Query 023090
Match_columns 287
No_of_seqs 232 out of 1429
Neff 5.9
Searched_HMMs 46136
Date Fri Mar 29 08:22:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023090.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023090hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1627 Translation elongation 100.0 1.2E-76 2.7E-81 495.4 9.5 156 129-287 1-160 (160)
2 PF00647 EF1G: Elongation fact 100.0 1.2E-64 2.5E-69 407.0 5.2 107 126-234 1-107 (107)
3 cd03181 GST_C_EFB1gamma GST_C 99.4 1.8E-12 3.8E-17 104.2 7.6 78 2-79 44-121 (123)
4 cd03207 GST_C_8 GST_C family, 99.3 1E-11 2.2E-16 97.3 8.0 68 2-73 34-101 (103)
5 cd03188 GST_C_Beta GST_C famil 99.3 6.5E-12 1.4E-16 99.1 6.9 68 2-72 47-114 (114)
6 cd03187 GST_C_Phi GST_C family 99.3 1.2E-11 2.6E-16 98.4 7.2 70 2-72 49-118 (118)
7 PF00043 GST_C: Glutathione S- 99.3 1.5E-11 3.2E-16 94.5 7.4 64 2-66 32-95 (95)
8 cd03209 GST_C_Mu GST_C family, 99.3 2.1E-11 4.5E-16 98.9 8.5 75 3-79 40-114 (121)
9 cd03196 GST_C_5 GST_C family, 99.2 2E-11 4.3E-16 98.9 7.7 70 2-71 45-114 (115)
10 cd03204 GST_C_GDAP1 GST_C fami 99.2 2.6E-11 5.6E-16 98.8 6.7 67 2-68 33-111 (111)
11 cd03191 GST_C_Zeta GST_C famil 99.2 4.6E-11 1E-15 96.1 7.9 69 3-74 49-119 (121)
12 cd03178 GST_C_Ure2p_like GST_C 99.2 2.3E-11 4.9E-16 96.3 5.8 69 2-72 44-112 (113)
13 cd03180 GST_C_2 GST_C family, 99.2 5.2E-11 1.1E-15 93.4 6.8 64 2-68 47-110 (110)
14 cd03185 GST_C_Tau GST_C family 99.2 7.3E-11 1.6E-15 95.2 7.7 74 2-75 39-116 (126)
15 cd03210 GST_C_Pi GST_C family, 99.2 7.6E-11 1.6E-15 96.5 7.9 75 3-79 40-117 (126)
16 cd03186 GST_C_SspA GST_N famil 99.2 8.7E-11 1.9E-15 92.6 7.9 68 2-71 39-106 (107)
17 cd03189 GST_C_GTT1_like GST_C 99.2 6.4E-11 1.4E-15 94.7 7.1 62 2-66 58-119 (119)
18 cd03198 GST_C_CLIC GST_C famil 99.2 9.3E-11 2E-15 98.6 8.2 73 2-74 33-124 (134)
19 cd03177 GST_C_Delta_Epsilon GS 99.2 7.3E-11 1.6E-15 94.9 7.3 68 2-72 42-110 (118)
20 PLN02473 glutathione S-transfe 99.1 7.4E-11 1.6E-15 103.9 6.9 73 2-74 139-211 (214)
21 PLN02395 glutathione S-transfe 99.1 9E-11 1.9E-15 103.3 7.4 74 3-76 139-212 (215)
22 cd03206 GST_C_7 GST_C family, 99.1 9E-11 1.9E-15 91.8 6.5 64 2-68 37-100 (100)
23 cd03190 GST_C_ECM4_like GST_C 99.1 1.2E-10 2.7E-15 97.6 7.3 73 2-74 41-118 (142)
24 cd03182 GST_C_GTT2_like GST_C 99.1 1.1E-10 2.4E-15 93.0 6.5 65 2-68 53-117 (117)
25 cd03208 GST_C_Alpha GST_C fami 99.1 1.9E-10 4E-15 96.2 8.1 74 3-78 44-119 (137)
26 PRK13972 GSH-dependent disulfi 99.1 1.4E-10 3E-15 102.7 7.6 74 2-78 136-209 (215)
27 cd03183 GST_C_Theta GST_C fami 99.1 1.9E-10 4E-15 93.2 7.8 71 2-74 49-122 (126)
28 PRK10542 glutathionine S-trans 99.1 2E-10 4.3E-15 99.9 7.0 70 2-74 128-197 (201)
29 PF13410 GST_C_2: Glutathione 99.1 2.6E-10 5.6E-15 83.3 6.4 60 2-61 10-69 (69)
30 cd03184 GST_C_Omega GST_C fami 99.1 2.6E-10 5.7E-15 92.8 7.0 75 2-76 36-115 (124)
31 cd03203 GST_C_Lambda GST_C fam 99.1 3.8E-10 8.3E-15 91.9 8.0 71 3-74 35-111 (120)
32 TIGR01262 maiA maleylacetoacet 99.1 3.4E-10 7.4E-15 99.1 7.7 70 3-75 134-205 (210)
33 cd03201 GST_C_DHAR GST_C famil 99.1 3.8E-10 8.3E-15 92.6 7.5 73 2-74 34-110 (121)
34 PRK10357 putative glutathione 99.0 4.4E-10 9.6E-15 98.1 7.3 72 2-74 129-200 (202)
35 PTZ00057 glutathione s-transfe 99.0 5E-10 1.1E-14 98.8 7.0 73 2-76 127-201 (205)
36 PRK09481 sspA stringent starva 99.0 1.2E-09 2.5E-14 96.7 7.8 70 3-74 132-202 (211)
37 PLN02378 glutathione S-transfe 98.9 1.4E-09 2.9E-14 96.8 5.6 77 3-79 123-204 (213)
38 cd03194 GST_C_3 GST_C family, 98.9 5E-09 1.1E-13 84.8 7.6 65 3-73 46-113 (114)
39 cd03195 GST_C_4 GST_C family, 98.9 4.9E-09 1.1E-13 84.6 7.5 65 3-73 47-112 (114)
40 cd03193 GST_C_Metaxin GST_C fa 98.9 3.5E-09 7.7E-14 81.0 6.1 62 2-63 23-88 (88)
41 cd03200 GST_C_JTV1 GST_C famil 98.9 4.5E-09 9.7E-14 82.9 6.6 58 2-65 39-96 (96)
42 PRK11752 putative S-transferas 98.9 4.7E-09 1E-13 96.8 7.8 74 2-75 182-259 (264)
43 cd03179 GST_C_1 GST_C family, 98.9 3.6E-09 7.7E-14 82.3 5.5 59 2-63 47-105 (105)
44 cd00299 GST_C_family Glutathio 98.8 6.4E-09 1.4E-13 79.1 6.1 61 2-62 40-100 (100)
45 PF14497 GST_C_3: Glutathione 98.8 6.8E-09 1.5E-13 81.2 5.7 59 2-64 39-99 (99)
46 TIGR00862 O-ClC intracellular 98.8 1.6E-08 3.6E-13 92.4 7.8 73 3-75 128-221 (236)
47 cd03202 GST_C_etherase_LigE GS 98.8 2.4E-08 5.2E-13 81.9 7.3 62 2-64 62-123 (124)
48 COG0625 Gst Glutathione S-tran 98.7 2E-08 4.3E-13 88.5 7.1 65 2-69 135-199 (211)
49 PLN02817 glutathione dehydroge 98.7 2.9E-08 6.3E-13 92.1 7.8 73 3-75 176-252 (265)
50 cd03205 GST_C_6 GST_C family, 98.7 2.8E-08 6E-13 77.6 5.7 58 2-62 41-98 (98)
51 cd03192 GST_C_Sigma_like GST_C 98.7 2.8E-08 6.1E-13 77.7 5.0 59 2-62 43-104 (104)
52 PLN02907 glutamate-tRNA ligase 98.7 3.9E-08 8.4E-13 102.6 7.3 65 3-67 95-159 (722)
53 PRK15113 glutathione S-transfe 98.6 6.9E-08 1.5E-12 85.6 7.1 68 2-75 141-209 (214)
54 KOG0867 Glutathione S-transfer 98.6 6.8E-08 1.5E-12 87.4 6.9 72 2-73 137-208 (226)
55 PRK10387 glutaredoxin 2; Provi 98.6 3.6E-08 7.8E-13 86.3 4.7 63 2-69 146-208 (210)
56 KOG4420 Uncharacterized conser 98.6 1.2E-07 2.6E-12 87.4 6.3 73 3-75 210-288 (325)
57 KOG1695 Glutathione S-transfer 98.4 1.1E-06 2.4E-11 79.0 7.8 74 3-77 128-203 (206)
58 cd03212 GST_C_Metaxin1_3 GST_C 98.4 8.3E-07 1.8E-11 74.5 6.2 62 3-64 69-134 (137)
59 cd03211 GST_C_Metaxin2 GST_C f 98.3 1E-06 2.3E-11 72.7 5.2 59 3-62 62-125 (126)
60 TIGR02182 GRXB Glutaredoxin, G 98.3 7E-07 1.5E-11 79.2 4.0 60 3-68 146-206 (209)
61 cd03197 GST_C_mPGES2 GST_C fam 98.2 3E-06 6.5E-11 72.6 6.5 51 11-64 93-145 (149)
62 KOG0406 Glutathione S-transfer 98.1 1.1E-05 2.3E-10 73.7 7.4 74 2-75 133-212 (231)
63 KOG0868 Glutathione S-transfer 98.0 1.1E-05 2.3E-10 71.1 5.1 70 3-75 137-208 (217)
64 COG0435 ECM4 Predicted glutath 97.6 2.2E-05 4.8E-10 73.2 2.1 70 3-72 210-284 (324)
65 KOG2903 Predicted glutathione 97.4 4.4E-05 9.5E-10 70.7 1.1 70 3-72 208-286 (319)
66 KOG1422 Intracellular Cl- chan 97.3 0.00027 5.9E-09 63.6 4.2 72 3-74 128-205 (221)
67 KOG1147 Glutamyl-tRNA syntheta 96.3 0.0021 4.5E-08 65.0 2.2 72 2-75 92-165 (712)
68 PF14834 GST_C_4: Glutathione 96.2 0.021 4.6E-07 47.0 7.1 65 3-73 48-113 (117)
69 KOG4244 Failed axon connection 95.9 0.0056 1.2E-07 57.0 2.6 62 2-64 207-272 (281)
70 KOG3027 Mitochondrial outer me 93.9 0.098 2.1E-06 47.5 5.0 64 2-65 181-248 (257)
71 PF04399 Glutaredoxin2_C: Glut 93.3 0.19 4.2E-06 42.3 5.5 61 2-67 63-123 (132)
72 KOG1668 Elongation factor 1 be 93.3 0.065 1.4E-06 49.0 2.8 60 4-70 10-69 (231)
73 KOG3028 Translocase of outer m 90.5 0.66 1.4E-05 44.3 6.2 63 3-65 168-234 (313)
74 cd03199 GST_C_GRX2 GST_C famil 90.5 0.75 1.6E-05 38.6 5.9 60 3-67 65-124 (128)
75 KOG3029 Glutathione S-transfer 86.9 1.3 2.8E-05 42.2 5.4 49 15-64 306-354 (370)
76 PF09868 DUF2095: Uncharacteri 56.2 5.8 0.00013 32.9 1.1 27 126-152 2-28 (128)
77 KOG0867 Glutathione S-transfer 47.9 1.5 3.2E-05 39.6 -4.0 73 3-79 96-169 (226)
78 COG2999 GrxB Glutaredoxin 2 [P 38.9 44 0.00096 30.0 4.0 63 2-69 146-208 (215)
79 PF13200 DUF4015: Putative gly 31.0 37 0.0008 32.7 2.4 70 171-246 137-220 (316)
80 PF11280 DUF3081: Protein of u 23.0 1.1E+02 0.0025 23.5 3.4 35 167-205 34-78 (79)
81 PF00392 GntR: Bacterial regul 21.8 1E+02 0.0022 21.7 2.8 32 4-35 3-35 (64)
No 1
>KOG1627 consensus Translation elongation factor EF-1 gamma [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.2e-76 Score=495.41 Aligned_cols=156 Identities=51% Similarity=0.930 Sum_probs=150.8
Q ss_pred CCCCCCCCCCcchhhhhhhhccCCCcchhhhhhhhhhccCCCCceEEEEeeecCCCcceeEecccchhhHHHhhhhhhhh
Q 023090 129 NPLDLLPPSKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKY 208 (287)
Q Consensus 129 ~pl~~lp~s~f~ld~~Kr~YsN~~~~~~~~a~p~fwe~~d~e~~Slw~~~Yky~~el~~~fms~Nli~Gf~qRl~~~rK~ 208 (287)
|||++||+|+|+||+|||+|||+|| +.+|||||||||||||||||+|+||||+||+++||||||||||||||+++|||
T Consensus 1 ~pl~~lp~~~Fvldd~kr~ySn~dt--~~~a~P~f~e~~d~e~ys~w~~~Yky~eeL~~~fms~nli~g~~qrl~~~rk~ 78 (160)
T KOG1627|consen 1 DPLDLLPKSTFVLDDWKRKYSNEDT--REVALPWFWEHFDPEGYSLWKVDYKYNEELTLTFMSCNLIGGFFQRLDKSRKY 78 (160)
T ss_pred CchhhCCCCccchhhhhhhhccccc--ccccchHHHHHhCcccceeeeccccCchHHHHHHHHhhhhhHHHHHHHHHHHh
Confidence 7999999999999999999999999 77999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEEeeCCCcceEEEEEEeCCCCCcccc--cccccccceeeEEcCCCCHHHHHHHHHHHhcCCCC--CCeeecccc
Q 023090 209 AFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVM--DECYDMELYDWKKADISDEEQKERVNQMIEDHEPF--EGEALLDAK 284 (287)
Q Consensus 209 ~Fg~~~v~G~~~~~~I~G~w~~rG~~~~~~~~--~~~~d~e~y~~~kld~~~~e~k~~v~~~~~w~~~~--~g~~~~~gk 284 (287)
+||||+|+|+|++++|+|+|+|||||+ +|.| |++||||||+||||||+++|+|++|++||+|++++ .||.|+|||
T Consensus 79 ~f~~~~~~g~~~~~~i~g~~~~rg~el-a~~~spDwq~D~EsY~~tKLD~~see~k~~V~ey~sWeg~f~~~Gkaf~qgK 157 (160)
T KOG1627|consen 79 AFGSMVLFGENGNSTISGAWVFRGQEL-APAFSPDWQPDYESYTWTKLDPGSEETKELVNEYFSWEGPFEGNGKAFNDGK 157 (160)
T ss_pred hheeEEEeccCCCCcceEEEEEecccc-ccccCccccccccceeeeecCCCCHHHHHHHHHHHhhcccccccchhhhccc
Confidence 999999999999999999999999997 3366 99999999999999999999999999999999975 569999999
Q ss_pred ccC
Q 023090 285 CFK 287 (287)
Q Consensus 285 vfK 287 (287)
|||
T Consensus 158 i~K 160 (160)
T KOG1627|consen 158 IFK 160 (160)
T ss_pred ccC
Confidence 998
No 2
>PF00647 EF1G: Elongation factor 1 gamma, conserved domain; InterPro: IPR001662 Translation elongation factors are responsible for two main processes during protein synthesis on the ribosome [, , ]. EF1A (or EF-Tu) is responsible for the selection and binding of the cognate aminoacyl-tRNA to the A-site (acceptor site) of the ribosome. EF2 (or EF-G) is responsible for the translocation of the peptidyl-tRNA from the A-site to the P-site (peptidyl-tRNA site) of the ribosome, thereby freeing the A-site for the next aminoacyl-tRNA to bind. Elongation factors are responsible for achieving accuracy of translation and both EF1A and EF2 are remarkably conserved throughout evolution. Elongation factor EF1B (also known as EF-Ts or EF-1beta/gamma/delta) is a nucleotide exchange factor that is required to regenerate EF1A from its inactive form (EF1A-GDP) to its active form (EF1A-GTP). EF1A is then ready to interact with a new aminoacyl-tRNA to begin the cycle again. EF1B is more complex in eukaryotes than in bacteria, and can consist of three subunits: EF1B-alpha (or EF-1beta), EF1B-gamma (or EF-1gamma) and EF1B-beta (or EF-1delta) []. This entry represents a conserved domain usually found near the C terminus of EF1B-gamma chains, a peptide of 410-440 residues. The gamma chain appears to play a role in anchoring the EF1B complex to the beta and delta chains and to other cellular components. More information about these proteins can be found at Protein of the Month: Elongation Factors [].; GO: 0003746 translation elongation factor activity, 0006414 translational elongation, 0005853 eukaryotic translation elongation factor 1 complex; PDB: 1PBU_A.
Probab=100.00 E-value=1.2e-64 Score=406.98 Aligned_cols=107 Identities=59% Similarity=1.183 Sum_probs=83.4
Q ss_pred CCCCCCCCCCCCCcchhhhhhhhccCCCcchhhhhhhhhhccCCCCceEEEEeeecCCCcceeEecccchhhHHHhhhhh
Q 023090 126 KPKNPLDLLPPSKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLA 205 (287)
Q Consensus 126 K~k~pl~~lp~s~f~ld~~Kr~YsN~~~~~~~~a~p~fwe~~d~e~~Slw~~~Yky~~el~~~fms~Nli~Gf~qRl~~~ 205 (287)
|+|||||+||||+|+||+|||+|||+|| +++||||||||||+||||||+|+|+||+|||++|||||||||||||||++
T Consensus 1 K~k~Pl~~lp~s~f~lD~wKr~YSN~d~--~~~a~p~Fwe~~d~eg~Slw~~~Yky~~El~~~fmt~Nli~Gf~QRle~~ 78 (107)
T PF00647_consen 1 KPKNPLDLLPKSTFVLDEWKRKYSNEDT--RTVAMPWFWENFDPEGYSLWFCDYKYNDELTMTFMTCNLIGGFFQRLEKL 78 (107)
T ss_dssp ----GGGSS----S-HHHHHHHHHHS-G--GGTHHHHHHSS--TTT-EEEEE--S-GGG---STTHHHHHHHHHHHGGGT
T ss_pred CCCChHHHCCCCCCCHHHhhhhhcCCCc--hhhHHHHHHHhCCccccEEEEEecCChhhhccceeehhHHHHHHHHHHHH
Confidence 6899999999999999999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred hhhcceeEEEEeeCCCcceEEEEEEeCCC
Q 023090 206 RKYAFGKMLIIGNEPPYKVKGLWLFRGPE 234 (287)
Q Consensus 206 rK~~Fg~~~v~G~~~~~~I~G~w~~rG~~ 234 (287)
||||||+|+|||+++++.|+|||||||||
T Consensus 79 rK~aFg~~~v~G~~~~~~I~Gvwv~rG~e 107 (107)
T PF00647_consen 79 RKYAFGSMSVFGEDNNSDISGVWVFRGQE 107 (107)
T ss_dssp GGGEEE--EEES-STT-EEEEEEEESSSS
T ss_pred hhhheeEEEEEecCCCCceEEEEEEecCC
Confidence 99999999999999999999999999997
No 3
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.36 E-value=1.8e-12 Score=104.24 Aligned_cols=78 Identities=38% Similarity=0.635 Sum_probs=69.1
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhccccccc
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGDFKQAE 79 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~~~~~~ 79 (287)
.+.+.|+.||++|..++||+|+++|+|||++++.+.++....++..++..+|++.+|+++|.++|+|++++.+.++|+
T Consensus 44 ~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~ 121 (123)
T cd03181 44 ELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLGFTYVFDKEWRAKYPNVTRWFNTVVNQPIFKAVFGEVKLCE 121 (123)
T ss_pred HHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHHHHHHcCHHHHHhChHHHHHHHHHHcCHHHHHHcCCCCcCC
Confidence 467789999999999999999999999999999998876554554456789999999999999999999999999887
No 4
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.29 E-value=1e-11 Score=97.32 Aligned_cols=68 Identities=25% Similarity=0.427 Sum_probs=60.4
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhc
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 73 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~ 73 (287)
++.+.++.||++|++++||+|+++|+|||++++.+.++... + ++..+|+|++|+++|.++|+|+.++.
T Consensus 34 ~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~--~--~~~~~p~l~~w~~~~~~~p~~~~~~~ 101 (103)
T cd03207 34 SYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQF--G--LLPERPAFDAYIARITDRPAFQRAAA 101 (103)
T ss_pred hHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHc--C--CCCCChHHHHHHHHHHcCHHHHHHhc
Confidence 47789999999999999999999999999999999887643 2 35789999999999999999998764
No 5
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.29 E-value=6.5e-12 Score=99.10 Aligned_cols=68 Identities=25% Similarity=0.450 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhh
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFL 72 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl 72 (287)
.+.+.|..||++|.+++||+|+++|+|||++++.+.++....++ ...||+|.+|+++|.++|+|++++
T Consensus 47 ~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 47 RLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVLRWAPGVGLD---LSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHHHHHhhcCCC---hhhChHHHHHHHHHHhCHHhHhhC
Confidence 46788999999999999999999999999999998876433333 468999999999999999999864
No 6
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.26 E-value=1.2e-11 Score=98.36 Aligned_cols=70 Identities=29% Similarity=0.422 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhh
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFL 72 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl 72 (287)
.+.+.|+.||++|++++||+|+++|+|||++++++.++... .....+..||+|.+|+++|.++|++++++
T Consensus 49 ~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~-~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 49 KLKKVLDVYEARLSKSKYLAGDSFTLADLSHLPYLQYLMAT-PFAKLFDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHHHHHHcccCcccCCCCccHHHHHHHHHHHHHHHc-cchhhhhcCchHHHHHHHHHhCHHHHhhC
Confidence 46788999999999999999999999999999998776532 12223678999999999999999998764
No 7
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.26 E-value=1.5e-11 Score=94.49 Aligned_cols=64 Identities=25% Similarity=0.382 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcCh
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQP 66 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P 66 (287)
.+.+.|..+|++|.+++||+|+++|+|||++++.+.++.....+.. ...||+|.+|+++|.++|
T Consensus 32 ~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~-~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 32 KVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPDFL-FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTTTT-HTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCCcc-cccCHHHHHHHHHHHcCC
Confidence 4678899999999999999999999999999999998876543321 389999999999999998
No 8
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.26 E-value=2.1e-11 Score=98.90 Aligned_cols=75 Identities=15% Similarity=0.287 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhccccccc
Q 023090 3 MLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGDFKQAE 79 (287)
Q Consensus 3 l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~~~~~~ 79 (287)
+.+.|+.||++|.+++||+|+++|+|||++++.+.++... .......||+|.+|+++|.++|++++++...+.++
T Consensus 40 ~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~--~~~~~~~~P~l~~~~~rv~~~p~vk~~~~~~~~~~ 114 (121)
T cd03209 40 LPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIF--EPDCLDAFPNLKDFLERFEALPKISAYMKSDRFIK 114 (121)
T ss_pred HHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHh--CccccccChHHHHHHHHHHHCHHHHHHHhcccCcC
Confidence 5678999999999999999999999999999988886532 22336789999999999999999999998876655
No 9
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.25 E-value=2e-11 Score=98.90 Aligned_cols=70 Identities=20% Similarity=0.219 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHh
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKF 71 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~v 71 (287)
.+.+.|+.||++|++++||+|+++|+|||++++.+.++.........+..||+|.+|+++|.++|+|+++
T Consensus 45 ~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~~~~~~~~~~~~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 45 QAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQFAHVDPKWFDQSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred HHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHHHHHhhhcccCcccCHHHHHHHHHHHcChHHHhh
Confidence 4678999999999999999999999999999998766432211111147899999999999999999985
No 10
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.21 E-value=2.6e-11 Score=98.84 Aligned_cols=67 Identities=25% Similarity=0.349 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHHhcCCC----------ccccCCCCHHHHHHHHHHHHHHHhhcCccc--cccCccHHHHHHHHHcChhH
Q 023090 2 LMLSTLDALNIHLASNT----------YLVGHSVTLADIVMICNLYYGFKLIMTKSF--TSEFPHVERYFWTVANQPKI 68 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~t----------FLvGeriTlADI~la~~L~~~~~~~~d~~~--r~~yPnl~rWf~ti~~~P~f 68 (287)
++.+.|+.||++|.+++ ||+|+++|+|||++++.+.++....++... +..||+|.+|+++|.++|+|
T Consensus 33 ~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~P~l~~w~~rv~aRpsf 111 (111)
T cd03204 33 ELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSRRYWGNGKRPNLEAYFERVLQRESF 111 (111)
T ss_pred HHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCccccccccccChHHHHHHHHHHcCCCC
Confidence 46788999999998753 999999999999999999887654444321 46899999999999999975
No 11
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.21 E-value=4.6e-11 Score=96.13 Aligned_cols=69 Identities=23% Similarity=0.335 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHhcC--CCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhcc
Q 023090 3 MLSTLDALNIHLAS--NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGD 74 (287)
Q Consensus 3 l~~~L~~LE~~L~~--~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~ 74 (287)
+.+.|..||++|.+ .+||+|+++|+|||++++.+.++....++ ...||+|.+|+++|.++|+|++++..
T Consensus 49 ~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~~~~~~~ 119 (121)
T cd03191 49 IARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARRFGVD---LSPYPTIARINEACLELPAFQAAHPD 119 (121)
T ss_pred HHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHHhCCC---cccCcHHHHHHHHHHhChhHHHhCcC
Confidence 57789999999984 57999999999999999998876544333 47899999999999999999998753
No 12
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.20 E-value=2.3e-11 Score=96.33 Aligned_cols=69 Identities=23% Similarity=0.321 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhh
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFL 72 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl 72 (287)
++.+.|+.||++|++++||+|+++|+|||++++.+.+...... .+...||+|.+|+++|.++|+|++++
T Consensus 44 ~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~~--~~~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 44 EAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRRLEWIGI--DDLDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHHHHhccc--cchhhchHHHHHHHHHhhCHHHHHhc
Confidence 4678899999999999999999999999999998888643322 24678999999999999999999864
No 13
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.18 E-value=5.2e-11 Score=93.35 Aligned_cols=64 Identities=31% Similarity=0.556 Sum_probs=54.1
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhH
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKI 68 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~f 68 (287)
.+.+.|+.||++|.+++||+|+++|+|||++++.+........ .+..||+|.+|+++|.++|+|
T Consensus 47 ~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~~~~~~~~~---~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 47 AWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSAYRWFELPI---ERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHHHHHHccc---ccccCchHHHHHHHHHhCCCC
Confidence 4678899999999999999999999999999988854333222 267899999999999999975
No 14
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.18 E-value=7.3e-11 Score=95.18 Aligned_cols=74 Identities=16% Similarity=0.149 Sum_probs=61.5
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHh--hcCcc--ccccCccHHHHHHHHHcChhHHHhhccc
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKL--IMTKS--FTSEFPHVERYFWTVANQPKIKKFLGDF 75 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~--~~d~~--~r~~yPnl~rWf~ti~~~P~fk~vl~~~ 75 (287)
.+.+.|+.||++|.+++||+|+++|+|||++++.+.++... ..+.. .+..||++.+|+++|.++|+|++++...
T Consensus 39 ~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 116 (126)
T cd03185 39 EALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEEVGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPDR 116 (126)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHcCccccCcccCchHHHHHHHHHhccHHHHhCCCH
Confidence 46788999999999999999999999999999998886432 12222 2578999999999999999999987664
No 15
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.18 E-value=7.6e-11 Score=96.49 Aligned_cols=75 Identities=19% Similarity=0.341 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHhcC---CCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhccccccc
Q 023090 3 MLSTLDALNIHLAS---NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGDFKQAE 79 (287)
Q Consensus 3 l~~~L~~LE~~L~~---~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~~~~~~ 79 (287)
+.+.|..||++|.+ ++||+|+++|+|||++++.+.++... .......||+|.+|+++|.++|+|++++...+.+.
T Consensus 40 ~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~--~~~~~~~~P~l~~~~~rv~~~p~v~~~~~~~~~~~ 117 (126)
T cd03210 40 LPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVL--APGCLDAFPLLKAFVERLSARPKLKAYLESDAFKN 117 (126)
T ss_pred HHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHh--ChHhhhcChHHHHHHHHHHhCcHHHHHHhCcCCCC
Confidence 56789999999985 58999999999999999988776432 22236789999999999999999999998887665
No 16
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.17 E-value=8.7e-11 Score=92.57 Aligned_cols=68 Identities=16% Similarity=0.166 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHh
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKF 71 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~v 71 (287)
.+.+.|..||++|.+++||+|+++|+|||++++.+.++.. ++......+|+|.+|+++|.++|+|+++
T Consensus 39 ~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~--~~~~~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 39 ELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLPA--LGIELPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHHH--cCCCCcccchHHHHHHHHHHCCHHHHHh
Confidence 3677899999999999999999999999999998755432 2322235799999999999999999875
No 17
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.17 E-value=6.4e-11 Score=94.74 Aligned_cols=62 Identities=27% Similarity=0.413 Sum_probs=54.1
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcCh
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQP 66 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P 66 (287)
++.+.|+.||++|.+++||+|+++|+|||++++.+.++..... .+..||+|.+|+++|.++|
T Consensus 58 ~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 58 ELKKHLDFLEDRLAKKGYFVGDKLTAADIMMSFPLEAALARGP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred HHHHHHHHHHHHHccCCCCCCCCCCHHHHHHHHHHHHHHHcCc---ccccCchHHHHHHHHhcCC
Confidence 4678899999999999999999999999999999888754322 3679999999999999986
No 18
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.17 E-value=9.3e-11 Score=98.61 Aligned_cols=73 Identities=19% Similarity=0.202 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHhcC----------------CCccccCCCCHHHHHHHHHHHHHHHh---hcCccccccCccHHHHHHHH
Q 023090 2 LMLSTLDALNIHLAS----------------NTYLVGHSVTLADIVMICNLYYGFKL---IMTKSFTSEFPHVERYFWTV 62 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~----------------~tFLvGeriTlADI~la~~L~~~~~~---~~d~~~r~~yPnl~rWf~ti 62 (287)
.+.+.|..||.+|.+ ++||+|+++|+|||++++.+.++... ..+-.+...||||.+|+++|
T Consensus 33 ~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~~~~P~L~aw~~ri 112 (134)
T cd03198 33 GLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIPADLTGLWRYLKNA 112 (134)
T ss_pred HHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCccccCHHHHHHHHHH
Confidence 467889999999987 67999999999999999998866321 11222347899999999999
Q ss_pred HcChhHHHhhcc
Q 023090 63 ANQPKIKKFLGD 74 (287)
Q Consensus 63 ~~~P~fk~vl~~ 74 (287)
.++|+|+.++..
T Consensus 113 ~aRPsfk~t~~~ 124 (134)
T cd03198 113 YQREEFTNTCPA 124 (134)
T ss_pred HCCHHHHHHcCC
Confidence 999999998754
No 19
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.17 E-value=7.3e-11 Score=94.88 Aligned_cols=68 Identities=21% Similarity=0.352 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHH-hhcCccccccCccHHHHHHHHHcChhHHHhh
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFK-LIMTKSFTSEFPHVERYFWTVANQPKIKKFL 72 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~-~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl 72 (287)
++.+.|+.||++|++++||+|+++|+|||++++.+.++.. ..++ ...||+|.+|+++|.++|+|++..
T Consensus 42 ~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 42 KLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEALLPLD---LSKYPNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred HHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHHhcCCC---hhhCchHHHHHHHHHcccchHHHH
Confidence 4678899999999989999999999999999999988753 2222 467999999999999999999854
No 20
>PLN02473 glutathione S-transferase
Probab=99.14 E-value=7.4e-11 Score=103.95 Aligned_cols=73 Identities=23% Similarity=0.349 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhcc
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGD 74 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~ 74 (287)
++.+.|+.||++|++++||+|+++|+|||++++.+.++....-...+++.||+|.+|+++|.++|+|++++..
T Consensus 139 ~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~~~~ 211 (214)
T PLN02473 139 KFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211 (214)
T ss_pred HHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHHHhcChhhHHHHHH
Confidence 3567899999999999999999999999999999877543211123467899999999999999999998754
No 21
>PLN02395 glutathione S-transferase
Probab=99.14 E-value=9e-11 Score=103.32 Aligned_cols=74 Identities=23% Similarity=0.365 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhcccc
Q 023090 3 MLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGDFK 76 (287)
Q Consensus 3 l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~~~ 76 (287)
+.+.++.||++|.+++||+|+++|+|||++++.+.+.........++..||+|.+|+++|.++|+|+++++...
T Consensus 139 ~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~rp~~k~~~~~~~ 212 (215)
T PLN02395 139 LAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISSRPAWKEVLAKYS 212 (215)
T ss_pred HHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHHHHHcChHHHHHHHHhc
Confidence 56788999999999999999999999999998876653211122246789999999999999999999987653
No 22
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.14 E-value=9e-11 Score=91.82 Aligned_cols=64 Identities=20% Similarity=0.288 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhH
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKI 68 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~f 68 (287)
++.+.|+.||++|++++|++|+++|+|||++++.+.+.....+ .+..||+|.+|+++|.++|+|
T Consensus 37 ~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~---~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 37 RAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPEGGV---DLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhccCC---ChhhCcHHHHHHHHHHhCcCC
Confidence 4677899999999999999999999999999988866443222 257899999999999999975
No 23
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.13 E-value=1.2e-10 Score=97.57 Aligned_cols=73 Identities=21% Similarity=0.298 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHh---hc--CccccccCccHHHHHHHHHcChhHHHhhcc
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKL---IM--TKSFTSEFPHVERYFWTVANQPKIKKFLGD 74 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~---~~--d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~ 74 (287)
++.+.|+.||++|.+++||+|+++|+|||++++.+.++... .. +......||+|.+|+++|.++|+|++++..
T Consensus 41 ~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~ 118 (142)
T cd03190 41 ELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNF 118 (142)
T ss_pred HHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhhCchHHHHHHHHhcCchHhhhcCH
Confidence 46678999999999999999999999999999988765321 11 112246899999999999999999998765
No 24
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.13 E-value=1.1e-10 Score=92.98 Aligned_cols=65 Identities=23% Similarity=0.383 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhH
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKI 68 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~f 68 (287)
.+.+.|..||++|.+++|++|+++|+|||++++.+.++... +.+++..||+|.+|++++.++|++
T Consensus 53 ~l~~~l~~le~~L~~~~~l~gd~~t~aDi~l~~~~~~~~~~--~~~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 53 RAADFLAYLDTRLAGSPYVAGDRFTIADITAFVGLDFAKVV--KLRVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHhHHHHhc--CCCCccccHHHHHHHHHHHhccCC
Confidence 46788999999999999999999999999999999876543 333467899999999999999974
No 25
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.12 E-value=1.9e-10 Score=96.21 Aligned_cols=74 Identities=26% Similarity=0.365 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHhc--CCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhcccccc
Q 023090 3 MLSTLDALNIHLA--SNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGDFKQA 78 (287)
Q Consensus 3 l~~~L~~LE~~L~--~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~~~~~ 78 (287)
+.+.|+.||++|. +++||+|+++|+|||++++.+.++... .......||+|.+|+++|.++|++++++......
T Consensus 44 ~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~--~~~~l~~~P~l~~~~~rv~~~P~vk~~~~~~~~~ 119 (137)
T cd03208 44 KNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEEL--DPSLLSDFPLLQAFKTRISNLPTIKKFLQPGSPR 119 (137)
T ss_pred HHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHh--chhhhccChHHHHHHHHHHcCHHHHHHHhcCCCC
Confidence 4688999999998 678999999999999999999886432 2334678999999999999999999999766443
No 26
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.12 E-value=1.4e-10 Score=102.73 Aligned_cols=74 Identities=16% Similarity=0.178 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhcccccc
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGDFKQA 78 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~~~~~ 78 (287)
.+.+.|..||++|.+++||+|+++|+|||++++.+.......++ ...||+|.+|+++|.++|+|++++....+-
T Consensus 136 ~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~~---~~~~P~l~~w~~r~~~rp~~~~~~~~~~~~ 209 (215)
T PRK13972 136 ETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRID---LAMYPAVKNWHERIRSRPATGQALLKAQLG 209 (215)
T ss_pred HHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHhhcCCc---chhCHHHHHHHHHHHhCHHHHHHHHHhccc
Confidence 35678999999999999999999999999998877544333333 578999999999999999999987655443
No 27
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.12 E-value=1.9e-10 Score=93.23 Aligned_cols=71 Identities=15% Similarity=0.239 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHh-cCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHc--ChhHHHhhcc
Q 023090 2 LMLSTLDALNIHL-ASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVAN--QPKIKKFLGD 74 (287)
Q Consensus 2 ~l~~~L~~LE~~L-~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~--~P~fk~vl~~ 74 (287)
.+.+.+..||++| .+++|++|+++|+|||++++.+.++....+ +.+..||+|.+|+++|.+ +|+|+++++-
T Consensus 49 ~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~--~~~~~~p~l~~w~~~~~~~~~p~~~~~~~~ 122 (126)
T cd03183 49 NLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQPEAAGY--DVFEGRPKLAAWRKRVKEAGNPLFDEAHKI 122 (126)
T ss_pred HHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHhcCC--cccccCchHHHHHHHHHHhcchhHHHHHHH
Confidence 4678899999985 557899999999999999998877643333 336789999999999999 9999987653
No 28
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.09 E-value=2e-10 Score=99.95 Aligned_cols=70 Identities=19% Similarity=0.386 Sum_probs=60.4
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhcc
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGD 74 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~ 74 (287)
.+.+.|..||++|.+++||+|+++|+|||++++.+.+.....++ ...||+|.+|+++|.++|+|++++..
T Consensus 128 ~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~k~~~~~ 197 (201)
T PRK10542 128 QLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYAVKLN---LEGLEHIAAYMQRVAERPAVAAALKA 197 (201)
T ss_pred HHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhhccCCC---cccchHHHHHHHHHHcCHHHHHHHHH
Confidence 36678999999999999999999999999999988776543333 46899999999999999999998754
No 29
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.08 E-value=2.6e-10 Score=83.31 Aligned_cols=60 Identities=25% Similarity=0.340 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHH
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWT 61 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~t 61 (287)
.+.+.|+.||.+|.+++||+|+++|+|||++++.+.++.....+..++..||+|.+|++|
T Consensus 10 ~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 10 QLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 467889999999999999999999999999999998877654444567899999999986
No 30
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.08 E-value=2.6e-10 Score=92.79 Aligned_cols=75 Identities=17% Similarity=0.268 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHHhcC--CCccccCCCCHHHHHHHHHHHHHHHhhcC---ccccccCccHHHHHHHHHcChhHHHhhcccc
Q 023090 2 LMLSTLDALNIHLAS--NTYLVGHSVTLADIVMICNLYYGFKLIMT---KSFTSEFPHVERYFWTVANQPKIKKFLGDFK 76 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~--~tFLvGeriTlADI~la~~L~~~~~~~~d---~~~r~~yPnl~rWf~ti~~~P~fk~vl~~~~ 76 (287)
.+.+.|+.||++|.+ ++||+|+++|+|||++++.+.++...... ...+..||+|.+|+++|.++|+|+.++++..
T Consensus 36 ~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~ 115 (124)
T cd03184 36 ELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLLGYEFPLDRFPKLKKWMDAMKEDPAVQAFYTDTE 115 (124)
T ss_pred HHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhccccCCcccChHHHHHHHHhccChHHHHHhCCHH
Confidence 356789999999986 79999999999999999998775432110 1126789999999999999999999987653
No 31
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.08 E-value=3.8e-10 Score=91.90 Aligned_cols=71 Identities=14% Similarity=0.182 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHhc---CCCccccCCCCHHHHHHHHHHHHHHH---hhcCccccccCccHHHHHHHHHcChhHHHhhcc
Q 023090 3 MLSTLDALNIHLA---SNTYLVGHSVTLADIVMICNLYYGFK---LIMTKSFTSEFPHVERYFWTVANQPKIKKFLGD 74 (287)
Q Consensus 3 l~~~L~~LE~~L~---~~tFLvGeriTlADI~la~~L~~~~~---~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~ 74 (287)
+.+.++.||++|. +++|++| ++|+|||++++.+.++.. ...+-.+...||+|.+|+++|.++|+|+++..+
T Consensus 35 ~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~ 111 (120)
T cd03203 35 AAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQD 111 (120)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcCC
Confidence 4678899999997 4899999 999999999999876532 112323456899999999999999999998764
No 32
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.07 E-value=3.4e-10 Score=99.12 Aligned_cols=70 Identities=20% Similarity=0.351 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHhcCC--CccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhccc
Q 023090 3 MLSTLDALNIHLASN--TYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGDF 75 (287)
Q Consensus 3 l~~~L~~LE~~L~~~--tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~~ 75 (287)
+.+.|+.||++|.++ .||+|+++|+|||++++.+.++....++ ...||+|.+|+++|.++|+|++++...
T Consensus 134 ~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~~~~~---~~~~p~l~~~~~~~~~rp~~~~~~~~~ 205 (210)
T TIGR01262 134 ISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAERFGVD---LTPYPTLRRIAAALAALPAFQRAHPEN 205 (210)
T ss_pred HHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHHcCCC---cccchHHHHHHHHHhcCHHHHHhCccc
Confidence 567899999999874 4999999999999999999876543333 478999999999999999999988654
No 33
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.07 E-value=3.8e-10 Score=92.57 Aligned_cols=73 Identities=19% Similarity=0.260 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHHhcC-CCccccCCCCHHHHHHHHHHHHHHHh-h--cCccccccCccHHHHHHHHHcChhHHHhhcc
Q 023090 2 LMLSTLDALNIHLAS-NTYLVGHSVTLADIVMICNLYYGFKL-I--MTKSFTSEFPHVERYFWTVANQPKIKKFLGD 74 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~-~tFLvGeriTlADI~la~~L~~~~~~-~--~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~ 74 (287)
.+.+.|..||.+|.+ ++||+|+++|+|||++++.+.++... . .+-.....||+|.+|+++|.++|+|++++..
T Consensus 34 ~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rps~~~t~~~ 110 (121)
T cd03201 34 ALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRESFVKTKAE 110 (121)
T ss_pred HHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCchhhhcCCC
Confidence 356788999999985 79999999999999999987665421 1 1111237899999999999999999998764
No 34
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.04 E-value=4.4e-10 Score=98.14 Aligned_cols=72 Identities=21% Similarity=0.231 Sum_probs=60.7
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhcc
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGD 74 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~ 74 (287)
.+.+.|..||++|.++. |+|+++|+|||++++.+.++.....+..+...||+|.+|+++|.++|+|+++.++
T Consensus 129 ~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~i~~rp~~~~~~~~ 200 (202)
T PRK10357 129 KINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFQRESFARTEPP 200 (202)
T ss_pred HHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHHHHHhcccCcchhhcChHHHHHHHHHhcChhhhhcCCC
Confidence 36678999999999888 9999999999999999987644333444567899999999999999999987654
No 35
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.03 E-value=5e-10 Score=98.79 Aligned_cols=73 Identities=21% Similarity=0.216 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHHhcCC--CccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhcccc
Q 023090 2 LMLSTLDALNIHLASN--TYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGDFK 76 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~--tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~~~ 76 (287)
.+.+.|+.||++|.++ +||+|+++|+|||++++.+.++... + +..+..||+|.+|+++|.++|++++++.+++
T Consensus 127 ~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~-~-~~~l~~~P~l~~~~~r~~~~P~~k~y~~~~~ 201 (205)
T PTZ00057 127 ELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETK-Y-PNSLKNFPLLKAHNEFISNLPNIKNYISNRK 201 (205)
T ss_pred HHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHh-C-hhhhccChhHHHHHHHHHhChHHHHHHHhCC
Confidence 4678899999999864 7999999999999999988765321 2 2226799999999999999999999987664
No 36
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=98.99 E-value=1.2e-09 Score=96.74 Aligned_cols=70 Identities=14% Similarity=0.155 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCcccc-ccCccHHHHHHHHHcChhHHHhhcc
Q 023090 3 MLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFT-SEFPHVERYFWTVANQPKIKKFLGD 74 (287)
Q Consensus 3 l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r-~~yPnl~rWf~ti~~~P~fk~vl~~ 74 (287)
+...|..||++|.+++||+|+++|+|||++++.+.+.....+ .+. ..||+|.+|+++|.++|+|++++..
T Consensus 132 l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~~~~--~~~~~~~p~l~~w~~~~~~rp~~~~~~~~ 202 (211)
T PRK09481 132 LREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRLPVLGI--ELSGPGAKELKGYMTRVFERDSFLASLTE 202 (211)
T ss_pred HHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHHHhcCC--CCCCCCChhHHHHHHHHhccHHHHHHcCH
Confidence 566789999999999999999999999999998876543322 232 5799999999999999999988753
No 37
>PLN02378 glutathione S-transferase DHAR1
Probab=98.92 E-value=1.4e-09 Score=96.82 Aligned_cols=77 Identities=26% Similarity=0.354 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHhc--CCCccccCCCCHHHHHHHHHHHHHHHh---hcCccccccCccHHHHHHHHHcChhHHHhhccccc
Q 023090 3 MLSTLDALNIHLA--SNTYLVGHSVTLADIVMICNLYYGFKL---IMTKSFTSEFPHVERYFWTVANQPKIKKFLGDFKQ 77 (287)
Q Consensus 3 l~~~L~~LE~~L~--~~tFLvGeriTlADI~la~~L~~~~~~---~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~~~~ 77 (287)
+.+.|+.||++|. +++||+|+++|+|||++++.+.++... .........||+|.+|+++|.++|+|+.+++...+
T Consensus 123 ~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~~~~~~ 202 (213)
T PLN02378 123 LLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKTEEKY 202 (213)
T ss_pred HHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcCCCeecccCChHH
Confidence 5678999999998 478999999999999999998764321 11112347899999999999999999998876655
Q ss_pred cc
Q 023090 78 AE 79 (287)
Q Consensus 78 ~~ 79 (287)
+-
T Consensus 203 ~~ 204 (213)
T PLN02378 203 VI 204 (213)
T ss_pred HH
Confidence 43
No 38
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.90 E-value=5e-09 Score=84.77 Aligned_cols=65 Identities=12% Similarity=0.174 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHh---cCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhc
Q 023090 3 MLSTLDALNIHL---ASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 73 (287)
Q Consensus 3 l~~~L~~LE~~L---~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~ 73 (287)
+.+.++.+|..| .+++||+|+ +|+|||++++++.++....++ ..|+|.+|+++|.++|+|++.+.
T Consensus 46 ~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~~~~-----~~P~l~~~~~rv~~rPsv~~~~~ 113 (114)
T cd03194 46 IARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTYGLP-----LSPAAQAYVDALLAHPAMQEWIA 113 (114)
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHcCCC-----CCHHHHHHHHHHHCCHHHHHHHh
Confidence 456667777666 467899999 999999999998887543222 23999999999999999999864
No 39
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.89 E-value=4.9e-09 Score=84.59 Aligned_cols=65 Identities=14% Similarity=0.096 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHhc-CCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhc
Q 023090 3 MLSTLDALNIHLA-SNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 73 (287)
Q Consensus 3 l~~~L~~LE~~L~-~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~ 73 (287)
+.+.+..||.+|. +++||+| .+|+|||++++.+.++....++ .. |++.+|++||.++|+|++++.
T Consensus 47 ~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~~~~~~~g~~---l~--p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 47 AEKLIAVAEALLPPGAANLFG-EWCIADTDLALMLNRLVLNGDP---VP--ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred HHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHHHHHHHcCCC---CC--HHHHHHHHHHHCCHHHHHHHh
Confidence 5678899999995 5589999 5999999999999988665554 22 999999999999999999874
No 40
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=98.89 E-value=3.5e-09 Score=80.98 Aligned_cols=62 Identities=19% Similarity=0.251 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCc----cccccCccHHHHHHHHH
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTK----SFTSEFPHVERYFWTVA 63 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~----~~r~~yPnl~rWf~ti~ 63 (287)
++.+.++.||++|++++|++|+++|+|||++++.+.++....+.. .....||+|.+|+++|.
T Consensus 23 ~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 23 LAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 467889999999999999999999999999999988765432221 12467999999999873
No 41
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=98.88 E-value=4.5e-09 Score=82.88 Aligned_cols=58 Identities=31% Similarity=0.425 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcC
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQ 65 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~ 65 (287)
++.+.++.||++|.+++||+|+++|+|||++++.+.+. ..+ ...||||.+|+++|.++
T Consensus 39 ~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l~~~l~~~---~~~---~~~~p~l~~w~~r~~~~ 96 (96)
T cd03200 39 EKAAVLRALNSALGRSPWLVGSEFTVADIVSWCALLQT---GLA---SAAPANVQRWLKSCENL 96 (96)
T ss_pred HHHHHHHHHHHHHcCCCccCCCCCCHHHHHHHHHHHHc---ccc---cccChHHHHHHHHHHhC
Confidence 35678999999999999999999999999999887642 222 36899999999999864
No 42
>PRK11752 putative S-transferase; Provisional
Probab=98.88 E-value=4.7e-09 Score=96.80 Aligned_cols=74 Identities=24% Similarity=0.255 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhh-cC-ccc--cccCccHHHHHHHHHcChhHHHhhccc
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLI-MT-KSF--TSEFPHVERYFWTVANQPKIKKFLGDF 75 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~-~d-~~~--r~~yPnl~rWf~ti~~~P~fk~vl~~~ 75 (287)
++.+.|+.||++|.+++||+|+++|+|||++++.+.++.... ++ ..+ +..||+|.+|+++|.++|+|++++...
T Consensus 182 ~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~~~~~ 259 (264)
T PRK11752 182 EAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRGRIVN 259 (264)
T ss_pred HHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHHHhcc
Confidence 356789999999999999999999999999998876653210 11 111 578999999999999999999987543
No 43
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.86 E-value=3.6e-09 Score=82.33 Aligned_cols=59 Identities=22% Similarity=0.358 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHH
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVA 63 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~ 63 (287)
++.+.++.||.+|.+++|++|+++|+|||++++.+.++....++ ...+|+|.+|+++|.
T Consensus 47 ~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~~~~~~~~~~---~~~~p~l~~~~~~~~ 105 (105)
T cd03179 47 RGHAALAVLEAHLAGRDFLVGDALTIADIALAAYTHVADEGGFD---LADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHHHhccccCCC---hHhCccHHHHHHhhC
Confidence 46788999999999899999999999999999999886433333 568999999999873
No 44
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=98.84 E-value=6.4e-09 Score=79.07 Aligned_cols=61 Identities=26% Similarity=0.301 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHH
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTV 62 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti 62 (287)
.+.+.++.||++|.++.|++|+++|+|||++++.+.++........++..+|++.+|+++|
T Consensus 40 ~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 40 ELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhhhhhhccCccHHHHHHhC
Confidence 4678999999999999999999999999999999988765433222467899999999875
No 45
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=98.82 E-value=6.8e-09 Score=81.20 Aligned_cols=59 Identities=29% Similarity=0.424 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHhcCCC--ccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHc
Q 023090 2 LMLSTLDALNIHLASNT--YLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVAN 64 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~t--FLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~ 64 (287)
.+.+.|+.||++|..++ ||+|+++|+||+++++.|...... .+.+.||||.+|++||.+
T Consensus 39 ~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~~----~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 39 ELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRWA----DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHCC----HHTTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhhc----ccccccHHHHHHHHhhcC
Confidence 46789999999999988 999999999999999988554311 112699999999999974
No 46
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=98.78 E-value=1.6e-08 Score=92.42 Aligned_cols=73 Identities=23% Similarity=0.245 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHhc------------------CCCccccCCCCHHHHHHHHHHHHHHHh---hcCccccccCccHHHHHHH
Q 023090 3 MLSTLDALNIHLA------------------SNTYLVGHSVTLADIVMICNLYYGFKL---IMTKSFTSEFPHVERYFWT 61 (287)
Q Consensus 3 l~~~L~~LE~~L~------------------~~tFLvGeriTlADI~la~~L~~~~~~---~~d~~~r~~yPnl~rWf~t 61 (287)
+.+.|+.||++|. +++||+|+++|+|||++++.+.++... ..+-++.+.||+|.+|+++
T Consensus 128 l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i~~~~p~l~~w~~~ 207 (236)
T TIGR00862 128 LLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDIPAEFTGVWRYLSN 207 (236)
T ss_pred HHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCccccCchHHHHHHH
Confidence 6788999999997 578999999999999999999887532 2233346899999999999
Q ss_pred HHcChhHHHhhccc
Q 023090 62 VANQPKIKKFLGDF 75 (287)
Q Consensus 62 i~~~P~fk~vl~~~ 75 (287)
+.++|+|+.+++.-
T Consensus 208 ~~~~~sf~~t~p~~ 221 (236)
T TIGR00862 208 AYAREEFTNTCPDD 221 (236)
T ss_pred HhccchHHhhCCCh
Confidence 99999999987543
No 47
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.76 E-value=2.4e-08 Score=81.93 Aligned_cols=62 Identities=16% Similarity=0.208 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHc
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVAN 64 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~ 64 (287)
.+.+.|+.||++|.+++||+|+++|+||++++..+.+.... .+......||+|.+|+++|.+
T Consensus 62 ~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~-~~~~~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 62 NFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIV-SPFPLLEEDDPVYDWFERCLD 123 (124)
T ss_pred HHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHc-CcccccccCChHHHHHHHHhc
Confidence 46788999999999999999999999999999998886542 122335789999999999975
No 48
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.75 E-value=2e-08 Score=88.50 Aligned_cols=65 Identities=25% Similarity=0.367 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHH
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIK 69 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk 69 (287)
.+.+.+..+|.+|.+++||+|+++|+|||++++.+.++.....+ ...||+|.+|+++|.++|+++
T Consensus 135 ~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~~~~~---~~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 135 EIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRLALLGEE---LADYPALKAWYERVLARPAFR 199 (211)
T ss_pred HHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHhhhcCcc---cccChHHHHHHHHHHcCCchh
Confidence 46788999999999999999999999999999999885433222 378999999999999999965
No 49
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=98.73 E-value=2.9e-08 Score=92.10 Aligned_cols=73 Identities=16% Similarity=0.194 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHhcC-CCccccCCCCHHHHHHHHHHHHHHHh---hcCccccccCccHHHHHHHHHcChhHHHhhccc
Q 023090 3 MLSTLDALNIHLAS-NTYLVGHSVTLADIVMICNLYYGFKL---IMTKSFTSEFPHVERYFWTVANQPKIKKFLGDF 75 (287)
Q Consensus 3 l~~~L~~LE~~L~~-~tFLvGeriTlADI~la~~L~~~~~~---~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~~ 75 (287)
+.+.|..||++|.+ +.||+|+++|+|||++++.+.++... ..+-.....||+|.+|+++|.++|+|+.+++..
T Consensus 176 l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~rps~~~~~~~~ 252 (265)
T PLN02817 176 LLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSMESFVKTRALP 252 (265)
T ss_pred HHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhcchhHhhcCCCH
Confidence 56778999999984 69999999999999999998765321 111123578999999999999999999987643
No 50
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.69 E-value=2.8e-08 Score=77.59 Aligned_cols=58 Identities=24% Similarity=0.301 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHH
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTV 62 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti 62 (287)
++.+.|..||++|.+++| +++|+|||++++.+.++.....+..++..||+|.+|+++|
T Consensus 41 ~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 41 KIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRHPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred HHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHccCcchhhhChHHHHHHHhC
Confidence 467889999999999998 9999999999999988754334444568999999999875
No 51
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=98.67 E-value=2.8e-08 Score=77.66 Aligned_cols=59 Identities=27% Similarity=0.356 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHHhcC--CCccccCCCCHHHHHHHHHHHHHHHhhcCccc-cccCccHHHHHHHH
Q 023090 2 LMLSTLDALNIHLAS--NTYLVGHSVTLADIVMICNLYYGFKLIMTKSF-TSEFPHVERYFWTV 62 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~--~tFLvGeriTlADI~la~~L~~~~~~~~d~~~-r~~yPnl~rWf~ti 62 (287)
.+.+.++.||++|.+ ++|++|+++|+|||++++.+.++... ++.. +..||++.+|+++|
T Consensus 43 ~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~--~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 43 AIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYL--DPKLLLKKYPKLKALRERV 104 (104)
T ss_pred hhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhh--CchhhHHhChhHHHHHHhC
Confidence 467889999999987 89999999999999999999886433 3333 67899999999875
No 52
>PLN02907 glutamate-tRNA ligase
Probab=98.66 E-value=3.9e-08 Score=102.60 Aligned_cols=65 Identities=23% Similarity=0.289 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChh
Q 023090 3 MLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPK 67 (287)
Q Consensus 3 l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~ 67 (287)
+.+.|+.||++|..++||+|+++|+|||++++.+...............||||.||+++|.++|+
T Consensus 95 l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 95 FENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhhhhhcccccccCHHHHHHHHHHHhCCC
Confidence 46788999999999999999999999999999886542111222236789999999999999999
No 53
>PRK15113 glutathione S-transferase; Provisional
Probab=98.63 E-value=6.9e-08 Score=85.59 Aligned_cols=68 Identities=13% Similarity=-0.003 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHhcC-CCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhccc
Q 023090 2 LMLSTLDALNIHLAS-NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGDF 75 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~-~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~~ 75 (287)
.+.+.|+.||++|.+ ..||+|+ +|+|||++++.+.++.....+ . .|+|.+|+++|.++|+|++++...
T Consensus 141 ~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~~~~~---~--~p~l~~~~~r~~~rp~~~~~~~~~ 209 (214)
T PRK15113 141 AAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVLHGDE---V--PERLADYATFQWQRASVQRWLALS 209 (214)
T ss_pred HHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHHcCCC---C--CHHHHHHHHHHhcCHHHHHHHHHh
Confidence 356789999999985 4699996 999999999998876433222 1 299999999999999999988654
No 54
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.63 E-value=6.8e-08 Score=87.38 Aligned_cols=72 Identities=24% Similarity=0.358 Sum_probs=61.4
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhc
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 73 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~ 73 (287)
.+.++++.+|++|.++.||+|+++|+|||.+++.+..+.....+......||++.||++++..+|++.+..+
T Consensus 137 ~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~~P~~~e~~~ 208 (226)
T KOG0867|consen 137 KLRKALDNLERFLKTQVYLAGDQLTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYERIQKRPAYEEANE 208 (226)
T ss_pred HHHHHHHHHHHHHccCCcccCCcccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHHHHhCccHHHHHH
Confidence 477899999999999999999999999999999998874222234558899999999999999999887654
No 55
>PRK10387 glutaredoxin 2; Provisional
Probab=98.62 E-value=3.6e-08 Score=86.29 Aligned_cols=63 Identities=16% Similarity=0.099 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHH
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIK 69 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk 69 (287)
.+.+.|+.||++|.+ +||+|+++|+|||++++.+.++... .+ ...+|+|.+|++||.++|++.
T Consensus 146 ~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~-~~---~~~~p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 146 EINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLV-KG---IEWPPRVADYRDNMSKKTQVP 208 (210)
T ss_pred HHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceee-cC---CCCCHHHHHHHHHHHHHhCCC
Confidence 456788999999987 9999999999999999999876432 12 234699999999999998763
No 56
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=98.55 E-value=1.2e-07 Score=87.39 Aligned_cols=73 Identities=27% Similarity=0.387 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHhcC----CCccccCCCCHHHHHHHHHHHHHHHhhcCccccc--cCccHHHHHHHHHcChhHHHhhccc
Q 023090 3 MLSTLDALNIHLAS----NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTS--EFPHVERYFWTVANQPKIKKFLGDF 75 (287)
Q Consensus 3 l~~~L~~LE~~L~~----~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~--~yPnl~rWf~ti~~~P~fk~vl~~~ 75 (287)
+..+|..+|+.|.. .+||+|+.+|+|||.++.+|.++....+...+.. ..|||..||.++..|++|++++|+.
T Consensus 210 l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~yw~~gsrpnle~Yf~rvrrR~sf~kvlg~~ 288 (325)
T KOG4420|consen 210 LAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKKYWEDGSRPNLESYFERVRRRFSFRKVLGDI 288 (325)
T ss_pred HHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccHHHhcccCCCccHHHHHHHHHhhhHHHHhhhhH
Confidence 55677888888887 6899999999999999999999988777766654 7899999999999999999999976
No 57
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.37 E-value=1.1e-06 Score=79.01 Aligned_cols=74 Identities=27% Similarity=0.341 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHhc--CCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhccccc
Q 023090 3 MLSTLDALNIHLA--SNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGDFKQ 77 (287)
Q Consensus 3 l~~~L~~LE~~L~--~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~~~~ 77 (287)
..+.+..+++.|. ++.||||+++|.||++++..+..+... ++++....||+|.++..+|.++|.+++++..++.
T Consensus 128 ~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~-~~~~~~~~~P~L~a~~~kv~~~p~ik~~i~~r~~ 203 (206)
T KOG1695|consen 128 KPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEEL-LDPSALDHFPKLKAFKERVSSIPNIKKYLESRPV 203 (206)
T ss_pred hHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHh-cCchhhccChHHHHHHHHHhcCchHHHHHhcCCC
Confidence 4567889999998 457999999999999999999887653 6777788999999999999999999999987754
No 58
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.35 E-value=8.3e-07 Score=74.53 Aligned_cols=62 Identities=16% Similarity=0.233 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCc----cccccCccHHHHHHHHHc
Q 023090 3 MLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTK----SFTSEFPHVERYFWTVAN 64 (287)
Q Consensus 3 l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~----~~r~~yPnl~rWf~ti~~ 64 (287)
+.+.++.|++.|++++||+|+++|+||+++++.+..+....++. .....||||.+|++||.+
T Consensus 69 a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 69 AKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred HHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 46788999999999999999999999999999887765433321 125689999999999985
No 59
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.29 E-value=1e-06 Score=72.74 Aligned_cols=59 Identities=14% Similarity=0.250 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHh-----hcCccccccCccHHHHHHHH
Q 023090 3 MLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKL-----IMTKSFTSEFPHVERYFWTV 62 (287)
Q Consensus 3 l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~-----~~d~~~r~~yPnl~rWf~ti 62 (287)
+.+.|+.|+..|++++||.|+++|.||+++++.+..+... .+. .....||||.+|++||
T Consensus 62 ~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~-~~~~~~pnL~~y~~Ri 125 (126)
T cd03211 62 VDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELA-EKVKKYSNLLAFCRRI 125 (126)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHH-HHHHhCcHHHHHHHhc
Confidence 5678999999999999999999999999999998776533 121 2356899999999987
No 60
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=98.27 E-value=7e-07 Score=79.25 Aligned_cols=60 Identities=17% Similarity=0.258 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCc-cHHHHHHHHHcChhH
Q 023090 3 MLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFP-HVERYFWTVANQPKI 68 (287)
Q Consensus 3 l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yP-nl~rWf~ti~~~P~f 68 (287)
+.+.|+.||++|.+++||+| ++|+|||++++.+.++.... + ..+| ||.+|++||.+++++
T Consensus 146 ~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~-~----~~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 146 INADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVA-G----INWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred HHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeeec-C----CCCChHHHHHHHHHHHHhCC
Confidence 56789999999999999965 69999999999987754211 1 1367 999999999998865
No 61
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.21 E-value=3e-06 Score=72.60 Aligned_cols=51 Identities=12% Similarity=0.048 Sum_probs=40.6
Q ss_pred HHHhcCCCccccCCCCHHHHHHHHHHHHHHHh-hc-CccccccCccHHHHHHHHHc
Q 023090 11 NIHLASNTYLVGHSVTLADIVMICNLYYGFKL-IM-TKSFTSEFPHVERYFWTVAN 64 (287)
Q Consensus 11 E~~L~~~tFLvGeriTlADI~la~~L~~~~~~-~~-d~~~r~~yPnl~rWf~ti~~ 64 (287)
+....++.|++|+++|||||++++.+..+... .+ + +..||+|.+|+++|.+
T Consensus 93 ~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~~~~~D---l~~~p~I~~W~eRm~~ 145 (149)
T cd03197 93 AALGKDRQFHGGSKPNLADLAVYGVLRSVEGHPAFKD---MVEETKIGEWYERMDA 145 (149)
T ss_pred HHhcCCCCccCCCCCCHHHHHHHHHHHHHHHhccccc---hhhCcCHHHHHHHHHH
Confidence 33334578999999999999999999766543 33 4 6689999999999985
No 62
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.07 E-value=1.1e-05 Score=73.73 Aligned_cols=74 Identities=15% Similarity=0.227 Sum_probs=60.8
Q ss_pred hHHHHHHHHHHHhc-CCCccccCCCCHHHHHHHHHHHHHHHhh---c--CccccccCccHHHHHHHHHcChhHHHhhccc
Q 023090 2 LMLSTLDALNIHLA-SNTYLVGHSVTLADIVMICNLYYGFKLI---M--TKSFTSEFPHVERYFWTVANQPKIKKFLGDF 75 (287)
Q Consensus 2 ~l~~~L~~LE~~L~-~~tFLvGeriTlADI~la~~L~~~~~~~---~--d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~~ 75 (287)
.+...|..||+.|. +.+|+.|+.+++.||++.+.+.++.... . +-.....+|.|.+|.++|.++|+|+.++.+.
T Consensus 133 e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~ 212 (231)
T KOG0406|consen 133 ELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPDS 212 (231)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCCH
Confidence 36778999999999 7899999999999999997777655421 1 1112568999999999999999999998765
No 63
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.96 E-value=1.1e-05 Score=71.13 Aligned_cols=70 Identities=24% Similarity=0.358 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHhcC--CCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhccc
Q 023090 3 MLSTLDALNIHLAS--NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGDF 75 (287)
Q Consensus 3 l~~~L~~LE~~L~~--~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~~ 75 (287)
|.+.+..||+.|.. ..|-|||.+|+|||++.+.+..+....+| +..||-|+|-.+++.+.|+|+...++.
T Consensus 137 ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA~rf~vd---l~PYPti~ri~e~l~elpaFq~ahP~n 208 (217)
T KOG0868|consen 137 ITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNANRFHVD---LTPYPTITRINEELAELPAFQAAHPDN 208 (217)
T ss_pred HHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhhhhcccc---CCcCchHHHHHHHHHhCHHHHhcCCCC
Confidence 56789999999986 57999999999999999999888666677 889999999999999999999876543
No 64
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.65 E-value=2.2e-05 Score=73.18 Aligned_cols=70 Identities=21% Similarity=0.294 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHH---hhcCcc--ccccCccHHHHHHHHHcChhHHHhh
Q 023090 3 MLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFK---LIMTKS--FTSEFPHVERYFWTVANQPKIKKFL 72 (287)
Q Consensus 3 l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~---~~~d~~--~r~~yPnl~rWf~ti~~~P~fk~vl 72 (287)
+-..|+.||++|+++.||+|+++|-|||-++++|.+.-. ..+-.. -...||||..|+..+-+.|.|..+.
T Consensus 210 lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~pg~~~T~ 284 (324)
T COG0435 210 LFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLPGFAETV 284 (324)
T ss_pred HHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhcCccccccc
Confidence 556889999999999999999999999999999987422 111111 1345999999999999999999865
No 65
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.44 E-value=4.4e-05 Score=70.72 Aligned_cols=70 Identities=20% Similarity=0.307 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHhcCCC--ccccCCCCHHHHHHHHHHHHHHH---hhcC---ccccccCccHHHHHHHHHc-ChhHHHhh
Q 023090 3 MLSTLDALNIHLASNT--YLVGHSVTLADIVMICNLYYGFK---LIMT---KSFTSEFPHVERYFWTVAN-QPKIKKFL 72 (287)
Q Consensus 3 l~~~L~~LE~~L~~~t--FLvGeriTlADI~la~~L~~~~~---~~~d---~~~r~~yPnl~rWf~ti~~-~P~fk~vl 72 (287)
+-..|+.+|++|+++. |++|+++|.|||-+++++.+.-. +.+- ..+|..||+|..|...|-. .|+|+.+.
T Consensus 208 lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~lk~iY~~~~~~~~Tt 286 (319)
T KOG2903|consen 208 LFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWLKNIYWNIPGFSSTT 286 (319)
T ss_pred HHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHHHHHHHHHhhccchhhcc
Confidence 4567888899999977 99999999999999999877422 1121 2458899999999999998 89998765
No 66
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=97.29 E-value=0.00027 Score=63.60 Aligned_cols=72 Identities=21% Similarity=0.199 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHhcC---CCccccCCCCHHHHHHHHHHHHHHH---hhcCccccccCccHHHHHHHHHcChhHHHhhcc
Q 023090 3 MLSTLDALNIHLAS---NTYLVGHSVTLADIVMICNLYYGFK---LIMTKSFTSEFPHVERYFWTVANQPKIKKFLGD 74 (287)
Q Consensus 3 l~~~L~~LE~~L~~---~tFLvGeriTlADI~la~~L~~~~~---~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~~ 74 (287)
+.+.|..||+||.+ +.||.||++|+||+.+++=|+.+.. ...+-++-..+++|.||+..+.++.+|..+-+.
T Consensus 128 Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~d~F~~tcp~ 205 (221)
T KOG1422|consen 128 LLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAYARDEFTNTCPA 205 (221)
T ss_pred HHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhHHHhhcCCch
Confidence 45667899999996 7899999999999999998876532 223444567899999999999999999876543
No 67
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=96.31 E-value=0.0021 Score=64.99 Aligned_cols=72 Identities=25% Similarity=0.341 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccc--cccCccHHHHHHHHHcChhHHHhhccc
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSF--TSEFPHVERYFWTVANQPKIKKFLGDF 75 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~--r~~yPnl~rWf~ti~~~P~fk~vl~~~ 75 (287)
.+...+..|+.+|.-+|||||.++|+||++++..+..--+. .... ...+-+|.||+.-...+++...++...
T Consensus 92 ~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~--~~~lk~~k~~~~v~Rw~~~~~~~~a~~~v~~t~ 165 (712)
T KOG1147|consen 92 EISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALHSNGMR--QEQLKAKKDYQNVERWYDLPEFQEAHNKVLATL 165 (712)
T ss_pred HHHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHhcccch--HHHHHhhCCchhhhhhcCcHhHHHHHHHHHHHH
Confidence 35677889999999999999999999999999988652110 0111 246789999999666667776666444
No 68
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=96.18 E-value=0.021 Score=47.03 Aligned_cols=65 Identities=15% Similarity=0.111 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhcC-CCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHHhhc
Q 023090 3 MLSTLDALNIHLAS-NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 73 (287)
Q Consensus 3 l~~~L~~LE~~L~~-~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~vl~ 73 (287)
+.+++...+..|.. .++|.|+ .||||..++.++.++..+... --+.+..|.+++-++|+|++.+.
T Consensus 48 a~kL~~~a~~ll~~g~~~LFGe-wsIAD~dlA~ml~Rl~~~gd~-----vP~~l~~Ya~~qwqrpsVQ~Wla 113 (117)
T PF14834_consen 48 AQKLIAVAERLLADGGPNLFGE-WSIADADLALMLNRLVTYGDP-----VPERLADYAERQWQRPSVQRWLA 113 (117)
T ss_dssp HHHHHHHHHHHTTT--SSTTSS---HHHHHHHHHHHHHHTTT---------HHHHHHHHHHHT-HHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCcccc-chHHHHHHHHHHHHHHHcCCC-----CCHHHHHHHHHHHCCHHHHHHHH
Confidence 56777888887876 6899996 899999999999998755322 22689999999999999998764
No 69
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=95.86 E-value=0.0056 Score=57.05 Aligned_cols=62 Identities=21% Similarity=0.357 Sum_probs=50.1
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCcc----ccccCccHHHHHHHHHc
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKS----FTSEFPHVERYFWTVAN 64 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~----~r~~yPnl~rWf~ti~~ 64 (287)
.+++-|+.++..|++..||.|+++|-+|.+++..|..++- .+... +-..+|||..|.+||.+
T Consensus 207 ll~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y-P~~~~i~d~le~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 207 LLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYY-PFRSHISDLLEGDFPNLLEYCERIRK 272 (281)
T ss_pred HHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheec-cCCCcHHHHHhhhchHHHHHHHHHHH
Confidence 4577889999999999999999999999999988876442 22222 23689999999999985
No 70
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=93.95 E-value=0.098 Score=47.48 Aligned_cols=64 Identities=17% Similarity=0.286 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCc----cccccCccHHHHHHHHHcC
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTK----SFTSEFPHVERYFWTVANQ 65 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~----~~r~~yPnl~rWf~ti~~~ 65 (287)
++.++.+.|..+|+..+|+.|++.|-+|..++..+..+....+.. ...+.|+||..+..||.++
T Consensus 181 ~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~lkkys~LlefcrrIeq~ 248 (257)
T KOG3027|consen 181 QVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANILKKYSNLLEFCRRIEQQ 248 (257)
T ss_pred HHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHHHHHhHHHHHHHHHHHHH
Confidence 467788999999999999999999999999999887765443221 3467899999999988754
No 71
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=93.32 E-value=0.19 Score=42.27 Aligned_cols=61 Identities=20% Similarity=0.230 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChh
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPK 67 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~ 67 (287)
+++..|..||..|.......| .+|+-||.+++.|..+ ..+-+ ..=-|+|.+|++++++.-.
T Consensus 63 ~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~L-tivkg---i~~P~~V~~Y~~~~s~~t~ 123 (132)
T PF04399_consen 63 ELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSL-TIVKG---IQWPPKVRAYMDRMSKATG 123 (132)
T ss_dssp HHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHH-CTCTT---S---HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhh-hhccC---CcCCHHHHHHHHHHHHHcC
Confidence 456777788877776655555 9999999999988554 33333 2122799999999986543
No 72
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=93.29 E-value=0.065 Score=49.05 Aligned_cols=60 Identities=20% Similarity=0.346 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHHH
Q 023090 4 LSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKK 70 (287)
Q Consensus 4 ~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk~ 70 (287)
.+.+..|+.+|.+.+|..|..++-+|+.++..+.- ......++|..||+.+|.++-....
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~~-------ep~s~~~v~~~~w~~~l~a~~~~~~ 69 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALGV-------EPQSARLVNAERWYSKLEALLRLLA 69 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhccc-------CcchhhhhHHHHHHHHHHHHHHHHh
Confidence 35788999999999999999999999998876632 2225678999999999998766654
No 73
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=90.50 E-value=0.66 Score=44.30 Aligned_cols=63 Identities=14% Similarity=0.220 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccc----cccCccHHHHHHHHHcC
Q 023090 3 MLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSF----TSEFPHVERYFWTVANQ 65 (287)
Q Consensus 3 l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~----r~~yPnl~rWf~ti~~~ 65 (287)
..+++..|.+.|++..|+.|++.|--|..++..+..++...+...- ...++||.|+..+|...
T Consensus 168 Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s~ 234 (313)
T KOG3028|consen 168 ASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVHLLAHKNLVRYVERIRSL 234 (313)
T ss_pred HHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHHHHhcchHHHHHHHHHHH
Confidence 3578899999999999999999999999999999886654332111 23489999999998753
No 74
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=90.49 E-value=0.75 Score=38.60 Aligned_cols=60 Identities=20% Similarity=0.195 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChh
Q 023090 3 MLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPK 67 (287)
Q Consensus 3 l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~ 67 (287)
++..|..|+..|..... ++..+|+-||.+++.|..+. .+-+ ..=-|+|.+|+++|++.-.
T Consensus 65 l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~Lt-~vkg---i~~P~~V~~Y~~~~s~~t~ 124 (128)
T cd03199 65 LNALLEELDPLILSSEA-VNGQLSTDDIILFPILRNLT-LVKG---LVFPPKVKAYLERMSALTK 124 (128)
T ss_pred HHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhhhh-hhcC---CCCCHHHHHHHHHHHHHhC
Confidence 55666677766654444 46689999999999986544 3333 2122799999999987543
No 75
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=86.91 E-value=1.3 Score=42.17 Aligned_cols=49 Identities=14% Similarity=0.180 Sum_probs=36.2
Q ss_pred cCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHc
Q 023090 15 ASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVAN 64 (287)
Q Consensus 15 ~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~ 64 (287)
.+++||.|...+|||++++..|........-.+ .-...+|..|+-+|.+
T Consensus 306 knr~flGG~kPnLaDLsvfGvl~sm~gc~afkd-~~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 306 KNRPFLGGKKPNLADLSVFGVLRSMEGCQAFKD-CLQNTSIGEWYYRMEA 354 (370)
T ss_pred CCCCccCCCCCchhhhhhhhhhhHhhhhhHHHH-HHhcchHHHHHHHHHH
Confidence 458999999999999999999876443211111 3356889999999874
No 76
>PF09868 DUF2095: Uncharacterized protein conserved in archaea (DUF2095); InterPro: IPR018662 This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=56.23 E-value=5.8 Score=32.93 Aligned_cols=27 Identities=22% Similarity=0.495 Sum_probs=24.0
Q ss_pred CCCCCCCCCCCCCcchhhhhhhhccCC
Q 023090 126 KPKNPLDLLPPSKMILDDWKRLYSNTK 152 (287)
Q Consensus 126 K~k~pl~~lp~s~f~ld~~Kr~YsN~~ 152 (287)
|+|.|.|.+|=-..++++||+.|-+--
T Consensus 2 ~kk~p~d~~~wqeyd~eEFkkkfP~La 28 (128)
T PF09868_consen 2 KKKKPIDEFPWQEYDIEEFKKKFPALA 28 (128)
T ss_pred CCcCcccccchhHhhHHHHHHHhHHHH
Confidence 568899999999999999999998743
No 77
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=47.88 E-value=1.5 Score=39.59 Aligned_cols=73 Identities=19% Similarity=0.094 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHH-HHcChhHHHhhccccccc
Q 023090 3 MLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWT-VANQPKIKKFLGDFKQAE 79 (287)
Q Consensus 3 l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~t-i~~~P~fk~vl~~~~~~~ 79 (287)
|.+.|...+.+|...++ .+.+++|+.+.+.+...........++..++++.+|+.+ ....+ .+-+++++.++.
T Consensus 96 v~~~l~~~~~~l~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g-~~~tlADl~~~~ 169 (226)
T KOG0867|consen 96 VDQWLEFENGVLDPVTF---ERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVYLAG-DQLTLADLSLAS 169 (226)
T ss_pred HHHHHHhhhcccccccc---cceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCcccC-CcccHHHHHHhh
Confidence 34445445555555544 789999977777655555445556778899999999999 55566 888888888887
No 78
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=38.85 E-value=44 Score=30.01 Aligned_cols=63 Identities=16% Similarity=0.195 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHHHhhcCccccccCccHHHHHHHHHcChhHH
Q 023090 2 LMLSTLDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIK 69 (287)
Q Consensus 2 ~l~~~L~~LE~~L~~~tFLvGeriTlADI~la~~L~~~~~~~~d~~~r~~yPnl~rWf~ti~~~P~fk 69 (287)
++...|+.|+..+...+ -+...+++-||.+++.|..++ .+-+-.|- ..|..|..+++++-.+.
T Consensus 146 ~i~~dl~~l~~Li~~~s-~~n~~l~~ddi~vFplLRnlt-~v~gi~wp---s~v~dy~~~msektqV~ 208 (215)
T COG2999 146 RIQADLRALDKLIVGPS-AVNGELSEDDILVFPLLRNLT-LVAGIQWP---SRVADYRDNMSEKTQVN 208 (215)
T ss_pred HHHHHHHHHHHHhcCcc-hhccccchhhhhhhHHhccce-ecccCCCc---HHHHHHHHHHHHhhCcc
Confidence 45666777777777665 344569999999999886544 23332222 37899999999765543
No 79
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=30.95 E-value=37 Score=32.69 Aligned_cols=70 Identities=17% Similarity=0.261 Sum_probs=43.6
Q ss_pred CceEEEEee-ecCCCcce---eEe-------cccchhhHHHhhh-hhhh-hcceeEEEEeeCCCc-ceEEEEEEeCCCCC
Q 023090 171 GYSLWFCDY-KYNDENTV---SFV-------TLNKVSGFLQRMD-LARK-YAFGKMLIIGNEPPY-KVKGLWLFRGPEIP 236 (287)
Q Consensus 171 ~~Slw~~~Y-ky~~el~~---~fm-------s~Nli~Gf~qRl~-~~rK-~~Fg~~~v~G~~~~~-~I~G~w~~rG~~~~ 236 (287)
|+--=..|| .||++... .|- -.+-|++|+++.. .+++ ..+-|+.|||-.--+ .-.| =||++
T Consensus 137 GFdEIqfDYIRFP~~~~~~~l~y~~~~~~~~r~~aI~~Fl~~a~~~l~~~~v~vSaDVfG~~~~~~~~~~----iGQ~~- 211 (316)
T PF13200_consen 137 GFDEIQFDYIRFPDEGRLSGLDYSENDTEESRVDAITDFLAYAREELHPYGVPVSADVFGYVAWSPDDMG----IGQDF- 211 (316)
T ss_pred CCCEEEeeeeecCCCCcccccccCCCCCcchHHHHHHHHHHHHHHHHhHcCCCEEEEecccccccCCCCC----cCCCH-
Confidence 565566788 88884322 220 3467999999988 4554 579999999965322 2222 38988
Q ss_pred cccccccccc
Q 023090 237 KFVMDECYDM 246 (287)
Q Consensus 237 ~~~~~~~~d~ 246 (287)
. .+..++|+
T Consensus 212 ~-~~a~~vD~ 220 (316)
T PF13200_consen 212 E-KIAEYVDY 220 (316)
T ss_pred H-HHhhhCCE
Confidence 3 45444443
No 80
>PF11280 DUF3081: Protein of unknown function (DUF3081); InterPro: IPR021432 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=22.97 E-value=1.1e+02 Score=23.52 Aligned_cols=35 Identities=20% Similarity=0.431 Sum_probs=25.1
Q ss_pred cCCCCceEEEEeeecCCCcceeEeccc----------chhhHHHhhhhh
Q 023090 167 YDPEGYSLWFCDYKYNDENTVSFVTLN----------KVSGFLQRMDLA 205 (287)
Q Consensus 167 ~d~e~~Slw~~~Yky~~el~~~fms~N----------li~Gf~qRl~~~ 205 (287)
.|.+||.+|.. ....|+++|.=| ...-|++||..+
T Consensus 34 ~D~DGYtv~L~----~~~VtLtl~FHnty~~dy~~~~~~~~F~kkl~~i 78 (79)
T PF11280_consen 34 SDFDGYTVYLE----DNGVTLTLGFHNTYHLDYDQEHNYDSFLKKLKAI 78 (79)
T ss_pred ecCCCcEEEEe----CCCEEEEEEeccceecCCCCHHHHHHHHHHHHcc
Confidence 48899999983 256788888766 366777777653
No 81
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=21.76 E-value=1e+02 Score=21.72 Aligned_cols=32 Identities=13% Similarity=0.113 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhcCCCccccCCC-CHHHHHHHHH
Q 023090 4 LSTLDALNIHLASNTYLVGHSV-TLADIVMICN 35 (287)
Q Consensus 4 ~~~L~~LE~~L~~~tFLvGeri-TlADI~la~~ 35 (287)
.++...|.+.+.+..|-.|+++ |.++|+--.-
T Consensus 3 ~~i~~~l~~~I~~g~~~~g~~lps~~~la~~~~ 35 (64)
T PF00392_consen 3 EQIYDQLRQAILSGRLPPGDRLPSERELAERYG 35 (64)
T ss_dssp HHHHHHHHHHHHTTSS-TTSBE--HHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCCCCEeCCHHHHHHHhc
Confidence 4677888899999999999999 9998875433
Done!