidence 688877 668999999 22 22222210 1 2466 77888999 9997543 3699999 555
Q ss_pred --cEEEeeecCCccccccceEEEcCCCcEEEEcCCCC-CC-CcceeeeeeccCCCceEEEEeCCCCeeEEeec---cccc
Q 023085 63 --VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSK-YL-PHEYCLDILEGKPHGQLLKYDPSSNITTLVAD---GFYF 135 (287)
Q Consensus 63 --~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~-~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~~~ 135 (287)
+..+... ..+....+++.+.+++++.++...+. -. ...|..+.+.+.....|..+|..++++..... ....
T Consensus 175 ~v~~~~~~~--~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~ 252 (462)
T 2ece_A 175 EPLGKWEID--RGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRM 252 (462)
T ss_dssp CEEEECCSB--CTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEE
T ss_pred eEEEEEccC--CCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCc
Confidence 3433211 22234566788888887666532110 00 00111111111234678889887776443221 1245
Q ss_pred cceEEE--ccCCCEEEEEeC-----CCCEEEEEEecCCCCcceeEE-ecc------C----------CCCCcceeeCCCC
Q 023085 136 ANGVAL--SRDEDYVVVCES-----WKFRCRKYWLKGERKGKLETF-AEN------L----------PGAPDNINLAPDG 191 (287)
Q Consensus 136 ~~~i~~--~~~~~~l~v~~~-----~~~~l~~~~~~~~~~~~~~~~-~~~------~----------~~~~~~i~~d~~G 191 (287)
|..+.+ +|+++.+|++.. .++.|++|..++++....+.+ ... . .+.|.+|.+++||
T Consensus 253 P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DG 332 (462)
T 2ece_A 253 ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDD 332 (462)
T ss_dssp EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTS
T ss_pred cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCC
Confidence 667766 999999999998 888898877654322211111 000 0 2468899999998
Q ss_pred C-EEEEEec
Q 023085 192 T-FWIAIIK 199 (287)
Q Consensus 192 ~-lwv~~~~ 199 (287)
+ ||+++..
T Consensus 333 rfLYVSnrg 341 (462)
T 2ece_A 333 KFLYLSLWG 341 (462)
T ss_dssp CEEEEEETT
T ss_pred CEEEEEeCC
Confidence 5 8888876
No 132
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.83 E-value=8.7e-06 Score=68.10 Aligned_cols=174 Identities=10% Similarity=0.073 Sum_probs=102.3
Q ss_pred CCCCcEEEEecCCeEEEEE--CCc----eEEEEe-eCCccccCeEECCCCcEE-EEeCCCceEEEc-cCC-cEEEeeecC
Q 023085 2 DKNGVIYTATRDGWIKRLQ--DGT----WVNWKF-IDSQTLVGLTSTKEGHLI-ICDNANGLHKVS-EDG-VENFLSYVN 71 (287)
Q Consensus 2 d~~G~l~~~~~~g~i~~~~--~~~----~~~~~~-~~~~~~~~i~~d~dg~l~-v~~~~~gi~~~~-~~g-~~~~~~~~~ 71 (287)
.++|.+.++..+|.|..|+ ++. ...+.. ....+...+++.+++++. ++...+.|..++ .++ .........
T Consensus 60 ~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 139 (337)
T 1gxr_A 60 SNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTS 139 (337)
T ss_dssp CSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEEC
T ss_pred ecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeeccc
Confidence 4567544444488899898 322 122211 122233378899999754 444444577777 555 322222111
Q ss_pred CccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee-ccccccceEEEccCCCEEEE
Q 023085 72 GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVV 150 (287)
Q Consensus 72 ~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~l~v 150 (287)
....+..+++.+++..+++. ...+.|..+|..+++..... ........++++|+++.++.
T Consensus 140 --~~~~i~~~~~~~~~~~l~~~-----------------~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 200 (337)
T 1gxr_A 140 --SAPACYALAISPDSKVCFSC-----------------CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWT 200 (337)
T ss_dssp --SSSCEEEEEECTTSSEEEEE-----------------ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred --CCCceEEEEECCCCCEEEEE-----------------eCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEE
Confidence 12356788999988766642 23467888888777644332 33445678899999987776
Q ss_pred EeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 151 CESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
+. ..+.|..|++...+ ....+ .....+..+++.++|++.++...
T Consensus 201 ~~-~dg~i~~~d~~~~~--~~~~~--~~~~~v~~~~~s~~~~~l~~~~~ 244 (337)
T 1gxr_A 201 GG-LDNTVRSWDLREGR--QLQQH--DFTSQIFSLGYCPTGEWLAVGME 244 (337)
T ss_dssp EE-TTSEEEEEETTTTE--EEEEE--ECSSCEEEEEECTTSSEEEEEET
T ss_pred Ee-cCCcEEEEECCCCc--eEeee--cCCCceEEEEECCCCCEEEEEcC
Confidence 65 46789999975432 11112 12334667888898876655543
No 133
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.81 E-value=2.1e-07 Score=79.60 Aligned_cols=183 Identities=11% Similarity=0.091 Sum_probs=104.9
Q ss_pred cccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCC--CeeEEeec-------cccccceEEEcc--C
Q 023085 76 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS--NITTLVAD-------GFYFANGVALSR--D 144 (287)
Q Consensus 76 ~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~-------~~~~~~~i~~~~--~ 144 (287)
..|.+++++++|.+|++...+..+...+. ....|.|+++|+++ .+...+.. ....|+|+.+.+ +
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~-----~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~d 124 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFD-----PDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDD 124 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC----------------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTT
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccC-----CCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCC
Confidence 46789999999999998532111111111 12467899999863 33333321 123689998766 4
Q ss_pred CC-EEEEEeCC--CCEEEEEEec--CCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec-cchhHHHHhhcchhHHHHH
Q 023085 145 ED-YVVVCESW--KFRCRKYWLK--GERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK-LDARRMKILNSSKLIKHVL 218 (287)
Q Consensus 145 ~~-~l~v~~~~--~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~-~~~~~~~~~~~~~~~~~~~ 218 (287)
++ .||+++.. +.++..|+.+ +....-...+.......|+++++|++|.+|+++.- .+..... ..
T Consensus 125 g~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~----------~~ 194 (355)
T 3sre_A 125 NTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLK----------SW 194 (355)
T ss_dssp CCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHH----------HH
T ss_pred CcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccc----------cc
Confidence 54 58999865 3455555544 22111122222223346899999999999999852 2111111 00
Q ss_pred HhCCccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEEEEEe--CCEEEEEecCCCeEEEEeCC
Q 023085 219 AAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~~~~i~~~~~~ 287 (287)
... .....+.|+++++. + ...+. ++ +..+.+++.+ +..||++.....+|.+|+++
T Consensus 195 e~~--------~~~~~g~vyr~d~~-~-~~~~~--~~--l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 195 EMH--------LGLAWSFVTYYSPN-D-VRVVA--EG--FDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp HHH--------TTCCCEEEEEECTT-C-CEEEE--EE--ESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred hhh--------ccCCccEEEEEECC-e-EEEee--cC--CcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 000 02235799999984 3 22222 12 2345666664 46899999999999999874
No 134
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.79 E-value=7.6e-06 Score=69.63 Aligned_cols=225 Identities=10% Similarity=0.036 Sum_probs=128.8
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCce---EEEEeeCCccccCeEECCCCcEEEE-eCCCceEEEc-cCC-cEEEeeecCC
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTW---VNWKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG-VENFLSYVNG 72 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~---~~~~~~~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~-~~g-~~~~~~~~~~ 72 (287)
.++|. |.+++.++.|..|+ ++++ ..+........ .+++.++++++++ ...+.|..++ .++ ........
T Consensus 17 s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-- 93 (372)
T 1k8k_C 17 NKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVT-GVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVIL-- 93 (372)
T ss_dssp CTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEE-EEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECC--
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCccc-EEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEee--
Confidence 46675 55666889999998 4532 22222233334 8899999976555 4334577777 566 33322211
Q ss_pred ccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe----eEEeec-cccccceEEEccCCCE
Q 023085 73 SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI----TTLVAD-GFYFANGVALSRDEDY 147 (287)
Q Consensus 73 ~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~~~~-~~~~~~~i~~~~~~~~ 147 (287)
.....+.++++.+++..+++. ...+.|..++..++. ...... .......++++|+++.
T Consensus 94 ~~~~~v~~~~~~~~~~~l~~~-----------------~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 94 RINRAARCVRWAPNEKKFAVG-----------------SGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVL 156 (372)
T ss_dssp CCSSCEEEEEECTTSSEEEEE-----------------ETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSE
T ss_pred cCCCceeEEEECCCCCEEEEE-----------------eCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCE
Confidence 112457889999998766642 123444444433232 122212 2344678889999986
Q ss_pred EEEEeCCCCEEEEEEecCCC---------------CcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcch
Q 023085 148 VVVCESWKFRCRKYWLKGER---------------KGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSK 212 (287)
Q Consensus 148 l~v~~~~~~~l~~~~~~~~~---------------~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~ 212 (287)
++.+. ..+.|..|++.... ..+.........+....++++++|++.++...
T Consensus 157 l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------- 222 (372)
T 1k8k_C 157 LAAGS-CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH------------- 222 (372)
T ss_dssp EEEEE-TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET-------------
T ss_pred EEEEc-CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC-------------
Confidence 66655 45778889864110 11111111112234567888898876555544
Q ss_pred hHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 213 LIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|..++. .++.+..+..... .+..+... ++++.+++ ..+.|.++++
T Consensus 223 ---------------------d~~i~i~d~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~-~d~~i~i~~~ 272 (372)
T 1k8k_C 223 ---------------------DSTVCLADADKKMAVATLASETL----PLLAVTFITESSLVAAG-HDCFPVLFTY 272 (372)
T ss_dssp ---------------------TTEEEEEEGGGTTEEEEEECSSC----CEEEEEEEETTEEEEEE-TTSSCEEEEE
T ss_pred ---------------------CCEEEEEECCCCceeEEEccCCC----CeEEEEEecCCCEEEEE-eCCeEEEEEc
Confidence 246777775 4677777764332 35666664 67776666 6677777664
No 135
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.78 E-value=1.5e-05 Score=68.47 Aligned_cols=86 Identities=8% Similarity=0.151 Sum_probs=53.8
Q ss_pred cEEEEec------CCeEEEEE--CCceEEEEeeCCccccCeEECCCC-cEEEEeC----------CCceEEEc-cCC--c
Q 023085 6 VIYTATR------DGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEG-HLIICDN----------ANGLHKVS-EDG--V 63 (287)
Q Consensus 6 ~l~~~~~------~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg-~l~v~~~----------~~gi~~~~-~~g--~ 63 (287)
.+|+.+. ++.|+.++ +++..........| ++++++|| .||+++. ...|..+| .++ .
T Consensus 17 ~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~ 94 (361)
T 2oiz_A 17 RIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFE 94 (361)
T ss_dssp EEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEE
T ss_pred EEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEE
Confidence 6888763 46899999 56554333333334 78999999 5888863 12388888 555 3
Q ss_pred EEEeeecCC-ccccccceEEEcCCCc-EEEEc
Q 023085 64 ENFLSYVNG-SKLRFANDVVEASDGS-LYFTV 93 (287)
Q Consensus 64 ~~~~~~~~~-~~~~~~~~l~~d~~g~-l~v~~ 93 (287)
..+...... .....|..++++++|+ ||+++
T Consensus 95 ~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n 126 (361)
T 2oiz_A 95 KEISLPPKRVQGLNYDGLFRQTTDGKFIVLQN 126 (361)
T ss_dssp EEEEECTTBCCBCCCGGGEEECTTSSEEEEEE
T ss_pred EEEEcCccccccCCCcceEEECCCCCEEEEEC
Confidence 333211100 0124688999999985 77764
No 136
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.77 E-value=3.7e-06 Score=71.80 Aligned_cols=142 Identities=11% Similarity=0.017 Sum_probs=87.3
Q ss_pred CeEECCCCcEEEEeCCCceEEEc-cCC--cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCC
Q 023085 37 GLTSTKEGHLIICDNANGLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPH 113 (287)
Q Consensus 37 ~i~~d~dg~l~v~~~~~gi~~~~-~~g--~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~ 113 (287)
.+++.++++|..+...+.|..++ .++ ...+.....+ ....+.++++.++|+..++. ...
T Consensus 87 ~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~-H~~~V~~v~~spdg~~l~sg-----------------s~d 148 (344)
T 4gqb_B 87 DLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYE-HDDIVSTVSVLSSGTQAVSG-----------------SKD 148 (344)
T ss_dssp EEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEEC-CSSCEEEEEECTTSSEEEEE-----------------ETT
T ss_pred EEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccC-CCCCEEEEEECCCCCEEEEE-----------------eCC
Confidence 78888999888887555566677 555 3332211111 12467899999999987752 235
Q ss_pred ceEEEEeCCCCeeEEee-ccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEecc-CCCCCcceeeCCC-
Q 023085 114 GQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPD- 190 (287)
Q Consensus 114 ~~v~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~d~~- 190 (287)
+.|..+|..+++..... ........+++++++..++++.+..+.|..||+...+. ...+... ....+..+++.++
T Consensus 149 ~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~p~~ 226 (344)
T 4gqb_B 149 ICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP--ASQIGCSAPGYLPTSLAWHPQQ 226 (344)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC--EEECC----CCCEEEEEECSSC
T ss_pred CeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce--eeeeecceeeccceeeeecCCC
Confidence 67888888877754433 33445677889998876777766678899999764321 1111111 1123456777774
Q ss_pred CCEEEEEe
Q 023085 191 GTFWIAII 198 (287)
Q Consensus 191 G~lwv~~~ 198 (287)
+++.++..
T Consensus 227 ~~~l~sg~ 234 (344)
T 4gqb_B 227 SEVFVFGD 234 (344)
T ss_dssp TTEEEEEE
T ss_pred CcceEEec
Confidence 45655543
No 137
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.75 E-value=2.1e-05 Score=66.70 Aligned_cols=174 Identities=12% Similarity=0.093 Sum_probs=99.9
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCC-CceEEEc-cCC---cEEEeeecCCc
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG---VENFLSYVNGS 73 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~-~~g---~~~~~~~~~~~ 73 (287)
.++|. |..++.+|.|..|+ +++..............+++.++|++.++... +.+..++ .++ ....... .+
T Consensus 64 s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~-~~- 141 (340)
T 1got_B 64 GTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSREL-AG- 141 (340)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEE-EC-
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEe-cC-
Confidence 35664 55666889999998 44433322222222227889999986665433 3455565 332 2222111 11
Q ss_pred cccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccccccceEEEccCCCEEEEEe
Q 023085 74 KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYVVVCE 152 (287)
Q Consensus 74 ~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~l~v~~ 152 (287)
....+..+.+.+++.+..+ ..++.|..+|..+++.... .........++++|+++.++ +.
T Consensus 142 h~~~v~~~~~~~~~~l~s~------------------s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-sg 202 (340)
T 1got_B 142 HTGYLSCCRFLDDNQIVTS------------------SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV-SG 202 (340)
T ss_dssp CSSCEEEEEEEETTEEEEE------------------ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EE
T ss_pred CCccEEEEEECCCCcEEEE------------------ECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEE-EE
Confidence 1234566667667765443 2356788888877765433 23334567788999998544 44
Q ss_pred CCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 153 SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 153 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
...+.|..||+.... ....+. .-......+++.++|++.++...
T Consensus 203 ~~d~~v~~wd~~~~~--~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~ 246 (340)
T 1got_B 203 ACDASAKLWDVREGM--CRQTFT-GHESDINAICFFPNGNAFATGSD 246 (340)
T ss_dssp ETTSCEEEEETTTCS--EEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred eCCCcEEEEECCCCe--eEEEEc-CCcCCEEEEEEcCCCCEEEEEcC
Confidence 456789999875421 112222 12234667889999987766654
No 138
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.75 E-value=5.3e-07 Score=81.44 Aligned_cols=189 Identities=12% Similarity=0.069 Sum_probs=113.6
Q ss_pred CC-cEEEEe-cCCeEEEEE--CCceEEEEeeC--CccccCeEE-C-CCC-cEEEEeCC------------------CceE
Q 023085 4 NG-VIYTAT-RDGWIKRLQ--DGTWVNWKFID--SQTLVGLTS-T-KEG-HLIICDNA------------------NGLH 56 (287)
Q Consensus 4 ~G-~l~~~~-~~g~i~~~~--~~~~~~~~~~~--~~~~~~i~~-d-~dg-~l~v~~~~------------------~gi~ 56 (287)
|| .||+.+ .+++|.+++ +.+...+...+ ..|. ++++ . |++ .+|+++.. +-+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~ph-g~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIH-GLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEE-EEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCc-ceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 55 688877 567899999 44544433432 3466 8887 4 777 57777411 1255
Q ss_pred EEc-cCC--cEEEeeecCCccccccceEEEcCCCc-EEEEcCCCCCCCc---------cee--------eeee-ccC--C
Q 023085 57 KVS-EDG--VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPH---------EYC--------LDIL-EGK--P 112 (287)
Q Consensus 57 ~~~-~~g--~~~~~~~~~~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~---------~~~--------~~~~-~~~--~ 112 (287)
.+| .+. ..++. . + ..|..++++++|. +|+++...+-+.. .+. .+.. .+. .
T Consensus 179 vID~~t~~v~~qI~--V-g---g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 179 AVDADKWEVAWQVL--V-S---GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEETTTTEEEEEEE--E-S---SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred EEECCCCeEEEEEE--e-C---CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 566 333 22221 1 1 2577899999874 6777655432100 110 0000 000 0
Q ss_pred CceEEEEeCCC--Cee-EEeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCC------Cc-ceeEEec-cCCCC
Q 023085 113 HGQLLKYDPSS--NIT-TLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGER------KG-KLETFAE-NLPGA 181 (287)
Q Consensus 113 ~~~v~~~~~~~--~~~-~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~------~~-~~~~~~~-~~~~~ 181 (287)
-+.|..+|..+ ++. .........|+|+.++|||+++|+++...+.+..||.+..+ +. +...... .....
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~g 332 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLG 332 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSC
T ss_pred ECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCC
Confidence 13588888876 333 22333345899999999999999999999999999986321 11 1112221 23346
Q ss_pred CcceeeCCCCCEEEEEec
Q 023085 182 PDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 182 ~~~i~~d~~G~lwv~~~~ 199 (287)
|.++++|++|++|++..-
T Consensus 333 P~h~aF~~dG~aY~t~~l 350 (595)
T 1fwx_A 333 PLHTAFDGRGNAYTSLFL 350 (595)
T ss_dssp EEEEEECTTSEEEEEETT
T ss_pred cceEEECCCCeEEEEEec
Confidence 999999999999998865
No 139
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.73 E-value=1.9e-05 Score=66.87 Aligned_cols=237 Identities=13% Similarity=0.027 Sum_probs=131.5
Q ss_pred CCCC-cEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCC------CceEEEc-cCC--cEEEeee
Q 023085 2 DKNG-VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA------NGLHKVS-EDG--VENFLSY 69 (287)
Q Consensus 2 d~~G-~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~------~gi~~~~-~~g--~~~~~~~ 69 (287)
.++| .|..++.+|.|..|+ +++............ .+.+.++++.+++... ..|..++ ..+ ...+...
T Consensus 83 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~ 161 (369)
T 3zwl_B 83 DCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVK-RVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKV 161 (369)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEE-EEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEE
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeE-EEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeeccc
Confidence 3456 456666889999999 455444333333445 8899999976555323 3466666 332 2222111
Q ss_pred cCC--------ccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCC-Cee-EEeeccccccceE
Q 023085 70 VNG--------SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NIT-TLVADGFYFANGV 139 (287)
Q Consensus 70 ~~~--------~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-~~~~~~~~~~~~i 139 (287)
... .....+..+++.+++..+++ +...+.|..+|..+ ++. ..+.........+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------------~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~ 224 (369)
T 3zwl_B 162 SEEPIHKIITHEGLDAATVAGWSTKGKYIIA-----------------GHKDGKISKYDVSNNYEYVDSIDLHEKSISDM 224 (369)
T ss_dssp CSSCSEEEECCTTCCCEEEEEECGGGCEEEE-----------------EETTSEEEEEETTTTTEEEEEEECCSSCEEEE
T ss_pred ccceeeeccCCcCccceeEEEEcCCCCEEEE-----------------EcCCCEEEEEECCCCcEeEEEEecCCCceeEE
Confidence 100 00115677888888876664 22356788888876 343 3333334456788
Q ss_pred EEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccch-hHHHHhhcchhHHHHH
Q 023085 140 ALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDA-RRMKILNSSKLIKHVL 218 (287)
Q Consensus 140 ~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~-~~~~~~~~~~~~~~~~ 218 (287)
+++|+++.|+.+. ..+.|..||+...+ ....+. .......+++.+++...++...... .++....
T Consensus 225 ~~~~~~~~l~~~~-~d~~i~v~d~~~~~--~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--------- 290 (369)
T 3zwl_B 225 QFSPDLTYFITSS-RDTNSFLVDVSTLQ--VLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSA--------- 290 (369)
T ss_dssp EECTTSSEEEEEE-TTSEEEEEETTTCC--EEEEEE--CSSCEEEEEECSSSSEEEEEECCC------------------
T ss_pred EECCCCCEEEEec-CCceEEEEECCCCc--eeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEec---------
Confidence 9999999776665 46789999975432 122222 2234567888888875555543111 1000000
Q ss_pred HhCCccccccccCCCceEEEEECC-CCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 219 AAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
......+..++. .++.+..+.... ..+..+... ++++.++.-..+.|.++++
T Consensus 291 ------------~~~~~~i~~~d~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 291 ------------NEGKFEARFYHKIFEEEIGRVQGHF----GPLNTVAISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp ----------------CEEEEEETTTCCEEEEEECCS----SCEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred ------------CCCcceeEEEecCCCcchhheeccc----CcEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 001124555664 356666665433 246667765 5665566556667777765
No 140
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.73 E-value=2.7e-06 Score=74.59 Aligned_cols=209 Identities=13% Similarity=0.121 Sum_probs=117.4
Q ss_pred CCCC-cEEEEec----------CCeEEEEE--CCceEEEEeeC--------CccccCeEECCCC-cEEEEeCC--CceEE
Q 023085 2 DKNG-VIYTATR----------DGWIKRLQ--DGTWVNWKFID--------SQTLVGLTSTKEG-HLIICDNA--NGLHK 57 (287)
Q Consensus 2 d~~G-~l~~~~~----------~g~i~~~~--~~~~~~~~~~~--------~~~~~~i~~d~dg-~l~v~~~~--~gi~~ 57 (287)
++|| .||+++. ++.|..+| +++.......+ ..|. ++++++|| +||+++.. +.|.+
T Consensus 126 SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~-~~~~spDGk~lyV~n~~~~~~VsV 204 (426)
T 3c75_H 126 AEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQW-MNALTPDNKNLLFYQFSPAPAVGV 204 (426)
T ss_dssp CTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG-GSEECTTSSEEEEEECSSSCEEEE
T ss_pred CCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcc-eEEEcCCCCEEEEEecCCCCeEEE
Confidence 5677 6999872 45789999 45544333322 4577 99999999 58998743 46999
Q ss_pred Ec-cCC--cEEEeeecCCccccccce----EEEcCCCcEE-EEcCCCCC--------CCcc--------ee---eeeecc
Q 023085 58 VS-EDG--VENFLSYVNGSKLRFAND----VVEASDGSLY-FTVSSSKY--------LPHE--------YC---LDILEG 110 (287)
Q Consensus 58 ~~-~~g--~~~~~~~~~~~~~~~~~~----l~~d~~g~l~-v~~~~~~~--------~~~~--------~~---~~~~~~ 110 (287)
+| .++ ...+. . .+.....|.+ ++..++|.+. +.....+. .... +. ...+..
T Consensus 205 ID~~t~kvv~~I~-v-~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~ 282 (426)
T 3c75_H 205 VDLEGKTFDRMLD-V-PDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWP 282 (426)
T ss_dssp EETTTTEEEEEEE-C-CSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEE
T ss_pred EECCCCeEEEEEE-c-CCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEE
Confidence 99 666 33332 1 1100111222 5566677644 43311111 0000 00 001111
Q ss_pred CCCceEEEEeCCCCeeEEeec----------cccccce---EEEccCCCEEEEEeCC---------CCEEEEEEecCCCC
Q 023085 111 KPHGQLLKYDPSSNITTLVAD----------GFYFANG---VALSRDEDYVVVCESW---------KFRCRKYWLKGERK 168 (287)
Q Consensus 111 ~~~~~v~~~~~~~~~~~~~~~----------~~~~~~~---i~~~~~~~~l~v~~~~---------~~~l~~~~~~~~~~ 168 (287)
...+.|+.+|..++....... ....|.+ ++++++++.+|++... .+.|..+|....+.
T Consensus 283 s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv 362 (426)
T 3c75_H 283 TYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER 362 (426)
T ss_dssp BTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE
T ss_pred eCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE
Confidence 123456667665443322211 0012344 7899999999999742 34799999764322
Q ss_pred cceeEEeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcE
Q 023085 169 GKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTI 246 (287)
Q Consensus 169 ~~~~~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~ 246 (287)
...+ ..+..|.++++++||+ +++++... .+.|..+|.. ++.
T Consensus 363 --v~~I--~vg~~P~gia~spDg~~~lyv~n~~---------------------------------s~~VsVID~~t~kv 405 (426)
T 3c75_H 363 --INKI--ELGHEIDSINVSQDAEPLLYALSAG---------------------------------TQTLHIYDAATGEE 405 (426)
T ss_dssp --EEEE--EEEEEECEEEECCSSSCEEEEEETT---------------------------------TTEEEEEETTTCCE
T ss_pred --EEEE--ECCCCcCeEEEccCCCEEEEEEcCC---------------------------------CCeEEEEECCCCCE
Confidence 1111 1223599999999998 66665531 2589999965 677
Q ss_pred EEEE
Q 023085 247 IRNL 250 (287)
Q Consensus 247 ~~~~ 250 (287)
+..+
T Consensus 406 v~tI 409 (426)
T 3c75_H 406 LRSV 409 (426)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7676
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.72 E-value=8.1e-06 Score=76.17 Aligned_cols=245 Identities=14% Similarity=0.096 Sum_probs=131.7
Q ss_pred CCCCcEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCCCceEEEc-cC-----C-cEEEeeecCC
Q 023085 2 DKNGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-ED-----G-VENFLSYVNG 72 (287)
Q Consensus 2 d~~G~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~-----g-~~~~~~~~~~ 72 (287)
.+|+.+.++ .++.|+.++ +++............ .++++|||+..+......|+.++ .+ + ...+......
T Consensus 90 spd~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~-~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~ 167 (706)
T 2z3z_A 90 AGRGLVVLF-TQGGLVGFDMLARKVTYLFDTNEETA-SLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTE 167 (706)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTTEEEEEECCTTCCT-TCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBT
T ss_pred CCCCeEEEE-ECCEEEEEECCCCceEEccCCccccc-CCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCC
Confidence 345555555 458899998 555544444434445 88999999744444456788888 66 7 4443221111
Q ss_pred c----------cccccceEEEcCCCcEEEEcCCCCCCCcceeee-------------ee-c--cCCCceEEEEeCCCCee
Q 023085 73 S----------KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLD-------------IL-E--GKPHGQLLKYDPSSNIT 126 (287)
Q Consensus 73 ~----------~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~-------------~~-~--~~~~~~v~~~~~~~~~~ 126 (287)
. ....+.++++.++|+..++...-+-....+... .. . ......|+.+|..+++.
T Consensus 168 ~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~ 247 (706)
T 2z3z_A 168 TLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT 247 (706)
T ss_dssp TEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE
T ss_pred CeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce
Confidence 0 011257889999997444311000000000000 00 0 01235799999988876
Q ss_pred EEeecc---ccccceEEEccCCCEEEEEeCCC----CEEEEEEecCCCCcceeEEec-cCCC---CCcceeeCC--CCCE
Q 023085 127 TLVADG---FYFANGVALSRDEDYVVVCESWK----FRCRKYWLKGERKGKLETFAE-NLPG---APDNINLAP--DGTF 193 (287)
Q Consensus 127 ~~~~~~---~~~~~~i~~~~~~~~l~v~~~~~----~~l~~~~~~~~~~~~~~~~~~-~~~~---~~~~i~~d~--~G~l 193 (287)
..+... ...+..++|+|||+.|+++.... ..|+.+|.++++ ....... .... ....+++.+ +|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~--~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~ 325 (706)
T 2z3z_A 248 VYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR--FVRTLFVETDKHYVEPLHPLTFLPGSNNQF 325 (706)
T ss_dssp EECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC--EEEEEEEEECSSCCCCCSCCEECTTCSSEE
T ss_pred EeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc--eeeEEEEccCCCeECccCCceeecCCCCEE
Confidence 554322 23456788999999888865433 378888875431 1222211 1111 135678888 8875
Q ss_pred EEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEE-EEE--eCCE
Q 023085 194 WIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTS-GLQ--VDNH 270 (287)
Q Consensus 194 wv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~--~~g~ 270 (287)
.+++... ....|+.++.+++.+..+..... .+.. +.. +++.
T Consensus 326 l~~~~~~--------------------------------g~~~l~~~~~~~~~~~~l~~~~~----~v~~~~~~spdg~~ 369 (706)
T 2z3z_A 326 IWQSRRD--------------------------------GWNHLYLYDTTGRLIRQVTKGEW----EVTNFAGFDPKGTR 369 (706)
T ss_dssp EEEECTT--------------------------------SSCEEEEEETTSCEEEECCCSSS----CEEEEEEECTTSSE
T ss_pred EEEEccC--------------------------------CccEEEEEECCCCEEEecCCCCe----EEEeeeEEcCCCCE
Confidence 4444321 12467777777776666653221 1222 333 3456
Q ss_pred EEEEecCCC----eEEEEeC
Q 023085 271 LYVISLTSN----FIGKVQL 286 (287)
Q Consensus 271 l~i~~~~~~----~i~~~~~ 286 (287)
|++++...+ .|.++++
T Consensus 370 l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 370 LYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp EEEEESSSCTTCBEEEEEET
T ss_pred EEEEecCCCCceEEEEEEEc
Confidence 777766544 6666654
No 142
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.71 E-value=6.6e-06 Score=71.16 Aligned_cols=170 Identities=11% Similarity=0.070 Sum_probs=103.1
Q ss_pred CCCC-cEEEEecCCeEEEEE--CCceEEEEeeCCc----------------cccCeEECCCCcEEEEeCCCceEEEc-cC
Q 023085 2 DKNG-VIYTATRDGWIKRLQ--DGTWVNWKFIDSQ----------------TLVGLTSTKEGHLIICDNANGLHKVS-ED 61 (287)
Q Consensus 2 d~~G-~l~~~~~~g~i~~~~--~~~~~~~~~~~~~----------------~~~~i~~d~dg~l~v~~~~~gi~~~~-~~ 61 (287)
.++| .|+.++.++.|..|+ +++.......... .. .+.+.+++.++++...+.|..++ .+
T Consensus 158 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~i~~~d~~~ 236 (425)
T 1r5m_A 158 NKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGV-DVEWVDDDKFVIPGPKGAIFVYQITE 236 (425)
T ss_dssp CTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBS-CCEEEETTEEEEECGGGCEEEEETTC
T ss_pred CCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceee-EEEEcCCCEEEEEcCCCeEEEEEcCC
Confidence 3456 466777888999998 4443332222111 34 77888888888877656688888 65
Q ss_pred C--cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-eeccccccce
Q 023085 62 G--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFYFANG 138 (287)
Q Consensus 62 g--~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~ 138 (287)
+ ...+.. ....+..+++.+++.++++. ...+.|..++..+++... +.........
T Consensus 237 ~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~-----------------~~d~~i~i~d~~~~~~~~~~~~~~~~i~~ 294 (425)
T 1r5m_A 237 KTPTGKLIG-----HHGPISVLEFNDTNKLLLSA-----------------SDDGTLRIWHGGNGNSQNCFYGHSQSIVS 294 (425)
T ss_dssp SSCSEEECC-----CSSCEEEEEEETTTTEEEEE-----------------ETTSCEEEECSSSBSCSEEECCCSSCEEE
T ss_pred Cceeeeecc-----CCCceEEEEECCCCCEEEEE-----------------cCCCEEEEEECCCCccceEecCCCccEEE
Confidence 5 444321 12356788999988766642 234678888876554322 3223345577
Q ss_pred EEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 139 VALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 139 i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
++++|++ .++.+ ...+.|..|++...+ ....+. .....+..+++.++|++.++...
T Consensus 295 ~~~~~~~-~l~~~-~~d~~i~i~d~~~~~--~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~ 350 (425)
T 1r5m_A 295 ASWVGDD-KVISC-SMDGSVRLWSLKQNT--LLALSI-VDGVPIFAGRISQDGQKYAVAFM 350 (425)
T ss_dssp EEEETTT-EEEEE-ETTSEEEEEETTTTE--EEEEEE-CTTCCEEEEEECTTSSEEEEEET
T ss_pred EEECCCC-EEEEE-eCCCcEEEEECCCCc--EeEecc-cCCccEEEEEEcCCCCEEEEEEC
Confidence 8899988 44444 456789999975421 111221 12234567888888876555543
No 143
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.71 E-value=1.3e-05 Score=69.17 Aligned_cols=224 Identities=14% Similarity=0.121 Sum_probs=129.6
Q ss_pred CCCC-cEEEEecCCeEEEEE-CCceEEEEeeCCccccCeEECCCCcE-EEEeCCCceEEEc-cCC--cEEEeeecCCc--
Q 023085 2 DKNG-VIYTATRDGWIKRLQ-DGTWVNWKFIDSQTLVGLTSTKEGHL-IICDNANGLHKVS-EDG--VENFLSYVNGS-- 73 (287)
Q Consensus 2 d~~G-~l~~~~~~g~i~~~~-~~~~~~~~~~~~~~~~~i~~d~dg~l-~v~~~~~gi~~~~-~~g--~~~~~~~~~~~-- 73 (287)
.++| .|.+++.+|.|..|+ +++..........+...+++.+++++ +.+...+.+..++ .++ ...+.......
T Consensus 117 s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 196 (425)
T 1r5m_A 117 SHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSS 196 (425)
T ss_dssp CTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC------
T ss_pred cCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccc
Confidence 3456 466777888899998 55443333322233338899999974 4455445677788 666 33332111000
Q ss_pred --------cccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-eeccccccceEEEccC
Q 023085 74 --------KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFYFANGVALSRD 144 (287)
Q Consensus 74 --------~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~i~~~~~ 144 (287)
....+..+.+.+++.++++ ...+.|..++..+++... +.........++++|+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~ 258 (425)
T 1r5m_A 197 INAENHSGDGSLGVDVEWVDDDKFVIP------------------GPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDT 258 (425)
T ss_dssp ---------CCCBSCCEEEETTEEEEE------------------CGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETT
T ss_pred eeeccccCCcceeeEEEEcCCCEEEEE------------------cCCCeEEEEEcCCCceeeeeccCCCceEEEEECCC
Confidence 0011667777777766553 235678888887655332 2223344567889999
Q ss_pred CCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCcc
Q 023085 145 EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 224 (287)
Q Consensus 145 ~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (287)
++.++.+. ..+.|..|++...+. ...+. ........+++.++| +.++...
T Consensus 259 ~~~l~~~~-~d~~i~i~d~~~~~~--~~~~~-~~~~~i~~~~~~~~~-~l~~~~~------------------------- 308 (425)
T 1r5m_A 259 NKLLLSAS-DDGTLRIWHGGNGNS--QNCFY-GHSQSIVSASWVGDD-KVISCSM------------------------- 308 (425)
T ss_dssp TTEEEEEE-TTSCEEEECSSSBSC--SEEEC-CCSSCEEEEEEETTT-EEEEEET-------------------------
T ss_pred CCEEEEEc-CCCEEEEEECCCCcc--ceEec-CCCccEEEEEECCCC-EEEEEeC-------------------------
Confidence 98666665 456788888754321 12221 122345678888888 4443333
Q ss_pred ccccccCCCceEEEEECCC-CcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 225 FSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 225 ~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|..++.+ ++.+..+..... .+..+... ++++.+.....+.|.++++
T Consensus 309 ---------d~~i~i~d~~~~~~~~~~~~~~~----~i~~~~~s~~~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 309 ---------DGSVRLWSLKQNTLLALSIVDGV----PIFAGRISQDGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp ---------TSEEEEEETTTTEEEEEEECTTC----CEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred ---------CCcEEEEECCCCcEeEecccCCc----cEEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 2577778754 566666654332 45666665 4555555555667888775
No 144
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.70 E-value=8.3e-06 Score=70.83 Aligned_cols=222 Identities=12% Similarity=0.060 Sum_probs=127.7
Q ss_pred CCC-cEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEE-eCCCceEEEc-cCC--cEEEeeecCCccc
Q 023085 3 KNG-VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG--VENFLSYVNGSKL 75 (287)
Q Consensus 3 ~~G-~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~-~~g--~~~~~~~~~~~~~ 75 (287)
++| .|.+++.+|.|..|+ .++..........++..+++.+++++.++ ...+.|..++ .++ ...+... .
T Consensus 107 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h-----~ 181 (420)
T 3vl1_A 107 LQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGH-----R 181 (420)
T ss_dssp SSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECC-----S
T ss_pred cCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCC-----C
Confidence 455 466667888899998 44433322222223338899999975554 4334577788 666 4444221 2
Q ss_pred cccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeecc-----------------------
Q 023085 76 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG----------------------- 132 (287)
Q Consensus 76 ~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------------------- 132 (287)
..+.++++.+++..+++. ..++.|..+|..+++.......
T Consensus 182 ~~v~~~~~~~~~~~l~s~-----------------~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 244 (420)
T 3vl1_A 182 ATVTDIAIIDRGRNVLSA-----------------SLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHE 244 (420)
T ss_dssp SCEEEEEEETTTTEEEEE-----------------ETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGG
T ss_pred CcEEEEEEcCCCCEEEEE-----------------cCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeee
Confidence 357889999999876652 2345677777766654332211
Q ss_pred --ccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhh
Q 023085 133 --FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILN 209 (287)
Q Consensus 133 --~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~ 209 (287)
......++++|+++.++.+. ..+.|..||+.... ....+..........+++.++|. +.++...
T Consensus 245 ~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~---------- 311 (420)
T 3vl1_A 245 ISTSKKNNLEFGTYGKYVIAGH-VSGVITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAGYE---------- 311 (420)
T ss_dssp GCCCCCCTTCSSCTTEEEEEEE-TTSCEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEEET----------
T ss_pred cccCcccceEEcCCCCEEEEEc-CCCeEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEEeC----------
Confidence 01223456778888666655 45679999975431 12222211223466788999887 4444443
Q ss_pred cchhHHHHHHhCCccccccccCCCceEEEEECCC-C-cEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEeC
Q 023085 210 SSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-G-TIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g-~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|..++.+ + ..+..+....+ ..+..+...+++++++.-..+.|.++++
T Consensus 312 ------------------------dg~i~vwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 312 ------------------------NGMLAQWDLRSPECPVGEFLINEG---TPINNVYFAAGALFVSSGFDTSIKLDII 363 (420)
T ss_dssp ------------------------TSEEEEEETTCTTSCSEEEEESTT---SCEEEEEEETTEEEEEETTTEEEEEEEE
T ss_pred ------------------------CCeEEEEEcCCCcCchhhhhccCC---CCceEEEeCCCCEEEEecCCccEEEEec
Confidence 2567777754 3 33455543222 2355555556776666666667777664
No 145
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.68 E-value=1.8e-06 Score=74.04 Aligned_cols=178 Identities=11% Similarity=0.054 Sum_probs=96.9
Q ss_pred CCCCCcEEEEe-c------CCeEEEEE--CCce-----EEEEeeCCccccCeEECCCCcEEEEeCCCceEEEc-cCC-cE
Q 023085 1 MDKNGVIYTAT-R------DGWIKRLQ--DGTW-----VNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VE 64 (287)
Q Consensus 1 ~d~~G~l~~~~-~------~g~i~~~~--~~~~-----~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g-~~ 64 (287)
|.+||.+.++. . ++.|..|+ ++.. ........... .+++.+++++.++...+.|..++ .++ ..
T Consensus 50 fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~-~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~ 128 (357)
T 4g56_B 50 YRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVT-DVAWVSEKGILVASDSGAVELWEILEKESL 128 (357)
T ss_dssp ECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEE-EEEEETTTEEEEEETTSCEEEC--------
T ss_pred ECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEE-EEEEcCCCCEEEEECCCEEEEeecccccee
Confidence 35788655543 2 55677676 2211 11111122234 78889999988887555566666 444 21
Q ss_pred EEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee-ccccccceEEEcc
Q 023085 65 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSR 143 (287)
Q Consensus 65 ~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~i~~~~ 143 (287)
.............+.++++.++|...++. ...+.|..+|..+++..... ........+++++
T Consensus 129 ~~~~~~~~~h~~~V~~v~~spdg~~l~sg-----------------s~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~ 191 (357)
T 4g56_B 129 LVNKFAKYEHDDIVKTLSVFSDGTQAVSG-----------------GKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACP 191 (357)
T ss_dssp CCCCEEECCCSSCEEEEEECSSSSEEEEE-----------------ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred EEEeeccCCCCCCEEEEEECCCCCEEEEE-----------------eCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcc
Confidence 11111001112457889999999877752 23567888888877654433 3344567788999
Q ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCC-CEEEEE
Q 023085 144 DEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWIAI 197 (287)
Q Consensus 144 ~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G-~lwv~~ 197 (287)
+++.++++....+.|..||+..++........ .....+..+++.+++ ++.++.
T Consensus 192 ~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~~~v~~v~~sp~~~~~la~g 245 (357)
T 4g56_B 192 GKDTIFLSCGEDGRILLWDTRKPKPATRIDFC-ASDTIPTSVTWHPEKDDTFACG 245 (357)
T ss_dssp TCSSCEEEEETTSCEEECCTTSSSCBCBCCCT-TCCSCEEEEEECTTSTTEEEEE
T ss_pred CCCceeeeeccCCceEEEECCCCceeeeeeec-cccccccchhhhhcccceEEEe
Confidence 88766666666678888887543211111111 112235567777764 444443
No 146
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.67 E-value=3.3e-05 Score=65.35 Aligned_cols=177 Identities=12% Similarity=0.138 Sum_probs=99.8
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEE-eCCCceEEEc-cCC--cEEEeeecCCcc
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG--VENFLSYVNGSK 74 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~-~~g--~~~~~~~~~~~~ 74 (287)
.++|. |..++.+|.|..|+ +++..........+...+++.++++++++ ...+.|..++ .++ ...+. .
T Consensus 41 s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~----- 114 (369)
T 3zwl_B 41 NKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-S----- 114 (369)
T ss_dssp CTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-C-----
T ss_pred cCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-c-----
Confidence 45664 66667888999998 45443333222223338899999976555 4334577788 666 33332 1
Q ss_pred ccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe------------eEEeeccc--cccceEE
Q 023085 75 LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI------------TTLVADGF--YFANGVA 140 (287)
Q Consensus 75 ~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------------~~~~~~~~--~~~~~i~ 140 (287)
...+..+++.+++..+++.... .....+.|..++..++. ...+.... .....++
T Consensus 115 ~~~v~~~~~~~~~~~l~~~~~~------------~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (369)
T 3zwl_B 115 PVPVKRVEFSPCGNYFLAILDN------------VMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAG 182 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEECC------------BTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEE
T ss_pred CCCeEEEEEccCCCEEEEecCC------------ccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEE
Confidence 2356788999998876642110 00112455555543221 11111111 1456788
Q ss_pred EccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 141 LSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 141 ~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
++|+++.++++. ..+.|..|++.... .....+. ........++++++|++.++...
T Consensus 183 ~~~~~~~l~~~~-~dg~i~i~d~~~~~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~ 238 (369)
T 3zwl_B 183 WSTKGKYIIAGH-KDGKISKYDVSNNY-EYVDSID-LHEKSISDMQFSPDLTYFITSSR 238 (369)
T ss_dssp ECGGGCEEEEEE-TTSEEEEEETTTTT-EEEEEEE-CCSSCEEEEEECTTSSEEEEEET
T ss_pred EcCCCCEEEEEc-CCCEEEEEECCCCc-EeEEEEe-cCCCceeEEEECCCCCEEEEecC
Confidence 999999777665 45789999975421 1122222 22234677889999876665544
No 147
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.66 E-value=1e-05 Score=70.05 Aligned_cols=229 Identities=7% Similarity=0.020 Sum_probs=131.8
Q ss_pred CCCC-cEEEEecCCeEEEEE-CC----c-eEE-EEeeCCccccCeEECCC-CcEEEEeCC-CceEEEc-cCCc------E
Q 023085 2 DKNG-VIYTATRDGWIKRLQ-DG----T-WVN-WKFIDSQTLVGLTSTKE-GHLIICDNA-NGLHKVS-EDGV------E 64 (287)
Q Consensus 2 d~~G-~l~~~~~~g~i~~~~-~~----~-~~~-~~~~~~~~~~~i~~d~d-g~l~v~~~~-~gi~~~~-~~g~------~ 64 (287)
.++| .|..++.+|.|..|+ .. . ... +........ .+++.++ ++++++... +.|..++ .++. .
T Consensus 76 s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 154 (416)
T 2pm9_A 76 SHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVK-TVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYT 154 (416)
T ss_dssp CSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCC-EEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCC
T ss_pred CCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceE-EEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccc
Confidence 3456 466777888999998 32 1 221 222222334 7889988 665555433 4566676 4332 2
Q ss_pred EEeeecCCccccccceEEEcCC-CcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeecc-------cccc
Q 023085 65 NFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-------FYFA 136 (287)
Q Consensus 65 ~~~~~~~~~~~~~~~~l~~d~~-g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-------~~~~ 136 (287)
.+...........+.++++.++ +.++++. ...+.|..+|..+++....... ....
T Consensus 155 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-----------------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v 217 (416)
T 2pm9_A 155 PLTPGQSMSSVDEVISLAWNQSLAHVFASA-----------------GSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQL 217 (416)
T ss_dssp CBCCCCSCCSSCCCCEEEECSSCTTEEEEE-----------------SSSSCEEEEETTTTEEEEEECCCCCSSCCCCCE
T ss_pred ccccccccCCCCCeeEEEeCCCCCcEEEEE-----------------cCCCCEEEEECCCCCcceEEeccccccccCCce
Confidence 2211111112346788999998 5776652 2356788888877665433222 3446
Q ss_pred ceEEEccCCCEEEEEeCCCC---EEEEEEecCCCCcceeEEeccCCCCCcceeeCC-CCCEEEEEeccchhHHHHhhcch
Q 023085 137 NGVALSRDEDYVVVCESWKF---RCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSK 212 (287)
Q Consensus 137 ~~i~~~~~~~~l~v~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~ 212 (287)
..++++|++..++++....+ .|..|++...... ...+.......+..+++.+ ++++.++...
T Consensus 218 ~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~------------- 283 (416)
T 2pm9_A 218 SVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP-LQTLNQGHQKGILSLDWCHQDEHLLLSSGR------------- 283 (416)
T ss_dssp EEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC-SBCCCSCCSSCEEEEEECSSCSSCEEEEES-------------
T ss_pred EEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC-cEEeecCccCceeEEEeCCCCCCeEEEEeC-------------
Confidence 77899999754444444455 8999997642111 1111101122456788888 7776666554
Q ss_pred hHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCCccccceEEEEEe-CC-EEEEEecCCCeEEEEeCC
Q 023085 213 LIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV-DN-HLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~g-~l~i~~~~~~~i~~~~~~ 287 (287)
.+.|..++.+ ++.+..+....+ .+..+... ++ .++++.-..+.|.++++.
T Consensus 284 ---------------------dg~v~~wd~~~~~~~~~~~~~~~----~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 284 ---------------------DNTVLLWNPESAEQLSQFPARGN----WCFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp ---------------------SSEEEEECSSSCCEEEEEECSSS----CCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred ---------------------CCCEEEeeCCCCccceeecCCCC----ceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 3577788854 667777764332 35556654 44 566666667788887763
No 148
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.65 E-value=1.9e-05 Score=69.59 Aligned_cols=139 Identities=10% Similarity=0.100 Sum_probs=82.6
Q ss_pred CeEECCCCcEE-EEeCC-CceEEEc-c--CC--cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeec
Q 023085 37 GLTSTKEGHLI-ICDNA-NGLHKVS-E--DG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILE 109 (287)
Q Consensus 37 ~i~~d~dg~l~-v~~~~-~gi~~~~-~--~g--~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~ 109 (287)
.+++.++|+.+ ++... +.|..++ . ++ ...+.... ....+.++++.++|...++
T Consensus 107 ~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~~----------------- 166 (450)
T 2vdu_B 107 NLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFC---FSKRPNAISIAEDDTTVII----------------- 166 (450)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEE---CSSCEEEEEECTTSSEEEE-----------------
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeeccc---CCCCceEEEEcCCCCEEEE-----------------
Confidence 78889999864 44323 4466666 5 55 44432211 1235788999999976664
Q ss_pred cCCCceEEEEeCCCCeeE-----EeeccccccceEEEccC---CCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCC
Q 023085 110 GKPHGQLLKYDPSSNITT-----LVADGFYFANGVALSRD---EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGA 181 (287)
Q Consensus 110 ~~~~~~v~~~~~~~~~~~-----~~~~~~~~~~~i~~~~~---~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 181 (287)
+...+.++.++..+++.. .+.........++++|+ ++.|+.+. ..+.|..|++..... ...+...-.+.
T Consensus 167 ~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~-~d~~i~vwd~~~~~~--~~~~~~~h~~~ 243 (450)
T 2vdu_B 167 ADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSD-RDEHIKISHYPQCFI--VDKWLFGHKHF 243 (450)
T ss_dssp EETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEE-TTSCEEEEEESCTTC--EEEECCCCSSC
T ss_pred EeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEc-CCCcEEEEECCCCce--eeeeecCCCCc
Confidence 123567888887655432 12222344567889999 76555554 567899999864321 22222122234
Q ss_pred CcceeeCCCCCEEEEEec
Q 023085 182 PDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 182 ~~~i~~d~~G~lwv~~~~ 199 (287)
+..+++. +|++.++...
T Consensus 244 v~~~~~s-d~~~l~s~~~ 260 (450)
T 2vdu_B 244 VSSICCG-KDYLLLSAGG 260 (450)
T ss_dssp EEEEEEC-STTEEEEEES
T ss_pred eEEEEEC-CCCEEEEEeC
Confidence 6778888 8876665544
No 149
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.63 E-value=4.2e-05 Score=65.19 Aligned_cols=221 Identities=10% Similarity=0.057 Sum_probs=126.0
Q ss_pred CCCcEEEEecCCeEEEEE--CCceEE-EE--e-eCCccccCeEECCCCcEEEE-eCCCceEEEc-cCC--cEEEeeecCC
Q 023085 3 KNGVIYTATRDGWIKRLQ--DGTWVN-WK--F-IDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG--VENFLSYVNG 72 (287)
Q Consensus 3 ~~G~l~~~~~~g~i~~~~--~~~~~~-~~--~-~~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~-~~g--~~~~~~~~~~ 72 (287)
+++.|..++.+|.|..|+ +++... .. . ....++..+++.++|++.++ ...+.|..++ .++ +..+..
T Consensus 92 ~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~---- 167 (344)
T 4gqb_B 92 GERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA---- 167 (344)
T ss_dssp TTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC----
T ss_pred CCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC----
Confidence 567788888999999998 443222 11 1 11223338899999986665 4334577777 666 333321
Q ss_pred ccccccceEEEcCCC-cEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee---ccccccceEEEccCCCEE
Q 023085 73 SKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA---DGFYFANGVALSRDEDYV 148 (287)
Q Consensus 73 ~~~~~~~~l~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~l 148 (287)
....+..+++.+++ .++++. ..++.|..+|..+++..... ........++++|++..+
T Consensus 168 -h~~~V~~~~~~~~~~~~l~s~-----------------s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 229 (344)
T 4gqb_B 168 -HAAQVTCVAASPHKDSVFLSC-----------------SEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEV 229 (344)
T ss_dssp -CSSCEEEEEECSSCTTEEEEE-----------------ETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTE
T ss_pred -cCCceEEEEecCCCCCceeee-----------------ccccccccccccccceeeeeecceeeccceeeeecCCCCcc
Confidence 12457788898877 566652 23567888888766543322 112235678888876556
Q ss_pred EEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHHhCCccccc
Q 023085 149 VVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQ 227 (287)
Q Consensus 149 ~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
+++....+.|..||+...+. ...+. .-......+++.++|. +.++...
T Consensus 230 l~sg~~dg~v~~wd~~~~~~--~~~~~-~h~~~v~~v~fsp~g~~~lasgs~---------------------------- 278 (344)
T 4gqb_B 230 FVFGDENGTVSLVDTKSTSC--VLSSA-VHSQCVTGLVFSPHSVPFLASLSE---------------------------- 278 (344)
T ss_dssp EEEEETTSEEEEEESCC--C--CEEEE-CCSSCEEEEEECSSSSCCEEEEET----------------------------
T ss_pred eEEeccCCcEEEEECCCCcE--EEEEc-CCCCCEEEEEEccCCCeEEEEEeC----------------------------
Confidence 66656678899999764321 12222 1122356788888884 3333332
Q ss_pred cccCCCceEEEEECCCCcEEEEEECCCCccccceEEEEEe--CCEEEEEecCCCeEEEEeC
Q 023085 228 FITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 228 ~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|..+|.+...+..+... ...+.++... +.+|..+.-.-..|.+.++
T Consensus 279 ------D~~i~vwd~~~~~~~~~~~H----~~~V~~v~~sp~~~~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 279 ------DCSLAVLDSSLSELFRSQAH----RDFVRDATWSPLNHSLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp ------TSCEEEECTTCCEEEEECCC----SSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred ------CCeEEEEECCCCcEEEEcCC----CCCEEEEEEeCCCCeEEEEEcCCCeEEEEEC
Confidence 24566777665544443321 2346677664 3456544333445555544
No 150
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.63 E-value=7.7e-06 Score=66.90 Aligned_cols=171 Identities=12% Similarity=0.049 Sum_probs=98.9
Q ss_pred CCCCcEEEEecCCeEEEEE--C-CceEEEEeeC--CccccCeEECCCCcEEEEeC-----CCceEEEc-cCC-cEEEeee
Q 023085 2 DKNGVIYTATRDGWIKRLQ--D-GTWVNWKFID--SQTLVGLTSTKEGHLIICDN-----ANGLHKVS-EDG-VENFLSY 69 (287)
Q Consensus 2 d~~G~l~~~~~~g~i~~~~--~-~~~~~~~~~~--~~~~~~i~~d~dg~l~v~~~-----~~gi~~~~-~~g-~~~~~~~ 69 (287)
.++|...+...++.|+.++ + ++........ .... .+++.+||+.++... ...|+.++ .++ ...+...
T Consensus 50 spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 128 (297)
T 2ojh_A 50 SPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNN-DHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN 128 (297)
T ss_dssp CTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCS-CCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS
T ss_pred CCCCCEEEEEcCCeEEEEeCCCCCCceEecccccccccc-ceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecC
Confidence 4678644444578899999 4 5554443222 2334 789999997544432 23588887 455 4443221
Q ss_pred cCCccccccceEEEcCCCcE-EEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEE
Q 023085 70 VNGSKLRFANDVVEASDGSL-YFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYV 148 (287)
Q Consensus 70 ~~~~~~~~~~~l~~d~~g~l-~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 148 (287)
..+..+++.++|.. +++... .....||.++..+++...+.........++++|+++.+
T Consensus 129 ------~~~~~~~~spdg~~l~~~~~~---------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 187 (297)
T 2ojh_A 129 ------LPSYWHGWSPDGKSFTYCGIR---------------DQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWI 187 (297)
T ss_dssp ------SSEEEEEECTTSSEEEEEEEE---------------TTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEE
T ss_pred ------CCccceEECCCCCEEEEEECC---------------CCceEEEEEECCCCcceEcccCCCccccceECCCCCEE
Confidence 13566788888874 433110 12236888888767666555444556788999999988
Q ss_pred EEEeCCC--CEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCE-EEEEe
Q 023085 149 VVCESWK--FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTF-WIAII 198 (287)
Q Consensus 149 ~v~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l-wv~~~ 198 (287)
+++.... ..|+.++.++.. ...+. ........++++++|+. .+++.
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~~---~~~~~-~~~~~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 188 YFNSSRTGQMQIWRVRVDGSS---VERIT-DSAYGDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp EEEECTTSSCEEEEEETTSSC---EEECC-CCSEEEEEEEECTTSSEEEEEEE
T ss_pred EEEecCCCCccEEEECCCCCC---cEEEe-cCCcccCCeEECCCCCEEEEEEc
Confidence 8776433 456665543321 22221 11123445778899874 44443
No 151
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.63 E-value=1.2e-05 Score=69.41 Aligned_cols=211 Identities=16% Similarity=0.107 Sum_probs=117.2
Q ss_pred CCCC-cEEEEec----------CCeEEEEE--CCceEEEEeeC--------CccccCeEECCCCc-EEEEeC--CCceEE
Q 023085 2 DKNG-VIYTATR----------DGWIKRLQ--DGTWVNWKFID--------SQTLVGLTSTKEGH-LIICDN--ANGLHK 57 (287)
Q Consensus 2 d~~G-~l~~~~~----------~g~i~~~~--~~~~~~~~~~~--------~~~~~~i~~d~dg~-l~v~~~--~~gi~~ 57 (287)
++|| .||+++. .+.|..+| +++.......+ ..|. ++++++||+ ||+++. .+.|..
T Consensus 86 spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~-~~a~spDGk~lyVan~~~~~~VsV 164 (386)
T 3sjl_D 86 ADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPW-MTSLTPDGKTLLFYQFSPAPAVGV 164 (386)
T ss_dssp CTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG-GEEECTTSSEEEEEECSSSCEEEE
T ss_pred CCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCc-eEEEcCCCCEEEEEEcCCCCeEEE
Confidence 5677 6999862 35688898 45543333222 2677 999999995 899974 356899
Q ss_pred Ec-cCC--cEEEeeecCCccccccce----EEEcCCCcEEEEcCC--CCC--------CCc--------cee---eeeec
Q 023085 58 VS-EDG--VENFLSYVNGSKLRFAND----VVEASDGSLYFTVSS--SKY--------LPH--------EYC---LDILE 109 (287)
Q Consensus 58 ~~-~~g--~~~~~~~~~~~~~~~~~~----l~~d~~g~l~v~~~~--~~~--------~~~--------~~~---~~~~~ 109 (287)
+| .++ ...+. . .+.....|.+ ++..++|.+.+.+.. ++. ... .|. ...++
T Consensus 165 ID~~t~~vv~tI~-v-~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~ 242 (386)
T 3sjl_D 165 VDLEGKAFKRMLD-V-PDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW 242 (386)
T ss_dssp EETTTTEEEEEEE-C-CSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE
T ss_pred EECCCCcEEEEEE-C-CCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE
Confidence 99 676 44442 1 1111112222 355567765443222 221 000 010 01111
Q ss_pred cCCCceEEEEeCCCCeeEEeecc----------cccc---ceEEEccCCCEEEEEeC---------CCCEEEEEEecCCC
Q 023085 110 GKPHGQLLKYDPSSNITTLVADG----------FYFA---NGVALSRDEDYVVVCES---------WKFRCRKYWLKGER 167 (287)
Q Consensus 110 ~~~~~~v~~~~~~~~~~~~~~~~----------~~~~---~~i~~~~~~~~l~v~~~---------~~~~l~~~~~~~~~ 167 (287)
.+..+.|+.+|..++..+..... .-.| ..++++++++.+|++.. .++.|+.+|....+
T Consensus 243 vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k 322 (386)
T 3sjl_D 243 PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE 322 (386)
T ss_dssp EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC
T ss_pred EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe
Confidence 22234566677654432221110 0112 23778999999999863 13579999976543
Q ss_pred CcceeEEeccCCCCCcceeeCCCCC--EEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-C
Q 023085 168 KGKLETFAENLPGAPDNINLAPDGT--FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-G 244 (287)
Q Consensus 168 ~~~~~~~~~~~~~~~~~i~~d~~G~--lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g 244 (287)
..+ .+. ....|.++++++||+ ||+++.. .+.|..+|.. +
T Consensus 323 v~~--~i~--vg~~~~~lavs~D~~~~ly~tn~~----------------------------------~~~VsViD~~t~ 364 (386)
T 3sjl_D 323 RLA--KFE--MGHEIDSINVSQDEKPLLYALSTG----------------------------------DKTLYIHDAESG 364 (386)
T ss_dssp EEE--EEE--EEEEECEEEECSSSSCEEEEEETT----------------------------------TTEEEEEETTTC
T ss_pred EEE--EEE--CCCCcceEEECCCCCeEEEEEcCC----------------------------------CCeEEEEECCCC
Confidence 221 111 112478999999986 4555543 2578889864 7
Q ss_pred cEEEEEECC
Q 023085 245 TIIRNLVDP 253 (287)
Q Consensus 245 ~~~~~~~~~ 253 (287)
+.+..+..+
T Consensus 365 k~~~~i~~~ 373 (386)
T 3sjl_D 365 EELRSVNQL 373 (386)
T ss_dssp CEEEEECCC
T ss_pred cEEEEecCC
Confidence 888888754
No 152
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.62 E-value=6.1e-05 Score=63.79 Aligned_cols=218 Identities=10% Similarity=0.033 Sum_probs=127.7
Q ss_pred CCCc-EEEEecCCeEEEEE--CC--ceEEEEe---eCCccccCeEECCCCcEEEEeCCCceEEEc-cCC--cEEEeeecC
Q 023085 3 KNGV-IYTATRDGWIKRLQ--DG--TWVNWKF---IDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLSYVN 71 (287)
Q Consensus 3 ~~G~-l~~~~~~g~i~~~~--~~--~~~~~~~---~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g--~~~~~~~~~ 71 (287)
++|. |..++.++.|..|+ .+ ....... ...... .+.+.+++.+..+...+.|..++ .++ ...+..
T Consensus 107 ~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~--- 182 (340)
T 1got_B 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLS-CCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTG--- 182 (340)
T ss_dssp TTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEE-EEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC---
T ss_pred CCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEE-EEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcC---
Confidence 4554 45566788888888 22 1111111 112223 56667788877776556677788 666 333321
Q ss_pred CccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-eeccccccceEEEccCCCEEEE
Q 023085 72 GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFYFANGVALSRDEDYVVV 150 (287)
Q Consensus 72 ~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~l~v 150 (287)
....+.++++.+++.++++. ..++.|..+|..+++... +.........++++|+++.+..
T Consensus 183 --h~~~v~~~~~~~~~~~l~sg-----------------~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 243 (340)
T 1got_B 183 --HTGDVMSLSLAPDTRLFVSG-----------------ACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFAT 243 (340)
T ss_dssp --CSSCEEEEEECTTSSEEEEE-----------------ETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred --CCCceEEEEECCCCCEEEEE-----------------eCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEE
Confidence 12357889999999888752 235678888877665433 3333445678899999986655
Q ss_pred EeCCCCEEEEEEecCCCCcceeEEecc-CCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccc
Q 023085 151 CESWKFRCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFI 229 (287)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
+. ..+.|..||+...+ ....+... .......+++.++|++.++...
T Consensus 244 ~s-~d~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~------------------------------ 290 (340)
T 1got_B 244 GS-DDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYD------------------------------ 290 (340)
T ss_dssp EE-TTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEET------------------------------
T ss_pred Ec-CCCcEEEEECCCCc--EEEEEccCCcccceEEEEECCCCCEEEEECC------------------------------
Confidence 54 56789999875321 11222111 1113456788999987777665
Q ss_pred cCCCceEEEEECC-CCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEE
Q 023085 230 TLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKV 284 (287)
Q Consensus 230 ~~~~~~~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~ 284 (287)
.+.|..++. .++.+..+....+ .+.++... ++++.+++-....|.+.
T Consensus 291 ----d~~i~vwd~~~~~~~~~~~~h~~----~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 291 ----DFNCNVWDALKADRAGVLAGHDN----RVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp ----TSEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred ----CCeEEEEEcccCcEeeEeecCCC----cEEEEEEcCCCCEEEEEcCCccEEec
Confidence 356777774 4666666664332 46667665 45443433333445443
No 153
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.60 E-value=4.3e-05 Score=66.60 Aligned_cols=140 Identities=11% Similarity=0.093 Sum_probs=87.3
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCceEEEEee-CCccccCeEECCCCcEEEEeCC-CceEEEc-cCC--cEEEeeecCCc
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTWVNWKFI-DSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VENFLSYVNGS 73 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~~~~~~~-~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~-~~g--~~~~~~~~~~~ 73 (287)
.+++. |..++.+|.|..|+ +++....... ..... .+++.++|++.++... +.|..++ .++ +..+. +
T Consensus 117 ~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~-~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~----~- 190 (410)
T 1vyh_C 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQ-DISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH----G- 190 (410)
T ss_dssp CSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEE-EEEECTTSSEEEEEETTSCCCEEETTSSCEEECCC----C-
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEE-EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEc----C-
Confidence 34554 55566889999999 5554433322 22334 8899999986655433 4466666 444 22221 1
Q ss_pred cccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCee-EEeeccccccceEEEccCCCEEEEEe
Q 023085 74 KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT-TLVADGFYFANGVALSRDEDYVVVCE 152 (287)
Q Consensus 74 ~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~l~v~~ 152 (287)
....+.++++.++|..+++. ..++.|..+|..++.. ..+.........+.++++++.+..+.
T Consensus 191 h~~~V~~v~~~p~~~~l~s~-----------------s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s 253 (410)
T 1vyh_C 191 HDHNVSSVSIMPNGDHIVSA-----------------SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEE-----------------ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCEEEEEEeCCCCEEEEE-----------------eCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEc
Confidence 12467889999999877752 3456788888876653 33333344556778899998555554
Q ss_pred CCCCEEEEEEecC
Q 023085 153 SWKFRCRKYWLKG 165 (287)
Q Consensus 153 ~~~~~l~~~~~~~ 165 (287)
..+.|..|++..
T Consensus 254 -~D~~v~vwd~~~ 265 (410)
T 1vyh_C 254 -NDQTVRVWVVAT 265 (410)
T ss_dssp -TTSCEEEEETTT
T ss_pred -CCCeEEEEECCC
Confidence 567788888754
No 154
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.58 E-value=3.3e-05 Score=66.32 Aligned_cols=192 Identities=13% Similarity=0.113 Sum_probs=102.5
Q ss_pred CCCCc-EEEEec-CC--eEEEEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeCCCceEEEc-cCC-cEEEeeecCC
Q 023085 2 DKNGV-IYTATR-DG--WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVS-EDG-VENFLSYVNG 72 (287)
Q Consensus 2 d~~G~-l~~~~~-~g--~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~~gi~~~~-~~g-~~~~~~~~~~ 72 (287)
.+||. |.+.+. ++ .|+.++ +++.............+.++.+||+ |+++.....|++++ .++ ...+......
T Consensus 44 SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~ 123 (388)
T 3pe7_A 44 TRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAE 123 (388)
T ss_dssp CTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT
T ss_pred CCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhh
Confidence 46774 666665 44 488888 5555544433332221578999995 66665455799999 666 4444332111
Q ss_pred ccccccceEEEcCCCcEEEEcCC--CCCC-Cccee--eeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEcc-CCC
Q 023085 73 SKLRFANDVVEASDGSLYFTVSS--SKYL-PHEYC--LDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSR-DED 146 (287)
Q Consensus 73 ~~~~~~~~l~~d~~g~l~v~~~~--~~~~-~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~ 146 (287)
.........+++|.+.++... .++. ...|. .+.........|+.+|..+++...+.........+.++| |++
T Consensus 124 --~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~ 201 (388)
T 3pe7_A 124 --WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDS 201 (388)
T ss_dssp --EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEE
T ss_pred --cccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCC
Confidence 001112234677876653110 0000 00000 000111234679999998888776655444557788999 998
Q ss_pred EEEEEeCC-----CCEEEEEEecCCCCcceeEEeccCCC-CCcceeeCCCCC-EEEEEe
Q 023085 147 YVVVCESW-----KFRCRKYWLKGERKGKLETFAENLPG-APDNINLAPDGT-FWIAII 198 (287)
Q Consensus 147 ~l~v~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~d~~G~-lwv~~~ 198 (287)
.|.++... ...|+.++.++... ..+.....+ .....++.+||+ |...+.
T Consensus 202 ~l~~~~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (388)
T 3pe7_A 202 TVAFCHEGPHDLVDARMWLINEDGTNM---RKVKTHAEGESCTHEFWVPDGSALVYVSY 257 (388)
T ss_dssp EEEEEECSCTTTSSCSEEEEETTSCCC---EESCCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred EEEEEEecCCCCCcceEEEEeCCCCce---EEeeeCCCCcccccceECCCCCEEEEEec
Confidence 77665543 33788888754321 111111110 123467889986 544443
No 155
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.58 E-value=0.00013 Score=60.68 Aligned_cols=141 Identities=9% Similarity=0.052 Sum_probs=85.8
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEE-eCCCceEEEc-cCC--cEEEeeecCCcc
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG--VENFLSYVNGSK 74 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~-~~g--~~~~~~~~~~~~ 74 (287)
.++|. |..++.+|.|..|+ ++...........+...+.+.+++++.++ ...+.|..++ .++ ...+.. .
T Consensus 22 sp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~-----h 96 (304)
T 2ynn_A 22 HPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA-----H 96 (304)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC-----C
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeC-----C
Confidence 46775 55666889999999 44433322222233337788888876555 4334577777 666 333321 1
Q ss_pred ccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCC-eeEE-eeccccccceEEEccC-CCEEEEE
Q 023085 75 LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-ITTL-VADGFYFANGVALSRD-EDYVVVC 151 (287)
Q Consensus 75 ~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~-~~~~~~~~~~i~~~~~-~~~l~v~ 151 (287)
...+.++++.+++.+.++. ..++.|..+|..++ .... +.........++++|+ +. ++++
T Consensus 97 ~~~v~~~~~~~~~~~l~sg-----------------s~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-~l~s 158 (304)
T 2ynn_A 97 PDYIRSIAVHPTKPYVLSG-----------------SDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS-TFAS 158 (304)
T ss_dssp SSCEEEEEECSSSSEEEEE-----------------ETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTT-EEEE
T ss_pred CCcEEEEEEcCCCCEEEEE-----------------CCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCC-EEEE
Confidence 2457889999999877752 23566777776544 3322 2233344577889984 55 4455
Q ss_pred eCCCCEEEEEEecC
Q 023085 152 ESWKFRCRKYWLKG 165 (287)
Q Consensus 152 ~~~~~~l~~~~~~~ 165 (287)
....+.|..||+..
T Consensus 159 gs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 159 GCLDRTVKVWSLGQ 172 (304)
T ss_dssp EETTSEEEEEETTC
T ss_pred EeCCCeEEEEECCC
Confidence 55667899999753
No 156
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.57 E-value=0.00017 Score=62.39 Aligned_cols=222 Identities=13% Similarity=0.084 Sum_probs=123.1
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCceEEEEee-CCccccCeEECCCCcEEEE-eCCCceEEEc-cCC-cEEEeeecCCcc
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTWVNWKFI-DSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG-VENFLSYVNGSK 74 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~~~~~~~-~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~-~~g-~~~~~~~~~~~~ 74 (287)
.++|. |..++.++.|..|+ +++....... ..... .+++.++++..++ ...+.|..++ +++ .......
T Consensus 132 s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~----- 205 (393)
T 1erj_A 132 SPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIY-SLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI----- 205 (393)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-----
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEE-EEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEc-----
Confidence 35664 55666888899999 4443333222 22334 7889999975555 4334567777 666 3222111
Q ss_pred ccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee--------ccccccceEEEccCC
Q 023085 75 LRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--------DGFYFANGVALSRDE 145 (287)
Q Consensus 75 ~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--------~~~~~~~~i~~~~~~ 145 (287)
...+..+++.+ +|.++++. ..++.|..+|..+++..... ........++++|++
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~-----------------s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g 268 (393)
T 1erj_A 206 EDGVTTVAVSPGDGKYIAAG-----------------SLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG 268 (393)
T ss_dssp SSCEEEEEECSTTCCEEEEE-----------------ETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTS
T ss_pred CCCcEEEEEECCCCCEEEEE-----------------cCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCC
Confidence 12456778887 77777652 23466777887766543221 112335678899999
Q ss_pred CEEEEEeCCCCEEEEEEecCCCC---------ccee-EEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHH
Q 023085 146 DYVVVCESWKFRCRKYWLKGERK---------GKLE-TFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIK 215 (287)
Q Consensus 146 ~~l~v~~~~~~~l~~~~~~~~~~---------~~~~-~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~ 215 (287)
+.|+.+. ..+.|..|++..... .... .+. .-......+++.+++.+.++...
T Consensus 269 ~~l~s~s-~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~---------------- 330 (393)
T 1erj_A 269 QSVVSGS-LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI-GHKDFVLSVATTQNDEYILSGSK---------------- 330 (393)
T ss_dssp SEEEEEE-TTSEEEEEEC---------------CEEEEEE-CCSSCEEEEEECGGGCEEEEEET----------------
T ss_pred CEEEEEe-CCCEEEEEECCCCCCcccccCCCCCcceEEEe-cccCcEEEEEECCCCCEEEEEeC----------------
Confidence 8665554 567888898753211 0000 111 11122445777777765555443
Q ss_pred HHHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCCccccceEEEEEe-------CCEEEEEecCCCeEEEEeC
Q 023085 216 HVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV-------DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~-------~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|..++.+ ++.+..+....+ .+.++... ++.+++++-....|.+.++
T Consensus 331 ------------------D~~v~iwd~~~~~~~~~l~~h~~----~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 331 ------------------DRGVLFWDKKSGNPLLMLQGHRN----SVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp ------------------TSEEEEEETTTCCEEEEEECCSS----CEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred ------------------CCeEEEEECCCCeEEEEECCCCC----CEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 3567777754 666666654332 34555543 3556565555556666553
No 157
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.57 E-value=3.1e-05 Score=66.41 Aligned_cols=177 Identities=10% Similarity=0.016 Sum_probs=107.1
Q ss_pred CCCC--cEEEEecCCeEEEEE--CCceEEEEe---eCCccccCeEECC-CCcEEEE-eCCCceEEEc-cCC-cEEEeeec
Q 023085 2 DKNG--VIYTATRDGWIKRLQ--DGTWVNWKF---IDSQTLVGLTSTK-EGHLIIC-DNANGLHKVS-EDG-VENFLSYV 70 (287)
Q Consensus 2 d~~G--~l~~~~~~g~i~~~~--~~~~~~~~~---~~~~~~~~i~~d~-dg~l~v~-~~~~gi~~~~-~~g-~~~~~~~~ 70 (287)
.++| .|..++.+|.|..|+ +++...... ...... .+++.+ +++++++ ...+.|..++ .+. ...+....
T Consensus 82 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 160 (383)
T 3ei3_B 82 HPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAIT-GMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTD 160 (383)
T ss_dssp CSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEE-EEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCC
T ss_pred CCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCcee-EEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccC
Confidence 3455 566777889999999 444444332 222334 788888 5554444 4444577777 444 44443221
Q ss_pred CCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEE
Q 023085 71 NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVV 150 (287)
Q Consensus 71 ~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v 150 (287)
.....+..+++.+++.++++ +...+.|..+|.....+..+.........++++|+++.+++
T Consensus 161 --~~~~~v~~~~~~~~~~~l~~-----------------~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 221 (383)
T 3ei3_B 161 --SWDYWYCCVDVSVSRQMLAT-----------------GDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMA 221 (383)
T ss_dssp --CSSCCEEEEEEETTTTEEEE-----------------EETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEE
T ss_pred --CCCCCeEEEEECCCCCEEEE-----------------ECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEE
Confidence 11235778999999987765 23456788888864455555444556778999999984444
Q ss_pred EeCCCCEEEEEEecCCCC-cceeEEeccCCCCCcceeeCC-CCCEEEEEec
Q 023085 151 CESWKFRCRKYWLKGERK-GKLETFAENLPGAPDNINLAP-DGTFWIAIIK 199 (287)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~d~-~G~lwv~~~~ 199 (287)
+....+.|..||+..... ....... ........+++++ +|++.++...
T Consensus 222 s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~ 271 (383)
T 3ei3_B 222 TSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQ 271 (383)
T ss_dssp EEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEES
T ss_pred EEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcC
Confidence 444567899999864221 1121111 2233467788999 8876665543
No 158
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.57 E-value=5.7e-05 Score=66.13 Aligned_cols=178 Identities=13% Similarity=0.130 Sum_probs=101.2
Q ss_pred CCCcEEEEec-C------CeEEEEE--CCceEEEEeeCC----ccccCeEECCCCcEEEEeC------------------
Q 023085 3 KNGVIYTATR-D------GWIKRLQ--DGTWVNWKFIDS----QTLVGLTSTKEGHLIICDN------------------ 51 (287)
Q Consensus 3 ~~G~l~~~~~-~------g~i~~~~--~~~~~~~~~~~~----~~~~~i~~d~dg~l~v~~~------------------ 51 (287)
++| ||++.. + |+|..+| +.+......... .++ ++.+.+++++++++.
T Consensus 147 pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Y-d~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~ 224 (462)
T 2ece_A 147 PDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAY-DFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKD 224 (462)
T ss_dssp SSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCC-CEEEETTTTEEEECBCCCHHHHTTCCCTTTHHH
T ss_pred CCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccc-eEEECCCCCEEEEccCcCccccccccchhhhhh
Confidence 567 888662 2 6899999 344433222221 233 566788888666652
Q ss_pred --CCceEEEc-cCC--cEEEeeecCCccccccceEEE--cCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCC
Q 023085 52 --ANGLHKVS-EDG--VENFLSYVNGSKLRFANDVVE--ASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS 123 (287)
Q Consensus 52 --~~gi~~~~-~~g--~~~~~~~~~~~~~~~~~~l~~--d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 123 (287)
.+.|..++ .++ ...+. . +.....|..|.+ +++|. +|++..- .....++.|+.+..+.
T Consensus 225 ~~~d~V~v~D~~~~k~~~tI~-v--g~~g~~P~~i~f~~~Pdg~~aYV~~e~------------~~~~Lss~V~v~~~d~ 289 (462)
T 2ece_A 225 RYGNRIHFWDLRKRKRIHSLT-L--GEENRMALELRPLHDPTKLMGFINMVV------------SLKDLSSSIWLWFYED 289 (462)
T ss_dssp HSCCEEEEEETTTTEEEEEEE-S--CTTEEEEEEEEECSSTTCCEEEEEEEE------------ETTTCCEEEEEEEEET
T ss_pred ccCCEEEEEECCCCcEeeEEe-c--CCCCCccceeEeeECCCCCEEEEEEee------------eccCCCceEEEEEecC
Confidence 35688888 555 33332 1 111224556655 88874 6775420 0000233444332222
Q ss_pred CeeEEee-----c-----c-----------ccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEecc-----
Q 023085 124 NITTLVA-----D-----G-----------FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN----- 177 (287)
Q Consensus 124 ~~~~~~~-----~-----~-----------~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~----- 177 (287)
+++.... . . ...|.+|.+++|++.||+++...+.|.+|++.+....+.......
T Consensus 290 g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~ 369 (462)
T 2ece_A 290 GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFH 369 (462)
T ss_dssp TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTT
T ss_pred CceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeec
Confidence 4322211 0 0 135788999999999999999999999999863321221111111
Q ss_pred ---------CCCCCcceeeCCCCC-EEEEE
Q 023085 178 ---------LPGAPDNINLAPDGT-FWIAI 197 (287)
Q Consensus 178 ---------~~~~~~~i~~d~~G~-lwv~~ 197 (287)
..+.|.++++++||+ ||+++
T Consensus 370 ~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 370 RADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred cccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 113599999999995 77766
No 159
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.57 E-value=5e-06 Score=71.63 Aligned_cols=87 Identities=5% Similarity=-0.121 Sum_probs=58.1
Q ss_pred CcEEEEecC-C----eEEEEE--CCceEEEEeeCCccccCeEECCCC-cEEEEeC----------CCceEEEc-cCC--c
Q 023085 5 GVIYTATRD-G----WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEG-HLIICDN----------ANGLHKVS-EDG--V 63 (287)
Q Consensus 5 G~l~~~~~~-g----~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg-~l~v~~~----------~~gi~~~~-~~g--~ 63 (287)
..+|+.+.. + .|..+| +++..........| ++++++|| ++|+++. .+.|..+| .++ .
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv 109 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI 109 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence 578888743 3 788888 55555444455556 79999999 6999973 23489999 666 4
Q ss_pred EEEeeecCCc---cccccceEEEcCCC-cEEEEcC
Q 023085 64 ENFLSYVNGS---KLRFANDVVEASDG-SLYFTVS 94 (287)
Q Consensus 64 ~~~~~~~~~~---~~~~~~~l~~d~~g-~l~v~~~ 94 (287)
..+. ...+. ....|..++++++| .+|+++.
T Consensus 110 ~~I~-v~~~~~~~~g~~P~~ia~SpDGk~lyVan~ 143 (368)
T 1mda_H 110 ADIE-LPDAPRFSVGPRVHIIGNCASSACLLFFLF 143 (368)
T ss_dssp EEEE-ETTSCSCCBSCCTTSEEECTTSSCEEEEEC
T ss_pred EEEE-CCCccccccCCCcceEEEcCCCCEEEEEcc
Confidence 4432 11000 12468899999998 6899864
No 160
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.56 E-value=6.5e-05 Score=70.99 Aligned_cols=222 Identities=9% Similarity=0.026 Sum_probs=126.0
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEE-EeCCCceEEEc-cCC--cEEEeeecCCcc
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLII-CDNANGLHKVS-EDG--VENFLSYVNGSK 74 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v-~~~~~gi~~~~-~~g--~~~~~~~~~~~~ 74 (287)
.++|. |.+++.+|.|..|+ +++..........+...+++.++|++.+ +...+.|..++ .++ ...+...
T Consensus 22 sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~----- 96 (814)
T 3mkq_A 22 HPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH----- 96 (814)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECC-----
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecC-----
Confidence 46674 66677888999999 4544333332233333889999997544 44444577777 666 3333211
Q ss_pred ccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCC-eeE-EeeccccccceEEEcc-CCCEEEEE
Q 023085 75 LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-ITT-LVADGFYFANGVALSR-DEDYVVVC 151 (287)
Q Consensus 75 ~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~-~~~~~~~~~~~i~~~~-~~~~l~v~ 151 (287)
...+..+++.++|...++. ...+.|..++.+++ ... .+.........++++| +++.++.+
T Consensus 97 ~~~v~~~~~s~~~~~l~~~-----------------~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 159 (814)
T 3mkq_A 97 PDYIRSIAVHPTKPYVLSG-----------------SDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (814)
T ss_dssp SSCEEEEEECSSSSEEEEE-----------------ETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEEeCCCCEEEEE-----------------cCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEE
Confidence 2357889999999766541 23467777776544 332 2233334567788999 66655554
Q ss_pred eCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCC--CCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccc
Q 023085 152 ESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAP--DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFI 229 (287)
Q Consensus 152 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~--~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
...+.|..|++..... ...+..........+++.+ +|.+.++...
T Consensus 160 -~~dg~v~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~------------------------------ 206 (814)
T 3mkq_A 160 -CLDRTVKVWSLGQSTP--NFTLTTGQERGVNYVDYYPLPDKPYMITASD------------------------------ 206 (814)
T ss_dssp -ETTSEEEEEETTCSSC--SEEEECCCTTCCCEEEECCSTTCCEEEEECT------------------------------
T ss_pred -eCCCeEEEEECCCCcc--eeEEecCCCCCEEEEEEEECCCCCEEEEEeC------------------------------
Confidence 4567899999754321 1122212223456677776 7766655544
Q ss_pred cCCCceEEEEECCC-CcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 230 TLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 230 ~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|..++.. ++.+..+....+ .+..+... ++.+.+.....+.|.++++
T Consensus 207 ----dg~i~~~d~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~dg~v~vwd~ 257 (814)
T 3mkq_A 207 ----DLTIKIWDYQTKSCVATLEGHMS----NVSFAVFHPTLPIIISGSEDGTLKIWNS 257 (814)
T ss_dssp ----TSEEEEEETTTTEEEEEEECCSS----CEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred ----CCEEEEEECCCCcEEEEEcCCCC----CEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 2466666643 555555553322 35555554 3443343334455666554
No 161
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.56 E-value=1.2e-05 Score=69.70 Aligned_cols=140 Identities=10% Similarity=-0.023 Sum_probs=84.1
Q ss_pred CCC-cEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEE-eCCCceEEEc-cCC-cEEEeeecCCcccc
Q 023085 3 KNG-VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG-VENFLSYVNGSKLR 76 (287)
Q Consensus 3 ~~G-~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~-~~g-~~~~~~~~~~~~~~ 76 (287)
++| .|+.++.++.|..|+ +++........ ......++.++++++++ ...+.|..++ .++ ...... ....
T Consensus 66 ~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~h~~ 140 (420)
T 3vl1_A 66 KVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ----AHVS 140 (420)
T ss_dssp EEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT----SSSS
T ss_pred ecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc----cccC
Confidence 344 577777888888888 22111111111 11213356788865544 4444577777 555 333211 1234
Q ss_pred ccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCee-EEeeccccccceEEEccCCCEEEEEeCCC
Q 023085 77 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT-TLVADGFYFANGVALSRDEDYVVVCESWK 155 (287)
Q Consensus 77 ~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~l~v~~~~~ 155 (287)
.+.++++.+++.++++ +..++.|..+|..+++. ..+.........++++|+++.|+.+. ..
T Consensus 141 ~v~~~~~~~~~~~l~s-----------------~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d 202 (420)
T 3vl1_A 141 EITKLKFFPSGEALIS-----------------SSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSAS-LD 202 (420)
T ss_dssp CEEEEEECTTSSEEEE-----------------EETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEE-TT
T ss_pred ccEEEEECCCCCEEEE-----------------EeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEc-CC
Confidence 6788999999987664 22356788888776653 33333445567889999998666555 45
Q ss_pred CEEEEEEecC
Q 023085 156 FRCRKYWLKG 165 (287)
Q Consensus 156 ~~l~~~~~~~ 165 (287)
+.|..||+..
T Consensus 203 ~~v~iwd~~~ 212 (420)
T 3vl1_A 203 GTIRLWECGT 212 (420)
T ss_dssp SCEEEEETTT
T ss_pred CcEEEeECCC
Confidence 6788898754
No 162
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.55 E-value=0.00024 Score=59.68 Aligned_cols=167 Identities=12% Similarity=0.077 Sum_probs=100.9
Q ss_pred cEEEEecCCeEEEEE--CCceEEEEee---CCccccCeEECCCCcEEEEeCC-CceEEEc-cCC--cEEEeeecCCcccc
Q 023085 6 VIYTATRDGWIKRLQ--DGTWVNWKFI---DSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VENFLSYVNGSKLR 76 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~~~~~~~---~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~-~~g--~~~~~~~~~~~~~~ 76 (287)
.|..|+.++.|..|+ +++....... ..... .+.+.+++.+.++... +.|..++ .++ ...+... ..
T Consensus 50 ~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~-~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~-----~~ 123 (321)
T 3ow8_A 50 TVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVV-SVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAG-----PV 123 (321)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC-----TT
T ss_pred EEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEE-EEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCC-----Cc
Confidence 455666888888887 4443322111 12223 6788888876665433 4566777 666 3333211 13
Q ss_pred ccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-eeccccccceEEEccCCCEEEEEeCCC
Q 023085 77 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFYFANGVALSRDEDYVVVCESWK 155 (287)
Q Consensus 77 ~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~l~v~~~~~ 155 (287)
.+..+++.++|...++. ...+.+..++..+++... +.........++++|+++.|..+. ..
T Consensus 124 ~~~~~~~spdg~~l~~g-----------------~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~-~d 185 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATG-----------------THVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGA-ID 185 (321)
T ss_dssp CCCCEEECTTSSEEEEE-----------------CTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEE-TT
T ss_pred cEEEEEECCCCCEEEEE-----------------cCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEc-CC
Confidence 46678999999877752 335678888876655432 233334567789999999766665 45
Q ss_pred CEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 156 FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
+.|..||+...+ ....+. .-......+++.++|++.++...
T Consensus 186 g~i~iwd~~~~~--~~~~~~-~h~~~v~~l~~spd~~~l~s~s~ 226 (321)
T 3ow8_A 186 GIINIFDIATGK--LLHTLE-GHAMPIRSLTFSPDSQLLVTASD 226 (321)
T ss_dssp SCEEEEETTTTE--EEEEEC-CCSSCCCEEEECTTSCEEEEECT
T ss_pred CeEEEEECCCCc--EEEEEc-ccCCceeEEEEcCCCCEEEEEcC
Confidence 779999975431 112221 12234677899999986666544
No 163
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.53 E-value=1.1e-05 Score=71.61 Aligned_cols=151 Identities=17% Similarity=0.277 Sum_probs=86.2
Q ss_pred CCCCC--cEEEEecCCeEEEEE-CCce--EEEEee------------CCccccCeEECCC----CcEEEEeCC-------
Q 023085 1 MDKNG--VIYTATRDGWIKRLQ-DGTW--VNWKFI------------DSQTLVGLTSTKE----GHLIICDNA------- 52 (287)
Q Consensus 1 ~d~~G--~l~~~~~~g~i~~~~-~~~~--~~~~~~------------~~~~~~~i~~d~d----g~l~v~~~~------- 52 (287)
+.++| +||++...|+|+.++ ++.. ..+... ..... +|+++|+ +.||++-..
T Consensus 21 ~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gll-gia~~P~f~~n~~lYv~yt~~~~~~~~ 99 (463)
T 2wg3_C 21 HSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLL-SLAFHPNYKKNGKLYVSYTTNQERWAI 99 (463)
T ss_dssp CCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEE-EEEECTTHHHHCEEEEEEEECCCSSCS
T ss_pred ECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcce-eeEeCCCCcCCCEEEEEEeCCCCCccc
Confidence 35677 499999999999998 4432 111111 11234 7899985 889988321
Q ss_pred ------CceEEEc-cC--------C-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcce-eeeeeccCCCce
Q 023085 53 ------NGLHKVS-ED--------G-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEY-CLDILEGKPHGQ 115 (287)
Q Consensus 53 ------~gi~~~~-~~--------g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~-~~~~~~~~~~~~ 115 (287)
..|.++. .. . .+.+.........+....|++++||.|||+....-...... ... ......+.
T Consensus 100 ~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q-~~~~~~Gk 178 (463)
T 2wg3_C 100 GPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMD-GLSDFTGS 178 (463)
T ss_dssp SSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCT-TCCSCTTE
T ss_pred CCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCcccccc-CcCCCCee
Confidence 2466665 21 1 12333221112234566799999999999843310000000 000 01223578
Q ss_pred EEEEeCCCC--------------------eeEEeeccccccceEEEccC-----CC-EEEEEeC
Q 023085 116 LLKYDPSSN--------------------ITTLVADGFYFANGVALSRD-----ED-YVVVCES 153 (287)
Q Consensus 116 v~~~~~~~~--------------------~~~~~~~~~~~~~~i~~~~~-----~~-~l~v~~~ 153 (287)
|+|++++.. ..+.++..+..|.+++|+|+ |+ .+|.++.
T Consensus 179 IlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 179 VLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp EEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC
T ss_pred EEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEeccc
Confidence 999999842 12345566778999999997 33 4666764
No 164
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.53 E-value=1.4e-05 Score=74.94 Aligned_cols=191 Identities=10% Similarity=0.043 Sum_probs=102.4
Q ss_pred CCCCc-EEEEecCCeEEEEE--CC---ceEEEEeeCCccccCeEECCCCcEEEEeCCCceEEEc-cCC-cEEEeeecCCc
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DG---TWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFLSYVNGS 73 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~---~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g-~~~~~~~~~~~ 73 (287)
.+||. |.+++. +.|+.++ ++ ....+........ .+++.|||+..+......|+.++ .++ ...+.......
T Consensus 117 SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~-~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~~~ 194 (741)
T 2ecf_A 117 SPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFAT-DAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGSTT 194 (741)
T ss_dssp CTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEE-EEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCCSS
T ss_pred CCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccc-cccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCccc
Confidence 46775 555554 8899998 44 4444333333344 78899999744433345799998 566 44443211100
Q ss_pred ------------cccccceEEEcCCCc-EEEEcCCCCCCCccee-------------eeee-ccC--CCceEEEEeCCC-
Q 023085 74 ------------KLRFANDVVEASDGS-LYFTVSSSKYLPHEYC-------------LDIL-EGK--PHGQLLKYDPSS- 123 (287)
Q Consensus 74 ------------~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~-------------~~~~-~~~--~~~~v~~~~~~~- 123 (287)
....+..+++++||+ |+++..... ....+. .... .+. ....|+.+|..+
T Consensus 195 ~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 195 IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDES-PVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECT-TSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred eeccccceeeeeccccccceEECCCCCEEEEEEEcCC-CCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 011246789999986 544321100 000000 0000 000 112688888887
Q ss_pred CeeEEeec---cccccceEEEccCCCEEEEEeC----CCCEEEEEEecCCCCcceeEEeccCCC---CCcceeeCCCCCE
Q 023085 124 NITTLVAD---GFYFANGVALSRDEDYVVVCES----WKFRCRKYWLKGERKGKLETFAENLPG---APDNINLAPDGTF 193 (287)
Q Consensus 124 ~~~~~~~~---~~~~~~~i~~~~~~~~l~v~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~d~~G~l 193 (287)
++...+.. .......++| |||+.|++... ....|+.+|.++.+.. ..+.....+ ....+++.+||++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~~~~~~spdg~~ 350 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQR--VLAHETSPTWVPLHNSLRFLDDGSI 350 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEE--EEEEEECSSCCCCCSCCEECTTSCE
T ss_pred CceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceE--EEEEcCCCCcCCcCCceEECCCCeE
Confidence 76554432 2234567889 99998887753 2346888887643211 111111111 2357888999986
Q ss_pred EEEEe
Q 023085 194 WIAII 198 (287)
Q Consensus 194 wv~~~ 198 (287)
.+++.
T Consensus 351 ~~~~~ 355 (741)
T 2ecf_A 351 LWSSE 355 (741)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 55544
No 165
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.51 E-value=0.00041 Score=59.99 Aligned_cols=217 Identities=10% Similarity=-0.024 Sum_probs=125.6
Q ss_pred CcEEEEecCCeEEEEE--CCceEEEEee-CCccccCeEECCCCcEEE-EeCCCceEEEc-cCC--cEEEeeecCCccccc
Q 023085 5 GVIYTATRDGWIKRLQ--DGTWVNWKFI-DSQTLVGLTSTKEGHLII-CDNANGLHKVS-EDG--VENFLSYVNGSKLRF 77 (287)
Q Consensus 5 G~l~~~~~~g~i~~~~--~~~~~~~~~~-~~~~~~~i~~d~dg~l~v-~~~~~gi~~~~-~~g--~~~~~~~~~~~~~~~ 77 (287)
+.+..++.++.|..|+ +++....... ...++..+++.++|++.+ +...+.|..++ .++ ...+.. ....
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~ 178 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAG-----HQAR 178 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-----CSSC
T ss_pred CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecC-----CCCc
Confidence 4677777889999999 5665544443 233333889999997544 44444577777 555 333321 1234
Q ss_pred cceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCC-Ce-eEEeeccccccceEEEccCCCEEEEEeCCC
Q 023085 78 ANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NI-TTLVADGFYFANGVALSRDEDYVVVCESWK 155 (287)
Q Consensus 78 ~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~ 155 (287)
+.++..+ +.++++ +...+.|..+|... +. +..+.........++++|+++.++.+. ..
T Consensus 179 v~~~~~~--~~~l~~-----------------~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d 238 (401)
T 4aez_A 179 VGCLSWN--RHVLSS-----------------GSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGG-ND 238 (401)
T ss_dssp EEEEEEE--TTEEEE-----------------EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE-TT
T ss_pred eEEEEEC--CCEEEE-----------------EcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEe-CC
Confidence 5667663 455553 22356788888762 22 333334445567889999998666665 45
Q ss_pred CEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCC-CEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCc
Q 023085 156 FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGG 234 (287)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
+.|..||+.... ....+. ........+++.+++ ++.++... ...
T Consensus 239 ~~v~iwd~~~~~--~~~~~~-~~~~~v~~~~~~p~~~~ll~~~~g--------------------------------s~d 283 (401)
T 4aez_A 239 NVVQIWDARSSI--PKFTKT-NHNAAVKAVAWCPWQSNLLATGGG--------------------------------TMD 283 (401)
T ss_dssp SCEEEEETTCSS--EEEEEC-CCSSCCCEEEECTTSTTEEEEECC--------------------------------TTT
T ss_pred CeEEEccCCCCC--ccEEec-CCcceEEEEEECCCCCCEEEEecC--------------------------------CCC
Confidence 789999975421 111221 223346788999876 45554431 113
Q ss_pred eEEEEECCC-CcEEEEEECCCCccccceEEEEEe-CCEEEEE--ecCCCeEEEEeC
Q 023085 235 AHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVI--SLTSNFIGKVQL 286 (287)
Q Consensus 235 ~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~--~~~~~~i~~~~~ 286 (287)
+.|..++.+ ++.+..+... ..+..+... +++..+. +...+.|.++++
T Consensus 284 ~~i~i~d~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~ 334 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVDAG-----SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSY 334 (401)
T ss_dssp CEEEEEETTTCCEEEEEECS-----SCEEEEEECSSSSEEEEEECTTTCEEEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCC-----CcEEEEEECCCCCeEEEEeecCCCcEEEEec
Confidence 467777753 6666666532 135666654 4444444 334566766654
No 166
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.51 E-value=1.5e-05 Score=74.67 Aligned_cols=131 Identities=11% Similarity=0.014 Sum_probs=79.2
Q ss_pred CCCCc-EEEEec-CC-----eEEEEE--CCceEEEEeeCC-c-----------------------cccCeEECCCCcEEE
Q 023085 2 DKNGV-IYTATR-DG-----WIKRLQ--DGTWVNWKFIDS-Q-----------------------TLVGLTSTKEGHLII 48 (287)
Q Consensus 2 d~~G~-l~~~~~-~g-----~i~~~~--~~~~~~~~~~~~-~-----------------------~~~~i~~d~dg~l~v 48 (287)
.+||. |++++. ++ .|+.++ +++......... . ....+++++||+..+
T Consensus 45 SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~ 124 (741)
T 2ecf_A 45 APDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLL 124 (741)
T ss_dssp CTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEE
T ss_pred ecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEE
Confidence 46784 777775 66 788888 565554443211 1 123789999997444
Q ss_pred EeCCCceEEEc-cCCc--EEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe
Q 023085 49 CDNANGLHKVS-EDGV--ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI 125 (287)
Q Consensus 49 ~~~~~gi~~~~-~~g~--~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 125 (287)
......|+.++ .++. ... .... ....+..+++.++|+..+.. ..+.|+.++..+++
T Consensus 125 ~~~~~~i~~~d~~~~~~~~~~-~l~~--~~~~~~~~~~SPDG~~la~~------------------~~~~i~~~d~~~g~ 183 (741)
T 2ecf_A 125 FPLGGELYLYDLKQEGKAAVR-QLTH--GEGFATDAKLSPKGGFVSFI------------------RGRNLWVIDLASGR 183 (741)
T ss_dssp EEETTEEEEEESSSCSTTSCC-BCCC--SSSCEEEEEECTTSSEEEEE------------------ETTEEEEEETTTTE
T ss_pred EEeCCcEEEEECCCCCcceEE-Eccc--CCcccccccCCCCCCEEEEE------------------eCCcEEEEecCCCC
Confidence 33345688888 4331 111 1111 11346778999999844421 12479999988777
Q ss_pred eEEeeccccc-----------------cceEEEccCCCEEEEEeC
Q 023085 126 TTLVADGFYF-----------------ANGVALSRDEDYVVVCES 153 (287)
Q Consensus 126 ~~~~~~~~~~-----------------~~~i~~~~~~~~l~v~~~ 153 (287)
...+...... +..++|+|||+.|+++..
T Consensus 184 ~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 184 QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred EEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 6655332211 467899999998887754
No 167
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.49 E-value=9.7e-05 Score=64.73 Aligned_cols=173 Identities=13% Similarity=0.089 Sum_probs=99.7
Q ss_pred cEEEEecCCeEEEEE-CC-----------ce-EEEEeeCCccccCeEECCCCc-EEEEeCC-CceEEEc-cCC---cEEE
Q 023085 6 VIYTATRDGWIKRLQ-DG-----------TW-VNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG---VENF 66 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~-~~-----------~~-~~~~~~~~~~~~~i~~d~dg~-l~v~~~~-~gi~~~~-~~g---~~~~ 66 (287)
.|..++.+|.|..|+ .. .. ..+........ ++++.+++. ++++... +.|..++ ..+ ...+
T Consensus 143 ~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 221 (430)
T 2xyi_A 143 VIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGY-GLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVI 221 (430)
T ss_dssp EEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCC-CEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEE
T ss_pred EEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeE-EEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCcee
Confidence 355566788899998 31 11 12222233345 899999886 5555433 4577777 442 1111
Q ss_pred ee-ecCCccccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe----eEEeeccccccceEE
Q 023085 67 LS-YVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI----TTLVADGFYFANGVA 140 (287)
Q Consensus 67 ~~-~~~~~~~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~~~~~~~~~~~i~ 140 (287)
.. .........+.++++.+ ++.++++. ...+.|..+|..++. +..+......++.++
T Consensus 222 ~~~~~~~~h~~~v~~v~~~p~~~~~l~s~-----------------~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 284 (430)
T 2xyi_A 222 DAKNIFTGHTAVVEDVAWHLLHESLFGSV-----------------ADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLS 284 (430)
T ss_dssp ECSEEECCCSSCEEEEEECSSCTTEEEEE-----------------ETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEE
T ss_pred ccceeecCCCCCEeeeEEeCCCCCEEEEE-----------------eCCCeEEEEECCCCCCCcceeEeecCCCCeEEEE
Confidence 11 00011224578899988 56777652 235678888876542 222333345567899
Q ss_pred EccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCC-EEEEEe
Q 023085 141 LSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAII 198 (287)
Q Consensus 141 ~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-lwv~~~ 198 (287)
++|+++.++++....+.|..|++.... .....+. ...+....+++.+++. +++++.
T Consensus 285 ~~p~~~~~l~tg~~dg~v~vwd~~~~~-~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~ 341 (430)
T 2xyi_A 285 FNPYSEFILATGSADKTVALWDLRNLK-LKLHSFE-SHKDEIFQVQWSPHNETILASSG 341 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTT-SCSEEEE-CCSSCEEEEEECSSCTTEEEEEE
T ss_pred eCCCCCCEEEEEeCCCeEEEEeCCCCC-CCeEEee-cCCCCEEEEEECCCCCCEEEEEe
Confidence 999998777766677889999976421 1122222 1223456788888884 555544
No 168
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.49 E-value=0.00019 Score=61.49 Aligned_cols=225 Identities=10% Similarity=-0.009 Sum_probs=130.9
Q ss_pred cEEEEecCCeEEEEE--CCc------eEEEEeeC-----CccccCeEEC----CCCcE-EEE-eCCCceEEEc-cC----
Q 023085 6 VIYTATRDGWIKRLQ--DGT------WVNWKFID-----SQTLVGLTST----KEGHL-IIC-DNANGLHKVS-ED---- 61 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~------~~~~~~~~-----~~~~~~i~~d----~dg~l-~v~-~~~~gi~~~~-~~---- 61 (287)
.|..++.+|.|..|+ +++ ...+.... .... .+++. +++++ +++ ...+.|..++ ..
T Consensus 83 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 83 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFW-ALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEE-EEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEE-EEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 455666888898888 444 33333221 3334 78888 88875 444 4444577777 55
Q ss_pred --C--cE-----EEeee--cCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee
Q 023085 62 --G--VE-----NFLSY--VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA 130 (287)
Q Consensus 62 --g--~~-----~~~~~--~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 130 (287)
+ .. .+... ........+.++++.+++ ++++ +...+.|..+|..+++.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~-----------------~~~dg~i~i~d~~~~~~~~~~ 223 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIAT-----------------GFNNGTVQISELSTLRPLYNF 223 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEE-----------------ECTTSEEEEEETTTTEEEEEE
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEE-----------------EeCCCcEEEEECCCCceeEEE
Confidence 4 33 33210 001123467889999999 5554 234577888988766644333
Q ss_pred cc-------ccccceEEEccCCCEEEEEeCCC---CEEEEEEecCCCCcceeEEecc------------CCCCCcceeeC
Q 023085 131 DG-------FYFANGVALSRDEDYVVVCESWK---FRCRKYWLKGERKGKLETFAEN------------LPGAPDNINLA 188 (287)
Q Consensus 131 ~~-------~~~~~~i~~~~~~~~l~v~~~~~---~~l~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~d 188 (287)
.. ......++++|+++.++++.. . +.|..|++...+ ....+... .......+++.
T Consensus 224 ~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~-d~~~g~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 300 (397)
T 1sq9_A 224 ESQHSMINNSNSIRSVKFSPQGSLLAIAHD-SNSFGCITLYETEFGE--RIGSLSVPTHSSQASLGEFAHSSWVMSLSFN 300 (397)
T ss_dssp ECCC---CCCCCEEEEEECSSTTEEEEEEE-ETTEEEEEEEETTTCC--EEEEECBC--------CCBSBSSCEEEEEEC
T ss_pred eccccccccCCccceEEECCCCCEEEEEec-CCCCceEEEEECCCCc--ccceeccCcccccccccccccCCcEEEEEEC
Confidence 22 445678899999997666653 4 678899875432 11222110 12345678889
Q ss_pred CCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEE------CC-----CCc
Q 023085 189 PDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLV------DP-----TGQ 256 (287)
Q Consensus 189 ~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~------~~-----~~~ 256 (287)
++|++.++... .+.|..++.+ ++.+..+. .. .|.
T Consensus 301 ~~~~~l~~~~~----------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~ 346 (397)
T 1sq9_A 301 DSGETLCSAGW----------------------------------DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVD 346 (397)
T ss_dssp SSSSEEEEEET----------------------------------TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBC
T ss_pred CCCCEEEEEeC----------------------------------CCeEEEEEcCCCceeEEEecccCcccchhhhhccc
Confidence 98876666554 3567777754 66666666 21 000
Q ss_pred c------ccceEEEEEe-CC----------EEEEEecCCCeEEEEeC
Q 023085 257 L------MSFVTSGLQV-DN----------HLYVISLTSNFIGKVQL 286 (287)
Q Consensus 257 ~------~~~~~~~~~~-~g----------~l~i~~~~~~~i~~~~~ 286 (287)
. ...+..+... ++ ++++++-..+.|.++++
T Consensus 347 ~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 347 EHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp TTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred cccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEc
Confidence 0 2346777775 44 56666666778888775
No 169
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.47 E-value=0.00049 Score=59.14 Aligned_cols=138 Identities=9% Similarity=-0.031 Sum_probs=77.3
Q ss_pred CCceEEEEeCCC-Ce-eEEeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEecc------CCCCCc
Q 023085 112 PHGQLLKYDPSS-NI-TTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN------LPGAPD 183 (287)
Q Consensus 112 ~~~~v~~~~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~ 183 (287)
.++.|..+|... ++ +..+.......+.++++|+++.+ ++.+..+.|..||+..+. ....+... ......
T Consensus 226 ~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l-~s~s~D~~i~lwd~~~~~--~~~~~~~~~~~~~~~~~~v~ 302 (380)
T 3iz6_a 226 CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRF-GTGSDDGTCRLFDMRTGH--QLQVYNREPDRNDNELPIVT 302 (380)
T ss_dssp TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEE-EEECSSSCEEEEETTTTE--EEEEECCCCSSSCCSSCSCS
T ss_pred CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeE-EEEcCCCeEEEEECCCCc--EEEEecccccccccccCceE
Confidence 345677777642 22 23333334456789999999854 444556789999975431 11122111 011246
Q ss_pred ceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCCccccceE
Q 023085 184 NINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVT 262 (287)
Q Consensus 184 ~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~ 262 (287)
.+++.++|++.++... .+.|..+|.. ++....+......-...+.
T Consensus 303 ~~~~s~~g~~l~~g~~----------------------------------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~ 348 (380)
T 3iz6_a 303 SVAFSISGRLLFAGYS----------------------------------NGDCYVWDTLLAEMVLNLGTLQNSHEGRIS 348 (380)
T ss_dssp EEEECSSSSEEEEECT----------------------------------TSCEEEEETTTCCEEEEECCSCSSCCCCCC
T ss_pred EEEECCCCCEEEEEEC----------------------------------CCCEEEEECCCCceEEEEecccCCCCCceE
Confidence 7889999987777654 3567777753 5555555321111133567
Q ss_pred EEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 263 SGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 263 ~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
++... ++...+++-....|.+.++
T Consensus 349 ~l~~s~dg~~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 349 CLGLSSDGSALCTGSWDKNLKIWAF 373 (380)
T ss_dssp EEEECSSSSEEEEECTTSCEEEEEC
T ss_pred EEEECCCCCEEEEeeCCCCEEEEec
Confidence 77765 5555555545566766665
No 170
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.47 E-value=0.00015 Score=65.94 Aligned_cols=222 Identities=9% Similarity=0.026 Sum_probs=127.1
Q ss_pred CC-cEEEEecCCeEEEEE--CC------ceEEEE--eeCCccccCeEECCCCcEEEEeCCC-----ceEEEccCC-cEEE
Q 023085 4 NG-VIYTATRDGWIKRLQ--DG------TWVNWK--FIDSQTLVGLTSTKEGHLIICDNAN-----GLHKVSEDG-VENF 66 (287)
Q Consensus 4 ~G-~l~~~~~~g~i~~~~--~~------~~~~~~--~~~~~~~~~i~~d~dg~l~v~~~~~-----gi~~~~~~g-~~~~ 66 (287)
+| .|..++.+|.|..|+ ++ ...... .....+...+++.++|+..++.... .|+.++... ...+
T Consensus 77 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~ 156 (615)
T 1pgu_A 77 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEV 156 (615)
T ss_dssp TCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEEC
T ss_pred CCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceee
Confidence 66 466677888898888 33 222221 1122233388999999765553232 244444222 3332
Q ss_pred eeecCCccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeec-ccc---ccceEEE
Q 023085 67 LSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-GFY---FANGVAL 141 (287)
Q Consensus 67 ~~~~~~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~---~~~~i~~ 141 (287)
. .....+..+++.+++. ++++ +...+.|..+|..+++...... ... ....+++
T Consensus 157 ~-----~~~~~v~~~~~~~~~~~~l~~-----------------~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 214 (615)
T 1pgu_A 157 S-----GHSQRINACHLKQSRPMRSMT-----------------VGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEF 214 (615)
T ss_dssp C-----SCSSCEEEEEECSSSSCEEEE-----------------EETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEE
T ss_pred e-----cCCccEEEEEECCCCCcEEEE-----------------EeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEE
Confidence 1 1224678899999986 5554 2235678888887666544332 233 4667899
Q ss_pred ccC-CCEEEEEeCCCCEEEEEEecCCCCcceeEEec---cCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHH
Q 023085 142 SRD-EDYVVVCESWKFRCRKYWLKGERKGKLETFAE---NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHV 217 (287)
Q Consensus 142 ~~~-~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~ 217 (287)
+|+ ++.++.+. ..+.|..|++...+ ....+.. ........+++. ++++.++...
T Consensus 215 ~~~~~~~l~~~~-~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~------------------ 272 (615)
T 1pgu_A 215 SPDSGEFVITVG-SDRKISCFDGKSGE--FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGA------------------ 272 (615)
T ss_dssp CSTTCCEEEEEE-TTCCEEEEETTTCC--EEEECCBTTBCCCSCEEEEEES-SSSEEEEEET------------------
T ss_pred CCCCCCEEEEEe-CCCeEEEEECCCCC--EeEEecccccccCCceEEEEEc-CCCEEEEEcC------------------
Confidence 999 88666665 45789999975432 1122211 122345678888 8876666654
Q ss_pred HHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCCccccceEEEEE-eCCEEEEEecCCCeEEEEeC
Q 023085 218 LAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQ-VDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|..++.+ ++.+..+..........+..+.. +++.|..++ ..+.|.++++
T Consensus 273 ----------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~i~~~d~ 326 (615)
T 1pgu_A 273 ----------------DATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS-LDGTLNFYEL 326 (615)
T ss_dssp ----------------TSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEE-TTSCEEEEET
T ss_pred ----------------CCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEE-CCCCEEEEEC
Confidence 2467777755 66777776543222233444444 455555554 4566776665
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.46 E-value=1.3e-05 Score=68.75 Aligned_cols=148 Identities=7% Similarity=-0.059 Sum_probs=85.0
Q ss_pred CCCC-cEEEEecCCeEEEEE--CCceEEEEeeCCccc--cCeEECCCCcEEEEe-----------------------CCC
Q 023085 2 DKNG-VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTL--VGLTSTKEGHLIICD-----------------------NAN 53 (287)
Q Consensus 2 d~~G-~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~--~~i~~d~dg~l~v~~-----------------------~~~ 53 (287)
.+|| .|+++..+..|+.++ +++.......+.... .....+++|++.++. ...
T Consensus 89 spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 89 SPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcc
Confidence 4567 577777777899998 555544433322111 023347888876642 113
Q ss_pred ceEEEc-cCC-cEEEeeecCCccccccceEEEcC-CCcEE-EEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe
Q 023085 54 GLHKVS-EDG-VENFLSYVNGSKLRFANDVVEAS-DGSLY-FTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV 129 (287)
Q Consensus 54 gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~-~g~l~-v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 129 (287)
.|++++ .+| .+.+.... ..+..+.+.+ +|..+ ++.... .......|+.++.++++...+
T Consensus 169 ~l~~~d~~~g~~~~l~~~~-----~~~~~~~~sp~dg~~l~~~~~~~------------~~~~~~~l~~~d~~~~~~~~l 231 (388)
T 3pe7_A 169 RLMRVDLKTGESTVILQEN-----QWLGHPIYRPYDDSTVAFCHEGP------------HDLVDARMWLINEDGTNMRKV 231 (388)
T ss_dssp EEEEEETTTCCEEEEEEES-----SCEEEEEEETTEEEEEEEEECSC------------TTTSSCSEEEEETTSCCCEES
T ss_pred eEEEEECCCCceEEeecCC-----ccccccEECCCCCCEEEEEEecC------------CCCCcceEEEEeCCCCceEEe
Confidence 588888 677 66654321 2356778888 88633 321110 001134799999876665555
Q ss_pred eccc--cccceEEEccCCCEE-EEEeCCCC---EEEEEEecCC
Q 023085 130 ADGF--YFANGVALSRDEDYV-VVCESWKF---RCRKYWLKGE 166 (287)
Q Consensus 130 ~~~~--~~~~~i~~~~~~~~l-~v~~~~~~---~l~~~~~~~~ 166 (287)
.... ......+|+|||+.| |++...+. .|+.++++++
T Consensus 232 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (388)
T 3pe7_A 232 KTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETL 274 (388)
T ss_dssp CCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTC
T ss_pred eeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCC
Confidence 4322 123456899999866 44543332 3889987654
No 172
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.46 E-value=6.4e-05 Score=64.52 Aligned_cols=179 Identities=15% Similarity=0.081 Sum_probs=104.3
Q ss_pred CCCCc-EEEEe--cCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCCCceEEEc-cCC-cEEEeeecCCcc
Q 023085 2 DKNGV-IYTAT--RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFLSYVNGSK 74 (287)
Q Consensus 2 d~~G~-l~~~~--~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g-~~~~~~~~~~~~ 74 (287)
.+||. |.+++ .++.|..|+ +++............ ++++.|||++.++....++.+++ .++ ....... ...
T Consensus 142 SpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~-~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~--~~~ 218 (365)
T 4h5i_A 142 SREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVK-DLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTD--FDK 218 (365)
T ss_dssp CTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCC-EEEECTTSSEEEEECSSCEEEEETTTCCEEEEECC--CCT
T ss_pred cCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceE-EEEEccCCceEEeccceeEEEEEeccCcceeeeec--CCC
Confidence 46775 55666 567788888 444433333344445 89999999987776566788888 666 3222111 111
Q ss_pred ccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-----eeccccccceEEEccCCCEEE
Q 023085 75 LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-----VADGFYFANGVALSRDEDYVV 149 (287)
Q Consensus 75 ~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~~~l~ 149 (287)
...+..+++.++|...++... .......++.++........ +.........++|+|+|+.|.
T Consensus 219 ~~~v~~v~fspdg~~l~~~s~-------------d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~la 285 (365)
T 4h5i_A 219 NWSLSKINFIADDTVLIAASL-------------KKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAV 285 (365)
T ss_dssp TEEEEEEEEEETTEEEEEEEE-------------SSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEE
T ss_pred CCCEEEEEEcCCCCEEEEEec-------------CCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceE
Confidence 235678899999987765211 01112245555544333221 222233456788999999666
Q ss_pred EEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 150 VCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 150 v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
.+. ..+.|..||....+ ....+...=.+....+++.+||++.++...
T Consensus 286 sgs-~D~~V~iwd~~~~~--~~~~~~~gH~~~V~~v~fSpdg~~laS~S~ 332 (365)
T 4h5i_A 286 LAS-NDNSIALVKLKDLS--MSKIFKQAHSFAITEVTISPDSTYVASVSA 332 (365)
T ss_dssp EEE-TTSCEEEEETTTTE--EEEEETTSSSSCEEEEEECTTSCEEEEEET
T ss_pred EEc-CCCEEEEEECCCCc--EEEEecCcccCCEEEEEECCCCCEEEEEeC
Confidence 665 45679999875421 112221111224577999999987666544
No 173
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.44 E-value=2.6e-05 Score=71.17 Aligned_cols=138 Identities=14% Similarity=0.067 Sum_probs=85.4
Q ss_pred eEECCCC--cEEEEeCCCceEEEc-cCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCC
Q 023085 38 LTSTKEG--HLIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPH 113 (287)
Q Consensus 38 i~~d~dg--~l~v~~~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~ 113 (287)
.++.+|| .++++....++..++ .+| .+.+.... . ..+++++||+.+++.+. .....
T Consensus 115 ~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~------~-~~~~~spDG~~la~~~~-------------~~~~~ 174 (582)
T 3o4h_A 115 LSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP------G-FGFVSDIRGDLIAGLGF-------------FGGGR 174 (582)
T ss_dssp EEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES------S-CEEEEEEETTEEEEEEE-------------EETTE
T ss_pred eeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC------C-ceEEECCCCCEEEEEEE-------------cCCCC
Confidence 3455555 355555455666777 667 55554321 1 67889999987663111 01112
Q ss_pred ceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCC-CEEEEEEecCCCCcceeEEeccCCCCCccee------
Q 023085 114 GQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK-FRCRKYWLKGERKGKLETFAENLPGAPDNIN------ 186 (287)
Q Consensus 114 ~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~------ 186 (287)
..|+.+|..+++.+.+.........++|+|||+.|+.++..+ ..|+++++++++ .. ........+.+++
T Consensus 175 ~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~---~~-~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS---VE-DLELPSKDFSSYRPTAITW 250 (582)
T ss_dssp EEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC---EE-ECCCSCSHHHHHCCSEEEE
T ss_pred eEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc---EE-EccCCCcChhhhhhccccc
Confidence 569999988888776655444557889999999888555432 278999876532 22 2212222234456
Q ss_pred --eCCCCCEEEEEec
Q 023085 187 --LAPDGTFWIAIIK 199 (287)
Q Consensus 187 --~d~~G~lwv~~~~ 199 (287)
+++||.++++...
T Consensus 251 ~~~spdg~~~~~~~~ 265 (582)
T 3o4h_A 251 LGYLPDGRLAVVARR 265 (582)
T ss_dssp EEECTTSCEEEEEEE
T ss_pred eeEcCCCcEEEEEEc
Confidence 8999988887765
No 174
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.44 E-value=0.00018 Score=60.97 Aligned_cols=178 Identities=13% Similarity=0.120 Sum_probs=98.5
Q ss_pred CCCCc-EEEEecCCeEEEEE-C-CceEEEEee--CCccccCeEECCC--CcEEEE-eCCCceEEEc-cCC-cEEEeeecC
Q 023085 2 DKNGV-IYTATRDGWIKRLQ-D-GTWVNWKFI--DSQTLVGLTSTKE--GHLIIC-DNANGLHKVS-EDG-VENFLSYVN 71 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~-~-~~~~~~~~~--~~~~~~~i~~d~d--g~l~v~-~~~~gi~~~~-~~g-~~~~~~~~~ 71 (287)
.++|. |..++.+|.|..|+ . +........ ...++..+++.++ +++.++ ...+.|..++ .++ ...+.....
T Consensus 20 s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 99 (379)
T 3jrp_A 20 DYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAV 99 (379)
T ss_dssp CSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECC
T ss_pred cCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecC
Confidence 45674 55666888898888 3 333322221 1222327777765 765554 4434577777 566 334332211
Q ss_pred CccccccceEEEcCC--CcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe---eEEeeccccccceEEEcc---
Q 023085 72 GSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI---TTLVADGFYFANGVALSR--- 143 (287)
Q Consensus 72 ~~~~~~~~~l~~d~~--g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~~~i~~~~--- 143 (287)
....+.++++.++ +.++++ +...+.|..+|..++. ...+.........++++|
T Consensus 100 --~~~~v~~~~~~~~~~~~~l~~-----------------~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 100 --HSASVNSVQWAPHEYGPLLLV-----------------ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp --CSSCEEEEEECCGGGCSEEEE-----------------EETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred --CCcceEEEEeCCCCCCCEEEE-----------------ecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 1246788899988 776664 2235677777766542 112223334456778888
Q ss_pred ----------CCCEEEEEeCCCCEEEEEEecCCCCc-ceeEEeccCCCCCcceeeCCC---CCEEEEEec
Q 023085 144 ----------DEDYVVVCESWKFRCRKYWLKGERKG-KLETFAENLPGAPDNINLAPD---GTFWIAIIK 199 (287)
Q Consensus 144 ----------~~~~l~v~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~d~~---G~lwv~~~~ 199 (287)
+++.++.+. ..+.|..|++...... ........-......+++.++ +++.++...
T Consensus 161 ~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGG-ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp ---------CTTCEEEEEE-TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred cccccccCCCCCCEEEEEe-CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC
Confidence 577555554 4678999998643211 111111112234567888888 665555543
No 175
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.44 E-value=0.00019 Score=62.55 Aligned_cols=220 Identities=12% Similarity=0.086 Sum_probs=125.4
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCceEEEEe-eCCccccCeEECCCCcEEEE-eCCCceEEEc-cCC--cEEEeeecCCc
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTWVNWKF-IDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG--VENFLSYVNGS 73 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~~~~~~-~~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~-~~g--~~~~~~~~~~~ 73 (287)
+++|. |..++.++.|..|+ +++...... ...... .+++.++|+..++ ...+.|..++ .++ ...+...
T Consensus 159 ~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~-~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h---- 233 (410)
T 1vyh_C 159 DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS-SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH---- 233 (410)
T ss_dssp CTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEE-EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC----
T ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCC----
Confidence 34564 55566788888888 333222111 122234 7889999976555 4334577777 666 4444221
Q ss_pred cccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccccccceEEEccC--------
Q 023085 74 KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRD-------- 144 (287)
Q Consensus 74 ~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~-------- 144 (287)
...+..+...++|.++++. ..++.|..+|..+++.... .........++++|+
T Consensus 234 -~~~v~~~~~~~~g~~l~s~-----------------s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 295 (410)
T 1vyh_C 234 -REWVRMVRPNQDGTLIASC-----------------SNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISE 295 (410)
T ss_dssp -SSCEEEEEECTTSSEEEEE-----------------ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGG
T ss_pred -CccEEEEEECCCCCEEEEE-----------------cCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhh
Confidence 2356778888899877752 2345677777765554332 222233455667664
Q ss_pred ------------CCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcch
Q 023085 145 ------------EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSK 212 (287)
Q Consensus 145 ------------~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~ 212 (287)
+. +.++.+..+.|..||+.... ....+. .-.+....++++++|++.++...
T Consensus 296 ~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~~~--~~~~~~-~h~~~v~~v~~~~~g~~l~s~s~------------- 358 (410)
T 1vyh_C 296 ATGSETKKSGKPGP-FLLSGSRDKTIKMWDVSTGM--CLMTLV-GHDNWVRGVLFHSGGKFILSCAD------------- 358 (410)
T ss_dssp CCSCC-------CC-EEEEEETTSEEEEEETTTTE--EEEEEE-CCSSCEEEEEECSSSSCEEEEET-------------
T ss_pred hccccccccCCCCC-EEEEEeCCCeEEEEECCCCc--eEEEEE-CCCCcEEEEEEcCCCCEEEEEeC-------------
Confidence 44 44444556789999975421 122222 12234567889999876665544
Q ss_pred hHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 213 LIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|..++.+ ++.+..+.... ..++++... ++.+.+++-....|.++++
T Consensus 359 ---------------------D~~i~vwd~~~~~~~~~~~~h~----~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 359 ---------------------DKTLRVWDYKNKRCMKTLNAHE----HFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp ---------------------TTEEEEECCTTSCCCEEEECCS----SCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred ---------------------CCeEEEEECCCCceEEEEcCCC----CcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 2467777754 55566665433 246777775 4554455555567777664
No 176
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.44 E-value=0.00037 Score=60.25 Aligned_cols=168 Identities=10% Similarity=0.054 Sum_probs=101.3
Q ss_pred CCC-cEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeCCCceEEEc-cCC---cEEEeeecCCcc
Q 023085 3 KNG-VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVS-EDG---VENFLSYVNGSK 74 (287)
Q Consensus 3 ~~G-~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~~gi~~~~-~~g---~~~~~~~~~~~~ 74 (287)
++| .|.+++.+|.|..|+ +++..........+...+.. +++ ++.+...+.|..++ +.. ...+.. .
T Consensus 144 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~ 216 (401)
T 4aez_A 144 HDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQG-----H 216 (401)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEEC-----C
T ss_pred CCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcC-----C
Confidence 456 466777888999998 44433322222222225666 344 44445445577777 433 233221 1
Q ss_pred ccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-eeccccccceEEEccCCCEEEEEeC
Q 023085 75 LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFYFANGVALSRDEDYVVVCES 153 (287)
Q Consensus 75 ~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~l~v~~~ 153 (287)
...+.++++.+++.++++. ..++.|..+|..+++... +.........++++|++..++++..
T Consensus 217 ~~~v~~~~~~~~~~~l~s~-----------------~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~ 279 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASG-----------------GNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGG 279 (401)
T ss_dssp SSCEEEEEECTTSSEEEEE-----------------ETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEEC
T ss_pred CCCeeEEEEcCCCCEEEEE-----------------eCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEec
Confidence 2367889999998877752 235678888887655433 3334455678999998877777754
Q ss_pred --CCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEe
Q 023085 154 --WKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 198 (287)
Q Consensus 154 --~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~ 198 (287)
..+.|..|+....+ ....+. .......+++.++|+..+++.
T Consensus 280 gs~d~~i~i~d~~~~~--~~~~~~--~~~~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 280 GTMDKQIHFWNAATGA--RVNTVD--AGSQVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp CTTTCEEEEEETTTCC--EEEEEE--CSSCEEEEEECSSSSEEEEEE
T ss_pred CCCCCEEEEEECCCCC--EEEEEe--CCCcEEEEEECCCCCeEEEEe
Confidence 56789999975432 122221 223467788899998777654
No 177
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.43 E-value=0.00014 Score=61.28 Aligned_cols=173 Identities=9% Similarity=0.059 Sum_probs=96.9
Q ss_pred CcEEEEecCCeEEEEE--CCc--eEEEEeeCCccccCe------EECCCCcEEEE-eCCCceEEEc-cCC---cEEEeee
Q 023085 5 GVIYTATRDGWIKRLQ--DGT--WVNWKFIDSQTLVGL------TSTKEGHLIIC-DNANGLHKVS-EDG---VENFLSY 69 (287)
Q Consensus 5 G~l~~~~~~g~i~~~~--~~~--~~~~~~~~~~~~~~i------~~d~dg~l~v~-~~~~gi~~~~-~~g---~~~~~~~ 69 (287)
..|..++.+|.|..|+ +++ ...+........ .+ ++.++++++++ ...+.|..++ .++ ...+..
T Consensus 81 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~- 158 (357)
T 3i2n_A 81 RYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIIN-AIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEP- 158 (357)
T ss_dssp CCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEE-EEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECC-
T ss_pred ceEEEecCCCeEEEEeCCCCCccEEEEEecccceE-EEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccc-
Confidence 3577788899999998 333 223322222222 44 45678865554 4334577777 444 333322
Q ss_pred cCCccccccceEE----EcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEcc--
Q 023085 70 VNGSKLRFANDVV----EASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSR-- 143 (287)
Q Consensus 70 ~~~~~~~~~~~l~----~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~-- 143 (287)
..+.....+..++ +.+++.++++ +...+.|..+|..+++.............++++|
T Consensus 159 ~~~~~~~~v~~~~~~~~~~~~~~~l~~-----------------~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~ 221 (357)
T 3i2n_A 159 VQGENKRDCWTVAFGNAYNQEERVVCA-----------------GYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKD 221 (357)
T ss_dssp CTTSCCCCEEEEEEECCCC-CCCEEEE-----------------EETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSS
T ss_pred cCCCCCCceEEEEEEeccCCCCCEEEE-----------------EccCCeEEEEECccCceeeecCCCCceEEEEcCCCC
Confidence 1221123455565 5567776664 2235688899988777654444445567889999
Q ss_pred -CCCEEEEEeCCCCEEEEEEecCCCC-cceeEE-eccCCCCCcceeeCCCCC-EEEEE
Q 023085 144 -DEDYVVVCESWKFRCRKYWLKGERK-GKLETF-AENLPGAPDNINLAPDGT-FWIAI 197 (287)
Q Consensus 144 -~~~~l~v~~~~~~~l~~~~~~~~~~-~~~~~~-~~~~~~~~~~i~~d~~G~-lwv~~ 197 (287)
+++.++++. ..+.|..|++..... ...... ..........+++.++|. +.++.
T Consensus 222 ~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 278 (357)
T 3i2n_A 222 ISMNKLVATS-LEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTA 278 (357)
T ss_dssp SSCCEEEEEE-STTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEEC-CCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEE
Confidence 888776665 467899999764321 111111 001223456688888887 44443
No 178
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.43 E-value=0.00034 Score=60.34 Aligned_cols=56 Identities=20% Similarity=0.067 Sum_probs=39.0
Q ss_pred EEEccCCCEEEEEeCC---------CCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCC-EEEEEe
Q 023085 139 VALSRDEDYVVVCESW---------KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAII 198 (287)
Q Consensus 139 i~~~~~~~~l~v~~~~---------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-lwv~~~ 198 (287)
++++++++.+|++... ++.|+.+|.+..+. ...+ ...+.|.++++++||+ +++++.
T Consensus 272 ~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~i--~~g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQI--SLGHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred EEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEE--EEEE--ECCCCcCeEEECCCCCeEEEEEc
Confidence 7889999999998642 35799999754321 1222 2334699999999998 666655
No 179
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.43 E-value=0.00011 Score=61.51 Aligned_cols=133 Identities=9% Similarity=0.139 Sum_probs=78.2
Q ss_pred CCcEEEEe--cCCeEEEEE-CCce-EEEEeeCCccccCeEECCCCcEEEEeCC--------------CceEEEccCC--c
Q 023085 4 NGVIYTAT--RDGWIKRLQ-DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNA--------------NGLHKVSEDG--V 63 (287)
Q Consensus 4 ~G~l~~~~--~~g~i~~~~-~~~~-~~~~~~~~~~~~~i~~d~dg~l~v~~~~--------------~gi~~~~~~g--~ 63 (287)
++.||+.. .++.|++++ +|.. +.+... .+. .|..+ .+.||.+... ..|++++.+| .
T Consensus 25 g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~--~~~-~i~~~-g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~ 100 (302)
T 3s25_A 25 DGEVFFSNTNDNGRLYAMNIDGSNIHKLSND--TAM-YINAD-KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS 100 (302)
T ss_dssp TTEEEEEEGGGTTEEEEEETTSCSCEEEEEE--EEE-EEEEC-SSEEEEEEECC------CCSSCCSEEEEEEETTSCCC
T ss_pred CCEEEEEeCCCCceEEEEcCCCCCCEEccCC--cee-eEEEc-CCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc
Confidence 46788886 468899999 5543 333322 122 33333 3356666432 3588888555 5
Q ss_pred EEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEcc
Q 023085 64 ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSR 143 (287)
Q Consensus 64 ~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~ 143 (287)
+.+... ....++++ .+.||+++.. ......|++++.+....+.+..... ..+++
T Consensus 101 ~~l~~~-------~~~~~s~~-g~~Iy~~~~~--------------~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~ 154 (302)
T 3s25_A 101 TVLDPD-------PCIYASLI-GNYIYYLHYD--------------TQTATSLYRIRIDGEEKKKIKNHYL----FTCNT 154 (302)
T ss_dssp EEEECS-------CEEEEEEE-TTEEEEEEES--------------SSSCEEEEEEETTSCCCEEEESSCC----CCSEE
T ss_pred eEeecC-------CccEEEEe-CCEEEEEeec--------------CCCCceEEEEECCCCCeEEEeCCCc----eEeeE
Confidence 554321 11133332 3568876410 1234679999987555555543322 34578
Q ss_pred CCCEEEEEeCCCCEEEEEEecCC
Q 023085 144 DEDYVVVCESWKFRCRKYWLKGE 166 (287)
Q Consensus 144 ~~~~l~v~~~~~~~l~~~~~~~~ 166 (287)
+++.||+++.....|++.++++.
T Consensus 155 ~g~~iy~t~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 155 SDRYFYYNNPKNGQLYRYDTASQ 177 (302)
T ss_dssp ETTEEEEECTTTCCEEEEETTTT
T ss_pred ECCEEEEEeCCCceEEEEECCCC
Confidence 89999999887788999997653
No 180
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.41 E-value=0.00068 Score=58.51 Aligned_cols=173 Identities=12% Similarity=0.056 Sum_probs=98.7
Q ss_pred CCCCcEEEEecCCeEEEEE--CCceEEEEeeC------------------CccccCeEECCCCcEEEE-eCCCceEEEc-
Q 023085 2 DKNGVIYTATRDGWIKRLQ--DGTWVNWKFID------------------SQTLVGLTSTKEGHLIIC-DNANGLHKVS- 59 (287)
Q Consensus 2 d~~G~l~~~~~~g~i~~~~--~~~~~~~~~~~------------------~~~~~~i~~d~dg~l~v~-~~~~gi~~~~- 59 (287)
.++|.+.+...++.+..|+ +++........ ...+..+++.++|++.++ ...+.|..++
T Consensus 73 spdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~ 152 (393)
T 1erj_A 73 SNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDI 152 (393)
T ss_dssp CTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 4677655444456677777 45443221110 001226788999976655 4334577777
Q ss_pred cCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccce
Q 023085 60 EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANG 138 (287)
Q Consensus 60 ~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 138 (287)
.++ ....... ....+.++++.+++...++. ..++.|..+|..+++.............
T Consensus 153 ~~~~~~~~~~~----h~~~v~~~~~~p~~~~l~s~-----------------s~d~~v~iwd~~~~~~~~~~~~~~~v~~ 211 (393)
T 1erj_A 153 ENRKIVMILQG----HEQDIYSLDYFPSGDKLVSG-----------------SGDRTVRIWDLRTGQCSLTLSIEDGVTT 211 (393)
T ss_dssp TTTEEEEEECC----CSSCEEEEEECTTSSEEEEE-----------------ETTSEEEEEETTTTEEEEEEECSSCEEE
T ss_pred CCCcEEEEEcc----CCCCEEEEEEcCCCCEEEEe-----------------cCCCcEEEEECCCCeeEEEEEcCCCcEE
Confidence 566 3222111 12357889999999877752 2356788888887765443333334566
Q ss_pred EEEcc-CCCEEEEEeCCCCEEEEEEecCCCCcceeEEec------cCCCCCcceeeCCCCCEEEEEe
Q 023085 139 VALSR-DEDYVVVCESWKFRCRKYWLKGERKGKLETFAE------NLPGAPDNINLAPDGTFWIAII 198 (287)
Q Consensus 139 i~~~~-~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~d~~G~lwv~~~ 198 (287)
++++| +++.+..+ ...+.|..||...... ...+.. .-......+++.++|++.++..
T Consensus 212 ~~~~~~~~~~l~~~-s~d~~v~iwd~~~~~~--~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s 275 (393)
T 1erj_A 212 VAVSPGDGKYIAAG-SLDRAVRVWDSETGFL--VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS 275 (393)
T ss_dssp EEECSTTCCEEEEE-ETTSCEEEEETTTCCE--EEEEC------CCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCCEEEEE-cCCCcEEEEECCCCcE--EEeecccccCCCCCCCCEEEEEECCCCCEEEEEe
Confidence 78888 77755554 4567788898754321 111110 0112345688888887665554
No 181
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.39 E-value=0.00069 Score=57.21 Aligned_cols=138 Identities=18% Similarity=0.044 Sum_probs=84.0
Q ss_pred CeEECC--CCcEEEE-eCCCceEEEc-cCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccC
Q 023085 37 GLTSTK--EGHLIIC-DNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGK 111 (287)
Q Consensus 37 ~i~~d~--dg~l~v~-~~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~ 111 (287)
.+++.+ +++++++ ...+.|..++ +++ ....... .....+..+++.++|.++++ +.
T Consensus 130 ~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~---~~~~~i~~~~~~pdg~~las-----------------g~ 189 (343)
T 3lrv_A 130 YMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA---KSDVEYSSGVLHKDSLLLAL-----------------YS 189 (343)
T ss_dssp EEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC---CSSCCCCEEEECTTSCEEEE-----------------EC
T ss_pred EEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec---CCCCceEEEEECCCCCEEEE-----------------Ec
Confidence 788889 8987664 4445577788 666 4222211 11234788999999998775 23
Q ss_pred CCceEEEEeCCCCeeE--Eeec-cccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCC-cceeEEeccCCCCC---cc
Q 023085 112 PHGQLLKYDPSSNITT--LVAD-GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERK-GKLETFAENLPGAP---DN 184 (287)
Q Consensus 112 ~~~~v~~~~~~~~~~~--~~~~-~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~---~~ 184 (287)
.++.|..+|..+++.. .+.. .......++|+|++..|..+. . +.|..||+...+. .....+. ....+ ..
T Consensus 190 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~-~~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~ 265 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-D-QTVVCFDLRKDVGTLAYPTYT--IPEFKTGTVT 265 (343)
T ss_dssp TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-S-SBEEEEETTSSTTCBSSCCCB--C-----CCEE
T ss_pred CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-C-CeEEEEEcCCCCcceeecccc--cccccccceE
Confidence 4567888888766543 3333 345567889999999777776 3 3899999864321 1111110 00112 24
Q ss_pred eeeCCCCCEEEEEe
Q 023085 185 INLAPDGTFWIAII 198 (287)
Q Consensus 185 i~~d~~G~lwv~~~ 198 (287)
++++++|++.++..
T Consensus 266 ~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 266 YDIDDSGKNMIAYS 279 (343)
T ss_dssp EEECTTSSEEEEEE
T ss_pred EEECCCCCEEEEec
Confidence 89999998666643
No 182
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.39 E-value=0.00047 Score=58.71 Aligned_cols=171 Identities=9% Similarity=0.042 Sum_probs=97.9
Q ss_pred CCCC-cEEEEecCCeEEEEE--CCceEEEEe-eCCccccCeEECCCCcEEEEeCCCc-eEEEc-cCC--------cEEEe
Q 023085 2 DKNG-VIYTATRDGWIKRLQ--DGTWVNWKF-IDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG--------VENFL 67 (287)
Q Consensus 2 d~~G-~l~~~~~~g~i~~~~--~~~~~~~~~-~~~~~~~~i~~d~dg~l~v~~~~~g-i~~~~-~~g--------~~~~~ 67 (287)
.++| .|..++.+|.|..|+ +++...... ...... .+++.|+|.+.++....+ +..++ ... ...+.
T Consensus 73 s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~-~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~ 151 (354)
T 2pbi_B 73 CKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVM-ACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVA 151 (354)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCC-EEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEE-EEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeee
Confidence 3566 466666899999998 444433322 223334 788999998777654443 44443 211 11111
Q ss_pred eecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-eeccccccceEEEcc--C
Q 023085 68 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFYFANGVALSR--D 144 (287)
Q Consensus 68 ~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~i~~~~--~ 144 (287)
.....+..+++.+++...++ +..++.|..+|..+++... +.........+.+.| +
T Consensus 152 -----~h~~~v~~~~~~~~~~~l~t-----------------~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 209 (354)
T 2pbi_B 152 -----MHTNYLSACSFTNSDMQILT-----------------ASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSET 209 (354)
T ss_dssp -----ECSSCEEEEEECSSSSEEEE-----------------EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSS
T ss_pred -----ccCCcEEEEEEeCCCCEEEE-----------------EeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCC
Confidence 11235677888888876664 2345678888887776433 332333345566765 4
Q ss_pred CCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 145 EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 145 ~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
++.++.+. ..+.|..||+...+ ....+. .-......+++.++|++.++...
T Consensus 210 g~~l~sgs-~Dg~v~~wd~~~~~--~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~ 260 (354)
T 2pbi_B 210 GNTFVSGG-CDKKAMVWDMRSGQ--CVQAFE-THESDVNSVRYYPSGDAFASGSD 260 (354)
T ss_dssp CCEEEEEE-TTSCEEEEETTTCC--EEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred CCEEEEEe-CCCeEEEEECCCCc--EEEEec-CCCCCeEEEEEeCCCCEEEEEeC
Confidence 56555554 56789999975432 122221 12234567888898876666544
No 183
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.39 E-value=0.00066 Score=56.82 Aligned_cols=170 Identities=10% Similarity=0.101 Sum_probs=98.2
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCceEE-EEeeCCccccCeEECCCCcEEEEeCC-CceEEEc-cCC-cEEEeeecCCcc
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTWVN-WKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG-VENFLSYVNGSK 74 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~~~-~~~~~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~-~~g-~~~~~~~~~~~~ 74 (287)
.++|. |..++.++.|..|+ +++... +........ .+.+.+++++.++... +.|..++ ... ...+...
T Consensus 74 s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h----- 147 (319)
T 3frx_A 74 TADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVM-SVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGH----- 147 (319)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCC-----
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEE-EEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEecc-----
Confidence 35664 55666889999999 554433 222233334 7889999976665434 4466666 433 4443211
Q ss_pred ccccceEEEcCC------CcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-eeccccccceEEEccCCCE
Q 023085 75 LRFANDVVEASD------GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFYFANGVALSRDEDY 147 (287)
Q Consensus 75 ~~~~~~l~~d~~------g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~ 147 (287)
...+..+.+.+. +.++++ +..++.|..+|..+.+... +.........++++|+++.
T Consensus 148 ~~~v~~~~~~~~~~~~~~~~~l~s-----------------~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~ 210 (319)
T 3frx_A 148 NDWVSQVRVVPNEKADDDSVTIIS-----------------AGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTL 210 (319)
T ss_dssp SSCEEEEEECCC------CCEEEE-----------------EETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSE
T ss_pred CCcEEEEEEccCCCCCCCccEEEE-----------------EeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCE
Confidence 123455555543 334443 2235667788877665433 2233445678899999986
Q ss_pred EEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 148 VVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 148 l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
|..+. ..+.|..||+...+ ....+. .......+++.++|.+.++...
T Consensus 211 l~s~~-~dg~i~iwd~~~~~--~~~~~~--~~~~v~~~~~sp~~~~la~~~~ 257 (319)
T 3frx_A 211 IASAG-KDGEIMLWNLAAKK--AMYTLS--AQDEVFSLAFSPNRYWLAAATA 257 (319)
T ss_dssp EEEEE-TTCEEEEEETTTTE--EEEEEE--CCSCEEEEEECSSSSEEEEEET
T ss_pred EEEEe-CCCeEEEEECCCCc--EEEEec--CCCcEEEEEEcCCCCEEEEEcC
Confidence 55554 56789999975431 111221 2234567889999876665544
No 184
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.39 E-value=0.00011 Score=62.90 Aligned_cols=222 Identities=12% Similarity=0.114 Sum_probs=121.9
Q ss_pred CCCCcEEEEecCCeEEEEE--CCceE---EEEee-CCccccCeEECCCCcEEEE-eCCCceEEEc-cCC--cEEEeeecC
Q 023085 2 DKNGVIYTATRDGWIKRLQ--DGTWV---NWKFI-DSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG--VENFLSYVN 71 (287)
Q Consensus 2 d~~G~l~~~~~~g~i~~~~--~~~~~---~~~~~-~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~-~~g--~~~~~~~~~ 71 (287)
.+++.+.+++.+|.|..|+ +++.. .+... ...++..+++.++|++.++ ...+.|..++ .++ ...+..
T Consensus 103 s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~--- 179 (357)
T 4g56_B 103 VSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA--- 179 (357)
T ss_dssp ETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECC---
T ss_pred cCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC---
Confidence 3567788888888888887 33221 11111 1122337899999976655 4344577777 666 333321
Q ss_pred CccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee---ccccccceEEEccCCCE
Q 023085 72 GSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA---DGFYFANGVALSRDEDY 147 (287)
Q Consensus 72 ~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~ 147 (287)
....++++++.+++. ++++. ..++.|..+|..+++..... .....+..++++|++..
T Consensus 180 --h~~~v~~v~~s~~~~~~~~s~-----------------~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~ 240 (357)
T 4g56_B 180 --HSSEVNCVAACPGKDTIFLSC-----------------GEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDD 240 (357)
T ss_dssp --CSSCEEEEEECTTCSSCEEEE-----------------ETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTT
T ss_pred --CCCCEEEEEEccCCCceeeee-----------------ccCCceEEEECCCCceeeeeeeccccccccchhhhhcccc
Confidence 123577888887763 55531 23466887887665533221 11234567889998665
Q ss_pred EEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccc
Q 023085 148 VVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQ 227 (287)
Q Consensus 148 l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
++++....+.|..||+...+ ....+. ........+++.++|.-++++...
T Consensus 241 ~la~g~~d~~i~~wd~~~~~--~~~~~~-~~~~~v~~l~~sp~~~~~lasgs~--------------------------- 290 (357)
T 4g56_B 241 TFACGDETGNVSLVNIKNPD--SAQTSA-VHSQNITGLAYSYHSSPFLASISE--------------------------- 290 (357)
T ss_dssp EEEEEESSSCEEEEESSCGG--GCEEEC-CCSSCEEEEEECSSSSCCEEEEET---------------------------
T ss_pred eEEEeecccceeEEECCCCc--EeEEEe-ccceeEEEEEEcCCCCCEEEEEeC---------------------------
Confidence 66555556789999975432 122222 122235678888887544433321
Q ss_pred cccCCCceEEEEECCCC-cEEEEEECCCCccccceEEEEEe--CCEEEEEecCCCeEEEEeC
Q 023085 228 FITLGGGAHLIHVAEDG-TIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 228 ~~~~~~~~~v~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|..+|.+. +.+..+.. ...+.++... ++.++++.-.-+.|.+.++
T Consensus 291 ------D~~i~iwd~~~~~~~~~~~H-----~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 291 ------DCTVAVLDADFSEVFRDLSH-----RDFVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp ------TSCEEEECTTSCEEEEECCC-----SSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred ------CCEEEEEECCCCcEeEECCC-----CCCEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 24566777664 33433321 2346777764 4555554444556766665
No 185
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.38 E-value=0.00077 Score=62.79 Aligned_cols=174 Identities=10% Similarity=0.048 Sum_probs=100.9
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCceEE-EEeeCCccccCeEECCCCcEEEE-eCCCceEEEccCC--cEEEeeecCCcc
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTWVN-WKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVSEDG--VENFLSYVNGSK 74 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~~~-~~~~~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~~~g--~~~~~~~~~~~~ 74 (287)
.++|. |..++.++.|..|+ ++.... +........ .+++.++++..++ ...+.|..++..+ ...+.... ...
T Consensus 439 s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~-~~h 516 (694)
T 3dm0_A 439 SSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVL-SVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGG-EGH 516 (694)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSST-TSC
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEE-EEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCC-CCC
Confidence 35664 55666889999999 444332 222233334 8889999975554 4334566666333 33332111 112
Q ss_pred ccccceEEEcCCC--cEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccccccceEEEccCCCEEEEE
Q 023085 75 LRFANDVVEASDG--SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYVVVC 151 (287)
Q Consensus 75 ~~~~~~l~~d~~g--~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~l~v~ 151 (287)
...+.++++.+++ .+.++ +..++.|..+|..+++.... .........++++|+++.|..+
T Consensus 517 ~~~v~~~~~~~~~~~~~l~s-----------------~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg 579 (694)
T 3dm0_A 517 RDWVSCVRFSPNTLQPTIVS-----------------ASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASG 579 (694)
T ss_dssp SSCEEEEEECSCSSSCEEEE-----------------EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCcEEEEEEeCCCCcceEEE-----------------EeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEE
Confidence 2357788888876 34553 22356788888776654433 3334456788999999855554
Q ss_pred eCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 152 ESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 152 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
+..+.|..||+...+ . ............+++.+++.+.++...
T Consensus 580 -~~Dg~i~iwd~~~~~---~-~~~~~~~~~v~~~~~sp~~~~l~~~~~ 622 (694)
T 3dm0_A 580 -GKDGVVLLWDLAEGK---K-LYSLEANSVIHALCFSPNRYWLCAATE 622 (694)
T ss_dssp -ETTSBCEEEETTTTE---E-EECCBCSSCEEEEEECSSSSEEEEEET
T ss_pred -eCCCeEEEEECCCCc---e-EEEecCCCcEEEEEEcCCCcEEEEEcC
Confidence 456788899875421 1 111112234567888888876666554
No 186
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.38 E-value=0.00031 Score=60.16 Aligned_cols=228 Identities=12% Similarity=0.018 Sum_probs=123.5
Q ss_pred CcEEEEecCCeEEEEE--CCc-------eEEEEeeCCccccCeEECCC----C---cEEEE-eCCCceEEEc-cCC-c--
Q 023085 5 GVIYTATRDGWIKRLQ--DGT-------WVNWKFIDSQTLVGLTSTKE----G---HLIIC-DNANGLHKVS-EDG-V-- 63 (287)
Q Consensus 5 G~l~~~~~~g~i~~~~--~~~-------~~~~~~~~~~~~~~i~~d~d----g---~l~v~-~~~~gi~~~~-~~g-~-- 63 (287)
..|..++.+|.|..|+ .++ ...+........ .+++.++ | +++++ ...+.|..++ .++ .
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~ 105 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLH-HVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETK 105 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEE-EEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTC
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEE-EEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccc
Confidence 4567777899999999 444 333332223334 7888888 8 65554 4344577776 444 2
Q ss_pred ---EEEeeecCCc-cccccceEEEc----CCCcE-EEEcCCCCCCCcceeeeeeccCCCceEEEEeCCC------Ce-eE
Q 023085 64 ---ENFLSYVNGS-KLRFANDVVEA----SDGSL-YFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS------NI-TT 127 (287)
Q Consensus 64 ---~~~~~~~~~~-~~~~~~~l~~d----~~g~l-~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~-~~ 127 (287)
.......... ....+.++++. +++.. +++. ...+.|..+|..+ ++ +.
T Consensus 106 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-----------------~~dg~i~iwd~~~~~~~~~~~~~~ 168 (397)
T 1sq9_A 106 KVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVAT-----------------DVKGTTYIWKFHPFADESNSLTLN 168 (397)
T ss_dssp CEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEE-----------------ETTSCEEEEEEESSSSHHHHTTTC
T ss_pred cccceeecccccccCCCcEEEEEEeeccCCCCceEEEEE-----------------eCCCcEEEEeCCccccccccceee
Confidence 2211111000 02467889999 88876 6642 2234565555443 22 21
Q ss_pred -----Eee-------ccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEecc---C---CCCCcceeeCC
Q 023085 128 -----LVA-------DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN---L---PGAPDNINLAP 189 (287)
Q Consensus 128 -----~~~-------~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~---~---~~~~~~i~~d~ 189 (287)
.+. ........++++|++ .+++ ....+.|..|++...+ ....+. . . ...+..+++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~-~~~dg~i~i~d~~~~~--~~~~~~-~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 169 WSPTLELQGTVESPMTPSQFATSVDISERG-LIAT-GFNNGTVQISELSTLR--PLYNFE-SQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEE-ECTTSEEEEEETTTTE--EEEEEE-CCC---CCCCCEEEEEECS
T ss_pred ccCcceeeeeeccccCCCCCceEEEECCCc-eEEE-EeCCCcEEEEECCCCc--eeEEEe-ccccccccCCccceEEECC
Confidence 221 123345778899988 4444 4556789999975421 112222 1 1 33467788999
Q ss_pred CCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEECCCC---------cccc
Q 023085 190 DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTG---------QLMS 259 (287)
Q Consensus 190 ~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~~---------~~~~ 259 (287)
++++.++.... ...+.|..++. .++.+..+..+.. ....
T Consensus 244 ~~~~l~~~~~d-------------------------------~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (397)
T 1sq9_A 244 QGSLLAIAHDS-------------------------------NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS 292 (397)
T ss_dssp STTEEEEEEEE-------------------------------TTEEEEEEEETTTCCEEEEECBC--------CCBSBSS
T ss_pred CCCEEEEEecC-------------------------------CCCceEEEEECCCCcccceeccCcccccccccccccCC
Confidence 99876666540 00147777775 4666666653100 0123
Q ss_pred ceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 260 FVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 260 ~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
.+..+... ++++.++....+.|.++++
T Consensus 293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 320 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAGWDGKLRFWDV 320 (397)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 46666665 4555555556677887776
No 187
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.38 E-value=9.1e-05 Score=68.50 Aligned_cols=216 Identities=10% Similarity=-0.019 Sum_probs=117.5
Q ss_pred CCC-c-EEEEe-cCCeEEEEE-C----CceEEEEee-----CCccccCeEECCCCc-EEEEeCC----------CceEEE
Q 023085 3 KNG-V-IYTAT-RDGWIKRLQ-D----GTWVNWKFI-----DSQTLVGLTSTKEGH-LIICDNA----------NGLHKV 58 (287)
Q Consensus 3 ~~G-~-l~~~~-~~g~i~~~~-~----~~~~~~~~~-----~~~~~~~i~~d~dg~-l~v~~~~----------~gi~~~ 58 (287)
+|| . |.++. ....|+.++ + +....+... ..... .+++++||+ |+++... ..|+++
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~-~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~ 166 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWA-DPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAV 166 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEE-EEEEETTTTEEEEEEEEECSSSTTCEEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCcccc-CcEECCCCCEEEEEEecccCCCCCCceeEEEEE
Confidence 556 4 56655 357788888 6 554444332 11233 778899996 5444322 258888
Q ss_pred c-cC------C-cEEEe-eecCCccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCC-CC---
Q 023085 59 S-ED------G-VENFL-SYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SN--- 124 (287)
Q Consensus 59 ~-~~------g-~~~~~-~~~~~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~--- 124 (287)
+ .+ + .+.+. .. ...+..+++++||. |.++.... ..+.| ....|+.++.+ ++
T Consensus 167 ~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~SpDG~~la~~~~~~--~~~~~--------~~~~i~~~d~~~~g~~~ 231 (662)
T 3azo_A 167 PLDGSAAADRSAVRELSDDA-----HRFVTGPRLSPDGRQAVWLAWDH--PRMPW--------EGTELKTARVTEDGRFA 231 (662)
T ss_dssp ETTSTTTTCGGGSEESSCSC-----SSEECCCEECTTSSEEEEEEECT--TCCTT--------TCEEEEEEEECTTSCEE
T ss_pred ECCCCccccCCceeEEEecC-----CCcccCceECCCCCEEEEEECCC--CCCCC--------CCcEEEEEEECCCCccc
Confidence 8 66 6 55443 11 12456678999996 43332110 00000 12468888877 46
Q ss_pred eeEEeecc-ccccceEEEccCCCEEEEEeCCCC--EEEEEEecCCCCcceeEEeccCCC--------CCcceeeCCCCCE
Q 023085 125 ITTLVADG-FYFANGVALSRDEDYVVVCESWKF--RCRKYWLKGERKGKLETFAENLPG--------APDNINLAPDGTF 193 (287)
Q Consensus 125 ~~~~~~~~-~~~~~~i~~~~~~~~l~v~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~i~~d~~G~l 193 (287)
+...+... ......++|+|||+ ++++....+ .|++++.++++ .......... ....+++.++|++
T Consensus 232 ~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~---~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~ 307 (662)
T 3azo_A 232 DTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGA---ATQLCRREEEFAGPLWTPGMRWFAPLANGLI 307 (662)
T ss_dssp EEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCC---EEESSCCSSBSSCCCCSTTCCSEEECTTSCE
T ss_pred ccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCc---eeecccccccccCccccccCceEeEeCCCEE
Confidence 44444432 34556788999999 555554444 78888864332 1111111000 0245677778887
Q ss_pred EEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEEE-EEeCCEEE
Q 023085 194 WIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSG-LQVDNHLY 272 (287)
Q Consensus 194 wv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~g~l~ 272 (287)
+++.... ...|+.++.++..+..+....+ .+..+ ..+++.++
T Consensus 308 ~~~~~~~---------------------------------~~~l~~~d~~~~~~~~l~~~~~----~~~~~~s~~~~~~~ 350 (662)
T 3azo_A 308 AVVHGKG---------------------------------AAVLGILDPESGELVDAAGPWT----EWAATLTVSGTRAV 350 (662)
T ss_dssp EEEEBSS---------------------------------SCEEEEEETTTTEEEECCSSCC----EEEEEEEEETTEEE
T ss_pred EEEEEcC---------------------------------ccEEEEEECCCCcEEEecCCCC----eEEEEEecCCCEEE
Confidence 7665421 3478888877666666654332 23334 44555555
Q ss_pred EEe
Q 023085 273 VIS 275 (287)
Q Consensus 273 i~~ 275 (287)
+..
T Consensus 351 ~~~ 353 (662)
T 3azo_A 351 GVA 353 (662)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 188
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.36 E-value=0.00023 Score=64.69 Aligned_cols=232 Identities=12% Similarity=0.018 Sum_probs=124.8
Q ss_pred CCCCcEEEEecCCeEEEEE--CC----ceE-EEEeeCCc-cccCeEECC--CCcEEEE-eCCCceEEEc-cCC------c
Q 023085 2 DKNGVIYTATRDGWIKRLQ--DG----TWV-NWKFIDSQ-TLVGLTSTK--EGHLIIC-DNANGLHKVS-EDG------V 63 (287)
Q Consensus 2 d~~G~l~~~~~~g~i~~~~--~~----~~~-~~~~~~~~-~~~~i~~d~--dg~l~v~-~~~~gi~~~~-~~g------~ 63 (287)
+++|.+.+...++.|..|+ ++ +.. .+...... .. .+++.+ ++++.++ ...+.|..++ .++ .
T Consensus 27 spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~-~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~ 105 (615)
T 1pgu_A 27 DPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVT-TVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVE 105 (615)
T ss_dssp ETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEE-EEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEE
T ss_pred CCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEE-EEEECcCCCCCEEEEecCCCEEEEEeCCCCccccccc
Confidence 4677544333477888888 44 333 23222333 44 889999 9976555 4333455555 322 0
Q ss_pred EEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEcc
Q 023085 64 ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSR 143 (287)
Q Consensus 64 ~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~ 143 (287)
........ .....+.++++.++|...++... .....+.|+.++.. ..+..+.........++++|
T Consensus 106 ~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~-------------~~~~~~~v~~~d~~-~~~~~~~~~~~~v~~~~~~~ 170 (615)
T 1pgu_A 106 VNVKSEFQ-VLAGPISDISWDFEGRRLCVVGE-------------GRDNFGVFISWDSG-NSLGEVSGHSQRINACHLKQ 170 (615)
T ss_dssp EEEEEEEE-CCSSCEEEEEECTTSSEEEEEEC-------------CSSCSEEEEETTTC-CEEEECCSCSSCEEEEEECS
T ss_pred ccccchhh-cccccEEEEEEeCCCCEEEEecc-------------CCCCccEEEEEECC-CcceeeecCCccEEEEEECC
Confidence 11111111 11245788999999987664211 00112567777743 34444444445567889999
Q ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCC---CCcceeeCCC-CCEEEEEeccchhHHHHhhcchhHHHHHH
Q 023085 144 DEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPG---APDNINLAPD-GTFWIAIIKLDARRMKILNSSKLIKHVLA 219 (287)
Q Consensus 144 ~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~d~~-G~lwv~~~~~~~~~~~~~~~~~~~~~~~~ 219 (287)
+++.++++....+.|..|+....+ ....+. .... ....+++.++ |++.++...
T Consensus 171 ~~~~~l~~~~~d~~v~vwd~~~~~--~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~-------------------- 227 (615)
T 1pgu_A 171 SRPMRSMTVGDDGSVVFYQGPPFK--FSASDR-THHKQGSFVRDVEFSPDSGEFVITVGS-------------------- 227 (615)
T ss_dssp SSSCEEEEEETTTEEEEEETTTBE--EEEEEC-SSSCTTCCEEEEEECSTTCCEEEEEET--------------------
T ss_pred CCCcEEEEEeCCCcEEEEeCCCcc--eeeeec-ccCCCCceEEEEEECCCCCCEEEEEeC--------------------
Confidence 998555555567889999864321 111221 1122 3567888998 876665543
Q ss_pred hCCccccccccCCCceEEEEECC-CCcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEeC
Q 023085 220 AYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 220 ~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|..++. .++.+..+..+.......+..+...++++.++....+.|.++++
T Consensus 228 --------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~ 281 (615)
T 1pgu_A 228 --------------DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDV 281 (615)
T ss_dssp --------------TCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEET
T ss_pred --------------CCeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEEC
Confidence 246677774 46666666210000112355555534444444444566776665
No 189
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.35 E-value=0.0001 Score=61.84 Aligned_cols=171 Identities=9% Similarity=0.006 Sum_probs=96.3
Q ss_pred CCC-cEEEEecCCeEEEEE--CCc----eEEEEeeCCccccCeEECCCCc--EEEEeCCCceEEEcc-CC--cEEEeeec
Q 023085 3 KNG-VIYTATRDGWIKRLQ--DGT----WVNWKFIDSQTLVGLTSTKEGH--LIICDNANGLHKVSE-DG--VENFLSYV 70 (287)
Q Consensus 3 ~~G-~l~~~~~~g~i~~~~--~~~----~~~~~~~~~~~~~~i~~d~dg~--l~v~~~~~gi~~~~~-~g--~~~~~~~~ 70 (287)
++| .|.+++.++.|..|+ .+. ............ .+++.++++ |+.+...+.|..++. .. ...+..
T Consensus 21 ~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-- 97 (342)
T 1yfq_A 21 PSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL-CCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTN-- 97 (342)
T ss_dssp GGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEE-EEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBS--
T ss_pred CCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceE-EEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccc--
Confidence 455 466777889898888 444 333333333344 788898898 444454455777775 54 322211
Q ss_pred CCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCC---------CeeEEeeccccccceEEE
Q 023085 71 NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS---------NITTLVADGFYFANGVAL 141 (287)
Q Consensus 71 ~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---------~~~~~~~~~~~~~~~i~~ 141 (287)
......+.++++.+ +.++++. ...+.|..+|..+ ++..........+..+++
T Consensus 98 -~~~~~~v~~l~~~~-~~~l~s~-----------------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 158 (342)
T 1yfq_A 98 -NEANLGICRICKYG-DDKLIAA-----------------SWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT 158 (342)
T ss_dssp -CCCCSCEEEEEEET-TTEEEEE-----------------ETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEE
T ss_pred -cCCCCceEEEEeCC-CCEEEEE-----------------cCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEe
Confidence 00224567888888 7766642 2346677777543 221111112234567778
Q ss_pred ccCCCEEEEEeCCCCEEEEEEecC-CCCcceeEEeccCCCCCcceeeCC-CCCEEEEEec
Q 023085 142 SRDEDYVVVCESWKFRCRKYWLKG-ERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIK 199 (287)
Q Consensus 142 ~~~~~~l~v~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~d~-~G~lwv~~~~ 199 (287)
++++ ++++. ..+.|..|++.. .... ...........+..+++.+ ++++.++...
T Consensus 159 ~~~~--l~~~~-~d~~i~i~d~~~~~~~~-~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~ 214 (342)
T 1yfq_A 159 NSSR--LIVGM-NNSQVQWFRLPLCEDDN-GTIEESGLKYQIRDVALLPKEQEGYACSSI 214 (342)
T ss_dssp CSSE--EEEEE-STTEEEEEESSCCTTCC-CEEEECSCSSCEEEEEECSGGGCEEEEEET
T ss_pred cCCc--EEEEe-CCCeEEEEECCcccccc-ceeeecCCCCceeEEEECCCCCCEEEEEec
Confidence 8766 55554 467899999865 3211 1111112233467788888 8876665544
No 190
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.35 E-value=9.2e-05 Score=61.96 Aligned_cols=193 Identities=15% Similarity=0.106 Sum_probs=116.0
Q ss_pred CeEEEEE-CCce-EEEEeeCCccccCeEECCCC-cEEEEe---C-CCceEEEccCC--cEEEeeecCCccccccceEEEc
Q 023085 14 GWIKRLQ-DGTW-VNWKFIDSQTLVGLTSTKEG-HLIICD---N-ANGLHKVSEDG--VENFLSYVNGSKLRFANDVVEA 84 (287)
Q Consensus 14 g~i~~~~-~~~~-~~~~~~~~~~~~~i~~d~dg-~l~v~~---~-~~gi~~~~~~g--~~~~~~~~~~~~~~~~~~l~~d 84 (287)
..|++++ +|.. +.+.... +..+.++| .||.++ . ...|++++.+| .+.+..... .+++
T Consensus 88 ~~Iy~i~~dg~~~~~l~~~~-----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~---------~~~~ 153 (302)
T 3s25_A 88 NSLCRIKRNGHGSTVLDPDP-----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL---------FTCN 153 (302)
T ss_dssp EEEEEEETTSCCCEEEECSC-----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC---------CCSE
T ss_pred CeEEEEeCCCCcceEeecCC-----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc---------eEee
Confidence 4688888 4432 2332221 22344444 688776 2 24688888666 666643311 1123
Q ss_pred CC-CcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCC-CEEEEEE
Q 023085 85 SD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK-FRCRKYW 162 (287)
Q Consensus 85 ~~-g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~-~~l~~~~ 162 (287)
.+ +.||+++. ....|++++.+++..+.+... +....+.|+++.||+++... .+|.+.+
T Consensus 154 ~~g~~iy~t~~-----------------g~~~Iy~~~l~g~~~~~l~~~---~~~~~~~P~g~~iy~t~~~~~~~I~~~~ 213 (302)
T 3s25_A 154 TSDRYFYYNNP-----------------KNGQLYRYDTASQSEALFYDC---NCYKPVVLDDTNVYYMDVNRDNAIVHVN 213 (302)
T ss_dssp EETTEEEEECT-----------------TTCCEEEEETTTTEEEEEECS---CEEEEEEEETTEEEEEEGGGTTEEEEEC
T ss_pred EECCEEEEEeC-----------------CCceEEEEECCCCCEEEEeCC---CccceeeecCCEEEEEEcCCCcEEEEEE
Confidence 33 46887642 245799998876665555332 22234568999999998643 5899998
Q ss_pred ecCCCCcceeEEeccCCCCCcceeeCCCC-CEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEEC
Q 023085 163 LKGERKGKLETFAENLPGAPDNINLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA 241 (287)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 241 (287)
+++.. ...+... .. ..++++| .||.+.... ...|.+++
T Consensus 214 ldG~~---~~~Lt~~--~~---~~~~~~g~~Iy~~~~~~---------------------------------~~~i~~~~ 252 (302)
T 3s25_A 214 INNPN---PVVLTEA--NI---EHYNVYGSLIFYQRGGD---------------------------------NPALCVVK 252 (302)
T ss_dssp SSSCC---CEECSCS--CE---EEEEEETTEEEEEECSS---------------------------------SCEEEEEE
T ss_pred CCCCC---eEEEeCC--Cc---ceEEECCCEEEEEECCC---------------------------------CcEEEEEE
Confidence 87632 2222211 11 2355555 566665431 25889999
Q ss_pred CCCcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEeCC
Q 023085 242 EDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 242 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~~ 287 (287)
.+|...+.+...+ ...+...++.||++......|.++.++
T Consensus 253 ~DG~~r~~l~~~~------~~~i~i~~d~Iy~td~~~~~i~~~~~d 292 (302)
T 3s25_A 253 NDGTGFKELAKGE------FCNINVTSQYVYFTDFVSNKEYCTSTQ 292 (302)
T ss_dssp TTSCCCEEEEESC------EEEEEECSSEEEEEETTTCCEEEEESS
T ss_pred CCCCccEEeeCCc------cceEEEeCCEEEEEECCCCeEEEEECC
Confidence 9987666665321 346777799999999988889988764
No 191
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.34 E-value=0.00046 Score=58.49 Aligned_cols=176 Identities=10% Similarity=0.085 Sum_probs=97.7
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCceEEEE---eeCCccccCeEECCCCcEEEE-eCCCceEEEc-cCC-cEEEeeecCC
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTWVNWK---FIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG-VENFLSYVNG 72 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~~~~~---~~~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~-~~g-~~~~~~~~~~ 72 (287)
.++|. |..++.++.|..|+ .+...... .....++..+++.++|++.++ .....+..++ ..+ .+.+.... +
T Consensus 25 sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~-~ 103 (345)
T 3fm0_A 25 NPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLE-G 103 (345)
T ss_dssp CTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEEC-C
T ss_pred CCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEcc-C
Confidence 45664 55566888888888 44332211 111222337899999976555 3334455555 444 33332211 1
Q ss_pred ccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe-e---EEeeccccccceEEEccCCCEE
Q 023085 73 SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI-T---TLVADGFYFANGVALSRDEDYV 148 (287)
Q Consensus 73 ~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~---~~~~~~~~~~~~i~~~~~~~~l 148 (287)
....+.++++.++|.++++. ..++.|..++..++. . ..+.........++++|+++.|
T Consensus 104 -h~~~v~~v~~sp~~~~l~s~-----------------s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 165 (345)
T 3fm0_A 104 -HENEVKSVAWAPSGNLLATC-----------------SRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELL 165 (345)
T ss_dssp -CSSCEEEEEECTTSSEEEEE-----------------ETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCE
T ss_pred -CCCCceEEEEeCCCCEEEEE-----------------ECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEE
Confidence 12467889999999887752 224556656554332 1 1222233445678899999866
Q ss_pred EEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEe
Q 023085 149 VVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 198 (287)
Q Consensus 149 ~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~ 198 (287)
..+. ..+.|..|+...........+. .-......++++++|++.++..
T Consensus 166 ~s~s-~d~~i~~w~~~~~~~~~~~~~~-~h~~~v~~l~~sp~g~~l~s~s 213 (345)
T 3fm0_A 166 ASAS-YDDTVKLYREEEDDWVCCATLE-GHESTVWSLAFDPSGQRLASCS 213 (345)
T ss_dssp EEEE-TTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEe-CCCcEEEEEecCCCEEEEEEec-CCCCceEEEEECCCCCEEEEEe
Confidence 6555 4567888887543211111121 1123456788899887655554
No 192
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.34 E-value=0.00075 Score=57.01 Aligned_cols=172 Identities=9% Similarity=0.028 Sum_probs=95.0
Q ss_pred CCCc-EEEEecCCeEEEEE--CCceEE-EEeeCCccccCeEECCCCcEEEE-eCCCceEEEccCC--cEEEeeecCCccc
Q 023085 3 KNGV-IYTATRDGWIKRLQ--DGTWVN-WKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVSEDG--VENFLSYVNGSKL 75 (287)
Q Consensus 3 ~~G~-l~~~~~~g~i~~~~--~~~~~~-~~~~~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~~~g--~~~~~~~~~~~~~ 75 (287)
+++. |..++.++.|..|+ +++... +........ .+++.++|+..++ ...+.|..++..+ ..... . .....
T Consensus 86 ~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~-~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~-~-~~~~~ 162 (343)
T 2xzm_R 86 QENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVY-SVAFSPDNRQILSAGAEREIKLWNILGECKFSSA-E-KENHS 162 (343)
T ss_dssp SSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEE-EEEECSSTTEEEEEETTSCEEEEESSSCEEEECC-T-TTSCS
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEE-EEEECCCCCEEEEEcCCCEEEEEeccCCceeeee-c-ccCCC
Confidence 4554 45566888898898 454332 322233334 8899999975554 4334566666323 22211 1 11112
Q ss_pred cccceEEEcCCC----------cEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCC
Q 023085 76 RFANDVVEASDG----------SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDE 145 (287)
Q Consensus 76 ~~~~~l~~d~~g----------~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 145 (287)
..+..+++.+++ .++++ +..++.|..+|........+.........++++|++
T Consensus 163 ~~v~~~~~~~~~~~~~~~~~~~~~l~s-----------------~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g 225 (343)
T 2xzm_R 163 DWVSCVRYSPIMKSANKVQPFAPYFAS-----------------VGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNG 225 (343)
T ss_dssp SCEEEEEECCCCCSCSCCCSSCCEEEE-----------------EETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTS
T ss_pred ceeeeeeeccccccccccCCCCCEEEE-----------------EcCCCEEEEEcCCCceeEEEcCccccceEEEECCCC
Confidence 345667777655 34443 223567777875432233333334456788999999
Q ss_pred CEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEe
Q 023085 146 DYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 198 (287)
Q Consensus 146 ~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~ 198 (287)
+.|..+. ..+.|..||+...... ...+. .......+++.+++.+..+..
T Consensus 226 ~~l~sgs-~dg~v~iwd~~~~~~~-~~~~~--~~~~v~~v~~sp~~~~la~~~ 274 (343)
T 2xzm_R 226 KYIATGG-KDKKLLIWDILNLTYP-QREFD--AGSTINQIAFNPKLQWVAVGT 274 (343)
T ss_dssp SEEEEEE-TTCEEEEEESSCCSSC-SEEEE--CSSCEEEEEECSSSCEEEEEE
T ss_pred CEEEEEc-CCCeEEEEECCCCccc-ceeec--CCCcEEEEEECCCCCEEEEEC
Confidence 9665554 5678999997322111 11121 122356788889887654443
No 193
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.34 E-value=0.00081 Score=55.74 Aligned_cols=140 Identities=14% Similarity=0.109 Sum_probs=87.1
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCceEEEEe-eCCccccCeEECCCCcEEEE-eCCCceEEEc-cCC--cEEEeeecCCc
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTWVNWKF-IDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG--VENFLSYVNGS 73 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~~~~~~-~~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~-~~g--~~~~~~~~~~~ 73 (287)
.++|. |..++.++.|..|+ +++...... ...... .+.+.++++++++ ...+.|..++ +++ ...+...
T Consensus 74 ~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~---- 148 (312)
T 4ery_A 74 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF-CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH---- 148 (312)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCC----
T ss_pred cCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEE-EEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCC----
Confidence 35664 55666888899998 444333222 222334 7888999976655 4344577788 666 3333211
Q ss_pred cccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-ee-ccccccceEEEccCCCEEEEE
Q 023085 74 KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VA-DGFYFANGVALSRDEDYVVVC 151 (287)
Q Consensus 74 ~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~-~~~~~~~~i~~~~~~~~l~v~ 151 (287)
...+..+++.+++.++++. ...+.|..+|..+++... +. ........++++|+++.++.+
T Consensus 149 -~~~v~~~~~~~~~~~l~~~-----------------~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 210 (312)
T 4ery_A 149 -SDPVSAVHFNRDGSLIVSS-----------------SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 210 (312)
T ss_dssp -SSCEEEEEECTTSSEEEEE-----------------ETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEE
T ss_pred -CCcEEEEEEcCCCCEEEEE-----------------eCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEE
Confidence 2346788899999877752 235678888887665432 22 222234567899999976666
Q ss_pred eCCCCEEEEEEecC
Q 023085 152 ESWKFRCRKYWLKG 165 (287)
Q Consensus 152 ~~~~~~l~~~~~~~ 165 (287)
. ..+.|..||+..
T Consensus 211 ~-~d~~i~iwd~~~ 223 (312)
T 4ery_A 211 T-LDNTLKLWDYSK 223 (312)
T ss_dssp E-TTTEEEEEETTT
T ss_pred c-CCCeEEEEECCC
Confidence 5 467899999754
No 194
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.34 E-value=0.00087 Score=56.07 Aligned_cols=168 Identities=13% Similarity=0.116 Sum_probs=95.5
Q ss_pred cEEEEecCCeEEEEE-C--C-ceE----EEEeeCCccccCeEECCCCcEEEEeCC-CceEEEc-cCC--cEEEeeecCCc
Q 023085 6 VIYTATRDGWIKRLQ-D--G-TWV----NWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VENFLSYVNGS 73 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~-~--~-~~~----~~~~~~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~-~~g--~~~~~~~~~~~ 73 (287)
.|..++.++.|..|+ . . ... .+........ .+++.++|++.++... +.|..++ .++ ...+...
T Consensus 32 ~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~-~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h---- 106 (319)
T 3frx_A 32 LLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQ-DCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGH---- 106 (319)
T ss_dssp EEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC----
T ss_pred EEEEecCCccEEEecCCCCCccccccceEEeCCcccEE-EEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccC----
Confidence 456667888888887 2 1 111 1111222233 7888999986665433 4577777 666 3333221
Q ss_pred cccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCC-----EE
Q 023085 74 KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDED-----YV 148 (287)
Q Consensus 74 ~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~l 148 (287)
...+.++++.+++.++++. ..++.|..+|.+...+..+.........+.+.|... .+
T Consensus 107 -~~~v~~~~~~~~~~~l~s~-----------------s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 107 -KSDVMSVDIDKKASMIISG-----------------SRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp -SSCEEEEEECTTSCEEEEE-----------------ETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCE
T ss_pred -CCcEEEEEEcCCCCEEEEE-----------------eCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccE
Confidence 2357889999999887752 234567777776444444443334445666666322 14
Q ss_pred EEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 149 VVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 149 ~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
+++....+.|..|++...+ ....+. .-......+++.++|++.++...
T Consensus 169 l~s~~~d~~i~~wd~~~~~--~~~~~~-~h~~~v~~~~~sp~g~~l~s~~~ 216 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQFQ--IEADFI-GHNSNINTLTASPDGTLIASAGK 216 (319)
T ss_dssp EEEEETTSCEEEEETTTTE--EEEEEC-CCCSCEEEEEECTTSSEEEEEET
T ss_pred EEEEeCCCEEEEEECCcch--hheeec-CCCCcEEEEEEcCCCCEEEEEeC
Confidence 4444456778888875321 111221 11223567888999987666554
No 195
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.33 E-value=0.00027 Score=59.89 Aligned_cols=143 Identities=10% Similarity=-0.027 Sum_probs=85.8
Q ss_pred CeEECCCCcEEEEe-CCCceEEEc-cCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCC
Q 023085 37 GLTSTKEGHLIICD-NANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPH 113 (287)
Q Consensus 37 ~i~~d~dg~l~v~~-~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~ 113 (287)
.+++.++|++.++. ..+.|..++ .++ ...+..... ....+.++++.+++.++++. ..+
T Consensus 13 ~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~-----------------~~d 73 (372)
T 1k8k_C 13 CHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE--HNGQVTGVDWAPDSNRIVTC-----------------GTD 73 (372)
T ss_dssp EEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEEC--CSSCEEEEEEETTTTEEEEE-----------------ETT
T ss_pred EEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecC--CCCcccEEEEeCCCCEEEEE-----------------cCC
Confidence 88999999866554 344577777 555 333322211 12467889999999877752 234
Q ss_pred ceEEEEeCCCCeeEEe---eccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcc-eeEEeccCCCCCcceeeCC
Q 023085 114 GQLLKYDPSSNITTLV---ADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGK-LETFAENLPGAPDNINLAP 189 (287)
Q Consensus 114 ~~v~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~d~ 189 (287)
+.|..++..+++.... .........++++|+++.++++.. .+.|..|++....... ...+.......+..+++.+
T Consensus 74 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 152 (372)
T 1k8k_C 74 RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSG-SRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP 152 (372)
T ss_dssp SCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEET-TSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT
T ss_pred CeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeC-CCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC
Confidence 5666666665653322 223345677889999987777664 5678888876532111 1222111223466788888
Q ss_pred CCCEEEEEec
Q 023085 190 DGTFWIAIIK 199 (287)
Q Consensus 190 ~G~lwv~~~~ 199 (287)
++++.++...
T Consensus 153 ~~~~l~~~~~ 162 (372)
T 1k8k_C 153 NSVLLAAGSC 162 (372)
T ss_dssp TSSEEEEEET
T ss_pred CCCEEEEEcC
Confidence 8876665543
No 196
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.33 E-value=0.00036 Score=64.05 Aligned_cols=179 Identities=11% Similarity=0.022 Sum_probs=98.8
Q ss_pred CCCCCcEEEEecCCeEEEEE--CCceEE-EEeeCCccccCeEECCCCcEEEEeCCCc-eEEEc-cCC-cEEEeeecCCcc
Q 023085 1 MDKNGVIYTATRDGWIKRLQ--DGTWVN-WKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG-VENFLSYVNGSK 74 (287)
Q Consensus 1 ~d~~G~l~~~~~~g~i~~~~--~~~~~~-~~~~~~~~~~~i~~d~dg~l~v~~~~~g-i~~~~-~~g-~~~~~~~~~~~~ 74 (287)
++++|...+...++.|..++ +++... +........ .+++.|||++.++....+ |...+ .++ ........ + .
T Consensus 26 ~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~-~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~-~-~ 102 (611)
T 1nr0_A 26 NTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTT-VAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIP-V-F 102 (611)
T ss_dssp ECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEE-C-S
T ss_pred eCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceE-EEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeec-c-c
Confidence 35778544333456777787 344333 322233334 889999998766643444 55666 444 21111111 1 1
Q ss_pred ccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCC
Q 023085 75 LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESW 154 (287)
Q Consensus 75 ~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~ 154 (287)
...+.+++++++|...++.... ....+.|+.++.. .....+.........++|+|++..++++.+.
T Consensus 103 ~~~v~~v~fs~dg~~l~~~~~~-------------~~~~~~v~~wd~~-~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~ 168 (611)
T 1nr0_A 103 SGPVKDISWDSESKRIAAVGEG-------------RERFGHVFLFDTG-TSNGNLTGQARAMNSVDFKPSRPFRIISGSD 168 (611)
T ss_dssp SSCEEEEEECTTSCEEEEEECC-------------SSCSEEEEETTTC-CBCBCCCCCSSCEEEEEECSSSSCEEEEEET
T ss_pred CCceEEEEECCCCCEEEEEECC-------------CCceeEEEEeeCC-CCcceecCCCCCceEEEECCCCCeEEEEEeC
Confidence 2367889999999876642110 0112467777643 2222233333456788999998755566566
Q ss_pred CCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 155 KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 155 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
.+.+..|+.... .....+. .-......+++.++|++.++...
T Consensus 169 D~~v~lwd~~~~--~~~~~l~-~H~~~V~~v~fspdg~~las~s~ 210 (611)
T 1nr0_A 169 DNTVAIFEGPPF--KFKSTFG-EHTKFVHSVRYNPDGSLFASTGG 210 (611)
T ss_dssp TSCEEEEETTTB--EEEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred CCeEEEEECCCC--eEeeeec-cccCceEEEEECCCCCEEEEEEC
Confidence 778888885321 1111221 11224567889999987766654
No 197
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.32 E-value=0.00024 Score=60.78 Aligned_cols=231 Identities=12% Similarity=0.022 Sum_probs=125.1
Q ss_pred cEEEEecCCeEEEEE-CC-ceEEEEeeCC--ccccCeEECCCCcEEEE-eCCCceEEEccCC--cEEEeeecCCcccccc
Q 023085 6 VIYTATRDGWIKRLQ-DG-TWVNWKFIDS--QTLVGLTSTKEGHLIIC-DNANGLHKVSEDG--VENFLSYVNGSKLRFA 78 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~-~~-~~~~~~~~~~--~~~~~i~~d~dg~l~v~-~~~~gi~~~~~~g--~~~~~~~~~~~~~~~~ 78 (287)
.|..++.++.|..|+ .+ ....+..... .+...+++.+++++.++ ...+.|..++.++ ...+... ...+
T Consensus 133 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h-----~~~v 207 (383)
T 3ei3_B 133 QLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLH-----KAKV 207 (383)
T ss_dssp EEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECS-----SSCE
T ss_pred EEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccC-----CCcE
Confidence 466667888899998 43 3333332221 22227888999975554 4444577777434 4444321 2467
Q ss_pred ceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCC----CeeEEeeccccccceEEEcc-CCCEEEEEe
Q 023085 79 NDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS----NITTLVADGFYFANGVALSR-DEDYVVVCE 152 (287)
Q Consensus 79 ~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~~~~~~i~~~~-~~~~l~v~~ 152 (287)
.++++.+++. ++++. ..++.|..+|..+ +..............++++| +++.++.+.
T Consensus 208 ~~~~~~~~~~~~l~s~-----------------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 208 THAEFNPRCDWLMATS-----------------SVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp EEEEECSSCTTEEEEE-----------------ETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEE
T ss_pred EEEEECCCCCCEEEEE-----------------eCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEc
Confidence 8899999987 66652 2356777777654 33333223344567889999 998666665
Q ss_pred CCCCEEEEEEecCCCCc-ceeEEecc--CCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccc
Q 023085 153 SWKFRCRKYWLKGERKG-KLETFAEN--LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFI 229 (287)
Q Consensus 153 ~~~~~l~~~~~~~~~~~-~~~~~~~~--~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
..+.|..|++...+.. ....-... ....+-.....+++.+........+..
T Consensus 271 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~------------------------- 324 (383)
T 3ei3_B 271 -QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL------------------------- 324 (383)
T ss_dssp -SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-------------------------
T ss_pred -CCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc-------------------------
Confidence 4678999998643221 11100000 001122234444554444333211100
Q ss_pred cCCCceEEEEECC-CCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeCC
Q 023085 230 TLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQLS 287 (287)
Q Consensus 230 ~~~~~~~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~~ 287 (287)
.+...+.|..++. .++.+..+..... ...+..+... ++++.+++ ..+.|.+++++
T Consensus 325 s~s~d~~i~iwd~~~~~~~~~l~~~~~--~~~~~~~~~s~~g~~l~s~-sd~~i~iw~~~ 381 (383)
T 3ei3_B 325 LLNDKRTIDIYDANSGGLVHQLRDPNA--AGIISLNKFSPTGDVLASG-MGFNILIWNRE 381 (383)
T ss_dssp CTTCCCCEEEEETTTCCEEEEECBTTB--CSCCCEEEECTTSSEEEEE-ETTEEEEEECC
T ss_pred ccCCCCeEEEEecCCCceeeeecCCCC--CceEEEEEEecCccEEEEe-cCCcEEEEecC
Confidence 0223467777875 4777777764221 1234444554 45544444 36788888874
No 198
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.32 E-value=0.00016 Score=62.46 Aligned_cols=220 Identities=12% Similarity=0.012 Sum_probs=122.6
Q ss_pred EecCCeEEEEE-CC--ce----EEEEeeCCccccCeEECC-CCcEEEEeCC-CceEEEc-cCC-c-----EEEeeecCCc
Q 023085 10 ATRDGWIKRLQ-DG--TW----VNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVS-EDG-V-----ENFLSYVNGS 73 (287)
Q Consensus 10 ~~~~g~i~~~~-~~--~~----~~~~~~~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~-~~g-~-----~~~~~~~~~~ 73 (287)
++.+|.|..|+ +. +. ..+........ .+++.+ +++++++... +.|..++ .++ . +.+.... .
T Consensus 53 ~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~-~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~--~ 129 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVL-DIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE--G 129 (402)
T ss_dssp CSSSCCEEEEETTCCEECCTTCCCBCCCSSCEE-EEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE--C
T ss_pred EcCCCEEEEEECccCCCCCCCCceEecCCCCEE-EEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec--C
Confidence 34678888888 22 11 11111122234 788998 7776655434 3466666 443 2 1111110 1
Q ss_pred cccccceEEEcCCC-cEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee---ccccccceEEEccCCCEEE
Q 023085 74 KLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA---DGFYFANGVALSRDEDYVV 149 (287)
Q Consensus 74 ~~~~~~~l~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~l~ 149 (287)
....+..+++.+++ .++++. ..++.|..+|..+++..... ........++++|+++.++
T Consensus 130 h~~~v~~~~~~p~~~~~l~s~-----------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 192 (402)
T 2aq5_A 130 HTKRVGIVAWHPTAQNVLLSA-----------------GCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALIC 192 (402)
T ss_dssp CSSCEEEEEECSSBTTEEEEE-----------------ETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEE
T ss_pred CCCeEEEEEECcCCCCEEEEE-----------------cCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEE
Confidence 12467889999987 566642 23567888888777654333 2334557889999998666
Q ss_pred EEeCCCCEEEEEEecCCCCcceeEE-eccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCcccccc
Q 023085 150 VCESWKFRCRKYWLKGERKGKLETF-AENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQF 228 (287)
Q Consensus 150 v~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
.+. ..+.|..||+...+ ....+ .......+..+++.++|++.++...
T Consensus 193 ~~~-~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~----------------------------- 240 (402)
T 2aq5_A 193 TSC-RDKRVRVIEPRKGT--VVAEKDRPHEGTRPVHAVFVSEGKILTTGFS----------------------------- 240 (402)
T ss_dssp EEE-TTSEEEEEETTTTE--EEEEEECSSCSSSCCEEEECSTTEEEEEEEC-----------------------------
T ss_pred EEe-cCCcEEEEeCCCCc--eeeeeccCCCCCcceEEEEcCCCcEEEEecc-----------------------------
Confidence 665 46789999975431 12222 1111123677888899987776631
Q ss_pred ccCCCceEEEEECCCC-cE-EEEEECCCCccccceEEEEEe--CCEEEEEecCCCeEEEEeC
Q 023085 229 ITLGGGAHLIHVAEDG-TI-IRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 229 ~~~~~~~~v~~~~~~g-~~-~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~~~~i~~~~~ 286 (287)
....+.|..++.+. +. +........ ..+..+..+ +..|++++...+.|.++++
T Consensus 241 --~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~ 297 (402)
T 2aq5_A 241 --RMSERQVALWDTKHLEEPLSLQELDTS---SGVLLPFFDPDTNIVYLCGKGDSSIRYFEI 297 (402)
T ss_dssp --TTCCEEEEEEETTBCSSCSEEEECCCC---SSCEEEEEETTTTEEEEEETTCSCEEEEEE
T ss_pred --CCCCceEEEEcCccccCCceEEeccCC---CceeEEEEcCCCCEEEEEEcCCCeEEEEEe
Confidence 01135677777543 22 333332111 234555554 4567677766677777765
No 199
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.31 E-value=2.7e-05 Score=66.60 Aligned_cols=177 Identities=8% Similarity=-0.051 Sum_probs=93.0
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCceEEEEe---eCCccccCeEECCCCcEEEE-eCCCceEEEc-cCCc--EEEeeecC
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTWVNWKF---IDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDGV--ENFLSYVN 71 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~~~~~~---~~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~-~~g~--~~~~~~~~ 71 (287)
.++|. |..++.++.|..|+ ++....... ...... .+++.+++++.++ ...+.|..++ .++. .......
T Consensus 20 s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~- 97 (377)
T 3dwl_C 20 NSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVT-CVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLL- 97 (377)
T ss_dssp CSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEE-EEEECTTTCCEEEEETTSSEEEC------CCCCEEECC-
T ss_pred CCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEE-EEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEec-
Confidence 45675 44444788888888 443222211 122234 7889999865444 4344566666 4332 1221111
Q ss_pred CccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe----eEEeec-cccccceEEEccCCC
Q 023085 72 GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI----TTLVAD-GFYFANGVALSRDED 146 (287)
Q Consensus 72 ~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~~~~-~~~~~~~i~~~~~~~ 146 (287)
.....+.++++.+++.++++. ...+.|..++..+++ ...+.. .......++++|+++
T Consensus 98 -~~~~~v~~~~~~~~~~~l~~~-----------------~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 159 (377)
T 3dwl_C 98 -RLNRAATFVRWSPNEDKFAVG-----------------SGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNV 159 (377)
T ss_dssp -CCSSCEEEEECCTTSSCCEEE-----------------ESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSS
T ss_pred -ccCCceEEEEECCCCCEEEEE-----------------ecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCC
Confidence 122457788899888765541 234567777766554 233333 344567889999998
Q ss_pred EEEEEeCCCCEEEEEEecCCCCcc-------------eeEEec-cCCCCCcceeeCCCCCEEEEEec
Q 023085 147 YVVVCESWKFRCRKYWLKGERKGK-------------LETFAE-NLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 147 ~l~v~~~~~~~l~~~~~~~~~~~~-------------~~~~~~-~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
.++.+. ..+.|..|++....... ...... ...+....++++++|++.++...
T Consensus 160 ~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 225 (377)
T 3dwl_C 160 LLAAGC-ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGH 225 (377)
T ss_dssp EEEEEE-SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEET
T ss_pred EEEEEe-CCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeC
Confidence 666665 45678889875221100 111110 11223566888999875555543
No 200
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.31 E-value=8.6e-05 Score=65.14 Aligned_cols=173 Identities=11% Similarity=0.032 Sum_probs=101.2
Q ss_pred cEEEEecCCeEEEEE--CCceEEEEee--CCccccCeEECC-CCcEEEEeCC-CceEEEc-cCC-cEEEeeecCCccccc
Q 023085 6 VIYTATRDGWIKRLQ--DGTWVNWKFI--DSQTLVGLTSTK-EGHLIICDNA-NGLHKVS-EDG-VENFLSYVNGSKLRF 77 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~~~~~~~--~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~-~~g-~~~~~~~~~~~~~~~ 77 (287)
.|..|+.+|.|..|+ .+........ ...++.++++.| +++++++... +-|..+| ..+ ...+.... .....
T Consensus 134 ~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~--~~~~~ 211 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSD--TINIW 211 (435)
T ss_dssp CEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCS--SCSCC
T ss_pred EEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccC--CCCcc
Confidence 466788999999998 3433333221 123333889986 6666555434 3466677 555 44443221 11234
Q ss_pred cceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCCCE
Q 023085 78 ANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFR 157 (287)
Q Consensus 78 ~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~ 157 (287)
+..+++++++.++++ +...+.|..+|.++..+..+.........++++|+++.++++....+.
T Consensus 212 ~~~~~~~~~~~~l~~-----------------g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~ 274 (435)
T 4e54_B 212 FCSLDVSASSRMVVT-----------------GDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQT 274 (435)
T ss_dssp CCCEEEETTTTEEEE-----------------ECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSB
T ss_pred EEEEEECCCCCEEEE-----------------EeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcce
Confidence 567889999987775 233567888887755444433334456788999998766666666678
Q ss_pred EEEEEecCCCCc-ceeEEeccCCCCCcceeeCCCCCEEEEEe
Q 023085 158 CRKYWLKGERKG-KLETFAENLPGAPDNINLAPDGTFWIAII 198 (287)
Q Consensus 158 l~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~d~~G~lwv~~~ 198 (287)
|..||+...... ...... .-......++++++|++.++..
T Consensus 275 v~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~spdg~~l~s~~ 315 (435)
T 4e54_B 275 VKIWDLRQVRGKASFLYSL-PHRHPVNAACFSPDGARLLTTD 315 (435)
T ss_dssp CCEEETTTCCSSSCCSBCC-BCSSCEEECCBCTTSSEEEEEE
T ss_pred eeEEecccccccceEEEee-eccccccceeECCCCCeeEEEc
Confidence 888887532211 110000 1112345677888887655544
No 201
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.30 E-value=4.5e-05 Score=71.23 Aligned_cols=131 Identities=6% Similarity=-0.106 Sum_probs=77.9
Q ss_pred CCCCcEEEEecCCeEEEEE--CCceEEEEeeCCc----cccCeEECCCCcE-EEEeCC---------CceEEEc-cCC-c
Q 023085 2 DKNGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQ----TLVGLTSTKEGHL-IICDNA---------NGLHKVS-EDG-V 63 (287)
Q Consensus 2 d~~G~l~~~~~~g~i~~~~--~~~~~~~~~~~~~----~~~~i~~d~dg~l-~v~~~~---------~gi~~~~-~~g-~ 63 (287)
.+||.+.+.+.+|.|..++ +++.......... .. .+++.|||+. ..+... ..++.++ .++ .
T Consensus 25 spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~-~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 103 (723)
T 1xfd_A 25 ISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAI-RYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP 103 (723)
T ss_dssp SSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCS-EEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC
T ss_pred cCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccc-eEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce
Confidence 4677755556778898888 5555444433221 34 7899999974 444322 3467777 566 5
Q ss_pred EEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccc-c--------
Q 023085 64 ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-Y-------- 134 (287)
Q Consensus 64 ~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~-------- 134 (287)
+.+... ......+..++++++|+..+.. ..+.|+.++..+++...+.... .
T Consensus 104 ~~l~~~--~~~~~~~~~~~~SPdG~~la~~------------------~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~ 163 (723)
T 1xfd_A 104 QSLDPP--EVSNAKLQYAGWGPKGQQLIFI------------------FENNIYYCAHVGKQAIRVVSTGKEGVIYNGLS 163 (723)
T ss_dssp EECCCT--TCCSCCCSBCCBCSSTTCEEEE------------------ETTEEEEESSSSSCCEEEECCCBTTTEEEEEC
T ss_pred EeccCC--ccccccccccEECCCCCEEEEE------------------ECCeEEEEECCCCceEEEecCCCCCceECccc
Confidence 444221 1111235678889998643321 1247888888777655543321 1
Q ss_pred ----------ccceEEEccCCCEEEEEeC
Q 023085 135 ----------FANGVALSRDEDYVVVCES 153 (287)
Q Consensus 135 ----------~~~~i~~~~~~~~l~v~~~ 153 (287)
....++|+|||+.|+++..
T Consensus 164 ~~v~~ee~~~~~~~~~~SpDg~~la~~~~ 192 (723)
T 1xfd_A 164 DWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (723)
T ss_dssp CHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred ceeEEEEeccCcceEEECCCCCEEEEEEE
Confidence 1257899999998877653
No 202
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.29 E-value=0.00086 Score=55.15 Aligned_cols=213 Identities=12% Similarity=0.067 Sum_probs=118.2
Q ss_pred CCC-cEEEEecCCeEEEEE--CC---c-eEEEEeeCCccccCeEECCCCc-EEEEeCCCceEEEccCC-cEEEeeecCCc
Q 023085 3 KNG-VIYTATRDGWIKRLQ--DG---T-WVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVSEDG-VENFLSYVNGS 73 (287)
Q Consensus 3 ~~G-~l~~~~~~g~i~~~~--~~---~-~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~~gi~~~~~~g-~~~~~~~~~~~ 73 (287)
++| .|..++.+|.|..|+ +. + ...+........ .+.+ +++ ++.+...+.+..++... ...+...
T Consensus 69 ~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~---- 141 (313)
T 3odt_A 69 SEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVC-SLSF--QDGVVISGSWDKTAKVWKEGSLVYNLQAH---- 141 (313)
T ss_dssp TTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEE-EEEE--ETTEEEEEETTSEEEEEETTEEEEEEECC----
T ss_pred CCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEE-EEEe--cCCEEEEEeCCCCEEEEcCCcEEEecccC----
Confidence 445 466666788887777 21 1 112211122223 5555 344 44445444466665222 3333211
Q ss_pred cccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeec-cccccceEEEccCCCEEEEE
Q 023085 74 KLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-GFYFANGVALSRDEDYVVVC 151 (287)
Q Consensus 74 ~~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~l~v~ 151 (287)
...+..+.+.+ ++..+++ ....+.|..+|.. .....+.. .......++++|++. ++.+
T Consensus 142 -~~~v~~~~~~~~~~~~l~~-----------------~~~d~~i~i~d~~-~~~~~~~~~~~~~i~~~~~~~~~~-~~~~ 201 (313)
T 3odt_A 142 -NASVWDAKVVSFSENKFLT-----------------ASADKTIKLWQND-KVIKTFSGIHNDVVRHLAVVDDGH-FISC 201 (313)
T ss_dssp -SSCEEEEEEEETTTTEEEE-----------------EETTSCEEEEETT-EEEEEECSSCSSCEEEEEEEETTE-EEEE
T ss_pred -CCceeEEEEccCCCCEEEE-----------------EECCCCEEEEecC-ceEEEEeccCcccEEEEEEcCCCe-EEEc
Confidence 13455666665 6665554 1234667777743 23333332 344567788999887 5544
Q ss_pred eCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccC
Q 023085 152 ESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 231 (287)
Q Consensus 152 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
...+.|..|++...+ ....+. ...+....+++.++|.|..++..
T Consensus 202 -~~dg~i~i~d~~~~~--~~~~~~-~~~~~i~~~~~~~~~~l~~~~~d-------------------------------- 245 (313)
T 3odt_A 202 -SNDGLIKLVDMHTGD--VLRTYE-GHESFVYCIKLLPNGDIVSCGED-------------------------------- 245 (313)
T ss_dssp -ETTSEEEEEETTTCC--EEEEEE-CCSSCEEEEEECTTSCEEEEETT--------------------------------
T ss_pred -cCCCeEEEEECCchh--hhhhhh-cCCceEEEEEEecCCCEEEEecC--------------------------------
Confidence 456789999975432 122222 22234677889999976666554
Q ss_pred CCceEEEEECC-CCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 232 GGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 232 ~~~~~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
+.|..++. .++.+..+....+ .+..+... ++++.. ....+.|.++++
T Consensus 246 ---g~v~iwd~~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~-~~~dg~i~iw~~ 294 (313)
T 3odt_A 246 ---RTVRIWSKENGSLKQVITLPAI----SIWSVDCMSNGDIIV-GSSDNLVRIFSQ 294 (313)
T ss_dssp ---SEEEEECTTTCCEEEEEECSSS----CEEEEEECTTSCEEE-EETTSCEEEEES
T ss_pred ---CEEEEEECCCCceeEEEeccCc----eEEEEEEccCCCEEE-EeCCCcEEEEeC
Confidence 57888885 4677777765432 46667665 566554 445667877775
No 203
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.29 E-value=0.00047 Score=68.45 Aligned_cols=172 Identities=15% Similarity=0.102 Sum_probs=102.0
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCceEEEEe-eCCccccCeEECCCCcEEEEeCC-CceEEEc-cCC--cEEEeeecCCc
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTWVNWKF-IDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VENFLSYVNGS 73 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~~~~~~-~~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~-~~g--~~~~~~~~~~~ 73 (287)
.++|. |..++.+|.|..|+ +++...... ...... .+++.++|++.++... +.|..++ .++ ...+..
T Consensus 624 s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~----- 697 (1249)
T 3sfz_A 624 SQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVL-CCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDE----- 697 (1249)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-----
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEE-EEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcC-----
Confidence 45664 55566888899999 444332222 223334 8899999976555433 4577777 666 444322
Q ss_pred cccccceEEEcCC--CcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-eeccccccceEEEccCCCEEEE
Q 023085 74 KLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFYFANGVALSRDEDYVVV 150 (287)
Q Consensus 74 ~~~~~~~l~~d~~--g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~l~v 150 (287)
....+..+++.++ +.+.++ +...+.|..+|..+++... +.........++++|+++.++.
T Consensus 698 ~~~~v~~~~~~~~~~~~~l~s-----------------g~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s 760 (1249)
T 3sfz_A 698 HSEQVNCCHFTNKSNHLLLAT-----------------GSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLAS 760 (1249)
T ss_dssp CSSCEEEEEECSSSSCCEEEE-----------------EETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred CCCcEEEEEEecCCCceEEEE-----------------EeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEE
Confidence 1235677888774 345553 2235678888877666433 3333445678899999996665
Q ss_pred EeCCCCEEEEEEecCCCCcceeEEe------------ccCCCCCcceeeCCCCCEEEEEec
Q 023085 151 CESWKFRCRKYWLKGERKGKLETFA------------ENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~~~~~~~~------------~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
+. ..+.|..|++..... ...+. .........+++.++|+..++...
T Consensus 761 ~s-~dg~v~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~ 818 (1249)
T 3sfz_A 761 CS-ADGTLRLWDVRSANE--RKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK 818 (1249)
T ss_dssp EE-SSSEEEEEEGGGTEE--EEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEET
T ss_pred EE-CCCeEEEEeCCCCcc--cceecccccccccCCccccccceEEEEEECCCCCEEEEEcC
Confidence 54 467899998764311 11110 001113456778899987776654
No 204
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.28 E-value=0.0003 Score=65.48 Aligned_cols=163 Identities=12% Similarity=0.145 Sum_probs=90.3
Q ss_pred CeEEEEE--CCceEEEEeeC---CccccCeEECCCCc-EEEEeCCC-----ceEEEc-cCC--cEEEeeecCCccccccc
Q 023085 14 GWIKRLQ--DGTWVNWKFID---SQTLVGLTSTKEGH-LIICDNAN-----GLHKVS-EDG--VENFLSYVNGSKLRFAN 79 (287)
Q Consensus 14 g~i~~~~--~~~~~~~~~~~---~~~~~~i~~d~dg~-l~v~~~~~-----gi~~~~-~~g--~~~~~~~~~~~~~~~~~ 79 (287)
..|+.++ +++........ ..+. .+++.+||+ |+++.... .|+.++ .+| ...+...........+.
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLT-NLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEE-EEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred eEEEEEECCCCceEeeccCCCCceeEe-eEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 4677777 44433332211 1223 678899997 66654332 578888 565 33332221111111235
Q ss_pred eEEEcC--CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccce-EEEccCCCEEEEEeCCCC
Q 023085 80 DVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANG-VALSRDEDYVVVCESWKF 156 (287)
Q Consensus 80 ~l~~d~--~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~l~v~~~~~~ 156 (287)
.+++.+ +|.++++... .....||.++...+.+..+......... ++++|+++.|+++....+
T Consensus 314 ~~~~sp~~dg~~l~~~~~---------------~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRR---------------DGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp CCEECTTCSSEEEEEECT---------------TSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSC
T ss_pred CceeecCCCCEEEEEEcc---------------CCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCC
Confidence 678888 8875443111 1235789998665555555433222334 689999998988876654
Q ss_pred ----EEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEE
Q 023085 157 ----RCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAI 197 (287)
Q Consensus 157 ----~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~ 197 (287)
.|++++.++.. ...+. .......+++.++|+..+..
T Consensus 379 ~~~~~l~~~d~~~~~---~~~l~--~~~~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 379 PLERHFYCIDIKGGK---TKDLT--PESGMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp TTCBEEEEEETTCCC---CEESC--CSSSEEEEEECTTSSEEEEE
T ss_pred CceEEEEEEEcCCCC---ceecc--CCCceEEEEECCCCCEEEEE
Confidence 78888865432 11111 11224567788888755544
No 205
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.28 E-value=1.8e-05 Score=78.58 Aligned_cols=221 Identities=10% Similarity=0.042 Sum_probs=129.6
Q ss_pred CCCC-cEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCCCceEEEc-cCC--cEEEeeecCCccc
Q 023085 2 DKNG-VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLSYVNGSKL 75 (287)
Q Consensus 2 d~~G-~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g--~~~~~~~~~~~~~ 75 (287)
.++| .|..++.+|.|..|+ +++............ .+++.+++++..+...+.+..++ .++ ...+... .
T Consensus 1012 s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~-~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-----~ 1085 (1249)
T 3sfz_A 1012 TADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVK-DFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCH-----Q 1085 (1249)
T ss_dssp CSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEE-EEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECC-----S
T ss_pred CCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEE-EEEEcCCCcEEEEECCCcEEEEECCCCceeEEEccc-----C
Confidence 3566 466666888899998 444433322223334 77888999888887666688888 666 4444221 2
Q ss_pred cccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-eeccccccceEEEccCCCEEEEEeCC
Q 023085 76 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFYFANGVALSRDEDYVVVCESW 154 (287)
Q Consensus 76 ~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~l~v~~~~ 154 (287)
..+.++++.++|..+++. ...+.|..++..+++... +.........++++|+++.+..+. .
T Consensus 1086 ~~v~~~~~s~d~~~l~s~-----------------s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~-~ 1147 (1249)
T 3sfz_A 1086 GTVLSCAISSDATKFSST-----------------SADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGD-D 1147 (1249)
T ss_dssp SCCCCEEECSSSSSCEEE-----------------CCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEE-T
T ss_pred CcEEEEEECCCCCEEEEE-----------------cCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEe-C
Confidence 357789999998766642 234556667665554322 222233456788999999766665 4
Q ss_pred CCEEEEEEecCCCC-cceeEE-----eccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCcccccc
Q 023085 155 KFRCRKYWLKGERK-GKLETF-----AENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQF 228 (287)
Q Consensus 155 ~~~l~~~~~~~~~~-~~~~~~-----~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
.+.|..|++..++. ...... .....+.+..+++.++|.+.++...
T Consensus 1148 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~g----------------------------- 1198 (1249)
T 3sfz_A 1148 NGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGG----------------------------- 1198 (1249)
T ss_dssp TSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEESS-----------------------------
T ss_pred CCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECCC-----------------------------
Confidence 56788898864321 111000 0112234678999999976665532
Q ss_pred ccCCCceEEEEECC-CCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 229 ITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 229 ~~~~~~~~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
.|..++. .++.+..+.... ..+..+... +++..++.-..+.|.++++
T Consensus 1199 -------~v~vwd~~~g~~~~~~~~~~----~~i~~~~~s~dg~~l~~~~~dg~v~vw~l 1247 (1249)
T 3sfz_A 1199 -------YLKWWNVATGDSSQTFYTNG----TNLKKIHVSPDFRTYVTVDNLGILYILQV 1247 (1249)
T ss_dssp -------SEEEBCSSSCBCCCCCCCSS----CCCCCCEECSSSCCEEEECTTCCEEEECC
T ss_pred -------eEEEEECCCCceeeeeeccC----CcccEEEECCCCCEEEEecCCcEEEEEee
Confidence 4556664 355544444222 234445554 4554455556668887775
No 206
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.28 E-value=0.00083 Score=56.53 Aligned_cols=223 Identities=9% Similarity=-0.018 Sum_probs=122.6
Q ss_pred cEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECC-CCcEEEE-eCCCceEEEc-cCC-cEEEeeecCCccccccc
Q 023085 6 VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTK-EGHLIIC-DNANGLHKVS-EDG-VENFLSYVNGSKLRFAN 79 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~-dg~l~v~-~~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~ 79 (287)
.|..++.+|.|..|+ +++..........+...+++.+ +++++++ ...+.|..++ .++ ......... .....+.
T Consensus 87 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~v~ 165 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVE-GHRDEVL 165 (366)
T ss_dssp EEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTT-SCSSCEE
T ss_pred EEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccc-cccCcee
Confidence 466777889999999 4544333332223333888998 7875555 4445588888 666 322211101 1234678
Q ss_pred eEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee-----------------------------
Q 023085 80 DVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA----------------------------- 130 (287)
Q Consensus 80 ~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----------------------------- 130 (287)
++++++++..+++. ..++.|..+|..+++.....
T Consensus 166 ~~~~~~~~~~l~~~-----------------~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (366)
T 3k26_A 166 SADYDLLGEKIMSC-----------------GMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRD 228 (366)
T ss_dssp EEEECTTSSEEEEE-----------------ETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECS
T ss_pred EEEECCCCCEEEEe-----------------cCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccccc
Confidence 89999998876642 23456777777654321100
Q ss_pred ccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCC------------cceeEEeccCCCCCcceeeCCC--CCEEEE
Q 023085 131 DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERK------------GKLETFAENLPGAPDNINLAPD--GTFWIA 196 (287)
Q Consensus 131 ~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~------------~~~~~~~~~~~~~~~~i~~d~~--G~lwv~ 196 (287)
........++++ ++ ++++....+.|..|++..... .....+. ........+++.++ |++.++
T Consensus 229 ~~~~~v~~~~~~--~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~~l~~ 304 (366)
T 3k26_A 229 IHRNYVDCVRWL--GD-LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD-YSQCDIWYMRFSMDFWQKMLAL 304 (366)
T ss_dssp SCSSCCCEEEEE--TT-EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE-CSSCCSSCCCCEECTTSSEEEE
T ss_pred CCcceEEEEEEc--CC-EEEEEecCCEEEEEeCCCccccccccccCCcchheecccc-ccCCcEEEEEEcCCCCCcEEEE
Confidence 012233456666 55 444445578899999864321 0011111 11223556777666 876665
Q ss_pred EeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCC-c----EEEEEECCCCccccceEEEEEe-CCE
Q 023085 197 IIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDG-T----IIRNLVDPTGQLMSFVTSGLQV-DNH 270 (287)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g-~----~~~~~~~~~~~~~~~~~~~~~~-~g~ 270 (287)
... .+.|..++.+. + ....+.... ....+..+... +++
T Consensus 305 ~~~----------------------------------dg~i~vwd~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~ 348 (366)
T 3k26_A 305 GNQ----------------------------------VGKLYVWDLEVEDPHKAKCTTLTHHK--CGAAIRQTSFSRDSS 348 (366)
T ss_dssp ECT----------------------------------TSCEEEEECCSSSGGGCEEEEECCTT--CCSCEEEEEECTTSS
T ss_pred Eec----------------------------------CCcEEEEECCCCCCccccceEEcccc--cCCceEEEEeCCCCC
Confidence 544 24566666543 2 333444321 02356777775 566
Q ss_pred EEEEecCCCeEEEEeC
Q 023085 271 LYVISLTSNFIGKVQL 286 (287)
Q Consensus 271 l~i~~~~~~~i~~~~~ 286 (287)
+.++.-..+.|.++|+
T Consensus 349 ~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 349 ILIAVCDDASIWRWDR 364 (366)
T ss_dssp EEEEEETTSEEEEEEC
T ss_pred eEEEEeCCCEEEEEEe
Confidence 5555556678888876
No 207
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.27 E-value=0.00036 Score=61.36 Aligned_cols=144 Identities=10% Similarity=0.039 Sum_probs=84.5
Q ss_pred CCCCcE--EEEecCCeEEEEE-C---CceE-EEE--eeCCccccCeEECCCCc-EEEEeCCCceEEEc-cCC-cEE-Eee
Q 023085 2 DKNGVI--YTATRDGWIKRLQ-D---GTWV-NWK--FIDSQTLVGLTSTKEGH-LIICDNANGLHKVS-EDG-VEN-FLS 68 (287)
Q Consensus 2 d~~G~l--~~~~~~g~i~~~~-~---~~~~-~~~--~~~~~~~~~i~~d~dg~-l~v~~~~~gi~~~~-~~g-~~~-~~~ 68 (287)
.++|.. ..++.+|.|..|+ . ++.. .+. .....+. .+++.++|+ |+++.....++.++ .++ ... ...
T Consensus 111 s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~-~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~ 189 (450)
T 2vdu_B 111 TSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPN-AISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQE 189 (450)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEE-EEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCC
T ss_pred cCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCce-EEEEcCCCCEEEEEeCCCcEEEEecCCcccccccce
Confidence 466754 3455788888888 4 3332 222 1223445 889999996 45555444577777 555 221 000
Q ss_pred ecCCccccccceEEEcCC---CcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeE-Eee-ccccccceEEEcc
Q 023085 69 YVNGSKLRFANDVVEASD---GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT-LVA-DGFYFANGVALSR 143 (287)
Q Consensus 69 ~~~~~~~~~~~~l~~d~~---g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~-~~~~~~~~i~~~~ 143 (287)
... .....+.++++.++ +.++++. ...+.|..+|..+++.. .+. ........++|+
T Consensus 190 ~~~-~h~~~v~~~~~sp~~~~~~~l~s~-----------------~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s- 250 (450)
T 2vdu_B 190 PIL-GHVSMLTDVHLIKDSDGHQFIITS-----------------DRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG- 250 (450)
T ss_dssp CSE-ECSSCEEEEEEEECTTSCEEEEEE-----------------ETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-
T ss_pred eee-cccCceEEEEEcCCCCCCcEEEEE-----------------cCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-
Confidence 000 11245778899988 8766642 22456666766555432 222 333456788999
Q ss_pred CCCEEEEEeCCCCEEEEEEecCC
Q 023085 144 DEDYVVVCESWKFRCRKYWLKGE 166 (287)
Q Consensus 144 ~~~~l~v~~~~~~~l~~~~~~~~ 166 (287)
+++.|+.+. ..+.|..||+...
T Consensus 251 d~~~l~s~~-~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 251 KDYLLLSAG-GDDKIFAWDWKTG 272 (450)
T ss_dssp STTEEEEEE-SSSEEEEEETTTC
T ss_pred CCCEEEEEe-CCCeEEEEECCCC
Confidence 898666665 5678999997643
No 208
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.26 E-value=0.0012 Score=54.33 Aligned_cols=214 Identities=9% Similarity=0.073 Sum_probs=116.9
Q ss_pred cEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEE-eCCCceEEEc-cCC--cEEEeeecCCccccccc
Q 023085 6 VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG--VENFLSYVNGSKLRFAN 79 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~-~~g--~~~~~~~~~~~~~~~~~ 79 (287)
.|..++.+|.|..|+ ++...........+...+++.+++++.++ ...+.+..++ .+. ...+.... .....+.
T Consensus 31 ~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~--~~~~~i~ 108 (313)
T 3odt_A 31 KVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLI--GHQGNVC 108 (313)
T ss_dssp EEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEEC--CCSSCEE
T ss_pred EEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchh--hcccCEE
Confidence 577777889999998 44433333332333338899999976555 4333455555 322 12111111 1123456
Q ss_pred eEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEcc-CCCEEEEEeCCCCEE
Q 023085 80 DVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSR-DEDYVVVCESWKFRC 158 (287)
Q Consensus 80 ~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~l~v~~~~~~~l 158 (287)
.+.. ++.++++ +...+.|..+|.. .....+.........+++.+ +++.++.+. ..+.|
T Consensus 109 ~~~~--~~~~l~~-----------------~~~d~~i~~~d~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~i 167 (313)
T 3odt_A 109 SLSF--QDGVVIS-----------------GSWDKTAKVWKEG-SLVYNLQAHNASVWDAKVVSFSENKFLTAS-ADKTI 167 (313)
T ss_dssp EEEE--ETTEEEE-----------------EETTSEEEEEETT-EEEEEEECCSSCEEEEEEEETTTTEEEEEE-TTSCE
T ss_pred EEEe--cCCEEEE-----------------EeCCCCEEEEcCC-cEEEecccCCCceeEEEEccCCCCEEEEEE-CCCCE
Confidence 6666 3444443 2235677778732 33333333344456677777 777666555 45778
Q ss_pred EEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEE
Q 023085 159 RKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLI 238 (287)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 238 (287)
..|+.. .....+..........+++.+++.+..++.. +.|.
T Consensus 168 ~i~d~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d-----------------------------------g~i~ 208 (313)
T 3odt_A 168 KLWQND----KVIKTFSGIHNDVVRHLAVVDDGHFISCSND-----------------------------------GLIK 208 (313)
T ss_dssp EEEETT----EEEEEECSSCSSCEEEEEEEETTEEEEEETT-----------------------------------SEEE
T ss_pred EEEecC----ceEEEEeccCcccEEEEEEcCCCeEEEccCC-----------------------------------CeEE
Confidence 888822 1122222113334567888888885555544 4677
Q ss_pred EECCC-CcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 239 HVAED-GTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 239 ~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
.++.+ ++.+..+....+ .+..+... +++|..++ ..+.|.++++
T Consensus 209 i~d~~~~~~~~~~~~~~~----~i~~~~~~~~~~l~~~~-~dg~v~iwd~ 253 (313)
T 3odt_A 209 LVDMHTGDVLRTYEGHES----FVYCIKLLPNGDIVSCG-EDRTVRIWSK 253 (313)
T ss_dssp EEETTTCCEEEEEECCSS----CEEEEEECTTSCEEEEE-TTSEEEEECT
T ss_pred EEECCchhhhhhhhcCCc----eEEEEEEecCCCEEEEe-cCCEEEEEEC
Confidence 77754 666666664332 46666665 45554444 4456666664
No 209
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.26 E-value=0.00027 Score=60.72 Aligned_cols=213 Identities=11% Similarity=0.029 Sum_probs=124.8
Q ss_pred CccccCeEEC-CCCcEEEEeCC--Cc----eEEEc-c--------CC-c-EEEeeecCCccccccceEEEcCCCcEEEEc
Q 023085 32 SQTLVGLTST-KEGHLIICDNA--NG----LHKVS-E--------DG-V-ENFLSYVNGSKLRFANDVVEASDGSLYFTV 93 (287)
Q Consensus 32 ~~~~~~i~~d-~dg~l~v~~~~--~g----i~~~~-~--------~g-~-~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~ 93 (287)
..|. ++++| .+|+++++... .| +..++ . ++ + +++..-.....+.++..+.+|+.|+|||.|
T Consensus 26 ~~P~-gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~~v~iD~~~rLWVLD 104 (381)
T 3q6k_A 26 MIST-AFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIYQPVIDDCRRLWVVD 104 (381)
T ss_dssp CCCC-EEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEEEEEECTTCEEEEEE
T ss_pred ccee-eeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEeeEEEEcCCCcEEEEe
Confidence 4567 89994 89999999644 22 55555 2 22 4 554321112346788999999999999998
Q ss_pred CCCCCCCcceeeeeecc---CCCceEEEEeCCCC--eeE-Eeec------cccccceEEEc---cC----CCEEEEEeCC
Q 023085 94 SSSKYLPHEYCLDILEG---KPHGQLLKYDPSSN--ITT-LVAD------GFYFANGVALS---RD----EDYVVVCESW 154 (287)
Q Consensus 94 ~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~--~~~-~~~~------~~~~~~~i~~~---~~----~~~l~v~~~~ 154 (287)
.+..-..+.. .. ...-.|+.+|+.++ ++. .+.- ..+..+.++++ ++ +...|++++.
T Consensus 105 tG~~~~~~~~-----~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~ 179 (381)
T 3q6k_A 105 IGSVEYRSRG-----AKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFL 179 (381)
T ss_dssp CSSCSSCSTT-----GGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETT
T ss_pred CCCcCcCCCc-----cccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCC
Confidence 7731110000 01 23347999999888 643 3321 12345678888 22 5689999999
Q ss_pred CCEEEEEEecCCCCccee----------EE-ecc----CCCCCcceeeCCC----C-CEEEEEeccchhHHHHhhcchhH
Q 023085 155 KFRCRKYWLKGERKGKLE----------TF-AEN----LPGAPDNINLAPD----G-TFWIAIIKLDARRMKILNSSKLI 214 (287)
Q Consensus 155 ~~~l~~~~~~~~~~~~~~----------~~-~~~----~~~~~~~i~~d~~----G-~lwv~~~~~~~~~~~~~~~~~~~ 214 (287)
...|.+||+..++..+.. .+ ... .....++|+++++ + .||.+...+
T Consensus 180 ~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-------------- 245 (381)
T 3q6k_A 180 RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-------------- 245 (381)
T ss_dssp TTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC--------------
T ss_pred CCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC--------------
Confidence 999999998754211111 00 000 0123567888765 3 588887662
Q ss_pred HHHHHhCCccccccccCCCceEEEEEC------CC-CcEEEEEECCCCccccceEEEEEe--CCEEEEEecCCCeEEEEe
Q 023085 215 KHVLAAYPKLFSQFITLGGGAHLIHVA------ED-GTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQ 285 (287)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~v~~~~------~~-g~~~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~~~~i~~~~ 285 (287)
..++++. +. ...++.+... | ......+...+ .|.||++....+.|.+.+
T Consensus 246 --------------------~~ly~V~T~~L~~~~~~~~v~~~G~k-g-~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~ 303 (381)
T 3q6k_A 246 --------------------IKVYSVNTKELKQKGGKLNPELLGNR-G-KYNDAIALAYDPKTKVIFFAEANTKQVSCWN 303 (381)
T ss_dssp --------------------SEEEEEEHHHHSSTTCCCCCEEEEEC-C-TTCCEEEEEECTTTCEEEEEESSSSEEEEEE
T ss_pred --------------------CcEEEEEHHHhhCcchhhceEEeeec-C-CCCCcceEEEeCCCCeEEEEeccCCeEEEEe
Confidence 2455552 11 1223333321 1 11233445554 599999999999999876
Q ss_pred C
Q 023085 286 L 286 (287)
Q Consensus 286 ~ 286 (287)
.
T Consensus 304 ~ 304 (381)
T 3q6k_A 304 T 304 (381)
T ss_dssp T
T ss_pred C
Confidence 4
No 210
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.26 E-value=6.4e-05 Score=64.50 Aligned_cols=169 Identities=12% Similarity=0.099 Sum_probs=93.1
Q ss_pred ecCCeEEEEE---CCceEEEE------eeCCccccCeEECCCC-cEEEEeCCCceEEEc-cCC-cEEEeeec--C-----
Q 023085 11 TRDGWIKRLQ---DGTWVNWK------FIDSQTLVGLTSTKEG-HLIICDNANGLHKVS-EDG-VENFLSYV--N----- 71 (287)
Q Consensus 11 ~~~g~i~~~~---~~~~~~~~------~~~~~~~~~i~~d~dg-~l~v~~~~~gi~~~~-~~g-~~~~~~~~--~----- 71 (287)
+.+|.+..++ +++..... .....|. .+...+++ .+|+.+....++.++ ..+ ........ .
T Consensus 170 ~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~ 248 (361)
T 2oiz_A 170 CGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKA 248 (361)
T ss_dssp ETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHH
T ss_pred CCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccc
Confidence 3666776666 34433111 1122333 33334455 455555445577787 433 33322110 0
Q ss_pred -CccccccceEEEcCC-CcEEEEcC-CCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEE
Q 023085 72 -GSKLRFANDVVEASD-GSLYFTVS-SSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYV 148 (287)
Q Consensus 72 -~~~~~~~~~l~~d~~-g~l~v~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 148 (287)
+.....+..++++++ +.+|++.. .+..+. .......|+.+|..++++........ |.+++++|||+.|
T Consensus 249 ~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~--------~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l 319 (361)
T 2oiz_A 249 KNWVPGGYNLVGLHRASGRMYVFMHPDGKEGT--------HKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLM 319 (361)
T ss_dssp TTCEECCSSCEEEETTTTEEEEEEESSCCTTC--------TTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEE
T ss_pred cccccCCeeEEEEecCCCeEEEEEccCCCccc--------ccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEE
Confidence 000112233788887 57888642 100000 00123579999998887654433334 9999999999999
Q ss_pred EEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCC
Q 023085 149 VVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT 192 (287)
Q Consensus 149 ~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~ 192 (287)
|+++. +.|..||.+..++.....+. .....|.+++++++|+
T Consensus 320 ~v~n~--~~v~v~D~~t~~l~~~~~i~-~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 320 LTLDG--GNVNVYDISQPEPKLLRTIE-GAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEECS--SCEEEEECSSSSCEEEEEET-TSCSSEEEEEECCCSC
T ss_pred EEeCC--CeEEEEECCCCcceeeEEec-cCCCCcEEEEecCCCC
Confidence 99884 78999997543212222221 2344689999999985
No 211
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.25 E-value=0.00021 Score=60.54 Aligned_cols=132 Identities=16% Similarity=0.189 Sum_probs=85.5
Q ss_pred eEEEEeCCCCeeEEeec-------cccccceEEE--ccCCC--EEEEEeCCCCEEEEEEecCC---CCc--ceeEEeccC
Q 023085 115 QLLKYDPSSNITTLVAD-------GFYFANGVAL--SRDED--YVVVCESWKFRCRKYWLKGE---RKG--KLETFAENL 178 (287)
Q Consensus 115 ~v~~~~~~~~~~~~~~~-------~~~~~~~i~~--~~~~~--~l~v~~~~~~~l~~~~~~~~---~~~--~~~~~~~~~ 178 (287)
.++.+|+.++++..+.. ....|.|+|+ ++... ++|+.+. .+.+..|++... +.. ..+.+ ..
T Consensus 102 ~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k-~G~~~q~~l~~~~~g~~~~~lVR~f--~l 178 (355)
T 3amr_A 102 EIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK-EGEFEQYELKADKNGYISGKKVRAF--KM 178 (355)
T ss_dssp EEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS-SSEEEEEEEEECTTSCEEEEEEEEE--EC
T ss_pred EEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC-CCeEEEEEEEeCCCCcccceEEEEe--cC
Confidence 45666888777776632 2367899998 77543 4667665 478888887421 111 12222 24
Q ss_pred CCCCcceeeCC-CCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC--C----cEEEEEE
Q 023085 179 PGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED--G----TIIRNLV 251 (287)
Q Consensus 179 ~~~~~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--g----~~~~~~~ 251 (287)
++-|.+++.|+ .|.||++... .+|++|+++ + +.+..+.
T Consensus 179 gsq~EgcvvDd~~g~Lyv~eEd-----------------------------------~GIw~~da~p~~~~~~~~v~~~~ 223 (355)
T 3amr_A 179 NSQTEGMAADDEYGRLYIAEED-----------------------------------EAIWKFSAEPDGGSNGTVIDRAD 223 (355)
T ss_dssp SSCEEEEEEETTTTEEEEEETT-----------------------------------TEEEEEECSTTSCSCCEEEEEBS
T ss_pred CCCcceEEEcCCCCeEEEeccc-----------------------------------ceEEEEeCCcCCCCCceEEEEec
Confidence 55688999986 6899999986 379999843 3 2333322
Q ss_pred CCCCccccceEEEEEe-C----CEEEEEecCCCeEEEEeC
Q 023085 252 DPTGQLMSFVTSGLQV-D----NHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 252 ~~~~~~~~~~~~~~~~-~----g~l~i~~~~~~~i~~~~~ 286 (287)
.+.....+.++... . +.|++++...+...+|+.
T Consensus 224 --~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 224 --GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp --SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred --CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence 23334456777663 2 579999999999999985
No 212
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.23 E-value=0.00025 Score=61.30 Aligned_cols=172 Identities=16% Similarity=0.090 Sum_probs=103.0
Q ss_pred CCC--cEEEEecCCeEEEEE--CCceEEEE--e-eCCccccCeEECCCCcEEE-EeCCCceEEEc-cCC--cEEEeeecC
Q 023085 3 KNG--VIYTATRDGWIKRLQ--DGTWVNWK--F-IDSQTLVGLTSTKEGHLII-CDNANGLHKVS-EDG--VENFLSYVN 71 (287)
Q Consensus 3 ~~G--~l~~~~~~g~i~~~~--~~~~~~~~--~-~~~~~~~~i~~d~dg~l~v-~~~~~gi~~~~-~~g--~~~~~~~~~ 71 (287)
++| .|..++.++.|..|+ +++..... . ...... .+++.++|++++ +...+.|..++ +++ ...+...
T Consensus 141 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-- 217 (402)
T 2aq5_A 141 PTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIY-SVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRP-- 217 (402)
T ss_dssp SSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEE-EEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECS--
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceE-EEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccC--
Confidence 454 356667889999999 44433322 1 222334 788999996544 44445577788 666 3333111
Q ss_pred CccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCee--EEee-ccccccceEEEccCCCEE
Q 023085 72 GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT--TLVA-DGFYFANGVALSRDEDYV 148 (287)
Q Consensus 72 ~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~-~~~~~~~~i~~~~~~~~l 148 (287)
.....+..+++.++|.++++... ....+.|..+|..+++. .... ........++++|+++.|
T Consensus 218 -~~~~~~~~~~~~~~~~~l~~g~~--------------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 282 (402)
T 2aq5_A 218 -HEGTRPVHAVFVSEGKILTTGFS--------------RMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIV 282 (402)
T ss_dssp -SCSSSCCEEEECSTTEEEEEEEC--------------TTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEE
T ss_pred -CCCCcceEEEEcCCCcEEEEecc--------------CCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEE
Confidence 11124678889999987775210 02356788888765432 1111 223345678899999989
Q ss_pred EEEeCCCCEEEEEEecCCC--CcceeEEeccCCCCCcceeeCCCCCEE
Q 023085 149 VVCESWKFRCRKYWLKGER--KGKLETFAENLPGAPDNINLAPDGTFW 194 (287)
Q Consensus 149 ~v~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~d~~G~lw 194 (287)
+++....+.|..|++...+ ......+. ......++++.++|.+.
T Consensus 283 ~~~g~~dg~i~i~d~~~~~~~~~~l~~~~--~~~~v~~~~~sp~~~~~ 328 (402)
T 2aq5_A 283 YLCGKGDSSIRYFEITSEAPFLHYLSMFS--SKESQRGMGYMPKRGLE 328 (402)
T ss_dssp EEEETTCSCEEEEEECSSTTCEEEEEEEC--CSSCCSEEEECCGGGSC
T ss_pred EEEEcCCCeEEEEEecCCCcceEeecccc--cCCcccceEEecccccc
Confidence 8888777889999987543 11222221 22346778888877553
No 213
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.23 E-value=0.0013 Score=55.97 Aligned_cols=218 Identities=11% Similarity=0.055 Sum_probs=120.0
Q ss_pred CCCc-EEEEecCCeEEEEE-C-C-------ceEEEEeeCCccccCeEECCCCcE-EEEeCCCceEEEc-cCC--cEEEee
Q 023085 3 KNGV-IYTATRDGWIKRLQ-D-G-------TWVNWKFIDSQTLVGLTSTKEGHL-IICDNANGLHKVS-EDG--VENFLS 68 (287)
Q Consensus 3 ~~G~-l~~~~~~g~i~~~~-~-~-------~~~~~~~~~~~~~~~i~~d~dg~l-~v~~~~~gi~~~~-~~g--~~~~~~ 68 (287)
++|. |..++.++.+..|+ . . ....+........ .+.+.+++.. ..+...+.|..++ +++ ...+..
T Consensus 116 p~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~ 194 (354)
T 2pbi_B 116 PSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLS-ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG 194 (354)
T ss_dssp TTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEE-EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEE-EEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC
Confidence 4553 44455677777776 1 1 1112222222223 6788888864 4445444577777 666 344321
Q ss_pred ecCCccccccceEEEcC--CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-eeccccccceEEEccCC
Q 023085 69 YVNGSKLRFANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFYFANGVALSRDE 145 (287)
Q Consensus 69 ~~~~~~~~~~~~l~~d~--~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~ 145 (287)
. ...+..+.+.+ +|.++++ +..++.|..+|..+++... +.......+.++++|++
T Consensus 195 h-----~~~v~~~~~~~~~~g~~l~s-----------------gs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~ 252 (354)
T 2pbi_B 195 H-----GADVLCLDLAPSETGNTFVS-----------------GGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSG 252 (354)
T ss_dssp C-----SSCEEEEEECCCSSCCEEEE-----------------EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred C-----CCCeEEEEEEeCCCCCEEEE-----------------EeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCC
Confidence 1 12345566654 5666664 2235678888887776433 33334456788999999
Q ss_pred CEEEEEeCCCCEEEEEEecCCCCcceeEEecc-CCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCcc
Q 023085 146 DYVVVCESWKFRCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 224 (287)
Q Consensus 146 ~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (287)
+.+..+. ..+.|..||+... .....+... .......+++.++|++.++...
T Consensus 253 ~~l~s~s-~D~~v~lwd~~~~--~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~------------------------- 304 (354)
T 2pbi_B 253 DAFASGS-DDATCRLYDLRAD--REVAIYSKESIIFGASSVDFSLSGRLLFAGYN------------------------- 304 (354)
T ss_dssp SEEEEEE-TTSCEEEEETTTT--EEEEEECCTTCCSCEEEEEECTTSSEEEEEET-------------------------
T ss_pred CEEEEEe-CCCeEEEEECCCC--cEEEEEcCCCcccceeEEEEeCCCCEEEEEEC-------------------------
Confidence 8655554 5678899987532 112222111 1112356778889987666654
Q ss_pred ccccccCCCceEEEEECC-CCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEE
Q 023085 225 FSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKV 284 (287)
Q Consensus 225 ~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~ 284 (287)
.+.|..++. .++.+..+.... ..++++... +++..+++-..+.|.++
T Consensus 305 ---------d~~i~vwd~~~~~~~~~l~~h~----~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 305 ---------DYTINVWDVLKGSRVSILFGHE----NRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp ---------TSCEEEEETTTCSEEEEECCCS----SCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred ---------CCcEEEEECCCCceEEEEECCC----CcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 245666764 466666654322 346777765 45544444444455543
No 214
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.21 E-value=0.0008 Score=63.25 Aligned_cols=244 Identities=14% Similarity=0.047 Sum_probs=124.7
Q ss_pred CCCCc-EEEEecC---------CeEEEEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeCCCceEEEc-cCC-cEEE
Q 023085 2 DKNGV-IYTATRD---------GWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVS-EDG-VENF 66 (287)
Q Consensus 2 d~~G~-l~~~~~~---------g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~~gi~~~~-~~g-~~~~ 66 (287)
.+||. |.+++.. +.++.++ +++...+........ ..++.|||+ |..+ ....|+..+ .+| ...+
T Consensus 70 Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~-~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~l 147 (740)
T 4a5s_A 70 SPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQ-WVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRI 147 (740)
T ss_dssp CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEE-EEEECSSTTCEEEE-ETTEEEEESSTTSCCEEC
T ss_pred CCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcce-eeEECCCCCEEEEE-ECCeEEEEECCCCceEEE
Confidence 46774 5565532 5566777 455443322222334 678899996 5444 356799888 666 5554
Q ss_pred eeec-CCcc-------------ccccceEEEcCCCc-EEEE--cCCCCCCCcceee--------------ee---eccC-
Q 023085 67 LSYV-NGSK-------------LRFANDVVEASDGS-LYFT--VSSSKYLPHEYCL--------------DI---LEGK- 111 (287)
Q Consensus 67 ~~~~-~~~~-------------~~~~~~l~~d~~g~-l~v~--~~~~~~~~~~~~~--------------~~---~~~~- 111 (287)
.... .... +....+++..+||. |.++ |.. ....|.. .. ..+.
T Consensus 148 t~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~---~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~ 224 (740)
T 4a5s_A 148 TWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDT---EVPLIEYSFYSDESLQYPKTVRVPYPKAGAV 224 (740)
T ss_dssp CSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECT---TCCEEEEEECCSTTCSSCEEEEEECCBTTSC
T ss_pred cCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEccc---CCceEEEEeecCCCCCCCcceeecCCCCcCc
Confidence 3211 0000 12224578899996 3332 111 1111110 00 0011
Q ss_pred -CCceEEEEeCCC---C---eeEEeec------cccccceEEEccCCCEEE-EEeCCC--CEEEEEEecCCC----Ccce
Q 023085 112 -PHGQLLKYDPSS---N---ITTLVAD------GFYFANGVALSRDEDYVV-VCESWK--FRCRKYWLKGER----KGKL 171 (287)
Q Consensus 112 -~~~~v~~~~~~~---~---~~~~~~~------~~~~~~~i~~~~~~~~l~-v~~~~~--~~l~~~~~~~~~----~~~~ 171 (287)
....|+.+|.++ + +...+.. .......++|+|||+.++ +..... ..|+.++.++++ ....
T Consensus 225 ~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~ 304 (740)
T 4a5s_A 225 NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVA 304 (740)
T ss_dssp CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGG
T ss_pred CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEE
Confidence 123688889887 6 4444432 222345678999998443 333322 268888887543 1111
Q ss_pred eEE-eccCCCC-----CcceeeCCCCCEE--EEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC
Q 023085 172 ETF-AENLPGA-----PDNINLAPDGTFW--IAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED 243 (287)
Q Consensus 172 ~~~-~~~~~~~-----~~~i~~d~~G~lw--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 243 (287)
... .....+. +...++.+||+.+ ..+.. .....|+.++.+
T Consensus 305 ~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~--------------------------------~G~~~l~~~~~~ 352 (740)
T 4a5s_A 305 RQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNE--------------------------------EGYRHICYFQID 352 (740)
T ss_dssp GCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECT--------------------------------TSCEEEEEEETT
T ss_pred EEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcC--------------------------------CCceEEEEEECC
Confidence 111 1111111 3367888999732 23222 113578999988
Q ss_pred CcEEEEEECCCCccccceEE-EEEeCCEEEEEecC------CCeEEEEeC
Q 023085 244 GTIIRNLVDPTGQLMSFVTS-GLQVDNHLYVISLT------SNFIGKVQL 286 (287)
Q Consensus 244 g~~~~~~~~~~~~~~~~~~~-~~~~~g~l~i~~~~------~~~i~~~~~ 286 (287)
++....++... ..+.. ...+++.||+.+.. ...|.++++
T Consensus 353 ~~~~~~lT~g~----~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~ 398 (740)
T 4a5s_A 353 KKDCTFITKGT----WEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQL 398 (740)
T ss_dssp CSSCEESCCSS----SCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEET
T ss_pred CCceEecccCC----EEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEEC
Confidence 87777666422 12222 23457788887765 235666654
No 215
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.21 E-value=0.00074 Score=56.04 Aligned_cols=137 Identities=9% Similarity=0.032 Sum_probs=82.8
Q ss_pred CeEECCCCcEEEEeCC-CceEEEc-cCC--cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCC
Q 023085 37 GLTSTKEGHLIICDNA-NGLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKP 112 (287)
Q Consensus 37 ~i~~d~dg~l~v~~~~-~gi~~~~-~~g--~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ 112 (287)
++++.|+|.+.++... +.|..++ .++ ...+... ...+..+++.+++.+.++ +..
T Consensus 18 ~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~s-----------------~s~ 75 (304)
T 2ynn_A 18 GIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVT-----ETPVRAGKFIARKNWIIV-----------------GSD 75 (304)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC-----SSCEEEEEEEGGGTEEEE-----------------EET
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeecc-----CCcEEEEEEeCCCCEEEE-----------------ECC
Confidence 8999999986665434 4466667 566 3333211 134667888888887775 223
Q ss_pred CceEEEEeCCCCeeE-EeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCC-C
Q 023085 113 HGQLLKYDPSSNITT-LVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-D 190 (287)
Q Consensus 113 ~~~v~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~ 190 (287)
++.|..+|..+++.. .+.........++++|+++.++.+ +..+.|..|++.... .....+. .-......+++.+ +
T Consensus 76 d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg-s~D~~v~lWd~~~~~-~~~~~~~-~h~~~v~~v~~~p~~ 152 (304)
T 2ynn_A 76 DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSG-SDDLTVKLWNWENNW-ALEQTFE-GHEHFVMCVAFNPKD 152 (304)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEE-ETTSCEEEEEGGGTT-EEEEEEC-CCCSCEEEEEECTTC
T ss_pred CCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEE-CCCCeEEEEECCCCc-chhhhhc-ccCCcEEEEEECCCC
Confidence 567888888766643 333344556788999999865554 456789999875421 1111121 1122356678887 5
Q ss_pred CCEEEEEe
Q 023085 191 GTFWIAII 198 (287)
Q Consensus 191 G~lwv~~~ 198 (287)
+.+.++..
T Consensus 153 ~~~l~sgs 160 (304)
T 2ynn_A 153 PSTFASGC 160 (304)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEe
Confidence 56555443
No 216
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.21 E-value=0.00052 Score=64.76 Aligned_cols=171 Identities=12% Similarity=0.037 Sum_probs=99.2
Q ss_pred CCC-cEEEEecCCeEEEEE--CCceEEEEe-eCCccccCeEECCCCcE-EEEeCCCceEEEc-cCC--cEEEeeecCCcc
Q 023085 3 KNG-VIYTATRDGWIKRLQ--DGTWVNWKF-IDSQTLVGLTSTKEGHL-IICDNANGLHKVS-EDG--VENFLSYVNGSK 74 (287)
Q Consensus 3 ~~G-~l~~~~~~g~i~~~~--~~~~~~~~~-~~~~~~~~i~~d~dg~l-~v~~~~~gi~~~~-~~g--~~~~~~~~~~~~ 74 (287)
++| .|.+++.+|.|..|+ +++...... ...... .+++.++|+. ..+...+.|..++ .++ ....... .
T Consensus 65 ~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~----~ 139 (814)
T 3mkq_A 65 ARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR-SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG----H 139 (814)
T ss_dssp GGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEEC----C
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEE-EEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcC----C
Confidence 455 466777889999999 454433322 233344 8899999964 4444444577777 444 2222111 1
Q ss_pred ccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-eecc-ccccceEEEcc--CCCEEE
Q 023085 75 LRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADG-FYFANGVALSR--DEDYVV 149 (287)
Q Consensus 75 ~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~-~~~~~~i~~~~--~~~~l~ 149 (287)
...+..+++.+ ++.++++ +...+.|..++..++.... +... ......++++| ++..++
T Consensus 140 ~~~v~~~~~~p~~~~~l~~-----------------~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (814)
T 3mkq_A 140 EHFVMCVAFNPKDPSTFAS-----------------GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI 202 (814)
T ss_dssp SSCEEEEEEETTEEEEEEE-----------------EETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEE
T ss_pred CCcEEEEEEEcCCCCEEEE-----------------EeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEE
Confidence 23567888888 6766664 2235678888876544322 2222 24456788888 888665
Q ss_pred EEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 150 VCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 150 v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
++. ..+.|..|+....+ ....+. ...+....+++.++|.+.++...
T Consensus 203 ~~~-~dg~i~~~d~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~ 248 (814)
T 3mkq_A 203 TAS-DDLTIKIWDYQTKS--CVATLE-GHMSNVSFAVFHPTLPIIISGSE 248 (814)
T ss_dssp EEC-TTSEEEEEETTTTE--EEEEEE-CCSSCEEEEEECSSSSEEEEEET
T ss_pred EEe-CCCEEEEEECCCCc--EEEEEc-CCCCCEEEEEEcCCCCEEEEEeC
Confidence 554 56789999875421 122222 12233566788888875555543
No 217
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.20 E-value=0.00043 Score=67.70 Aligned_cols=133 Identities=11% Similarity=0.077 Sum_probs=81.8
Q ss_pred cEEEEecCCeEE-EEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeCCCceEEEc-cCC-cEEEeeecCCccccccc
Q 023085 6 VIYTATRDGWIK-RLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFAN 79 (287)
Q Consensus 6 ~l~~~~~~g~i~-~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~ 79 (287)
.|++++..+.|+ .++ .++...+........ .+++++||+ |+++.....|+.++ .+| ...+.... ...+.
T Consensus 350 ~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~-~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~----~~~v~ 424 (1045)
T 1k32_A 350 AFIHGTREGDFLGIYDYRTGKAEKFEENLGNVF-AMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR----EAMIT 424 (1045)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEECCCCCCSEE-EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS----SSCCC
T ss_pred eEEEEECCCceEEEEECCCCCceEecCCcccee-eeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCC----CCCcc
Confidence 455555666777 777 444444332223344 788999997 44555445788898 677 55553221 13457
Q ss_pred eEEEcCCCcEEEEcCC-C--CCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeC
Q 023085 80 DVVEASDGSLYFTVSS-S--KYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCES 153 (287)
Q Consensus 80 ~l~~d~~g~l~v~~~~-~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~ 153 (287)
.++++++|...++... . ++ .......|+.+|..+++...+.........++|+|||+.|++...
T Consensus 425 ~~~~SpDG~~la~~~~~~~~~~----------~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 425 DFTISDNSRFIAYGFPLKHGET----------DGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp CEEECTTSCEEEEEEEECSSTT----------CSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred ceEECCCCCeEEEEecCccccc----------cCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 7899999985443111 0 00 001235799999887876655554455667889999998888765
No 218
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.19 E-value=0.0011 Score=57.71 Aligned_cols=105 Identities=10% Similarity=0.066 Sum_probs=62.3
Q ss_pred cccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCC-CeeEEe--------eccccccceEEEccCC-
Q 023085 76 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NITTLV--------ADGFYFANGVALSRDE- 145 (287)
Q Consensus 76 ~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~--------~~~~~~~~~i~~~~~~- 145 (287)
..+.++++.++|.++++. .++.|..+|..+ ++.... .........++++|++
T Consensus 178 ~~v~~~~~~~~~~~l~s~------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 239 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA------------------DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSC 239 (447)
T ss_dssp SCCCEEEECTTSSEEEEE------------------CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCT
T ss_pred cceEEEEEcCCCCEEEEe------------------CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCC
Confidence 457789999999887752 356777787762 222211 1122345678899998
Q ss_pred CEEEEEeCCCCEEEEEEecCCCCc--ceeEEeccCC-----------CCCcceeeCCCCCEEEEEec
Q 023085 146 DYVVVCESWKFRCRKYWLKGERKG--KLETFAENLP-----------GAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 146 ~~l~v~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~-----------~~~~~i~~d~~G~lwv~~~~ 199 (287)
+.++.+ ...+.|..||+...... ....+..... +....+++.++|++.++...
T Consensus 240 ~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 240 NTFVYS-SSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp TEEEEE-ETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred cEEEEE-eCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 655554 45678999997643321 1222221111 13567888999987666543
No 219
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.19 E-value=0.0019 Score=58.93 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=28.4
Q ss_pred eEEEEECC-CCcEEEEEECCCCccccceEEEEEeCCEEEEEecCC
Q 023085 235 AHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTS 278 (287)
Q Consensus 235 ~~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~ 278 (287)
+.|+.+|. .|+.++.+....+. ...+.. ...+|++|++...+
T Consensus 485 g~l~a~D~~tG~~lw~~~~~~~~-~~~p~~-~~~~G~~yv~~~~G 527 (571)
T 2ad6_A 485 GYLKALDNKDGKELWNFKMPSGG-IGSPMT-YSFKGKQYIGSMYG 527 (571)
T ss_dssp SEEEEEETTTCCEEEEEECSSCC-CSCCEE-EEETTEEEEEEEEC
T ss_pred CeEEEEECCCCCEEEEEeCCCCc-EeeeEE-EEECCEEEEEEECC
Confidence 68999996 49999999875432 222222 23689999987643
No 220
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.19 E-value=0.001 Score=56.85 Aligned_cols=188 Identities=11% Similarity=0.058 Sum_probs=109.4
Q ss_pred CeEECCCCcE-EEEeCC-Cc-eEEEc-cCC--cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeecc
Q 023085 37 GLTSTKEGHL-IICDNA-NG-LHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEG 110 (287)
Q Consensus 37 ~i~~d~dg~l-~v~~~~-~g-i~~~~-~~g--~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~ 110 (287)
.+++.|||++ .+++.. .+ |...+ +++ ...+ .. ...+.++++.++|.+.++.
T Consensus 138 ~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~-~~-----~~~V~~v~fspdg~~l~s~----------------- 194 (365)
T 4h5i_A 138 LVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI-ET-----RGEVKDLHFSTDGKVVAYI----------------- 194 (365)
T ss_dssp EEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE-EC-----SSCCCEEEECTTSSEEEEE-----------------
T ss_pred EEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe-CC-----CCceEEEEEccCCceEEec-----------------
Confidence 5789999974 456533 34 56666 566 2222 11 2357899999999987752
Q ss_pred CCCceEEEEeCCCCeeEEee---ccccccceEEEccCCCEEEEEeCCCC---EEEEEEecCCCCcc--eeEEeccCCCCC
Q 023085 111 KPHGQLLKYDPSSNITTLVA---DGFYFANGVALSRDEDYVVVCESWKF---RCRKYWLKGERKGK--LETFAENLPGAP 182 (287)
Q Consensus 111 ~~~~~v~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~l~v~~~~~~---~l~~~~~~~~~~~~--~~~~~~~~~~~~ 182 (287)
..+.+.+++..+++..... ........++|+|+++.+..+...+. .++.++........ ...+. ......
T Consensus 195 -s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~V 272 (365)
T 4h5i_A 195 -TGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVT-NRFKGI 272 (365)
T ss_dssp -CSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEE-SSCSCE
T ss_pred -cceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeec-CCCCCe
Confidence 1235666665555433221 12234567889999987776654332 46666654321111 11111 122235
Q ss_pred cceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCCccccce
Q 023085 183 DNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFV 261 (287)
Q Consensus 183 ~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~ 261 (287)
..+++.++|++.++... .+.|..+|.+ ++.+..+.. +. ...+
T Consensus 273 ~~~~~Spdg~~lasgs~----------------------------------D~~V~iwd~~~~~~~~~~~~--gH-~~~V 315 (365)
T 4h5i_A 273 TSMDVDMKGELAVLASN----------------------------------DNSIALVKLKDLSMSKIFKQ--AH-SFAI 315 (365)
T ss_dssp EEEEECTTSCEEEEEET----------------------------------TSCEEEEETTTTEEEEEETT--SS-SSCE
T ss_pred EeEEECCCCCceEEEcC----------------------------------CCEEEEEECCCCcEEEEecC--cc-cCCE
Confidence 67889999986665544 2456677754 566655432 21 2357
Q ss_pred EEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 262 TSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 262 ~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
+++.+. ++++.++.-.-+.|.++++
T Consensus 316 ~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 316 TEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 788876 6776666666678888776
No 221
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.18 E-value=0.00038 Score=59.01 Aligned_cols=143 Identities=9% Similarity=0.017 Sum_probs=79.5
Q ss_pred CeEECCCCcEEEEeCC-CceEEEc-cCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCC
Q 023085 37 GLTSTKEGHLIICDNA-NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPH 113 (287)
Q Consensus 37 ~i~~d~dg~l~v~~~~-~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~ 113 (287)
.+++.|+|++.++... +.|..++ .++ ......... .....+.++++.++|.++++. ..+
T Consensus 21 ~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~-----------------s~D 82 (345)
T 3fm0_A 21 FLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSE-GHQRTVRKVAWSPCGNYLASA-----------------SFD 82 (345)
T ss_dssp EEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECS-SCSSCEEEEEECTTSSEEEEE-----------------ETT
T ss_pred EEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeecc-ccCCcEEEEEECCCCCEEEEE-----------------ECC
Confidence 7889999976655433 4466666 444 222111111 123467889999999877752 223
Q ss_pred ceEEEEeCCCCee---EEeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCC
Q 023085 114 GQLLKYDPSSNIT---TLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPD 190 (287)
Q Consensus 114 ~~v~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~ 190 (287)
+.+..++..++.. ..+.........++++|+++.|..+. ..+.|..|++..............-......+++.++
T Consensus 83 ~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s-~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS-RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp SCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred CcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEE-CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC
Confidence 4455554443332 22223334567889999998666554 4677999988643211111111111223456778888
Q ss_pred CCEEEEEe
Q 023085 191 GTFWIAII 198 (287)
Q Consensus 191 G~lwv~~~ 198 (287)
|++.++..
T Consensus 162 ~~~l~s~s 169 (345)
T 3fm0_A 162 QELLASAS 169 (345)
T ss_dssp SSCEEEEE
T ss_pred CCEEEEEe
Confidence 86555443
No 222
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.18 E-value=0.002 Score=56.47 Aligned_cols=217 Identities=11% Similarity=-0.011 Sum_probs=116.7
Q ss_pred CcEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCCCceEEEc-cCC--cEEEeeecCCccccccc
Q 023085 5 GVIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLSYVNGSKLRFAN 79 (287)
Q Consensus 5 G~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g--~~~~~~~~~~~~~~~~~ 79 (287)
+.|..++.+|.|..|+ +++..........++..+++.+++.+..+...+.|..++ .++ ...+. . ....+.
T Consensus 133 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~-~----h~~~v~ 207 (464)
T 3v7d_B 133 NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFE-G----HNSTVR 207 (464)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEEC-C----CSSCEE
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEEC-C----CCCccE
Confidence 3566777889999999 454433322222233378888888666666556688888 666 33332 1 123455
Q ss_pred eEEEc--CCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee----------------------ccccc
Q 023085 80 DVVEA--SDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA----------------------DGFYF 135 (287)
Q Consensus 80 ~l~~d--~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----------------------~~~~~ 135 (287)
.+++. +++.+.++. ..++.|..++..++...... .....
T Consensus 208 ~l~~~~~~~~~~l~s~-----------------s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (464)
T 3v7d_B 208 CLDIVEYKNIKYIVTG-----------------SRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM 270 (464)
T ss_dssp EEEEEESSSCEEEEEE-----------------ETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCS
T ss_pred EEEEecCCCCCEEEEE-----------------cCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCcc
Confidence 66665 455555542 22445666665433211100 00000
Q ss_pred cceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHH
Q 023085 136 ANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIK 215 (287)
Q Consensus 136 ~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~ 215 (287)
..-.+++++++.++.+. ..+.|..||+...+ ....+. ........++++++|+..++...
T Consensus 271 ~~v~~~~~~~~~l~~~~-~d~~i~vwd~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~sg~~---------------- 330 (464)
T 3v7d_B 271 ASVRTVSGHGNIVVSGS-YDNTLIVWDVAQMK--CLYILS-GHTDRIYSTIYDHERKRCISASM---------------- 330 (464)
T ss_dssp SCEEEEEEETTEEEEEE-TTSCEEEEETTTTE--EEEEEC-CCSSCEEEEEEETTTTEEEEEET----------------
T ss_pred ceEEEEcCCCCEEEEEe-CCCeEEEEECCCCc--EEEEec-CCCCCEEEEEEcCCCCEEEEEeC----------------
Confidence 11124567788666665 45779999875321 112221 12234567888888876665544
Q ss_pred HHHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEeC
Q 023085 216 HVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 286 (287)
.+.|..++.+ ++.+..+.... ..+..+..++..|..++ ..+.|.++++
T Consensus 331 ------------------dg~i~vwd~~~~~~~~~~~~h~----~~v~~~~~~~~~l~s~s-~dg~v~vwd~ 379 (464)
T 3v7d_B 331 ------------------DTTIRIWDLENGELMYTLQGHT----ALVGLLRLSDKFLVSAA-ADGSIRGWDA 379 (464)
T ss_dssp ------------------TSCEEEEETTTTEEEEEECCCS----SCEEEEEECSSEEEEEE-TTSEEEEEET
T ss_pred ------------------CCcEEEEECCCCcEEEEEeCCC----CcEEEEEEcCCEEEEEe-CCCcEEEEEC
Confidence 2456667753 66666665332 23556665555554444 4456666665
No 223
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.16 E-value=0.00039 Score=64.81 Aligned_cols=190 Identities=11% Similarity=-0.010 Sum_probs=96.3
Q ss_pred CCCCc-EEEEecC---------CeEEEEE--CCceEEEEeeCC---ccccCeEECCCCc-EEEEeCCCceEEEc-cCC-c
Q 023085 2 DKNGV-IYTATRD---------GWIKRLQ--DGTWVNWKFIDS---QTLVGLTSTKEGH-LIICDNANGLHKVS-EDG-V 63 (287)
Q Consensus 2 d~~G~-l~~~~~~---------g~i~~~~--~~~~~~~~~~~~---~~~~~i~~d~dg~-l~v~~~~~gi~~~~-~~g-~ 63 (287)
.+||. |.+++.+ +.|+.++ +++...+..... ... .+++.|||+ |.++. ...|++++ .++ .
T Consensus 69 SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~-~~~~SPdG~~la~~~-~~~i~~~~~~~g~~ 146 (723)
T 1xfd_A 69 SPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQ-YAGWGPKGQQLIFIF-ENNIYYCAHVGKQA 146 (723)
T ss_dssp CTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCS-BCCBCSSTTCEEEEE-TTEEEEESSSSSCC
T ss_pred CCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccccc-ccEECCCCCEEEEEE-CCeEEEEECCCCce
Confidence 46775 5555432 6777888 455433332221 133 678899996 44444 45799998 666 5
Q ss_pred EEEeeecCCcc--------------ccccceEEEcCCCcEE-EEcCCCCCCCcceeee------------ee---cc--C
Q 023085 64 ENFLSYVNGSK--------------LRFANDVVEASDGSLY-FTVSSSKYLPHEYCLD------------IL---EG--K 111 (287)
Q Consensus 64 ~~~~~~~~~~~--------------~~~~~~l~~d~~g~l~-v~~~~~~~~~~~~~~~------------~~---~~--~ 111 (287)
..+........ +..+.++++.+||+.. ++.... -....|... .. .+ .
T Consensus 147 ~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 225 (723)
T 1xfd_A 147 IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND-SRVPIMELPTYTGSIYPTVKPYHYPKAGSEN 225 (723)
T ss_dssp EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC-TTSCEEEECCCSSSSSCCCEEEECCBTTSCC
T ss_pred EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC-CccceEEeeccCCcCCCcceeccCCCCCCCC
Confidence 55533211000 1133678999999743 331110 001111100 00 00 1
Q ss_pred CCceEEEEeCCCCee-EEeecc------ccccceEEEccCCCEEEEEeCC---CCEEEEEEecCCCCcceeEEeccCCCC
Q 023085 112 PHGQLLKYDPSSNIT-TLVADG------FYFANGVALSRDEDYVVVCESW---KFRCRKYWLKGERKGKLETFAENLPGA 181 (287)
Q Consensus 112 ~~~~v~~~~~~~~~~-~~~~~~------~~~~~~i~~~~~~~~l~v~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~ 181 (287)
....|+.+|..+++. ..+... ......++|+|||+.++..... ...|+.+|+++++.. ........+.
T Consensus 226 ~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~ 303 (723)
T 1xfd_A 226 PSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCT--KKHEDESEAW 303 (723)
T ss_dssp CEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEE--EEEEEECSSC
T ss_pred CeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcce--EEEEeccCCE
Confidence 123688888876663 333321 2233568899999866544322 235778887543221 1111111122
Q ss_pred ----CcceeeCCCCC-EEEE
Q 023085 182 ----PDNINLAPDGT-FWIA 196 (287)
Q Consensus 182 ----~~~i~~d~~G~-lwv~ 196 (287)
+..+++.+||+ |++.
T Consensus 304 ~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 304 LHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp CCCCCCCCEECTTSCSEEEE
T ss_pred EeccCCCceEcCCCCeEEEE
Confidence 23688889986 5544
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.14 E-value=3.8e-05 Score=66.12 Aligned_cols=128 Identities=4% Similarity=-0.128 Sum_probs=83.6
Q ss_pred eEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeC---------CCCEEEEEEecCCCCcceeEE-ecc-----CC
Q 023085 115 QLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCES---------WKFRCRKYWLKGERKGKLETF-AEN-----LP 179 (287)
Q Consensus 115 ~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~---------~~~~l~~~~~~~~~~~~~~~~-~~~-----~~ 179 (287)
.|..+|+.++++.........| +++++||++.+|+++. ..+.|..+|....+. ...+ ... ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v--v~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP--IADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE--EEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE--EEEEECCCccccccC
Confidence 7889999988866544444567 8999999999999983 356799999764322 1111 110 01
Q ss_pred CCCcceeeCCCC-CEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEE--ECCCCcEEEEEECCCCc
Q 023085 180 GAPDNINLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIH--VAEDGTIIRNLVDPTGQ 256 (287)
Q Consensus 180 ~~~~~i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~g~~~~~~~~~~~~ 256 (287)
..|.++++++|| .+|++.... ...+.. +|+.. +..+..+.+
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~---------------------------------~~~v~V~~iD~~t--v~~i~v~~~- 167 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGS---------------------------------SAAAGLSVPGASD--DQLTKSASC- 167 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSS---------------------------------SCEEEEEETTTEE--EEEEECSSC-
T ss_pred CCcceEEEcCCCCEEEEEccCC---------------------------------CCeEEEEEEchhh--ceEEECCCc-
Confidence 359999999999 588887531 124555 77655 455554332
Q ss_pred cccceEEEEEeCCEEEEEecCCCeEEEEeC
Q 023085 257 LMSFVTSGLQVDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 257 ~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 286 (287)
..+..++.++|++....+.+.++++
T Consensus 168 -----~~~~p~g~~~~~~~~~dg~~~~vd~ 192 (368)
T 1mda_H 168 -----FHIHPGAAATHYLGSCPASLAASDL 192 (368)
T ss_dssp -----CCCEEEETTEEECCCCTTSCEEEEC
T ss_pred -----eEEccCCCeEEEEEcCCCCEEEEEC
Confidence 1234456677777776667776665
No 225
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.13 E-value=0.00019 Score=66.34 Aligned_cols=150 Identities=15% Similarity=0.043 Sum_probs=85.9
Q ss_pred CCCc--EEEEeC-CCceEEEccC----C-cEEEeeecCCccccccceEEEcCCCcE-EEEcCCCCCCCcceeeeeeccCC
Q 023085 42 KEGH--LIICDN-ANGLHKVSED----G-VENFLSYVNGSKLRFANDVVEASDGSL-YFTVSSSKYLPHEYCLDILEGKP 112 (287)
Q Consensus 42 ~dg~--l~v~~~-~~gi~~~~~~----g-~~~~~~~~~~~~~~~~~~l~~d~~g~l-~v~~~~~~~~~~~~~~~~~~~~~ 112 (287)
|||+ |.++.. ...|+.++.+ + ...+...........+..+++++||.. +++....+. ......
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~--------~~~~~~ 159 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTG--------EGPSDV 159 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECS--------SSTTCE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccC--------CCCCCc
Confidence 8885 454443 2468888843 6 555533211001234567889999964 443110000 000012
Q ss_pred CceEEEEeCCC------CeeEEee-ccccccceEEEccCCCEEEEEeCCC-------CEEEEEEec-CCCCcceeEEecc
Q 023085 113 HGQLLKYDPSS------NITTLVA-DGFYFANGVALSRDEDYVVVCESWK-------FRCRKYWLK-GERKGKLETFAEN 177 (287)
Q Consensus 113 ~~~v~~~~~~~------~~~~~~~-~~~~~~~~i~~~~~~~~l~v~~~~~-------~~l~~~~~~-~~~~~~~~~~~~~ 177 (287)
...|+.++..+ ++...+. ........++++|||+.|+++.... ..|+.++++ ++...+...+...
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 24799999887 6666555 4444556788999999888776432 479999987 3322233333322
Q ss_pred CCCCCcceeeCCCCCEEEEEec
Q 023085 178 LPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 178 ~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
....+..+++.+||++++.+..
T Consensus 240 ~~~~~~~~~~spdg~l~~~~~~ 261 (662)
T 3azo_A 240 PEEAIAQAEWAPDGSLIVATDR 261 (662)
T ss_dssp TTBCEEEEEECTTSCEEEEECT
T ss_pred CCceEcceEECCCCeEEEEECC
Confidence 2234566888999997776654
No 226
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.13 E-value=0.00062 Score=64.21 Aligned_cols=178 Identities=13% Similarity=0.116 Sum_probs=100.0
Q ss_pred CCCC-cEEEEecCCeEEEEE--CCceEEEEee--CCccccCeEECCC--CcEEEE-eCCCceEEEc-cCC-cEEEeeecC
Q 023085 2 DKNG-VIYTATRDGWIKRLQ--DGTWVNWKFI--DSQTLVGLTSTKE--GHLIIC-DNANGLHKVS-EDG-VENFLSYVN 71 (287)
Q Consensus 2 d~~G-~l~~~~~~g~i~~~~--~~~~~~~~~~--~~~~~~~i~~d~d--g~l~v~-~~~~gi~~~~-~~g-~~~~~~~~~ 71 (287)
+++| .|..++.+|.|..|+ ++........ ...++..+++.++ +++.++ ...+.|..++ .++ ........
T Consensus 18 s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~- 96 (753)
T 3jro_A 18 DYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHA- 96 (753)
T ss_dssp CSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEEC-
T ss_pred CCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccccccc-
Confidence 4566 466777899999998 3333332222 1223337888776 765554 4334577777 555 33333221
Q ss_pred CccccccceEEEcCC--CcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe---eEEeeccccccceEEEcc---
Q 023085 72 GSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI---TTLVADGFYFANGVALSR--- 143 (287)
Q Consensus 72 ~~~~~~~~~l~~d~~--g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~~~i~~~~--- 143 (287)
.....+.++++.++ +.++++ +..++.|..+|..++. .............++++|
T Consensus 97 -~h~~~V~~v~~sp~~~~~~l~s-----------------gs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 97 -VHSASVNSVQWAPHEYGPLLLV-----------------ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (753)
T ss_dssp -CCSSCEEEEEECCGGGCSEEEE-----------------EETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-
T ss_pred -CCCCCeEEEEECCCCCCCEEEE-----------------EeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccc
Confidence 12246788899988 877665 2335677778776542 122222333456677887
Q ss_pred ----------CCCEEEEEeCCCCEEEEEEecCCCCc-ceeEEeccCCCCCcceeeCCC---CCEEEEEec
Q 023085 144 ----------DEDYVVVCESWKFRCRKYWLKGERKG-KLETFAENLPGAPDNINLAPD---GTFWIAIIK 199 (287)
Q Consensus 144 ----------~~~~l~v~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~d~~---G~lwv~~~~ 199 (287)
+++.++.+. ..+.|..|++...... ........-.+....+++.++ |++.++...
T Consensus 159 ~~~~~~~~~~d~~~l~sgs-~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVTGG-ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp --------CGGGCCEEEEE-TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred ccccccccCCCCCEEEEEE-CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 466555554 4677999998643211 111111112234567888888 766555544
No 227
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.11 E-value=0.00011 Score=67.08 Aligned_cols=160 Identities=14% Similarity=0.094 Sum_probs=93.4
Q ss_pred cEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEE-eCC----CceEEEc-cCC-cEEEeeecCCcccc
Q 023085 6 VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIIC-DNA----NGLHKVS-EDG-VENFLSYVNGSKLR 76 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~-~~~----~gi~~~~-~~g-~~~~~~~~~~~~~~ 76 (287)
.+++....+.+..|+ +++.+.+..... . .++++|||+.++. ... ..|++++ .+| .+.+... ..
T Consensus 124 ~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~-~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~-----~~ 195 (582)
T 3o4h_A 124 VVFTGATEDRVALYALDGGGLRELARLPG--F-GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSG-----EG 195 (582)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEEEEESS--C-EEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCS-----SC
T ss_pred EEEEecCCCCceEEEccCCcEEEeecCCC--c-eEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecC-----CC
Confidence 345544555566667 566555544433 5 7889999986663 222 2488888 677 6665322 12
Q ss_pred ccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEE--------EccCCCEE
Q 023085 77 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVA--------LSRDEDYV 148 (287)
Q Consensus 77 ~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~--------~~~~~~~l 148 (287)
.+..+++.+||+..++.. ......|+.+|.++++...+......+..++ ++|||. +
T Consensus 196 ~~~~~~~SpDG~~l~~~~---------------~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~ 259 (582)
T 3o4h_A 196 SFSSASISPGMKVTAGLE---------------TAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGR-L 259 (582)
T ss_dssp EEEEEEECTTSCEEEEEE---------------CSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSC-E
T ss_pred ccccceECCCCCEEEEcc---------------CCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCc-E
Confidence 357789999997555311 1122379999998777663222222233445 999995 6
Q ss_pred EEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEe
Q 023085 149 VVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 198 (287)
Q Consensus 149 ~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~ 198 (287)
+++....+.+..|++ +. ... ...+....++++ +|+++++..
T Consensus 260 ~~~~~~~g~~~l~~~-g~----~~~---~~~~~v~~~~~s-dg~~l~~~s 300 (582)
T 3o4h_A 260 AVVARREGRSAVFID-GE----RVE---APQGNHGRVVLW-RGKLVTSHT 300 (582)
T ss_dssp EEEEEETTEEEEEET-TE----EEC---CCSSEEEEEEEE-TTEEEEEEE
T ss_pred EEEEEcCCcEEEEEE-CC----eec---cCCCceEEEEec-CCEEEEEEc
Confidence 666555677777776 21 111 111234456777 777665543
No 228
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.11 E-value=0.00017 Score=62.25 Aligned_cols=167 Identities=11% Similarity=0.081 Sum_probs=91.8
Q ss_pred ecCCeEEEEE--CCce---EEEEeeCCccccCeEECCCCcEEE-EeCCCceEEEc-cC---CcEEEeeecCCccccccce
Q 023085 11 TRDGWIKRLQ--DGTW---VNWKFIDSQTLVGLTSTKEGHLII-CDNANGLHKVS-ED---GVENFLSYVNGSKLRFAND 80 (287)
Q Consensus 11 ~~~g~i~~~~--~~~~---~~~~~~~~~~~~~i~~d~dg~l~v-~~~~~gi~~~~-~~---g~~~~~~~~~~~~~~~~~~ 80 (287)
+.++.|..|+ ++.. ........... .+++.+++++.+ +...+.|..++ .. +...+.... .....+.+
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~--~h~~~v~~ 118 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFN-DLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFS--NHSSSVKT 118 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEE-EEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECC--CSSSCCCE
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceE-EEEECCCCCeEEEEccCCeEEEeecccccccccchhhcc--CCccceEE
Confidence 4567788888 3321 11111222334 788999996544 44444577777 44 222221111 12246788
Q ss_pred EEEcCC-CcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe------eEEe----eccccccceEEEccCCCEEE
Q 023085 81 VVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI------TTLV----ADGFYFANGVALSRDEDYVV 149 (287)
Q Consensus 81 l~~d~~-g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~~~----~~~~~~~~~i~~~~~~~~l~ 149 (287)
+++.++ +.++++. ...+.|..+|..+++ .... .........++++|++..++
T Consensus 119 ~~~~~~~~~~l~s~-----------------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 181 (416)
T 2pm9_A 119 VKFNAKQDNVLASG-----------------GNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVF 181 (416)
T ss_dssp EEECSSSTTBEEEE-----------------CSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEE
T ss_pred EEEcCCCCCEEEEE-----------------cCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEE
Confidence 999987 6766652 234678878876554 1111 12233456789999844455
Q ss_pred EEeCCCCEEEEEEecCCCCcceeEEeccC-----CCCCcceeeCCCC-CEEEEEec
Q 023085 150 VCESWKFRCRKYWLKGERKGKLETFAENL-----PGAPDNINLAPDG-TFWIAIIK 199 (287)
Q Consensus 150 v~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~d~~G-~lwv~~~~ 199 (287)
++....+.|..|++...+ ....+.... ......+++.++| ++.++...
T Consensus 182 ~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 235 (416)
T 2pm9_A 182 ASAGSSNFASIWDLKAKK--EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATG 235 (416)
T ss_dssp EEESSSSCEEEEETTTTE--EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEEC
T ss_pred EEEcCCCCEEEEECCCCC--cceEEeccccccccCCceEEEEECCCCCCEEEEEEC
Confidence 555567789999975431 111221111 2346678888887 45554443
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.10 E-value=0.0037 Score=58.22 Aligned_cols=40 Identities=20% Similarity=0.219 Sum_probs=27.0
Q ss_pred eEEEEECCC-CcEEEEEECCCCccccceEEEEEeCCEEEEEec
Q 023085 235 AHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISL 276 (287)
Q Consensus 235 ~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~ 276 (287)
+.+..+|.+ |+.++.+..+.+. ...+... ..+|+.|++..
T Consensus 498 g~l~a~D~~tG~~lw~~~~~~~~-~~~p~~y-~~~G~~~v~~~ 538 (677)
T 1kb0_A 498 GRLVAYHAATGEKLWEAPTGTGV-VAAPSTY-MVDGRQYVSVA 538 (677)
T ss_dssp SEEEEEETTTCCEEEEEECSSCC-CSCCEEE-EETTEEEEEEE
T ss_pred CcEEEEECCCCceeeeeeCCCCc-ccCCEEE-EeCCEEEEEEe
Confidence 688999964 9999999876543 2223322 36788888653
No 230
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.10 E-value=0.0016 Score=60.70 Aligned_cols=168 Identities=14% Similarity=0.163 Sum_probs=97.2
Q ss_pred cEEEEecCCeEEEEE-C-C-c----eE-EEEeeCCccccCeEECCCCcEEEEeCC-CceEEEc-cCC--cEEEeeecCCc
Q 023085 6 VIYTATRDGWIKRLQ-D-G-T----WV-NWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VENFLSYVNGS 73 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~-~-~-~----~~-~~~~~~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~-~~g--~~~~~~~~~~~ 73 (287)
.|..++.++.|..|+ . . . .. .+........ .+++.++|++.++... +.|..++ .++ ...+..
T Consensus 397 ~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~-~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~----- 470 (694)
T 3dm0_A 397 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVE-DVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVG----- 470 (694)
T ss_dssp EEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-----
T ss_pred EEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEE-EEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeC-----
Confidence 355667889898888 2 1 1 11 1222222334 7889999986665433 4577777 666 333321
Q ss_pred cccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeec----cccccceEEEccCCC-EE
Q 023085 74 KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD----GFYFANGVALSRDED-YV 148 (287)
Q Consensus 74 ~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~-~l 148 (287)
....+.++++.+++...++. ..++.|..+|........+.. .......++++|++. .+
T Consensus 471 h~~~v~~~~~s~~~~~l~s~-----------------s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 471 HTKDVLSVAFSLDNRQIVSA-----------------SRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp CSSCEEEEEECTTSSCEEEE-----------------ETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred CCCCEEEEEEeCCCCEEEEE-----------------eCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 12357889999998877752 234567777765333332221 122345678888762 24
Q ss_pred EEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 149 VVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 149 ~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
+++.+..+.|..||+...+. ...+. .-.+....++++++|++.++...
T Consensus 534 l~s~s~d~~v~vwd~~~~~~--~~~~~-~h~~~v~~v~~spdg~~l~sg~~ 581 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKL--RSTLA-GHTGYVSTVAVSPDGSLCASGGK 581 (694)
T ss_dssp EEEEETTSCEEEEETTTCCE--EEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEeCCCeEEEEECCCCcE--EEEEc-CCCCCEEEEEEeCCCCEEEEEeC
Confidence 55555667899999754321 11221 12234567889999987766654
No 231
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.09 E-value=0.0015 Score=54.97 Aligned_cols=136 Identities=6% Similarity=0.055 Sum_probs=84.7
Q ss_pred cEEEEecCCeEEEEE--CCce-EEEEeeC-----CccccCeEECCC----CcEE-EEeCCCceEEEc-cCC--cEEEeee
Q 023085 6 VIYTATRDGWIKRLQ--DGTW-VNWKFID-----SQTLVGLTSTKE----GHLI-ICDNANGLHKVS-EDG--VENFLSY 69 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~-~~~~~~~-----~~~~~~i~~d~d----g~l~-v~~~~~gi~~~~-~~g--~~~~~~~ 69 (287)
.++++..++.|..|+ +++. ..+.... .... .+++.++ |+++ .+...+.|..++ .++ ...+..
T Consensus 36 ~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~- 113 (366)
T 3k26_A 36 LVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFY-TCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG- 113 (366)
T ss_dssp EEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEE-EEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES-
T ss_pred eEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEE-EEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecC-
Confidence 366666777888888 3332 2332211 2233 6777777 5444 445444577788 556 333321
Q ss_pred cCCccccccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee----ccccccceEEEccC
Q 023085 70 VNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA----DGFYFANGVALSRD 144 (287)
Q Consensus 70 ~~~~~~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----~~~~~~~~i~~~~~ 144 (287)
....+.++++.+ ++.++++. ..++.|..+|..+++..... ........++++|+
T Consensus 114 ----~~~~i~~~~~~~~~~~~l~s~-----------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 114 ----HGNAINELKFHPRDPNLLLSV-----------------SKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp ----CCSCEEEEEECSSCTTEEEEE-----------------ETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT
T ss_pred ----CCCcEEEEEECCCCCCEEEEE-----------------eCCCeEEEEEeecCeEEEEecccccccCceeEEEECCC
Confidence 124678899998 78877752 23567888888777654443 23345678899999
Q ss_pred CCEEEEEeCCCCEEEEEEecC
Q 023085 145 EDYVVVCESWKFRCRKYWLKG 165 (287)
Q Consensus 145 ~~~l~v~~~~~~~l~~~~~~~ 165 (287)
++.++.+. ..+.|..|++..
T Consensus 173 ~~~l~~~~-~dg~i~i~d~~~ 192 (366)
T 3k26_A 173 GEKIMSCG-MDHSLKLWRINS 192 (366)
T ss_dssp SSEEEEEE-TTSCEEEEESCS
T ss_pred CCEEEEec-CCCCEEEEECCC
Confidence 98766665 457899999764
No 232
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.09 E-value=0.00092 Score=56.61 Aligned_cols=176 Identities=9% Similarity=0.080 Sum_probs=93.2
Q ss_pred CCCcEEEEe-cCCeEEEEE-CCceEEEEeeCCccccCeEECC----CC----cEEEEeCC---CceEE--Ec-cCC-cEE
Q 023085 3 KNGVIYTAT-RDGWIKRLQ-DGTWVNWKFIDSQTLVGLTSTK----EG----HLIICDNA---NGLHK--VS-EDG-VEN 65 (287)
Q Consensus 3 ~~G~l~~~~-~~g~i~~~~-~~~~~~~~~~~~~~~~~i~~d~----dg----~l~v~~~~---~gi~~--~~-~~g-~~~ 65 (287)
+...++++| ..++|+.|+ +|+....... +.++ ++.+-+ .| .+++++.. +.|.. ++ .++ ++.
T Consensus 38 p~~s~ii~t~k~~gL~Vydl~G~~l~~~~~-g~~n-nVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 38 PQNSKLITTNKKSGLVVYSLDGKMLHSYNT-GKLN-NVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGGCEEEEEETTTEEEEEETTSCEEEEECC-SCEE-EEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CCccEEEEEcCCCCEEEEcCCCcEEEEccC-CCcc-cEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 445667777 678999999 8877665432 3333 333322 12 13455543 33444 45 344 444
Q ss_pred Eeee--cCCccccccceEEE--cCC-Cc--EEEEcCCCCCCCcceeeeeeccCCCceEEE--EeC-CCCeeE----Eeec
Q 023085 66 FLSY--VNGSKLRFANDVVE--ASD-GS--LYFTVSSSKYLPHEYCLDILEGKPHGQLLK--YDP-SSNITT----LVAD 131 (287)
Q Consensus 66 ~~~~--~~~~~~~~~~~l~~--d~~-g~--l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~-~~~~~~----~~~~ 131 (287)
+... ..+..+..|.+++. ++. |. +|+++ ..+.+.. +.. ..+.+. +-..
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~------------------k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTG------------------KEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEEC------------------SSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEEC------------------CCCeEEEEEEEeCCCCcccceEEEEec
Confidence 4211 00122357888877 664 54 55543 2234433 321 223221 1122
Q ss_pred cccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEe----ccCCCCCcceeeC--CCC--CEEEEEec
Q 023085 132 GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFA----ENLPGAPDNINLA--PDG--TFWIAIIK 199 (287)
Q Consensus 132 ~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~d--~~G--~lwv~~~~ 199 (287)
....+.++++++....||+++.. ..||+|+.+...-.+...+. ..+...+.||++. ++| .|++++..
T Consensus 178 lgsq~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG 252 (355)
T 3amr_A 178 MNSQTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQG 252 (355)
T ss_dssp CSSCEEEEEEETTTTEEEEEETT-TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGG
T ss_pred CCCCcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCC
Confidence 23578899999988899999986 56999996532111111111 1122357889884 444 46666654
No 233
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.07 E-value=0.0034 Score=58.61 Aligned_cols=182 Identities=9% Similarity=0.068 Sum_probs=94.2
Q ss_pred CCCCc-EEEEe-cCC----eEEEEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeCCCc----------------eE
Q 023085 2 DKNGV-IYTAT-RDG----WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANG----------------LH 56 (287)
Q Consensus 2 d~~G~-l~~~~-~~g----~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~~g----------------i~ 56 (287)
.+||. |.++. ..| .|+.++ +++............ +++..+||+ |+++..... |+
T Consensus 133 SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~-~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~ 211 (710)
T 2xdw_A 133 SEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFS-CMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLY 211 (710)
T ss_dssp CTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSC-CEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEE
T ss_pred CCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccc-eEEEEeCCCEEEEEEECCccccccccccccCCCCEEE
Confidence 35674 44444 233 677788 555544322222223 789999995 666643333 77
Q ss_pred EEc-cCC-cE-EEeeecCCccccccceEEEcCCCcE-EEEcCCCCCCCcceeeeeeccCCCceEEEEeCCC------C--
Q 023085 57 KVS-EDG-VE-NFLSYVNGSKLRFANDVVEASDGSL-YFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS------N-- 124 (287)
Q Consensus 57 ~~~-~~g-~~-~~~~~~~~~~~~~~~~l~~d~~g~l-~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~-- 124 (287)
+.+ .++ .+ .+...... ......++.++++|.. .++... .......|+.+|..+ +
T Consensus 212 ~~~l~t~~~~~~~v~~~~~-~~~~~~~~~~SpDg~~l~~~~~~-------------~~~~~~~l~~~d~~~~~~~~~~~~ 277 (710)
T 2xdw_A 212 YHVLGTDQSEDILCAEFPD-EPKWMGGAELSDDGRYVLLSIRE-------------GCDPVNRLWYCDLQQESNGITGIL 277 (710)
T ss_dssp EEETTSCGGGCEEEECCTT-CTTCEEEEEECTTSCEEEEEEEC-------------SSSSCCEEEEEEGGGSSSSSCSSC
T ss_pred EEECCCCcccceEEeccCC-CCeEEEEEEEcCCCCEEEEEEEc-------------cCCCccEEEEEECcccccccCCcc
Confidence 777 444 22 22211111 1123457788999863 332110 001145788888764 3
Q ss_pred eeEEeeccccccceEEEccCCCEEEEEeCC---CCEEEEEEecCCCCcceeEEeccCC-CCCcceeeCCCCCEEEEEec
Q 023085 125 ITTLVADGFYFANGVALSRDEDYVVVCESW---KFRCRKYWLKGERKGKLETFAENLP-GAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 125 ~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~lwv~~~~ 199 (287)
.+..+...... ....++++|+.+|+.... ..+|+.++++++.....+.+..... ....++++.+++.++++...
T Consensus 278 ~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~ 355 (710)
T 2xdw_A 278 KWVKLIDNFEG-EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLH 355 (710)
T ss_dssp CCEEEECSSSS-CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEE
T ss_pred ceEEeeCCCCc-EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEE
Confidence 34444332222 222478899988887653 2479999976543222233332211 12344566556667766654
No 234
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.06 E-value=0.0043 Score=52.93 Aligned_cols=218 Identities=9% Similarity=-0.014 Sum_probs=116.6
Q ss_pred cEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECC---CCcE-EEEeCCCceEEEc-cCC--cEEEeeecCCcccc
Q 023085 6 VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTK---EGHL-IICDNANGLHKVS-EDG--VENFLSYVNGSKLR 76 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~---dg~l-~v~~~~~gi~~~~-~~g--~~~~~~~~~~~~~~ 76 (287)
.|..++.+|.|..|+ +++............ .+.+.+ ++.+ .++...+.|..++ .++ ...+.. ...
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-----~~~ 187 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFNFEETVY-SHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG-----HRQ 187 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECC-----CCS
T ss_pred EEEEEeCCCeEEEeeCCCCccceeccCCCcee-eeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecC-----CCC
Confidence 466677889999999 444433333333333 555655 4434 4445445688888 666 444321 123
Q ss_pred ccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe--eEEe---------------eccccccce
Q 023085 77 FANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI--TTLV---------------ADGFYFANG 138 (287)
Q Consensus 77 ~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~---------------~~~~~~~~~ 138 (287)
.+.++++.+++. ++++. ...+.|..+|..++. +..+ .........
T Consensus 188 ~v~~~~~~~~~~~ll~~~-----------------~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 250 (408)
T 4a11_B 188 EILAVSWSPRYDYILATA-----------------SADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNG 250 (408)
T ss_dssp CEEEEEECSSCTTEEEEE-----------------ETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEE
T ss_pred cEEEEEECCCCCcEEEEE-----------------cCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeE
Confidence 567889998886 55541 234567777765432 1111 011223467
Q ss_pred EEEccCCCEEEEEeCCCCEEEEEEecCCCCcce-e-EEecc-CCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHH
Q 023085 139 VALSRDEDYVVVCESWKFRCRKYWLKGERKGKL-E-TFAEN-LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIK 215 (287)
Q Consensus 139 i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~-~-~~~~~-~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~ 215 (287)
++++|+++.++.+.. .+.|..|++...+.... . ..... ..........+..+.+.++...
T Consensus 251 ~~~~~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 313 (408)
T 4a11_B 251 LCFTSDGLHLLTVGT-DNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG---------------- 313 (408)
T ss_dssp EEECTTSSEEEEEET-TSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET----------------
T ss_pred EEEcCCCCEEEEecC-CCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC----------------
Confidence 889999987776654 56799999764321110 0 00000 0111111222334455555443
Q ss_pred HHHHhCCccccccccCCCceEEEEECC-CCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 216 HVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
+.|..++. .++.+..+.... ..+.++... ++++.+++-..+.|.++++
T Consensus 314 -------------------~~i~v~d~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~s~~~dg~i~iw~~ 363 (408)
T 4a11_B 314 -------------------STIAVYTVYSGEQITMLKGHY----KTVDCCVFQSNFQELYSGSRDCNILAWVP 363 (408)
T ss_dssp -------------------TEEEEEETTTCCEEEEECCCS----SCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred -------------------CEEEEEECcCCcceeeeccCC----CeEEEEEEcCCCCEEEEECCCCeEEEEeC
Confidence 46777774 466666665433 245666665 4454444445566777665
No 235
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.01 E-value=0.006 Score=52.94 Aligned_cols=110 Identities=7% Similarity=0.011 Sum_probs=68.0
Q ss_pred CeEECCCCcEEEEeCCCceEEEc-cCC---cEEEeee--cCCccccccceEEEcCCC-cEEEEcCCCCCCCcceeeeeec
Q 023085 37 GLTSTKEGHLIICDNANGLHKVS-EDG---VENFLSY--VNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILE 109 (287)
Q Consensus 37 ~i~~d~dg~l~v~~~~~gi~~~~-~~g---~~~~~~~--~~~~~~~~~~~l~~d~~g-~l~v~~~~~~~~~~~~~~~~~~ 109 (287)
.+++.++|+++++...+.|..++ ..+ ...+... ........+..+++++++ .++++.
T Consensus 182 ~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~---------------- 245 (447)
T 3dw8_B 182 SISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYS---------------- 245 (447)
T ss_dssp EEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEE----------------
T ss_pred EEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEE----------------
Confidence 78899999877766434566677 422 2222100 011122357889999998 777752
Q ss_pred cCCCceEEEEeCCCCee-----EEeecccc------------ccceEEEccCCCEEEEEeCCCCEEEEEEecC
Q 023085 110 GKPHGQLLKYDPSSNIT-----TLVADGFY------------FANGVALSRDEDYVVVCESWKFRCRKYWLKG 165 (287)
Q Consensus 110 ~~~~~~v~~~~~~~~~~-----~~~~~~~~------------~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~ 165 (287)
...+.|..+|..+++. ..+..... ....++++|+++.|..+.. +.|..||+..
T Consensus 246 -~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~ 315 (447)
T 3dw8_B 246 -SSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNM 315 (447)
T ss_dssp -ETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTC
T ss_pred -eCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCC
Confidence 2356788888776553 33322221 4577899999997666654 7899999753
No 236
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.98 E-value=0.0083 Score=54.96 Aligned_cols=43 Identities=16% Similarity=0.255 Sum_probs=28.8
Q ss_pred ceEEEEECCC-CcEEEEEECCCCccccceEEEEEeCCEEEEEecCC
Q 023085 234 GAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTS 278 (287)
Q Consensus 234 ~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~ 278 (287)
.+.|..+|.+ |+.++.+..+.+. ...+... ..+|++||+...+
T Consensus 493 dg~l~A~D~~tG~~lW~~~l~~g~-~~~P~~y-~~~G~qyv~~~~G 536 (599)
T 1w6s_A 493 DGYLKARDSDTGDLLWKFKIPSGA-IGYPMTY-THKGTQYVAIYYG 536 (599)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCC-CSCCEEE-EETTEEEEEEEEC
T ss_pred CCeEEEEECCCCCEEEEeeCCCCc-EeccEEE-EeCCEEEEEEEcc
Confidence 3688899964 9999999876553 2223222 4688988876543
No 237
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.98 E-value=0.00016 Score=61.67 Aligned_cols=145 Identities=11% Similarity=0.034 Sum_probs=78.8
Q ss_pred ccCeEECCCCcEEEEe-CCCceEEEc-cCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccC
Q 023085 35 LVGLTSTKEGHLIICD-NANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGK 111 (287)
Q Consensus 35 ~~~i~~d~dg~l~v~~-~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~ 111 (287)
+..+++.++|++.++. ..+.|..++ .++ ....... . .....+.++++.+++.++++. .
T Consensus 14 v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~-~h~~~v~~~~~s~~~~~l~s~-----------------s 74 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTF-S-DHDKIVTCVDWAPKSNRIVTC-----------------S 74 (377)
T ss_dssp CSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCB-C-CCSSCEEEEEECTTTCCEEEE-----------------E
T ss_pred EEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEE-e-cCCceEEEEEEeCCCCEEEEE-----------------e
Confidence 3389999999866654 333466666 444 2332211 1 122467889999998766642 2
Q ss_pred CCceEEEEeCCCCe----eEEeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCC-cceeEEeccCCCCCccee
Q 023085 112 PHGQLLKYDPSSNI----TTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERK-GKLETFAENLPGAPDNIN 186 (287)
Q Consensus 112 ~~~~v~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~i~ 186 (287)
.++.|..++..+++ ...+.........++++|+++.++.+.. .+.|..|++...+. .....+..........++
T Consensus 75 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~ 153 (377)
T 3dwl_C 75 QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSG-ARVISVCYFEQENDWWVSKHLKRPLRSTILSLD 153 (377)
T ss_dssp TTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEES-SSCEEECCC-----CCCCEEECSSCCSCEEEEE
T ss_pred CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEec-CCeEEEEEECCcccceeeeEeecccCCCeEEEE
Confidence 34567777766554 2222333345567889999987766654 56788888764321 112222211233466788
Q ss_pred eCCCCCEEEEEec
Q 023085 187 LAPDGTFWIAIIK 199 (287)
Q Consensus 187 ~d~~G~lwv~~~~ 199 (287)
+.++|++.++...
T Consensus 154 ~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 154 WHPNNVLLAAGCA 166 (377)
T ss_dssp ECTTSSEEEEEES
T ss_pred EcCCCCEEEEEeC
Confidence 8888875555443
No 238
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.98 E-value=0.0078 Score=54.87 Aligned_cols=58 Identities=10% Similarity=0.094 Sum_probs=38.0
Q ss_pred CCcEEEEecCCeEEEEE--CCceEEEEeeCC-----ccccCeEECCCCcEEEEeC------CCceEEEc-cCC
Q 023085 4 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDS-----QTLVGLTSTKEGHLIICDN------ANGLHKVS-EDG 62 (287)
Q Consensus 4 ~G~l~~~~~~g~i~~~~--~~~~~~~~~~~~-----~~~~~i~~d~dg~l~v~~~------~~gi~~~~-~~g 62 (287)
+|.||+++.++.|+.+| +|+......... ......++. ++.+|++.. ...|+.+| .+|
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG 186 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTG 186 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCC
Confidence 57899999999999999 676643333222 111122232 678999875 34689999 777
No 239
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.98 E-value=0.0023 Score=54.07 Aligned_cols=132 Identities=11% Similarity=0.002 Sum_probs=73.5
Q ss_pred CeEECCCCcEEEEe-CCCceEEEc-cCC-cEEEeeecCCccccccceEEEcCC--CcEEEEcCCCCCCCcceeeeeeccC
Q 023085 37 GLTSTKEGHLIICD-NANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGK 111 (287)
Q Consensus 37 ~i~~d~dg~l~v~~-~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~--g~l~v~~~~~~~~~~~~~~~~~~~~ 111 (287)
.+++.++|++.++. ..+.|..++ ..+ ........ + ....+.++++.++ +.++++. .
T Consensus 16 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~-h~~~v~~~~~~~~~~~~~l~s~-----------------~ 76 (379)
T 3jrp_A 16 DAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-G-HEGPVWRVDWAHPKFGTILASC-----------------S 76 (379)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-C-CSSCEEEEEECCGGGCSEEEEE-----------------E
T ss_pred EEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec-C-CCCcEEEEEeCCCCCCCEEEEe-----------------c
Confidence 78899999765554 334466666 433 22221111 1 1235678888755 7776652 2
Q ss_pred CCceEEEEeCCCCeeEE---eeccccccceEEEccC--CCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCccee
Q 023085 112 PHGQLLKYDPSSNITTL---VADGFYFANGVALSRD--EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNIN 186 (287)
Q Consensus 112 ~~~~v~~~~~~~~~~~~---~~~~~~~~~~i~~~~~--~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 186 (287)
.++.|..+|..+++... +.........++++|+ ++.++++. ..+.|..|++..........+. ........++
T Consensus 77 ~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~-~~~~~v~~~~ 154 (379)
T 3jrp_A 77 YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS-SDGKVSVVEFKENGTTSPIIID-AHAIGVNSAS 154 (379)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-TTSEEEEEECCTTSCCCEEEEE-CCTTCEEEEE
T ss_pred cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEec-CCCcEEEEecCCCCceeeEEec-CCCCceEEEE
Confidence 34566666666564222 2223345677889998 77666665 4678999998653222221221 1222345666
Q ss_pred eCC
Q 023085 187 LAP 189 (287)
Q Consensus 187 ~d~ 189 (287)
+.+
T Consensus 155 ~~~ 157 (379)
T 3jrp_A 155 WAP 157 (379)
T ss_dssp ECC
T ss_pred EcC
Confidence 776
No 240
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.97 E-value=0.005 Score=50.93 Aligned_cols=169 Identities=14% Similarity=0.062 Sum_probs=85.2
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCc--eEEE--EeeCCccccCeEECC--CCcEEEE-eCCCceEEEc-cCC-c------
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGT--WVNW--KFIDSQTLVGLTSTK--EGHLIIC-DNANGLHKVS-EDG-V------ 63 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~--~~~~--~~~~~~~~~~i~~d~--dg~l~v~-~~~~gi~~~~-~~g-~------ 63 (287)
+++|. |..++.+|.|..|+ ++. .+.. ......++..+++.+ +++++++ ...+.|..++ ..+ .
T Consensus 20 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 99 (351)
T 3f3f_A 20 DFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRR 99 (351)
T ss_dssp CSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCS
T ss_pred cCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccC
Confidence 45674 66677889999998 221 1111 112222332788887 5765554 4334466666 443 1
Q ss_pred -EEEeeecCCccccccceEEEcCC--CcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-ee---------
Q 023085 64 -ENFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VA--------- 130 (287)
Q Consensus 64 -~~~~~~~~~~~~~~~~~l~~d~~--g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~--------- 130 (287)
..+.... .....+.++++.++ +.++++. ...+.|..+|..+++... +.
T Consensus 100 ~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~-----------------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 100 WNKLCTLN--DSKGSLYSVKFAPAHLGLKLACL-----------------GNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp EEEEEEEC--CCSSCEEEEEECCGGGCSEEEEE-----------------ETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred cceeeeec--ccCCceeEEEEcCCCCCcEEEEe-----------------cCCCcEEEecCCChHHhccccccccccccc
Confidence 2222211 12245778889988 8766642 235677777765443211 00
Q ss_pred ----ccccccceEEEccC---CCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCC
Q 023085 131 ----DGFYFANGVALSRD---EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDG 191 (287)
Q Consensus 131 ----~~~~~~~~i~~~~~---~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G 191 (287)
........+.++|+ ++.+.++.. .+.+..++...........+. .-......+++.++|
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p~~ 226 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSAL-EQAIIYQRGKDGKLHVAAKLP-GHKSLIRSISWAPSI 226 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEET-TEEEEEEECTTSCEEEEEECC-CCCSCEEEEEECCCS
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEecC-CCcEEEEccCCCceeeeeecC-CCCcceeEEEECCCC
Confidence 11223456778886 775666553 344433332222111111111 112235567777776
No 241
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=97.97 E-value=0.00021 Score=61.92 Aligned_cols=172 Identities=13% Similarity=0.162 Sum_probs=96.4
Q ss_pred CCcEEEEecCC----eEEEEE-CC-ceEEEEeeC---Cc----------cccCeEECC---CCcEEEEeCCCceEEEccC
Q 023085 4 NGVIYTATRDG----WIKRLQ-DG-TWVNWKFID---SQ----------TLVGLTSTK---EGHLIICDNANGLHKVSED 61 (287)
Q Consensus 4 ~G~l~~~~~~g----~i~~~~-~~-~~~~~~~~~---~~----------~~~~i~~d~---dg~l~v~~~~~gi~~~~~~ 61 (287)
++.||+++..| +|++.. .| .++...... .. .+..+++++ .+.||++....+|++.+..
T Consensus 67 ~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~Dg 146 (394)
T 3b7f_A 67 PERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDH 146 (394)
T ss_dssp TTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESST
T ss_pred CCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCC
Confidence 68999999777 899887 33 444443211 00 111467775 6789998766789988755
Q ss_pred C--cEEEeeecC--------------CccccccceEEEcC--CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCC
Q 023085 62 G--VENFLSYVN--------------GSKLRFANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS 123 (287)
Q Consensus 62 g--~~~~~~~~~--------------~~~~~~~~~l~~d~--~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 123 (287)
| ++.+..... +.....+..|++++ .+.+|++. ..++|++.+...
T Consensus 147 G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~------------------~~ggl~~s~DgG 208 (394)
T 3b7f_A 147 GASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGM------------------SSGGVFESTDAG 208 (394)
T ss_dssp TSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEE------------------ETBEEEEESSTT
T ss_pred CCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEE------------------CCCCEEEECCCC
Confidence 5 555432110 01112456788886 46899952 234688776553
Q ss_pred CeeEEeeccc-------------cccceEEEccC-CCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCC----CCcce
Q 023085 124 NITTLVADGF-------------YFANGVALSRD-EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPG----APDNI 185 (287)
Q Consensus 124 ~~~~~~~~~~-------------~~~~~i~~~~~-~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~i 185 (287)
..++.+.... .....++++++ .+.||+.. ...|++.+..+.+ .+.+....+. ....+
T Consensus 209 ~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~--~~gl~~s~D~G~t---W~~~~~~l~~~~~~~~~~i 283 (394)
T 3b7f_A 209 TDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN--HCGIYRMDRREGV---WKRIGDAMPREVGDIGFPI 283 (394)
T ss_dssp SSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE--TTEEEEEETTTTE---EECGGGGSCTTTCSCEEEE
T ss_pred CCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc--CCeEEEeCCCCCc---ceECCCCCCCCCccceEEE
Confidence 4455443211 12356777775 35788876 3568777633321 1111111111 12346
Q ss_pred eeC--CCCCEEEEEe
Q 023085 186 NLA--PDGTFWIAII 198 (287)
Q Consensus 186 ~~d--~~G~lwv~~~ 198 (287)
++| ..+.||+++.
T Consensus 284 ~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 284 VVHQRDPRTVWVFPM 298 (394)
T ss_dssp EECSSCTTCEEEEEC
T ss_pred EECCCCCCEEEEEec
Confidence 777 4578999874
No 242
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.97 E-value=0.00078 Score=56.30 Aligned_cols=215 Identities=14% Similarity=0.053 Sum_probs=115.0
Q ss_pred CCCc--EEEEecCCeEEEEE---CCceEEEEe--eCCccccCeEECCCCcE-EEEeCCCceEEEc-cC--C-cEE--Eee
Q 023085 3 KNGV--IYTATRDGWIKRLQ---DGTWVNWKF--IDSQTLVGLTSTKEGHL-IICDNANGLHKVS-ED--G-VEN--FLS 68 (287)
Q Consensus 3 ~~G~--l~~~~~~g~i~~~~---~~~~~~~~~--~~~~~~~~i~~d~dg~l-~v~~~~~gi~~~~-~~--g-~~~--~~~ 68 (287)
++|. |+.++.+|.|..|+ .++...+.. ...... .+++.+ +++ +.+...+.|..++ .+ + ... ...
T Consensus 66 ~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~-~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 143 (342)
T 1yfq_A 66 DNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGIC-RICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN 143 (342)
T ss_dssp ESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEE-EEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESC
T ss_pred CCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceE-EEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCe
Confidence 3455 77777888888887 233333332 222334 778888 654 4445444577776 43 1 100 000
Q ss_pred ecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCC-Ce--eEEee-ccccccceEEEcc-
Q 023085 69 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NI--TTLVA-DGFYFANGVALSR- 143 (287)
Q Consensus 69 ~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~--~~~~~-~~~~~~~~i~~~~- 143 (287)
...-.....+.++++.+++ ++++ ...+.|..++..+ +. ..... ........++++|
T Consensus 144 ~~~~~~~~~v~~~~~~~~~-l~~~------------------~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 204 (342)
T 1yfq_A 144 SNNTKVKNKIFTMDTNSSR-LIVG------------------MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPK 204 (342)
T ss_dssp SSSSSSCCCEEEEEECSSE-EEEE------------------ESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSG
T ss_pred eeEEeeCCceEEEEecCCc-EEEE------------------eCCCeEEEEECCccccccceeeecCCCCceeEEEECCC
Confidence 0000122456778888776 5553 2346788888765 32 22222 2233457788999
Q ss_pred CCCEEEEEeCCCCEEEEEEecCC--C--CcceeEEeccC--------CCCCcceeeCCCCCEEEEEeccchhHHHHhhcc
Q 023085 144 DEDYVVVCESWKFRCRKYWLKGE--R--KGKLETFAENL--------PGAPDNINLAPDGTFWIAIIKLDARRMKILNSS 211 (287)
Q Consensus 144 ~~~~l~v~~~~~~~l~~~~~~~~--~--~~~~~~~~~~~--------~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~ 211 (287)
+++.++++. ..+.+..++.+.. . ......+.... .+....+++.++|++.++...
T Consensus 205 ~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------------ 271 (342)
T 1yfq_A 205 EQEGYACSS-IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS------------ 271 (342)
T ss_dssp GGCEEEEEE-TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET------------
T ss_pred CCCEEEEEe-cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC------------
Confidence 898666665 4677888877543 0 11122222111 114567888888875554443
Q ss_pred hhHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEECC-CCccccceEEEEEeCCEEEEEecC
Q 023085 212 KLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDP-TGQLMSFVTSGLQVDNHLYVISLT 277 (287)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~-~~~~~~~~~~~~~~~g~l~i~~~~ 277 (287)
.+.|..++.+ ++.+..+... .+ .+..+..++..|..++..
T Consensus 272 ----------------------dg~i~vwd~~~~~~~~~~~~~h~~----~v~~~~~~~~~l~s~s~D 313 (342)
T 1yfq_A 272 ----------------------DGIISCWNLQTRKKIKNFAKFNED----SVVKIACSDNILCLATSD 313 (342)
T ss_dssp ----------------------TSCEEEEETTTTEEEEECCCCSSS----EEEEEEECSSEEEEEEEC
T ss_pred ----------------------CceEEEEcCccHhHhhhhhcccCC----CceEecCCCCeEEEEecC
Confidence 2467777765 5556665543 22 345555334555555543
No 243
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.97 E-value=0.0048 Score=52.54 Aligned_cols=189 Identities=13% Similarity=0.068 Sum_probs=90.2
Q ss_pred CCCCc-EEEEe-c--CCeEEEEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeCCCceEEEc-cCC-cEEEeeecCC
Q 023085 2 DKNGV-IYTAT-R--DGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVS-EDG-VENFLSYVNG 72 (287)
Q Consensus 2 d~~G~-l~~~~-~--~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~~gi~~~~-~~g-~~~~~~~~~~ 72 (287)
.+||. |.+.. . ...|+.++ +++..............+.+.+||+ |+++.....|++++ .++ ...+.....+
T Consensus 44 SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 123 (396)
T 3c5m_A 44 TQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEE 123 (396)
T ss_dssp CTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT
T ss_pred CCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccc
Confidence 46774 44543 2 23677777 4554444333223231377899996 54555445699998 556 5544332111
Q ss_pred ccccccc--eEEEcCCC---cEEEEcCCCCCCCcceeeeee---ccCCCceEEEEeCCCCeeEEeeccccccceEEEcc-
Q 023085 73 SKLRFAN--DVVEASDG---SLYFTVSSSKYLPHEYCLDIL---EGKPHGQLLKYDPSSNITTLVADGFYFANGVALSR- 143 (287)
Q Consensus 73 ~~~~~~~--~l~~d~~g---~l~v~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~- 143 (287)
..+. .+++.... .+|..... +.......... .......|+.+|..+++...+.........+.++|
T Consensus 124 ---~~~~g~~l~~~~~~~~~~~~~~~~~--~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~ 198 (396)
T 3c5m_A 124 ---WKGYGTWVANSDCTKLVGIEILKRD--WQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPF 198 (396)
T ss_dssp ---EEEEEEEEECTTSSEEEEEEEEGGG--CCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETT
T ss_pred ---cCCCCCEEEeccCCccccccccccc--cCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCC
Confidence 0011 11111000 01110000 00000000000 01234579999988777666554334456678899
Q ss_pred CCCEEEEEeCCC-----CEEEEEEecCCCCcceeEEeccC-CCCCcceeeCCCCC-EEEEEe
Q 023085 144 DEDYVVVCESWK-----FRCRKYWLKGERKGKLETFAENL-PGAPDNINLAPDGT-FWIAII 198 (287)
Q Consensus 144 ~~~~l~v~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~d~~G~-lwv~~~ 198 (287)
+++.+++..... ..|+.++.++.. ........ ...+..+++.++|+ |+++..
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (396)
T 3c5m_A 199 DDSTVGFCHEGPHDLVDARMWLVNEDGSN---VRKIKEHAEGESCTHEFWIPDGSAMAYVSY 257 (396)
T ss_dssp EEEEEEEEECSCSSSCSCCCEEEETTSCC---CEESSCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred CCCEEEEEecCCCCCCCceEEEEECCCCc---eeEeeccCCCccccceEECCCCCEEEEEec
Confidence 777565554332 468898875432 11111111 11244568889986 555544
No 244
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.97 E-value=0.0017 Score=55.47 Aligned_cols=173 Identities=12% Similarity=0.115 Sum_probs=93.6
Q ss_pred CC-cEEEEecCCeEEEEE--CCceEEEEe-------------eCCccccCeEECC-CCcEEE-EeCCCceEEEc-cCC-c
Q 023085 4 NG-VIYTATRDGWIKRLQ--DGTWVNWKF-------------IDSQTLVGLTSTK-EGHLII-CDNANGLHKVS-EDG-V 63 (287)
Q Consensus 4 ~G-~l~~~~~~g~i~~~~--~~~~~~~~~-------------~~~~~~~~i~~d~-dg~l~v-~~~~~gi~~~~-~~g-~ 63 (287)
+| .|..++.+|.|..|+ ++....... ....++..+++.+ ++++++ +...+.|..++ .++ .
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 134 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT 134 (408)
T ss_dssp TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc
Confidence 56 466677889999998 332211111 0112222778888 555444 44444577777 555 3
Q ss_pred EEEeeecCCccccccceEEEcC---CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeE-EeeccccccceE
Q 023085 64 ENFLSYVNGSKLRFANDVVEAS---DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT-LVADGFYFANGV 139 (287)
Q Consensus 64 ~~~~~~~~~~~~~~~~~l~~d~---~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~i 139 (287)
...... ...+..+.+.+ ++.++++ +...+.|..+|..+++.. .+.........+
T Consensus 135 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~ 192 (408)
T 4a11_B 135 ADVFNF-----EETVYSHHMSPVSTKHCLVAV-----------------GTRGPKVQLCDLKSGSCSHILQGHRQEILAV 192 (408)
T ss_dssp EEEEEC-----SSCEEEEEECSSCSSCCEEEE-----------------EESSSSEEEEESSSSCCCEEECCCCSCEEEE
T ss_pred ceeccC-----CCceeeeEeecCCCCCcEEEE-----------------EcCCCeEEEEeCCCcceeeeecCCCCcEEEE
Confidence 322221 12344555555 3345553 223467888887665533 233333455778
Q ss_pred EEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEe--------------ccCCCCCcceeeCCCCCEEEEEec
Q 023085 140 ALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFA--------------ENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 140 ~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~--------------~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
+++|+++.++++....+.|..|++...... ...+. ....+....+++.++|++.++...
T Consensus 193 ~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 265 (408)
T 4a11_B 193 SWSPRYDYILATASADSRVKLWDVRRASGC-LITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT 265 (408)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTCSSCC-SEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCCcEEEEEcCCCcEEEEECCCCCcc-cccccccccccceeeccccccccCceeEEEEcCCCCEEEEecC
Confidence 999999865555556678999997542100 01100 011123566888888875555543
No 245
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.95 E-value=0.0023 Score=53.91 Aligned_cols=169 Identities=10% Similarity=0.027 Sum_probs=93.6
Q ss_pred cEEEEecCCeEEEEE--CCceEEEEeeCCccccCeE-------ECCCCcEEEEeCCCceEEEc-cCC--cEEEeeecCCc
Q 023085 6 VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLT-------STKEGHLIICDNANGLHKVS-EDG--VENFLSYVNGS 73 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~-------~d~dg~l~v~~~~~gi~~~~-~~g--~~~~~~~~~~~ 73 (287)
.|..|+.+|.|..|+ +++....... .... .+. -..|+.+.+-+....+..++ .++ +..+...
T Consensus 50 ~l~sg~~Dg~v~iwd~~~~~~~~~~~~-~~v~-~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~---- 123 (343)
T 3lrv_A 50 VCMCRCEDGALHFTQLKDSKTITTITT-PNPR-TGGEHPAIISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVD---- 123 (343)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEEE-ECCC-TTCCCCSEEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECC----
T ss_pred EEEEECCCCcEEEEECCCCcEEEEEec-CCce-eeeeCCceEEecCCCeEEEEEccCceEEeecCCcceeEEeecC----
Confidence 456667899999998 4443322211 1111 222 23455544444444444455 333 2222111
Q ss_pred cccccceEEEcC--CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee--ccccccceEEEccCCCEEE
Q 023085 74 KLRFANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYFANGVALSRDEDYVV 149 (287)
Q Consensus 74 ~~~~~~~l~~d~--~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~l~ 149 (287)
....+..+++.+ ++.++++. ..++.|..+|..+++..... ........++++|+++.+.
T Consensus 124 ~~~~v~~~~~~~~~~~~~l~s~-----------------s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~la 186 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNTEYFIWA-----------------DNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLA 186 (343)
T ss_dssp CSSCEEEEECCC---CCEEEEE-----------------ETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEE
T ss_pred CCCCEEEEEcCCCCCCCEEEEE-----------------eCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEE
Confidence 113577888998 88877752 23567888888767654332 1222457789999998554
Q ss_pred EEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 150 VCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 150 v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
.+ ...+.|..||+...+.. ...+...-.+....+++.++|++.++...
T Consensus 187 sg-~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs~~g~~l~s~~~ 234 (343)
T 3lrv_A 187 LY-SPDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFADNGYWMVVECD 234 (343)
T ss_dssp EE-CTTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEECTTSSEEEEEES
T ss_pred EE-cCCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEeCCCCEEEEEeC
Confidence 44 45678999998643221 01222111234677889999976666554
No 246
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.94 E-value=0.005 Score=53.46 Aligned_cols=228 Identities=8% Similarity=0.042 Sum_probs=120.3
Q ss_pred CC-cEEEEecCCeEEEEE--C---Cc-e--EEEEeeCCccccCeEECCCCcEEEE-eCCCceEEEc-c---CC-cEEEee
Q 023085 4 NG-VIYTATRDGWIKRLQ--D---GT-W--VNWKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-E---DG-VENFLS 68 (287)
Q Consensus 4 ~G-~l~~~~~~g~i~~~~--~---~~-~--~~~~~~~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~-~---~g-~~~~~~ 68 (287)
+| .|..++.+|.|..|+ + +. . ........... .+++.++++++++ ...+.|..++ . ++ ......
T Consensus 75 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~ 153 (437)
T 3gre_A 75 ETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVT-QITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLN 153 (437)
T ss_dssp SSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEE-EEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEE
T ss_pred CCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEE-EEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccc
Confidence 55 466666889999998 3 32 1 11112223334 8899998875554 4333454444 2 33 222111
Q ss_pred ecC------Cc--cccccceEE--EcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-ec--cccc
Q 023085 69 YVN------GS--KLRFANDVV--EASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-AD--GFYF 135 (287)
Q Consensus 69 ~~~------~~--~~~~~~~l~--~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~--~~~~ 135 (287)
... .. ....+..+. ..+++.++++ +...+.|..+|..+++.... .. ....
T Consensus 154 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------------~~~d~~i~iwd~~~~~~~~~~~~~~h~~~ 216 (437)
T 3gre_A 154 CECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVA-----------------LTNLSRVIIFDIRTLERLQIIENSPRHGA 216 (437)
T ss_dssp EEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEE-----------------EETTSEEEEEETTTCCEEEEEECCGGGCC
T ss_pred cceeEEEEccCcccccCceEEEEEEcCCCCEEEE-----------------EeCCCeEEEEeCCCCeeeEEEccCCCCCc
Confidence 000 00 111223333 3355665554 23457888899876664433 22 2345
Q ss_pred cceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCccee----eCCCCCEEEEEeccchhHHHHhhcc
Q 023085 136 ANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNIN----LAPDGTFWIAIIKLDARRMKILNSS 211 (287)
Q Consensus 136 ~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~----~d~~G~lwv~~~~~~~~~~~~~~~~ 211 (287)
...++++|+++.|+.+. ..+.|..||+...+ ....+..........++ +.+++.+.++...
T Consensus 217 v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~------------ 281 (437)
T 3gre_A 217 VSSICIDEECCVLILGT-TRGIIDIWDIRFNV--LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSS------------ 281 (437)
T ss_dssp EEEEEECTTSCEEEEEE-TTSCEEEEETTTTE--EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEEST------------
T ss_pred eEEEEECCCCCEEEEEc-CCCeEEEEEcCCcc--EEEEEecCCCCceEEEEeccccCCCccEEEEEcC------------
Confidence 67889999998666665 45779999975321 11111101111233453 3345655544433
Q ss_pred hhHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCCc----------------------cccceEEEEEeC
Q 023085 212 KLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQ----------------------LMSFVTSGLQVD 268 (287)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~----------------------~~~~~~~~~~~~ 268 (287)
.+.|..++.+ ++.+..+...... ....+.++...+
T Consensus 282 ----------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~ 339 (437)
T 3gre_A 282 ----------------------KTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSN 339 (437)
T ss_dssp ----------------------TEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEET
T ss_pred ----------------------CCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECC
Confidence 3466777754 6666666532211 122356666667
Q ss_pred CEEEEEecCCCeEEEEeC
Q 023085 269 NHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 269 g~l~i~~~~~~~i~~~~~ 286 (287)
+++.+++-..+.|.++++
T Consensus 340 ~~~l~s~~~d~~i~~wd~ 357 (437)
T 3gre_A 340 DKILLTDEATSSIVMFSL 357 (437)
T ss_dssp TEEEEEEGGGTEEEEEET
T ss_pred ceEEEecCCCCeEEEEEC
Confidence 776666666778888876
No 247
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.94 E-value=0.0043 Score=54.09 Aligned_cols=193 Identities=5% Similarity=-0.048 Sum_probs=110.5
Q ss_pred CccccCeEECCC-CcEEEEeCC-CceEEEc-cC----------C--cEEEeeecCCccccccceEEEcCCCc-EEEEcCC
Q 023085 32 SQTLVGLTSTKE-GHLIICDNA-NGLHKVS-ED----------G--VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSS 95 (287)
Q Consensus 32 ~~~~~~i~~d~d-g~l~v~~~~-~gi~~~~-~~----------g--~~~~~~~~~~~~~~~~~~l~~d~~g~-l~v~~~~ 95 (287)
..+. .+++.++ ++++++... +.|..++ .. . ...+.. ....+.++++.+++. ++++.
T Consensus 129 ~~v~-~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~~~~~~~~l~s~-- 200 (430)
T 2xyi_A 129 GEVN-RARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRG-----HQKEGYGLSWNPNLNGYLLSA-- 200 (430)
T ss_dssp SCCS-EEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEEC-----CSSCCCCEEECTTSTTEEEEE--
T ss_pred CcEE-EEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecC-----CCCCeEEEEeCCCCCCeEEEE--
Confidence 3445 7888887 455554333 4477777 43 2 222211 123568899998876 66642
Q ss_pred CCCCCcceeeeeeccCCCceEEEEeCCCCee--------EEeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCC
Q 023085 96 SKYLPHEYCLDILEGKPHGQLLKYDPSSNIT--------TLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGER 167 (287)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~ 167 (287)
...+.|..++..++.. ..+.........++++|++..++++....+.|..|++....
T Consensus 201 ---------------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~ 265 (430)
T 2xyi_A 201 ---------------SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNN 265 (430)
T ss_dssp ---------------CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSC
T ss_pred ---------------eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 2346677777654211 11222234467788999555566666677899999986432
Q ss_pred Ccc-eeEEeccCCCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC--
Q 023085 168 KGK-LETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-- 243 (287)
Q Consensus 168 ~~~-~~~~~~~~~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 243 (287)
... ...+. .....+..+++.+++. ++++... .+.|..++.+
T Consensus 266 ~~~~~~~~~-~~~~~v~~i~~~p~~~~~l~tg~~----------------------------------dg~v~vwd~~~~ 310 (430)
T 2xyi_A 266 TSKPSHTVD-AHTAEVNCLSFNPYSEFILATGSA----------------------------------DKTVALWDLRNL 310 (430)
T ss_dssp SSSCSEEEE-CCSSCEEEEEECSSCTTEEEEEET----------------------------------TSEEEEEETTCT
T ss_pred CCcceeEee-cCCCCeEEEEeCCCCCCEEEEEeC----------------------------------CCeEEEEeCCCC
Confidence 111 11221 2223467889999885 5555443 2466666654
Q ss_pred CcEEEEEECCCCccccceEEEEEe-C-CEEEEEecCCCeEEEEeC
Q 023085 244 GTIIRNLVDPTGQLMSFVTSGLQV-D-NHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 244 g~~~~~~~~~~~~~~~~~~~~~~~-~-g~l~i~~~~~~~i~~~~~ 286 (287)
+..+..+.... ..+..+... + ..+++++...+.|.++++
T Consensus 311 ~~~~~~~~~h~----~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~ 351 (430)
T 2xyi_A 311 KLKLHSFESHK----DEIFQVQWSPHNETILASSGTDRRLHVWDL 351 (430)
T ss_dssp TSCSEEEECCS----SCEEEEEECSSCTTEEEEEETTSCCEEEEG
T ss_pred CCCeEEeecCC----CCEEEEEECCCCCCEEEEEeCCCcEEEEeC
Confidence 34455555322 246666664 3 356666666678888776
No 248
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.93 E-value=0.003 Score=57.95 Aligned_cols=106 Identities=15% Similarity=0.126 Sum_probs=67.6
Q ss_pred CeEECCCCc--EEEEeCCCceEEEc-cCC-c-EEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccC
Q 023085 37 GLTSTKEGH--LIICDNANGLHKVS-EDG-V-ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGK 111 (287)
Q Consensus 37 ~i~~d~dg~--l~v~~~~~gi~~~~-~~g-~-~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~ 111 (287)
.+++.|++. |..+...+.+..++ +.+ . ..+. + ....++++++.++|.++++. .
T Consensus 152 ~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~----~-H~~~V~~v~fspdg~~las~-----------------s 209 (611)
T 1nr0_A 152 SVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG----E-HTKFVHSVRYNPDGSLFAST-----------------G 209 (611)
T ss_dssp EEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC----C-CSSCEEEEEECTTSSEEEEE-----------------E
T ss_pred EEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec----c-ccCceEEEEECCCCCEEEEE-----------------E
Confidence 778889885 34444444566666 555 2 2221 1 22467899999999988752 2
Q ss_pred CCceEEEEeCCCCeeEEee--------ccccccceEEEccCCCEEEEEeCCCCEEEEEEecC
Q 023085 112 PHGQLLKYDPSSNITTLVA--------DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG 165 (287)
Q Consensus 112 ~~~~v~~~~~~~~~~~~~~--------~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~ 165 (287)
.++.|..++..+++..... ........++|+|+++.|..+. ..+.|..||+..
T Consensus 210 ~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s-~D~~v~lWd~~~ 270 (611)
T 1nr0_A 210 GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS-ADKTIKIWNVAT 270 (611)
T ss_dssp TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTT
T ss_pred CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEe-CCCeEEEEeCCC
Confidence 3567888887666543322 1233456789999998665554 567888998754
No 249
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.92 E-value=0.00036 Score=58.66 Aligned_cols=145 Identities=15% Similarity=0.115 Sum_probs=83.0
Q ss_pred CCC-cEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECC---CCcE-EEEeCCCceEEEc-cCC--cEEEeeecCC
Q 023085 3 KNG-VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTK---EGHL-IICDNANGLHKVS-EDG--VENFLSYVNG 72 (287)
Q Consensus 3 ~~G-~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~---dg~l-~v~~~~~gi~~~~-~~g--~~~~~~~~~~ 72 (287)
+++ .|..++.++.|..|+ .++............ .+.+.+ ++++ +++...+.|..++ +++ ...+......
T Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 256 (357)
T 3i2n_A 178 QEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVC-SLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEK 256 (357)
T ss_dssp -CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEE
T ss_pred CCCCEEEEEccCCeEEEEECccCceeeecCCCCceE-EEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccC
Confidence 456 455666889999999 444433333333444 888998 7764 4555445577777 444 3332211001
Q ss_pred ccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe--------------------eEEeec
Q 023085 73 SKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI--------------------TTLVAD 131 (287)
Q Consensus 73 ~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------------------~~~~~~ 131 (287)
.....+..+++.+++. ++++. ..++.|..++...+. +..+..
T Consensus 257 ~~~~~v~~~~~~~~~~~~l~~~-----------------~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 319 (357)
T 3i2n_A 257 AHKSTVWQVRHLPQNRELFLTA-----------------GGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL 319 (357)
T ss_dssp CCSSCEEEEEEETTEEEEEEEE-----------------ETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC
T ss_pred CCcCCEEEEEECCCCCcEEEEE-----------------eCCCcEEEeecCCCcccccccCCCCccccccccceeecccc
Confidence 1224677888999887 55542 223455555433211 111222
Q ss_pred cccccceEEEccCCCEEEEEeCCCCEEEEEEecC
Q 023085 132 GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG 165 (287)
Q Consensus 132 ~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~ 165 (287)
.......++++|+++.|.++....+.|..|++..
T Consensus 320 ~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 320 STQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred CCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 2334567899999997776666678899998753
No 250
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.91 E-value=0.0068 Score=50.34 Aligned_cols=225 Identities=12% Similarity=0.076 Sum_probs=116.4
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCceEEEEeeC-CccccCeEECCCCcEEE-EeCCCceEEEccCC-cEEEeeecCCccc
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTWVNWKFID-SQTLVGLTSTKEGHLII-CDNANGLHKVSEDG-VENFLSYVNGSKL 75 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~~~~~~~~-~~~~~~i~~d~dg~l~v-~~~~~gi~~~~~~g-~~~~~~~~~~~~~ 75 (287)
.++|. |..++.++.|..++ ........... .... .....+++++.+ +...+.+..++..+ ....... . ...
T Consensus 95 s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~-~-~~~ 171 (340)
T 4aow_A 95 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVL-SVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-E-SHS 171 (340)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS-S-SCS
T ss_pred CCCCCEEEEEcccccceEEeecccceeeeecCCCCcee-EEEEeecCccceeecCCCeEEEEEeCCCceEEEEe-c-ccc
Confidence 35564 55566778887777 22222222222 2223 456667775444 44334456666333 2221111 1 112
Q ss_pred cccceEEEcCCC--cEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee-ccccccceEEEccCCCEEEEEe
Q 023085 76 RFANDVVEASDG--SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCE 152 (287)
Q Consensus 76 ~~~~~l~~d~~g--~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~l~v~~ 152 (287)
..+..+++..++ .+.++. ...+.|..++..+++..... ........++++|+++.|+.+.
T Consensus 172 ~~v~~~~~~~~~~~~~~~s~-----------------~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s 234 (340)
T 4aow_A 172 EWVSCVRFSPNSSNPIIVSC-----------------GWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG 234 (340)
T ss_dssp SCEEEEEECSCSSSCEEEEE-----------------ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CcccceEEccCCCCcEEEEE-----------------cCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEe
Confidence 344555665543 444531 23456777887766654432 2334457789999998666554
Q ss_pred CCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCC
Q 023085 153 SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLG 232 (287)
Q Consensus 153 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
..+.|..||+... .....+. .......+++.+++.+..++..
T Consensus 235 -~Dg~i~iwd~~~~--~~~~~~~--~~~~v~~~~~~~~~~~~~~~~d--------------------------------- 276 (340)
T 4aow_A 235 -KDGQAMLWDLNEG--KHLYTLD--GGDIINALCFSPNRYWLCAATG--------------------------------- 276 (340)
T ss_dssp -TTCEEEEEETTTT--EEEEEEE--CSSCEEEEEECSSSSEEEEEET---------------------------------
T ss_pred -CCCeEEEEEeccC--ceeeeec--CCceEEeeecCCCCceeeccCC---------------------------------
Confidence 4678889987542 1112221 1223456777778777666654
Q ss_pred CceEEEEECCCCc-EEEEEECCC-----CccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 233 GGAHLIHVAEDGT-IIRNLVDPT-----GQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 233 ~~~~v~~~~~~g~-~~~~~~~~~-----~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
+.|..++.++. .+..+.... ......+.++... +++..+++-..+.|.++++
T Consensus 277 --~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~ 335 (340)
T 4aow_A 277 --PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 335 (340)
T ss_dssp --TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred --CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 35666665543 333332110 0112346677665 5555455445567777765
No 251
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.89 E-value=0.0016 Score=59.06 Aligned_cols=202 Identities=11% Similarity=0.048 Sum_probs=112.1
Q ss_pred CC-cEEEEeCC-CceEEEc-cCC-cEEEeeecCCccccccceEEEc--CCC-cEEEEcCCCCCCCcceeeeeeccCCCce
Q 023085 43 EG-HLIICDNA-NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEA--SDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQ 115 (287)
Q Consensus 43 dg-~l~v~~~~-~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d--~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 115 (287)
|| .|||++.. ..|.++| .+. ...+.....+ ..|.++++. +++ .+|++.....-...............+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g---~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNA---KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSC---CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCC---CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 77 48898765 4599998 554 3333222111 357788874 555 5777642210000000000000112356
Q ss_pred EEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCC--------------CEEEEEEecCC---------------
Q 023085 116 LLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK--------------FRCRKYWLKGE--------------- 166 (287)
Q Consensus 116 v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~--------------~~l~~~~~~~~--------------- 166 (287)
+-.+|.++.++..-......|.+++++|+|+++|+++... +.+..++....
T Consensus 177 vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 8889998877554322223789999999999999999665 23444442100
Q ss_pred -----CC--cce-eEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEE
Q 023085 167 -----RK--GKL-ETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLI 238 (287)
Q Consensus 167 -----~~--~~~-~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 238 (287)
.. .+. .... ..+..|.++.+++||+..+.+.... ..|.
T Consensus 257 ~VID~~~~~~~~~~~~I-pvg~~PhGv~~sPDGk~v~V~~~~s---------------------------------~~Vs 302 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYI-PIANNPHGCNMAPDKKHLCVAGKLS---------------------------------PTVT 302 (595)
T ss_dssp EEEECSGGGCCSSEEEE-EEESSCCCEEECTTSSEEEEECTTS---------------------------------SBEE
T ss_pred EEEeCcccCCceeEEEE-ecCCCceEEEEcCCCCEEEEeCCCC---------------------------------CeEE
Confidence 00 011 1111 1223589999999997555554421 2344
Q ss_pred EECCCC-------------cEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 239 HVAEDG-------------TIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 239 ~~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
.++.+. ...... +-|+ .+..+.++ +|++|++..-.+.|.++++
T Consensus 303 Vid~~~~~~~~~~~l~~~~~v~~~v--~vG~---gP~h~aF~~dG~aY~t~~ldsqV~kwdi 359 (595)
T 1fwx_A 303 VLDVTRFDAVFYENADPRSAVVAEP--ELGL---GPLHTAFDGRGNAYTSLFLDSQVVKWNI 359 (595)
T ss_dssp EEEGGGHHHHHHSCCCGGGGEEECC--BCCS---CEEEEEECTTSEEEEEETTTTEEEEEEH
T ss_pred EEECcccccccccccCcccceEEEc--CCCC---CcceEEECCCCeEEEEEecCCcEEEEEh
Confidence 443321 122222 2332 46777775 5799999999999999886
No 252
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.88 E-value=0.00019 Score=67.10 Aligned_cols=124 Identities=8% Similarity=-0.019 Sum_probs=76.4
Q ss_pred CCCcEEEEecCCeEEEEE--CCceEEEEeeCCc----cccCeEECCCCc-EEEEeC---------CCceEEEc-cCC-c-
Q 023085 3 KNGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQ----TLVGLTSTKEGH-LIICDN---------ANGLHKVS-EDG-V- 63 (287)
Q Consensus 3 ~~G~l~~~~~~g~i~~~~--~~~~~~~~~~~~~----~~~~i~~d~dg~-l~v~~~---------~~gi~~~~-~~g-~- 63 (287)
++|.+.+.+.++.|+.++ +++.......... .. .+++.|||+ |.++.. ...|+.++ .+| .
T Consensus 25 ~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~ 103 (719)
T 1z68_A 25 SGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNAS-NYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFV 103 (719)
T ss_dssp SSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCS-EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC
T ss_pred CCCeEEEEcCCCCEEEEEcCCCcEEEEEcccccccccee-eEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccc
Confidence 567666666788899999 5555554433221 34 788999997 444432 13577777 555 3
Q ss_pred --EEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccc--------
Q 023085 64 --ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-------- 133 (287)
Q Consensus 64 --~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-------- 133 (287)
..+. ..+..+++.+||+..+.. ..+.|+.++..+++...+....
T Consensus 104 ~~~~l~--------~~~~~~~~SPDG~~la~~------------------~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g 157 (719)
T 1z68_A 104 RGNELP--------RPIQYLCWSPVGSKLAYV------------------YQNNIYLKQRPGDPPFQITFNGRENKIFNG 157 (719)
T ss_dssp CSSCCC--------SSBCCEEECSSTTCEEEE------------------ETTEEEEESSTTSCCEECCCCCBTTTEEES
T ss_pred cceecC--------cccccceECCCCCEEEEE------------------ECCeEEEEeCCCCCcEEEecCCCcCCeEcc
Confidence 2221 245678899999643321 2357888887766655443211
Q ss_pred -----------cccceEEEccCCCEEEEEeC
Q 023085 134 -----------YFANGVALSRDEDYVVVCES 153 (287)
Q Consensus 134 -----------~~~~~i~~~~~~~~l~v~~~ 153 (287)
.....++|+|||+.|+++..
T Consensus 158 ~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~ 188 (719)
T 1z68_A 158 IPDWVYEEEMLATKYALWWSPNGKFLAYAEF 188 (719)
T ss_dssp SCCHHHHHHTTCSSCCEEECTTSSEEEEEEE
T ss_pred cccceeeeecccCcccEEECCCCCEEEEEEE
Confidence 11147899999998877653
No 253
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.85 E-value=0.0012 Score=64.69 Aligned_cols=134 Identities=9% Similarity=0.060 Sum_probs=81.1
Q ss_pred CeEEC-CCCc-EEEEeCCCceEEEc-cCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCC
Q 023085 37 GLTST-KEGH-LIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKP 112 (287)
Q Consensus 37 ~i~~d-~dg~-l~v~~~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ 112 (287)
.++++ |||+ |.++. ...++.++ .++ ...+... ....+..+++. +|..++.. ..
T Consensus 300 ~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~s-dg~~l~~~-----------------s~ 356 (1045)
T 1k32_A 300 AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEP----LRIRYVRRGGD-TKVAFIHG-----------------TR 356 (1045)
T ss_dssp EEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCC----SCEEEEEECSS-SEEEEEEE-----------------ET
T ss_pred eeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCC----CcceEEeeeEc-CCCeEEEE-----------------EC
Confidence 78889 9996 55444 45688887 555 4333111 11134566667 76533310 11
Q ss_pred CceEE-EEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCC
Q 023085 113 HGQLL-KYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDG 191 (287)
Q Consensus 113 ~~~v~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G 191 (287)
...++ .++..+++...+.........++++|||+.|+++.. .+.|+.+++++++ .........+....+++.+||
T Consensus 357 ~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~-~~~v~~~d~~tg~---~~~~~~~~~~~v~~~~~SpDG 432 (1045)
T 1k32_A 357 EGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVAND-RFEIMTVDLETGK---PTVIERSREAMITDFTISDNS 432 (1045)
T ss_dssp TEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEET-TSEEEEEETTTCC---EEEEEECSSSCCCCEEECTTS
T ss_pred CCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECC-CCeEEEEECCCCc---eEEeccCCCCCccceEECCCC
Confidence 45788 888876766555433345678899999998877764 5689999986432 222221222335778999999
Q ss_pred CEEEEE
Q 023085 192 TFWIAI 197 (287)
Q Consensus 192 ~lwv~~ 197 (287)
+..+..
T Consensus 433 ~~la~~ 438 (1045)
T 1k32_A 433 RFIAYG 438 (1045)
T ss_dssp CEEEEE
T ss_pred CeEEEE
Confidence 844443
No 254
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.84 E-value=8.4e-05 Score=64.02 Aligned_cols=137 Identities=15% Similarity=0.139 Sum_probs=59.5
Q ss_pred CCCcEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEE-eCCCceEEEc-cCC--cEEEeeecCCcccc
Q 023085 3 KNGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG--VENFLSYVNGSKLR 76 (287)
Q Consensus 3 ~~G~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~-~~g--~~~~~~~~~~~~~~ 76 (287)
.++.||+++.+|.|+.++ +|+....... .... ......+|+++++ .....|+.+| .+| +..+..........
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~-s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVL-QVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSC-CCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCce-ecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 367899999999999999 6766433333 3223 3333456777776 3345688898 577 33332110000001
Q ss_pred ccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCCC
Q 023085 77 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKF 156 (287)
Q Consensus 77 ~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~ 156 (287)
.| ++..++.+|++ ...+.|+.+|+++|+....... ......+|+++.+|+... .+
T Consensus 86 sp---~~~~~~~v~~g------------------~~dg~v~a~D~~tG~~~w~~~~---~~~~~~~p~~~~v~~~~~-dg 140 (369)
T 2hz6_A 86 SP---CRSSDGILYMG------------------KKQDIWYVIDLLTGEKQQTLSS---AFADSLSPSTSLLYLGRT-EY 140 (369)
T ss_dssp CS---CC-----CCCC------------------EEEEEEEEECCC-------------------------EEEEEE-EE
T ss_pred Cc---eEecCCEEEEE------------------eCCCEEEEEECCCCcEEEEecC---CCcccccccCCEEEEEec-CC
Confidence 11 12234566652 2346799999888876543221 112334566777888753 46
Q ss_pred EEEEEEecCC
Q 023085 157 RCRKYWLKGE 166 (287)
Q Consensus 157 ~l~~~~~~~~ 166 (287)
.|+.+|..++
T Consensus 141 ~v~a~d~~tG 150 (369)
T 2hz6_A 141 TITMYDTKTR 150 (369)
T ss_dssp EEECCCSSSS
T ss_pred EEEEEECCCC
Confidence 7888887644
No 255
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.84 E-value=0.0063 Score=52.12 Aligned_cols=168 Identities=14% Similarity=0.078 Sum_probs=99.4
Q ss_pred cEEEEecCCeEEEEE--CCceEEEEe-e-----CCccccCeEECC-CCcEEEEeCC-CceEEEc-c-CC--cEEEeeecC
Q 023085 6 VIYTATRDGWIKRLQ--DGTWVNWKF-I-----DSQTLVGLTSTK-EGHLIICDNA-NGLHKVS-E-DG--VENFLSYVN 71 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~~~~~~-~-----~~~~~~~i~~d~-dg~l~v~~~~-~gi~~~~-~-~g--~~~~~~~~~ 71 (287)
.|..++.++.|..|+ +++...... . ..... .+.+.+ +++++++... +.|..+| + .+ ...+..
T Consensus 172 ~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~--- 247 (380)
T 3iz6_a 172 RLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL-SLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG--- 247 (380)
T ss_dssp CEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE-EEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC---
T ss_pred EEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE-EEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECC---
Confidence 577888899999998 444332221 1 11123 556655 6666665433 4566677 4 33 333321
Q ss_pred CccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeecc--------ccccceEEEcc
Q 023085 72 GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--------FYFANGVALSR 143 (287)
Q Consensus 72 ~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--------~~~~~~i~~~~ 143 (287)
....++++++.++|..+++. ..++.|..+|..+++....... ......++|+|
T Consensus 248 --h~~~v~~v~~~p~~~~l~s~-----------------s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 308 (380)
T 3iz6_a 248 --HEGDINSVKFFPDGQRFGTG-----------------SDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSI 308 (380)
T ss_dssp --CSSCCCEEEECTTSSEEEEE-----------------CSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECS
T ss_pred --cCCCeEEEEEecCCCeEEEE-----------------cCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECC
Confidence 12467899999999887762 3356788888877764332211 12246789999
Q ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcceeEEe---ccCCCCCcceeeCCCCCEEEEEec
Q 023085 144 DEDYVVVCESWKFRCRKYWLKGERKGKLETFA---ENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 144 ~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
+++.++.+. ..+.|..||....+ ....+. ..-.+....+++.++|.+.++...
T Consensus 309 ~g~~l~~g~-~dg~i~vwd~~~~~--~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 309 SGRLLFAGY-SNGDCYVWDTLLAE--MVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW 364 (380)
T ss_dssp SSSEEEEEC-TTSCEEEEETTTCC--EEEEECCSCSSCCCCCCEEEECSSSSEEEEECT
T ss_pred CCCEEEEEE-CCCCEEEEECCCCc--eEEEEecccCCCCCceEEEEECCCCCEEEEeeC
Confidence 999666654 56789999864321 111111 111234677889999986665543
No 256
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.83 E-value=0.0073 Score=50.83 Aligned_cols=172 Identities=12% Similarity=0.142 Sum_probs=91.3
Q ss_pred CCCcEEEEecCCeEEEEEC-C-ceEEEEeeC---CccccCeEECCCCcEEEEeCCCceEEEccCC--cEEEeeecCCccc
Q 023085 3 KNGVIYTATRDGWIKRLQD-G-TWVNWKFID---SQTLVGLTSTKEGHLIICDNANGLHKVSEDG--VENFLSYVNGSKL 75 (287)
Q Consensus 3 ~~G~l~~~~~~g~i~~~~~-~-~~~~~~~~~---~~~~~~i~~d~dg~l~v~~~~~gi~~~~~~g--~~~~~~~~~~~~~ 75 (287)
.++.+|+....|.|++-.+ | .++...... ..+..++++++ +++|++....+|++-...| .+.+.... .. .
T Consensus 45 ~~~~~~~~G~~g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g~~g~i~~S~DgG~tW~~~~~~~-~~-~ 121 (327)
T 2xbg_A 45 DRHHGWLVGVNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVGEPPIMLHTTDGGQSWSQIPLDP-KL-P 121 (327)
T ss_dssp SSSCEEEEETTTEEEEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEEETTEEEEESSTTSSCEECCCCT-TC-S
T ss_pred CCCcEEEEcCCCeEEEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEECCCeEEEECCCCCCceECcccc-CC-C
Confidence 4567887767777877663 3 344433221 22332677775 7888876444466543434 55542211 11 1
Q ss_pred cccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccc-cccceEEEccCCCEEEEEeCC
Q 023085 76 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YFANGVALSRDEDYVVVCESW 154 (287)
Q Consensus 76 ~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~l~v~~~~ 154 (287)
..+..++...++++|++. ..+.|++-.-....+..+.... .....++++++++ +|+...
T Consensus 122 ~~~~~i~~~~~~~~~~~~------------------~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~-~~~~g~- 181 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMIT------------------NVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGE-YVAVSS- 181 (327)
T ss_dssp SCEEEEEEEETTEEEEEE------------------TTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSC-EEEEET-
T ss_pred CCeEEEEEECCCCEEEEe------------------CCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCc-EEEEEC-
Confidence 235667777778888852 2345776543323344443221 2335677888776 454443
Q ss_pred CCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 155 KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 155 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
.+.+++-+..+.. ...............++++++|++|++...
T Consensus 182 ~G~~~~S~d~gG~--tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 224 (327)
T 2xbg_A 182 RGSFYSTWEPGQT--AWEPHNRTTSRRLHNMGFTPDGRLWMIVNG 224 (327)
T ss_dssp TSSEEEEECTTCS--SCEEEECCSSSCEEEEEECTTSCEEEEETT
T ss_pred CCcEEEEeCCCCC--ceeECCCCCCCccceeEECCCCCEEEEeCC
Confidence 3456665422121 111111112223456778889999988865
No 257
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.83 E-value=0.00041 Score=61.53 Aligned_cols=108 Identities=18% Similarity=0.190 Sum_probs=66.1
Q ss_pred ccccceEEEcCCCc--EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe----eEEeecc---------ccccceE
Q 023085 75 LRFANDVVEASDGS--LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI----TTLVADG---------FYFANGV 139 (287)
Q Consensus 75 ~~~~~~l~~d~~g~--l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~~~~~---------~~~~~~i 139 (287)
+..|.+|++.++|+ +||++ ..+.|++++++... +..+... .....+|
T Consensus 13 L~~P~~~a~~pdG~~rl~V~e------------------r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgi 74 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILE------------------KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSL 74 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEE------------------TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEE
T ss_pred CCCceEEEECCCCCeEEEEEe------------------CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceee
Confidence 46889999999985 99973 34678888765221 1111111 1234568
Q ss_pred EEccC---CCEEEEEeCCC------------CEEEEEEecCC---C--CcceeEEeccC--C--CCCcceeeCCCCCEEE
Q 023085 140 ALSRD---EDYVVVCESWK------------FRCRKYWLKGE---R--KGKLETFAENL--P--GAPDNINLAPDGTFWI 195 (287)
Q Consensus 140 ~~~~~---~~~l~v~~~~~------------~~l~~~~~~~~---~--~~~~~~~~~~~--~--~~~~~i~~d~~G~lwv 195 (287)
+++|+ .+.||++.+.. .+|.+|.++.. . ....+.+.... . -....|++++||+|||
T Consensus 75 a~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv 154 (463)
T 2wg3_C 75 AFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYI 154 (463)
T ss_dssp EECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEE
T ss_pred EeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEE
Confidence 89986 45799886521 37888887532 1 12233332211 1 1234589999999999
Q ss_pred EEecc
Q 023085 196 AIIKL 200 (287)
Q Consensus 196 ~~~~~ 200 (287)
++...
T Consensus 155 ~~Gd~ 159 (463)
T 2wg3_C 155 ILGDG 159 (463)
T ss_dssp EECCT
T ss_pred EeCCC
Confidence 99764
No 258
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.82 E-value=0.019 Score=53.47 Aligned_cols=58 Identities=21% Similarity=0.248 Sum_probs=37.3
Q ss_pred CCcEEEEecCCeEEEEE--CCceEEEEeeC-C-----ccccCeEECCCCcEEEEeCC------CceEEEc-cCC
Q 023085 4 NGVIYTATRDGWIKRLQ--DGTWVNWKFID-S-----QTLVGLTSTKEGHLIICDNA------NGLHKVS-EDG 62 (287)
Q Consensus 4 ~G~l~~~~~~g~i~~~~--~~~~~~~~~~~-~-----~~~~~i~~d~dg~l~v~~~~------~gi~~~~-~~g 62 (287)
++.||+++.++.|+.+| +|+........ . .......+. ++.+|++... ..|+.+| .+|
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~~~~~~g~v~a~D~~tG 200 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAETG 200 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEE-CCEEEEEecccccCCCCEEEEEECCCC
Confidence 57899999999999999 67654333322 1 111022232 6788888642 3589999 778
No 259
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.82 E-value=0.01 Score=49.65 Aligned_cols=140 Identities=11% Similarity=0.118 Sum_probs=76.9
Q ss_pred cEEEEecCCeEEEEE--CCceEEEEee----CCccccCeEECCCCcEEEEeCC-CceEEEc-cCC------cEEEeeecC
Q 023085 6 VIYTATRDGWIKRLQ--DGTWVNWKFI----DSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG------VENFLSYVN 71 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~~~~~~~----~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~-~~g------~~~~~~~~~ 71 (287)
.|..++.++.|..|+ .+........ ...++..+++.|++++.++... +.|..++ ... ...+.. ..
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~-~~ 104 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAI-IE 104 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEE-EC
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEE-Ec
Confidence 455566788888888 3332222211 1223337889999986655433 4455555 221 111111 11
Q ss_pred CccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCC-CC---e-eEEeeccccccceEEEccCCC
Q 023085 72 GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SN---I-TTLVADGFYFANGVALSRDED 146 (287)
Q Consensus 72 ~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~---~-~~~~~~~~~~~~~i~~~~~~~ 146 (287)
+ ....+.++++.++|.++++. ..++.|..+|.. .+ + +..+.........++++|+++
T Consensus 105 ~-h~~~V~~v~~sp~g~~las~-----------------s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 166 (330)
T 2hes_X 105 G-HENEVKGVAWSNDGYYLATC-----------------SRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA 166 (330)
T ss_dssp -----CEEEEEECTTSCEEEEE-----------------ETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS
T ss_pred C-CCCcEEEEEECCCCCEEEEE-----------------eCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC
Confidence 1 12457889999999877752 234567777763 22 2 122233334567889999998
Q ss_pred EEEEEeCCCCEEEEEEecC
Q 023085 147 YVVVCESWKFRCRKYWLKG 165 (287)
Q Consensus 147 ~l~v~~~~~~~l~~~~~~~ 165 (287)
.|..+ +..+.|..|+...
T Consensus 167 ~l~s~-s~D~~i~iW~~~~ 184 (330)
T 2hes_X 167 LLASS-SYDDTVRIWKDYD 184 (330)
T ss_dssp EEEEE-ETTSCEEEEEEET
T ss_pred EEEEE-cCCCeEEEEECCC
Confidence 55554 4567788887653
No 260
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.79 E-value=0.021 Score=52.19 Aligned_cols=41 Identities=12% Similarity=0.090 Sum_probs=28.2
Q ss_pred eEEEEECC-CCcEEEEEECCCCccccceEEEEEeCCEEEEEecC
Q 023085 235 AHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLT 277 (287)
Q Consensus 235 ~~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~ 277 (287)
+.+..+|. .|+.++.+..+.+. ...+... ..+|++||+...
T Consensus 507 g~l~A~D~~tG~~lW~~~~~~g~-~a~P~~y-~~~G~qYv~~~~ 548 (582)
T 1flg_A 507 GYFKAFDAKSGKELWKFQTGSGI-VSPPITW-EQDGEQYLGVTV 548 (582)
T ss_dssp SEEEEEETTTCCEEEEEECSSCC-CSCCEEE-EETTEEEEEEEE
T ss_pred CcEEEEECCCCCEEEEecCCCCc-ccCceEE-EECCEEEEEEEc
Confidence 68889996 49999999876553 2222222 368999998553
No 261
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.76 E-value=8.2e-05 Score=66.76 Aligned_cols=75 Identities=19% Similarity=0.176 Sum_probs=55.4
Q ss_pred cccccceEEEcCCCcEEE-EcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeecc--ccccceEEEccCCCEEEE
Q 023085 74 KLRFANDVVEASDGSLYF-TVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FYFANGVALSRDEDYVVV 150 (287)
Q Consensus 74 ~~~~~~~l~~d~~g~l~v-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~l~v 150 (287)
.+.+|++|+++++|+||| +|... +... .........|+++++.+++++.+... ...++|++|+||+++|||
T Consensus 474 ~fnsPDnL~fd~~G~LWf~TD~~~--~~~g----~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV 547 (592)
T 4a9v_A 474 MFNSPDGLGFDKAGRLWILTDGDS--SNAG----DFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp CCCCEEEEEECTTCCEEEEECCCC--CCSG----GGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred ccCCCCceEECCCCCEEEEeCCCc--Cccc----cccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEE
Confidence 478899999999999999 66542 1100 00122345899999988998887642 457899999999999999
Q ss_pred EeCC
Q 023085 151 CESW 154 (287)
Q Consensus 151 ~~~~ 154 (287)
+-..
T Consensus 548 ~vQH 551 (592)
T 4a9v_A 548 GIQH 551 (592)
T ss_dssp EEES
T ss_pred EEeC
Confidence 8643
No 262
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.76 E-value=0.0016 Score=60.80 Aligned_cols=86 Identities=8% Similarity=-0.006 Sum_probs=48.1
Q ss_pred CCCCc-EEEEec---------CCeEEEEE--CCce---EEEEeeCCccccCeEECCCCcEEEEeCCCceEEEc-cCC-cE
Q 023085 2 DKNGV-IYTATR---------DGWIKRLQ--DGTW---VNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VE 64 (287)
Q Consensus 2 d~~G~-l~~~~~---------~g~i~~~~--~~~~---~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g-~~ 64 (287)
.+||. |.+++. ++.|+.++ +++. ..+ ..... .+++.|||+..+......|++.+ .+| ..
T Consensus 68 SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~-~~~~SPDG~~la~~~~~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 68 SPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQ-YLCWSPVGSKLAYVYQNNIYLKQRPGDPPF 143 (719)
T ss_dssp CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBC-CEEECSSTTCEEEEETTEEEEESSTTSCCE
T ss_pred CCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---Ccccc-cceECCCCCEEEEEECCeEEEEeCCCCCcE
Confidence 46775 555554 46788888 4443 222 12234 78999999643333355788888 566 54
Q ss_pred EEeeec-CC-----cc--------ccccceEEEcCCCcEEE
Q 023085 65 NFLSYV-NG-----SK--------LRFANDVVEASDGSLYF 91 (287)
Q Consensus 65 ~~~~~~-~~-----~~--------~~~~~~l~~d~~g~l~v 91 (287)
.+.... .. .+ +....+++..+||+..+
T Consensus 144 ~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la 184 (719)
T 1z68_A 144 QITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLA 184 (719)
T ss_dssp ECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEE
T ss_pred EEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEE
Confidence 443211 00 00 01224789999997444
No 263
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.76 E-value=0.012 Score=49.54 Aligned_cols=168 Identities=7% Similarity=0.042 Sum_probs=90.4
Q ss_pred CcEEEEecCCeEEEEEC-C-ceEEEEee---CCccccCeEECCCCcEEEEeCCCceEEEccCC--cEEEeeecCCccccc
Q 023085 5 GVIYTATRDGWIKRLQD-G-TWVNWKFI---DSQTLVGLTSTKEGHLIICDNANGLHKVSEDG--VENFLSYVNGSKLRF 77 (287)
Q Consensus 5 G~l~~~~~~g~i~~~~~-~-~~~~~~~~---~~~~~~~i~~d~dg~l~v~~~~~gi~~~~~~g--~~~~~~~~~~~~~~~ 77 (287)
+.+|++...|.|++-.+ | .++..... +..+. .++..+++++|++....+|++-...| .+.+... ....
T Consensus 90 ~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~----~~~~ 164 (327)
T 2xbg_A 90 NEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPR-LIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQE----AIGV 164 (327)
T ss_dssp TEEEEEEETTEEEEESSTTSSCEECCCCTTCSSCEE-EEEEEETTEEEEEETTCCEEEESSTTSSEEEEECS----CCCC
T ss_pred CeEEEEECCCeEEEECCCCCCceECccccCCCCCeE-EEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecC----CCcc
Confidence 56787777777877653 3 34443322 12344 67777788999887555566654445 5554321 1134
Q ss_pred cceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCC-CCeeEEeecc-ccccceEEEccCCCEEEEEeCCC
Q 023085 78 ANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SNITTLVADG-FYFANGVALSRDEDYVVVCESWK 155 (287)
Q Consensus 78 ~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~-~~~~~~i~~~~~~~~l~v~~~~~ 155 (287)
+.++++++++.+|+.. ..+.+++-... ...+..+... ......++++++++ +|+... .
T Consensus 165 ~~~~~~~~~~~~~~~g------------------~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~-~~~~~~-~ 224 (327)
T 2xbg_A 165 MRNLNRSPSGEYVAVS------------------SRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR-LWMIVN-G 224 (327)
T ss_dssp EEEEEECTTSCEEEEE------------------TTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSC-EEEEET-T
T ss_pred eEEEEEcCCCcEEEEE------------------CCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCC-EEEEeC-C
Confidence 5678888888888742 23457766432 1233333221 12345677788876 676654 3
Q ss_pred CEEEEEEecCCCCcceeEEecc-CCC--CCcceeeCCCCCEEEEEec
Q 023085 156 FRCRKYWLKGERKGKLETFAEN-LPG--APDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~~~~~-~~~--~~~~i~~d~~G~lwv~~~~ 199 (287)
+.+++...++.+ ........ .+. ....+++++++.+|++...
T Consensus 225 G~~~~s~~D~G~--tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 225 GKIAFSDPDNSE--NWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA 269 (327)
T ss_dssp TEEEEEETTEEE--EECCCBCTTSSCCSCEEEEEESSSSCEEEEEST
T ss_pred ceEEEecCCCCC--eeEeccCCcccCCcceEEEEecCCCEEEEEeCC
Confidence 455554322111 11111101 011 1234667778899998765
No 264
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.74 E-value=0.019 Score=50.25 Aligned_cols=142 Identities=13% Similarity=0.135 Sum_probs=76.4
Q ss_pred CCCcEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEEC--CCCcEE-EEeCCCceEEEc-cCC--cEEEeee-----
Q 023085 3 KNGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTST--KEGHLI-ICDNANGLHKVS-EDG--VENFLSY----- 69 (287)
Q Consensus 3 ~~G~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d--~dg~l~-v~~~~~gi~~~~-~~g--~~~~~~~----- 69 (287)
+++.|..++.+|.|..|+ +++..........+...+.+. +++++. .+...+.|..++ +++ .......
T Consensus 172 ~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~ 251 (464)
T 3v7d_B 172 HGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPL 251 (464)
T ss_dssp STTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSE
T ss_pred CCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcce
Confidence 456777788899999999 454333322222222255555 566544 444444566666 444 2111000
Q ss_pred --------------cCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-ecccc
Q 023085 70 --------------VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFY 134 (287)
Q Consensus 70 --------------~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~ 134 (287)
..+ ....+.. +.+++.+.++ +..++.|..+|..+++.... .....
T Consensus 252 ~~~~~~~~~~~~~~~~~-~~~~v~~--~~~~~~~l~~-----------------~~~d~~i~vwd~~~~~~~~~~~~~~~ 311 (464)
T 3v7d_B 252 VFHTPEENPYFVGVLRG-HMASVRT--VSGHGNIVVS-----------------GSYDNTLIVWDVAQMKCLYILSGHTD 311 (464)
T ss_dssp EESCGGGCTTEEEEECC-CSSCEEE--EEEETTEEEE-----------------EETTSCEEEEETTTTEEEEEECCCSS
T ss_pred EeeccCCCeEEEEEccC-ccceEEE--EcCCCCEEEE-----------------EeCCCeEEEEECCCCcEEEEecCCCC
Confidence 000 0011222 2344554443 23356788888876664433 23334
Q ss_pred ccceEEEccCCCEEEEEeCCCCEEEEEEecC
Q 023085 135 FANGVALSRDEDYVVVCESWKFRCRKYWLKG 165 (287)
Q Consensus 135 ~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~ 165 (287)
....++++|+++.++.+. ..+.|..|++..
T Consensus 312 ~v~~~~~~~~~~~l~sg~-~dg~i~vwd~~~ 341 (464)
T 3v7d_B 312 RIYSTIYDHERKRCISAS-MDTTIRIWDLEN 341 (464)
T ss_dssp CEEEEEEETTTTEEEEEE-TTSCEEEEETTT
T ss_pred CEEEEEEcCCCCEEEEEe-CCCcEEEEECCC
Confidence 556788999999766665 457799999754
No 265
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.70 E-value=0.017 Score=48.57 Aligned_cols=169 Identities=12% Similarity=0.116 Sum_probs=93.6
Q ss_pred CCc-EEEEecCCeEEEEE-C-Cc----e-EEEEe--eCCccccCeEECCCCcEEEEeCC-CceEEEc-cCC--cEEEeee
Q 023085 4 NGV-IYTATRDGWIKRLQ-D-GT----W-VNWKF--IDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VENFLSY 69 (287)
Q Consensus 4 ~G~-l~~~~~~g~i~~~~-~-~~----~-~~~~~--~~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~-~~g--~~~~~~~ 69 (287)
+|. |..++.++.|..|+ . ++ . ..... ....++..+++.+++.+.++... +.|..++ +++ ...+...
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h 117 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH 117 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 554 56666888888888 2 21 1 11111 11122327888999987665433 4466677 666 3343211
Q ss_pred cCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee---ccccccceEEEccCC-
Q 023085 70 VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA---DGFYFANGVALSRDE- 145 (287)
Q Consensus 70 ~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~- 145 (287)
...+.++++.++|...++. ..++.|..+|.......... ........++++|++
T Consensus 118 -----~~~v~~v~~sp~~~~l~s~-----------------~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 175 (343)
T 2xzm_R 118 -----QSEVYSVAFSPDNRQILSA-----------------GAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMK 175 (343)
T ss_dssp -----CSCEEEEEECSSTTEEEEE-----------------ETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCC
T ss_pred -----CCcEEEEEECCCCCEEEEE-----------------cCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccc
Confidence 2357889999999877752 23456777776533322222 112234566777765
Q ss_pred ---------CEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 146 ---------DYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 146 ---------~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
. ++++....+.|..|+... .....+. .-......+++.++|++.++...
T Consensus 176 ~~~~~~~~~~-~l~s~~~d~~i~iwd~~~---~~~~~~~-~h~~~v~~~~~s~~g~~l~sgs~ 233 (343)
T 2xzm_R 176 SANKVQPFAP-YFASVGWDGRLKVWNTNF---QIRYTFK-AHESNVNHLSISPNGKYIATGGK 233 (343)
T ss_dssp SCSCCCSSCC-EEEEEETTSEEEEEETTT---EEEEEEE-CCSSCEEEEEECTTSSEEEEEET
T ss_pred cccccCCCCC-EEEEEcCCCEEEEEcCCC---ceeEEEc-CccccceEEEECCCCCEEEEEcC
Confidence 4 344444567888888322 1111222 12234567888999976665543
No 266
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.70 E-value=0.027 Score=52.29 Aligned_cols=42 Identities=12% Similarity=0.231 Sum_probs=28.9
Q ss_pred eEEEEECCC-CcEEEEEECCCCccccceEEEEEeCCEEEEEecCC
Q 023085 235 AHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTS 278 (287)
Q Consensus 235 ~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~ 278 (287)
+.|..+|.+ |+.++.+..+.+. ...+... ..+|++|++...+
T Consensus 479 g~l~a~d~~tG~~l~~~~~~~~~-~~~p~~~-~~~G~~yva~~~G 521 (668)
T 1kv9_A 479 GQMHAYSADKGEALWQFEAQSGI-VAAPMTF-ELAGRQYVAIMAG 521 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSSCC-CSCCEEE-EETTEEEEEEEEC
T ss_pred ccchhhhhhcChhheEecCCCCc-ccCceEE-EECCEEEEEEEec
Confidence 588899865 8999999876442 2223322 4689999887654
No 267
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.69 E-value=0.035 Score=51.76 Aligned_cols=42 Identities=24% Similarity=0.317 Sum_probs=29.2
Q ss_pred eEEEEECCC-CcEEEEEECCCCccccceEEEEEeCCEEEEEecCC
Q 023085 235 AHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTS 278 (287)
Q Consensus 235 ~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~ 278 (287)
+.+..+|.+ |+.++.+..+.+. ...+... ..+|+.||+...+
T Consensus 496 g~l~a~D~~tG~~lw~~~~~~~~-~~~p~ty-~~~G~qyv~~~~G 538 (689)
T 1yiq_A 496 GRVIAYAADTGEKLWEQPAASGV-MAAPVTY-SVDGEQYVTFMAG 538 (689)
T ss_dssp SEEEEEETTTCCEEEEEECSSCC-CSCCEEE-EETTEEEEEEEEC
T ss_pred CcEEEEECCCCccceeeeCCCCc-ccCceEE-EECCEEEEEEEec
Confidence 688999965 9999999876553 2233333 4689999886643
No 268
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.67 E-value=0.018 Score=48.12 Aligned_cols=137 Identities=11% Similarity=0.021 Sum_probs=76.8
Q ss_pred CCCC-cEEEEecC---C--eEEEEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeCC--------------------
Q 023085 2 DKNG-VIYTATRD---G--WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA-------------------- 52 (287)
Q Consensus 2 d~~G-~l~~~~~~---g--~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~-------------------- 52 (287)
.+|| .|.+.... + .|+.++ .++......... .. .+++.|||+ |+++...
T Consensus 67 SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~-~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~ 144 (347)
T 2gop_A 67 SPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IR-SLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDL 144 (347)
T ss_dssp CTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EE-EEEECTTSSEEEEEEECCCC---------CCCC----
T ss_pred CCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-cc-ceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCc
Confidence 4577 45555532 2 377777 455554444333 44 788899996 5555311
Q ss_pred -------CceEEEc-cCC-c-EEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCC-CceEEEEeC
Q 023085 53 -------NGLHKVS-EDG-V-ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKP-HGQLLKYDP 121 (287)
Q Consensus 53 -------~gi~~~~-~~g-~-~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~ 121 (287)
..|++++ .++ . +.+.. + .+..+++.++| ++++....... .... ...|+.++
T Consensus 145 ~~~~~~~~~l~~~d~~~~~~~~~l~~-----~--~~~~~~~spdg-~~~~~~~~~~~---------~~~~~~~~l~~~d- 206 (347)
T 2gop_A 145 GFFDGEKTTFWIFDTESEEVIEEFEK-----P--RFSSGIWHRDK-IVVNVPHREII---------PQYFKFWDIYIWE- 206 (347)
T ss_dssp -----CEEEEEEEETTTTEEEEEEEE-----E--TTCEEEEETTE-EEEEEECCCSS---------CCSSCCEEEEEEE-
T ss_pred ccccCccceEEEEECCCCeEEeeecC-----C--CcccccCCCCe-EEEEEeccccc---------ccccccccEEEeC-
Confidence 3478888 566 5 55532 1 45677888899 66642110000 0001 34789898
Q ss_pred CCCeeEEeeccccccceEEEccCCCEEEEEeCC-------CCEEEEEE
Q 023085 122 SSNITTLVADGFYFANGVALSRDEDYVVVCESW-------KFRCRKYW 162 (287)
Q Consensus 122 ~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~-------~~~l~~~~ 162 (287)
+++...+... .... .++|+|+.+++.... ...|+.++
T Consensus 207 -~~~~~~l~~~-~~~~--~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 207 -DGKEEKMFEK-VSFY--AVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp -TTEEEEEEEE-ESEE--EEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred -CCceEEeccC-ccee--eECCCCCEEEEEEccccCCccccceEEEEC
Confidence 4776655443 2112 238999877766533 24788887
No 269
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.67 E-value=0.018 Score=48.05 Aligned_cols=134 Identities=11% Similarity=0.012 Sum_probs=76.7
Q ss_pred cEEEEecCCeEEEEE--C-CceE-E-EEeeCCccccCeEECCCCcEEEE-eCCCceEEEc-cCC-cEEEeeecCCccccc
Q 023085 6 VIYTATRDGWIKRLQ--D-GTWV-N-WKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG-VENFLSYVNGSKLRF 77 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~-~~~~-~-~~~~~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~-~~g-~~~~~~~~~~~~~~~ 77 (287)
.|..++.+|.|..|+ + +... . +........ .+++.+++++.++ ...+.|..++ .++ ...+... ...
T Consensus 56 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-----~~~ 129 (368)
T 3mmy_A 56 FLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL-DVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQH-----DAP 129 (368)
T ss_dssp EEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-----SSC
T ss_pred EEEEECCCCcEEEEEcCCCCceeEEEeccccCCEE-EEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccc-----cCc
Confidence 566777889999998 3 4432 2 222233334 8899999975554 4444577777 666 4333221 235
Q ss_pred cceEEE--cCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCC
Q 023085 78 ANDVVE--ASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK 155 (287)
Q Consensus 78 ~~~l~~--d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~ 155 (287)
+.++.+ .+++.++++. ..++.|..+|..+++......... ...+++.....++++.. .
T Consensus 130 v~~~~~~~~~~~~~l~~~-----------------~~dg~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~ 189 (368)
T 3mmy_A 130 VKTIHWIKAPNYSCVMTG-----------------SWDKTLKFWDTRSSNPMMVLQLPE--RCYCADVIYPMAVVATA-E 189 (368)
T ss_dssp EEEEEEEECSSCEEEEEE-----------------ETTSEEEEECSSCSSCSEEEECSS--CEEEEEEETTEEEEEEG-G
T ss_pred eEEEEEEeCCCCCEEEEc-----------------cCCCcEEEEECCCCcEEEEEecCC--CceEEEecCCeeEEEeC-C
Confidence 677887 7888766642 235678888876655322221111 22233333444555554 4
Q ss_pred CEEEEEEecC
Q 023085 156 FRCRKYWLKG 165 (287)
Q Consensus 156 ~~l~~~~~~~ 165 (287)
+.+..|+...
T Consensus 190 ~~i~~~~~~~ 199 (368)
T 3mmy_A 190 RGLIVYQLEN 199 (368)
T ss_dssp GCEEEEECSS
T ss_pred CcEEEEEecc
Confidence 5678888653
No 270
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.64 E-value=0.019 Score=47.37 Aligned_cols=110 Identities=9% Similarity=-0.072 Sum_probs=64.4
Q ss_pred CeEECCCCcEEEEeCC-CceEEEc-cCC--c-EEEeeecCCccccccceEEEcC--CCcEEEEcCCCCCCCcceeeeeec
Q 023085 37 GLTSTKEGHLIICDNA-NGLHKVS-EDG--V-ENFLSYVNGSKLRFANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILE 109 (287)
Q Consensus 37 ~i~~d~dg~l~v~~~~-~gi~~~~-~~g--~-~~~~~~~~~~~~~~~~~l~~d~--~g~l~v~~~~~~~~~~~~~~~~~~ 109 (287)
.+++.+++++.++... +.|..++ .++ . +...... + ....+.++++.+ ++.++++.
T Consensus 16 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~d~~~l~s~---------------- 77 (351)
T 3f3f_A 16 DVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWR-A-HDSSIVAIDWASPEYGRIIASA---------------- 77 (351)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEE-C-CSSCEEEEEECCGGGCSEEEEE----------------
T ss_pred EEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceec-c-CCCcEEEEEEcCCCCCCEEEEE----------------
Confidence 7889999975555333 3466666 433 2 2322111 1 124577888887 57766642
Q ss_pred cCCCceEEEEeCCCCe----------eEEeeccccccceEEEccC--CCEEEEEeCCCCEEEEEEecCC
Q 023085 110 GKPHGQLLKYDPSSNI----------TTLVADGFYFANGVALSRD--EDYVVVCESWKFRCRKYWLKGE 166 (287)
Q Consensus 110 ~~~~~~v~~~~~~~~~----------~~~~~~~~~~~~~i~~~~~--~~~l~v~~~~~~~l~~~~~~~~ 166 (287)
..++.|..+|..+++ +..+.........++++|+ ++.++.+. ..+.|..||+...
T Consensus 78 -~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~dg~v~iwd~~~~ 144 (351)
T 3f3f_A 78 -SYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLG-NDGILRLYDALEP 144 (351)
T ss_dssp -ETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-TTCEEEEEECSST
T ss_pred -cCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEec-CCCcEEEecCCCh
Confidence 224556666655432 2222333345677889998 87666655 4678999997643
No 271
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.62 E-value=0.0067 Score=58.41 Aligned_cols=171 Identities=13% Similarity=0.078 Sum_probs=99.6
Q ss_pred CCCCc-EEEEecCCeEEEEE-CCceEEEEeeCCccccCeEECCCCc-EEEEeCCCceEEEc-cCC--cEEEeeecCCccc
Q 023085 2 DKNGV-IYTATRDGWIKRLQ-DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVS-EDG--VENFLSYVNGSKL 75 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~-~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~~gi~~~~-~~g--~~~~~~~~~~~~~ 75 (287)
+++|. |..|+.+|.|..|+ .+...........++..+++.+ |+ |..+...+.|...+ .++ +..+. . .
T Consensus 26 spdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~-----~ 98 (902)
T 2oaj_A 26 DFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-V-----P 98 (902)
T ss_dssp ETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-C-----S
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-C-----C
Confidence 56774 55677889999998 3322222222223333788888 77 44445445677777 566 44442 1 1
Q ss_pred cccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee------------ccccccceEEEcc
Q 023085 76 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA------------DGFYFANGVALSR 143 (287)
Q Consensus 76 ~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------------~~~~~~~~i~~~~ 143 (287)
..+..+++++++...++ +..++.|..+|.++++...+. ........++|+|
T Consensus 99 ~~V~~v~~sp~g~~l~s-----------------gs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 99 GKITSIDTDASLDWMLI-----------------GLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp SCEEEEECCTTCSEEEE-----------------EETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred CCEEEEEECCCCCEEEE-----------------EcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEcc
Confidence 35788999999986664 234567888888766653211 1123456789999
Q ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcceeEEecc-C----------------CCCCcceeeCCCCCEEEEEec
Q 023085 144 DEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN-L----------------PGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 144 ~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~-~----------------~~~~~~i~~d~~G~lwv~~~~ 199 (287)
++..+.++....+.+ .||+...+ ....+... . ......+++.++|++.++...
T Consensus 162 ~~~~~l~~g~~dg~v-lWd~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~ 231 (902)
T 2oaj_A 162 RDIGTVLISYEYVTL-TYSLVENE--IKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE 231 (902)
T ss_dssp TEEEEEEEECSSCEE-EEETTTTE--EEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET
T ss_pred CCCCEEEEEeCCCcE-EEECCCCc--eEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC
Confidence 653344455556778 88875431 11122111 0 023456888899986666654
No 272
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.62 E-value=0.022 Score=47.62 Aligned_cols=143 Identities=10% Similarity=0.032 Sum_probs=74.6
Q ss_pred CeEECCCCcEEEEeCCCceEEEc-cCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCc
Q 023085 37 GLTSTKEGHLIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHG 114 (287)
Q Consensus 37 ~i~~d~dg~l~v~~~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~ 114 (287)
.+.++++ .|..+...+.|..++ ..+ .........+.....+.++++.+++.+.++. ..++
T Consensus 19 ~~~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~-----------------s~D~ 80 (330)
T 2hes_X 19 SFDFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAG-----------------SFDS 80 (330)
T ss_dssp EEEEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEE-----------------ETTS
T ss_pred eeccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEE-----------------eCCC
Confidence 5666666 344444334466666 444 3332221112123467889999999877752 2244
Q ss_pred eEEEEeCCCC-------ee-EEeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCC-CCcce-eEEeccCCCCCcc
Q 023085 115 QLLKYDPSSN-------IT-TLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGE-RKGKL-ETFAENLPGAPDN 184 (287)
Q Consensus 115 ~v~~~~~~~~-------~~-~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~-~~~~~-~~~~~~~~~~~~~ 184 (287)
.|..++.... +. ..+.........++|+|+++.|..+. ..+.|..|++... ...+. ..+. .-......
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s-~D~~v~iwd~~~~~~~~~~~~~~~-~h~~~v~~ 158 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCS-RDKSVWIWETDESGEEYECISVLQ-EHSQDVKH 158 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEE-TTSCEEEEECCTTCCCCEEEEEEC-CCSSCEEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEe-CCCEEEEEeccCCCCCeEEEEEec-cCCCceEE
Confidence 5666654311 11 11222233456789999998665554 4677889987421 11111 1221 11223566
Q ss_pred eeeCCCCCEEEEEec
Q 023085 185 INLAPDGTFWIAIIK 199 (287)
Q Consensus 185 i~~d~~G~lwv~~~~ 199 (287)
+++.+++++.++...
T Consensus 159 v~~~p~~~~l~s~s~ 173 (330)
T 2hes_X 159 VIWHPSEALLASSSY 173 (330)
T ss_dssp EEECSSSSEEEEEET
T ss_pred EEECCCCCEEEEEcC
Confidence 788888876665543
No 273
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.57 E-value=0.028 Score=52.78 Aligned_cols=180 Identities=12% Similarity=0.071 Sum_probs=88.3
Q ss_pred CCCCc-EEEEe-cCC----eEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCCC--------------ceEEEc
Q 023085 2 DKNGV-IYTAT-RDG----WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNAN--------------GLHKVS 59 (287)
Q Consensus 2 d~~G~-l~~~~-~~g----~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~--------------gi~~~~ 59 (287)
.+||. |.++. .+| .|+.++ +|+............ +++..+|..|+++.... .|++.+
T Consensus 171 SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~-~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~ 249 (741)
T 1yr2_A 171 SDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFS-GLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHR 249 (741)
T ss_dssp CTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESC-CCEESTTSEEEEEECCCC--------CCCCCEEEEEE
T ss_pred CCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceec-cEEEECCCEEEEEEecCcccccccccCCCCCEEEEEE
Confidence 35664 43443 323 477777 555533221111113 77888884466664322 266766
Q ss_pred -cCC-c-EEEeeecCCccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCC--e-eEEeecc
Q 023085 60 -EDG-V-ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN--I-TTLVADG 132 (287)
Q Consensus 60 -~~g-~-~~~~~~~~~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~-~~~~~~~ 132 (287)
.++ . ..+....... .....++.++++|. |.++... .......|+.+|..++ + +..+...
T Consensus 250 lgt~~~~~~lv~~~~~~-~~~~~~~~~SpDG~~l~~~~~~-------------~~~~~~~l~~~d~~~~~~~~~~~l~~~ 315 (741)
T 1yr2_A 250 LGTPQSADQPVFATPEL-PKRGHGASVSSDGRWVVITSSE-------------GTDPVNTVHVARVTNGKIGPVTALIPD 315 (741)
T ss_dssp TTSCGGGCEEEECCTTC-TTCEEEEEECTTSCEEEEEEEC-------------TTCSCCEEEEEEEETTEECCCEEEECS
T ss_pred CCCCchhCEEEeccCCC-CeEEEEEEECCCCCEEEEEEEc-------------cCCCcceEEEEECCCCCCcccEEecCC
Confidence 444 2 2222211111 11345778899996 4432111 0012347888887655 4 4544433
Q ss_pred ccccceEEEccCCCEEEEEeCC---CCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 133 FYFANGVALSRDEDYVVVCESW---KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 133 ~~~~~~i~~~~~~~~l~v~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
....... ++++++.||+.... ..+|+++++++.. .....+.........++.++ ++.|+++...
T Consensus 316 ~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~ 382 (741)
T 1yr2_A 316 LKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKDNLESVGIA-GNRLFASYIH 382 (741)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSSEEEEEEEE-BTEEEEEEEE
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCCeEEEEEEE-CCEEEEEEEE
Confidence 2222222 35888888877642 3579999976532 23333332222223345555 4556665543
No 274
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.55 E-value=0.01 Score=55.30 Aligned_cols=168 Identities=10% Similarity=0.091 Sum_probs=84.4
Q ss_pred CeEEEEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeCCCc-------------eEEEc-cCC-c-EEEeeecCCcc
Q 023085 14 GWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANG-------------LHKVS-EDG-V-ENFLSYVNGSK 74 (287)
Q Consensus 14 g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~~g-------------i~~~~-~~g-~-~~~~~~~~~~~ 74 (287)
..|+.++ +++.............+++..+||+ |+.+..... |++.+ .++ . ..+.......
T Consensus 147 ~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~- 225 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD- 225 (695)
T ss_dssp CEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC-
T ss_pred EEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC-
Confidence 3577777 4443201111111112788999996 444443222 88887 444 2 2222211111
Q ss_pred ccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeC
Q 023085 75 LRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCES 153 (287)
Q Consensus 75 ~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~ 153 (287)
.....++.++++|. |.++... ......|+.++..++++..+...........+ ++++ +|+...
T Consensus 226 ~~~~~~~~~SpDG~~l~~~~~~--------------~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~ 289 (695)
T 2bkl_A 226 PTTFLQSDLSRDGKYLFVYILR--------------GWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTD 289 (695)
T ss_dssp TTCEEEEEECTTSCCEEEEEEE--------------TTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEEC
T ss_pred CEEEEEEEECCCCCEEEEEEeC--------------CCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEEC
Confidence 12445778899986 4442110 10234688887665666555443332233333 7787 777654
Q ss_pred ---CCCEEEEEEecCCCCcceeEEeccC-CCCCcceeeCCCCCEEEEEec
Q 023085 154 ---WKFRCRKYWLKGERKGKLETFAENL-PGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 154 ---~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~d~~G~lwv~~~~ 199 (287)
...+|++++++++.......+.... .....++++. ++.++++...
T Consensus 290 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~ 338 (695)
T 2bkl_A 290 EGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLK 338 (695)
T ss_dssp TTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEE
T ss_pred CCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEE
Confidence 2468999987654322223333221 1123445565 5666666543
No 275
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.55 E-value=0.033 Score=50.45 Aligned_cols=138 Identities=7% Similarity=0.002 Sum_probs=78.5
Q ss_pred CeEECCCCc-EEEEeCCCceEEEccCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCc
Q 023085 37 GLTSTKEGH-LIICDNANGLHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHG 114 (287)
Q Consensus 37 ~i~~d~dg~-l~v~~~~~gi~~~~~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~ 114 (287)
++++.|||. |-+++..+.+..++..+ +..+. .....+...+.++++.++|.+.++ +..++
T Consensus 90 ~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAs-----------------gs~DG 151 (588)
T 2j04_A 90 VCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVV-----------------GNEDG 151 (588)
T ss_dssp EEEECSSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEE-----------------EETTS
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEE-----------------EcCCC
Confidence 778899996 55555444566665555 33332 111111235789999999986664 23457
Q ss_pred eEEEEeCCCCee--------EEee----ccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcc-eeEEeccCCCC
Q 023085 115 QLLKYDPSSNIT--------TLVA----DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGK-LETFAENLPGA 181 (287)
Q Consensus 115 ~v~~~~~~~~~~--------~~~~----~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~ 181 (287)
.|..++..++.. ..+. ........++|+|++ + ++...++.+..+++++....+ ...+...-...
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--L-aass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~ 228 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--L-VAALSNNSVFSMTVSASSHQPVSRMIQNASRRK 228 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--E-EEEETTCCEEEECCCSSSSCCCEEEEECCCSSC
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--E-EEEeCCCeEEEEECCCCccccceeeecccccCc
Confidence 788888776632 3321 122456788999998 3 444456789999987644221 11221111123
Q ss_pred CcceeeCCCCCEEEEE
Q 023085 182 PDNINLAPDGTFWIAI 197 (287)
Q Consensus 182 ~~~i~~d~~G~lwv~~ 197 (287)
...+++. |+.-+++
T Consensus 229 V~svaFs--g~~LASa 242 (588)
T 2j04_A 229 ITDLKIV--DYKVVLT 242 (588)
T ss_dssp CCCEEEE--TTEEEEE
T ss_pred EEEEEEE--CCEEEEE
Confidence 5667776 4443333
No 276
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.54 E-value=0.026 Score=52.67 Aligned_cols=129 Identities=12% Similarity=-0.015 Sum_probs=70.8
Q ss_pred eEEEc-cCC-cEEEeeecC---CccccccceEEEcCCCcEEE-E-cCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeE
Q 023085 55 LHKVS-EDG-VENFLSYVN---GSKLRFANDVVEASDGSLYF-T-VSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT 127 (287)
Q Consensus 55 i~~~~-~~g-~~~~~~~~~---~~~~~~~~~l~~d~~g~l~v-~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 127 (287)
+++.+ .++ .+.+..... +. .....++++.+||+..+ + +.. +.....|+.+|..+++..
T Consensus 100 l~~~~~~~~~~~~lld~~~l~~~~-~~~~~~~~~SPDg~~la~~~~~~--------------G~~~~~i~v~d~~tg~~~ 164 (710)
T 2xdw_A 100 LYVQDSLEGEARVFLDPNILSDDG-TVALRGYAFSEDGEYFAYGLSAS--------------GSDWVTIKFMKVDGAKEL 164 (710)
T ss_dssp EEEESSTTSCCEEEECGGGGCTTS-CEEEEEEEECTTSSEEEEEEEET--------------TCSCEEEEEEETTTTEEE
T ss_pred EEEEcCCCCCcEEEECHHHhccCC-CEEEEEEEECCCCCEEEEEEcCC--------------CCceEEEEEEECCCCCCC
Confidence 57776 445 555533211 11 11356788999997443 2 111 111237999999888865
Q ss_pred EeeccccccceEEEccCCCEEEEEeCCC---------------CEEEEEEecCCCCcceeEEecc-CCCCCcceeeCCCC
Q 023085 128 LVADGFYFANGVALSRDEDYVVVCESWK---------------FRCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDG 191 (287)
Q Consensus 128 ~~~~~~~~~~~i~~~~~~~~l~v~~~~~---------------~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~d~~G 191 (287)
..........+++|+|||+.|+++.... ..|+++++.+++......+... .+....++.+.+||
T Consensus 165 ~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg 244 (710)
T 2xdw_A 165 PDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDG 244 (710)
T ss_dssp EEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS
T ss_pred cccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCC
Confidence 4322222246789999999888876432 2488888764322112222211 11223467788898
Q ss_pred C-EEEEEe
Q 023085 192 T-FWIAII 198 (287)
Q Consensus 192 ~-lwv~~~ 198 (287)
+ |.++..
T Consensus 245 ~~l~~~~~ 252 (710)
T 2xdw_A 245 RYVLLSIR 252 (710)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEE
Confidence 6 444443
No 277
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.52 E-value=0.012 Score=46.42 Aligned_cols=134 Identities=11% Similarity=0.041 Sum_probs=77.9
Q ss_pred CeEECCCCcEEEEeCCCceEEEc-cCC--------cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeee
Q 023085 37 GLTSTKEGHLIICDNANGLHKVS-EDG--------VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDI 107 (287)
Q Consensus 37 ~i~~d~dg~l~v~~~~~gi~~~~-~~g--------~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~ 107 (287)
.++++|+|.||+. ....+++++ +++ .+.+-.. + ...-.++.+|++|.||+.
T Consensus 45 ~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~--G--w~~F~a~~fD~~G~LYav--------------- 104 (236)
T 1tl2_A 45 FLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNG--G--WNQFQFLFFDPNGYLYAV--------------- 104 (236)
T ss_dssp EEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECS--C--GGGCSEEEECTTSCEEEE---------------
T ss_pred eEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEeccc--c--cccceEEEECCCCCEEEe---------------
Confidence 7999999999999 345699998 452 1222110 1 122467999999999995
Q ss_pred eccCCCceEEEEeCCCC-eeEEe-------eccccccceEEEccCCCEEEEEeCCCCEEEEEEec-CCC---CcceeEEe
Q 023085 108 LEGKPHGQLLKYDPSSN-ITTLV-------ADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLK-GER---KGKLETFA 175 (287)
Q Consensus 108 ~~~~~~~~v~~~~~~~~-~~~~~-------~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~-~~~---~~~~~~~~ 175 (287)
.++.|+|+++.+. .-..+ ...-.....+.++|+|. ||... ++++++-... +.. ......+.
T Consensus 105 ----~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g 177 (236)
T 1tl2_A 105 ----SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFYKALPPVSNQDNWLARATKIG 177 (236)
T ss_dssp ----ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEEEECCCSSTTCCHHHHCEEEE
T ss_pred ----CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEEecCCCCCCCcccccccceec
Confidence 2478999987432 11111 01112336678899996 88887 4567663322 110 00111111
Q ss_pred ccCCCCCcceeeCCCCCEEEEE
Q 023085 176 ENLPGAPDNINLAPDGTFWIAI 197 (287)
Q Consensus 176 ~~~~~~~~~i~~d~~G~lwv~~ 197 (287)
...-..-.-+.++++|+||..+
T Consensus 178 ~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 178 QGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp SSSGGGEEEEEECTTSCEEEEE
T ss_pred cCCcceEEEEEECCCCcEEEEe
Confidence 0000011236688999999998
No 278
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.49 E-value=0.018 Score=54.21 Aligned_cols=132 Identities=12% Similarity=0.051 Sum_probs=73.3
Q ss_pred CeEECCCCcEE-EEeCCCceEEEc-cCC-cEEEeeecCCccccccceEEEcCC--CcEEEEcCCCCCCCcceeeeeeccC
Q 023085 37 GLTSTKEGHLI-ICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGK 111 (287)
Q Consensus 37 ~i~~d~dg~l~-v~~~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~--g~l~v~~~~~~~~~~~~~~~~~~~~ 111 (287)
.+++.++|++. .+...+.|..++ .++ ........ + ....+.++++.++ +.+.++. .
T Consensus 14 ~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~-~-h~~~V~~l~~s~~~~~~~l~s~-----------------s 74 (753)
T 3jro_A 14 DAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-G-HEGPVWRVDWAHPKFGTILASC-----------------S 74 (753)
T ss_dssp EECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC-C-CSSCEEEEEECCTTSCSEEEEE-----------------E
T ss_pred EEEECCCCCeEEEEECCCcEEEEecCCCCCccceecc-C-CcCceEEEEecCCCCCCEEEEE-----------------e
Confidence 67788888644 444444466666 433 22222111 1 1245778888766 7776652 2
Q ss_pred CCceEEEEeCCCCeeE---EeeccccccceEEEccC--CCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCccee
Q 023085 112 PHGQLLKYDPSSNITT---LVADGFYFANGVALSRD--EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNIN 186 (287)
Q Consensus 112 ~~~~v~~~~~~~~~~~---~~~~~~~~~~~i~~~~~--~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 186 (287)
.++.|..+|..+++.. ...........++++|+ ++.++.+. ..+.|..|++..........+. ........++
T Consensus 75 ~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs-~dg~I~vwdl~~~~~~~~~~~~-~~~~~v~~l~ 152 (753)
T 3jro_A 75 YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS-SDGKVSVVEFKENGTTSPIIID-AHAIGVNSAS 152 (753)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-TTSEEEEEECCSSSCCCCEEEE-CCSSCEEEEE
T ss_pred CCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEe-CCCcEEEEEeecCCCcceeEee-cCCCceEEEE
Confidence 3456776776656422 22233345677889998 87665554 5678999998653222121221 1222345566
Q ss_pred eCC
Q 023085 187 LAP 189 (287)
Q Consensus 187 ~d~ 189 (287)
+.+
T Consensus 153 ~~p 155 (753)
T 3jro_A 153 WAP 155 (753)
T ss_dssp ECC
T ss_pred ecC
Confidence 666
No 279
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.39 E-value=0.06 Score=50.12 Aligned_cols=143 Identities=7% Similarity=-0.034 Sum_probs=71.2
Q ss_pred eEEEEE--CCceEEEEeeCCccccCeEECCCCc-EEEEeCCC-------------ceEEEc-cCC-c--EEEeeecCCcc
Q 023085 15 WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNAN-------------GLHKVS-EDG-V--ENFLSYVNGSK 74 (287)
Q Consensus 15 ~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~-l~v~~~~~-------------gi~~~~-~~g-~--~~~~~~~~~~~ 74 (287)
.|+.++ +|+............ +++.. ||+ |+++.... .|++.+ .++ . ..+... ....
T Consensus 156 ~i~v~dl~tg~~~~~~~~~~k~~-~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~-~~~~ 232 (693)
T 3iuj_A 156 EIHLMDVESKQPLETPLKDVKFS-GISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGA-IPAQ 232 (693)
T ss_dssp EEEEEETTTCSEEEEEEEEEESC-CCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESC-SGGG
T ss_pred EEEEEECCCCCCCccccCCceec-cEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEec-CCCC
Confidence 456666 555433222111112 66777 774 66664331 266666 333 1 233221 1100
Q ss_pred ccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCC--eeEEeeccccccceEEEccCCCEEEEE
Q 023085 75 LRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN--ITTLVADGFYFANGVALSRDEDYVVVC 151 (287)
Q Consensus 75 ~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~l~v~ 151 (287)
.....++.++++|. |+++... ......|+.++.+++ ++..+......... .++++++.+|+.
T Consensus 233 ~~~~~~~~~SpDg~~l~~~~~~--------------~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~l~~~ 297 (693)
T 3iuj_A 233 HHRYVGATVTEDDRFLLISAAN--------------STSGNRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGSTLYLL 297 (693)
T ss_dssp CCSEEEEEECTTSCEEEEEEES--------------SSSCCEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTEEEEE
T ss_pred CeEEEEEEEcCCCCEEEEEEcc--------------CCCCcEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCEEEEE
Confidence 11234677888886 4443211 112347888887544 45544433222122 256777777776
Q ss_pred eCC---CCEEEEEEecCCCCcceeEEe
Q 023085 152 ESW---KFRCRKYWLKGERKGKLETFA 175 (287)
Q Consensus 152 ~~~---~~~l~~~~~~~~~~~~~~~~~ 175 (287)
... ..+|++++++++.....+.+.
T Consensus 298 t~~~~~~~~l~~~d~~~~~~~~~~~l~ 324 (693)
T 3iuj_A 298 TNRDAPNRRLVTVDAANPGPAHWRDLI 324 (693)
T ss_dssp ECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred ECCCCCCCEEEEEeCCCCCccccEEEe
Confidence 543 368999998754333334443
No 280
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.39 E-value=0.058 Score=46.91 Aligned_cols=215 Identities=13% Similarity=0.094 Sum_probs=105.6
Q ss_pred cEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCC-cEEEEeCCCceEEEc-cCC--cEEEeeecCCccccccc
Q 023085 6 VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEG-HLIICDNANGLHKVS-EDG--VENFLSYVNGSKLRFAN 79 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg-~l~v~~~~~gi~~~~-~~g--~~~~~~~~~~~~~~~~~ 79 (287)
.|..++.+|.|..|+ +++..........+...+.+ ++ .+..+...+.|..++ .++ ...+.. ....+.
T Consensus 211 ~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~ 283 (445)
T 2ovr_B 211 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQG-----HTNRVY 283 (445)
T ss_dssp EEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECC-----CSSCEE
T ss_pred EEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecC-----CCCceE
Confidence 455666777777777 34332222221222214444 44 455555444566666 455 333211 112345
Q ss_pred eEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee-ccccccceEEEccCCCEEEEEeCCCCEE
Q 023085 80 DVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCESWKFRC 158 (287)
Q Consensus 80 ~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~l~v~~~~~~~l 158 (287)
++.+ ++...++ +..++.|..+|..+++..... ........+ .++++.++.+. ..+.|
T Consensus 284 ~~~~--~~~~l~~-----------------~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~-~dg~i 341 (445)
T 2ovr_B 284 SLQF--DGIHVVS-----------------GSLDTSIRVWDVETGNCIHTLTGHQSLTSGM--ELKDNILVSGN-ADSTV 341 (445)
T ss_dssp EEEE--CSSEEEE-----------------EETTSCEEEEETTTCCEEEEECCCCSCEEEE--EEETTEEEEEE-TTSCE
T ss_pred EEEE--CCCEEEE-----------------EeCCCeEEEEECCCCCEEEEEcCCcccEEEE--EEeCCEEEEEe-CCCeE
Confidence 5555 4444443 223567888887766543322 222222333 44566555554 56789
Q ss_pred EEEEecCCCCcceeEEecc--CCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceE
Q 023085 159 RKYWLKGERKGKLETFAEN--LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAH 236 (287)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
..|++...+ ....+... .......++++ +++.++... .+.
T Consensus 342 ~vwd~~~~~--~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~----------------------------------dg~ 383 (445)
T 2ovr_B 342 KIWDIKTGQ--CLQTLQGPNKHQSAVTCLQFN--KNFVITSSD----------------------------------DGT 383 (445)
T ss_dssp EEEETTTCC--EEEEECSTTSCSSCEEEEEEC--SSEEEEEET----------------------------------TSE
T ss_pred EEEECCCCc--EEEEEccCCCCCCCEEEEEEC--CCEEEEEeC----------------------------------CCe
Confidence 999975422 12222210 11224456664 444444443 257
Q ss_pred EEEECC-CCcEEEEEECC-CCccccceEEEEEeC-CEE-EEEecCCC---eEEEEeCC
Q 023085 237 LIHVAE-DGTIIRNLVDP-TGQLMSFVTSGLQVD-NHL-YVISLTSN---FIGKVQLS 287 (287)
Q Consensus 237 v~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~-g~l-~i~~~~~~---~i~~~~~~ 287 (287)
|..++. .++.+..+... .+.....+..+.... +.+ .+++..+. .|.++|++
T Consensus 384 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 384 VKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp EEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred EEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECC
Confidence 777775 47777766321 122234567777764 443 33333332 48888874
No 281
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.38 E-value=0.0088 Score=56.14 Aligned_cols=125 Identities=6% Similarity=-0.046 Sum_probs=70.3
Q ss_pred CCCcEEEEecCCeEEEEE--CCceEEEEeeCC-ccc----cCeEECCCCc-EEEEeCC---------CceEEEc-cCC-c
Q 023085 3 KNGVIYTATRDGWIKRLQ--DGTWVNWKFIDS-QTL----VGLTSTKEGH-LIICDNA---------NGLHKVS-EDG-V 63 (287)
Q Consensus 3 ~~G~l~~~~~~g~i~~~~--~~~~~~~~~~~~-~~~----~~i~~d~dg~-l~v~~~~---------~gi~~~~-~~g-~ 63 (287)
+||.+.+.+ ++.|..++ +++......... ... .++++.|||+ |.++... ..++.++ .+| .
T Consensus 26 ~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~ 104 (740)
T 4a5s_A 26 SDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL 104 (740)
T ss_dssp SSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred CCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcE
Confidence 566555444 88999999 555444432211 111 0267799997 4444321 2356777 566 4
Q ss_pred EEEeeecCCccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccc---------
Q 023085 64 ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF--------- 133 (287)
Q Consensus 64 ~~~~~~~~~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--------- 133 (287)
..+... .......++.+||. |.++ ..+.|+.++..+++...+....
T Consensus 105 ~~l~~~-----~~~~~~~~~SPdG~~la~~-------------------~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~ 160 (740)
T 4a5s_A 105 ITEERI-----PNNTQWVTWSPVGHKLAYV-------------------WNNDIYVKIEPNLPSYRITWTGKEDIIYNGI 160 (740)
T ss_dssp CCSSCC-----CTTEEEEEECSSTTCEEEE-------------------ETTEEEEESSTTSCCEECCSCCBTTTEEESB
T ss_pred EEcccC-----CCcceeeEECCCCCEEEEE-------------------ECCeEEEEECCCCceEEEcCCCCccceecCc
Confidence 443211 12356678888886 3332 2356888877666655443211
Q ss_pred ----------cccceEEEccCCCEEEEEe
Q 023085 134 ----------YFANGVALSRDEDYVVVCE 152 (287)
Q Consensus 134 ----------~~~~~i~~~~~~~~l~v~~ 152 (287)
....+++|+|||+.|....
T Consensus 161 ~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 161 TDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp CCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred ccccccchhcCCCcceEECCCCCEEEEEE
Confidence 1123578999999777654
No 282
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.33 E-value=0.047 Score=50.88 Aligned_cols=111 Identities=14% Similarity=0.169 Sum_probs=61.8
Q ss_pred CCcEEEEecCCeEEEEE--CCceEEEEeeCCc-----------cccCeEECCCCcEEEEeCCCceEEEc-cCC--cEEEe
Q 023085 4 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQ-----------TLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFL 67 (287)
Q Consensus 4 ~G~l~~~~~~g~i~~~~--~~~~~~~~~~~~~-----------~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g--~~~~~ 67 (287)
+|.||+++.++.|+.+| +|+.......... ...+++++ +++||+++....|+.+| .+| +-...
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~v~v~~~dg~l~AlDa~TG~~~W~~~ 148 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW-KGKVYVGVLDGRLEAIDAKTGQRAWSVD 148 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEE-CCEEEEEccCCEEEEEECCCCCEeeeec
Confidence 67899999888999999 6765433322111 01134443 67999998666799999 788 22222
Q ss_pred eecCCcccccc-ceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE
Q 023085 68 SYVNGSKLRFA-NDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL 128 (287)
Q Consensus 68 ~~~~~~~~~~~-~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 128 (287)
..........+ ....+ .++.+++.....++ ...+.|+.+|.++|+...
T Consensus 149 ~~~~~~~~~~~~~sP~v-~~g~v~vg~~~~~~------------~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 149 TRADHKRSYTITGAPRV-VNGKVVIGNGGAEF------------GVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp CCSCTTSCCBCCSCCEE-ETTEEEECCBCTTT------------CCBCEEEEEETTTCCEEE
T ss_pred CcCCCCCCccccCCcEE-ECCEEEEEeCCCcc------------CCCCEEEEEECCCCcEEE
Confidence 11010000000 01112 25788885332111 124678888888787544
No 283
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.33 E-value=0.027 Score=47.78 Aligned_cols=135 Identities=11% Similarity=0.009 Sum_probs=75.7
Q ss_pred CCeEEEEE--CCceEEEEeeCCccccCeEECC-CCc-EEEEeCC------CceEEEc-cCC-cEEEeeecCCccccccce
Q 023085 13 DGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTK-EGH-LIICDNA------NGLHKVS-EDG-VENFLSYVNGSKLRFAND 80 (287)
Q Consensus 13 ~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~-dg~-l~v~~~~------~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~ 80 (287)
...|+.++ +++............ .+.+.+ +|+ |+++... ..|+.++ ..+ ...+.. ..+...+..
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~~~~~-~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~---~~~~~~~~~ 242 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDTAWLG-HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE---HAEGESCTH 242 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEESSCEE-EEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC---CCTTEEEEE
T ss_pred cceEEEEECCCCcEEeeccCCcccc-cceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec---cCCCccccc
Confidence 34677787 555555544333334 677888 675 5554322 2588888 444 444422 111124566
Q ss_pred EEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEcc-CCCEEEEEeC-----
Q 023085 81 VVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSR-DEDYVVVCES----- 153 (287)
Q Consensus 81 l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~l~v~~~----- 153 (287)
+++.++|. |+++... .+.....|+.+|..+++...+.... ... +.++| +++.++.+..
T Consensus 243 ~~~spdg~~l~~~~~~-------------~~~~~~~l~~~d~~~g~~~~l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~ 307 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYF-------------KGQTDRVIYKANPETLENEEVMVMP-PCS-HLMSNFDGSLMVGDGCDAPVD 307 (396)
T ss_dssp EEECTTSSCEEEEEEE-------------TTTCCEEEEEECTTTCCEEEEEECC-SEE-EEEECSSSSEEEEEECCC---
T ss_pred eEECCCCCEEEEEecC-------------CCCccceEEEEECCCCCeEEeeeCC-CCC-CCccCCCCceEEEecCCccee
Confidence 78899986 4443100 0111245999998877765543211 112 77889 9996655431
Q ss_pred ----------CCCEEEEEEecCC
Q 023085 154 ----------WKFRCRKYWLKGE 166 (287)
Q Consensus 154 ----------~~~~l~~~~~~~~ 166 (287)
....|+.+++++.
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp -------CCCCCCEEEEEETTTT
T ss_pred eccccccccCCCCcEEEEecccC
Confidence 2367999987654
No 284
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.31 E-value=0.011 Score=51.91 Aligned_cols=102 Identities=9% Similarity=-0.058 Sum_probs=58.7
Q ss_pred ccceEEEcCCCcEEE----EcCCCCCCCcceeeeeeccCCCceEEEEeCCCC-----e-------eEEeeccccccceEE
Q 023085 77 FANDVVEASDGSLYF----TVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-----I-------TTLVADGFYFANGVA 140 (287)
Q Consensus 77 ~~~~l~~d~~g~l~v----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~-------~~~~~~~~~~~~~i~ 140 (287)
.+.+++++++|...+ +. ...+.|..+|..++ + +..+.........++
T Consensus 94 ~v~~l~~spdg~~lav~~~sg-----------------s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 156 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSS-----------------EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMK 156 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEET-----------------TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEE
T ss_pred cccEEEEcCCCCEEEEEEecc-----------------CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEE
Confidence 478899999987655 31 23456666765322 0 111112234567889
Q ss_pred EccC-CCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 141 LSRD-EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 141 ~~~~-~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
|+|+ ++ ++++.+..+.|..||+.... ...... .....+..+++.++|+..++...
T Consensus 157 ~~p~~~~-~las~s~Dg~v~iwD~~~~~--~~~~~~-~~~~~v~~v~wspdg~~lasgs~ 212 (434)
T 2oit_A 157 WNPTVPS-MVAVCLADGSIAVLQVTETV--KVCATL-PSTVAVTSVCWSPKGKQLAVGKQ 212 (434)
T ss_dssp ECSSCTT-EEEEEETTSCEEEEEESSSE--EEEEEE-CGGGCEEEEEECTTSSCEEEEET
T ss_pred ECCCCCC-EEEEEECCCeEEEEEcCCCc--ceeecc-CCCCceeEEEEcCCCCEEEEEcC
Confidence 9998 55 55555567789999986431 111111 11224677889999865544443
No 285
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.27 E-value=0.0056 Score=48.24 Aligned_cols=91 Identities=15% Similarity=0.082 Sum_probs=55.2
Q ss_pred CCCCCcEEEEecCCeEEEEE--CCce-------EEEEeeCCccccCeEECCCCcEEEEeCCCceEEEc-cC-CcEEEee-
Q 023085 1 MDKNGVIYTATRDGWIKRLQ--DGTW-------VNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-ED-GVENFLS- 68 (287)
Q Consensus 1 ~d~~G~l~~~~~~g~i~~~~--~~~~-------~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~-g~~~~~~- 68 (287)
++++|.||.. .+|.|++.+ +... +++-...-.-...+.+|++|.||+.+. ..|++++ ++ +-..+..
T Consensus 48 f~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav~d-G~iyr~~pP~~~~~~Wl~~ 125 (236)
T 1tl2_A 48 LSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVSK-DKLYKASPPQSDTDNWIAR 125 (236)
T ss_dssp ECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEEET-TEEEEESCCCSTTCCHHHH
T ss_pred ECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEeCC-CEEEEeCCCcCCCCceecc
Confidence 4678999998 788899988 3111 122111111123688999999999953 5688998 43 2111100
Q ss_pred --ecCCccccccceEEEcCCCcEEEEc
Q 023085 69 --YVNGSKLRFANDVVEASDGSLYFTV 93 (287)
Q Consensus 69 --~~~~~~~~~~~~l~~d~~g~l~v~~ 93 (287)
......-.....|.++++|.||...
T Consensus 126 a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 126 ATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp SEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred ccEeccCCCCceEEEEECCCceEEEEe
Confidence 0001112345789999999999953
No 286
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.26 E-value=0.06 Score=44.47 Aligned_cols=170 Identities=14% Similarity=0.126 Sum_probs=87.0
Q ss_pred Cc-EEEEecCCeEEEEE--CCce---EEEEe---eCCccccCeEECCCCcEEEEeCCCc-eEEEc-cCC-cEEEeeecCC
Q 023085 5 GV-IYTATRDGWIKRLQ--DGTW---VNWKF---IDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG-VENFLSYVNG 72 (287)
Q Consensus 5 G~-l~~~~~~g~i~~~~--~~~~---~~~~~---~~~~~~~~i~~d~dg~l~v~~~~~g-i~~~~-~~g-~~~~~~~~~~ 72 (287)
+. |..++.++.|..|+ .++. ..... ...... .+.+.++|++.++....+ +...+ ..+ ........
T Consensus 51 ~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~-~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~-- 127 (340)
T 4aow_A 51 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVS-DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGH-- 127 (340)
T ss_dssp TTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC--
T ss_pred CCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEE-EEEECCCCCEEEEEcccccceEEeecccceeeeecCC--
Confidence 44 45566888888888 2221 11111 122334 788999998666543444 55555 333 22221111
Q ss_pred ccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee--ccccccceEEEccCCC-EEE
Q 023085 73 SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYFANGVALSRDED-YVV 149 (287)
Q Consensus 73 ~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~-~l~ 149 (287)
...+......+++..+++. ..++.+..++.......... ........+++++++. .++
T Consensus 128 --~~~~~~~~~~~~~~~l~s~-----------------s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 188 (340)
T 4aow_A 128 --TKDVLSVAFSSDNRQIVSG-----------------SRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII 188 (340)
T ss_dssp --SSCEEEEEECTTSSCEEEE-----------------ETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEE
T ss_pred --CCceeEEEEeecCccceee-----------------cCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEE
Confidence 1233445566666655541 23455666766533322221 1122334566766543 244
Q ss_pred EEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 150 VCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 150 v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
++......|..++....+ ....+. .-.+....+++.++|++.++...
T Consensus 189 ~s~~~d~~i~i~d~~~~~--~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~ 235 (340)
T 4aow_A 189 VSCGWDKLVKVWNLANCK--LKTNHI-GHTGYLNTVTVSPDGSLCASGGK 235 (340)
T ss_dssp EEEETTSCEEEEETTTTE--EEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEcCCCEEEEEECCCCc--eeeEec-CCCCcEEEEEECCCCCEEEEEeC
Confidence 555556678888865421 111221 12234567889999987766654
No 287
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.24 E-value=0.018 Score=51.82 Aligned_cols=141 Identities=11% Similarity=-0.023 Sum_probs=85.0
Q ss_pred CCCcEEEEecCCeEEEEE--CCceE--EEEeeCCccccCe--EECCCC-cEEEEeCC-CceEEEc-cCC--cEEEeeecC
Q 023085 3 KNGVIYTATRDGWIKRLQ--DGTWV--NWKFIDSQTLVGL--TSTKEG-HLIICDNA-NGLHKVS-EDG--VENFLSYVN 71 (287)
Q Consensus 3 ~~G~l~~~~~~g~i~~~~--~~~~~--~~~~~~~~~~~~i--~~d~dg-~l~v~~~~-~gi~~~~-~~g--~~~~~~~~~ 71 (287)
+++.|..|+.+|.|..|+ ++... .+........ ++ +..++| ++.++... +.|...| +++ ...+.....
T Consensus 276 ~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~-sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~ 354 (524)
T 2j04_B 276 SPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYIL-SVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFR 354 (524)
T ss_dssp SSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEE-EEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECS
T ss_pred CCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEE-EEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccc
Confidence 345788888999999999 34322 2222222223 66 456777 76665434 3466677 565 333322211
Q ss_pred CccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCee-EEeeccccccceEEEccCCCEEEE
Q 023085 72 GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT-TLVADGFYFANGVALSRDEDYVVV 150 (287)
Q Consensus 72 ~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~l~v 150 (287)
...+..+++.+++..+++. ...+.|..+|..++.. ..+.........++++|+++.|..
T Consensus 355 ---~~~v~~v~fsp~~~~l~s~-----------------~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~S 414 (524)
T 2j04_B 355 ---GSNLVPVVYCPQIYSYIYS-----------------DGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLA 414 (524)
T ss_dssp ---CCSCCCEEEETTTTEEEEE-----------------CSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEE
T ss_pred ---cCcccceEeCCCcCeEEEe-----------------CCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEE
Confidence 1135778999999877752 2245677778765543 333344456678999999985554
Q ss_pred EeCCCCEEEEEEecC
Q 023085 151 CESWKFRCRKYWLKG 165 (287)
Q Consensus 151 ~~~~~~~l~~~~~~~ 165 (287)
+ +..+.|..+++..
T Consensus 415 g-s~Dgtv~lwd~~~ 428 (524)
T 2j04_B 415 G-SADGSLIITNAAR 428 (524)
T ss_dssp E-ETTTEEECCBSCS
T ss_pred E-ECCCEEEEEechH
Confidence 4 4567888888654
No 288
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.23 E-value=0.086 Score=45.70 Aligned_cols=136 Identities=13% Similarity=0.089 Sum_probs=65.8
Q ss_pred cEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCCCceEEEc-cCC-cEEEeeecCCccccccceE
Q 023085 6 VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDV 81 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l 81 (287)
.|..++.+|.|..|+ +++..........+...+.++ ++.++.+...+.|..++ .++ .........+ ....+..+
T Consensus 185 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~ 262 (435)
T 1p22_A 185 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-NGMMVTCSKDRSIAVWDMASPTDITLRRVLVG-HRAAVNVV 262 (435)
T ss_dssp EEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC-TTEEEEEETTSCEEEEECSSSSCCEEEEEECC-CSSCEEEE
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc-CCEEEEeeCCCcEEEEeCCCCCCceeeeEecC-CCCcEEEE
Confidence 455566677777777 343322222212222144443 23455555444566666 444 2211111111 11244555
Q ss_pred EEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEe-eccccccceEEEccCCCEEEEEeCCCCEEEE
Q 023085 82 VEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYVVVCESWKFRCRK 160 (287)
Q Consensus 82 ~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~ 160 (287)
.. ++...++ +..++.|..+|..+++.... .........+.+ +++.++.+. ..+.|..
T Consensus 263 ~~--~~~~l~s-----------------~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~-~dg~i~i 320 (435)
T 1p22_A 263 DF--DDKYIVS-----------------ASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGS-SDNTIRL 320 (435)
T ss_dssp EE--ETTEEEE-----------------EETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEE-TTSCEEE
T ss_pred Ee--CCCEEEE-----------------EeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEe-CCCeEEE
Confidence 55 3444443 23356788888876654332 222223334444 466555554 5678999
Q ss_pred EEecC
Q 023085 161 YWLKG 165 (287)
Q Consensus 161 ~~~~~ 165 (287)
||+..
T Consensus 321 wd~~~ 325 (435)
T 1p22_A 321 WDIEC 325 (435)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 99754
No 289
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.23 E-value=0.05 Score=50.57 Aligned_cols=128 Identities=15% Similarity=-0.016 Sum_probs=70.2
Q ss_pred eEEEc-cCC-cEEEeeecC---CccccccceEEEcCCCcEEE-E-cCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeE
Q 023085 55 LHKVS-EDG-VENFLSYVN---GSKLRFANDVVEASDGSLYF-T-VSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT 127 (287)
Q Consensus 55 i~~~~-~~g-~~~~~~~~~---~~~~~~~~~l~~d~~g~l~v-~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 127 (287)
|++.+ ..+ .+.+..... +. ...+.++++.+||+..+ + +.+ +.....|+.+|..+++..
T Consensus 96 l~~~~~~~~~~~~l~d~~~~a~~~-~~~~~~~~~SPDG~~la~~~~~~--------------G~~~~~i~v~dl~tg~~~ 160 (695)
T 2bkl_A 96 LYWRQGESGQEKVLLDPNGWSKDG-TVSLGTWAVSWDGKKVAFAQKPN--------------AADEAVLHVIDVDSGEWS 160 (695)
T ss_dssp EEEEESTTSCCEEEECGGGSSSSS-CEEEEEEEECTTSSEEEEEEEET--------------TCSCCEEEEEETTTCCBC
T ss_pred EEEEcCCCCCcEEEEchHHhccCC-CEEEEEEEECCCCCEEEEEECCC--------------CCceEEEEEEECCCCCCc
Confidence 67776 445 566543211 11 12456788999997544 2 111 122357999999887753
Q ss_pred Eeecccccc--ceEEEccCCCEEEEEeCCC------------CEEEEEEecCCCCcceeEEeccC-CCCCcceeeCCCCC
Q 023085 128 LVADGFYFA--NGVALSRDEDYVVVCESWK------------FRCRKYWLKGERKGKLETFAENL-PGAPDNINLAPDGT 192 (287)
Q Consensus 128 ~~~~~~~~~--~~i~~~~~~~~l~v~~~~~------------~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~d~~G~ 192 (287)
. ...+... .+++|+|||+.|+.+.... ..|+++++.++.......+.... .....++.+++||+
T Consensus 161 ~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~ 239 (695)
T 2bkl_A 161 K-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGK 239 (695)
T ss_dssp S-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSC
T ss_pred C-CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCC
Confidence 1 1112222 6789999999888776432 34889887654322122222111 11234677889985
Q ss_pred -EEEEEe
Q 023085 193 -FWIAII 198 (287)
Q Consensus 193 -lwv~~~ 198 (287)
|.++..
T Consensus 240 ~l~~~~~ 246 (695)
T 2bkl_A 240 YLFVYIL 246 (695)
T ss_dssp CEEEEEE
T ss_pred EEEEEEe
Confidence 444443
No 290
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.23 E-value=0.063 Score=43.99 Aligned_cols=168 Identities=13% Similarity=0.092 Sum_probs=86.0
Q ss_pred CCCCc-EEEEecCCeEEEEE-CC-c--e-EEEEeeCCccccCeEECC--CCcEEEE-eCCCceEEEc-cCC-cEEEeeec
Q 023085 2 DKNGV-IYTATRDGWIKRLQ-DG-T--W-VNWKFIDSQTLVGLTSTK--EGHLIIC-DNANGLHKVS-EDG-VENFLSYV 70 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~-~~-~--~-~~~~~~~~~~~~~i~~d~--dg~l~v~-~~~~gi~~~~-~~g-~~~~~~~~ 70 (287)
+++|. |..++.++.|..|+ .+ . . ..+........ .+++.+ +|++.++ ...+.|...+ .++ ...+....
T Consensus 18 s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~-~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~ 96 (297)
T 2pm7_B 18 DYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHA 96 (297)
T ss_dssp CTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEE-EEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEEC
T ss_pred CCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeE-EEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEee
Confidence 56774 55666888888888 32 2 1 12222222233 677764 4766555 4334466666 554 32221111
Q ss_pred CCccccccceEEEcCC--CcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe---eEEeeccccccceEEEccC-
Q 023085 71 NGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI---TTLVADGFYFANGVALSRD- 144 (287)
Q Consensus 71 ~~~~~~~~~~l~~d~~--g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~~~i~~~~~- 144 (287)
.....+.++++.++ |.++++. ..++.|..++..++. ...+.........++++|+
T Consensus 97 --~h~~~v~~v~~~p~~~g~~l~s~-----------------s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 97 --VHSASVNSVQWAPHEYGPMLLVA-----------------SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (297)
T ss_dssp --CCSSCEEEEEECCGGGCSEEEEE-----------------ETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC
T ss_pred --cCCCceeEEEeCcCCCCcEEEEE-----------------ECCCcEEEEEecCCCceeeeeeecccCccceEeecCCc
Confidence 11235778888876 6666642 234566666655332 1222222334456777775
Q ss_pred ------------CCEEEEEeCCCCEEEEEEecCCCCc--ceeEEeccCCCCCcceeeCCCC
Q 023085 145 ------------EDYVVVCESWKFRCRKYWLKGERKG--KLETFAENLPGAPDNINLAPDG 191 (287)
Q Consensus 145 ------------~~~l~v~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~d~~G 191 (287)
++ ++++....+.|..|++...... ....+. .-......+++.+++
T Consensus 158 ~~~~~~~~~~~~~~-~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-~H~~~V~~v~~sp~~ 216 (297)
T 2pm7_B 158 IEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTV 216 (297)
T ss_dssp ------------CC-EEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCC
T ss_pred ccccccCCCCCCcc-eEEEEcCCCcEEEEEEcCCCceEEEEEEec-CCCCceEEEEECCCC
Confidence 34 4444445677888887643211 111111 111235678888875
No 291
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.20 E-value=0.094 Score=45.53 Aligned_cols=131 Identities=12% Similarity=0.049 Sum_probs=67.5
Q ss_pred CCceEEEEeCCCCeeEEee-ccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCC
Q 023085 112 PHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPD 190 (287)
Q Consensus 112 ~~~~v~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~ 190 (287)
..+.|..+|..+++..... ........+.+ +++.++.+. ..+.|..||+...+ ....+. ........+.. +
T Consensus 257 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d~~i~i~d~~~~~--~~~~~~-~~~~~v~~~~~--~ 328 (445)
T 2ovr_B 257 YDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGS-LDTSIRVWDVETGN--CIHTLT-GHQSLTSGMEL--K 328 (445)
T ss_dssp TTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEE-TTSCEEEEETTTCC--EEEEEC-CCCSCEEEEEE--E
T ss_pred CCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEe-CCCeEEEEECCCCC--EEEEEc-CCcccEEEEEE--e
Confidence 3456777777656543322 22223344554 677666665 45779999975432 111221 11112333444 3
Q ss_pred CCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEECCCCccccceEEEEEeCC
Q 023085 191 GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDN 269 (287)
Q Consensus 191 G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g 269 (287)
+++.++... .+.|..++. .++.+..+..+... ...+.++..++.
T Consensus 329 ~~~l~~~~~----------------------------------dg~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~ 373 (445)
T 2ovr_B 329 DNILVSGNA----------------------------------DSTVKIWDIKTGQCLQTLQGPNKH-QSAVTCLQFNKN 373 (445)
T ss_dssp TTEEEEEET----------------------------------TSCEEEEETTTCCEEEEECSTTSC-SSCEEEEEECSS
T ss_pred CCEEEEEeC----------------------------------CCeEEEEECCCCcEEEEEccCCCC-CCCEEEEEECCC
Confidence 444444433 246667775 46677776643221 234666666554
Q ss_pred EEEEEecCCCeEEEEeC
Q 023085 270 HLYVISLTSNFIGKVQL 286 (287)
Q Consensus 270 ~l~i~~~~~~~i~~~~~ 286 (287)
.|..+ ...+.|.++++
T Consensus 374 ~l~s~-~~dg~v~iwd~ 389 (445)
T 2ovr_B 374 FVITS-SDDGTVKLWDL 389 (445)
T ss_dssp EEEEE-ETTSEEEEEET
T ss_pred EEEEE-eCCCeEEEEEC
Confidence 44444 45567777765
No 292
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.20 E-value=0.08 Score=44.69 Aligned_cols=86 Identities=16% Similarity=0.117 Sum_probs=51.3
Q ss_pred CCCceEEEEeCCCCe-----------------eEEeeccccccceEEEccCCCEEEEEeCCCCE-EEEEEecCCCCccee
Q 023085 111 KPHGQLLKYDPSSNI-----------------TTLVADGFYFANGVALSRDEDYVVVCESWKFR-CRKYWLKGERKGKLE 172 (287)
Q Consensus 111 ~~~~~v~~~~~~~~~-----------------~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~-l~~~~~~~~~~~~~~ 172 (287)
...+.|..+|..++. +..+.........++++|+++.|..+. ..+. |..||+...+ ...
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s-~d~~~v~iwd~~~~~--~~~ 232 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCS-QDGTIIRVFKTEDGV--LVR 232 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEE-TTCSEEEEEETTTCC--EEE
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEe-CCCCEEEEEECCCCc--EEE
Confidence 445678888876544 333333344567889999998655554 4566 8888875432 122
Q ss_pred EEecc-CCCCCcceeeCCCCCEEEEEec
Q 023085 173 TFAEN-LPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 173 ~~~~~-~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
.+... -.+....+++.++|++.++...
T Consensus 233 ~~~~g~h~~~v~~~~~s~~~~~l~s~s~ 260 (355)
T 3vu4_A 233 EFRRGLDRADVVDMKWSTDGSKLAVVSD 260 (355)
T ss_dssp EEECTTCCSCEEEEEECTTSCEEEEEET
T ss_pred EEEcCCCCCcEEEEEECCCCCEEEEEEC
Confidence 23211 2234667889999987666544
No 293
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.19 E-value=0.072 Score=44.09 Aligned_cols=88 Identities=18% Similarity=0.203 Sum_probs=48.5
Q ss_pred CCCCc-EEEEecCCeEEEEE--CCceEE---EEeeCCccccCeEECC--CCcEE-EEeCCCceEEEc-cCC-cEEEeeec
Q 023085 2 DKNGV-IYTATRDGWIKRLQ--DGTWVN---WKFIDSQTLVGLTSTK--EGHLI-ICDNANGLHKVS-EDG-VENFLSYV 70 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~--~~~~~~---~~~~~~~~~~~i~~d~--dg~l~-v~~~~~gi~~~~-~~g-~~~~~~~~ 70 (287)
+++|. |..++.++.|..|+ ++.... +........ .+++.+ +++++ .+...+.|...+ +++ ........
T Consensus 22 s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~-~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~ 100 (316)
T 3bg1_A 22 DYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVW-QVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHA 100 (316)
T ss_dssp CGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEE-EEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEEC
T ss_pred cCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEE-EEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEcc
Confidence 45664 55666888888888 443222 222222334 777764 36544 444445577777 555 33332211
Q ss_pred CCccccccceEEEcCC--CcEEEE
Q 023085 71 NGSKLRFANDVVEASD--GSLYFT 92 (287)
Q Consensus 71 ~~~~~~~~~~l~~d~~--g~l~v~ 92 (287)
+ ....++++++.++ |.++++
T Consensus 101 -~-h~~~V~~v~~~p~~~g~~las 122 (316)
T 3bg1_A 101 -G-HDSSVNSVCWAPHDYGLILAC 122 (316)
T ss_dssp -C-CSSCCCEEEECCTTTCSCEEE
T ss_pred -C-CCCceEEEEECCCCCCcEEEE
Confidence 1 1235788888876 666664
No 294
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.17 E-value=0.065 Score=44.64 Aligned_cols=116 Identities=12% Similarity=0.083 Sum_probs=68.7
Q ss_pred ceEEEc-cCC-cEEEeeecCCccccccceEEEcCCCc-EEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee
Q 023085 54 GLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA 130 (287)
Q Consensus 54 gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 130 (287)
.|+.++ .++ ...+ ..+..+++.++|. |.++... .......|+.++..+++...+.
T Consensus 44 ~l~~~d~~~~~~~~l---------~~~~~~~~SpDg~~la~~~~~-------------~~~~~~~l~~~~~~~g~~~~l~ 101 (347)
T 2gop_A 44 TIVIENLKNNARRFI---------ENATMPRISPDGKKIAFMRAN-------------EEKKVSEIWVADLETLSSKKIL 101 (347)
T ss_dssp EEEEEETTTCCEEEE---------ESCEEEEECTTSSEEEEEEEE-------------TTTTEEEEEEEETTTTEEEEEE
T ss_pred eEEEEeCCCCceEEc---------ccCCCeEECCCCCEEEEEEec-------------cCCCcceEEEEECCCCceEEEE
Confidence 467777 445 4443 2456778999986 4332100 0012346999998877766554
Q ss_pred ccccccceEEEccCCCEEEEEeCC--------------------------CCEEEEEEecCCCCcceeEEeccCCCCCcc
Q 023085 131 DGFYFANGVALSRDEDYVVVCESW--------------------------KFRCRKYWLKGERKGKLETFAENLPGAPDN 184 (287)
Q Consensus 131 ~~~~~~~~i~~~~~~~~l~v~~~~--------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (287)
.... ...++++||++.|+++... ...|+++++++++. ...+.. + ....
T Consensus 102 ~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~--~~~l~~--~-~~~~ 175 (347)
T 2gop_A 102 EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV--IEEFEK--P-RFSS 175 (347)
T ss_dssp EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE--EEEEEE--E-TTCE
T ss_pred cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE--EeeecC--C-Cccc
Confidence 3333 6778899999988777532 24688888754321 022221 2 4567
Q ss_pred eeeCCCCCEEEEEe
Q 023085 185 INLAPDGTFWIAII 198 (287)
Q Consensus 185 i~~d~~G~lwv~~~ 198 (287)
+++.++| +.++..
T Consensus 176 ~~~spdg-~~~~~~ 188 (347)
T 2gop_A 176 GIWHRDK-IVVNVP 188 (347)
T ss_dssp EEEETTE-EEEEEE
T ss_pred ccCCCCe-EEEEEe
Confidence 7888888 665553
No 295
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.16 E-value=0.082 Score=44.01 Aligned_cols=107 Identities=20% Similarity=0.171 Sum_probs=69.4
Q ss_pred CeEECCC---CcEEEE-eCCCceEEEc-cC-C-cE-EEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeee
Q 023085 37 GLTSTKE---GHLIIC-DNANGLHKVS-ED-G-VE-NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDIL 108 (287)
Q Consensus 37 ~i~~d~d---g~l~v~-~~~~gi~~~~-~~-g-~~-~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~ 108 (287)
.+++.++ |++.++ ...+.|..++ .+ + .. ..... ....+.++++.+++..+++.
T Consensus 44 ~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~--------------- 104 (368)
T 3mmy_A 44 CLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQM----HTGPVLDVCWSDDGSKVFTA--------------- 104 (368)
T ss_dssp EEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEE----CSSCEEEEEECTTSSEEEEE---------------
T ss_pred EEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecc----ccCCEEEEEECcCCCEEEEE---------------
Confidence 7889998 565444 4444566677 54 4 22 22111 12467889999999876652
Q ss_pred ccCCCceEEEEeCCCCeeEEeeccccccceEEE--ccCCCEEEEEeCCCCEEEEEEecC
Q 023085 109 EGKPHGQLLKYDPSSNITTLVADGFYFANGVAL--SRDEDYVVVCESWKFRCRKYWLKG 165 (287)
Q Consensus 109 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~l~v~~~~~~~l~~~~~~~ 165 (287)
..++.|..+|..+++.............+++ +++++.++.+. ..+.|..|++..
T Consensus 105 --~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~ 160 (368)
T 3mmy_A 105 --SCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGS-WDKTLKFWDTRS 160 (368)
T ss_dssp --ETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEE-TTSEEEEECSSC
T ss_pred --cCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEcc-CCCcEEEEECCC
Confidence 2356788889887776655444455677888 78887555554 467899998754
No 296
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.12 E-value=0.0075 Score=52.60 Aligned_cols=102 Identities=12% Similarity=0.054 Sum_probs=59.7
Q ss_pred ccceEEEcC-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee---ccccccceEEEcc-CCCEEEEE
Q 023085 77 FANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA---DGFYFANGVALSR-DEDYVVVC 151 (287)
Q Consensus 77 ~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~~~i~~~~-~~~~l~v~ 151 (287)
.+++|++++ ++++.++ +..++.|..+|..+++..... ........++|+| +++. +++
T Consensus 121 ~V~~l~~~P~~~~~las-----------------Gs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~-l~s 182 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAV-----------------GSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQ-FYA 182 (435)
T ss_dssp CEEEEEECSSCTTCEEE-----------------EETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTE-EEE
T ss_pred CEEEEEEeCCCCCEEEE-----------------EeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCE-EEE
Confidence 477888887 4555553 234567777876655432222 2334567899998 5664 445
Q ss_pred eCCCCEEEEEEecCCCCcceeEEecc--CCCCCcceeeCCCCCEEEEEec
Q 023085 152 ESWKFRCRKYWLKGERKGKLETFAEN--LPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 152 ~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
.+..+.|..||+.+. ....+... .......++++++|++.++...
T Consensus 183 ~s~D~~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 229 (435)
T 4e54_B 183 SSMEGTTRLQDFKGN---ILRVFASSDTINIWFCSLDVSASSRMVVTGDN 229 (435)
T ss_dssp ECSSSCEEEEETTSC---EEEEEECCSSCSCCCCCEEEETTTTEEEEECS
T ss_pred EeCCCEEEEeeccCC---ceeEEeccCCCCccEEEEEECCCCCEEEEEeC
Confidence 556678989987542 22222211 1123456778888876665544
No 297
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.10 E-value=0.18 Score=46.81 Aligned_cols=58 Identities=17% Similarity=0.218 Sum_probs=36.5
Q ss_pred CCcEEEEecCCeEEEEE--CCceEEEEeeCCc-----cccCeEECCCCcEEEEeCC------CceEEEc-cCC
Q 023085 4 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQ-----TLVGLTSTKEGHLIICDNA------NGLHKVS-EDG 62 (287)
Q Consensus 4 ~G~l~~~~~~g~i~~~~--~~~~~~~~~~~~~-----~~~~i~~d~dg~l~v~~~~------~gi~~~~-~~g 62 (287)
++.||+++.++.|+.+| +|+.......... ......+ .++.++++... ..|+.+| .+|
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG 188 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTG 188 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCC
Confidence 56899999999999999 6765433322111 1102222 26788887542 3489999 778
No 298
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.10 E-value=0.16 Score=46.39 Aligned_cols=112 Identities=14% Similarity=0.097 Sum_probs=60.7
Q ss_pred CCcEEEEec-CCeEEEEE---CCceEEEEeeCCc-----------cccCeEEC-CCCc----EEEEeCCCceEEEc-cCC
Q 023085 4 NGVIYTATR-DGWIKRLQ---DGTWVNWKFIDSQ-----------TLVGLTST-KEGH----LIICDNANGLHKVS-EDG 62 (287)
Q Consensus 4 ~G~l~~~~~-~g~i~~~~---~~~~~~~~~~~~~-----------~~~~i~~d-~dg~----l~v~~~~~gi~~~~-~~g 62 (287)
+|.||+++. ++.|+.++ +|+.......... ...++++. .+++ ||+++....|+.+| .+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 578999997 78999998 3554322222110 11256663 2556 99998666799999 788
Q ss_pred cEEEeeecCCc-cccccc-eEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE
Q 023085 63 VENFLSYVNGS-KLRFAN-DVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL 128 (287)
Q Consensus 63 ~~~~~~~~~~~-~~~~~~-~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 128 (287)
........... ....+. .-.+. +|.+++.....++ ...+.|+.+|.++|+...
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g~e~------------g~~g~v~A~D~~TG~~~W 196 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSGAEL------------GVRGYLTAYDVKTGEQVW 196 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TTEEEECCBCGGG------------TCCCEEEEEETTTCCEEE
T ss_pred CEEEeecCCCCCccceeecCCEEE-CCEEEEEeccccc------------CCCCeEEEEECCCCcEEE
Confidence 22222111110 000111 11122 5778885322111 024678888888777654
No 299
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.07 E-value=0.13 Score=48.17 Aligned_cols=164 Identities=13% Similarity=0.009 Sum_probs=85.4
Q ss_pred ccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCCC
Q 023085 77 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKF 156 (287)
Q Consensus 77 ~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~ 156 (287)
...++++.+||+..+.... ..+.....|+.+|..+++............+++|+|| +.|+++.....
T Consensus 164 ~~~~~~~SPDG~~la~~~~------------~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~ 230 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQ------------DGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEP 230 (741)
T ss_dssp EEEEEEECTTSSEEEEEEE------------ETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC
T ss_pred EEEeEEECCCCCEEEEEEc------------CCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCc
Confidence 4567888999974432100 0011124699999988876433111111257889999 88888764332
Q ss_pred -------------EEEEEEecCCCCcceeEEeccC-CCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHHhC
Q 023085 157 -------------RCRKYWLKGERKGKLETFAENL-PGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAY 221 (287)
Q Consensus 157 -------------~l~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (287)
.|+++++.++.......+.... +....++.+++||+ |.++....
T Consensus 231 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~--------------------- 289 (741)
T 1yr2_A 231 KEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG--------------------- 289 (741)
T ss_dssp --------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT---------------------
T ss_pred ccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc---------------------
Confidence 4888886543211122222111 11234577888996 44444331
Q ss_pred CccccccccCCCceEEEEECCCCc--E-EEEEECCCCccccceEEEEEeCCEEEEEecC---CCeEEEEeC
Q 023085 222 PKLFSQFITLGGGAHLIHVAEDGT--I-IRNLVDPTGQLMSFVTSGLQVDNHLYVISLT---SNFIGKVQL 286 (287)
Q Consensus 222 ~~~~~~~~~~~~~~~v~~~~~~g~--~-~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~---~~~i~~~~~ 286 (287)
......|+.++.++. . ...+...... ....+..+++.||+.+.. ...|.++++
T Consensus 290 ---------~~~~~~l~~~d~~~~~~~~~~~l~~~~~~---~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~ 348 (741)
T 1yr2_A 290 ---------TDPVNTVHVARVTNGKIGPVTALIPDLKA---QWDFVDGVGDQLWFVSGDGAPLKKIVRVDL 348 (741)
T ss_dssp ---------TCSCCEEEEEEEETTEECCCEEEECSSSS---CEEEEEEETTEEEEEECTTCTTCEEEEEEC
T ss_pred ---------CCCcceEEEEECCCCCCcccEEecCCCCc---eEEEEeccCCEEEEEECCCCCCCEEEEEeC
Confidence 001236666665433 2 4444432221 122233567788887754 335777665
No 300
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.04 E-value=0.13 Score=44.35 Aligned_cols=105 Identities=10% Similarity=0.034 Sum_probs=61.4
Q ss_pred ECCCCcEEEE-eCCCceEEEc-cCC--cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCce
Q 023085 40 STKEGHLIIC-DNANGLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQ 115 (287)
Q Consensus 40 ~d~dg~l~v~-~~~~gi~~~~-~~g--~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 115 (287)
..+++++.++ ...+.|..++ +++ ...+... .....+.++++++++.+.++. ..++.
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~h~~~v~~~~~s~~~~~l~s~-----------------~~dg~ 237 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRTLERLQIIENS---PRHGAVSSICIDEECCVLILG-----------------TTRGI 237 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTTCCEEEEEECC---GGGCCEEEEEECTTSCEEEEE-----------------ETTSC
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccC---CCCCceEEEEECCCCCEEEEE-----------------cCCCe
Confidence 3467765444 4445677788 666 3333211 122467889999999877752 23567
Q ss_pred EEEEeCCCCeeEEee--ccccccceEEEc----cCCCEEEEEeCCCCEEEEEEecC
Q 023085 116 LLKYDPSSNITTLVA--DGFYFANGVALS----RDEDYVVVCESWKFRCRKYWLKG 165 (287)
Q Consensus 116 v~~~~~~~~~~~~~~--~~~~~~~~i~~~----~~~~~l~v~~~~~~~l~~~~~~~ 165 (287)
|..+|..+++..... ........+++. +++. +.++....+.|..||+..
T Consensus 238 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~-~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 238 IDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSV-IVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp EEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEE-EEEEESTTEEEEEEETTT
T ss_pred EEEEEcCCccEEEEEecCCCCceEEEEeccccCCCcc-EEEEEcCCCcEEEEEcCC
Confidence 888888766643322 222334566454 3454 444445566788888753
No 301
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.03 E-value=0.14 Score=44.37 Aligned_cols=208 Identities=11% Similarity=0.052 Sum_probs=107.0
Q ss_pred cEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcE-EEEeCCCceEEEc-cCC--cEEEeeecCCccccccc
Q 023085 6 VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHL-IICDNANGLHKVS-EDG--VENFLSYVNGSKLRFAN 79 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l-~v~~~~~gi~~~~-~~g--~~~~~~~~~~~~~~~~~ 79 (287)
.|..|+.+|.|..|+ +++..........++..+.+ ++++ +.+...+.|..++ .++ ...+.. ....+.
T Consensus 145 ~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-----h~~~v~ 217 (435)
T 1p22_A 145 KIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIH-----HCEAVL 217 (435)
T ss_dssp EEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECC-----CCSCEE
T ss_pred EEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcC-----CCCcEE
Confidence 466777889999999 44443332222222214554 5654 4445445577788 666 333321 123456
Q ss_pred eEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeE----EeeccccccceEEEccCCCEEEEEeCCC
Q 023085 80 DVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT----LVADGFYFANGVALSRDEDYVVVCESWK 155 (287)
Q Consensus 80 ~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~~l~v~~~~~ 155 (287)
++.++ +...++ +..++.|..+|..+++.. ...........+.+ +++.++.+. ..
T Consensus 218 ~l~~~--~~~l~s-----------------~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~-~d 275 (435)
T 1p22_A 218 HLRFN--NGMMVT-----------------CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSAS-GD 275 (435)
T ss_dssp EEECC--TTEEEE-----------------EETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEE-TT
T ss_pred EEEEc--CCEEEE-----------------eeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEe-CC
Confidence 66665 334443 223456777776654422 11122223344554 577666665 46
Q ss_pred CEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCce
Q 023085 156 FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGA 235 (287)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
+.|..||+...+ ....+. ........+.++ +++.++... .+
T Consensus 276 g~i~vwd~~~~~--~~~~~~-~~~~~v~~~~~~--~~~l~~g~~----------------------------------dg 316 (435)
T 1p22_A 276 RTIKVWNTSTCE--FVRTLN-GHKRGIACLQYR--DRLVVSGSS----------------------------------DN 316 (435)
T ss_dssp SEEEEEETTTCC--EEEEEE-CCSSCEEEEEEE--TTEEEEEET----------------------------------TS
T ss_pred CeEEEEECCcCc--EEEEEc-CCCCcEEEEEeC--CCEEEEEeC----------------------------------CC
Confidence 789999975432 122222 111223345553 444444433 24
Q ss_pred EEEEECCC-CcEEEEEECCCCccccceEEEEEeCCEEEEEecCCCeEEEEeC
Q 023085 236 HLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 236 ~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 286 (287)
.|..+|.+ ++.+..+.... ..+.++..++..|..++ ..+.|.++|+
T Consensus 317 ~i~iwd~~~~~~~~~~~~h~----~~v~~~~~~~~~l~sg~-~dg~i~vwd~ 363 (435)
T 1p22_A 317 TIRLWDIECGACLRVLEGHE----ELVRCIRFDNKRIVSGA-YDGKIKVWDL 363 (435)
T ss_dssp CEEEEETTTCCEEEEECCCS----SCEEEEECCSSEEEEEE-TTSCEEEEEH
T ss_pred eEEEEECCCCCEEEEEeCCc----CcEEEEEecCCEEEEEe-CCCcEEEEEC
Confidence 67777754 66666665432 24566666555555555 4456766654
No 302
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.00 E-value=0.01 Score=53.91 Aligned_cols=73 Identities=16% Similarity=0.216 Sum_probs=50.7
Q ss_pred ccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeecc--ccccceEEEccCCCEEEEEe
Q 023085 75 LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FYFANGVALSRDEDYVVVCE 152 (287)
Q Consensus 75 ~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~l~v~~ 152 (287)
+..|..|++++.|+|||+..+..-....+ .......++.+++.++++.+++.. .....|++|+||+++||+.-
T Consensus 475 f~~PDNL~fd~~G~LwI~eDg~~~~~~~~-----~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 475 FNSPDGLGFDKAGRLWILTDGDSSNAGDF-----AGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCCEEEEEECTTCCEEEEECCCCCCSGGG-----TTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred ccCCcceEECCCCCEEEEecCCCcccccc-----cccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 56789999999999999854421110000 112345788899988998887643 23456899999999998874
No 303
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.00 E-value=0.04 Score=53.07 Aligned_cols=141 Identities=6% Similarity=-0.023 Sum_probs=84.1
Q ss_pred Cc-EEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcE-EEEeCCCceEEEc-cCC-cEEEee-------ecC
Q 023085 5 GV-IYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHL-IICDNANGLHKVS-EDG-VENFLS-------YVN 71 (287)
Q Consensus 5 G~-l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l-~v~~~~~gi~~~~-~~g-~~~~~~-------~~~ 71 (287)
|. |..++.++.|..|+ +++............ .++++++++. +++...+.|..++ +++ ...+.. ...
T Consensus 69 g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~-~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~ 147 (902)
T 2oaj_A 69 GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKIT-SIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFP 147 (902)
T ss_dssp TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEE-EEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCS
T ss_pred CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEE-EEEECCCCCEEEEEcCCCcEEEEECCCCccccceecccccccccc
Confidence 44 66667889999999 444332222233334 7889999964 5555445577787 555 433221 001
Q ss_pred CccccccceEEEcCCC-cEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeec-c-----------------
Q 023085 72 GSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-G----------------- 132 (287)
Q Consensus 72 ~~~~~~~~~l~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~----------------- 132 (287)
......+.++++++++ .+.++ +...+.| .+|.++++...... .
T Consensus 148 ~~h~~~V~sl~~sp~~~~~l~~-----------------g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (902)
T 2oaj_A 148 AARLSPIVSIQWNPRDIGTVLI-----------------SYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEK 209 (902)
T ss_dssp SSCCCCCCEEEEETTEEEEEEE-----------------ECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSC
T ss_pred ccCCCCeEEEEEccCCCCEEEE-----------------EeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccc
Confidence 1123467889999863 44443 2235667 88887666433221 1
Q ss_pred -ccccceEEEccCCCEEEEEeCCCCEEEEEEecC
Q 023085 133 -FYFANGVALSRDEDYVVVCESWKFRCRKYWLKG 165 (287)
Q Consensus 133 -~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~ 165 (287)
......++|+|+++.|..+. ..+.|..||...
T Consensus 210 h~~~V~~v~fspdg~~lasgs-~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 210 RTPKVIQSLYHPNSLHIITIH-EDNSLVFWDANS 242 (902)
T ss_dssp BCCCEEEEEECTTSSEEEEEE-TTCCEEEEETTT
T ss_pred cCCCeEEEEEcCCCCEEEEEE-CCCeEEEEECCC
Confidence 12356789999998655554 467788998754
No 304
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.97 E-value=0.11 Score=42.42 Aligned_cols=174 Identities=13% Similarity=0.137 Sum_probs=87.2
Q ss_pred Cc-EEEEecCCeEEEEE--CCceEE---EEeeCCccccCeEECCC--CcEEE-EeCCCceEEEc-cCC--cEEEeeecCC
Q 023085 5 GV-IYTATRDGWIKRLQ--DGTWVN---WKFIDSQTLVGLTSTKE--GHLII-CDNANGLHKVS-EDG--VENFLSYVNG 72 (287)
Q Consensus 5 G~-l~~~~~~g~i~~~~--~~~~~~---~~~~~~~~~~~i~~d~d--g~l~v-~~~~~gi~~~~-~~g--~~~~~~~~~~ 72 (287)
|. |..++.++.|..|+ +++... +........ .+++.++ |.+.+ +...+.|..++ +++ ....... +
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~--~ 143 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID--A 143 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE--C
T ss_pred CCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCcee-EEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee--c
Confidence 53 55666888888888 443222 111122233 7788876 65544 44444466666 433 2111110 0
Q ss_pred ccccccceEEEcCC-------------CcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe----e-EEeecccc
Q 023085 73 SKLRFANDVVEASD-------------GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI----T-TLVADGFY 134 (287)
Q Consensus 73 ~~~~~~~~l~~d~~-------------g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~-~~~~~~~~ 134 (287)
....++.+++.++ +.++++ +..++.|..+|..+++ . ..+.....
T Consensus 144 -h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~s-----------------gs~D~~v~lwd~~~~~~~~~~~~~l~~H~~ 205 (297)
T 2pm7_B 144 -HAIGVNSASWAPATIEEDGEHNGTKESRKFVT-----------------GGADNLVKIWKYNSDAQTYVLESTLEGHSD 205 (297)
T ss_dssp -CSSCEEEEEECCCC------------CCEEEE-----------------EETTSCEEEEEEETTTTEEEEEEEECCCSS
T ss_pred -ccCccceEeecCCcccccccCCCCCCcceEEE-----------------EcCCCcEEEEEEcCCCceEEEEEEecCCCC
Confidence 1124556666664 344443 1223445545443222 1 12222334
Q ss_pred ccceEEEccCC--CEEEEEeCCCCEEEEEEecCCCCcceeEEe--ccCCCCCcceeeCCCCCEEEEEec
Q 023085 135 FANGVALSRDE--DYVVVCESWKFRCRKYWLKGERKGKLETFA--ENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 135 ~~~~i~~~~~~--~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
....++|+|++ ..++++.+..+.|..|+.+........... .........+++.++|++.++...
T Consensus 206 ~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~ 274 (297)
T 2pm7_B 206 WVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (297)
T ss_dssp CEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET
T ss_pred ceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcC
Confidence 56788999985 335555556678888987643211111111 111223456778888876655543
No 305
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.95 E-value=0.25 Score=45.94 Aligned_cols=162 Identities=10% Similarity=0.005 Sum_probs=87.5
Q ss_pred ccceEEEcCCCcEEE--EcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCC
Q 023085 77 FANDVVEASDGSLYF--TVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESW 154 (287)
Q Consensus 77 ~~~~l~~d~~g~l~v--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~ 154 (287)
.+.++++.+||+..+ .+.. +.....|+.+|..+++............+++|+ |++.|+++...
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~--------------G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~ 194 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLA--------------GSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYD 194 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECS--------------SCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESS
T ss_pred EEEEEEECCCCCEEEEEEecC--------------CCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEec
Confidence 456778999997433 2222 112247899999888754332111113567899 99988887654
Q ss_pred C------------CEEEEEEecCCCCcceeEEeccC--CCCCcceeeCCCCC-EEEEEeccchhHHHHhhcchhHHHHHH
Q 023085 155 K------------FRCRKYWLKGERKGKLETFAENL--PGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLA 219 (287)
Q Consensus 155 ~------------~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~ 219 (287)
. ..|+++++..+.......+.... +....++..++||+ |.++...
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~-------------------- 254 (693)
T 3iuj_A 195 KPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAAN-------------------- 254 (693)
T ss_dssp CCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEES--------------------
T ss_pred CcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEcc--------------------
Confidence 2 45888887543222222222111 11123566788886 4444433
Q ss_pred hCCccccccccCCCceEEEEECCCCc--EEEEEECCCCccccceEEEEEeCCEEEEEecCC---CeEEEEeCC
Q 023085 220 AYPKLFSQFITLGGGAHLIHVAEDGT--IIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTS---NFIGKVQLS 287 (287)
Q Consensus 220 ~~~~~~~~~~~~~~~~~v~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~---~~i~~~~~~ 287 (287)
......|+.++.++. ....+...... ....+..+++.||+.+..+ ..|.+++++
T Consensus 255 -----------~~~~~~i~~~d~~~~~~~~~~l~~~~~~---~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~ 313 (693)
T 3iuj_A 255 -----------STSGNRLYVKDLSQENAPLLTVQGDLDA---DVSLVDNKGSTLYLLTNRDAPNRRLVTVDAA 313 (693)
T ss_dssp -----------SSSCCEEEEEETTSTTCCCEEEECSSSS---CEEEEEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred -----------CCCCcEEEEEECCCCCCceEEEeCCCCc---eEEEEeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 111236676664322 34444433221 1223445678888877653 578777763
No 306
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.90 E-value=0.021 Score=51.44 Aligned_cols=118 Identities=17% Similarity=0.192 Sum_probs=72.2
Q ss_pred ccceEEEccCCCEEEEEeCCC---------------------CEEEEEEecCCC----CcceeEEecc------------
Q 023085 135 FANGVALSRDEDYVVVCESWK---------------------FRCRKYWLKGER----KGKLETFAEN------------ 177 (287)
Q Consensus 135 ~~~~i~~~~~~~~l~v~~~~~---------------------~~l~~~~~~~~~----~~~~~~~~~~------------ 177 (287)
.|.+++++|....+|++-+++ +.|+++..++.. ..+...+...
T Consensus 385 RpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~~~ 464 (592)
T 4a9v_A 385 RPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPKG 464 (592)
T ss_dssp CEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGGG
T ss_pred CccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccccc
Confidence 467899999666699986532 579999875321 1122333210
Q ss_pred ---------CCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcEE
Q 023085 178 ---------LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTII 247 (287)
Q Consensus 178 ---------~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~ 247 (287)
.-..|++|++|++|+||+++-..... ...+ .......+++++|+ |+..
T Consensus 465 g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~------------------~g~~----~~~gnn~v~~~dp~tGel~ 522 (592)
T 4a9v_A 465 GSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSN------------------AGDF----AGMGNNQMLCADPATGEIR 522 (592)
T ss_dssp CCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCC------------------SGGG----TTCCSCEEEEECTTTCCEE
T ss_pred CccCccccCccCCCCceEECCCCCEEEEeCCCcCc------------------cccc----cccCCceEEEEeCCCCeEE
Confidence 11358999999999999987652110 0000 01123589999996 6655
Q ss_pred EEEECCCCccccceEEEEEe--CCEEEEEecC
Q 023085 248 RNLVDPTGQLMSFVTSGLQV--DNHLYVISLT 277 (287)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~ 277 (287)
..+..+.+ ..++++++. +..|||+-..
T Consensus 523 ~fl~~P~~---aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 523 RFMVGPIG---CEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp EEEECCTT---CEEEEEEECTTSSEEEEEEES
T ss_pred EEEeCCCC---ccccCCEECCCCCEEEEEEeC
Confidence 55554543 356777775 5789998653
No 307
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.87 E-value=0.26 Score=44.94 Aligned_cols=58 Identities=14% Similarity=0.116 Sum_probs=39.3
Q ss_pred CCcEEEEecCCeEEEEE--CCceEEEEeeCCcc---------ccCeEECCCCcEEEEeCCCceEEEc-cCC
Q 023085 4 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQT---------LVGLTSTKEGHLIICDNANGLHKVS-EDG 62 (287)
Q Consensus 4 ~G~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~---------~~~i~~d~dg~l~v~~~~~gi~~~~-~~g 62 (287)
+|.||+++..++|+.++ +|+........... ..++++ .+++||+++....|+.+| .+|
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~-~~~~v~~~t~dg~l~AlD~~TG 137 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI-YGDKVFFGTLDASVVALNKNTG 137 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE-ETTEEEEEETTTEEEEEESSSC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE-ECCEEEEEeCCCEEEEEECCCC
Confidence 57899999766799999 67654332222110 114454 367999998777799999 788
No 308
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.11 Score=47.17 Aligned_cols=139 Identities=12% Similarity=0.042 Sum_probs=82.3
Q ss_pred CCCCc-EEEEecCCeEEEEE-CCceEEEEeeCCc-----cccCeEECCCCc-EEEEeCCCceEEEc-cCC-c-E----EE
Q 023085 2 DKNGV-IYTATRDGWIKRLQ-DGTWVNWKFIDSQ-----TLVGLTSTKEGH-LIICDNANGLHKVS-EDG-V-E----NF 66 (287)
Q Consensus 2 d~~G~-l~~~~~~g~i~~~~-~~~~~~~~~~~~~-----~~~~i~~d~dg~-l~v~~~~~gi~~~~-~~g-~-~----~~ 66 (287)
.++|. |-.++.+|.|..|+ ++...... ... ...++++.|||+ |+++...+.|..++ .++ . . .+
T Consensus 94 SPdG~~LAs~s~dg~V~iwd~~~~l~~l~--~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l 171 (588)
T 2j04_A 94 SPIDDWMAVLSNNGNVSVFKDNKMLTNLD--SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFE 171 (588)
T ss_dssp CSSSSCEEEEETTSCEEEEETTEEEEECC--CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEE
T ss_pred CCCCCEEEEEeCCCcEEEEeCCceeeecc--CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceee
Confidence 45674 66777888888898 44333322 221 133799999996 55556555577777 555 4 1 12
Q ss_pred ee---ecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeE----Eee-ccccccce
Q 023085 67 LS---YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT----LVA-DGFYFANG 138 (287)
Q Consensus 67 ~~---~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~~~-~~~~~~~~ 138 (287)
.. ...+ ....+.++++.++| +..+ ..++.+..++.++++.. .+. ..-.....
T Consensus 172 ~ti~~~~~g-h~~~V~sVawSPdg-Laas------------------s~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 172 SSIRLSDAG-SKDWVTHIVWYEDV-LVAA------------------LSNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EEEECSCTT-CCCCEEEEEEETTE-EEEE------------------ETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred eeeeccccc-ccccEEEEEEcCCc-EEEE------------------eCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 11 1122 23578899999999 4442 23456777776655421 121 22245678
Q ss_pred EEEccCCCEEEEEeCCCCEEEEEEecCC
Q 023085 139 VALSRDEDYVVVCESWKFRCRKYWLKGE 166 (287)
Q Consensus 139 i~~~~~~~~l~v~~~~~~~l~~~~~~~~ 166 (287)
++|+ ++.|..+. .+.|..|+..+.
T Consensus 232 vaFs--g~~LASa~--~~tIkLWd~~~~ 255 (588)
T 2j04_A 232 LKIV--DYKVVLTC--PGYVHKIDLKNY 255 (588)
T ss_dssp EEEE--TTEEEEEC--SSEEEEEETTTT
T ss_pred EEEE--CCEEEEEe--CCeEEEEECCCC
Confidence 8888 56555553 478999997653
No 309
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.71 E-value=0.28 Score=44.00 Aligned_cols=104 Identities=14% Similarity=-0.023 Sum_probs=58.3
Q ss_pred cccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCee--EEeeccccccceE--EEccCCCEEEEE
Q 023085 76 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT--TLVADGFYFANGV--ALSRDEDYVVVC 151 (287)
Q Consensus 76 ~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~i--~~~~~~~~l~v~ 151 (287)
..+.++++.+++.|.. +..++.|..+|..+++. ..+.........+ ++++++..++++
T Consensus 267 ~~v~sv~~s~~~~las------------------gs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS 328 (524)
T 2j04_B 267 SLITTFDFLSPTTVVC------------------GFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVST 328 (524)
T ss_dssp TCEEEEEESSSSEEEE------------------EETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEE
T ss_pred CCEEEEEecCCCeEEE------------------EeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEE
Confidence 3466777776554333 23457888888765431 2222233345566 456776235666
Q ss_pred eCCCCEEEEEEecCCCCcceeEEeccCC-CCCcceeeCCCCCEEEEEec
Q 023085 152 ESWKFRCRKYWLKGERKGKLETFAENLP-GAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 152 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~lwv~~~~ 199 (287)
.+..+.|..||+...+. ...+..... +....+++.+++..++++..
T Consensus 329 ~S~D~tvklWD~~~~~~--~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~ 375 (524)
T 2j04_B 329 VAVDGYFYIFNPKDIAT--TKTTVSRFRGSNLVPVVYCPQIYSYIYSDG 375 (524)
T ss_dssp EETTSEEEEECGGGHHH--HCEEEEECSCCSCCCEEEETTTTEEEEECS
T ss_pred eccCCeEEEEECCCCCc--ccccccccccCcccceEeCCCcCeEEEeCC
Confidence 66678899998754211 111211111 12456888898888776654
No 310
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.66 E-value=0.27 Score=42.28 Aligned_cols=221 Identities=11% Similarity=-0.027 Sum_probs=109.4
Q ss_pred CCCC-cEEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCC-CceEEEc-cCC---cEEEeeecCCc
Q 023085 2 DKNG-VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG---VENFLSYVNGS 73 (287)
Q Consensus 2 d~~G-~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~-~~g---~~~~~~~~~~~ 73 (287)
.++| .|..|+.+|.|..|+ +++........... ...+..++++.++... ..+...+ ... ...+..
T Consensus 156 spdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~--v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~----- 228 (420)
T 4gga_A 156 IKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSAR--VGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSG----- 228 (420)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC--EEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEEC-----
T ss_pred CCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCc--eEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecc-----
Confidence 3556 455667788888888 44332222211111 2233345554444323 3455555 332 222211
Q ss_pred cccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCee-----EEeeccccccceEEEccCCCEE
Q 023085 74 KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT-----TLVADGFYFANGVALSRDEDYV 148 (287)
Q Consensus 74 ~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~l 148 (287)
....+..+...++|...++. ...+.+..++..+++. ............+++.|.+..+
T Consensus 229 h~~~~~~~~~~~~g~~l~s~-----------------~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~ 291 (420)
T 4gga_A 229 HSQEVCGLRWAPDGRHLASG-----------------GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV 291 (420)
T ss_dssp CSSCEEEEEECTTSSEEEEE-----------------ETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTE
T ss_pred cccceeeeeecCCCCeeeee-----------------eccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccE
Confidence 12345567777777766642 2244566666544331 1112222334567888876545
Q ss_pred EEEe--CCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCcccc
Q 023085 149 VVCE--SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFS 226 (287)
Q Consensus 149 ~v~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (287)
+.+. +..+.|..||+.... ....+. .......+++.++++..+++...
T Consensus 292 la~~~gs~D~~I~iwd~~t~~--~~~~~~--~~~~v~~~~~~~~~~~lv~~sg~-------------------------- 341 (420)
T 4gga_A 292 LATGGGTSDRHIRIWNVCSGA--CLSAVD--AHSQVCSILWSPHYKELISGHGF-------------------------- 341 (420)
T ss_dssp EEEEECTTTCEEEEEETTTTE--EEEEEE--CSSCEEEEEEETTTTEEEEEECT--------------------------
T ss_pred EEEEeecCCCEEEEEeCCccc--cceeec--cccceeeeeecCCCCeEEEEEec--------------------------
Confidence 4432 345678888875431 111121 12234556677777655554321
Q ss_pred ccccCCCceEEEEECC-CCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 227 QFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 227 ~~~~~~~~~~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
..+.|..++. .++.+..+.... ..+.++... +|+..++.-.-..|.+.++
T Consensus 342 ------~d~~I~iwd~~~~~~v~~l~gH~----~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 342 ------AQNQLVIWKYPTMAKVAELKGHT----SRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp ------TTCCEEEEETTTCCEEEEECCCS----SCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred ------CCCEEEEEECCCCcEEEEEcCCC----CCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 0245666663 467777775433 246777775 5554444434445655554
No 311
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.63 E-value=0.29 Score=42.15 Aligned_cols=135 Identities=10% Similarity=0.057 Sum_probs=77.2
Q ss_pred CcEEEEecCCeEEEEE--CCceEEEEee--CCccccCeEECCCCcEEEE-eCCCceEEEc-cCC--cEEEeeecCCcccc
Q 023085 5 GVIYTATRDGWIKRLQ--DGTWVNWKFI--DSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG--VENFLSYVNGSKLR 76 (287)
Q Consensus 5 G~l~~~~~~g~i~~~~--~~~~~~~~~~--~~~~~~~i~~d~dg~l~v~-~~~~gi~~~~-~~g--~~~~~~~~~~~~~~ 76 (287)
+.|-+| .++.|+.|+ +|+....... ....+..+++.++|++.++ ...+.|..++ .++ +..+... ..
T Consensus 117 n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h-----~~ 190 (420)
T 4gga_A 117 NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSH-----SA 190 (420)
T ss_dssp SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-----SS
T ss_pred CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCC-----CC
Confidence 334454 578899999 6766554332 2233338999999975544 5445577777 666 3333111 12
Q ss_pred ccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe--eEEeeccccccceEEEccCCCEEEEEeCC
Q 023085 77 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI--TTLVADGFYFANGVALSRDEDYVVVCESW 154 (287)
Q Consensus 77 ~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~l~v~~~~ 154 (287)
.+..+.. ++.+.++ +...+.+..++..... +..+.........+.+.++++.+.... .
T Consensus 191 ~v~~~s~--~~~~l~s-----------------gs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~-~ 250 (420)
T 4gga_A 191 RVGSLSW--NSYILSS-----------------GSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG-N 250 (420)
T ss_dssp CEEEEEE--ETTEEEE-----------------EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE-T
T ss_pred ceEEEee--CCCEEEE-----------------EeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeee-c
Confidence 3344443 4555554 2234567767654322 233333444566788899998665554 4
Q ss_pred CCEEEEEEecC
Q 023085 155 KFRCRKYWLKG 165 (287)
Q Consensus 155 ~~~l~~~~~~~ 165 (287)
.+.+..++...
T Consensus 251 D~~v~i~~~~~ 261 (420)
T 4gga_A 251 DNLVNVWPSAP 261 (420)
T ss_dssp TSCEEEEESSC
T ss_pred cccceEEeecc
Confidence 56788888754
No 312
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.49 E-value=0.071 Score=48.48 Aligned_cols=118 Identities=16% Similarity=0.189 Sum_probs=70.6
Q ss_pred cccceEEEccCCCEEEEEeCCC---------------------CEEEEEEecCCCCc----ceeEEecc-----------
Q 023085 134 YFANGVALSRDEDYVVVCESWK---------------------FRCRKYWLKGERKG----KLETFAEN----------- 177 (287)
Q Consensus 134 ~~~~~i~~~~~~~~l~v~~~~~---------------------~~l~~~~~~~~~~~----~~~~~~~~----------- 177 (287)
..|.++.++|....+|++.+.+ +.|+++..+..... +...+...
T Consensus 384 ~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~~ 463 (592)
T 3zwu_A 384 DRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPK 463 (592)
T ss_dssp ECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGG
T ss_pred eccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccccc
Confidence 3468899998655699987632 46999987633211 11222100
Q ss_pred ----------CCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcE
Q 023085 178 ----------LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTI 246 (287)
Q Consensus 178 ----------~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~ 246 (287)
.-..|+||++|++|+|||++-......-.+ .......+..+++. |+.
T Consensus 464 ~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~----------------------~~~gnn~~~~~~~~~g~~ 521 (592)
T 3zwu_A 464 GGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDF----------------------AGMGNNQMLCADPATGEI 521 (592)
T ss_dssp GCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGG----------------------TTTCSCEEEEECTTTCCE
T ss_pred ccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccc----------------------cccccceEEEEeCCCCeE
Confidence 113589999999999999997632110000 01123456667776 556
Q ss_pred EEEEECCCCccccceEEEEEe--CCEEEEEec
Q 023085 247 IRNLVDPTGQLMSFVTSGLQV--DNHLYVISL 276 (287)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~ 276 (287)
...+..|.+ ..++++++. +.+||+.-.
T Consensus 522 ~rf~~~P~g---aE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 522 RRFMVGPIG---CEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEEECCTT---CEEEEEEECTTSSEEEEEEE
T ss_pred EEEEeCCCC---ccCcCeeECCCCCEEEEEEE
Confidence 666666654 467777775 467888744
No 313
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.26 E-value=0.43 Score=40.12 Aligned_cols=48 Identities=10% Similarity=0.075 Sum_probs=28.4
Q ss_pred EEEECCC-CcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 237 LIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 237 v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
|..+|.+ ++.+..+.. +.....+.++... ++++.++.-....|.++++
T Consensus 220 v~iwd~~~~~~~~~~~~--g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRR--GLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp EEEEETTTCCEEEEEEC--TTCCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred EEEEECCCCcEEEEEEc--CCCCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 5666654 667777662 1012356777775 5665555556677877776
No 314
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.02 E-value=0.51 Score=38.81 Aligned_cols=173 Identities=10% Similarity=0.052 Sum_probs=85.6
Q ss_pred cEEEEecCCeEEEEE--CCceEEEEe---eCCccccCeEECCC--CcEEEE-eCCCceEEEc-cCC-cEEEeeecCCccc
Q 023085 6 VIYTATRDGWIKRLQ--DGTWVNWKF---IDSQTLVGLTSTKE--GHLIIC-DNANGLHKVS-EDG-VENFLSYVNGSKL 75 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~~~~~~---~~~~~~~~i~~d~d--g~l~v~-~~~~gi~~~~-~~g-~~~~~~~~~~~~~ 75 (287)
.|..++.++.|..|+ ++....... ...... .+++.++ |.+.++ ...+.|..++ ..+ .........+ ..
T Consensus 73 ~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~-~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~-h~ 150 (316)
T 3bg1_A 73 ILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVN-SVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNA-HT 150 (316)
T ss_dssp CEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCC-EEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTS-SS
T ss_pred EEEEEECCCEEEEEECCCCcceEEEEccCCCCceE-EEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeecc-cc
Confidence 466667888888888 443322221 222334 7888887 655444 3334455555 333 2221111111 11
Q ss_pred cccceEEEcCCC-----------------cEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCC-ee---EEeecccc
Q 023085 76 RFANDVVEASDG-----------------SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-IT---TLVADGFY 134 (287)
Q Consensus 76 ~~~~~l~~d~~g-----------------~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~---~~~~~~~~ 134 (287)
..+..++..+++ .++++ +..++.|..+|..++ .. ..+.....
T Consensus 151 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-----------------gs~D~~v~lWd~~~~~~~~~~~~l~~h~~ 213 (316)
T 3bg1_A 151 IGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFAS-----------------GGCDNLIKLWKEEEDGQWKEEQKLEAHSD 213 (316)
T ss_dssp SCBCCCEECCCCCC------CCSCCCCCCCBEEC-----------------CBTTSBCCEEEECTTSCEEEEECCBCCSS
T ss_pred CCcceEEEccccCCccccccccccCccccceEEE-----------------ecCCCeEEEEEeCCCCccceeeecccCCC
Confidence 234556666542 22332 223344444443322 11 22222234
Q ss_pred ccceEEEccCC----CEEEEEeCCCCEEEEEEecCCCCc--ceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 135 FANGVALSRDE----DYVVVCESWKFRCRKYWLKGERKG--KLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 135 ~~~~i~~~~~~----~~l~v~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
....++|+|++ + ++++.+..+.|..|+.+..... ....+. ........+++.++|++.++...
T Consensus 214 ~V~~v~~sp~~~~~~~-~las~s~D~~v~iw~~~~~~~~~~~~~~~~-~~~~~v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 214 WVRDVAWAPSIGLPTS-TIASCSQDGRVFIWTCDDASSNTWSPKLLH-KFNDVVWHVSWSITANILAVSGG 282 (316)
T ss_dssp CEEEEECCCCSSCSCC-EEEEEETTCEEEEEECSSTTCCCCBCCEEE-ECSSCEEEEEECTTTCCEEEEES
T ss_pred ceEEEEecCCCCCCCc-eEEEEcCCCeEEEEEccCccccchhhhhhh-cCCCcEEEEEEcCCCCEEEEEcC
Confidence 45778899986 4 4455556778989987642111 111111 12234567888888876555543
No 315
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.48 E-value=0.79 Score=37.06 Aligned_cols=223 Identities=11% Similarity=-0.022 Sum_probs=105.4
Q ss_pred CCCc-EEEEecCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCCCc-eEEEc-cCCcEEEeeecCCccccc
Q 023085 3 KNGV-IYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDGVENFLSYVNGSKLRF 77 (287)
Q Consensus 3 ~~G~-l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~g-i~~~~-~~g~~~~~~~~~~~~~~~ 77 (287)
++|. |..|+.+|.|..|+ +++.......... . ......++++.++....+ +...+ ..+...+.... .....
T Consensus 77 ~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~-~-~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 152 (318)
T 4ggc_A 77 KEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSA-R-VGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLS--GHSQE 152 (318)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-C-EEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE--CCSSC
T ss_pred CCCCEEEEEECCCcEEEeecCCceeEEEecCccc-e-EEEeecCCCEEEEEecCCceEeeecCCCceeEEEEc--CccCc
Confidence 4553 55666788888888 4443322222111 1 223344455444433334 33333 33311111111 01234
Q ss_pred cceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEE-----eeccccccceEEEccCCCEE-EEE
Q 023085 78 ANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-----VADGFYFANGVALSRDEDYV-VVC 151 (287)
Q Consensus 78 ~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~~~l-~v~ 151 (287)
+..+...+++.+.++. ...+.|..+|..+++... ..........+++.+++..+ +++
T Consensus 153 ~~~~~~~~~~~~l~s~-----------------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 215 (318)
T 4ggc_A 153 VCGLRWAPDGRHLASG-----------------GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATG 215 (318)
T ss_dssp EEEEEECTTSSEEEEE-----------------ETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEE
T ss_pred eEEEEEcCCCCEEEEE-----------------ecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEE
Confidence 5567777778766642 234567777765543211 11112233456667765444 333
Q ss_pred e-CCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCcccccccc
Q 023085 152 E-SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFIT 230 (287)
Q Consensus 152 ~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
. ...+.|..++..... ..... ........+.+.+++...++....
T Consensus 216 ~~~~~~~i~lwd~~~~~--~~~~~--~~~~~v~~~~~~~~~~~~~~~sg~------------------------------ 261 (318)
T 4ggc_A 216 GGTSDRHIRIWNVCSGA--CLSAV--DAHSQVCSILWSPHYKELISGHGF------------------------------ 261 (318)
T ss_dssp ECTTTCEEEEEETTTCC--EEEEE--ECSSCEEEEEEETTTTEEEEEECT------------------------------
T ss_pred ecCCCCEEEEEeccccc--ccccc--cceeeeeeeeecccccceEEEEEc------------------------------
Confidence 3 334567677754321 11111 111224456666666544433220
Q ss_pred CCCceEEEEECC-CCcEEEEEECCCCccccceEEEEEe-CCEEEEEecCCCeEEEEeC
Q 023085 231 LGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 286 (287)
Q Consensus 231 ~~~~~~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 286 (287)
..+.|..++. .++.+..+.... ..+.++... ++++.++.-.-..|.+.|+
T Consensus 262 --~d~~i~iwd~~~~~~~~~l~gH~----~~V~~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 262 --AQNQLVIWKYPTMAKVAELKGHT----SRVLSLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp --TTCCEEEEETTTCCEEEEECCCS----SCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred --CCCEEEEEECCCCcEEEEEcCCC----CCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 1245666764 477777776433 357777775 5555454444456666654
No 316
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.46 E-value=0.72 Score=42.49 Aligned_cols=64 Identities=9% Similarity=0.121 Sum_probs=38.5
Q ss_pred CCCcEEEEe--cCCeEEEEE--CCceEEEEeeCC-ccccCeEECCCCcEEEEeCC-------CceEEEc-cCC-cEEE
Q 023085 3 KNGVIYTAT--RDGWIKRLQ--DGTWVNWKFIDS-QTLVGLTSTKEGHLIICDNA-------NGLHKVS-EDG-VENF 66 (287)
Q Consensus 3 ~~G~l~~~~--~~g~i~~~~--~~~~~~~~~~~~-~~~~~i~~d~dg~l~v~~~~-------~gi~~~~-~~g-~~~~ 66 (287)
.+|.||+.- ....+.+|| +++++.....+. .-.+..+..++|+||+.... ..+.++| .++ ++.+
T Consensus 252 ~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 252 GNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp TTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred CCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 467888764 234688898 566655432221 11214556679999988531 2478888 556 6665
No 317
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=95.39 E-value=1.9 Score=40.79 Aligned_cols=139 Identities=9% Similarity=0.047 Sum_probs=73.0
Q ss_pred CCcEEEEecCCeEEEEE-CC-ceEEEEeeC------CccccCeEECCC--CcEEEEeCC------CceEEEccCC--cEE
Q 023085 4 NGVIYTATRDGWIKRLQ-DG-TWVNWKFID------SQTLVGLTSTKE--GHLIICDNA------NGLHKVSEDG--VEN 65 (287)
Q Consensus 4 ~G~l~~~~~~g~i~~~~-~~-~~~~~~~~~------~~~~~~i~~d~d--g~l~v~~~~------~gi~~~~~~g--~~~ 65 (287)
.+.+|+++..++|++-. .| .++...... ......|++++. +.+|++... .+|++-...| ++.
T Consensus 27 ~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~ 106 (789)
T 1sqj_A 27 KDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTI 106 (789)
T ss_dssp TTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEE
T ss_pred CCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCccee
Confidence 46899999889999988 44 344332211 112327888874 478998633 3566554445 555
Q ss_pred EeeecC-C--cc-ccccceEEEcCC--CcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeecc------c
Q 023085 66 FLSYVN-G--SK-LRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG------F 133 (287)
Q Consensus 66 ~~~~~~-~--~~-~~~~~~l~~d~~--g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~------~ 133 (287)
+..... + .+ ...+..+++++. +.+|+.. ..+.|++-+-....++.+... .
T Consensus 107 ~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~------------------~~~gl~~S~DgG~TW~~~~~~~~~~~~~ 168 (789)
T 1sqj_A 107 YESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT------------------RTEGIWKSSDRAKTWTNVTSIPDAFTNG 168 (789)
T ss_dssp EECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC------------------SSSCEEEESSTTSSCEEETTSCCCCSTT
T ss_pred ccCCcccCccCCCccceeEEEEcCCCCCEEEEEe------------------ccCCEEEECCCCcccCCCccCccccCCC
Confidence 532111 0 01 112456888763 4677742 234566654332234443211 0
Q ss_pred cccceEEEccC-CCEEEEEeCCCCEEEE
Q 023085 134 YFANGVALSRD-EDYVVVCESWKFRCRK 160 (287)
Q Consensus 134 ~~~~~i~~~~~-~~~l~v~~~~~~~l~~ 160 (287)
.....++++|. .+.+|++......|++
T Consensus 169 ~~~~~i~~~p~~~~~~~~~~~~~~~v~~ 196 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYASATAPQGMYV 196 (789)
T ss_dssp TCEEEEEECTTSTTCEEEEESSTTCEEE
T ss_pred CCeEEEEECCCCCCEEEEEEcCCCeEEE
Confidence 12234566763 4568887653244554
No 318
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.28 E-value=0.016 Score=49.53 Aligned_cols=129 Identities=11% Similarity=-0.045 Sum_probs=48.0
Q ss_pred CCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCC
Q 023085 112 PHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDG 191 (287)
Q Consensus 112 ~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G 191 (287)
..+.|+.+|.++|+....... .......+..+++ +|+..+..+.|+.+|.++++......+.... ......++..++
T Consensus 17 ~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~-~~~~sp~~~~~~ 93 (369)
T 2hz6_A 17 LDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE-LVQASPCRSSDG 93 (369)
T ss_dssp TTSEEEEEETTTCCEEEEEEC-CCSCCCC-----C-CEEECTTTCCEEEC-----CCSEECSCCHHH-HHTTCSCC----
T ss_pred CCCEEEEEECCCCCEEEEecC-CCceecceEcCCC-EEEEeCCCCEEEEEECCCCceeeeeeccCcc-ccccCceEecCC
Confidence 346799999888876543322 2222222334554 6676566778999997543211110010000 000111222356
Q ss_pred CEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEECCCCccccceEEEEEeCCE
Q 023085 192 TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQVDNH 270 (287)
Q Consensus 192 ~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~ 270 (287)
.|++++.. +.|+.+|++ |+.++.+..... ...+.+++.
T Consensus 94 ~v~~g~~d-----------------------------------g~v~a~D~~tG~~~w~~~~~~~------~~~~p~~~~ 132 (369)
T 2hz6_A 94 ILYMGKKQ-----------------------------------DIWYVIDLLTGEKQQTLSSAFA------DSLSPSTSL 132 (369)
T ss_dssp -CCCCEEE-----------------------------------EEEEEECCC----------------------------
T ss_pred EEEEEeCC-----------------------------------CEEEEEECCCCcEEEEecCCCc------ccccccCCE
Confidence 78777654 578888875 777777654321 112225667
Q ss_pred EEEEecCCCeEEEEe
Q 023085 271 LYVISLTSNFIGKVQ 285 (287)
Q Consensus 271 l~i~~~~~~~i~~~~ 285 (287)
||+++.. ..|..+|
T Consensus 133 v~~~~~d-g~v~a~d 146 (369)
T 2hz6_A 133 LYLGRTE-YTITMYD 146 (369)
T ss_dssp EEEEEEE-EEEECCC
T ss_pred EEEEecC-CEEEEEE
Confidence 7776532 3344443
No 319
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=94.29 E-value=2.4 Score=36.74 Aligned_cols=109 Identities=10% Similarity=0.057 Sum_probs=61.0
Q ss_pred CeEECCC-CcEEEE-eCCCceEEEc-cCCcEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCC
Q 023085 37 GLTSTKE-GHLIIC-DNANGLHKVS-EDGVENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPH 113 (287)
Q Consensus 37 ~i~~d~d-g~l~v~-~~~~gi~~~~-~~g~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~ 113 (287)
.+++.++ ++++++ ...+.|..+| +++....... + ....+.+++++++|..+++ +..+
T Consensus 154 ~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~--~-~~~~v~~v~wspdg~~las-----------------gs~d 213 (434)
T 2oit_A 154 DMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL--P-STVAVTSVCWSPKGKQLAV-----------------GKQN 213 (434)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE--C-GGGCEEEEEECTTSSCEEE-----------------EETT
T ss_pred EEEECCCCCCEEEEEECCCeEEEEEcCCCcceeecc--C-CCCceeEEEEcCCCCEEEE-----------------EcCC
Confidence 7889987 666554 4445577777 6661111111 1 1246788999999976654 2235
Q ss_pred ceEEEEeCCCCeeEEeeccc-------cccceEEEccCCCEEEEEeCCC------CEEEEEEecC
Q 023085 114 GQLLKYDPSSNITTLVADGF-------YFANGVALSRDEDYVVVCESWK------FRCRKYWLKG 165 (287)
Q Consensus 114 ~~v~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~l~v~~~~~------~~l~~~~~~~ 165 (287)
+.|..+|.+......+.... .....+.+++++..+....... ..+..+++..
T Consensus 214 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 214 GTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp SCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred CcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 67888888722232222211 1345677888775444444332 2366777653
No 320
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=94.16 E-value=3.7 Score=38.38 Aligned_cols=89 Identities=13% Similarity=0.209 Sum_probs=51.0
Q ss_pred CCcEEEEecCCeEEEEE-CC-ceEEEEeeCC------ccccCeEECCC--CcEEEEeC---------CCceEEEccCC--
Q 023085 4 NGVIYTATRDGWIKRLQ-DG-TWVNWKFIDS------QTLVGLTSTKE--GHLIICDN---------ANGLHKVSEDG-- 62 (287)
Q Consensus 4 ~G~l~~~~~~g~i~~~~-~~-~~~~~~~~~~------~~~~~i~~d~d--g~l~v~~~---------~~gi~~~~~~g-- 62 (287)
.+.||+++..|+|+|.+ .| .++.+..... .....|++|+. +++|++.. ..+|++-...|
T Consensus 35 ~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~T 114 (737)
T 2cn3_A 35 KDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGET 114 (737)
T ss_dssp TTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSS
T ss_pred CCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCC
Confidence 37899999888999998 34 4444322111 12337888873 48999863 13566655445
Q ss_pred cEEEeeecC-Cc--c-ccccceEEEcCC--CcEEEE
Q 023085 63 VENFLSYVN-GS--K-LRFANDVVEASD--GSLYFT 92 (287)
Q Consensus 63 ~~~~~~~~~-~~--~-~~~~~~l~~d~~--g~l~v~ 92 (287)
++.+..... +. + ......|++++. +.+|+.
T Consensus 115 W~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g 150 (737)
T 2cn3_A 115 WEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLG 150 (737)
T ss_dssp CEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEE
T ss_pred cccCCCCcccCCCcCcccccceEEECCCCCCEEEEe
Confidence 666542111 00 0 012357888864 567775
No 321
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.13 E-value=3.3 Score=38.78 Aligned_cols=105 Identities=14% Similarity=0.050 Sum_probs=56.4
Q ss_pred cceEEEc-CCCc-EEEE-cCCCCCCCcceeeeeeccCCCceEEEEeCCCC-eeEEeecccc-ccceEEEccCCCEEEEEe
Q 023085 78 ANDVVEA-SDGS-LYFT-VSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-ITTLVADGFY-FANGVALSRDEDYVVVCE 152 (287)
Q Consensus 78 ~~~l~~d-~~g~-l~v~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~-~~~~i~~~~~~~~l~v~~ 152 (287)
.....++ +||+ |.++ +.. +.....|+.+|..++ +.. ...+. ...+++|+||++.|+++.
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~--------------G~~~~~l~v~dl~~g~~~l--~~~~~~~~~~~~WspDg~~l~y~~ 239 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMS--------------GNEVYTIEFKRISDPSQTI--ADKVSGTNGEIVWGPDHTSLFYVT 239 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESS--------------SSSCEEEEEEETTCTTCCC--CCCEEEECSCCEECSSTTEEEEEE
T ss_pred EeeeEecCCCCCEEEEEEeCC--------------CCceEEEEEEECCCCCEeC--CccccCceeeEEEecCCCEEEEEE
Confidence 4567888 8986 3332 211 112246999998877 521 11111 135688999998777765
Q ss_pred CCC----CEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCC-EEEEEe
Q 023085 153 SWK----FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAII 198 (287)
Q Consensus 153 ~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-lwv~~~ 198 (287)
... ..|+++++.++.......+.........++.+.+||+ |.+...
T Consensus 240 ~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~ 290 (751)
T 2xe4_A 240 KDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQ 290 (751)
T ss_dssp ECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEE
T ss_pred ECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEec
Confidence 422 3688888754322212222211111223456778886 444443
No 322
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=93.60 E-value=2.3 Score=34.16 Aligned_cols=136 Identities=10% Similarity=0.032 Sum_probs=72.1
Q ss_pred CCcEEEEecCCeEEEEE--CCceEEEEee--CCccccCeEECCCCcEEEEeCC-CceEEEc-cCC--cEEEeeecCCccc
Q 023085 4 NGVIYTATRDGWIKRLQ--DGTWVNWKFI--DSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VENFLSYVNGSKL 75 (287)
Q Consensus 4 ~G~l~~~~~~g~i~~~~--~~~~~~~~~~--~~~~~~~i~~d~dg~l~v~~~~-~gi~~~~-~~g--~~~~~~~~~~~~~ 75 (287)
++.|-+| .++.|..|+ +++....... ....+..+++.++|++.++... +.|...+ +++ +..+... .
T Consensus 36 ~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h-~---- 109 (318)
T 4ggc_A 36 GNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSH-S---- 109 (318)
T ss_dssp TSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC-S----
T ss_pred CCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCc-c----
Confidence 3434344 577899999 6665544332 1222337899999986655434 4466667 666 3333211 1
Q ss_pred cccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe--eEEeeccccccceEEEccCCCEEEEEeC
Q 023085 76 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI--TTLVADGFYFANGVALSRDEDYVVVCES 153 (287)
Q Consensus 76 ~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~l~v~~~ 153 (287)
..+. ....++.+.++. ...+.+..++..... +............+.+.++++.+..+.
T Consensus 110 ~~~~--~~~~~~~~l~s~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~- 169 (318)
T 4ggc_A 110 ARVG--SLSWNSYILSSG-----------------SRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG- 169 (318)
T ss_dssp SCEE--EEEEETTEEEEE-----------------ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE-
T ss_pred ceEE--EeecCCCEEEEE-----------------ecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEe-
Confidence 1222 233345555431 123444445443222 222233334456677888888665554
Q ss_pred CCCEEEEEEecC
Q 023085 154 WKFRCRKYWLKG 165 (287)
Q Consensus 154 ~~~~l~~~~~~~ 165 (287)
..+.|..||+..
T Consensus 170 ~d~~i~iwd~~~ 181 (318)
T 4ggc_A 170 NDNLVNVWPSAP 181 (318)
T ss_dssp TTSCEEEEESSC
T ss_pred cCcceeEEECCC
Confidence 457788898764
No 323
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.18 E-value=0.44 Score=40.14 Aligned_cols=110 Identities=9% Similarity=0.076 Sum_probs=58.8
Q ss_pred CCCcEEEEecCCeEEEEE--CCceEEEEeeC-CccccC---eEECCCCcEEEEe--CCCceEEEc-cCCcEEEeeecCCc
Q 023085 3 KNGVIYTATRDGWIKRLQ--DGTWVNWKFID-SQTLVG---LTSTKEGHLIICD--NANGLHKVS-EDGVENFLSYVNGS 73 (287)
Q Consensus 3 ~~G~l~~~~~~g~i~~~~--~~~~~~~~~~~-~~~~~~---i~~d~dg~l~v~~--~~~gi~~~~-~~g~~~~~~~~~~~ 73 (287)
.+|.+|+++.+|.|+.++ +|+........ ..|... -+...++.+|+.. ..+.|+.++ .+|...+.......
T Consensus 9 ~~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 9 LSDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred eCCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 357899999999999999 67654433332 011101 0011245677664 234578888 56633332221111
Q ss_pred cccccce----EEE------cCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee
Q 023085 74 KLRFAND----VVE------ASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA 130 (287)
Q Consensus 74 ~~~~~~~----l~~------d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 130 (287)
-..+|.. .++ ..+|.+|+. ...+.++.+|..+|+.....
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~G------------------s~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTG------------------SMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEEC------------------EEEEEEEEEETTTCCEEEEE
T ss_pred eeccccccCCCceeecccccccCCEEEEE------------------ecCCEEEEEECCCCcEEEEE
Confidence 0111111 112 146778883 34578999999888876543
No 324
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=92.25 E-value=4.7 Score=34.05 Aligned_cols=38 Identities=5% Similarity=-0.136 Sum_probs=23.9
Q ss_pred CCceEEEEeCCCCeeEE-eecc---ccccceEEEccCCCEEE
Q 023085 112 PHGQLLKYDPSSNITTL-VADG---FYFANGVALSRDEDYVV 149 (287)
Q Consensus 112 ~~~~v~~~~~~~~~~~~-~~~~---~~~~~~i~~~~~~~~l~ 149 (287)
.++.|..+|.++++... +... ......++|+|+++.+.
T Consensus 201 ~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lv 242 (356)
T 2w18_A 201 IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFI 242 (356)
T ss_dssp TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEE
T ss_pred CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEE
Confidence 46788889998887543 3221 22334567999987554
No 325
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.01 E-value=4.2 Score=32.98 Aligned_cols=230 Identities=10% Similarity=0.039 Sum_probs=112.3
Q ss_pred CcEEE-Ee--cCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeC-----CCceEEEc-cCC-cEEEeeecCC
Q 023085 5 GVIYT-AT--RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDN-----ANGLHKVS-EDG-VENFLSYVNG 72 (287)
Q Consensus 5 G~l~~-~~--~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~-----~~gi~~~~-~~g-~~~~~~~~~~ 72 (287)
+.||+ |- ....+.+|+ ++++......+......-+..-+++||+... ...+++++ .++ ++.+....
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p-- 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP-- 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS--
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC--
Confidence 44554 32 235788899 5666655432221110112223678887742 13588899 566 66664321
Q ss_pred ccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccc--cccceEEEccCCCEEEE
Q 023085 73 SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF--YFANGVALSRDEDYVVV 150 (287)
Q Consensus 73 ~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~l~v 150 (287)
.+... ..++. -++.||+..... ........++++|+.+++++.+.... ......+. .++ .||+
T Consensus 90 ~~r~~-~~~~~-~~~~iyv~GG~~-----------~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv 154 (306)
T 3ii7_A 90 TPRDS-LAACA-AEGKIYTSGGSE-----------VGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANG-LIYV 154 (306)
T ss_dssp SCCBS-CEEEE-ETTEEEEECCBB-----------TTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETT-EEEE
T ss_pred ccccc-eeEEE-ECCEEEEECCCC-----------CCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECC-EEEE
Confidence 11112 22222 267888852110 00112346999999988887764321 11122332 234 4777
Q ss_pred EeCC---------CCEEEEEEecCCCCcceeEEeccCCCCC-cceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHh
Q 023085 151 CESW---------KFRCRKYWLKGERKGKLETFAENLPGAP-DNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAA 220 (287)
Q Consensus 151 ~~~~---------~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (287)
..-. .+.+++||+...+ ............ ..++. -+++||+......
T Consensus 155 ~GG~~~~~~~~~~~~~~~~yd~~~~~---W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~------------------- 211 (306)
T 3ii7_A 155 CGGSLGNNVSGRVLNSCEVYDPATET---WTELCPMIEARKNHGLVF-VKDKIFAVGGQNG------------------- 211 (306)
T ss_dssp ECCEESCTTTCEECCCEEEEETTTTE---EEEECCCSSCCBSCEEEE-ETTEEEEECCEET-------------------
T ss_pred ECCCCCCCCcccccceEEEeCCCCCe---EEECCCccchhhcceEEE-ECCEEEEEeCCCC-------------------
Confidence 6421 3458888875432 222211111111 12222 2667888764310
Q ss_pred CCccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEe-c----CCCeEEEEeC
Q 023085 221 YPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVIS-L----TSNFIGKVQL 286 (287)
Q Consensus 221 ~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~-~----~~~~i~~~~~ 286 (287)
......+.+||++.+.-..+..... ......++..+++||+-+ . ..+.|.+||+
T Consensus 212 ----------~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~ 270 (306)
T 3ii7_A 212 ----------LGGLDNVEYYDIKLNEWKMVSPMPW--KGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNT 270 (306)
T ss_dssp ----------TEEBCCEEEEETTTTEEEECCCCSC--CBSCCEEEEETTEEEEEECBCSSSBCCEEEEEET
T ss_pred ----------CCCCceEEEeeCCCCcEEECCCCCC--CccceeEEEECCEEEEEeCcCCCeeeeeEEEEcC
Confidence 0002367889988766555432111 112233444578888754 2 2246777775
No 326
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.72 E-value=5.1 Score=33.33 Aligned_cols=85 Identities=15% Similarity=0.211 Sum_probs=44.0
Q ss_pred CCcEEEEe--cCCeEEEEE-C---CceEEEEeeCCcc--ccCeEECCCCcEEEEeCC-----------CceEEEc-cCC-
Q 023085 4 NGVIYTAT--RDGWIKRLQ-D---GTWVNWKFIDSQT--LVGLTSTKEGHLIICDNA-----------NGLHKVS-EDG- 62 (287)
Q Consensus 4 ~G~l~~~~--~~g~i~~~~-~---~~~~~~~~~~~~~--~~~i~~d~dg~l~v~~~~-----------~gi~~~~-~~g- 62 (287)
++.||+.- ....+++|+ . .++......+..+ .++.+. -+++||+.... ..++++| .+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 46677653 345788998 3 5555544333112 112222 36788886321 2478888 556
Q ss_pred cEEEeeecCCccccccceEEEcCCCcEEEE
Q 023085 63 VENFLSYVNGSKLRFANDVVEASDGSLYFT 92 (287)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~ 92 (287)
++.+.... ..+ ..-..+++ -++.||+.
T Consensus 98 W~~~~~~~-p~~-r~~~~~~~-~~~~iyv~ 124 (357)
T 2uvk_A 98 WVKLMSHA-PMG-MAGHVTFV-HNGKAYVT 124 (357)
T ss_dssp EEECSCCC-SSC-CSSEEEEE-ETTEEEEE
T ss_pred EEECCCCC-Ccc-cccceEEE-ECCEEEEE
Confidence 66654321 011 12122333 57889885
No 327
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.27 E-value=9.2 Score=35.45 Aligned_cols=146 Identities=10% Similarity=0.074 Sum_probs=80.7
Q ss_pred CCcEEEEec-----CCeEEEEE--CCceEEEE-e------eCCccccCeEECC-CCcEEEEeCC-------CceEEEc-c
Q 023085 4 NGVIYTATR-----DGWIKRLQ--DGTWVNWK-F------IDSQTLVGLTSTK-EGHLIICDNA-------NGLHKVS-E 60 (287)
Q Consensus 4 ~G~l~~~~~-----~g~i~~~~--~~~~~~~~-~------~~~~~~~~i~~d~-dg~l~v~~~~-------~gi~~~~-~ 60 (287)
++.||+... -..+++|+ ++++.... . +.....+..+... +|+||+.... ..++++| .
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 456665431 23588888 67777766 2 1111121344444 7889887321 2478898 5
Q ss_pred CC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeecc--cc---
Q 023085 61 DG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FY--- 134 (287)
Q Consensus 61 ~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~--- 134 (287)
+. ++.+.... . ...-.+.++-.++.||+.... .....+++||+.++.++.+... ..
T Consensus 477 t~~W~~~~~~p--~-~R~~h~~~~~~~~~iyv~GG~---------------~~~~~v~~yd~~t~~W~~~~~~g~~p~~r 538 (695)
T 2zwa_A 477 TREWSMIKSLS--H-TRFRHSACSLPDGNVLILGGV---------------TEGPAMLLYNVTEEIFKDVTPKDEFFQNS 538 (695)
T ss_dssp TTEEEECCCCS--B-CCBSCEEEECTTSCEEEECCB---------------CSSCSEEEEETTTTEEEECCCSSGGGGSC
T ss_pred CCcEEECCCCC--C-CcccceEEEEcCCEEEEECCC---------------CCCCCEEEEECCCCceEEccCCCCCCCcc
Confidence 55 66653221 1 122233444347899995211 0111699999998888876532 11
Q ss_pred ccce-EEEccCCCEEEEEeCC-------CCEEEEEEecCCC
Q 023085 135 FANG-VALSRDEDYVVVCESW-------KFRCRKYWLKGER 167 (287)
Q Consensus 135 ~~~~-i~~~~~~~~l~v~~~~-------~~~l~~~~~~~~~ 167 (287)
.... ++++.+.+.||+..-. .+.+++||+...+
T Consensus 539 ~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 539 LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 1123 4555553458877522 2469999987543
No 328
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=89.84 E-value=8.2 Score=32.56 Aligned_cols=183 Identities=10% Similarity=-0.030 Sum_probs=85.4
Q ss_pred CCcEEEEe---cCCeEEEEE---CCceEEE-EeeCCccccCeEECC---CCcEEEEeCC-CceEEEc-cCC--cEEEeee
Q 023085 4 NGVIYTAT---RDGWIKRLQ---DGTWVNW-KFIDSQTLVGLTSTK---EGHLIICDNA-NGLHKVS-EDG--VENFLSY 69 (287)
Q Consensus 4 ~G~l~~~~---~~g~i~~~~---~~~~~~~-~~~~~~~~~~i~~d~---dg~l~v~~~~-~gi~~~~-~~g--~~~~~~~ 69 (287)
+|++..++ .++.|..++ +|+...- ........ .+++.+ ++.+.++... +-|...| .+| +..+...
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~-~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~ 222 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEET-ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHID 222 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSC-EEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCcee-eEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCC
Confidence 35555553 366676666 4544221 11122222 445554 6778877444 4466667 667 4555321
Q ss_pred cCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeec----cccccceEEEccCC
Q 023085 70 VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD----GFYFANGVALSRDE 145 (287)
Q Consensus 70 ~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~ 145 (287)
......+..+++.++|.+.++..... ..| .+..+...+.+..+++.+++...... ......-+..+..+
T Consensus 223 --~~~v~~v~~vafSpdG~~lvs~s~~~---~~w--~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg 295 (356)
T 2w18_A 223 --DSYQASVCHKAYSEMGLLFIVLSHPC---AKE--SESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKD 295 (356)
T ss_dssp --C---CCCEEEEEEETTEEEEEEC-----------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEET
T ss_pred --CcceeeeEEEEECCCCCEEEEeccCC---Ccc--eeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCC
Confidence 11123566678889998776532100 001 01112344567778888776433210 00000111112223
Q ss_pred CEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCc-ceeeCCCCCEEEEEe
Q 023085 146 DYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPD-NINLAPDGTFWIAII 198 (287)
Q Consensus 146 ~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~d~~G~lwv~~~ 198 (287)
. +.++.+..+.|..+|+..++. ...+.... ..+. .+++.++|++.++..
T Consensus 296 ~-~lASgS~DgTIkIWDl~tGk~--l~tL~gH~-~~vvs~vafSPDG~~LaSGS 345 (356)
T 2w18_A 296 H-CAAAILTSGTIAIWDLLLGQC--TALLPPVS-DQHWSFVKWSGTDSHLLAGQ 345 (356)
T ss_dssp T-EEEEEETTSCEEEEETTTCSE--EEEECCC---CCCCEEEECSSSSEEEEEC
T ss_pred C-EEEEEcCCCcEEEEECCCCcE--EEEecCCC-CCeEEEEEECCCCCEEEEEE
Confidence 3 444544567888999764321 12221111 1123 378899998665554
No 329
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=89.44 E-value=14 Score=34.66 Aligned_cols=138 Identities=12% Similarity=0.031 Sum_probs=70.9
Q ss_pred CcEEEEecCCeEEEEE-CC-ceEEEEeeC-----------CccccCeEECC--CCcEEEEeC-------CCceEEEccCC
Q 023085 5 GVIYTATRDGWIKRLQ-DG-TWVNWKFID-----------SQTLVGLTSTK--EGHLIICDN-------ANGLHKVSEDG 62 (287)
Q Consensus 5 G~l~~~~~~g~i~~~~-~~-~~~~~~~~~-----------~~~~~~i~~d~--dg~l~v~~~-------~~gi~~~~~~g 62 (287)
..+|+++..|+|++-. .| .++...... ......+++++ .+.+|++.. ..+|++-...|
T Consensus 34 ~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG 113 (763)
T 3a0f_A 34 DLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRG 113 (763)
T ss_dssp TCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTT
T ss_pred CEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCC
Confidence 5799999888999988 34 334332211 11122677887 358999864 24566654445
Q ss_pred --cEEEeeecC-C-c-c-ccccceEEEcC--CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccc-
Q 023085 63 --VENFLSYVN-G-S-K-LRFANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF- 133 (287)
Q Consensus 63 --~~~~~~~~~-~-~-~-~~~~~~l~~d~--~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~- 133 (287)
++.+..... + . + ......|++++ .+.+|+.. ..+.|++-+-....++.+....
T Consensus 114 ~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~------------------~~~~l~~S~DgG~TW~~~~~~~~ 175 (763)
T 3a0f_A 114 KTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGS------------------RTQGLWRSTDRAQTWSRMNQLPD 175 (763)
T ss_dssp SSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEEC------------------SSSCEEEESSTTSSCEECTTSCC
T ss_pred CCceeccCCcccCccccCccccceEEECCCCCCEEEEEe------------------CCCcEEEECCCCcCccccccCcc
Confidence 666542110 0 0 0 01113578875 36788842 2245665543322344332110
Q ss_pred -----cccceEEEccC-CCEEEEEeCCCCEEEE
Q 023085 134 -----YFANGVALSRD-EDYVVVCESWKFRCRK 160 (287)
Q Consensus 134 -----~~~~~i~~~~~-~~~l~v~~~~~~~l~~ 160 (287)
.....++++|. .+.+|++...++.|++
T Consensus 176 ~~~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~ 208 (763)
T 3a0f_A 176 SSTYGIGIISVIFDPKNVGTAYVASHAVGGLWV 208 (763)
T ss_dssp CSCTTTCEEEEEECSSSTTCEEEEESSTTCEEE
T ss_pred cCCCccceEEEEECCCCCCEEEEEEeCCCeEEE
Confidence 11234567764 3458887654333544
No 330
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=88.82 E-value=7.9 Score=35.47 Aligned_cols=111 Identities=15% Similarity=0.098 Sum_probs=64.8
Q ss_pred CeEECC-CCcEEEEeCC------------CceEEEc-cCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCc
Q 023085 37 GLTSTK-EGHLIICDNA------------NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPH 101 (287)
Q Consensus 37 ~i~~d~-dg~l~v~~~~------------~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~ 101 (287)
..++.+ +|+||+.... ..+.++| .++ ++.+..... .......++++..+|.||+....
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~-~~~~~~~~~~~~~~g~lyv~GG~------ 262 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVT-KHDMFCPGISMDGNGQIVVTGGN------ 262 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEEC-SCCCSSCEEEECTTSCEEEECSS------
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCC-CCCCccccccCCCCCCEEEeCCC------
Confidence 566666 8898887311 1367888 555 554432211 11123345677788999995211
Q ss_pred ceeeeeeccCCCceEEEEeCCCCeeEEeeccc--cccceEEEccCCCEEEEEeC-CC-----CEEEEEEecC
Q 023085 102 EYCLDILEGKPHGQLLKYDPSSNITTLVADGF--YFANGVALSRDEDYVVVCES-WK-----FRCRKYWLKG 165 (287)
Q Consensus 102 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~l~v~~~-~~-----~~l~~~~~~~ 165 (287)
....+++||+.++++..+.... ..-...++.++++ +|+..- .. ..+.+||...
T Consensus 263 ----------~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 263 ----------DAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp ----------STTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTT
T ss_pred ----------CCCceEEecCcCCceeECCCCCccccccceEEecCCe-EEEEeCcccCCcccccceEeCCCC
Confidence 2236999999888877654211 1223455666787 666643 11 4588888754
No 331
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=88.42 E-value=4.1 Score=34.48 Aligned_cols=73 Identities=11% Similarity=-0.029 Sum_probs=46.3
Q ss_pred cccceEEEcC--------CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCe-eEEeeccccccceEEEccCCC
Q 023085 76 RFANDVVEAS--------DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI-TTLVADGFYFANGVALSRDED 146 (287)
Q Consensus 76 ~~~~~l~~d~--------~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~ 146 (287)
..++++++.+ +|++.++. ..++.|..+|..++. .............++|+|++.
T Consensus 137 ~~v~~v~~~p~~~~~~~~d~~~las~-----------------s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~ 199 (393)
T 4gq1_A 137 NFVNDIDIADVYSADNRLAEQVIASV-----------------GDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNP 199 (393)
T ss_dssp SCEEEEEEEEEECTTCSEEEEEEEEE-----------------ETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEE
T ss_pred CceEEEEEccccccccCCCCCEEEEE-----------------ECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCC
Confidence 4678888865 67777752 234566666654333 333333334556788999886
Q ss_pred EEEEEeCCCCEEEEEEecC
Q 023085 147 YVVVCESWKFRCRKYWLKG 165 (287)
Q Consensus 147 ~l~v~~~~~~~l~~~~~~~ 165 (287)
.+.++....+.|..||+..
T Consensus 200 ~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 200 NQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp EEEEEEETTSEEEEEETTC
T ss_pred ceEEecCCCCEEEEEECCC
Confidence 5566656678899998754
No 332
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=88.25 E-value=8.9 Score=30.89 Aligned_cols=218 Identities=10% Similarity=0.015 Sum_probs=107.3
Q ss_pred CeEEEEE--CCceEEEEeeCC-ccccCeEECCCCcEEEEeCC------CceEEEc-cCC-cEEEeeecCCccccccceEE
Q 023085 14 GWIKRLQ--DGTWVNWKFIDS-QTLVGLTSTKEGHLIICDNA------NGLHKVS-EDG-VENFLSYVNGSKLRFANDVV 82 (287)
Q Consensus 14 g~i~~~~--~~~~~~~~~~~~-~~~~~i~~d~dg~l~v~~~~------~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~ 82 (287)
..+.+|+ .+++......+. ...++.+. -+++||+.... ..++++| .+. ++.+..... +. .-.+++
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r-~~~~~~ 105 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRD--RR-STLGAA 105 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSS--CC-BSCEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCc--cc-cceEEE
Confidence 3578888 556555433221 11112322 36788887321 2488999 566 666643211 11 112232
Q ss_pred EcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeecccc--ccceEEEccCCCEEEEEeCC------
Q 023085 83 EASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFY--FANGVALSRDEDYVVVCESW------ 154 (287)
Q Consensus 83 ~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~l~v~~~~------ 154 (287)
+ -++.+|+.... ........++++|+.+++++.+..... .....+. -++ .||+..-.
T Consensus 106 ~-~~~~iyv~GG~------------~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 106 V-LNGLLYAVGGF------------DGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGG-LLYAVGGYDVASRQ 170 (302)
T ss_dssp E-ETTEEEEEEEE------------CSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETT-EEEEECCEETTTTE
T ss_pred E-ECCEEEEEcCC------------CCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECC-EEEEEeCCCCCCCc
Confidence 2 26788884211 000112468999999888877643211 1122332 234 47876421
Q ss_pred -CCEEEEEEecCCCCcceeEEeccCC-CCC-cceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccC
Q 023085 155 -KFRCRKYWLKGERKGKLETFAENLP-GAP-DNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 231 (287)
Q Consensus 155 -~~~l~~~~~~~~~~~~~~~~~~~~~-~~~-~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
...+++||+...+ ..... ..+ ... ..++. -+++||+...... .
T Consensus 171 ~~~~~~~yd~~~~~---W~~~~-~~p~~r~~~~~~~-~~~~iyv~GG~~~-----------------------------~ 216 (302)
T 2xn4_A 171 CLSTVECYNATTNE---WTYIA-EMSTRRSGAGVGV-LNNLLYAVGGHDG-----------------------------P 216 (302)
T ss_dssp ECCCEEEEETTTTE---EEEEC-CCSSCCBSCEEEE-ETTEEEEECCBSS-----------------------------S
T ss_pred cccEEEEEeCCCCc---EEECC-CCccccccccEEE-ECCEEEEECCCCC-----------------------------C
Confidence 2458888875432 22221 111 111 12222 2577888764310 0
Q ss_pred CCceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEec-CC----CeEEEEeC
Q 023085 232 GGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISL-TS----NFIGKVQL 286 (287)
Q Consensus 232 ~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~-~~----~~i~~~~~ 286 (287)
.....+.+||++.+.-..+..... ......++..+++||+-+= .+ +.|.+||+
T Consensus 217 ~~~~~~~~yd~~~~~W~~~~~~~~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 217 LVRKSVEVYDPTTNAWRQVADMNM--CRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp SBCCCEEEEETTTTEEEEECCCSS--CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred cccceEEEEeCCCCCEeeCCCCCC--ccccCeEEEECCEEEEECCcCCCcccccEEEEcC
Confidence 112368889988766555543111 1122334445788887642 22 34777775
No 333
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=87.32 E-value=10 Score=30.66 Aligned_cols=228 Identities=12% Similarity=0.088 Sum_probs=111.3
Q ss_pred CCcEEEEec-----CCeEEEEE--CCceEEEEeeCC-ccccCeEECCCCcEEEEeCC----------CceEEEc-cCC-c
Q 023085 4 NGVIYTATR-----DGWIKRLQ--DGTWVNWKFIDS-QTLVGLTSTKEGHLIICDNA----------NGLHKVS-EDG-V 63 (287)
Q Consensus 4 ~G~l~~~~~-----~g~i~~~~--~~~~~~~~~~~~-~~~~~i~~d~dg~l~v~~~~----------~gi~~~~-~~g-~ 63 (287)
++.||+--. -..+.+|+ ++++......+. ...+.++. -+++||+.... ..++++| .+. +
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 355665421 23678888 566655533221 11112222 36788876321 2478888 556 6
Q ss_pred EEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeecccc--ccceEEE
Q 023085 64 ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFY--FANGVAL 141 (287)
Q Consensus 64 ~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~i~~ 141 (287)
+.+.... .+... ..+++ -++.||+.... . .......++++|+.+++++.+..... .....+.
T Consensus 103 ~~~~~~p--~~r~~-~~~~~-~~~~iyv~GG~--------~----~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 166 (308)
T 1zgk_A 103 SPCAPMS--VPRNR-IGVGV-IDGHIYAVGGS--------H----GCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV 166 (308)
T ss_dssp EECCCCS--SCCBT-CEEEE-ETTEEEEECCE--------E----TTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred eECCCCC--cCccc-cEEEE-ECCEEEEEcCC--------C----CCcccccEEEECCCCCeEeECCCCCccccceEEEE
Confidence 6653221 11112 22222 26788885211 0 00112469999999888877643211 1123332
Q ss_pred ccCCCEEEEEeCC-----CCEEEEEEecCCCCcceeEEeccCC-CC-CcceeeCCCCCEEEEEeccchhHHHHhhcchhH
Q 023085 142 SRDEDYVVVCESW-----KFRCRKYWLKGERKGKLETFAENLP-GA-PDNINLAPDGTFWIAIIKLDARRMKILNSSKLI 214 (287)
Q Consensus 142 ~~~~~~l~v~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~-~~-~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~ 214 (287)
. ++ .||+..-. .+.+++||+...+ ..... ..+ .. ...++.. +++||+......
T Consensus 167 ~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~---W~~~~-~~p~~r~~~~~~~~-~~~iyv~GG~~~------------- 226 (308)
T 1zgk_A 167 L-NR-LLYAVGGFDGTNRLNSAECYYPERNE---WRMIT-AMNTIRSGAGVCVL-HNCIYAAGGYDG------------- 226 (308)
T ss_dssp E-TT-EEEEECCBCSSCBCCCEEEEETTTTE---EEECC-CCSSCCBSCEEEEE-TTEEEEECCBCS-------------
T ss_pred E-CC-EEEEEeCCCCCCcCceEEEEeCCCCe---EeeCC-CCCCccccceEEEE-CCEEEEEeCCCC-------------
Confidence 2 34 57776421 2458889875432 11111 111 11 1122222 677888764310
Q ss_pred HHHHHhCCccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEe-cC----CCeEEEEeC
Q 023085 215 KHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVIS-LT----SNFIGKVQL 286 (287)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~-~~----~~~i~~~~~ 286 (287)
......+.+||++.+.-..+..... ......++..+++||+-+ .. .+.|.+||+
T Consensus 227 ----------------~~~~~~v~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 227 ----------------QDQLNSVERYDVETETWTFVAPMKH--RRSALGITVHQGRIYVLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp ----------------SSBCCCEEEEETTTTEEEECCCCSS--CCBSCEEEEETTEEEEECCBCSSCBCCEEEEEET
T ss_pred ----------------CCccceEEEEeCCCCcEEECCCCCC--CccceEEEEECCEEEEEcCcCCCcccceEEEEcC
Confidence 0112468889988766555442111 112233444578888754 22 345677765
No 334
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=86.29 E-value=12 Score=30.36 Aligned_cols=212 Identities=13% Similarity=-0.052 Sum_probs=102.5
Q ss_pred CeEEEEE--CCceEEEEeeCCccccC-eEECCCCcEEEEeC------C--C----ceEEEc-cCC-cEEEeeecCCcccc
Q 023085 14 GWIKRLQ--DGTWVNWKFIDSQTLVG-LTSTKEGHLIICDN------A--N----GLHKVS-EDG-VENFLSYVNGSKLR 76 (287)
Q Consensus 14 g~i~~~~--~~~~~~~~~~~~~~~~~-i~~d~dg~l~v~~~------~--~----gi~~~~-~~g-~~~~~~~~~~~~~~ 76 (287)
..+.+|| ++++.....+...+..+ -+...+++||+... . . .++++| .++ ++.+.+.. .+.
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r- 89 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLP--SPR- 89 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBS--SCE-
T ss_pred CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCC--cch-
Confidence 5789999 66665422221112112 22334778887642 1 0 177888 556 65553321 111
Q ss_pred ccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccc--cccceEEEccCCCEEEEEeCC
Q 023085 77 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF--YFANGVALSRDEDYVVVCESW 154 (287)
Q Consensus 77 ~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~l~v~~~~ 154 (287)
.-.+++.. ++.||+..... .. ........++++|+.+++++.+.... ......+. .++ .||+..-.
T Consensus 90 ~~~~~~~~-~~~lyv~GG~~------~~---~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~ 157 (315)
T 4asc_A 90 CLFGLGEA-LNSIYVVGGRE------IK---DGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMD-LVYVIGGK 157 (315)
T ss_dssp ESCEEEEE-TTEEEEECCEE------SS---TTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETT-EEEEECCB
T ss_pred hceeEEEE-CCEEEEEeCCc------CC---CCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECC-EEEEEeCC
Confidence 11223232 67888852110 00 00112346999999988887664321 11122332 334 47776532
Q ss_pred ------CCEEEEEEecCCCCcceeEEeccCC-CCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccc
Q 023085 155 ------KFRCRKYWLKGERKGKLETFAENLP-GAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQ 227 (287)
Q Consensus 155 ------~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
.+.+++||+...+ ..... ..+ .....-+.--+++||+......
T Consensus 158 ~~~~~~~~~~~~yd~~~~~---W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~-------------------------- 207 (315)
T 4asc_A 158 GSDRKCLNKMCVYDPKKFE---WKELA-PMQTARSLFGATVHDGRIIVAAGVTD-------------------------- 207 (315)
T ss_dssp CTTSCBCCCEEEEETTTTE---EEECC-CCSSCCBSCEEEEETTEEEEEEEECS--------------------------
T ss_pred CCCCcccceEEEEeCCCCe---EEECC-CCCCchhceEEEEECCEEEEEeccCC--------------------------
Confidence 1368899875432 11111 111 1111112222668888765411
Q ss_pred cccCCCceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEe
Q 023085 228 FITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVIS 275 (287)
Q Consensus 228 ~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~ 275 (287)
......+.+||++.+.-..+..... ......++..+++||+-+
T Consensus 208 ---~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~l~v~G 250 (315)
T 4asc_A 208 ---TGLTSSAEVYSITDNKWAPFEAFPQ--ERSSLSLVSLVGTLYAIG 250 (315)
T ss_dssp ---SSEEEEEEEEETTTTEEEEECCCSS--CCBSCEEEEETTEEEEEE
T ss_pred ---CCccceEEEEECCCCeEEECCCCCC--cccceeEEEECCEEEEEC
Confidence 1112478899988766555543111 112234444577888743
No 335
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=85.92 E-value=2.8 Score=37.81 Aligned_cols=85 Identities=13% Similarity=0.101 Sum_probs=57.5
Q ss_pred eEEEEeCCC----C-eeEEeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecC------CCCcce--eEEec-cCCC
Q 023085 115 QLLKYDPSS----N-ITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG------ERKGKL--ETFAE-NLPG 180 (287)
Q Consensus 115 ~v~~~~~~~----~-~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~------~~~~~~--~~~~~-~~~~ 180 (287)
+|-.+|... + .+..+.+....|+|+-++|||++++++.-...++..++.+. .++.++ ..... ...-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 466677654 2 23334445568999999999999999998889999999762 111111 11221 1223
Q ss_pred CCcceeeCCCCCEEEEEec
Q 023085 181 APDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 181 ~~~~i~~d~~G~lwv~~~~ 199 (287)
.|...++|.+|+.|.+..-
T Consensus 379 GPlHt~Fd~~G~aYTtlfi 397 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFI 397 (638)
T ss_dssp CEEEEEECSSSEEEEEETT
T ss_pred cccEEEECCCCceEeeeee
Confidence 5889999999999998853
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=84.56 E-value=5.5 Score=33.41 Aligned_cols=106 Identities=12% Similarity=0.034 Sum_probs=54.3
Q ss_pred CCCceEEEEeCCCCeeEEeeccc--cccceEE--EccCCCEEEEEe-CCCCEEEEEEecCCCCcceeEEecc-CCCCCc-
Q 023085 111 KPHGQLLKYDPSSNITTLVADGF--YFANGVA--LSRDEDYVVVCE-SWKFRCRKYWLKGERKGKLETFAEN-LPGAPD- 183 (287)
Q Consensus 111 ~~~~~v~~~~~~~~~~~~~~~~~--~~~~~i~--~~~~~~~l~v~~-~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~- 183 (287)
+.++.|+.+|.++|+........ ..+-... -.+.+..+|+.. +..++|+.++.+++. .+...-... ....|.
T Consensus 17 t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~-~~~~~~~~~lv~~SP~~ 95 (339)
T 2be1_A 17 DVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGL-QKLPLSIRQLVSTSPLH 95 (339)
T ss_dssp ETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEE-EEEEEEHHHHHTTCSEE
T ss_pred eCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCc-EEeeeccccceeccccc
Confidence 34567788887777765543221 1110000 001233466665 467788888864321 111111100 000110
Q ss_pred ---ceee------CCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEEC
Q 023085 184 ---NINL------APDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVD 252 (287)
Q Consensus 184 ---~i~~------d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~ 252 (287)
...+ ..+|.+|+++.. +.++.+|.. |+.++.+..
T Consensus 96 ~~~~pvv~~~~~~~~~g~Vy~Gs~~-----------------------------------g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 96 LKTNIVVNDSGKIVEDEKVYTGSMR-----------------------------------TIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp EECC----------CCEEEEECEEE-----------------------------------EEEEEEETTTCCEEEEEST
T ss_pred cCCCceeecccccccCCEEEEEecC-----------------------------------CEEEEEECCCCcEEEEEec
Confidence 1112 257889999987 688999864 899998865
No 337
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=83.90 E-value=28 Score=32.45 Aligned_cols=116 Identities=7% Similarity=0.047 Sum_probs=63.4
Q ss_pred CeEECCC--CcEEEEeCCCceEEEccCC--cEEEeeecCCc--cccccceEEEcC--CCcEEEEcCCCCCCCcceeeeee
Q 023085 37 GLTSTKE--GHLIICDNANGLHKVSEDG--VENFLSYVNGS--KLRFANDVVEAS--DGSLYFTVSSSKYLPHEYCLDIL 108 (287)
Q Consensus 37 ~i~~d~d--g~l~v~~~~~gi~~~~~~g--~~~~~~~~~~~--~~~~~~~l~~d~--~g~l~v~~~~~~~~~~~~~~~~~ 108 (287)
+|++++. +.+|+++...+|++.+..| .+++....... ....+.+|++|+ .+.+|++...... .|
T Consensus 27 ~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~---~~----- 98 (737)
T 2cn3_A 27 GIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTN---DW----- 98 (737)
T ss_dssp EEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSS---SS-----
T ss_pred EEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEeccccc---cc-----
Confidence 7889876 6799988667899987555 66653311100 123467899997 3589986321000 00
Q ss_pred ccCCCceEEEEeCCCCeeEEeecccc---------ccceEEEccC-CCEEEEEeCCCCEEEEE
Q 023085 109 EGKPHGQLLKYDPSSNITTLVADGFY---------FANGVALSRD-EDYVVVCESWKFRCRKY 161 (287)
Q Consensus 109 ~~~~~~~v~~~~~~~~~~~~~~~~~~---------~~~~i~~~~~-~~~l~v~~~~~~~l~~~ 161 (287)
......|++-.-....++.+..... ....++++|. .+.+|+....+..|++=
T Consensus 99 -~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S 160 (737)
T 2cn3_A 99 -LPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRS 160 (737)
T ss_dssp -SCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEEE
T ss_pred -ccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEEe
Confidence 0112467766433233444332211 1256888874 35678775333456653
No 338
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=83.58 E-value=19 Score=30.28 Aligned_cols=58 Identities=10% Similarity=-0.059 Sum_probs=33.7
Q ss_pred EEEcc-CCCEEEEEeCCCCEEEEEEecCCCCcceeEEeccCCCCCcceeeCCCCCEEEEEec
Q 023085 139 VALSR-DEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 199 (287)
Q Consensus 139 i~~~~-~~~~l~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~lwv~~~~ 199 (287)
..+.+ .++.+.++....+.|..|+...+... .... ........+++.++|++..+...
T Consensus 321 ~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~--~~~~-~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 321 ACPHPRYMDYFATAHSQHGLIQLINTYEKDSN--SIPI-QLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp CEECSSCTTEEEEEETTTTEEEEEETTCTTCC--EEEE-ECSSCEEEEEECTTSSEEEEEES
T ss_pred EEEccCCCCEEEEEECCCCEEEEEECCCCcEE--EEec-CCCCcEEEEEEcCCCCEEEEEeC
Confidence 34444 34445555566788999997643221 1111 12223567999999987766544
No 339
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=83.38 E-value=16 Score=29.29 Aligned_cols=133 Identities=15% Similarity=0.161 Sum_probs=69.1
Q ss_pred CeEEEEE--CCc---eEEEEeeCC-ccccCeEECCCCcEEEEeCC------CceEEEc-cCC-cEEEeeecCCccccccc
Q 023085 14 GWIKRLQ--DGT---WVNWKFIDS-QTLVGLTSTKEGHLIICDNA------NGLHKVS-EDG-VENFLSYVNGSKLRFAN 79 (287)
Q Consensus 14 g~i~~~~--~~~---~~~~~~~~~-~~~~~i~~d~dg~l~v~~~~------~gi~~~~-~~g-~~~~~~~~~~~~~~~~~ 79 (287)
..+++|+ +++ ++.....+. ...+..+. -+++||+.... ..++++| .+. ++.+.... .+... .
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r~~-~ 153 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQ--TAREG-A 153 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECS--SCCBS-C
T ss_pred ceEEEEECCCCCCCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCC--CCccc-c
Confidence 3588888 555 665543221 11112222 36788887421 2488899 566 66664322 11112 2
Q ss_pred eEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeecccc--ccceEEEccCCCEEEEEeCC---
Q 023085 80 DVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFY--FANGVALSRDEDYVVVCESW--- 154 (287)
Q Consensus 80 ~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~l~v~~~~--- 154 (287)
.+++ -++.||+..... .......++++|+.+++++.+..... ....++. .++ .||+..-.
T Consensus 154 ~~~~-~~~~iyv~GG~~------------~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~-~i~v~GG~~~~ 218 (301)
T 2vpj_A 154 GLVV-ASGVIYCLGGYD------------GLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LND-HIYVVGGFDGT 218 (301)
T ss_dssp EEEE-ETTEEEEECCBC------------SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETT-EEEEECCBCSS
T ss_pred eEEE-ECCEEEEECCCC------------CCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECC-EEEEEeCCCCC
Confidence 2222 267888852110 00113469999999888877643211 1122222 234 47776422
Q ss_pred --CCEEEEEEecC
Q 023085 155 --KFRCRKYWLKG 165 (287)
Q Consensus 155 --~~~l~~~~~~~ 165 (287)
.+.+++||+..
T Consensus 219 ~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 219 AHLSSVEAYNIRT 231 (301)
T ss_dssp SBCCCEEEEETTT
T ss_pred cccceEEEEeCCC
Confidence 24688998754
No 340
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=82.09 E-value=11 Score=35.51 Aligned_cols=144 Identities=10% Similarity=0.012 Sum_probs=72.3
Q ss_pred CCcEEEEecCCeEEEEE-CC-ceEEEEee-C---CccccCeEECC--CCcEEEEeCCCceEEEccCC--cEEEeeecCCc
Q 023085 4 NGVIYTATRDGWIKRLQ-DG-TWVNWKFI-D---SQTLVGLTSTK--EGHLIICDNANGLHKVSEDG--VENFLSYVNGS 73 (287)
Q Consensus 4 ~G~l~~~~~~g~i~~~~-~~-~~~~~~~~-~---~~~~~~i~~d~--dg~l~v~~~~~gi~~~~~~g--~~~~~~~~~~~ 73 (287)
.+.+|+++ .+.|++-. .| .++.+... + .... .|.+.+ +++||++...++|++-+..| ++.+.......
T Consensus 600 ~~~~y~g~-~g~v~~S~DgG~tW~~~~~~lp~~~~~~~-~i~~~~~~~~~l~~~~~~~~l~~S~D~G~tW~~~~~~~~~~ 677 (763)
T 3a0f_A 600 ANTFYVYV-EGDFFVSTDGGKSYTKKGNGLPCCWTYTG-TPVTSNLRAGELWVSVKGVGIYHSTDFGNTFTALAGSGSSL 677 (763)
T ss_dssp TTCEEEEE-TTEEEEESSTTSBCEEECBTSCCSSCCCE-EEEECSSSTTCEEEEETTTEEEEESSTTSBCEECTTBTTTB
T ss_pred CCEEEEEc-CCCEEEEeCCCcCccccccCCCcccCccc-cEEECCCCCCcEEEEcCCCeEEEEcCCCCCceEccCCCccc
Confidence 45788885 56777765 33 44444211 1 1122 155554 67899998766788776554 66653111100
Q ss_pred ccc-ccceEEEc-C-CCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEee---ccccccceEEEccCC-C
Q 023085 74 KLR-FANDVVEA-S-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA---DGFYFANGVALSRDE-D 146 (287)
Q Consensus 74 ~~~-~~~~l~~d-~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~-~ 146 (287)
... .-.+++.. . ...||+.... .....++||+-+-....+..+. ..+..+..++++|.. .
T Consensus 678 ~~~~~~~g~~~~~~~~~~l~~~G~~-------------~~~~~~gl~~S~D~G~tW~~~~~~~~~~~~~~~i~~~p~~~~ 744 (763)
T 3a0f_A 678 NPAVFSIGAPQTPNATETLFLWGIP-------------SASQPEGLYMSTDNGGLWTRLNDDAHNYGGATVISGDPRIYG 744 (763)
T ss_dssp EEEEEEEECCSSTTSSCEEEEEEEC-------------STTSCSEEEEESSTTSCCEECSCTTCCTBCEEEEEECTTSTT
T ss_pred ccceeEEeeecCCCCCceEEEEEEc-------------ccCCCcEEEEeCCCCCCcEeccCccccCCCcceEEeCCCCCC
Confidence 000 00011222 2 3467874200 0012467887765434455554 222223357778754 3
Q ss_pred EEEEEeCCCCEEEEEEe
Q 023085 147 YVVVCESWKFRCRKYWL 163 (287)
Q Consensus 147 ~l~v~~~~~~~l~~~~~ 163 (287)
.||++.. +..|+.-++
T Consensus 745 ~v~~~T~-GrGi~~g~~ 760 (763)
T 3a0f_A 745 RVYIGMN-GRGIICAQA 760 (763)
T ss_dssp EEEEEEB-SSCEEEEES
T ss_pred EEEEeCC-CCeEEEEec
Confidence 5888764 556776664
No 341
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=81.25 E-value=20 Score=29.02 Aligned_cols=217 Identities=12% Similarity=0.051 Sum_probs=103.5
Q ss_pred cEEEEecCCeEEEEE--CCceEEEEeeCCcccc-CeEECCCCcEEEEeCC----C--------ceEEEc-cCC-cEEEee
Q 023085 6 VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLV-GLTSTKEGHLIICDNA----N--------GLHKVS-EDG-VENFLS 68 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~-~i~~d~dg~l~v~~~~----~--------gi~~~~-~~g-~~~~~~ 68 (287)
.||+- .+..+.+|+ ++++.....+...|.. .-+...++.||+.... . -++++| .++ ++.+..
T Consensus 17 ~i~~~-GG~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 17 LILLV-NDTAAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEEE-CSSEEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhhc-cccceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 34443 233588898 5666653322212211 2233457788887431 0 177888 556 665532
Q ss_pred ecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccc--cccceEEEccCCC
Q 023085 69 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF--YFANGVALSRDED 146 (287)
Q Consensus 69 ~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~ 146 (287)
... + ..-.++++. ++.||+...... ........++++|+.+++++.+.... ...+..+. .++
T Consensus 96 ~p~--~-r~~~~~~~~-~~~iyv~GG~~~----------~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~- 159 (318)
T 2woz_A 96 LPS--A-RCLFGLGEV-DDKIYVVAGKDL----------QTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNG- 159 (318)
T ss_dssp BSS--C-BCSCEEEEE-TTEEEEEEEEBT----------TTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETT-
T ss_pred CCc--c-ccccceEEE-CCEEEEEcCccC----------CCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECC-
Confidence 211 1 122233332 678888421100 00011246999999988887764311 11223333 344
Q ss_pred EEEEEeCC------CCEEEEEEecCCCCcceeEEeccCCCCC-cceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHH
Q 023085 147 YVVVCESW------KFRCRKYWLKGERKGKLETFAENLPGAP-DNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLA 219 (287)
Q Consensus 147 ~l~v~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~ 219 (287)
.||+..-. .+.+++||+...+ ............ ..++. -+++||+......
T Consensus 160 ~iyv~GG~~~~~~~~~~~~~yd~~~~~---W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~------------------ 217 (318)
T 2woz_A 160 MIYCLGGKTDDKKCTNRVFIYNPKKGD---WKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTE------------------ 217 (318)
T ss_dssp EEEEECCEESSSCBCCCEEEEETTTTE---EEEECCCSSCCBSCEEEE-ETTEEEEEEEEET------------------
T ss_pred EEEEEcCCCCCCCccceEEEEcCCCCE---EEECCCCCCCcccceEEE-ECCEEEEEcCcCC------------------
Confidence 47776421 2358899875432 222211111111 12222 3578888865310
Q ss_pred hCCccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEE
Q 023085 220 AYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVI 274 (287)
Q Consensus 220 ~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~ 274 (287)
......+.+||++.+.-..+..... ......++..+++||+-
T Consensus 218 -----------~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~i~v~ 259 (318)
T 2woz_A 218 -----------DGLSASVEAFDLKTNKWEVMTEFPQ--ERSSISLVSLAGSLYAI 259 (318)
T ss_dssp -----------TEEEEEEEEEETTTCCEEECCCCSS--CCBSCEEEEETTEEEEE
T ss_pred -----------CCccceEEEEECCCCeEEECCCCCC--cccceEEEEECCEEEEE
Confidence 0012467889987665444432111 11223445567888875
No 342
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=80.94 E-value=36 Score=31.71 Aligned_cols=112 Identities=10% Similarity=0.070 Sum_probs=59.0
Q ss_pred CeEEC-CCCc-EEEEeCCC-----ceEEEc-cCCcEEEeeecCCccccccceEEEcCCC-cEEEEcCCCCCCCcceeeee
Q 023085 37 GLTST-KEGH-LIICDNAN-----GLHKVS-EDGVENFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDI 107 (287)
Q Consensus 37 ~i~~d-~dg~-l~v~~~~~-----gi~~~~-~~g~~~~~~~~~~~~~~~~~~l~~d~~g-~l~v~~~~~~~~~~~~~~~~ 107 (287)
+..+. |||+ |.++.... .|++++ .+|.+.+... .. ....+++..+|| .|+++...
T Consensus 178 ~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~---~~-~~~~~~~WspDg~~l~y~~~d------------ 241 (751)
T 2xe4_A 178 EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK---VS-GTNGEIVWGPDHTSLFYVTKD------------ 241 (751)
T ss_dssp EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC---EE-EECSCCEECSSTTEEEEEEEC------------
T ss_pred eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc---cc-CceeeEEEecCCCEEEEEEEC------------
Confidence 56789 9996 44343222 278887 4441111110 00 112456788887 45554211
Q ss_pred eccCCCceEEEEeCCCCe---eEEee-ccccccceEEEccCCCEEEEEeCC--CCEEEEEEecC
Q 023085 108 LEGKPHGQLLKYDPSSNI---TTLVA-DGFYFANGVALSRDEDYVVVCESW--KFRCRKYWLKG 165 (287)
Q Consensus 108 ~~~~~~~~v~~~~~~~~~---~~~~~-~~~~~~~~i~~~~~~~~l~v~~~~--~~~l~~~~~~~ 165 (287)
.......|++++..+++ ...+. .......++.++|||+.|++.... ...|+.+++++
T Consensus 242 -~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 242 -ETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp -TTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred -CCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 00111368888876543 11221 111233466799999988876632 34688888764
No 343
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=80.71 E-value=20 Score=28.65 Aligned_cols=219 Identities=8% Similarity=0.054 Sum_probs=105.5
Q ss_pred CeEEEEE--CCceEEEEeeCC-ccccCeEECCCCcEEEEeCC------CceEEEc-cCC----cEEEeeecCCccccccc
Q 023085 14 GWIKRLQ--DGTWVNWKFIDS-QTLVGLTSTKEGHLIICDNA------NGLHKVS-EDG----VENFLSYVNGSKLRFAN 79 (287)
Q Consensus 14 g~i~~~~--~~~~~~~~~~~~-~~~~~i~~d~dg~l~v~~~~------~gi~~~~-~~g----~~~~~~~~~~~~~~~~~ 79 (287)
..+.+|+ ++++......+. ...+..+ .-+++||+.... ..+++++ .++ ++.+.... .+... .
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p--~~r~~-~ 106 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASV-SLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMN--VRRGL-A 106 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCS--SCCBS-C
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEE-EECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCC--CCccc-e
Confidence 3678888 566655443221 1111222 236788876321 2488888 332 34442211 11112 2
Q ss_pred eEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccc--cccceEEEccCCCEEEEEeCC---
Q 023085 80 DVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF--YFANGVALSRDEDYVVVCESW--- 154 (287)
Q Consensus 80 ~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~l~v~~~~--- 154 (287)
.++.. ++.||+..... .......++++|+.+++++.+.... ......+. .++ .||+..-.
T Consensus 107 ~~~~~-~~~lyv~GG~~------------~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~ 171 (301)
T 2vpj_A 107 GATTL-GDMIYVSGGFD------------GSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASG-VIYCLGGYDGL 171 (301)
T ss_dssp EEEEE-TTEEEEECCBC------------SSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETT-EEEEECCBCSS
T ss_pred eEEEE-CCEEEEEcccC------------CCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECC-EEEEECCCCCC
Confidence 22222 67888852110 0011347999999988887764321 11123332 244 47776421
Q ss_pred --CCEEEEEEecCCCCcceeEEeccCC-CCCcceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccC
Q 023085 155 --KFRCRKYWLKGERKGKLETFAENLP-GAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 231 (287)
Q Consensus 155 --~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
.+.+++||+...+ ..... ..+ .....-+.--+++||+...... .
T Consensus 172 ~~~~~~~~~d~~~~~---W~~~~-~~p~~r~~~~~~~~~~~i~v~GG~~~-----------------------------~ 218 (301)
T 2vpj_A 172 NILNSVEKYDPHTGH---WTNVT-PMATKRSGAGVALLNDHIYVVGGFDG-----------------------------T 218 (301)
T ss_dssp CBCCCEEEEETTTTE---EEEEC-CCSSCCBSCEEEEETTEEEEECCBCS-----------------------------S
T ss_pred cccceEEEEeCCCCc---EEeCC-CCCcccccceEEEECCEEEEEeCCCC-----------------------------C
Confidence 2468889875432 22221 111 1111111222567888764310 0
Q ss_pred CCceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEEEEEe-cCC----CeEEEEeC
Q 023085 232 GGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVIS-LTS----NFIGKVQL 286 (287)
Q Consensus 232 ~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~-~~~----~~i~~~~~ 286 (287)
.....+.++|++.+.-..+..... ......++..+++||+-+ ..+ +.|.+||+
T Consensus 219 ~~~~~v~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 219 AHLSSVEAYNIRTDSWTTVTSMTT--PRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp SBCCCEEEEETTTTEEEEECCCSS--CCBSCEEEEETTEEEEECCBCSSSBEEEEEEEET
T ss_pred cccceEEEEeCCCCcEEECCCCCC--cccceeEEEECCEEEEEcCcCCCcccccEEEEcC
Confidence 012468889988666555542111 112233444578888764 222 45677765
No 344
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=80.62 E-value=21 Score=28.88 Aligned_cols=195 Identities=10% Similarity=0.000 Sum_probs=89.8
Q ss_pred cEEEEeCCCceEEEc-cCC-cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCC
Q 023085 45 HLIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS 122 (287)
Q Consensus 45 ~l~v~~~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 122 (287)
.|++.. +..+.++| .++ .... ......+ ..-.+ ++..++.||+..... .............++++|+.
T Consensus 17 ~i~~~G-G~~~~~yd~~~~~W~~~-~~~~~~~-r~~~~-~~~~~~~lyv~GG~~------~~~~~~~~~~~~~~~~~d~~ 86 (318)
T 2woz_A 17 LILLVN-DTAAVAYDPMENECYLT-ALAEQIP-RNHSS-IVTQQNQVYVVGGLY------VDEENKDQPLQSYFFQLDNV 86 (318)
T ss_dssp EEEEEC-SSEEEEEETTTTEEEEE-EECTTSC-SSEEE-EECSSSCEEEEESSC------C-------CCCBEEEEEETT
T ss_pred hhhhcc-ccceEEECCCCCceecc-cCCccCC-ccceE-EEEECCEEEEECCcc------cCccccCCCccccEEEEeCC
Confidence 455553 34688999 555 5442 2111111 12122 344568888853210 00000000112248999999
Q ss_pred CCeeEEeeccc--cccceEEEccCCCEEEEEeCC----C---CEEEEEEecCCCCcceeEEeccCCC-C-CcceeeCCCC
Q 023085 123 SNITTLVADGF--YFANGVALSRDEDYVVVCESW----K---FRCRKYWLKGERKGKLETFAENLPG-A-PDNINLAPDG 191 (287)
Q Consensus 123 ~~~~~~~~~~~--~~~~~i~~~~~~~~l~v~~~~----~---~~l~~~~~~~~~~~~~~~~~~~~~~-~-~~~i~~d~~G 191 (287)
+++++.+.... ....+++.. ++ .||+..-. . +.+++||....+ ..... ..+. . ...++. -++
T Consensus 87 ~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~---W~~~~-~~p~~r~~~~~~~-~~~ 159 (318)
T 2woz_A 87 SSEWVGLPPLPSARCLFGLGEV-DD-KIYVVAGKDLQTEASLDSVLCYDPVAAK---WSEVK-NLPIKVYGHNVIS-HNG 159 (318)
T ss_dssp TTEEEECSCBSSCBCSCEEEEE-TT-EEEEEEEEBTTTCCEEEEEEEEETTTTE---EEEEC-CCSSCEESCEEEE-ETT
T ss_pred CCcEEECCCCCccccccceEEE-CC-EEEEEcCccCCCCcccceEEEEeCCCCC---EeECC-CCCCcccccEEEE-ECC
Confidence 88887664211 112233322 34 47776421 1 357888865432 22221 1111 1 112222 467
Q ss_pred CEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEEEEEeCCEE
Q 023085 192 TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHL 271 (287)
Q Consensus 192 ~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l 271 (287)
+||+....... ......+.+||++.+.-..+..... .....+++..+++|
T Consensus 160 ~iyv~GG~~~~----------------------------~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~i 209 (318)
T 2woz_A 160 MIYCLGGKTDD----------------------------KKCTNRVFIYNPKKGDWKDLAPMKT--PRSMFGVAIHKGKI 209 (318)
T ss_dssp EEEEECCEESS----------------------------SCBCCCEEEEETTTTEEEEECCCSS--CCBSCEEEEETTEE
T ss_pred EEEEEcCCCCC----------------------------CCccceEEEEcCCCCEEEECCCCCC--CcccceEEEECCEE
Confidence 88887643100 0112468899988765555432111 11223344457888
Q ss_pred EEEe-cC----CCeEEEEeC
Q 023085 272 YVIS-LT----SNFIGKVQL 286 (287)
Q Consensus 272 ~i~~-~~----~~~i~~~~~ 286 (287)
|+-+ .. .+.+.+||+
T Consensus 210 yv~GG~~~~~~~~~~~~yd~ 229 (318)
T 2woz_A 210 VIAGGVTEDGLSASVEAFDL 229 (318)
T ss_dssp EEEEEEETTEEEEEEEEEET
T ss_pred EEEcCcCCCCccceEEEEEC
Confidence 8764 21 135566664
No 345
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=79.59 E-value=39 Score=31.24 Aligned_cols=150 Identities=9% Similarity=0.014 Sum_probs=74.7
Q ss_pred CeEECCCCcEEEEeCC-----CceEEEc-cCC-cEEEe-eec-C-CccccccceEEEcC-CCcEEEEcCCCCCCCcceee
Q 023085 37 GLTSTKEGHLIICDNA-----NGLHKVS-EDG-VENFL-SYV-N-GSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCL 105 (287)
Q Consensus 37 ~i~~d~dg~l~v~~~~-----~gi~~~~-~~g-~~~~~-~~~-~-~~~~~~~~~l~~d~-~g~l~v~~~~~~~~~~~~~~ 105 (287)
+.+..-++.||+.... ..+++++ .++ ++.+. +.. . ......-.++++-. +|.||+......
T Consensus 391 g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~-------- 462 (695)
T 2zwa_A 391 GDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKA-------- 462 (695)
T ss_dssp CEEEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSS--------
T ss_pred eEEEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCC--------
Confidence 3333356788887421 2488999 666 77665 211 0 11112223444444 788998522100
Q ss_pred eeeccCCCceEEEEeCCCCeeEEeeccc--cccceEEEccCCCEEEEEeCCC--CEEEEEEecCCCCcceeEEeccCC--
Q 023085 106 DILEGKPHGQLLKYDPSSNITTLVADGF--YFANGVALSRDEDYVVVCESWK--FRCRKYWLKGERKGKLETFAENLP-- 179 (287)
Q Consensus 106 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~l~v~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~-- 179 (287)
.......+++||+.+++++.+.... ...+..+...+++ ||+..-.. ..+++||....+-....... ..+
T Consensus 463 ---~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g-~~p~~ 537 (695)
T 2zwa_A 463 ---PHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGN-VLILGGVTEGPAMLLYNVTEEIFKDVTPKD-EFFQN 537 (695)
T ss_dssp ---TTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSC-EEEECCBCSSCSEEEEETTTTEEEECCCSS-GGGGS
T ss_pred ---CCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCE-EEEECCCCCCCCEEEEECCCCceEEccCCC-CCCCc
Confidence 0001246999999988887764321 1223344323555 77764211 16889987543211111100 011
Q ss_pred -CCCcceeeCCC-CCEEEEEec
Q 023085 180 -GAPDNINLAPD-GTFWIAIIK 199 (287)
Q Consensus 180 -~~~~~i~~d~~-G~lwv~~~~ 199 (287)
.....++++.+ ++||+....
T Consensus 538 r~~~~a~v~~~~~~~iyv~GG~ 559 (695)
T 2zwa_A 538 SLVSAGLEFDPVSKQGIILGGG 559 (695)
T ss_dssp CCBSCEEEEETTTTEEEEECCB
T ss_pred ccceeEEEEeCCCCEEEEECCc
Confidence 11222555655 789988754
No 346
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=74.25 E-value=32 Score=27.62 Aligned_cols=133 Identities=12% Similarity=0.157 Sum_probs=67.6
Q ss_pred eEEEEE--CCceEEEEeeCC-ccccCeEECCCCcEEEEeC------CCceEEEc-cCC-cEEEeeecCCccccccceEEE
Q 023085 15 WIKRLQ--DGTWVNWKFIDS-QTLVGLTSTKEGHLIICDN------ANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVE 83 (287)
Q Consensus 15 ~i~~~~--~~~~~~~~~~~~-~~~~~i~~d~dg~l~v~~~------~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~ 83 (287)
.+.+|+ +++++.....+. ...+..+. -+++||+... ...+.++| .+. ++.+.... .+. .-..+++
T Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r-~~~~~~~ 166 (308)
T 1zgk_A 91 ALDCYNPMTNQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPML--TRR-IGVGVAV 166 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCS--SCC-BSCEEEE
T ss_pred eEEEECCCCCeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCC--ccc-cceEEEE
Confidence 577788 555555433221 11112222 3678888732 13488888 555 66653321 111 1122223
Q ss_pred cCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccc--cccceEEEccCCCEEEEEeCC-----CC
Q 023085 84 ASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF--YFANGVALSRDEDYVVVCESW-----KF 156 (287)
Q Consensus 84 d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~l~v~~~~-----~~ 156 (287)
. ++.||+..... .......++++|+.+++++.+.... ......+.. ++ .||+..-. ..
T Consensus 167 ~-~~~iyv~GG~~------------~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~ 231 (308)
T 1zgk_A 167 L-NRLLYAVGGFD------------GTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HN-CIYAAGGYDGQDQLN 231 (308)
T ss_dssp E-TTEEEEECCBC------------SSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TT-EEEEECCBCSSSBCC
T ss_pred E-CCEEEEEeCCC------------CCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CC-EEEEEeCCCCCCccc
Confidence 2 67888852110 0011346999999988887664311 111233322 34 47776522 24
Q ss_pred EEEEEEecCC
Q 023085 157 RCRKYWLKGE 166 (287)
Q Consensus 157 ~l~~~~~~~~ 166 (287)
.+++||+...
T Consensus 232 ~v~~yd~~~~ 241 (308)
T 1zgk_A 232 SVERYDVETE 241 (308)
T ss_dssp CEEEEETTTT
T ss_pred eEEEEeCCCC
Confidence 6889997543
No 347
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=73.96 E-value=16 Score=33.75 Aligned_cols=55 Identities=16% Similarity=0.247 Sum_probs=28.6
Q ss_pred eEECCCCcEEEEeCCCceEEEccCC--cEEEeeecCCccccccceEEEcCC--CcEEEE
Q 023085 38 LTSTKEGHLIICDNANGLHKVSEDG--VENFLSYVNGSKLRFANDVVEASD--GSLYFT 92 (287)
Q Consensus 38 i~~d~dg~l~v~~~~~gi~~~~~~g--~~~~~~~~~~~~~~~~~~l~~d~~--g~l~v~ 92 (287)
++.+++..+++.+...||++-+..| ++.+...........+..|++++. +++|++
T Consensus 50 lt~~~~~~~~~~t~~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyva 108 (685)
T 3f6k_A 50 LTTFHVPLVIMTFGQSKLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLT 108 (685)
T ss_dssp EEEECCCC-----CEEEEEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEE
T ss_pred EccCCCCceEEeecCCeEEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEE
Confidence 3344455555555456788876555 776643222222234467899874 368885
No 348
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=72.24 E-value=65 Score=30.24 Aligned_cols=111 Identities=10% Similarity=0.110 Sum_probs=59.8
Q ss_pred CeEECCC--CcEEEEeCCCceEEEccCC--cEEEeeecCCc--cccccceEEEcCC--CcEEEEcCCCCCCCcceeeeee
Q 023085 37 GLTSTKE--GHLIICDNANGLHKVSEDG--VENFLSYVNGS--KLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDIL 108 (287)
Q Consensus 37 ~i~~d~d--g~l~v~~~~~gi~~~~~~g--~~~~~~~~~~~--~~~~~~~l~~d~~--g~l~v~~~~~~~~~~~~~~~~~ 108 (287)
+|++++. +.+|+++...+|++-+..| ++++....... ....+.+|++++. +.+|++.... .
T Consensus 19 ~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~--~--------- 87 (789)
T 1sqj_A 19 GIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRY--V--------- 87 (789)
T ss_dssp EEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSC--T---------
T ss_pred EEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCcc--C---------
Confidence 7888874 5799998767888877555 55543211000 1235778888874 5788852110 0
Q ss_pred ccCCCceEEEEeCCCCeeEEeecccc---------ccceEEEccC-CCEEEEEeCCCCEEEE
Q 023085 109 EGKPHGQLLKYDPSSNITTLVADGFY---------FANGVALSRD-EDYVVVCESWKFRCRK 160 (287)
Q Consensus 109 ~~~~~~~v~~~~~~~~~~~~~~~~~~---------~~~~i~~~~~-~~~l~v~~~~~~~l~~ 160 (287)
....+.|++-+-....++.+..... ....++++|. .+.+|+... ...|++
T Consensus 88 -~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~-~~gl~~ 147 (789)
T 1sqj_A 88 -GDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTR-TEGIWK 147 (789)
T ss_dssp -TSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECS-SSCEEE
T ss_pred -CCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEec-cCCEEE
Confidence 0001567766544333554432211 1245788764 345777642 345655
No 349
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=71.39 E-value=24 Score=29.90 Aligned_cols=76 Identities=17% Similarity=0.135 Sum_probs=49.5
Q ss_pred CCCEEEEEeCCCC--EEEEEEecCCCCcceeEEeccCC-C--CCc-ceeeCCCCCEEEEEeccchhHHHHhhcchhHHHH
Q 023085 144 DEDYVVVCESWKF--RCRKYWLKGERKGKLETFAENLP-G--APD-NINLAPDGTFWIAIIKLDARRMKILNSSKLIKHV 217 (287)
Q Consensus 144 ~~~~l~v~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~-~--~~~-~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~ 217 (287)
..+.|+..+...+ .|..+|++..++.+.-.+....+ | .+. ++-+-....||+.+..
T Consensus 38 ~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~------------------ 99 (369)
T 3s9j_A 38 GKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNN------------------ 99 (369)
T ss_dssp TEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGG------------------
T ss_pred CcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCC------------------
Confidence 3457888887777 99999987654332222222211 1 232 2444567789999866
Q ss_pred HHhCCccccccccCCCceEEEEECCCCcEEEEEECC
Q 023085 218 LAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDP 253 (287)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~ 253 (287)
..+|..++.+|+.+..+...
T Consensus 100 ----------------~~~i~l~n~~G~~~~k~~~~ 119 (369)
T 3s9j_A 100 ----------------ISRLSSINSQGEIIRNYNFQ 119 (369)
T ss_dssp ----------------GTEEEEECTTCCEEEEEECC
T ss_pred ----------------cceEEEECCCceEEEEEecC
Confidence 24899999999999887553
No 350
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=65.32 E-value=51 Score=26.30 Aligned_cols=144 Identities=13% Similarity=0.086 Sum_probs=73.4
Q ss_pred CCcEEEEe-----cCCeEEEEE--CCceEEEEeeCCccccCeEECCCCcEEEEeCC-------CceEEEc-cCC-cEEEe
Q 023085 4 NGVIYTAT-----RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA-------NGLHKVS-EDG-VENFL 67 (287)
Q Consensus 4 ~G~l~~~~-----~~g~i~~~~--~~~~~~~~~~~~~~~~~i~~d~dg~l~v~~~~-------~gi~~~~-~~g-~~~~~ 67 (287)
++.||+.. ....+.+|+ ++++......+......-+..-+++||+.... ..++++| .+. ++.+.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~ 134 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP 134 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC
Confidence 35566542 125678888 56666654432211101122236788887321 2488899 566 66653
Q ss_pred eecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeeccCC----CceEEEEeCCCCeeEEeecccc--ccceEEE
Q 023085 68 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKP----HGQLLKYDPSSNITTLVADGFY--FANGVAL 141 (287)
Q Consensus 68 ~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~--~~~~i~~ 141 (287)
.... +... ..++. -++.||+..... .... ...+++||+.+++++.+..... ....++.
T Consensus 135 ~~p~--~r~~-~~~~~-~~~~iyv~GG~~------------~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 198 (306)
T 3ii7_A 135 SMLT--QRCS-HGMVE-ANGLIYVCGGSL------------GNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVF 198 (306)
T ss_dssp CCSS--CCBS-CEEEE-ETTEEEEECCEE------------SCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred CCcC--Ccce-eEEEE-ECCEEEEECCCC------------CCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEE
Confidence 3211 1111 22222 367888852110 0001 3469999999888877643211 1123333
Q ss_pred ccCCCEEEEEeCC-----CCEEEEEEecC
Q 023085 142 SRDEDYVVVCESW-----KFRCRKYWLKG 165 (287)
Q Consensus 142 ~~~~~~l~v~~~~-----~~~l~~~~~~~ 165 (287)
. ++ .||+..-. ...+++||+..
T Consensus 199 ~-~~-~i~v~GG~~~~~~~~~~~~yd~~~ 225 (306)
T 3ii7_A 199 V-KD-KIFAVGGQNGLGGLDNVEYYDIKL 225 (306)
T ss_dssp E-TT-EEEEECCEETTEEBCCEEEEETTT
T ss_pred E-CC-EEEEEeCCCCCCCCceEEEeeCCC
Confidence 2 34 47776321 14588888754
No 351
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=63.94 E-value=59 Score=26.60 Aligned_cols=50 Identities=6% Similarity=0.018 Sum_probs=28.0
Q ss_pred eEEEEECCCCcEEEEEEC-CCCccccceEEEEEeCCEEEEEec------CCCeEEEEeC
Q 023085 235 AHLIHVAEDGTIIRNLVD-PTGQLMSFVTSGLQVDNHLYVISL------TSNFIGKVQL 286 (287)
Q Consensus 235 ~~v~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~g~l~i~~~------~~~~i~~~~~ 286 (287)
..+.+||+..+.-..+.. +.. .....+++..+++||+-+= ..+.+.+|++
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~--~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWY--GTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSC--CCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCC--CcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 478999988765554432 211 1121445556888887631 2345666665
No 352
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=61.60 E-value=61 Score=25.99 Aligned_cols=136 Identities=10% Similarity=-0.080 Sum_probs=67.4
Q ss_pred eEEEEeCCCCeeEEeeccc--cccceEEEccCCCEEEEEeCC--------CCEEEEEEecCCCCcceeEEeccCC-CCCc
Q 023085 115 QLLKYDPSSNITTLVADGF--YFANGVALSRDEDYVVVCESW--------KFRCRKYWLKGERKGKLETFAENLP-GAPD 183 (287)
Q Consensus 115 ~v~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~l~v~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~ 183 (287)
.++++|+.+++++.+.... .....++.. ++.||+..-. .+.+++||+...+ ..... ..+ ....
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~---W~~~~-~~p~~r~~ 141 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFK---WGESD-PLPYVVYG 141 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTE---EEECC-CCSSCCBS
T ss_pred ceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCc---EeECC-CCCCcccc
Confidence 4899999988887654321 111233322 3357776421 1458888875432 22111 111 1111
Q ss_pred ceeeCCCCCEEEEEeccchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEECCCCccccceEE
Q 023085 184 NINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTS 263 (287)
Q Consensus 184 ~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (287)
..+.--+++||+....... ......+.++|+..+.-..+..... .....+
T Consensus 142 ~~~~~~~~~iyv~GG~~~~----------------------------~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~ 191 (315)
T 4asc_A 142 HTVLSHMDLVYVIGGKGSD----------------------------RKCLNKMCVYDPKKFEWKELAPMQT--ARSLFG 191 (315)
T ss_dssp CEEEEETTEEEEECCBCTT----------------------------SCBCCCEEEEETTTTEEEECCCCSS--CCBSCE
T ss_pred eeEEEECCEEEEEeCCCCC----------------------------CcccceEEEEeCCCCeEEECCCCCC--chhceE
Confidence 2222246678887654100 1112468889988765554432111 112233
Q ss_pred EEEeCCEEEEEe-cCC----CeEEEEeC
Q 023085 264 GLQVDNHLYVIS-LTS----NFIGKVQL 286 (287)
Q Consensus 264 ~~~~~g~l~i~~-~~~----~~i~~~~~ 286 (287)
++..+++||+-+ ..+ +.+.+||+
T Consensus 192 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~ 219 (315)
T 4asc_A 192 ATVHDGRIIVAAGVTDTGLTSSAEVYSI 219 (315)
T ss_dssp EEEETTEEEEEEEECSSSEEEEEEEEET
T ss_pred EEEECCEEEEEeccCCCCccceEEEEEC
Confidence 444577888753 332 25667665
No 353
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=61.58 E-value=59 Score=25.82 Aligned_cols=135 Identities=12% Similarity=0.112 Sum_probs=67.5
Q ss_pred CeEEEEE--CCceEEEEeeCCc-cccCeEECCCCcEEEEeCC------CceEEEc-cCC-cEEEeeecCCccccccceEE
Q 023085 14 GWIKRLQ--DGTWVNWKFIDSQ-TLVGLTSTKEGHLIICDNA------NGLHKVS-EDG-VENFLSYVNGSKLRFANDVV 82 (287)
Q Consensus 14 g~i~~~~--~~~~~~~~~~~~~-~~~~i~~d~dg~l~v~~~~------~gi~~~~-~~g-~~~~~~~~~~~~~~~~~~l~ 82 (287)
..+.+|+ +++++.....+.. ..++.+. -++++|+.... ..+.++| .+. ++.+.... .+ ..-.+++
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~-r~~~~~~ 152 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMN--TR-RSSVGVG 152 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCS--SC-CBSCEEE
T ss_pred cceEEECCCCCceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCC--Cc-ccCceEE
Confidence 3578888 5666555432211 1112222 36788876321 1378888 556 66654321 11 1112222
Q ss_pred EcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCeeEEeeccc--cccceEEEccCCCEEEEEeCC-----C
Q 023085 83 EASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF--YFANGVALSRDEDYVVVCESW-----K 155 (287)
Q Consensus 83 ~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~l~v~~~~-----~ 155 (287)
+ -++.||+.... ... .......++++|+.+++++.+.... .....++. -++ .||+..-. .
T Consensus 153 ~-~~~~iyv~GG~--------~~~--~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~ 219 (302)
T 2xn4_A 153 V-VGGLLYAVGGY--------DVA--SRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV-LNN-LLYAVGGHDGPLVR 219 (302)
T ss_dssp E-ETTEEEEECCE--------ETT--TTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETT-EEEEECCBSSSSBC
T ss_pred E-ECCEEEEEeCC--------CCC--CCccccEEEEEeCCCCcEEECCCCccccccccEEE-ECC-EEEEECCCCCCccc
Confidence 2 36788885211 000 0001246999999988887764321 11123332 234 47777421 2
Q ss_pred CEEEEEEecC
Q 023085 156 FRCRKYWLKG 165 (287)
Q Consensus 156 ~~l~~~~~~~ 165 (287)
+.+++||++.
T Consensus 220 ~~~~~yd~~~ 229 (302)
T 2xn4_A 220 KSVEVYDPTT 229 (302)
T ss_dssp CCEEEEETTT
T ss_pred ceEEEEeCCC
Confidence 4688999754
No 354
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=55.15 E-value=97 Score=26.28 Aligned_cols=99 Identities=10% Similarity=0.131 Sum_probs=56.2
Q ss_pred cccCeEECCCC-cEEEEeCCCceEEEc-cCC--cEEEeeecCCccccccceEEEcCCCcEEEEcCCCCCCCcceeeeeec
Q 023085 34 TLVGLTSTKEG-HLIICDNANGLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILE 109 (287)
Q Consensus 34 ~~~~i~~d~dg-~l~v~~~~~gi~~~~-~~g--~~~~~~~~~~~~~~~~~~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~ 109 (287)
+. .+++ |+ .|+++ ...+|..++ .+- ....... . . .+.++..-.. ++.+.
T Consensus 90 V~-~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~-~-~---~v~~i~~~~p-~~av~----------------- 142 (388)
T 1xip_A 90 VI-FVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSF-E-K---PVFQLKNVNN-TLVIL----------------- 142 (388)
T ss_dssp EE-EEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEEC-S-S---CEEEEEECSS-EEEEE-----------------
T ss_pred ee-EEEE--CCCEEEEE-cCCcEEEEEchhhhccCcccee-e-c---ceeeEEecCC-CEEEE-----------------
Confidence 55 7888 55 57777 456888888 433 2222111 1 1 1233333222 23332
Q ss_pred cCCCceEEEEeCCCCeeEEeeccccccceEEEccCCCEEEEEeCCCCEEEEEEecCC
Q 023085 110 GKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGE 166 (287)
Q Consensus 110 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~v~~~~~~~l~~~~~~~~ 166 (287)
..+|.|+.++.++++.... ......++|+|+| +.+.. .++.+..|+.++.
T Consensus 143 -~~dG~L~v~dl~~~~~~~~---~~~Vs~v~WSpkG--~~vg~-~dg~i~~~~~~~~ 192 (388)
T 1xip_A 143 -NSVNDLSALDLRTKSTKQL---AQNVTSFDVTNSQ--LAVLL-KDRSFQSFAWRNG 192 (388)
T ss_dssp -ETTSEEEEEETTTCCEEEE---EESEEEEEECSSE--EEEEE-TTSCEEEEEEETT
T ss_pred -ECCCCEEEEEccCCccccc---cCCceEEEEcCCc--eEEEE-cCCcEEEEcCCCc
Confidence 2356788888876655432 2356678999999 44544 4577888887653
No 355
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=43.46 E-value=2e+02 Score=26.55 Aligned_cols=56 Identities=11% Similarity=0.128 Sum_probs=30.8
Q ss_pred cCCeEEEEE-CC-ceEEEEeeCCcc----ccCeEECCCC--cEEEEeC------CCceEEEccCC--cEEEe
Q 023085 12 RDGWIKRLQ-DG-TWVNWKFIDSQT----LVGLTSTKEG--HLIICDN------ANGLHKVSEDG--VENFL 67 (287)
Q Consensus 12 ~~g~i~~~~-~~-~~~~~~~~~~~~----~~~i~~d~dg--~l~v~~~------~~gi~~~~~~g--~~~~~ 67 (287)
..++|++-. .| .|+.+......+ ...|+++|.. ++|++.. ..+|++-...| ++.+.
T Consensus 63 ~~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~ 134 (685)
T 3f6k_A 63 GQSKLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTD 134 (685)
T ss_dssp CEEEEEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEE
T ss_pred cCCeEEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEecc
Confidence 346777776 33 444443222211 1278899743 6888864 34577665445 66653
No 356
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=39.81 E-value=2.2e+02 Score=25.90 Aligned_cols=66 Identities=11% Similarity=0.163 Sum_probs=41.0
Q ss_pred eEEEEeeCCccccCeEECCCCcEEEEeCC--CceEEEc-cC------C-c----EEEeeecCCccccccceEEEcCCCcE
Q 023085 24 WVNWKFIDSQTLVGLTSTKEGHLIICDNA--NGLHKVS-ED------G-V----ENFLSYVNGSKLRFANDVVEASDGSL 89 (287)
Q Consensus 24 ~~~~~~~~~~~~~~i~~d~dg~l~v~~~~--~gi~~~~-~~------g-~----~~~~~~~~~~~~~~~~~l~~d~~g~l 89 (287)
...+...+.+|. ++-++|||+..++... ..+.+++ +. + + ..+.... ..-..|...++|++|..
T Consensus 315 ~~~~iP~pksPH-Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~--e~GlGPlHt~Fd~~G~a 391 (638)
T 3sbq_A 315 FTRYVPVPKNPH-GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP--ELGLGPLHTTFDGRGNA 391 (638)
T ss_dssp SEEEEEESSSCC-CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC--BCCSCEEEEEECSSSEE
T ss_pred eEEEEeCCCCCc-ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec--cCCCcccEEEECCCCce
Confidence 455666778899 9999999986666522 2466666 31 1 1 1111111 11235778899999988
Q ss_pred EEE
Q 023085 90 YFT 92 (287)
Q Consensus 90 ~v~ 92 (287)
|.+
T Consensus 392 YTt 394 (638)
T 3sbq_A 392 YTT 394 (638)
T ss_dssp EEE
T ss_pred Eee
Confidence 886
No 357
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=34.27 E-value=98 Score=27.65 Aligned_cols=53 Identities=11% Similarity=0.245 Sum_probs=34.1
Q ss_pred cEEEEecCCeEEEEE---CCce----EEEEeeC-Ccccc-CeEECCCC-cEEEEeCCCceEEEc
Q 023085 6 VIYTATRDGWIKRLQ---DGTW----VNWKFID-SQTLV-GLTSTKEG-HLIICDNANGLHKVS 59 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~---~~~~----~~~~~~~-~~~~~-~i~~d~dg-~l~v~~~~~gi~~~~ 59 (287)
.+++||.+|+|.++. .... +.+.... +.|+. .|.+++++ .||+++ ..+|.++.
T Consensus 415 V~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s-~~~V~kvp 477 (539)
T 3al9_A 415 VVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMS-ERQVTRVP 477 (539)
T ss_dssp EEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEEC-SSEEEEEE
T ss_pred EEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEe-ccccceee
Confidence 488999999999987 2221 1111112 44542 78888866 688886 45788775
No 358
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=32.04 E-value=2.3e+02 Score=23.91 Aligned_cols=118 Identities=9% Similarity=0.107 Sum_probs=64.1
Q ss_pred CcEEEEecCCeEEEEE-C-Cc-eEEEEeeCCccccCeEECCCCcEEEEeCCCceEEEc-cCC-cEEEeeecCCccccccc
Q 023085 5 GVIYTATRDGWIKRLQ-D-GT-WVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFAN 79 (287)
Q Consensus 5 G~l~~~~~~g~i~~~~-~-~~-~~~~~~~~~~~~~~i~~d~dg~l~v~~~~~gi~~~~-~~g-~~~~~~~~~~~~~~~~~ 79 (287)
..|+++ .++.|..|+ . -. -........... .+..-+. ++.+++..+.|+.++ .++ ...+. ..+.
T Consensus 98 ~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~-~i~~~~p-~~av~~~dG~L~v~dl~~~~~~~~~--------~~Vs 166 (388)
T 1xip_A 98 DQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVF-QLKNVNN-TLVILNSVNDLSALDLRTKSTKQLA--------QNVT 166 (388)
T ss_dssp TEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEE-EEEECSS-EEEEEETTSEEEEEETTTCCEEEEE--------ESEE
T ss_pred CEEEEE-cCCcEEEEEchhhhccCccceeeccee-eEEecCC-CEEEEECCCCEEEEEccCCcccccc--------CCce
Confidence 357777 778899998 2 11 111111111112 3333222 366666556677777 555 44321 3577
Q ss_pred eEEEcCCCcEEEEcCCCCCCCcceeeeeeccCCCceEEEEeCCCCee---EEeec---------cccccceEEEccCCCE
Q 023085 80 DVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT---TLVAD---------GFYFANGVALSRDEDY 147 (287)
Q Consensus 80 ~l~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~---------~~~~~~~i~~~~~~~~ 147 (287)
+++..++| +.++ ...+.+..++++.+++ ..+.. ....+..+.|.+++..
T Consensus 167 ~v~WSpkG-~~vg------------------~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~f 227 (388)
T 1xip_A 167 SFDVTNSQ-LAVL------------------LKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDF 227 (388)
T ss_dssp EEEECSSE-EEEE------------------ETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEE
T ss_pred EEEEcCCc-eEEE------------------EcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeE
Confidence 89999999 4442 2345677777776663 23321 1233456778877765
Q ss_pred EEEEe
Q 023085 148 VVVCE 152 (287)
Q Consensus 148 l~v~~ 152 (287)
+.+..
T Consensus 228 lv~y~ 232 (388)
T 1xip_A 228 LAVFG 232 (388)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 55443
No 359
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=29.39 E-value=1.1e+02 Score=26.99 Aligned_cols=53 Identities=17% Similarity=0.369 Sum_probs=32.9
Q ss_pred cEEEEecCCeEEEEE---CCce--------EEEEe-eCCccccCeEECCCC-cEEEEeCCCceEEEc
Q 023085 6 VIYTATRDGWIKRLQ---DGTW--------VNWKF-IDSQTLVGLTSTKEG-HLIICDNANGLHKVS 59 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~---~~~~--------~~~~~-~~~~~~~~i~~d~dg-~l~v~~~~~gi~~~~ 59 (287)
-+++||.+|+|.++- .+.. +.+.. ..+.|+..|.+++++ .|||++ ..+|.++.
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s-~~~V~~vp 488 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGS-TAGVAQLP 488 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEB-SSCEEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEE-CCeEEEEE
Confidence 388999999999986 2211 11111 123455478888766 688887 45777764
No 360
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=27.11 E-value=1.8e+02 Score=26.80 Aligned_cols=53 Identities=17% Similarity=0.332 Sum_probs=32.8
Q ss_pred cEEEEecCCeEEEEE---CCce---EE-EE-e----eCCccccCeEECCCC-cEEEEeCCCceEEEc
Q 023085 6 VIYTATRDGWIKRLQ---DGTW---VN-WK-F----IDSQTLVGLTSTKEG-HLIICDNANGLHKVS 59 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~---~~~~---~~-~~-~----~~~~~~~~i~~d~dg-~l~v~~~~~gi~~~~ 59 (287)
.+|+||.+|.|.++- .+.. .. +. + ..+.|+..|.+++++ .|||++ ..+|.++.
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t-~~~V~kVP 496 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGS-TAGVAQLP 496 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEB-SSCEEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEE-CCEEEEEE
Confidence 388999999999875 2211 11 11 1 134454478888766 688887 45788876
No 361
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=25.53 E-value=2.3e+02 Score=25.99 Aligned_cols=53 Identities=11% Similarity=0.135 Sum_probs=33.6
Q ss_pred cEEEEecCCeEEEEE--CCceEEEEe----eCCccccCeEECCC---CcEEEEeCCCceEEEc
Q 023085 6 VIYTATRDGWIKRLQ--DGTWVNWKF----IDSQTLVGLTSTKE---GHLIICDNANGLHKVS 59 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~--~~~~~~~~~----~~~~~~~~i~~d~d---g~l~v~~~~~gi~~~~ 59 (287)
-+|+||.+|.|.++- ......+.+ ..+.|+..|.++++ +.||+++ ..+|.++.
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s-~~~V~~vp 478 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGS-NSGVVQAP 478 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEEC-SSCEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEE-cCeEEEEE
Confidence 489999999999975 322222211 12345546777765 4688886 45787776
No 362
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=25.01 E-value=2.2e+02 Score=25.36 Aligned_cols=53 Identities=17% Similarity=0.250 Sum_probs=34.0
Q ss_pred cEEEEecCCeEEEEE-C--Cc---eEEEEeeCCccc-cCeEECCCC-cEEEEeCCCceEEEc
Q 023085 6 VIYTATRDGWIKRLQ-D--GT---WVNWKFIDSQTL-VGLTSTKEG-HLIICDNANGLHKVS 59 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~-~--~~---~~~~~~~~~~~~-~~i~~d~dg-~l~v~~~~~gi~~~~ 59 (287)
.+++||.+|+|.++- . +. .+.+....+.|+ ..|.++++. .||+++ ..+|.++.
T Consensus 402 V~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s-~~~V~~vp 462 (528)
T 3ol2_B 402 IAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMT-QSTLLKVP 462 (528)
T ss_dssp EEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEEC-SSCEEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEe-CCEEEEEE
Confidence 478999999999876 2 21 122222334454 267888765 688876 45788776
No 363
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=23.01 E-value=2.3e+02 Score=25.58 Aligned_cols=53 Identities=19% Similarity=0.256 Sum_probs=33.4
Q ss_pred cEEEEecCCeEEEEE---CCc---eEEEEee----CCccccCeEECCCC-cEEEEeCCCceEEEc
Q 023085 6 VIYTATRDGWIKRLQ---DGT---WVNWKFI----DSQTLVGLTSTKEG-HLIICDNANGLHKVS 59 (287)
Q Consensus 6 ~l~~~~~~g~i~~~~---~~~---~~~~~~~----~~~~~~~i~~d~dg-~l~v~~~~~gi~~~~ 59 (287)
.+++||.+|.|.+.- ++. .....+. ...|+..+.++++. .|||++ ..+|.++.
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s-~~~V~qVP 445 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSS-QWEVSQVP 445 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEEC-SSEEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEe-cceEEEcc
Confidence 478999999999876 221 1111111 23444478888765 688886 45788876
Done!