Query 023095
Match_columns 287
No_of_seqs 120 out of 1249
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 08:24:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023095.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023095hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 2.9E-55 6.3E-60 398.0 32.9 287 1-287 79-365 (365)
2 PTZ00224 protein phosphatase 2 100.0 7.3E-41 1.6E-45 304.9 30.5 235 1-255 36-274 (381)
3 KOG0697 Protein phosphatase 1B 100.0 1.1E-40 2.4E-45 280.4 21.7 256 1-263 36-302 (379)
4 PF00481 PP2C: Protein phospha 100.0 6E-41 1.3E-45 293.2 13.8 236 1-244 14-254 (254)
5 COG0631 PTC1 Serine/threonine 100.0 1.9E-39 4.1E-44 284.0 22.7 226 1-255 23-255 (262)
6 KOG0698 Serine/threonine prote 100.0 1.5E-38 3.4E-43 287.0 27.6 248 1-260 54-312 (330)
7 PRK14559 putative protein seri 100.0 4.8E-36 1.1E-40 287.5 24.8 217 24-257 413-640 (645)
8 cd00143 PP2Cc Serine/threonine 100.0 3.5E-35 7.5E-40 255.5 27.8 233 1-251 15-254 (254)
9 smart00332 PP2Cc Serine/threon 100.0 1E-34 2.3E-39 253.1 26.8 230 1-249 20-255 (255)
10 KOG0699 Serine/threonine prote 100.0 9.3E-34 2E-38 246.4 20.2 168 87-254 329-505 (542)
11 KOG0700 Protein phosphatase 2C 100.0 2.8E-33 6.1E-38 248.5 20.5 218 22-239 96-378 (390)
12 KOG1379 Serine/threonine prote 99.9 6.3E-23 1.4E-27 177.1 20.6 203 2-251 92-330 (330)
13 KOG1323 Serine/threonine phosp 99.9 4.2E-22 9.1E-27 172.3 21.0 233 22-257 141-492 (493)
14 PF13672 PP2C_2: Protein phosp 99.8 2.1E-19 4.4E-24 152.8 14.9 171 2-218 13-195 (212)
15 smart00331 PP2C_SIG Sigma fact 99.8 9.1E-18 2E-22 140.6 19.3 163 22-236 27-192 (193)
16 KOG0618 Serine/threonine phosp 99.8 2.5E-18 5.5E-23 166.2 14.9 219 20-254 546-774 (1081)
17 TIGR02865 spore_II_E stage II 99.7 1E-15 2.2E-20 151.8 20.2 175 22-251 577-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.6 8.2E-14 1.8E-18 116.4 19.5 176 22-252 1-193 (193)
19 COG2208 RsbU Serine phosphatas 98.8 1.6E-06 3.5E-11 79.9 20.8 176 23-252 173-366 (367)
20 cd01460 vWA_midasin VWA_Midasi 54.0 57 0.0012 28.7 7.0 42 242-286 193-235 (266)
21 PRK10693 response regulator of 52.4 1.7E+02 0.0037 26.0 10.4 94 22-120 160-259 (303)
22 PF09436 DUF2016: Domain of un 51.2 9.6 0.00021 26.4 1.4 18 189-207 26-43 (72)
23 COG2168 DsrH Uncharacterized c 51.2 11 0.00025 27.5 1.8 54 185-246 20-73 (96)
24 COG3700 AphA Acid phosphatase 42.0 38 0.00083 28.0 3.7 48 191-239 72-130 (237)
25 COG1539 FolB Dihydroneopterin 40.1 1.7E+02 0.0036 22.4 6.9 64 196-261 43-108 (121)
26 cd00534 DHNA_DHNTPE Dihydroneo 39.0 1.6E+02 0.0036 21.9 6.9 60 196-257 42-103 (118)
27 PF06057 VirJ: Bacterial virul 37.2 1.4E+02 0.003 24.9 6.4 62 191-252 2-78 (192)
28 PF01436 NHL: NHL repeat; Int 32.8 86 0.0019 16.9 3.6 20 96-115 9-28 (28)
29 TIGR00525 folB dihydroneopteri 31.8 2E+02 0.0043 21.5 6.2 60 196-257 41-102 (116)
30 PRK15322 invasion protein OrgB 28.5 2.6E+02 0.0056 23.6 6.6 52 185-237 142-194 (210)
31 PF06574 FAD_syn: FAD syntheta 26.9 42 0.0009 26.9 1.7 51 226-280 23-73 (157)
32 PRK11593 folB bifunctional dih 26.8 2.8E+02 0.006 20.8 7.0 60 196-258 42-103 (119)
33 COG3484 Predicted proteasome-t 25.5 98 0.0021 26.0 3.6 30 188-219 39-68 (255)
34 PRK11245 folX D-erythro-7,8-di 21.9 3.5E+02 0.0076 20.3 6.5 60 196-258 46-107 (120)
35 PHA02754 hypothetical protein; 21.9 67 0.0015 21.1 1.6 18 188-205 42-59 (67)
36 PF04155 Ground-like: Ground-l 21.1 2.8E+02 0.0062 18.9 5.4 42 206-249 7-48 (76)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=2.9e-55 Score=397.98 Aligned_cols=287 Identities=89% Similarity=1.397 Sum_probs=256.6
Q ss_pred CCceEEEecCccccccCCCCCCCCeeEEEEEcCCCchHHHHHHHHHhHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhc
Q 023095 1 MEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEEFPQEIERVVASAFLQTDSAFAEAC 80 (287)
Q Consensus 1 ~ED~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~gG~~~~~~a~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~l~~~~ 80 (287)
|||+|++..++....+.......+..||||||||||+.+|++|++.+.+.+.+.......++++|.++|..+++.+....
T Consensus 79 nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~al~~af~~~d~~~~~~~ 158 (365)
T PLN03145 79 MEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEKVVSSAFLQTDTAFAEAC 158 (365)
T ss_pred CCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHhHHHHhhh
Confidence 89999987765433333333345578999999999999999999999999987666666778889999999999987765
Q ss_pred cccccCCCcceeEEEEEeCCeEEEEEcccceeEEeecCeeEecCCCCCCCChhHHHHHHhcCCEeecCcccCcccchhhc
Q 023095 81 SLDAALASGTTALAALVFGRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKEKKRIEASGGYVYDGYLNGQLNVARAL 160 (287)
Q Consensus 81 ~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~y~~r~~~~~~lt~dhs~~~~~~~~r~~~~~~~i~~~~~~g~~~~~~a~ 160 (287)
.......+|||++++++.++.+|++|+||||+|+++++++.+||+||++.++.|+.||.+.||.+..++..|.+.++|++
T Consensus 159 ~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~v~~g~v~g~l~vTRal 238 (365)
T PLN03145 159 SLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYVYDGYLNGQLNVARAL 238 (365)
T ss_pred ccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCceecceECCcccccccc
Confidence 54445569999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCCCCccccceEEEEEcCCCCeEEEEEcCcCcCccChhHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCC
Q 023095 161 GDWHVEGMKGADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKDLVDEALKRKS 240 (287)
Q Consensus 161 g~~~~~~~~~~~g~~~~~~p~~~~~~l~~gd~~lvL~SDGl~~~l~~~~i~~~i~~~~~~~~~~~~~a~~l~~~a~~~~~ 240 (287)
|+..++.+....+..+.++|++..+++.++|.||||||||||++++++++.+++.+.++...+++++|+.|++.|+.+++
T Consensus 239 GD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~rgs 318 (365)
T PLN03145 239 GDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKRKS 318 (365)
T ss_pred ccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCC
Confidence 99888765544555577899999999999999999999999999999999998887777777899999999999999999
Q ss_pred CCCeEEEEEEeCCCCCCCCcCCCCccccccchHHHHHHHHHHhhhCC
Q 023095 241 GDNLAVVVVCFQSQPPPNLIAPRSRVQRSFSAEGLRELQSFLDSLGN 287 (287)
Q Consensus 241 ~DN~T~ivi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (287)
.||+|+|||+|+..++|....+|++.+++++.+.++++++|+++|+|
T Consensus 319 ~DNITvIVV~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (365)
T PLN03145 319 GDNLAVVVVCFQSQPPPNLVAPRPRVQRSISAEGLRELQSFLDSLAN 365 (365)
T ss_pred CCCEEEEEEEeecCCCccccccccccccccCHHHHHHHHHhhhccCC
Confidence 99999999999999999999999999999999999999999999986
No 2
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=7.3e-41 Score=304.90 Aligned_cols=235 Identities=29% Similarity=0.530 Sum_probs=197.8
Q ss_pred CCceEEEecCccccccCCCCCCCCeeEEEEEcCCCchHHHHHHHHHhHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhc
Q 023095 1 MEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEEFPQEIERVVASAFLQTDSAFAEAC 80 (287)
Q Consensus 1 ~ED~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~gG~~~~~~a~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~l~~~~ 80 (287)
|||++++... .+..+|+|||||||..+++++++.+.+.+.+..... ..+.|.+++..+++.+....
T Consensus 36 nED~~~v~~~------------~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~~--~~~~l~~a~~~~d~~i~~~~ 101 (381)
T PTZ00224 36 MEDAHLLYLT------------DDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEPM--TDERMEELCLEIDEEWMDSG 101 (381)
T ss_pred CCCeeEeccC------------CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhccccc--cHHHHHHHHHHHHHHHHhcc
Confidence 7999887443 456799999999999999999999988875432221 12347889999999887543
Q ss_pred cccccCCCcceeEEEEEe-CCeEEEEEcccceeEEeecCeeEecCCCCCCCChhHHHHHHhcCCEeecCcccCcccchhh
Q 023095 81 SLDAALASGTTALAALVF-GRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKEKKRIEASGGYVYDGYLNGQLNVARA 159 (287)
Q Consensus 81 ~~~~~~~~gtT~~~~~i~-~~~l~~a~vGDsr~y~~r~~~~~~lt~dhs~~~~~~~~r~~~~~~~i~~~~~~g~~~~~~a 159 (287)
. .+|||++++++. +.+++++|+||||+|++|+|++.+||+||++.++.++.||.+.||.+..+|..|.+.++|+
T Consensus 102 ~-----~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~Rv~G~l~vTRa 176 (381)
T PTZ00224 102 R-----EGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACGGRVVSNRVDGDLAVSRA 176 (381)
T ss_pred c-----CCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHccCEeccccccCceeeecc
Confidence 2 368898887776 5799999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccCCC--CCCCCCccccceEEEEEcCCCCeEEEEEcCcCcC-ccChhHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 023095 160 LGDWHVEGMK--GADGGPLSAEPELMSTKLTEEDEFLIIACDGVWD-VFMSQNAVDFARRRLQEHNDPVMCSKDLVDEAL 236 (287)
Q Consensus 160 ~g~~~~~~~~--~~~g~~~~~~p~~~~~~l~~gd~~lvL~SDGl~~-~l~~~~i~~~i~~~~~~~~~~~~~a~~l~~~a~ 236 (287)
+|+..+|... ..+...+.++|++..+++.++| ||||||||||+ .++++++.+++.+.+....+++.+|+.|++.|+
T Consensus 177 lGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~D-~llLaSDGL~d~~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~ 255 (381)
T PTZ00224 177 FGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSND-FIILACDGVFEGNFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAI 255 (381)
T ss_pred cCCcccccccccccccCcceeeeEEEEEECCCCC-EEEEECCCcCcCccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 9997766442 1233345688999999999888 66699999999 799999999987655566789999999999999
Q ss_pred hcCCCCCeEEEEEEeCCCC
Q 023095 237 KRKSGDNLAVVVVCFQSQP 255 (287)
Q Consensus 237 ~~~~~DN~T~ivi~~~~~~ 255 (287)
.+|+.||+|+|||+|...+
T Consensus 256 ~rGs~DNITvIvV~~~~~~ 274 (381)
T PTZ00224 256 RRGSKDNISCLIVQLKDGA 274 (381)
T ss_pred hcCCCCCEEEEEEEeeCCC
Confidence 9999999999999999765
No 3
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=280.40 Aligned_cols=256 Identities=36% Similarity=0.646 Sum_probs=224.8
Q ss_pred CCceEEEecCccccccCCCCCCCCeeEEEEEcCCCchHHHHHHHHHhHHHHhhcCCChH--------HHHHHHHHHHHHH
Q 023095 1 MEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEEFPQ--------EIERVVASAFLQT 72 (287)
Q Consensus 1 ~ED~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~gG~~~~~~a~~~~~~~l~~~~~~~~--------~~~~~i~~~~~~~ 72 (287)
|||++...-.+-+-+ .++.||+|+|||.|++.+.++++.+.+.+.....+.. +.+.-|+..|..+
T Consensus 36 MEDah~A~~~l~~~l-------~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv~~~~~GIrtGFL~i 108 (379)
T KOG0697|consen 36 MEDAHTAVAGLPSPL-------EDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSVENVEKGIRTGFLSI 108 (379)
T ss_pred hhhhhhhhhcCCCCc-------cCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcHHHHHhhHhhcceeH
Confidence 899988766554332 7999999999999999999999999998877544433 6778899999999
Q ss_pred HHHHHHhccccc-cCCCcceeEEEEEeCCeEEEEEcccceeEEeecCeeEecCCCCCCCChhHHHHHHhcCCEeecCccc
Q 023095 73 DSAFAEACSLDA-ALASGTTALAALVFGRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKEKKRIEASGGYVYDGYLN 151 (287)
Q Consensus 73 ~~~l~~~~~~~~-~~~~gtT~~~~~i~~~~l~~a~vGDsr~y~~r~~~~~~lt~dhs~~~~~~~~r~~~~~~~i~~~~~~ 151 (287)
++.++...+... ..++|||++.+++.-..+|++|+||||++++|+|+.+.-|.||.+..|+++.||+.+||-+--.|++
T Consensus 109 DE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDHKP~~p~EkeRIqnAGGSVMIqRvN 188 (379)
T KOG0697|consen 109 DEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDHKPYLPKEKERIQNAGGSVMIQRVN 188 (379)
T ss_pred HHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCCCCCChHHHHHHhcCCCeEEEEEec
Confidence 998877655433 2349999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccchhhcCCccccCCCC--CCCCCccccceEEEEEcCCCCeEEEEEcCcCcCccChhHHHHHHHHHHhcCCCHHHHHH
Q 023095 152 GQLNVARALGDWHVEGMKG--ADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNAVDFARRRLQEHNDPVMCSK 229 (287)
Q Consensus 152 g~~~~~~a~g~~~~~~~~~--~~g~~~~~~p~~~~~~l~~gd~~lvL~SDGl~~~l~~~~i~~~i~~~~~~~~~~~~~a~ 229 (287)
|-+.++||+||..||.... .....++++|+++...-...|.|+||+|||+||.++++++-+++...+.-..+....+.
T Consensus 189 GsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn 268 (379)
T KOG0697|consen 189 GSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCN 268 (379)
T ss_pred ceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccchhhhcccHHHHHHHHhhheecccHHHHHH
Confidence 9999999999999997643 23355789999999988888889999999999999999999999988888889999999
Q ss_pred HHHHHHHhcCCCCCeEEEEEEeCCCCCCCCcCCC
Q 023095 230 DLVDEALKRKSGDNLAVVVVCFQSQPPPNLIAPR 263 (287)
Q Consensus 230 ~l~~~a~~~~~~DN~T~ivi~~~~~~~~~~~~~~ 263 (287)
.+++.++.+|++||+|+|+|.|-..|.++.-.-.
T Consensus 269 ~VvDtCLhKGSRDNMsivlvcfp~APkv~~eavk 302 (379)
T KOG0697|consen 269 DVVDTCLHKGSRDNMSIVLVCFPGAPKVSIEAVK 302 (379)
T ss_pred HHHHHHHhccCccCceEEEEecCCCCCCCHHHHH
Confidence 9999999999999999999999887776654443
No 4
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=6e-41 Score=293.24 Aligned_cols=236 Identities=43% Similarity=0.733 Sum_probs=192.8
Q ss_pred CCceEEEecCccccccCCCCCCCCeeEEEEEcCCCchHHHHHHHHHhHHHHhhcCCCh--HHHHHHHHHHHHH-HHHHHH
Q 023095 1 MEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEEFP--QEIERVVASAFLQ-TDSAFA 77 (287)
Q Consensus 1 ~ED~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~gG~~~~~~a~~~~~~~l~~~~~~~--~~~~~~i~~~~~~-~~~~l~ 77 (287)
|||++++..++.+. ..+.+..+|+|+|||||..++.+++..+.+.+.+..... ..+.+.|..+|.. ++..+.
T Consensus 14 ~eD~~~~~~~~~~~-----~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~~~~~~~~~ 88 (254)
T PF00481_consen 14 MEDRHLIIQNFNSN-----SGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFLAFTDESLY 88 (254)
T ss_dssp HHEEEEEEEEETCC-----TTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCEEEEecCcccc-----CCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceeeeccccccc
Confidence 68999998865322 124688999999999999999999999998776643222 2578889999999 888777
Q ss_pred HhccccccCCCcceeEEEEEeCCeEEEEEcccceeEEeecCeeE-ecCCCCCCCChhHHHHHHhcCCEee-cCcccCccc
Q 023095 78 EACSLDAALASGTTALAALVFGRRLVVANVGDCRAVLCRRGKAI-EMSRDHKPVCSKEKKRIEASGGYVY-DGYLNGQLN 155 (287)
Q Consensus 78 ~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~y~~r~~~~~-~lt~dhs~~~~~~~~r~~~~~~~i~-~~~~~g~~~ 155 (287)
..........+|||++++++.++++|++|+||||+|+++.+... +||+||++.++.|+.||.+.||.+. ..|+.|.+.
T Consensus 89 ~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~~~rv~g~l~ 168 (254)
T PF00481_consen 89 SDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVSENGRVNGVLA 168 (254)
T ss_dssp HHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEEETEEETTTBS
T ss_pred ccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeeccccccccchhhhhccc
Confidence 63221133459999999999999999999999999999999888 9999999999999999999999999 899999999
Q ss_pred chhhcCCccccCCCCCCCCCccccceEEEEEcCCCCeEEEEEcCcCcCccChhHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 023095 156 VARALGDWHVEGMKGADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKDLVDEA 235 (287)
Q Consensus 156 ~~~a~g~~~~~~~~~~~g~~~~~~p~~~~~~l~~gd~~lvL~SDGl~~~l~~~~i~~~i~~~~~~~~~~~~~a~~l~~~a 235 (287)
++|++|+..++... +.++.++|++..+++.++|.||||||||||++++++++.+++.+.......|+.+|+.|++.|
T Consensus 169 ~sRalGd~~~k~~~---~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A 245 (254)
T PF00481_consen 169 VSRALGDFDLKPPG---KPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAAEKLVDEA 245 (254)
T ss_dssp SSB-EE-GGGTTCT---SSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred cccccccccccccc---cceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 99999999888632 346899999999999999999999999999999999999999887665567999999999999
Q ss_pred HhcCCCCCe
Q 023095 236 LKRKSGDNL 244 (287)
Q Consensus 236 ~~~~~~DN~ 244 (287)
+.+|+.||+
T Consensus 246 ~~~gs~DNi 254 (254)
T PF00481_consen 246 IARGSKDNI 254 (254)
T ss_dssp HHTTHHSHE
T ss_pred HhcCCCCCC
Confidence 999999996
No 5
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=284.01 Aligned_cols=226 Identities=29% Similarity=0.419 Sum_probs=191.8
Q ss_pred CCceEEEecCccccccCCCCCCCCeeEEEEEcCCCchHHHHHHHHHhHHHHhhcCC-----C-hHHHHHHHHHHHHHHHH
Q 023095 1 MEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEE-----F-PQEIERVVASAFLQTDS 74 (287)
Q Consensus 1 ~ED~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~gG~~~~~~a~~~~~~~l~~~~~-----~-~~~~~~~i~~~~~~~~~ 74 (287)
+||++.+..+.. .+. ..+|+|||||||+.+|++|++.+++.|.+... . .+...+++.+.+..++.
T Consensus 23 NeD~~~~~~~~~--------~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~n~ 93 (262)
T COG0631 23 NEDAFLIKPNEN--------GNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEELLKEAILKANE 93 (262)
T ss_pred CCcceeeccccC--------Ccc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHH
Confidence 588888866411 112 57999999999999999999999988876411 1 11167899999999999
Q ss_pred HHHHhccc-cccCCCcceeEEEEEeCCeEEEEEcccceeEEeecCeeEecCCCCCCCChhHHHHHHhcCCEeecCcccCc
Q 023095 75 AFAEACSL-DAALASGTTALAALVFGRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKEKKRIEASGGYVYDGYLNGQ 153 (287)
Q Consensus 75 ~l~~~~~~-~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~y~~r~~~~~~lt~dhs~~~~~~~~r~~~~~~~i~~~~~~g~ 153 (287)
.+...... .....||||++++++.+++++++||||||+|++|+++++++|+||++.+..+++ +.
T Consensus 94 ~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~---------------~~ 158 (262)
T COG0631 94 AIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQR---------------GI 158 (262)
T ss_pred HHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHHHh---------------cC
Confidence 99887652 223459999999999999999999999999999999999999999999888886 66
Q ss_pred ccchhhcCCccccCCCCCCCCCccccceEEEEEcCCCCeEEEEEcCcCcCccChhHHHHHHHHHHhcCCCHHHHHHHHHH
Q 023095 154 LNVARALGDWHVEGMKGADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKDLVD 233 (287)
Q Consensus 154 ~~~~~a~g~~~~~~~~~~~g~~~~~~p~~~~~~l~~gd~~lvL~SDGl~~~l~~~~i~~~i~~~~~~~~~~~~~a~~l~~ 233 (287)
+.+..+.-++..+.+|+++|......|++...++.+++ |++|||||||+.++++++.+++. ...++++.++.|++
T Consensus 159 ~~~~~~~~~~~~~~ltralG~~~~~~p~~~~~~~~~~d-~llL~SDGl~d~v~~~~i~~il~----~~~~~~~~~~~li~ 233 (262)
T COG0631 159 ITPEEARSHPRRNALTRALGDFDLLEPDITELELEPGD-FLLLCSDGLWDVVSDDEIVDILK----NSETPQEAADKLIE 233 (262)
T ss_pred CCHHHHHhCccchhhhhhcCCCcccceeEEEEEcCCCC-EEEEECCCCccCcCHHHHHHHHh----cCCCHHHHHHHHHH
Confidence 77777777788888888888877799999999999996 66699999999999999988854 46789999999999
Q ss_pred HHHhcCCCCCeEEEEEEeCCCC
Q 023095 234 EALKRKSGDNLAVVVVCFQSQP 255 (287)
Q Consensus 234 ~a~~~~~~DN~T~ivi~~~~~~ 255 (287)
.|+.+++.||+|+++|.+...+
T Consensus 234 ~a~~~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 234 LALEGGGPDNITVVLVRLNGEG 255 (262)
T ss_pred HHHhcCCCCceEEEEEEeeccc
Confidence 9999999999999999988765
No 6
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-38 Score=286.98 Aligned_cols=248 Identities=44% Similarity=0.694 Sum_probs=211.2
Q ss_pred CCceEEEecCccccccCCCCCCC-CeeEEEEEcCCCchHHHHHHHHHhHHHHhhcCCChH---HHHHHHHHHHH-HHHHH
Q 023095 1 MEDVFLCVDNFMSDYGLKNLIDE-PSAFYGMFDGHGGKHAADFASCHLPRFITEDEEFPQ---EIERVVASAFL-QTDSA 75 (287)
Q Consensus 1 ~ED~~~~~~~~~~~~~~~~~~~~-~~~~~~V~DG~gG~~~~~~a~~~~~~~l~~~~~~~~---~~~~~i~~~~~-~~~~~ 75 (287)
|||++.....+.... .... ...+|||||||||..+|+++.+.+...+.+...... .++..+.++|. .++..
T Consensus 54 med~~~~~~~~~~~~----~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~~F~~~~D~~ 129 (330)
T KOG0698|consen 54 MEDRHVQLPDFLEED----VGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRRAFLTKTDSE 129 (330)
T ss_pred cCcceeecccccccc----cCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHH
Confidence 789988877754221 1123 689999999999999999999999998887644443 47889999999 58888
Q ss_pred HHHhccccccCCCcceeEEEEEeCC-eEEEEEcccceeEEeecC-eeEecCCCCCCCChhHHHHHHhcCCEeec----Cc
Q 023095 76 FAEACSLDAALASGTTALAALVFGR-RLVVANVGDCRAVLCRRG-KAIEMSRDHKPVCSKEKKRIEASGGYVYD----GY 149 (287)
Q Consensus 76 l~~~~~~~~~~~~gtT~~~~~i~~~-~l~~a~vGDsr~y~~r~~-~~~~lt~dhs~~~~~~~~r~~~~~~~i~~----~~ 149 (287)
+.... .....+|+|++++++.++ ++|++|+||||+++++.+ ...+||.||.+..+.|+.||.+.||.+.. .|
T Consensus 130 ~~~~~--~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~~~~~~R 207 (330)
T KOG0698|consen 130 FLEKR--EDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGRVSNWGGVWR 207 (330)
T ss_pred HHhhc--cCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEEEEcCCcce
Confidence 87651 112347888877777755 999999999999999865 89999999999999999999999999984 49
Q ss_pred ccCcccchhhcCCccccCCCCCCCCCccccceEEEEEcCCCCeEEEEEcCcCcCccChhHHHHHHHHHHhcCCCHHHHHH
Q 023095 150 LNGQLNVARALGDWHVEGMKGADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNAVDFARRRLQEHNDPVMCSK 229 (287)
Q Consensus 150 ~~g~~~~~~a~g~~~~~~~~~~~g~~~~~~p~~~~~~l~~gd~~lvL~SDGl~~~l~~~~i~~~i~~~~~~~~~~~~~a~ 229 (287)
..|.+.++|++||..++. ..+.++|++....+.+.|.||||+||||||.+++++..+++...+.....+..++.
T Consensus 208 v~G~LavsRa~GD~~~k~------~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~ 281 (330)
T KOG0698|consen 208 VNGVLAVSRAFGDVELKS------QGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAK 281 (330)
T ss_pred EeceEEEeeecCCHHhcC------CcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHH
Confidence 999999999999998884 35899999999999999999999999999999999999999876655778999999
Q ss_pred HHHHHHHhcCCCCCeEEEEEEeCCCCCCCCc
Q 023095 230 DLVDEALKRKSGDNLAVVVVCFQSQPPPNLI 260 (287)
Q Consensus 230 ~l~~~a~~~~~~DN~T~ivi~~~~~~~~~~~ 260 (287)
.+.+.+..+++.||+|+|||.|.+.+.++..
T Consensus 282 ~l~~~a~~~~s~DnitvvvV~l~~~~~~~~~ 312 (330)
T KOG0698|consen 282 LLATEALSRGSKDNITVVVVRLKSSPKSPSS 312 (330)
T ss_pred HHHHHHhhcCCCCCeEEEEEEecCccccccC
Confidence 9999999999999999999999988755444
No 7
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=4.8e-36 Score=287.50 Aligned_cols=217 Identities=20% Similarity=0.244 Sum_probs=165.2
Q ss_pred CeeEEEEEcCCCchHHHHHHHHHhHHHHhhc----CCChHHHHHHHHHHHHHHHHHHHHhcccc---ccCCCcceeEEEE
Q 023095 24 PSAFYGMFDGHGGKHAADFASCHLPRFITED----EEFPQEIERVVASAFLQTDSAFAEACSLD---AALASGTTALAAL 96 (287)
Q Consensus 24 ~~~~~~V~DG~gG~~~~~~a~~~~~~~l~~~----~~~~~~~~~~i~~~~~~~~~~l~~~~~~~---~~~~~gtT~~~~~ 96 (287)
+..+|+|||||||+.+|+.||+.+++.|.+. ........+.+.++|..+|+.+....... ...+||||+++++
T Consensus 413 ~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~al 492 (645)
T PRK14559 413 ARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDELPDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMAL 492 (645)
T ss_pred cceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEE
Confidence 4578999999999999988888877776541 11111135678999999999998754332 2335999999999
Q ss_pred EeCCeEEEEEcccceeEEee-cCeeEecCCCCCCCChhHHHHHHhcCCEeecCcccCcccchhhcCCccccCCCCCCCCC
Q 023095 97 VFGRRLVVANVGDCRAVLCR-RGKAIEMSRDHKPVCSKEKKRIEASGGYVYDGYLNGQLNVARALGDWHVEGMKGADGGP 175 (287)
Q Consensus 97 i~~~~l~~a~vGDsr~y~~r-~~~~~~lt~dhs~~~~~~~~r~~~~~~~i~~~~~~g~~~~~~a~g~~~~~~~~~~~g~~ 175 (287)
+.++++|++||||||+|+++ +|++.++|+||++.+.+.++ | +....+.+++..+.+++++|..
T Consensus 493 I~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~lv~~---------------G-i~~~~a~~~p~~~~LTrALG~~ 556 (645)
T PRK14559 493 VQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQREIQR---------------G-VEPQIAYARPDAYQLTQALGPR 556 (645)
T ss_pred EECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHHHHHh---------------C-CCHHHHhcCcccceeeeccCCC
Confidence 99999999999999999985 68999999999987654432 3 2334455566666777777753
Q ss_pred --ccccceEEEEEcCCCCeEEEEEcCcCcCc-cChhHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCCCeEEEEEEeC
Q 023095 176 --LSAEPELMSTKLTEEDEFLIIACDGVWDV-FMSQNAVDFARRRLQEHNDPVMCSKDLVDEALKRKSGDNLAVVVVCFQ 252 (287)
Q Consensus 176 --~~~~p~~~~~~l~~gd~~lvL~SDGl~~~-l~~~~i~~~i~~~~~~~~~~~~~a~~l~~~a~~~~~~DN~T~ivi~~~ 252 (287)
...+|++..+.+.++|.|| |||||||++ +.+..+.+.+...+....+++++++.|++.|+.++++||+|+|||+++
T Consensus 557 ~~~~l~Pdi~~~~L~~gD~lL-LCSDGL~D~~~ve~~~~~~l~~il~~~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~ 635 (645)
T PRK14559 557 DNSAIQPDIQFLEIEEDTLLL-LCSDGLSDNDLLETHWQTHLLPLLSSSANLDQGLNKLIDLANQYNGHDNITAILVRLK 635 (645)
T ss_pred CCCcccceEEEEEcCCCCEEE-EECCCCCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCcEEEEEEEec
Confidence 2358999999999887555 999999994 333344444444455667899999999999999999999999999998
Q ss_pred CCCCC
Q 023095 253 SQPPP 257 (287)
Q Consensus 253 ~~~~~ 257 (287)
..|.-
T Consensus 636 ~~p~~ 640 (645)
T PRK14559 636 VRPQL 640 (645)
T ss_pred cCCCC
Confidence 66654
No 8
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=3.5e-35 Score=255.54 Aligned_cols=233 Identities=45% Similarity=0.715 Sum_probs=195.9
Q ss_pred CCceEEEecCccccccCCCCCCCCeeEEEEEcCCCchHHHHHHHHHhHHHHhhcCC-----ChHHHHHHHHHHHHHHHHH
Q 023095 1 MEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEE-----FPQEIERVVASAFLQTDSA 75 (287)
Q Consensus 1 ~ED~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~gG~~~~~~a~~~~~~~l~~~~~-----~~~~~~~~i~~~~~~~~~~ 75 (287)
.||++++..... ..+..+|+||||+||+..+++|++.+++.+.+... ....+...+.++|+.+++.
T Consensus 15 neD~~~~~~~~~---------~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 85 (254)
T cd00143 15 NEDAVVIKPNLN---------NEDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFLRADEE 85 (254)
T ss_pred CcceEEEeccCC---------CCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHH
Confidence 489999876510 02789999999999999999999999998876432 2456778899999999999
Q ss_pred HHHhcccc-ccCCCcceeEEEEEeCCeEEEEEcccceeEEeecCeeEecCCCCCCCChhHHHHHHhcCCEeecCcccCcc
Q 023095 76 FAEACSLD-AALASGTTALAALVFGRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKEKKRIEASGGYVYDGYLNGQL 154 (287)
Q Consensus 76 l~~~~~~~-~~~~~gtT~~~~~i~~~~l~~a~vGDsr~y~~r~~~~~~lt~dhs~~~~~~~~r~~~~~~~i~~~~~~g~~ 154 (287)
+....... ....+|||++++++.+++++++|+||||+|+++++++.++|.||++.++.+..|+...++.+......+..
T Consensus 86 l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~~~~~~~~ 165 (254)
T cd00143 86 ILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVSNGRVPGVL 165 (254)
T ss_pred HHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEEeCEEcCce
Confidence 98765432 23348999999999999999999999999999999999999999999999999999999987777777888
Q ss_pred cchhhcCCccccCCCCCCCCCccccceEEEEEc-CCCCeEEEEEcCcCcCccChhHHHHHHHHHHhcCCCHHHHHHHHHH
Q 023095 155 NVARALGDWHVEGMKGADGGPLSAEPELMSTKL-TEEDEFLIIACDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKDLVD 233 (287)
Q Consensus 155 ~~~~a~g~~~~~~~~~~~g~~~~~~p~~~~~~l-~~gd~~lvL~SDGl~~~l~~~~i~~~i~~~~~~~~~~~~~a~~l~~ 233 (287)
.+++++|...++. ....+|++...++ +++|. |+|||||||++++++++.+++.... ...+++++|+.|++
T Consensus 166 ~~t~~lG~~~~~~-------~~~~~~~~~~~~l~~~~d~-ill~SDG~~~~l~~~~i~~~~~~~~-~~~~~~~~a~~l~~ 236 (254)
T cd00143 166 AVTRALGDFDLKP-------GVSAEPDVTVVKLTEDDDF-LILASDGLWDVLSNQEAVDIVRSEL-AKEDLQEAAQELVD 236 (254)
T ss_pred eeccccCCccccC-------CEEcCCeEEEEEeCCCCcE-EEEECCCCeeccChHHHHHHHHHHh-cccCHHHHHHHHHH
Confidence 8999999876552 2577899999999 77775 5599999999999999999876531 11279999999999
Q ss_pred HHHhcCCCCCeEEEEEEe
Q 023095 234 EALKRKSGDNLAVVVVCF 251 (287)
Q Consensus 234 ~a~~~~~~DN~T~ivi~~ 251 (287)
.+..++..||+|+|++.|
T Consensus 237 ~a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 237 LALRRGSHDNITVVVVRL 254 (254)
T ss_pred HHHhCCCCCCEEEEEEeC
Confidence 999999999999999875
No 9
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1e-34 Score=253.12 Aligned_cols=230 Identities=44% Similarity=0.760 Sum_probs=195.6
Q ss_pred CCceEEEecCccccccCCCCCCCCeeEEEEEcCCCchHHHHHHHHHhHHHHhhcCCCh----HHHHHHHHHHHHHHHHHH
Q 023095 1 MEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEEFP----QEIERVVASAFLQTDSAF 76 (287)
Q Consensus 1 ~ED~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~gG~~~~~~a~~~~~~~l~~~~~~~----~~~~~~i~~~~~~~~~~l 76 (287)
.||++++..+. +.+..+|+||||+||..+++++++.+.+.+.+..... ..+.+.|.+++..+++.+
T Consensus 20 neD~~~~~~~~----------~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 89 (255)
T smart00332 20 MEDAHVITPDL----------SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLKTDEEI 89 (255)
T ss_pred CcceEEEeccC----------CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHH
Confidence 48988886652 2678899999999999999999999999887643222 357788999999999999
Q ss_pred HHhccccc-cCCCcceeEEEEEeCCeEEEEEcccceeEEeecCeeEecCCCCCCCChhHHHHHHhcCCEeecCcccCccc
Q 023095 77 AEACSLDA-ALASGTTALAALVFGRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKEKKRIEASGGYVYDGYLNGQLN 155 (287)
Q Consensus 77 ~~~~~~~~-~~~~gtT~~~~~i~~~~l~~a~vGDsr~y~~r~~~~~~lt~dhs~~~~~~~~r~~~~~~~i~~~~~~g~~~ 155 (287)
........ ...+|||++++++..+.++++|+||||+|+++++++.++|+||++.++.+..|+...++.+..++..+...
T Consensus 90 ~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 169 (255)
T smart00332 90 LEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVINGRVNGVLA 169 (255)
T ss_pred HHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEECCeECCeEe
Confidence 87654432 23489999999999999999999999999999999999999999999999999999999988888888889
Q ss_pred chhhcCCccccCCCCCCCCCccccceEEEEEc-CCCCeEEEEEcCcCcCccChhHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 023095 156 VARALGDWHVEGMKGADGGPLSAEPELMSTKL-TEEDEFLIIACDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKDLVDE 234 (287)
Q Consensus 156 ~~~a~g~~~~~~~~~~~g~~~~~~p~~~~~~l-~~gd~~lvL~SDGl~~~l~~~~i~~~i~~~~~~~~~~~~~a~~l~~~ 234 (287)
+++++|...+++ .+..+|++...++ .++|. |+|||||||++++++++.+++.+.... .++.++++.|.+.
T Consensus 170 lt~~~g~~~~~~-------~i~~~p~~~~~~~~~~~d~-ill~SDGv~~~l~~~~i~~~~~~~~~~-~~~~~~~~~l~~~ 240 (255)
T smart00332 170 LSRAIGDFFLKP-------YVSAEPDVTVVELTEKDDF-LILASDGLWDVLSNQEVVDIVRKHLSK-SDPEEAAKRLIDL 240 (255)
T ss_pred cccccCCHhhcC-------CeEeeeEEEEEEecCCCcE-EEEECCccccCCCHHHHHHHHHHHhhc-CCHHHHHHHHHHH
Confidence 999999876653 3678899998886 77775 559999999999999999998754322 3699999999999
Q ss_pred HHhcCCCCCeEEEEE
Q 023095 235 ALKRKSGDNLAVVVV 249 (287)
Q Consensus 235 a~~~~~~DN~T~ivi 249 (287)
|..++..||+|+|+|
T Consensus 241 a~~~~~~Dn~T~ivv 255 (255)
T smart00332 241 ALARGSKDNITVIVV 255 (255)
T ss_pred HHHcCCCCCeEEEEC
Confidence 999999999999985
No 10
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-34 Score=246.43 Aligned_cols=168 Identities=43% Similarity=0.691 Sum_probs=154.8
Q ss_pred CCcceeEEEEEeCCeEEEEEcccceeEEeecCeeEecCCCCCCCChhHHHHHHhcCCEee-cCcccCcccchhhcCCccc
Q 023095 87 ASGTTALAALVFGRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKEKKRIEASGGYVY-DGYLNGQLNVARALGDWHV 165 (287)
Q Consensus 87 ~~gtT~~~~~i~~~~l~~a~vGDsr~y~~r~~~~~~lt~dhs~~~~~~~~r~~~~~~~i~-~~~~~g~~~~~~a~g~~~~ 165 (287)
.+|||++++++.+.++++||.|||||++.|+|+.+-++.||.|....+-+||.++||.+. ++|++|.+++.|+||++.|
T Consensus 329 DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlDGRVNGGLNLSRA~GDHaY 408 (542)
T KOG0699|consen 329 DSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLDGRVNGGLNLSRAFGDHAY 408 (542)
T ss_pred CCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeecceecCccchhhhhhhhhh
Confidence 489999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred cCCCCC--CCCCccccceEEEEEcCCCCeEEEEEcCcCcCccChhHHHHHHHHHHhcCCCHHHHHHHHHHHHHhc-----
Q 023095 166 EGMKGA--DGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKDLVDEALKR----- 238 (287)
Q Consensus 166 ~~~~~~--~g~~~~~~p~~~~~~l~~gd~~lvL~SDGl~~~l~~~~i~~~i~~~~~~~~~~~~~a~~l~~~a~~~----- 238 (287)
|..... --.++.+-|++....|++.|.|+|++|||||++++.+++.++++..+........+++.|.+.+++-
T Consensus 409 K~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~iceeL~D~CLAp~T~GD 488 (542)
T KOG0699|consen 409 KKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEICEELCDACLAPSTDGD 488 (542)
T ss_pred hcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHHHHHHHHhhcCCCCCCC
Confidence 865322 1355788999999999999999999999999999999999999998888888999999999999863
Q ss_pred -CCCCCeEEEEEEeCCC
Q 023095 239 -KSGDNLAVVVVCFQSQ 254 (287)
Q Consensus 239 -~~~DN~T~ivi~~~~~ 254 (287)
.+.||+|+|++.|++-
T Consensus 489 GTGCDNMT~ii~~Fkrk 505 (542)
T KOG0699|consen 489 GTGCDNMTVIITTFKRK 505 (542)
T ss_pred CcCCCcceEEEEEeccc
Confidence 3789999999999953
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-33 Score=248.52 Aligned_cols=218 Identities=33% Similarity=0.483 Sum_probs=183.2
Q ss_pred CCCeeEEEEEcCCCchHHHHHHHHHhHHHHhh------------cCC----------------------ChHHHHHHHHH
Q 023095 22 DEPSAFYGMFDGHGGKHAADFASCHLPRFITE------------DEE----------------------FPQEIERVVAS 67 (287)
Q Consensus 22 ~~~~~~~~V~DG~gG~~~~~~a~~~~~~~l~~------------~~~----------------------~~~~~~~~i~~ 67 (287)
.+++.|+||+|||||.+++++.++.+..++.. ... ......++|.+
T Consensus 96 ~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~ 175 (390)
T KOG0700|consen 96 ENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSK 175 (390)
T ss_pred cCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHH
Confidence 58999999999999999999999999998872 111 14567889999
Q ss_pred HHHHHHHHHHHhc----cccccCC-CcceeEEEEEeCCeEEEEEcccceeEEee---cC---eeEecCCCCCCCChhHHH
Q 023095 68 AFLQTDSAFAEAC----SLDAALA-SGTTALAALVFGRRLVVANVGDCRAVLCR---RG---KAIEMSRDHKPVCSKEKK 136 (287)
Q Consensus 68 ~~~~~~~~l~~~~----~~~~~~~-~gtT~~~~~i~~~~l~~a~vGDsr~y~~r---~~---~~~~lt~dhs~~~~~~~~ 136 (287)
||.+.++.+.... ...+... +|+|+++.++.++.+|+||+||||+++-+ ++ ...|||.||+..++.+.+
T Consensus 176 Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~ 255 (390)
T KOG0700|consen 176 AFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVR 255 (390)
T ss_pred HHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHH
Confidence 9999999986543 2333333 89999999999999999999999999853 33 578999999999999999
Q ss_pred HHHhcCC----EeecC--cccCcccchhhcCCccccCCC--------------CCCCCCccccceEEEEEcCCCCeEEEE
Q 023095 137 RIEASGG----YVYDG--YLNGQLNVARALGDWHVEGMK--------------GADGGPLSAEPELMSTKLTEEDEFLII 196 (287)
Q Consensus 137 r~~~~~~----~i~~~--~~~g~~~~~~a~g~~~~~~~~--------------~~~g~~~~~~p~~~~~~l~~gd~~lvL 196 (287)
||...|. .+..+ |+.|.+.++||||+.++|... ....|++.++|.++.++|.+.|+||||
T Consensus 256 Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIl 335 (390)
T KOG0700|consen 256 RIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLIL 335 (390)
T ss_pred HHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEE
Confidence 9999984 44455 999999999999999988653 223577899999999999999999999
Q ss_pred EcCcCcCccChhHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcC
Q 023095 197 ACDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKDLVDEALKRK 239 (287)
Q Consensus 197 ~SDGl~~~l~~~~i~~~i~~~~~~~~~~~~~a~~l~~~a~~~~ 239 (287)
+|||+|++|+++|+..++..++.....-+.+|+.|+++|+.+.
T Consensus 336 ASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~a 378 (390)
T KOG0700|consen 336 ASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRA 378 (390)
T ss_pred eccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhh
Confidence 9999999999999999999877654555678999999997643
No 12
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.91 E-value=6.3e-23 Score=177.07 Aligned_cols=203 Identities=17% Similarity=0.265 Sum_probs=139.9
Q ss_pred CceEEEecCccccccCCCCCCCCeeEEEEEcCCCchHH-----HHHHHHHh---HHHHhhcCCChHHHHHHHHHHHHHHH
Q 023095 2 EDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHA-----ADFASCHL---PRFITEDEEFPQEIERVVASAFLQTD 73 (287)
Q Consensus 2 ED~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~gG~~~-----~~~a~~~~---~~~l~~~~~~~~~~~~~i~~~~~~~~ 73 (287)
||+|++.++ ....+.|||||+|||.- +.+..+.+ .+.+.+....+..+...|.+++
T Consensus 92 EDa~Fvss~------------~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay---- 155 (330)
T KOG1379|consen 92 EDAWFVSSN------------PHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAY---- 155 (330)
T ss_pred CcceeeccC------------cccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHH----
Confidence 899999887 77889999999998873 33333222 2333333444445655555554
Q ss_pred HHHHHhccccccCCCcceeEEEEEe--CCeEEEEEcccceeEEeecCeeEecCCCCCC--CChhHHHHHHhcCCEeecCc
Q 023095 74 SAFAEACSLDAALASGTTALAALVF--GRRLVVANVGDCRAVLCRRGKAIEMSRDHKP--VCSKEKKRIEASGGYVYDGY 149 (287)
Q Consensus 74 ~~l~~~~~~~~~~~~gtT~~~~~i~--~~~l~~a~vGDsr~y~~r~~~~~~lt~dhs~--~~~~~~~r~~~~~~~i~~~~ 149 (287)
.++... +...-+++|++++.+. +++|+++|+|||...++|+|++++-|..+.+ +.|-.
T Consensus 156 ~~l~~~---~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN~PyQ--------------- 217 (330)
T KOG1379|consen 156 AELKSQ---KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFNTPYQ--------------- 217 (330)
T ss_pred HHHhhc---CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccCCcee---------------
Confidence 444332 1112267788888887 8899999999999999999999998876552 22210
Q ss_pred ccCcccchhhcCCccccCCCCCCCCCccccceEEEEEcCCCCeEEEEEcCcCcCccChhHHHHHHHHHHh-cCCCHHHHH
Q 023095 150 LNGQLNVARALGDWHVEGMKGADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNAVDFARRRLQ-EHNDPVMCS 228 (287)
Q Consensus 150 ~~g~~~~~~a~g~~~~~~~~~~~g~~~~~~p~~~~~~l~~gd~~lvL~SDGl~~~l~~~~i~~~i~~~~~-~~~~~~~~a 228 (287)
-+++-+.+ ..++++ .....+.+.+++++||.+| ++|||+||++.+++|..++..... ...+++..|
T Consensus 218 --------Ls~~p~~~---~~~~~d-~p~~ad~~~~~v~~GDvIi-lATDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A 284 (330)
T KOG1379|consen 218 --------LSSPPEGY---SSYISD-VPDSADVTSFDVQKGDVII-LATDGLFDNLPEKEILSILKGLDARGNLDLQVTA 284 (330)
T ss_pred --------eccCCccc---cccccC-CccccceEEEeccCCCEEE-EecccccccccHHHHHHHHHHhhccccccHHHHH
Confidence 01111111 001111 2344577899999999655 999999999999999999987665 667899999
Q ss_pred HHHHHHHHhc-----------------------CCCCCeEEEEEEe
Q 023095 229 KDLVDEALKR-----------------------KSGDNLAVVVVCF 251 (287)
Q Consensus 229 ~~l~~~a~~~-----------------------~~~DN~T~ivi~~ 251 (287)
+.+++.|... |..||||+|+..+
T Consensus 285 ~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 285 QKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred HHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 9999999632 4589999999753
No 13
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.90 E-value=4.2e-22 Score=172.29 Aligned_cols=233 Identities=31% Similarity=0.461 Sum_probs=172.1
Q ss_pred CCCeeEEEEEcCCCchHHHHHHHHHhHHHHhhc--------------------------------------CCC-hH-HH
Q 023095 22 DEPSAFYGMFDGHGGKHAADFASCHLPRFITED--------------------------------------EEF-PQ-EI 61 (287)
Q Consensus 22 ~~~~~~~~V~DG~gG~~~~~~a~~~~~~~l~~~--------------------------------------~~~-~~-~~ 61 (287)
.-++.+|.+||||.|+.++-.|++.+-+.+.+. ... .+ -.
T Consensus 141 ~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LV 220 (493)
T KOG1323|consen 141 RADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLV 220 (493)
T ss_pred CCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhh
Confidence 457889999999999999988887665444320 000 11 23
Q ss_pred HHHHHHHHHHHHHHHHHhccccccCCCcceeEEEEEeCCeEEEEEcccceeEEeecCeeEecCCCCCCCChhHHHHHHhc
Q 023095 62 ERVVASAFLQTDSAFAEACSLDAALASGTTALAALVFGRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKEKKRIEAS 141 (287)
Q Consensus 62 ~~~i~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~y~~r~~~~~~lt~dhs~~~~~~~~r~~~~ 141 (287)
.-+++.+|+.++.+|....+.. ...+|||++++++-.+++|++|.||||++++|++++..++.+-++.+ |++|+|..
T Consensus 221 iGAlEsAFqemDeqiarer~~~-~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPet--ERqRlQ~L 297 (493)
T KOG1323|consen 221 IGALESAFQEMDEQIARERQVW-RLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPET--ERQRLQEL 297 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-cCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcHH--HHHHHHHH
Confidence 4578888998888887654333 22389999999999999999999999999999999999999988754 56776554
Q ss_pred C--------CEeecC-----------------------------------------------cccCcccchhhcCCcccc
Q 023095 142 G--------GYVYDG-----------------------------------------------YLNGQLNVARALGDWHVE 166 (287)
Q Consensus 142 ~--------~~i~~~-----------------------------------------------~~~g~~~~~~a~g~~~~~ 166 (287)
. +.+... |+-+-+.++|.+||++.+
T Consensus 298 af~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lk 377 (493)
T KOG1323|consen 298 AFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLK 377 (493)
T ss_pred hhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceee
Confidence 2 221100 222344589999999998
Q ss_pred CCCCC--CCCCccccceEEEEEcCC----CCeEEEEEcCcCcCccChhHHHHHHHHHHhcC--CCHH---HHHHHHHHHH
Q 023095 167 GMKGA--DGGPLSAEPELMSTKLTE----EDEFLIIACDGVWDVFMSQNAVDFARRRLQEH--NDPV---MCSKDLVDEA 235 (287)
Q Consensus 167 ~~~~~--~g~~~~~~p~~~~~~l~~----gd~~lvL~SDGl~~~l~~~~i~~~i~~~~~~~--~~~~---~~a~~l~~~a 235 (287)
.+.+. +.++..+.|++..+.+.+ .|.++||+|||+||.++++++..++...+... .+|. .+|+.++..|
T Consensus 378 v~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~a 457 (493)
T KOG1323|consen 378 VVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAA 457 (493)
T ss_pred eecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHh
Confidence 88764 468888999998877652 24577899999999999999999998876433 3444 4678888777
Q ss_pred Hh-------------cCCCCCeEEEEEEeCCCCCC
Q 023095 236 LK-------------RKSGDNLAVVVVCFQSQPPP 257 (287)
Q Consensus 236 ~~-------------~~~~DN~T~ivi~~~~~~~~ 257 (287)
.. .++.||+||.||-+.....|
T Consensus 458 rg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~~~~ 492 (493)
T KOG1323|consen 458 RGQQKDRGWRMNNGGLGSGDDISVFVIPLKYCAAP 492 (493)
T ss_pred cCccCCCceeccCCCcCCCCceEEEEEeccCCCCC
Confidence 42 24789999999988765443
No 14
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.82 E-value=2.1e-19 Score=152.79 Aligned_cols=171 Identities=22% Similarity=0.265 Sum_probs=93.6
Q ss_pred CceEEEecCccccccCCCCCCCCeeEEEEEcCCCchHHHHHHHHHhH----HHHhhcCCChHH--HHHHHHHHHHHHHHH
Q 023095 2 EDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLP----RFITEDEEFPQE--IERVVASAFLQTDSA 75 (287)
Q Consensus 2 ED~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~gG~~~~~~a~~~~~----~~l~~~~~~~~~--~~~~i~~~~~~~~~~ 75 (287)
||++.+... .++.+++||||+||...+..+++.++ +++.+....... .++.+..+...+...
T Consensus 13 qD~~~~~~~------------~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (212)
T PF13672_consen 13 QDAFGIRTD------------DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEILSI 80 (212)
T ss_dssp -EEEEEE-T------------CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEeeeC------------CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHH
Confidence 789987665 66677799999997776666555554 444444443332 222333333233322
Q ss_pred H----HHhccccccCCCcceeEEEEEeCCeEEEEEcccceeEE-eecCeeEecCCCCCCCChhHHHHHHhcCCEeecCcc
Q 023095 76 F----AEACSLDAALASGTTALAALVFGRRLVVANVGDCRAVL-CRRGKAIEMSRDHKPVCSKEKKRIEASGGYVYDGYL 150 (287)
Q Consensus 76 l----~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~y~-~r~~~~~~lt~dhs~~~~~~~~r~~~~~~~i~~~~~ 150 (287)
+ ...........++||++++++.++.++++|+||||+|+ .+++++..++.+|+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~~~~------------------ 142 (212)
T PF13672_consen 81 VRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSGEYP------------------ 142 (212)
T ss_dssp H----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BHHHH------------------
T ss_pred hhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccchhh------------------
Confidence 1 01111222334899999999999999999999999975 578999999999972100
Q ss_pred cCcccchhhcCCccccCCCCCCCCCccccceEEEEEcCCCCeEEEEEcCcCcCccChhH-HHHHHHHHH
Q 023095 151 NGQLNVARALGDWHVEGMKGADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQN-AVDFARRRL 218 (287)
Q Consensus 151 ~g~~~~~~a~g~~~~~~~~~~~g~~~~~~p~~~~~~l~~gd~~lvL~SDGl~~~l~~~~-i~~~i~~~~ 218 (287)
..+..+... ......++...++.+++.|+ |||||||+.+...+ +..++.+.+
T Consensus 143 ----~~~~~~~~~-----------~~~~~~~~~~~~~~~~d~il-L~SDG~~~~l~~~~~~~~~l~~~~ 195 (212)
T PF13672_consen 143 ----NQTRSLTGD-----------DPEPDVQYGSIPLEEGDVIL-LCSDGVWDNLRSYEDLEQFLKDLW 195 (212)
T ss_dssp ----HCTTSCCHH-----------CCCTETEEEEEE--TT-EEE-EE-HHHHTTS-HHHHHHHH-----
T ss_pred ----hhhhccCcc-----------ccccCCeEEEEEcCCCCEEE-EECcCccccCCCHHHHHHHhhhcc
Confidence 111111111 12334467778888899766 99999999998654 666655543
No 15
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.80 E-value=9.1e-18 Score=140.59 Aligned_cols=163 Identities=20% Similarity=0.149 Sum_probs=119.7
Q ss_pred CCCeeEEEEEcCCCchHHHHHHHHHhHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhccccccCCCcceeEEEEE--eC
Q 023095 22 DEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEEFPQEIERVVASAFLQTDSAFAEACSLDAALASGTTALAALV--FG 99 (287)
Q Consensus 22 ~~~~~~~~V~DG~gG~~~~~~a~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i--~~ 99 (287)
+++..+++|+||+|+...|.+++..+...+.+...... .+.+.+..+++.+.... ...+++|++++++ ..
T Consensus 27 ~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~----~~~~~l~~~n~~l~~~~----~~~~~~T~~~~~id~~~ 98 (193)
T smart00331 27 PEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGI----SLSQILERLNRAIYENG----EDGMFATLFLALYDFAG 98 (193)
T ss_pred CCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCC----CHHHHHHHHHHHHHhcC----CCCcEEEEEEEEEECCC
Confidence 46689999999999888888888888887765432211 24556777777776551 2247999999988 57
Q ss_pred CeEEEEEcccceeEEee-cCeeEecCCCCCCCChhHHHHHHhcCCEeecCcccCcccchhhcCCccccCCCCCCCCCccc
Q 023095 100 RRLVVANVGDCRAVLCR-RGKAIEMSRDHKPVCSKEKKRIEASGGYVYDGYLNGQLNVARALGDWHVEGMKGADGGPLSA 178 (287)
Q Consensus 100 ~~l~~a~vGDsr~y~~r-~~~~~~lt~dhs~~~~~~~~r~~~~~~~i~~~~~~g~~~~~~a~g~~~~~~~~~~~g~~~~~ 178 (287)
++++++|+||+|+|+++ ++...+.+.+.+ ..+|. ....
T Consensus 99 ~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~~-----------------------------~~lG~------------~~~~ 137 (193)
T smart00331 99 GTLSYANAGHSPPYLLRADGGLVEDLDDLG-----------------------------APLGL------------EPDV 137 (193)
T ss_pred CEEEEEeCCCCceEEEECCCCeEEEcCCCC-----------------------------ceeee------------CCCC
Confidence 79999999999999998 555555555422 12222 2234
Q ss_pred cceEEEEEcCCCCeEEEEEcCcCcCccChhHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 023095 179 EPELMSTKLTEEDEFLIIACDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKDLVDEAL 236 (287)
Q Consensus 179 ~p~~~~~~l~~gd~~lvL~SDGl~~~l~~~~i~~~i~~~~~~~~~~~~~a~~l~~~a~ 236 (287)
++....+++.+||.++ |+|||+|+.+.++++.+++.+. ...++++.++++.+.+.
T Consensus 138 ~~~~~~~~l~~gd~l~-l~TDGl~e~~~~~~l~~~l~~~--~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 138 EVDVRELTLEPGDLLL-LYTDGLTEARNPERLEELLEEL--LGSPPAEIAQRILEELL 192 (193)
T ss_pred cceeEEEeeCCCCEEE-EECCCccccCChHHHHHHHHHh--cCCCHHHHHHHHHHHHh
Confidence 4677888999999766 9999999999998888887753 23568888888877653
No 16
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.78 E-value=2.5e-18 Score=166.20 Aligned_cols=219 Identities=29% Similarity=0.487 Sum_probs=185.8
Q ss_pred CCCCCeeEEEEEcCCCchHHHHHHHHHhHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhccccccCCCcceeEEEEEe-
Q 023095 20 LIDEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEEFPQEIERVVASAFLQTDSAFAEACSLDAALASGTTALAALVF- 98 (287)
Q Consensus 20 ~~~~~~~~~~V~DG~gG~~~~~~a~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~- 98 (287)
+-.+...+||.+||-+......+....+..++.++-....+-.+.|..+|...++++....+. .|..++.+.+.
T Consensus 546 f~~~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et~~mr~~fl~~~rklg~~g~~-----lg~~~~~~~i~~ 620 (1081)
T KOG0618|consen 546 FFLNPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNETEQMRNTFLRLNRKLGEEGQV-----LGGSVVLCQIVE 620 (1081)
T ss_pred cccCCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHhhhhhhhhcc-----ccchhhheeecc
Confidence 345788899999999999999999999999998764444333455899999999999665443 34444444444
Q ss_pred -------CCeEEEEEcccceeEEeecCeeEecCCCC-CCCChhHHHHHHhcCCEee-cCcccCcccchhhcCCccccCCC
Q 023095 99 -------GRRLVVANVGDCRAVLCRRGKAIEMSRDH-KPVCSKEKKRIEASGGYVY-DGYLNGQLNVARALGDWHVEGMK 169 (287)
Q Consensus 99 -------~~~l~~a~vGDsr~y~~r~~~~~~lt~dh-s~~~~~~~~r~~~~~~~i~-~~~~~g~~~~~~a~g~~~~~~~~ 169 (287)
..+++.||+|+|.++++++|+..+.|+-. ....++|.+||..++|.+. +++++|.+..+|++|.....+
T Consensus 621 d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i~ed~k~ngvt~~tR~iG~~~l~P-- 698 (1081)
T KOG0618|consen 621 DSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGFITEDNKLNGVTSSTRAIGPFSLFP-- 698 (1081)
T ss_pred cccCcccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHHHHHHhcCeecCCCeeeceeeeeeecccccccc--
Confidence 24899999999999999999988887665 4448899999999999999 999999999999999876544
Q ss_pred CCCCCCccccceEEEEEcCCCCeEEEEEcCcCcCccChhHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCCCeEEEEE
Q 023095 170 GADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKDLVDEALKRKSGDNLAVVVV 249 (287)
Q Consensus 170 ~~~g~~~~~~p~~~~~~l~~gd~~lvL~SDGl~~~l~~~~i~~~i~~~~~~~~~~~~~a~~l~~~a~~~~~~DN~T~ivi 249 (287)
.+.++|++....+.+.|.|||+++-++|++++-++..+.++ +..+|-.+|++|.+.|++.|..||++++||
T Consensus 699 -----~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vR----n~~dpL~AAkKL~d~AqSYgc~~nv~vlVv 769 (1081)
T KOG0618|consen 699 -----HVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVR----NVEDPLLAAKKLCDLAQSYGCAENVSVLVV 769 (1081)
T ss_pred -----cccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHh----cCCchHHHHHHHHHHHHhcccccCeeEEEE
Confidence 58899999999999999999999999999999999988865 678999999999999999999999999999
Q ss_pred EeCCC
Q 023095 250 CFQSQ 254 (287)
Q Consensus 250 ~~~~~ 254 (287)
++...
T Consensus 770 ~l~~~ 774 (1081)
T KOG0618|consen 770 RLNHL 774 (1081)
T ss_pred Eeecc
Confidence 98754
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.70 E-value=1e-15 Score=151.84 Aligned_cols=175 Identities=19% Similarity=0.180 Sum_probs=124.8
Q ss_pred CCCeeEEEEEcCCCchHHHHHHHHHhHHHHhhc--CCChHHHHHHHHHHHHHHHHHHHHhccccccCCCcceeEEEEEe-
Q 023095 22 DEPSAFYGMFDGHGGKHAADFASCHLPRFITED--EEFPQEIERVVASAFLQTDSAFAEACSLDAALASGTTALAALVF- 98 (287)
Q Consensus 22 ~~~~~~~~V~DG~gG~~~~~~a~~~~~~~l~~~--~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~- 98 (287)
+++...++|+||+|+...|..++..+.+.+.+. ...+ ...++..+|..+..... ..+.+|+.+++++
T Consensus 577 ~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~------~~~ai~~lN~~L~~~~~----~~~faTl~l~~IDl 646 (764)
T TIGR02865 577 SAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFD------REVAIKTVNSILSLRST----DEKFSTLDLSVIDL 646 (764)
T ss_pred CCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCC------HHHHHHHHHHHHHhCCC----CCeEEEEEEEEEEC
Confidence 466788999999997777767776766665432 1122 15577777777654321 1368999888886
Q ss_pred -CCeEEEEEcccceeEEeecCeeEecCCCCCCCChhHHHHHHhcCCEeecCcccCcccchhhcCCccccCCCCCCCCCcc
Q 023095 99 -GRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKEKKRIEASGGYVYDGYLNGQLNVARALGDWHVEGMKGADGGPLS 177 (287)
Q Consensus 99 -~~~l~~a~vGDsr~y~~r~~~~~~lt~dhs~~~~~~~~r~~~~~~~i~~~~~~g~~~~~~a~g~~~~~~~~~~~g~~~~ 177 (287)
.+++.++++|+++.|+.|++++.+++..+.+ +|....
T Consensus 647 ~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP------------------------------------------lGil~~ 684 (764)
T TIGR02865 647 YTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP------------------------------------------IGILDE 684 (764)
T ss_pred CCCeEEEEecCCCceEEEECCEEEEecCCCce------------------------------------------eEeccC
Confidence 6899999999999999999988887654332 111123
Q ss_pred ccceEEEEEcCCCCeEEEEEcCcCcCccChhH-----HHHHHHHHHhcCCCHHHHHHHHHHHHHhcC---CCCCeEEEEE
Q 023095 178 AEPELMSTKLTEEDEFLIIACDGVWDVFMSQN-----AVDFARRRLQEHNDPVMCSKDLVDEALKRK---SGDNLAVVVV 249 (287)
Q Consensus 178 ~~p~~~~~~l~~gd~~lvL~SDGl~~~l~~~~-----i~~~i~~~~~~~~~~~~~a~~l~~~a~~~~---~~DN~T~ivi 249 (287)
.+++..+.++.+||.++ ++|||++|..++.+ +.+.+.. ....+|++.++.|++.+.... ..||+|++++
T Consensus 685 ~~~~~~~~~L~~GD~Ll-l~SDGv~E~~~~~~~~~~~l~~~l~~--~~~~~p~ela~~Il~~a~~~~~~~~~DD~Tvlvi 761 (764)
T TIGR02865 685 VDVELVRKKLKNGDLIV-MVSDGVLEGEKEVEGKVLWLVRKLKE--TNTNDPEEIAEYLLEKAKELRSGKIKDDMTVIVA 761 (764)
T ss_pred CccceEEEEeCCCCEEE-EECCCCCcCCcccccHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEE
Confidence 45667788999999655 99999999876533 3333322 134689999999999997643 4899999999
Q ss_pred Ee
Q 023095 250 CF 251 (287)
Q Consensus 250 ~~ 251 (287)
++
T Consensus 762 rv 763 (764)
T TIGR02865 762 KV 763 (764)
T ss_pred Ee
Confidence 76
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.62 E-value=8.2e-14 Score=116.38 Aligned_cols=176 Identities=18% Similarity=0.170 Sum_probs=115.3
Q ss_pred CCCeeEEEEEcCCCchHHHHHHHHHhHHHHhh---cCCChHHHHHHHHHHHHHHHHHHHHhccccccCCCcceeEEEEEe
Q 023095 22 DEPSAFYGMFDGHGGKHAADFASCHLPRFITE---DEEFPQEIERVVASAFLQTDSAFAEACSLDAALASGTTALAALVF 98 (287)
Q Consensus 22 ~~~~~~~~V~DG~gG~~~~~~a~~~~~~~l~~---~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~ 98 (287)
+++.++++|+|++|..-.|.+.+..+...+.. .... ..+.+..+|+.+....... ...+|++++.++
T Consensus 1 ~~~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~-------p~~~l~~ln~~l~~~~~~~---~~~~t~~~~~~d 70 (193)
T PF07228_consen 1 PDGRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD-------PEELLEALNRRLYRDLKGD---NRYATACYAIID 70 (193)
T ss_dssp TTTEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS-------HHHHHHHHHHHHHHHTTTT---STTEEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhhhc---cccceEEEEEec
Confidence 36788999999999555555555555544433 2222 3557777788775543322 256777777766
Q ss_pred --CCeEEEEEcccceeEEeec--CeeEecCCCCCCCChhHHHHHHhcCCEeecCcccCcccchhhcCCccccCCCCCCCC
Q 023095 99 --GRRLVVANVGDCRAVLCRR--GKAIEMSRDHKPVCSKEKKRIEASGGYVYDGYLNGQLNVARALGDWHVEGMKGADGG 174 (287)
Q Consensus 99 --~~~l~~a~vGDsr~y~~r~--~~~~~lt~dhs~~~~~~~~r~~~~~~~i~~~~~~g~~~~~~a~g~~~~~~~~~~~g~ 174 (287)
.+.++++++|+++++++++ +....+.....+ +|.
T Consensus 71 ~~~~~l~~~~aG~~~~l~~~~~~~~~~~~~~~~~~------------------------------lG~------------ 108 (193)
T PF07228_consen 71 PETGTLTYANAGHPPPLLLRPGGREIEQLESEGPP------------------------------LGI------------ 108 (193)
T ss_dssp TTTTEEEEEEESSSEEEEEETTCTEEEEETCSSBB------------------------------CSS------------
T ss_pred ccceEEEEeCCCCCCEEEEeccccceeecccCccc------------------------------eee------------
Confidence 5689999999999999998 344444332221 221
Q ss_pred CccccceEEEEEcCCCCeEEEEEcCcCcCccChhHH-------HHHHHHHHhcCCCHHHHHHHHHHHHHhc---CCCCCe
Q 023095 175 PLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNA-------VDFARRRLQEHNDPVMCSKDLVDEALKR---KSGDNL 244 (287)
Q Consensus 175 ~~~~~p~~~~~~l~~gd~~lvL~SDGl~~~l~~~~i-------~~~i~~~~~~~~~~~~~a~~l~~~a~~~---~~~DN~ 244 (287)
....++...++++.+||.++ |+|||+++....+.. .+++.+. ...++++.++.+.+.+... ...||+
T Consensus 109 ~~~~~~~~~~~~l~~gd~l~-l~TDGl~e~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~~~~~~~~~DD~ 185 (193)
T PF07228_consen 109 FEDIDYQEQEIQLEPGDRLL-LYTDGLFEALNEDGEFFGEERLLELLDEN--RGLSPQEIIDALLEAIDRFGKGPLRDDI 185 (193)
T ss_dssp SCTTCEEEEEEE--TTEEEE-EECHHHCTTTCHHCHHCCCHHHHHHHHCH--TTS-HHHHHHHHHHHHHHHTTSSTSS-E
T ss_pred eccccccceEEEeccccEEE-EeCCChhhccCCccchhHHHHHHHHHhhc--cCCCHHHHHHHHHHHHHHhcCCCCCCce
Confidence 12345667789999999766 999999999854432 3333221 4467899999999999763 579999
Q ss_pred EEEEEEeC
Q 023095 245 AVVVVCFQ 252 (287)
Q Consensus 245 T~ivi~~~ 252 (287)
|+++++++
T Consensus 186 tvl~~~~~ 193 (193)
T PF07228_consen 186 TVLVIRRQ 193 (193)
T ss_dssp EEEEEEE-
T ss_pred EEEEEEEC
Confidence 99999874
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.77 E-value=1.6e-06 Score=79.91 Aligned_cols=176 Identities=16% Similarity=0.108 Sum_probs=114.6
Q ss_pred CCeeEEEEEcCCC-chHHHHHHHHHhHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhccccccCCCcceeEEEEEe--
Q 023095 23 EPSAFYGMFDGHG-GKHAADFASCHLPRFITEDEEF-PQEIERVVASAFLQTDSAFAEACSLDAALASGTTALAALVF-- 98 (287)
Q Consensus 23 ~~~~~~~V~DG~g-G~~~~~~a~~~~~~~l~~~~~~-~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~-- 98 (287)
+....++|+|..| |..++-. +......+...... .-.+ ...++.+|+.+....... +-+|+...+++
T Consensus 173 ~~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~~~~p----~~~l~~~n~~~~~~~~~~----~f~T~~~~~~d~~ 243 (367)
T COG2208 173 EKRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESGPLDP----ADVLETLNRVLKQNLEED----MFVTLFLGVYDLD 243 (367)
T ss_pred CcEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhcccCCH----HHHHHHHHHHHHhcccCC----cEEEEEEEEEecc
Confidence 5788999999999 6666555 32222222221111 1112 345666666666553322 56777777776
Q ss_pred CCeEEEEEcccceeEEeecCee---EecCCCCCCCChhHHHHHHhcCCEeecCcccCcccchhhcCCccccCCCCCCCCC
Q 023095 99 GRRLVVANVGDCRAVLCRRGKA---IEMSRDHKPVCSKEKKRIEASGGYVYDGYLNGQLNVARALGDWHVEGMKGADGGP 175 (287)
Q Consensus 99 ~~~l~~a~vGDsr~y~~r~~~~---~~lt~dhs~~~~~~~~r~~~~~~~i~~~~~~g~~~~~~a~g~~~~~~~~~~~g~~ 175 (287)
.+.+.++++|---.++++.++. ..++..- .++ |..
T Consensus 244 ~~~l~y~~aGH~p~~i~~~~~~~~~~~l~~~g------------------------------~pi------------G~~ 281 (367)
T COG2208 244 SGELTYSNAGHEPALILSADGEIEVEDLTALG------------------------------LPI------------GLL 281 (367)
T ss_pred CCEEEEeeCCCCCeeEEEcCCCceeEEccCCC------------------------------cee------------eec
Confidence 6799999999999988886532 2222211 112 222
Q ss_pred ccccceEEEEEcCCCCeEEEEEcCcCcC-------ccChhHHHHHHHHHHhcCCCHHHHHHHHHHHHHhc----CCCCCe
Q 023095 176 LSAEPELMSTKLTEEDEFLIIACDGVWD-------VFMSQNAVDFARRRLQEHNDPVMCSKDLVDEALKR----KSGDNL 244 (287)
Q Consensus 176 ~~~~p~~~~~~l~~gd~~lvL~SDGl~~-------~l~~~~i~~~i~~~~~~~~~~~~~a~~l~~~a~~~----~~~DN~ 244 (287)
....+.+...++++||.++ +.|||+.+ .+..+...+.+.+ ....++++.++.+.+..... ...||+
T Consensus 282 ~~~~~~~~~~~l~~gd~lv-l~tDGv~Ea~~~~~~~~~~~~~~~~~~~--~~~~~~~e~~~~i~~~l~~~~~~~~~~DDi 358 (367)
T COG2208 282 PDYQYEVASLQLEPGDLLV-LYTDGVTEARNSDGEFFGLERLLKILGR--LLGQPAEEILEAILESLEELQGDQIQDDDI 358 (367)
T ss_pred CCccchheeEEecCCCEEE-EEcCCeeeeecCCccEecHHHHHHHHHH--HhCCCHHHHHHHHHHHHHHhhCCccccCce
Confidence 3455667788999988555 99999999 5666777776654 34567888888888887653 357889
Q ss_pred EEEEEEeC
Q 023095 245 AVVVVCFQ 252 (287)
Q Consensus 245 T~ivi~~~ 252 (287)
|++++++.
T Consensus 359 Tll~lk~~ 366 (367)
T COG2208 359 TLLVLKVK 366 (367)
T ss_pred EEEEEEec
Confidence 99999876
No 20
>cd01460 vWA_midasin VWA_Midasin: Midasin is a member of the AAA ATPase family. The proteins of this family are unified by their common archetectural organization that is based upon a conserved ATPase domain. The AAA domain of midasin contains six tandem AAA protomers. The AAA domains in midasin is followed by a D/E rich domain that is following by a VWA domain. The members of this subgroup have a conserved MIDAS motif. The function of this domain is not exactly known although it has been speculated to play a crucial role in midasin function.
Probab=54.00 E-value=57 Score=28.73 Aligned_cols=42 Identities=14% Similarity=0.261 Sum_probs=26.6
Q ss_pred CCeEEEEEEeCCC-CCCCCcCCCCccccccchHHHHHHHHHHhhhC
Q 023095 242 DNLAVVVVCFQSQ-PPPNLIAPRSRVQRSFSAEGLRELQSFLDSLG 286 (287)
Q Consensus 242 DN~T~ivi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (287)
.++.+++|-++.. ..++...++... +.-+... +|..|+++++
T Consensus 193 ~~i~l~~I~ld~~~~~~SI~d~~~~~-~~~~~~~--~l~~Yl~~fp 235 (266)
T cd01460 193 QNVFVVFIIIDNPDNKQSILDIKVVS-FKNDKSG--VITPYLDEFP 235 (266)
T ss_pred cCCeEEEEEEcCCCCCCCcccccccc-cCCCCcc--HHHHHHhcCC
Confidence 3689999999986 455555554322 2222222 8899998875
No 21
>PRK10693 response regulator of RpoS; Provisional
Probab=52.40 E-value=1.7e+02 Score=25.96 Aligned_cols=94 Identities=10% Similarity=0.048 Sum_probs=50.1
Q ss_pred CCCeeEEEEEcCCC--ch--HHHHHHHHHhHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhccccccCCCcceeEEEEE
Q 023095 22 DEPSAFYGMFDGHG--GK--HAADFASCHLPRFITEDEEFPQEIERVVASAFLQTDSAFAEACSLDAALASGTTALAALV 97 (287)
Q Consensus 22 ~~~~~~~~V~DG~g--G~--~~~~~a~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i 97 (287)
+++...|.++|=.| ++ .++-.+...+...+.................+..+|+.+...... ...|+.++++
T Consensus 160 ~~~~~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~~~~~~~~p~~~l~~lN~~l~~~~~~-----~~~t~~~~~~ 234 (303)
T PRK10693 160 SDNDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLP-----GQFPLLVGYY 234 (303)
T ss_pred CCCcEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHhcCCC-----ceeeEEEEEE
Confidence 45666777888554 33 333333222333443311000000001255677778877655211 1257777777
Q ss_pred e--CCeEEEEEcccceeEEeecCee
Q 023095 98 F--GRRLVVANVGDCRAVLCRRGKA 120 (287)
Q Consensus 98 ~--~~~l~~a~vGDsr~y~~r~~~~ 120 (287)
+ .+.+.+++.|-...++..++++
T Consensus 235 d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 235 HRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred EcCCCeEEEEeCCCCCEEecCCeEE
Confidence 6 5689999999999885434433
No 22
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=51.23 E-value=9.6 Score=26.37 Aligned_cols=18 Identities=22% Similarity=0.357 Sum_probs=14.2
Q ss_pred CCCeEEEEEcCcCcCccCh
Q 023095 189 EEDEFLIIACDGVWDVFMS 207 (287)
Q Consensus 189 ~gd~~lvL~SDGl~~~l~~ 207 (287)
+|.++| +++||+|=-+..
T Consensus 26 ~G~Rll-va~nGv~lEv~r 43 (72)
T PF09436_consen 26 PGHRLL-VASNGVFLEVRR 43 (72)
T ss_pred CCcEEE-EecCcEEEEEec
Confidence 788877 999999965443
No 23
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=51.21 E-value=11 Score=27.49 Aligned_cols=54 Identities=24% Similarity=0.332 Sum_probs=36.1
Q ss_pred EEcCCCCeEEEEEcCcCcCccChhHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCCCeEE
Q 023095 185 TKLTEEDEFLIIACDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKDLVDEALKRKSGDNLAV 246 (287)
Q Consensus 185 ~~l~~gd~~lvL~SDGl~~~l~~~~i~~~i~~~~~~~~~~~~~a~~l~~~a~~~~~~DN~T~ 246 (287)
.-++++|.++ |+.||++-.+...+..+-++. +| ..+-.+-+...+||-.+.++-
T Consensus 20 ~~l~~~D~vl-L~qdGV~aAl~~~~~~~sl~~------~p-~~~~alkeDl~ARGl~~~~s~ 73 (96)
T COG2168 20 RLLTEGDAVL-LLQDGVYAALKGNRYLASLRE------SP-IKVYALKEDLLARGLTGQISR 73 (96)
T ss_pred HHhcccCeEE-EEcccchhhhcCcHHHHHHhc------Cc-cceeeehhhHHhccchhhcCc
Confidence 3467889877 999999988887665554431 22 445556666777776665554
No 24
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=42.05 E-value=38 Score=27.99 Aligned_cols=48 Identities=21% Similarity=0.342 Sum_probs=33.9
Q ss_pred CeEEEEEcCcCcC-----------ccChhHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcC
Q 023095 191 DEFLIIACDGVWD-----------VFMSQNAVDFARRRLQEHNDPVMCSKDLVDEALKRK 239 (287)
Q Consensus 191 d~~lvL~SDGl~~-----------~l~~~~i~~~i~~~~~~~~~~~~~a~~l~~~a~~~~ 239 (287)
|.+| ..|.|||. +|.++.+=+.+..-+.+..=|.+.|..|+++-..+|
T Consensus 72 DTvL-FsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RG 130 (237)
T COG3700 72 DTVL-FSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred CeeE-ecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcC
Confidence 5445 88888884 555666666665544555568999999999877765
No 25
>COG1539 FolB Dihydroneopterin aldolase [Coenzyme metabolism]
Probab=40.11 E-value=1.7e+02 Score=22.42 Aligned_cols=64 Identities=14% Similarity=0.129 Sum_probs=50.9
Q ss_pred EEcCcCcCccChhHHHHHHHHHHhcC--CCHHHHHHHHHHHHHhcCCCCCeEEEEEEeCCCCCCCCcC
Q 023095 196 IACDGVWDVFMSQNAVDFARRRLQEH--NDPVMCSKDLVDEALKRKSGDNLAVVVVCFQSQPPPNLIA 261 (287)
Q Consensus 196 L~SDGl~~~l~~~~i~~~i~~~~~~~--~~~~~~a~~l~~~a~~~~~~DN~T~ivi~~~~~~~~~~~~ 261 (287)
..||=+-+.++-.++.+.+.++.+.. .-.+..|+.+.+..+.+- ..++.+-|.+.++.+|.+..
T Consensus 43 ~~~Ddl~dtl~Y~~v~~~i~~~v~~~~~~LiE~lA~~ia~~l~~~~--~~v~~~~v~v~KP~ap~~~~ 108 (121)
T COG1539 43 AESDDLADTLNYAEVSELIKEIVEGKRFALIETLAEEIADLLLARF--PRVELVEVKVTKPKAPIPAA 108 (121)
T ss_pred cCccchhheecHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHhhC--CccEEEEEEEECCCCCCCcC
Confidence 46788889999999999998877544 357778899998888754 78888889999888876643
No 26
>cd00534 DHNA_DHNTPE Dihydroneopterin aldolase (DHNA) and 7,8-dihydroneopterin triphosphate epimerase domain (DHNTPE); these enzymes have been designated folB and folX, respectively. Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is DHNA which catalyses the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate. Though it is known that DHNTPE catalyzes the epimerization of dihydroneopterin triphosphate to dihydromonapterin triphosphate, the biological role of this enzyme is still unclear. It is hypothesized that it is not an essential protein since a folX knockout in E. coli has a normal phenoty
Probab=38.96 E-value=1.6e+02 Score=21.95 Aligned_cols=60 Identities=10% Similarity=0.130 Sum_probs=45.5
Q ss_pred EEcCcCcCccChhHHHHHHHHHHhc--CCCHHHHHHHHHHHHHhcCCCCCeEEEEEEeCCCCCC
Q 023095 196 IACDGVWDVFMSQNAVDFARRRLQE--HNDPVMCSKDLVDEALKRKSGDNLAVVVVCFQSQPPP 257 (287)
Q Consensus 196 L~SDGl~~~l~~~~i~~~i~~~~~~--~~~~~~~a~~l~~~a~~~~~~DN~T~ivi~~~~~~~~ 257 (287)
-.||-+-+.++-..+.+.+.+...+ ....+..|..+.+..+.. .+.+.-+-+++.++.+|
T Consensus 42 ~~~D~l~~tidY~~l~~~i~~~~~~~~~~llE~La~~ia~~i~~~--~~~v~~v~v~v~K~~~~ 103 (118)
T cd00534 42 GESDDLADTLNYAEVAKLIKKIVEGSPFKLIETLAEEIADILLED--YPKVSAIKVKVEKPNAP 103 (118)
T ss_pred hccCChhhccCHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHh--CCCceEEEEEEECCCCC
Confidence 4678888888889999888876643 346788899999988775 35667777777777666
No 27
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=37.17 E-value=1.4e+02 Score=24.93 Aligned_cols=62 Identities=21% Similarity=0.311 Sum_probs=39.6
Q ss_pred CeEEEEEc-CcCcCccChhHHHHHHH-----------HHHhcCCCHHHHHHHH---HHHHHhcCCCCCeEEEEEEeC
Q 023095 191 DEFLIIAC-DGVWDVFMSQNAVDFAR-----------RRLQEHNDPVMCSKDL---VDEALKRKSGDNLAVVVVCFQ 252 (287)
Q Consensus 191 d~~lvL~S-DGl~~~l~~~~i~~~i~-----------~~~~~~~~~~~~a~~l---~~~a~~~~~~DN~T~ivi~~~ 252 (287)
|.++|+.| ||=|..++.+-...+.. .++.+.++|++.|..| ++....++..+++-+|=-.|-
T Consensus 2 Dt~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFG 78 (192)
T PF06057_consen 2 DTLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRARWGRKRVVLIGYSFG 78 (192)
T ss_pred CEEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCC
Confidence 45656666 99999887655544432 2455778899887554 444566777777755544444
No 28
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=32.76 E-value=86 Score=16.90 Aligned_cols=20 Identities=20% Similarity=0.268 Sum_probs=16.4
Q ss_pred EEeCCeEEEEEcccceeEEe
Q 023095 96 LVFGRRLVVANVGDCRAVLC 115 (287)
Q Consensus 96 ~i~~~~l~~a~vGDsr~y~~ 115 (287)
+-.++.+|++-.|+.|+.++
T Consensus 9 v~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EETTSEEEEEECCCTEEEEE
T ss_pred EeCCCCEEEEECCCCEEEEC
Confidence 33788999999999998764
No 29
>TIGR00525 folB dihydroneopterin aldolase. This model describes a bacterial dihydroneopterin aldolase, shown to form homo-octamers in E. coli. The equivalent activity is catalyzed by domains of larger folate biosynthesis proteins in other systems. The closely related parologous enzyme in E. coli, dihydroneopterin triphosphate epimerase, which is also homo-octameric, and dihydroneopterin aldolase domains of larger proteins, score below the trusted cutoff but may score well above the noise cutoff.
Probab=31.79 E-value=2e+02 Score=21.46 Aligned_cols=60 Identities=12% Similarity=0.052 Sum_probs=43.5
Q ss_pred EEcCcCcCccChhHHHHHHHHHHhcC--CCHHHHHHHHHHHHHhcCCCCCeEEEEEEeCCCCCC
Q 023095 196 IACDGVWDVFMSQNAVDFARRRLQEH--NDPVMCSKDLVDEALKRKSGDNLAVVVVCFQSQPPP 257 (287)
Q Consensus 196 L~SDGl~~~l~~~~i~~~i~~~~~~~--~~~~~~a~~l~~~a~~~~~~DN~T~ivi~~~~~~~~ 257 (287)
-.||.+-+.++-..+.+.+.+..++. ...+..|..+.+..+... ..+.-+-|++.++.+|
T Consensus 41 ~~~D~l~~tidY~~v~~~i~~~~~~~~~~llE~la~~Ia~~i~~~~--~~v~~v~v~i~Kp~ap 102 (116)
T TIGR00525 41 AESDDLGDTVNYAELYSAIEEIVAEKPRDLIETVAYRIADRLFADF--PQVQRVKVRVSKPNAP 102 (116)
T ss_pred hccCCchhccCHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHC--CCceEEEEEEEeCCCC
Confidence 45788888889999888888766532 467778899888887743 3456677777766654
No 30
>PRK15322 invasion protein OrgB; Provisional
Probab=28.48 E-value=2.6e+02 Score=23.58 Aligned_cols=52 Identities=19% Similarity=0.378 Sum_probs=37.8
Q ss_pred EEcCCCCeEEEEEcCcCcCccChhHHHHHHHHHHhcC-CCHHHHHHHHHHHHHh
Q 023095 185 TKLTEEDEFLIIACDGVWDVFMSQNAVDFARRRLQEH-NDPVMCSKDLVDEALK 237 (287)
Q Consensus 185 ~~l~~gd~~lvL~SDGl~~~l~~~~i~~~i~~~~~~~-~~~~~~a~~l~~~a~~ 237 (287)
+...++.+|| +||+-.--.|++++..+.....+... .+.+..|+.|-+.++.
T Consensus 142 i~yhd~~rFV-~~~g~qIaEFsPq~~v~~a~~~l~~~~d~~~~~~r~ls~~~l~ 194 (210)
T PRK15322 142 LKYHQEQRFI-MSCGDQIAEFSPEQFVETAVGVIKHHLDELPQDCRTISDNAIN 194 (210)
T ss_pred EEEcCCCceE-EEeCCchhccCHHHHHHHHHHHHHhCccchHHHHHHHhHHHHH
Confidence 4555677888 88887777889999888887766444 4477777777776653
No 31
>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2.7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents prokaryotic-type FAD synthetase, which occurs primarily as part of a bifunctional enzyme.; GO: 0003919 FMN adenylyltransferase activity, 0009231 riboflavin biosynthetic process; PDB: 2X0K_B 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A 1MRZ_A.
Probab=26.87 E-value=42 Score=26.92 Aligned_cols=51 Identities=25% Similarity=0.225 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhcCCCCCeEEEEEEeCCCCCCCCcCCCCccccccchHHHHHHHH
Q 023095 226 MCSKDLVDEALKRKSGDNLAVVVVCFQSQPPPNLIAPRSRVQRSFSAEGLRELQS 280 (287)
Q Consensus 226 ~~a~~l~~~a~~~~~~DN~T~ivi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (287)
...+.+.+.|.. .++..+|+.|++.|..-..+..........++.++.|+.
T Consensus 23 ~Li~~~~~~a~~----~~~~~~v~tF~~~P~~~~~~~~~~~~l~s~~ek~~~l~~ 73 (157)
T PF06574_consen 23 KLIKKAVEIAKE----KGLKSVVLTFDPHPKEVLNPDKPPKLLTSLEEKLELLES 73 (157)
T ss_dssp HHHHHHHHHHHH----CT-EEEEEEESS-CHHHHSCTCCGGBSS-HHHHHHHHHH
T ss_pred HHHHHHhhhhhh----cccceEEEEcccCHHHHhcCCCcccCCCCHHHHHHHHHH
Confidence 334445555544 789999999997664433323333334444455555444
No 32
>PRK11593 folB bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase; Provisional
Probab=26.77 E-value=2.8e+02 Score=20.81 Aligned_cols=60 Identities=10% Similarity=0.039 Sum_probs=45.3
Q ss_pred EEcCcCcCccChhHHHHHHHHHHhcC--CCHHHHHHHHHHHHHhcCCCCCeEEEEEEeCCCCCCC
Q 023095 196 IACDGVWDVFMSQNAVDFARRRLQEH--NDPVMCSKDLVDEALKRKSGDNLAVVVVCFQSQPPPN 258 (287)
Q Consensus 196 L~SDGl~~~l~~~~i~~~i~~~~~~~--~~~~~~a~~l~~~a~~~~~~DN~T~ivi~~~~~~~~~ 258 (287)
-.||-+-+.++-..+.+.+.+..++. ...+..|+.+.+..+..-. +.-+-+.+.++.+|.
T Consensus 42 ~~~Ddl~~tidY~~v~~~I~~~~~~~~~~LlE~la~~ia~~i~~~~~---~~~v~v~v~Kp~a~~ 103 (119)
T PRK11593 42 AKSDDVADCLSYADIAETVISHVEGARFALVERVAEEVAELLLARFN---SPWVRIKLSKPGAVA 103 (119)
T ss_pred ccccCHhhccCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHhhCC---CcEEEEEEECCCCCC
Confidence 45788888999999999988876533 4688899999998887642 355667777776664
No 33
>COG3484 Predicted proteasome-type protease [Posttranslational modification, protein turnover, chaperones]
Probab=25.50 E-value=98 Score=26.03 Aligned_cols=30 Identities=20% Similarity=0.449 Sum_probs=23.0
Q ss_pred CCCCeEEEEEcCcCcCccChhHHHHHHHHHHh
Q 023095 188 TEEDEFLIIACDGVWDVFMSQNAVDFARRRLQ 219 (287)
Q Consensus 188 ~~gd~~lvL~SDGl~~~l~~~~i~~~i~~~~~ 219 (287)
.+||+++||||-| +.-..+.+.+++.+.++
T Consensus 39 ~pGdRvlvl~taG--NLA~tQaV~~ll~e~~~ 68 (255)
T COG3484 39 LPGDRVLVLCTAG--NLAITQAVLHLLDERIQ 68 (255)
T ss_pred CCCceEEEEEecC--ccHHHHHHHHHHHHHhh
Confidence 4899999999999 44466777777776553
No 34
>PRK11245 folX D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase; Provisional
Probab=21.92 E-value=3.5e+02 Score=20.32 Aligned_cols=60 Identities=10% Similarity=0.020 Sum_probs=45.4
Q ss_pred EEcCcCcCccChhHHHHHHHHHHhc--CCCHHHHHHHHHHHHHhcCCCCCeEEEEEEeCCCCCCC
Q 023095 196 IACDGVWDVFMSQNAVDFARRRLQE--HNDPVMCSKDLVDEALKRKSGDNLAVVVVCFQSQPPPN 258 (287)
Q Consensus 196 L~SDGl~~~l~~~~i~~~i~~~~~~--~~~~~~~a~~l~~~a~~~~~~DN~T~ivi~~~~~~~~~ 258 (287)
-.||=+-+.++-..+.+.+.+...+ ....+..|+.+.+..+. ...+.-+-+++.++.++.
T Consensus 46 ~~sDdl~~tidY~~v~~~i~~~v~~~~~~llE~la~~Ia~~i~~---~~~v~~v~v~v~Kp~a~~ 107 (120)
T PRK11245 46 RTSDDIDDALNYRTITKNIIQHVENNRFSLLEKLTQDVLDIARE---HPWVTYAEVEIDKPHALR 107 (120)
T ss_pred ccccCHHHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHc---cCCccEEEEEEECCCCCC
Confidence 4678888888889999988876643 34678889999987665 256777888888877664
No 35
>PHA02754 hypothetical protein; Provisional
Probab=21.90 E-value=67 Score=21.12 Aligned_cols=18 Identities=22% Similarity=0.370 Sum_probs=14.0
Q ss_pred CCCCeEEEEEcCcCcCcc
Q 023095 188 TEEDEFLIIACDGVWDVF 205 (287)
Q Consensus 188 ~~gd~~lvL~SDGl~~~l 205 (287)
..||.++|+.+||+-=.+
T Consensus 42 ~SGdkIVVi~aD~I~i~l 59 (67)
T PHA02754 42 TSGDKIVVITADAIKIEL 59 (67)
T ss_pred ecCCEEEEEEcceEEEEE
Confidence 478999999999985333
No 36
>PF04155 Ground-like: Ground-like domain; InterPro: IPR007284 This group of proteins contain one or more copies of the ground-like domain, which are specific to Caenorhabditis elegans and Caenorhabditis briggsae. It has been proposed that the ground-like domain containing proteins may bind and modulate the activity of Patched-like membrane molecules, reminiscent of the modulating activities of neuropeptides [].
Probab=21.08 E-value=2.8e+02 Score=18.93 Aligned_cols=42 Identities=17% Similarity=0.259 Sum_probs=28.0
Q ss_pred ChhHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCCCeEEEEE
Q 023095 206 MSQNAVDFARRRLQEHNDPVMCSKDLVDEALKRKSGDNLAVVVV 249 (287)
Q Consensus 206 ~~~~i~~~i~~~~~~~~~~~~~a~~l~~~a~~~~~~DN~T~ivi 249 (287)
.++++.++|.+.+.. .++...++.|...+...-+. ++.+|+-
T Consensus 7 n~~~L~~ii~~~~~~-~~~~~s~~~Iq~~~e~~f~~-~f~vIcs 48 (76)
T PF04155_consen 7 NSEELRKIILKNMKE-CNLSISKRAIQKAAEKRFGG-SFEVICS 48 (76)
T ss_pred CCHHHHHHHHHHhcc-CCHHHHHHHHHHHHHHHhCC-CEEEEEe
Confidence 456788888775533 67888888887777654433 6666654
Done!