BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023099
MPVYVDREAPKLWRKICSETTIEISLLAENWKIILGGIIFQYIHGLAAHAVHYLHQPGPL
LQDSGYALIPELGEDKAYISETLFSFLFFSFVLWTFHPFVFQSKSFHTVLLWCRVLACLV
VCQMLRIVTFYSTQLPGPNYHCREGSKLARLPRPESVVEVLLINFPRGMIYGCGDLIFSS
HMIFTLLFVLTYHKYGTIRFIKQSAWLLAIIESLLIIASRKHYTVDVVVAWYTVNLVVFF
INKKLPELPDRSNASASLQFLPVSSRDKDGRNKDELHRSNNGTSGHI

High Scoring Gene Products

Symbol, full name Information P value
AtIPCS1
Arabidopsis Inositol phosphorylceramide synthase 1
protein from Arabidopsis thaliana 1.3e-98
AtIPCS3
Arabidopsis Inositol phosphorylceramide synthase 3
protein from Arabidopsis thaliana 2.0e-95
AtIPCS2
Arabidopsis Inositol phosphorylceramide synthase 2
protein from Arabidopsis thaliana 1.0e-91
zgc:175139 gene_product from Danio rerio 7.3e-06
zgc:162183 gene_product from Danio rerio 1.6e-05
SAMD8
Uncharacterized protein
protein from Gallus gallus 4.9e-05
SAMD8
Sphingomyelin synthase-related protein 1
protein from Homo sapiens 0.00030
SAMD8
Uncharacterized protein
protein from Bos taurus 0.00031
SAMD8
Uncharacterized protein
protein from Sus scrofa 0.00038
Samd8
sterile alpha motif domain containing 8
protein from Mus musculus 0.00049
Samd8
sterile alpha motif domain containing 8
gene from Rattus norvegicus 0.00064
sms-3 gene from Caenorhabditis elegans 0.00080
sms-3
Putative phosphatidylcholine:ceramide cholinephosphotransferase 3
protein from Caenorhabditis elegans 0.00080

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023099
        (287 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2084455 - symbol:AtIPCS1 "Arabidopsis Inositol...   979  1.3e-98   1
TAIR|locus:504956063 - symbol:AtIPCS3 "Arabidopsis Inosit...   949  2.0e-95   1
TAIR|locus:2065629 - symbol:AtIPCS2 "Arabidopsis Inositol...   914  1.0e-91   1
ZFIN|ZDB-GENE-080219-27 - symbol:zgc:175139 "zgc:175139" ...   130  7.3e-06   1
ZFIN|ZDB-GENE-070410-30 - symbol:zgc:162183 "zgc:162183" ...   127  1.6e-05   1
UNIPROTKB|F1NI82 - symbol:SAMD8 "Uncharacterized protein"...   123  4.9e-05   1
UNIPROTKB|Q96LT4 - symbol:SAMD8 "Sphingomyelin synthase-r...   116  0.00030   1
UNIPROTKB|F1MYS1 - symbol:SAMD8 "Uncharacterized protein"...   116  0.00031   1
UNIPROTKB|F1S2F8 - symbol:SAMD8 "Uncharacterized protein"...   116  0.00038   1
MGI|MGI:1914880 - symbol:Samd8 "sterile alpha motif domai...   115  0.00049   1
RGD|1306447 - symbol:Samd8 "sterile alpha motif domain co...   114  0.00064   1
WB|WBGene00004894 - symbol:sms-3 species:6239 "Caenorhabd...   111  0.00080   1
UNIPROTKB|Q965Q4 - symbol:sms-3 "Putative phosphatidylcho...   111  0.00080   1


>TAIR|locus:2084455 [details] [associations]
            symbol:AtIPCS1 "Arabidopsis Inositol phosphorylceramide
            synthase 1" species:3702 "Arabidopsis thaliana" [GO:0005886 "plasma
            membrane" evidence=ISM] [GO:0030148 "sphingolipid biosynthetic
            process" evidence=IDA] [GO:0045140 "inositol phosphoceramide
            synthase activity" evidence=IMP;IDA] GO:GO:0016021 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AL132960 GO:GO:0030148 GO:GO:0045140
            EMBL:AY048287 EMBL:AY139802 IPI:IPI00540672 IPI:IPI00543730
            PIR:T45942 RefSeq:NP_190970.1 UniGene:At.1413 IntAct:Q9M325
            EnsemblPlants:AT3G54020.1 GeneID:824569 KEGG:ath:AT3G54020
            TAIR:At3g54020 eggNOG:NOG259509 HOGENOM:HOG000005733
            InParanoid:Q9M325 OMA:CASQFLR PhylomeDB:Q9M325
            ProtClustDB:CLSN2685069 Genevestigator:Q9M325 InterPro:IPR025749
            Pfam:PF14360 Uniprot:Q9M325
        Length = 305

 Score = 979 (349.7 bits), Expect = 1.3e-98, P = 1.3e-98
 Identities = 183/282 (64%), Positives = 215/282 (76%)

Query:     1 MPVYVDREAPKLWRKICSETTIEISLLAENWKIILGGIIFQYIHGLAAHAVHYLHQPGPL 60
             M +Y+ REA KLWR+ CSE T EI LLAENWK +L G++ QYIHGLAA  VHY+H+PGP 
Sbjct:     1 MTLYIRREASKLWRRFCSEITTEIGLLAENWKYLLAGLLCQYIHGLAARGVHYIHRPGPT 60

Query:    61 LQDSGYALIPELGEDKAYISETXXXXXXXXXVLWTFHPFVFQSKSFHTVLLWCRVLACLV 120
             LQDSG+ ++PELG+DK +ISET          LWTFHPF+ +SK  +TVL+WCRVLA LV
Sbjct:    61 LQDSGFFVLPELGQDKGFISETVFTCVFLSFFLWTFHPFIVKSKKIYTVLIWCRVLAFLV 120

Query:   121 VCQMLRIVTFYSTQLPGPNYHCREGSKLARLPRPESVVEVLLINFPRGMIYGCGDLIFSS 180
              CQ LR++TFYSTQLPGPNYHCREGS+LARLPRP +V+EVLL+NFPRG+IYGCGDLIFSS
Sbjct:   121 ACQFLRVITFYSTQLPGPNYHCREGSELARLPRPHNVLEVLLLNFPRGVIYGCGDLIFSS 180

Query:   181 HMIFTLLFVLTYHKYGTIRFIKQXXXXXXXXXXXXXXXXRKHYTVDVVVAWYTVNLVVFF 240
             HMIFTL+FV TY KYG+ RFIK                 RKHYTVDVVVAWYTVNLVVFF
Sbjct:   181 HMIFTLVFVRTYQKYGSKRFIKLLGWVIAILQSLLIIASRKHYTVDVVVAWYTVNLVVFF 240

Query:   241 INKKLPELPDRSNASASLQFLPVSSRDKDGRNKDELHRSNNG 282
             ++KKLPELPDR+ A      LPV S+D   R K+E H+  NG
Sbjct:   241 LDKKLPELPDRTTA-----LLPVISKD---RTKEESHKLLNG 274


>TAIR|locus:504956063 [details] [associations]
            symbol:AtIPCS3 "Arabidopsis Inositol phosphorylceramide
            synthase 3" species:3702 "Arabidopsis thaliana" [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0030148 "sphingolipid
            biosynthetic process" evidence=IDA] [GO:0045140 "inositol
            phosphoceramide synthase activity" evidence=IMP;IDA] GO:GO:0016021
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030148 GO:GO:0045140
            EMBL:AC004561 eggNOG:NOG259509 HOGENOM:HOG000005733
            ProtClustDB:CLSN2685069 InterPro:IPR025749 Pfam:PF14360
            EMBL:AY231431 EMBL:BX820662 EMBL:AK221522 IPI:IPI00539390
            IPI:IPI00548168 IPI:IPI00570380 RefSeq:NP_001189633.1
            RefSeq:NP_850134.2 RefSeq:NP_973560.1 UniGene:At.11436
            UniGene:At.66368 EnsemblPlants:AT2G29525.1
            EnsemblPlants:AT2G29525.3 GeneID:817501 KEGG:ath:AT2G29525
            TAIR:At2g29525 InParanoid:Q56Y01 OMA:RHDEDIN PhylomeDB:Q56Y01
            Genevestigator:Q56Y01 Uniprot:Q56Y01
        Length = 289

 Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
 Identities = 171/289 (59%), Positives = 214/289 (74%)

Query:     1 MPVYVDREAPKLWRKICSETTIEISLLAENWKIILGGIIFQYIHGLAAHAVHYLHQPGPL 60
             MPVYVDREAPKLWR+I SE T+E SLLAE WK++L G++FQYIHGLAAH VHYLH+PGP 
Sbjct:     1 MPVYVDREAPKLWRRIYSEATLEASLLAEKWKLVLAGLVFQYIHGLAAHGVHYLHRPGPT 60

Query:    61 LQDSGYALIPELGEDKAYISETXXXXXXXXXVLWTFHPFVFQSKSFHTVLLWCRVLACLV 120
             LQD+G+ ++P LG+DKA+ SET         +LWTFHPFV  SK   TVL+WCRV   L 
Sbjct:    61 LQDAGFFILPALGQDKAFFSETVFVTIFGSFILWTFHPFVSHSKKICTVLIWCRVFVYLA 120

Query:   121 VCQMLRIVTFYSTQLPGPNYHCREGSKLARLPRPESVVEVLLINFPRGMIYGCGDLIFSS 180
               Q LRI+TF++TQLPGPNYHCREGSKLA++P P++V+EVLLINFP G+IYGCGDLIFSS
Sbjct:   121 ASQSLRIITFFATQLPGPNYHCREGSKLAKIPPPKNVLEVLLINFPDGVIYGCGDLIFSS 180

Query:   181 HMIFTLLFVLTYHKYGTIRFIKQXXXXXXXXXXXXXXXXRKHYTVDVVVAWYTVNLVVFF 240
             H IFTL+FV TY +YGT R+IK                 RKHYTVD+VVAWYTVNLV+F+
Sbjct:   181 HTIFTLVFVRTYQRYGTRRWIKHLAWLMAVIQSILIIASRKHYTVDIVVAWYTVNLVMFY 240

Query:   241 INKKLPELPDRSNASASLQFLPVSSRDKDGRNKDELHR---SNNGTSGH 286
             ++ KLPE+ +RS+  +    LP+S++D   ++K++  R    NN    H
Sbjct:   241 VDSKLPEMAERSSGPSPTPLLPLSTKDSKNKSKEDHQRLLNENNVADDH 289


>TAIR|locus:2065629 [details] [associations]
            symbol:AtIPCS2 "Arabidopsis Inositol phosphorylceramide
            synthase 2" species:3702 "Arabidopsis thaliana" [GO:0005886 "plasma
            membrane" evidence=ISM] [GO:0005802 "trans-Golgi network"
            evidence=IDA] [GO:0030148 "sphingolipid biosynthetic process"
            evidence=IDA] [GO:0045140 "inositol phosphoceramide synthase
            activity" evidence=IMP;IDA] [GO:0006612 "protein targeting to
            membrane" evidence=RCA] [GO:0006944 "cellular membrane fusion"
            evidence=RCA] [GO:0009723 "response to ethylene stimulus"
            evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
            [GO:0010363 "regulation of plant-type hypersensitive response"
            evidence=RCA] [GO:0043069 "negative regulation of programmed cell
            death" evidence=RCA] [GO:0050832 "defense response to fungus"
            evidence=RCA] GO:GO:0016021 GO:GO:0005794 EMBL:CP002685
            GO:GO:0006952 GO:GO:0005802 GO:GO:0030148 GO:GO:0045140
            eggNOG:NOG259509 HOGENOM:HOG000005733 ProtClustDB:CLSN2685069
            InterPro:IPR025749 Pfam:PF14360 EMBL:AF325083 EMBL:AY058059
            EMBL:AY090297 EMBL:AK317636 IPI:IPI00547009 PIR:A84799
            RefSeq:NP_565875.1 UniGene:At.14635 STRING:Q9SH93
            EnsemblPlants:AT2G37940.1 GeneID:818371 KEGG:ath:AT2G37940
            TAIR:At2g37940 InParanoid:Q9SH93 OMA:TKEENHK PhylomeDB:Q9SH93
            BioCyc:ARA:AT2G37940-MONOMER BioCyc:MetaCyc:AT2G37940-MONOMER
            Genevestigator:Q9SH93 Uniprot:Q9SH93
        Length = 305

 Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
 Identities = 174/282 (61%), Positives = 211/282 (74%)

Query:     1 MPVYVDREAPKLWRKICSETTIEISLLAENWKIILGGIIFQYIHGLAAHAVHYLHQPGPL 60
             M +Y+ RE+ KLW++ CSE + EI LLAENWK +L G+I QYIHGLAA  VHY+H+PGP 
Sbjct:     1 MTLYIRRESSKLWKRFCSEISTEIGLLAENWKYLLAGLICQYIHGLAAKGVHYIHRPGPT 60

Query:    61 LQDSGYALIPELGEDKAYISETXXXXXXXXXVLWTFHPFVFQSKSFHTVLLWCRVLACLV 120
             LQD G+ L+PELG++++YISET          LWTFHPF+ ++K  +TVL+WCRVLA LV
Sbjct:    61 LQDLGFFLLPELGQERSYISETVFTSVFLSFFLWTFHPFILKTKKIYTVLIWCRVLAFLV 120

Query:   121 VCQMLRIVTFYSTQLPGPNYHCREGSKLARLPRPESVVEVLLINFPRGMIYGCGDLIFSS 180
              CQ LR++TFYSTQLPGPNYHCREGSK++RLP P+S +EVL IN P G++YGCGDLIFSS
Sbjct:   121 ACQFLRVITFYSTQLPGPNYHCREGSKVSRLPWPKSALEVLEIN-PHGVMYGCGDLIFSS 179

Query:   181 HMIFTLLFVLTYHKYGTIRFIKQXXXXXXXXXXXXXXXXRKHYTVDVVVAWYTVNLVVFF 240
             HMIFTL+FV TY KYGT RFIK                 RKHY+VDVVVAWYTVNLVVF 
Sbjct:   180 HMIFTLVFVRTYQKYGTKRFIKLFGWLTAIVQSLLIIASRKHYSVDVVVAWYTVNLVVFC 239

Query:   241 INKKLPELPDRSNASASLQFLPVSSRDKDGRNKDELHRSNNG 282
             ++KKLPELPDR+   A L  LPV S+D   R K+E H+  NG
Sbjct:   240 LDKKLPELPDRT---AVL--LPVISKD---RTKEENHKLLNG 273


>ZFIN|ZDB-GENE-080219-27 [details] [associations]
            symbol:zgc:175139 "zgc:175139" species:7955 "Danio
            rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] InterPro:IPR001660 PROSITE:PS50105 SMART:SM00454
            ZFIN:ZDB-GENE-080219-27 Gene3D:1.10.150.50 InterPro:IPR013761
            InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769 InterPro:IPR025749
            Pfam:PF14360 HOVERGEN:HBG048216 EMBL:BC158202 IPI:IPI00801342
            RefSeq:NP_001108374.1 UniGene:Dr.120982 ProteinModelPortal:B0BLX7
            GeneID:100141337 KEGG:dre:100141337 NextBio:20791352 Uniprot:B0BLX7
        Length = 409

 Score = 130 (50.8 bits), Expect = 7.3e-06, P = 7.3e-06
 Identities = 50/221 (22%), Positives = 92/221 (41%)

Query:    29 ENWKIILGGIIFQYIHGLAAHAVHYLHQPGPLLQDSGYALIPELGEDKA-YISETXXXXX 87
             E WK +L  +   ++ G  +  +  +H+  P ++   Y  +P++  D    I        
Sbjct:   142 EVWKTVLSSVYVAFVFGFTSFVMVIVHERVPDMRT--YPPLPDIFLDSVPRIPWAFAMAE 199

Query:    88 XXXXVLWTFHPFVFQSKSFHTVLLWCRVLACLVVCQMLRIVTFYSTQL--PGPNYHCRE- 144
                 +L      V       ++LL  R+ + +    MLR +T + T L  PG +  C   
Sbjct:   200 ACGVILCCIWLLVLLLHKHRSILLR-RLCSLMGTVFMLRCITMFVTSLSVPGQHLQCTGK 258

Query:   145 --GSKLARLPRPESVVEVLLINFPRGMIYGCGDLIFSSH-MIFTLL-FVLTYHKYGTIRF 200
               G   A+L R  ++     +    G +  CGD +FS H ++ T+L F +T +   +  F
Sbjct:   259 IYGDVWAKLQRAVAIWSGFGMTLT-G-VQTCGDYMFSGHTVVLTMLNFFVTEYTPRSWNF 316

Query:   201 IKQXXXXXXXXXXXXXXXXRKHYTVDVVVAWY-TVNLVVFF 240
             I                   +HY++DV +A+Y T  L +++
Sbjct:   317 IHTLSWVLNLFGIFFILAAHEHYSIDVFIAFYITTRLFLYY 357


>ZFIN|ZDB-GENE-070410-30 [details] [associations]
            symbol:zgc:162183 "zgc:162183" species:7955 "Danio
            rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] InterPro:IPR001660 PROSITE:PS50105 SMART:SM00454
            ZFIN:ZDB-GENE-070410-30 Gene3D:1.10.150.50 InterPro:IPR013761
            InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769 InterPro:IPR025749
            Pfam:PF14360 eggNOG:NOG306737 HOGENOM:HOG000233822
            HOVERGEN:HBG048216 GeneTree:ENSGT00390000001630 OrthoDB:EOG498V0S
            EMBL:CU928227 EMBL:BC139536 IPI:IPI00803136 RefSeq:NP_001082939.1
            UniGene:Dr.86797 Ensembl:ENSDART00000113936 GeneID:100037314
            KEGG:dre:100037314 NextBio:20788492 Uniprot:A4QNV5
        Length = 412

 Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 48/219 (21%), Positives = 90/219 (41%)

Query:    29 ENWKIILGGIIFQYIHGLAAHAVHYLHQPGPLLQDSGYALIPELGEDKA-YISETXXXXX 87
             E WK  LG +    + G+ +  +  +H+  P ++   Y  +P++  D    I        
Sbjct:   145 EYWKTALGALYAMMVCGVTSFVMVLVHERVPDMRT--YPPLPDIFLDSVPRIPWAFAMAE 202

Query:    88 XXXXVLWTFHPFVFQSKSFHTVLLWCRVLACLVVCQMLRIVTFYSTQLPGPNYHCREGSK 147
                 VL +    V      H  +L+ R+        +LR VT + T L  P +H +   K
Sbjct:   203 ACAVVLGSMLMLVLLMHR-HRSILFRRLCNLTGTVFLLRCVTMFVTSLSVPGHHLQCSGK 261

Query:   148 LA--RLPRPESVVEVLL-INFPRGMIYGCGDLIFSSH-MIFTLL-FVLTYHKYGTIRFIK 202
             +      + +  +E+   +      ++ CGD +FS H ++ T+L F +T +      FI 
Sbjct:   262 IYGDAWTKVQRALEIWSGLGMSLTGVHTCGDYMFSGHTVVLTMLNFFVTEYTPRNWNFIH 321

Query:   203 QXXXXXXXXXXXXXXXXRKHYTVDVVVAWY-TVNLVVFF 240
                               +HY++DV +A+Y T  L +++
Sbjct:   322 TMSWVLNLFGIFFILAAHEHYSIDVFIAFYITTRLFLYY 360


>UNIPROTKB|F1NI82 [details] [associations]
            symbol:SAMD8 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0030176 "integral to endoplasmic reticulum membrane"
            evidence=IEA] [GO:0046513 "ceramide biosynthetic process"
            evidence=IEA] [GO:2000303 "regulation of ceramide biosynthetic
            process" evidence=IEA] InterPro:IPR001660 PROSITE:PS50105
            SMART:SM00454 Gene3D:1.10.150.50 InterPro:IPR013761
            InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769 InterPro:IPR025749
            Pfam:PF14360 GeneTree:ENSGT00390000001630 OMA:CNGEPSH
            EMBL:AADN02027875 IPI:IPI00586234 Ensembl:ENSGALT00000008013
            Uniprot:F1NI82
        Length = 417

 Score = 123 (48.4 bits), Expect = 4.9e-05, P = 4.9e-05
 Identities = 48/220 (21%), Positives = 92/220 (41%)

Query:    29 ENWKIILGGIIFQYIHGLAAHAVHYLHQPGPLLQDSGYALIPELGEDKAYISETXXXXXX 88
             E WK +L  +    + G  +  +  +H+  P +Q   Y  +P++  D             
Sbjct:   150 EYWKTVLSCVYVFIVFGFTSFVMVIVHERVPDMQT--YPPLPDIFLDSVPRIPWAFAMTE 207

Query:    89 XXXVLWTFHPFVFQSKSFHTVLLWCRVLACLVVCQMLRIVTFYSTQL--PGPNYHCRE-- 144
                V+  +   +      H  +L  R+ + +    +LR VT + T L  PG +  C    
Sbjct:   208 VCGVILCYIWLLVLLLHKHRSILLRRLCSLMGTVFLLRCVTMFVTSLSVPGQHLQCTGKL 267

Query:   145 -GSKLARLPRPESVVEVLLINFPRGMIYGCGDLIFSSH-MIFTLL-FVLTYHKYGTIRFI 201
              G+  A+L R  ++     +    G ++ CGD +FS H ++ T+L F +T +   +  F+
Sbjct:   268 YGNVWAKLQRAFAIWSGFGMTLT-G-VHTCGDYMFSGHTVVLTMLNFFVTEYTPRSWNFL 325

Query:   202 KQXXXXXXXXXXXXXXXXRKHYTVDVVVAWY-TVNLVVFF 240
                                +HY++DV +A+Y T  L +++
Sbjct:   326 HTLSWVLNLFGIFFILAAHEHYSIDVFIAFYITTRLFLYY 365


>UNIPROTKB|Q96LT4 [details] [associations]
            symbol:SAMD8 "Sphingomyelin synthase-related protein 1"
            species:9606 "Homo sapiens" [GO:0016740 "transferase activity"
            evidence=IEA] [GO:0006686 "sphingomyelin biosynthetic process"
            evidence=NAS] [GO:0003674 "molecular_function" evidence=ND]
            [GO:0016021 "integral to membrane" evidence=NAS] [GO:0046513
            "ceramide biosynthetic process" evidence=IDA] [GO:2000303
            "regulation of ceramide biosynthetic process" evidence=IDA]
            [GO:0030176 "integral to endoplasmic reticulum membrane"
            evidence=IDA] InterPro:IPR001660 PROSITE:PS50105 SMART:SM00454
            GO:GO:0016740 EMBL:CH471083 GO:GO:0030176 Gene3D:1.10.150.50
            InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
            EMBL:AL392111 InterPro:IPR025749 Pfam:PF14360 EMBL:AK057811
            EMBL:BC080593 EMBL:BX280496 IPI:IPI00165639 IPI:IPI00550225
            RefSeq:NP_001167627.1 RefSeq:NP_653261.1 UniGene:Hs.727615
            ProteinModelPortal:Q96LT4 SMR:Q96LT4 IntAct:Q96LT4 STRING:Q96LT4
            PhosphoSite:Q96LT4 DMDM:44888529 PaxDb:Q96LT4 PRIDE:Q96LT4
            DNASU:142891 Ensembl:ENST00000372687 Ensembl:ENST00000372690
            Ensembl:ENST00000542569 GeneID:142891 KEGG:hsa:142891
            UCSC:uc001jwx.2 UCSC:uc001jwy.2 CTD:142891 GeneCards:GC10P076859
            HGNC:HGNC:26320 HPA:HPA044402 MIM:611575 neXtProt:NX_Q96LT4
            PharmGKB:PA134868247 eggNOG:NOG306737 HOGENOM:HOG000233822
            HOVERGEN:HBG048216 InParanoid:Q96LT4 PhylomeDB:Q96LT4
            GenomeRNAi:142891 NextBio:84629 ArrayExpress:Q96LT4 Bgee:Q96LT4
            CleanEx:HS_SAMD8 Genevestigator:Q96LT4 GermOnline:ENSG00000156671
            GO:GO:2000303 GO:GO:0006686 Uniprot:Q96LT4
        Length = 415

 Score = 116 (45.9 bits), Expect = 0.00030, P = 0.00030
 Identities = 51/221 (23%), Positives = 91/221 (41%)

Query:    29 ENWKIILGGIIFQYIHGLAAHAVHYLHQPGPLLQDSGYALIPELGEDKA-YISETXXXXX 87
             E WK IL  I    + G  +  +  +H+  P +Q   Y  +P++  D    I        
Sbjct:   148 EYWKTILSCIYVFIVFGFTSFIMVIVHERVPDMQT--YPPLPDIFLDSVPRIPWAFAMTE 205

Query:    88 XXXXVLWTFHPFVFQSKSFHTVLLWCRVLACLVVCQMLRIVTFYSTQL--PGPNYHCRE- 144
                 +L      V       ++LL  R+ + +    +LR  T + T L  PG +  C   
Sbjct:   206 VCGMILCYIWLLVLLLHKHRSILLR-RLCSLMGTVFLLRCFTMFVTSLSVPGQHLQCTGK 264

Query:   145 --GSKLARLPRPESVVEVLLINFPRGMIYGCGDLIFSSH-MIFTLL-FVLTYHKYGTIRF 200
               GS   +L R  ++     +    G ++ CGD +FS H ++ T+L F +T +   +  F
Sbjct:   265 IYGSVWEKLHRAFAIWSGFGMTLT-G-VHTCGDYMFSGHTVVLTMLNFFVTEYTPRSWNF 322

Query:   201 IKQXXXXXXXXXXXXXXXXRKHYTVDVVVAWY-TVNLVVFF 240
             +                   +HY++DV +A+Y T  L +++
Sbjct:   323 LHTLSWVLNLFGIFFILAAHEHYSIDVFIAFYITTRLFLYY 363


>UNIPROTKB|F1MYS1 [details] [associations]
            symbol:SAMD8 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2000303 "regulation of ceramide biosynthetic process"
            evidence=IEA] [GO:0046513 "ceramide biosynthetic process"
            evidence=IEA] [GO:0030176 "integral to endoplasmic reticulum
            membrane" evidence=IEA] InterPro:IPR001660 PROSITE:PS50105
            SMART:SM00454 Gene3D:1.10.150.50 InterPro:IPR013761
            InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769 InterPro:IPR025749
            Pfam:PF14360 GeneTree:ENSGT00390000001630 OMA:CNGEPSH
            EMBL:DAAA02061918 IPI:IPI00707996 Ensembl:ENSBTAT00000011368
            Uniprot:F1MYS1
        Length = 421

 Score = 116 (45.9 bits), Expect = 0.00031, P = 0.00031
 Identities = 51/221 (23%), Positives = 91/221 (41%)

Query:    29 ENWKIILGGIIFQYIHGLAAHAVHYLHQPGPLLQDSGYALIPELGEDKA-YISETXXXXX 87
             E WK IL  I    + G  +  +  +H+  P +Q   Y  +P++  D    I        
Sbjct:   154 EYWKTILSCIYVFIVFGFTSFIMVIVHERVPDMQT--YPPLPDIFLDSVPRIPWAFAMTE 211

Query:    88 XXXXVLWTFHPFVFQSKSFHTVLLWCRVLACLVVCQMLRIVTFYSTQL--PGPNYHCRE- 144
                 +L      V       ++LL  R+ + +    +LR  T + T L  PG +  C   
Sbjct:   212 VCGMILCYIWLLVLLLHKHRSILLR-RLCSLMGTVFLLRCFTMFVTSLSVPGQHLQCTGK 270

Query:   145 --GSKLARLPRPESVVEVLLINFPRGMIYGCGDLIFSSH-MIFTLL-FVLTYHKYGTIRF 200
               GS   +L R  ++     +    G ++ CGD +FS H ++ T+L F +T +   +  F
Sbjct:   271 VYGSVWEKLHRAFAIWSGFGMTLT-G-VHTCGDYMFSGHTVVLTMLNFFVTEYTPRSWNF 328

Query:   201 IKQXXXXXXXXXXXXXXXXRKHYTVDVVVAWY-TVNLVVFF 240
             +                   +HY++DV +A+Y T  L +++
Sbjct:   329 LHTLSWVLNLFGIFFILAAHEHYSIDVFIAFYITTRLFLYY 369


>UNIPROTKB|F1S2F8 [details] [associations]
            symbol:SAMD8 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2000303 "regulation of ceramide biosynthetic process"
            evidence=IEA] [GO:0046513 "ceramide biosynthetic process"
            evidence=IEA] [GO:0030176 "integral to endoplasmic reticulum
            membrane" evidence=IEA] InterPro:IPR001660 PROSITE:PS50105
            SMART:SM00454 Gene3D:1.10.150.50 InterPro:IPR013761
            InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769 EMBL:CT737343
            InterPro:IPR025749 Pfam:PF14360 GeneTree:ENSGT00390000001630
            OMA:CNGEPSH Ensembl:ENSSSCT00000011296 Uniprot:F1S2F8
        Length = 478

 Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
 Identities = 51/221 (23%), Positives = 91/221 (41%)

Query:    29 ENWKIILGGIIFQYIHGLAAHAVHYLHQPGPLLQDSGYALIPELGEDKA-YISETXXXXX 87
             E WK IL  I    + G  +  +  +H+  P +Q   Y  +P++  D    I        
Sbjct:   211 EYWKTILSCIYVFIVFGFTSFIMVIVHERVPDMQT--YPPLPDIFLDSVPRIPWAFAMTE 268

Query:    88 XXXXVLWTFHPFVFQSKSFHTVLLWCRVLACLVVCQMLRIVTFYSTQL--PGPNYHCRE- 144
                 +L      V       ++LL  R+ + +    +LR  T + T L  PG +  C   
Sbjct:   269 VCGMILCYIWLLVLLLHKHRSILLR-RLCSLMGTVFLLRCFTMFVTSLSVPGQHLQCTGK 327

Query:   145 --GSKLARLPRPESVVEVLLINFPRGMIYGCGDLIFSSH-MIFTLL-FVLTYHKYGTIRF 200
               GS   +L R  ++     +    G ++ CGD +FS H ++ T+L F +T +   +  F
Sbjct:   328 IYGSVWEKLHRAFAIWSGFGMTLT-G-VHTCGDYMFSGHTVVLTMLNFFVTEYTPRSWNF 385

Query:   201 IKQXXXXXXXXXXXXXXXXRKHYTVDVVVAWY-TVNLVVFF 240
             +                   +HY++DV +A+Y T  L +++
Sbjct:   386 LHTLSWVLNLFGIFFILAAHEHYSIDVFIAFYITTRLFLYY 426


>MGI|MGI:1914880 [details] [associations]
            symbol:Samd8 "sterile alpha motif domain containing 8"
            species:10090 "Mus musculus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            [GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0006665
            "sphingolipid metabolic process" evidence=IEA] [GO:0006686
            "sphingomyelin biosynthetic process" evidence=NAS] [GO:0016020
            "membrane" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=NAS] [GO:0016740 "transferase activity" evidence=IEA]
            [GO:0030176 "integral to endoplasmic reticulum membrane"
            evidence=ISO] [GO:0046513 "ceramide biosynthetic process"
            evidence=ISO] [GO:2000303 "regulation of ceramide biosynthetic
            process" evidence=ISO] InterPro:IPR001660 PROSITE:PS50105
            SMART:SM00454 MGI:MGI:1914880 GO:GO:0016740 GO:GO:0030176
            Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
            Pfam:PF00536 SUPFAM:SSF47769 EMBL:AY294423 eggNOG:NOG259509
            InterPro:IPR025749 Pfam:PF14360 CTD:142891 HOGENOM:HOG000233822
            HOVERGEN:HBG048216 GO:GO:2000303 GO:GO:0006686 EMBL:AK006211
            EMBL:AK075749 IPI:IPI00117921 RefSeq:NP_080559.1 UniGene:Mm.102765
            ProteinModelPortal:Q9DA37 SMR:Q9DA37 PhosphoSite:Q9DA37
            PRIDE:Q9DA37 Ensembl:ENSMUST00000022292 GeneID:67630 KEGG:mmu:67630
            GeneTree:ENSGT00390000001630 InParanoid:Q9DA37 OMA:CNGEPSH
            OrthoDB:EOG498V0S NextBio:325085 Bgee:Q9DA37 CleanEx:MM_SAMD8
            Genevestigator:Q9DA37 GermOnline:ENSMUSG00000021770 Uniprot:Q9DA37
        Length = 478

 Score = 115 (45.5 bits), Expect = 0.00049, P = 0.00049
 Identities = 48/220 (21%), Positives = 90/220 (40%)

Query:    29 ENWKIILGGIIFQYIHGLAAHAVHYLHQPGPLLQDSGYALIPELGEDKAYISETXXXXXX 88
             E WK IL  +    + G  +  +  +H+  P +Q   Y  +P++  D             
Sbjct:   211 EYWKTILSCVYVFIVFGFTSFIMVIVHERVPDMQT--YPPLPDIFLDSVPRIPWAFSMTE 268

Query:    89 XXXVLWTFHPFVFQSKSFHTVLLWCRVLACLVVCQMLRIVTFYSTQL--PGPNYHCRE-- 144
                V+  +   +      H  +L  R+ + +    +LR  T + T L  PG +  C    
Sbjct:   269 VCGVILCYIWILVLLLHKHRSILLRRLCSLMGTVFLLRCFTMFVTSLSVPGQHLQCTGKI 328

Query:   145 -GSKLARLPRPESVVEVLLINFPRGMIYGCGDLIFSSH-MIFTLL-FVLTYHKYGTIRFI 201
              GS   +L R  ++     +    G ++ CGD +FS H ++ T+L F +T +   +  F+
Sbjct:   329 YGSVWEKLRRAFAIWSGFGMTLT-G-VHTCGDYMFSGHTVVLTMLNFFVTEYTPRSWNFL 386

Query:   202 KQXXXXXXXXXXXXXXXXRKHYTVDVVVAWY-TVNLVVFF 240
                                +HY++DV +A+Y T  L +++
Sbjct:   387 HTLSWVLNLFGIFFILAAHEHYSIDVFIAFYITTRLFLYY 426


>RGD|1306447 [details] [associations]
            symbol:Samd8 "sterile alpha motif domain containing 8"
            species:10116 "Rattus norvegicus" [GO:0030176 "integral to
            endoplasmic reticulum membrane" evidence=IEA;ISO] [GO:0046513
            "ceramide biosynthetic process" evidence=IEA;ISO] [GO:2000303
            "regulation of ceramide biosynthetic process" evidence=IEA;ISO]
            InterPro:IPR001660 PROSITE:PS50105 SMART:SM00454 RGD:1306447
            Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
            Pfam:PF00536 SUPFAM:SSF47769 eggNOG:NOG259509 InterPro:IPR025749
            Pfam:PF14360 EMBL:CH474061 CTD:142891 HOGENOM:HOG000233822
            HOVERGEN:HBG048216 GeneTree:ENSGT00390000001630 OMA:CNGEPSH
            OrthoDB:EOG498V0S EMBL:BC082100 IPI:IPI00471638
            RefSeq:NP_001012040.1 UniGene:Rn.21195 Ensembl:ENSRNOT00000018023
            GeneID:305684 KEGG:rno:305684 UCSC:RGD:1306447 InParanoid:Q641X0
            NextBio:654955 Genevestigator:Q641X0 Uniprot:Q641X0
        Length = 478

 Score = 114 (45.2 bits), Expect = 0.00064, P = 0.00064
 Identities = 49/221 (22%), Positives = 91/221 (41%)

Query:    29 ENWKIILGGIIFQYIHGLAAHAVHYLHQPGPLLQDSGYALIPELGEDKA-YISETXXXXX 87
             E WK +L  +    + G  +  +  +H+  P +Q   Y  +P++  D    I        
Sbjct:   211 EYWKTVLSCVYVFIVFGFTSFIMVIVHERVPDMQT--YPPLPDIFLDSVPRIPWAFSMTE 268

Query:    88 XXXXVLWTFHPFVFQSKSFHTVLLWCRVLACLVVCQMLRIVTFYSTQL--PGPNYHCRE- 144
                 +L      V       ++LL  R+ + +    +LR  T + T L  PG +  C   
Sbjct:   269 VCGMILCYIWILVLLLHKHRSILLR-RLCSLMGTVFLLRCFTMFVTSLSVPGQHLQCTGK 327

Query:   145 --GSKLARLPRPESVVEVLLINFPRGMIYGCGDLIFSSH-MIFTLL-FVLTYHKYGTIRF 200
               GS   +L R  ++     +    G ++ CGD +FS H ++ T+L F +T +   +  F
Sbjct:   328 VYGSVWEKLHRAFAIWSGFGMTLT-G-VHTCGDYMFSGHTVVLTMLNFFVTEYTPRSWNF 385

Query:   201 IKQXXXXXXXXXXXXXXXXRKHYTVDVVVAWY-TVNLVVFF 240
             +                   +HY++DV +A+Y T  L +++
Sbjct:   386 LHTLSWVLNLFGIFFILAAHEHYSIDVFIAFYITTRLFLYY 426


>WB|WBGene00004894 [details] [associations]
            symbol:sms-3 species:6239 "Caenorhabditis elegans"
            [GO:0016021 "integral to membrane" evidence=IEA]
            UniPathway:UPA00222 GO:GO:0016021 GO:GO:0016301 EMBL:FO081783
            eggNOG:NOG259509 InterPro:IPR025749 Pfam:PF14360 GO:GO:0006686
            GeneTree:ENSGT00390000001630 GO:GO:0047493 GO:GO:0033188 KO:K04714
            RefSeq:NP_497425.1 ProteinModelPortal:Q965Q4 STRING:Q965Q4
            EnsemblMetazoa:Y22D7AL.8 GeneID:175313 KEGG:cel:CELE_Y22D7AL.8
            UCSC:Y22D7AL.8 CTD:175313 WormBase:Y22D7AL.8 HOGENOM:HOG000019539
            InParanoid:Q965Q4 OMA:ISRTHYT NextBio:887622 Uniprot:Q965Q4
        Length = 340

 Score = 111 (44.1 bits), Expect = 0.00080, P = 0.00080
 Identities = 53/218 (24%), Positives = 88/218 (40%)

Query:    31 WKIILGGIIFQYIHGLAAHAV-HYLHQ--PGPLLQDSGYALIPELGEDKAYISETXXXXX 87
             W   +    F +I G++  AV  Y H   P   L D  ++L+ E    + + S       
Sbjct:    33 WAKCIFLFFFLFIAGMSNWAVLAYTHDYVPRESLPDIVFSLVSE----QRWASSLGDFCV 88

Query:    88 XXXXVLWTFHPFVFQSKSFHTVLLWCRVLACLVVCQMLRIVTFYSTQLPGPNYHCREGSK 147
                 V+      + Q +   T+L   RV+ C      +R VT  +TQLP   Y   +G  
Sbjct:    89 ALCIVMLGALLVIHQHRG--TILK--RVVFCAGTLYAMRSVTLAATQLPS-GYTDNQGRC 143

Query:   148 LARLPRPESVV------EVLLINFPRGMIYGCGDLIFSSH--MIFTLLFVLTYHKYGTIR 199
               ++     V       + + I F       CGDL+FS H  ++ T    + Y+   +I+
Sbjct:   144 RDQVESEAGVFFGRLFEQTIRIGFQSKDQMLCGDLLFSGHTLVMVTCSLAVAYYLPKSIK 203

Query:   200 FIKQXXXXXXXXXXXXXXXXRKHYTVDVVVAWYTVNLV 237
              ++                 R HYT+DVV+A++  N+V
Sbjct:   204 PLQWVSHVACLIGMICMTISRTHYTIDVVIAYWLSNMV 241


>UNIPROTKB|Q965Q4 [details] [associations]
            symbol:sms-3 "Putative phosphatidylcholine:ceramide
            cholinephosphotransferase 3" species:6239 "Caenorhabditis elegans"
            [GO:0016021 "integral to membrane" evidence=NAS] [GO:0047493
            "ceramide cholinephosphotransferase activity" evidence=ISS]
            [GO:0006686 "sphingomyelin biosynthetic process" evidence=ISS]
            UniPathway:UPA00222 GO:GO:0016021 GO:GO:0016301 EMBL:FO081783
            eggNOG:NOG259509 InterPro:IPR025749 Pfam:PF14360 GO:GO:0006686
            GeneTree:ENSGT00390000001630 GO:GO:0047493 GO:GO:0033188 KO:K04714
            RefSeq:NP_497425.1 ProteinModelPortal:Q965Q4 STRING:Q965Q4
            EnsemblMetazoa:Y22D7AL.8 GeneID:175313 KEGG:cel:CELE_Y22D7AL.8
            UCSC:Y22D7AL.8 CTD:175313 WormBase:Y22D7AL.8 HOGENOM:HOG000019539
            InParanoid:Q965Q4 OMA:ISRTHYT NextBio:887622 Uniprot:Q965Q4
        Length = 340

 Score = 111 (44.1 bits), Expect = 0.00080, P = 0.00080
 Identities = 53/218 (24%), Positives = 88/218 (40%)

Query:    31 WKIILGGIIFQYIHGLAAHAV-HYLHQ--PGPLLQDSGYALIPELGEDKAYISETXXXXX 87
             W   +    F +I G++  AV  Y H   P   L D  ++L+ E    + + S       
Sbjct:    33 WAKCIFLFFFLFIAGMSNWAVLAYTHDYVPRESLPDIVFSLVSE----QRWASSLGDFCV 88

Query:    88 XXXXVLWTFHPFVFQSKSFHTVLLWCRVLACLVVCQMLRIVTFYSTQLPGPNYHCREGSK 147
                 V+      + Q +   T+L   RV+ C      +R VT  +TQLP   Y   +G  
Sbjct:    89 ALCIVMLGALLVIHQHRG--TILK--RVVFCAGTLYAMRSVTLAATQLPS-GYTDNQGRC 143

Query:   148 LARLPRPESVV------EVLLINFPRGMIYGCGDLIFSSH--MIFTLLFVLTYHKYGTIR 199
               ++     V       + + I F       CGDL+FS H  ++ T    + Y+   +I+
Sbjct:   144 RDQVESEAGVFFGRLFEQTIRIGFQSKDQMLCGDLLFSGHTLVMVTCSLAVAYYLPKSIK 203

Query:   200 FIKQXXXXXXXXXXXXXXXXRKHYTVDVVVAWYTVNLV 237
              ++                 R HYT+DVV+A++  N+V
Sbjct:   204 PLQWVSHVACLIGMICMTISRTHYTIDVVIAYWLSNMV 241


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.141   0.448    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      287       262   0.00091  114 3  11 22  0.39    33
                                                     32  0.49    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  13
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  219 KB (2121 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.29u 0.10s 19.39t   Elapsed:  00:00:01
  Total cpu time:  19.30u 0.10s 19.40t   Elapsed:  00:00:01
  Start:  Sat May 11 10:38:35 2013   End:  Sat May 11 10:38:36 2013

Back to top