Query 023100
Match_columns 287
No_of_seqs 200 out of 399
Neff 5.7
Searched_HMMs 13730
Date Mon Mar 25 16:21:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023100.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/023100hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 54.7 7.9 0.00058 26.2 4.3 24 82-105 28-51 (67)
2 d1q08a_ a.6.1.3 (A:) Transcrip 36.8 23 0.0017 24.7 4.7 25 82-106 44-68 (94)
3 d2azeb1 e.63.1.2 (B:201-301) T 34.3 35 0.0026 24.5 5.5 26 80-105 4-29 (101)
4 d2azea1 e.63.1.1 (A:199-346) T 24.9 40 0.0029 26.0 4.5 17 82-98 11-27 (148)
5 d2azea1 e.63.1.1 (A:199-346) T 20.9 52 0.0038 25.3 4.4 25 81-105 3-27 (148)
6 d1nkpa_ a.38.1.1 (A:) Myc prot 18.1 1E+02 0.0074 20.6 5.2 24 82-105 57-80 (88)
7 d1t3ua_ d.244.1.1 (A:) ZapA ho 16.7 1.2E+02 0.0086 20.3 5.3 26 81-106 60-85 (92)
8 d1ykhb1 a.252.1.1 (B:2-130) RN 16.2 1.1E+02 0.0082 22.4 5.4 9 85-93 96-104 (129)
9 d1yzma1 a.2.19.1 (A:456-501) F 16.2 68 0.005 19.9 3.3 22 85-106 23-44 (46)
10 d2e74e1 f.23.24.1 (E:1-32) Pet 15.1 61 0.0044 18.1 2.6 12 217-228 11-22 (32)
No 1
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.72 E-value=7.9 Score=26.17 Aligned_cols=24 Identities=38% Similarity=0.563 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 023100 82 LKKKEKELQAKEAELRRREQDVRR 105 (287)
Q Consensus 82 l~~k~~EL~~ke~EL~rRE~eL~~ 105 (287)
...-|+||++....|+|.|++|.+
T Consensus 28 V~diE~eLerCk~~irrLeqel~~ 51 (67)
T d1k1fa_ 28 VGDIEQELERAKASIRRLEQEVNQ 51 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHH
Confidence 344677888888888888888854
No 2
>d1q08a_ a.6.1.3 (A:) Transcriptional regulator ZntR {Escherichia coli [TaxId: 562]}
Probab=36.76 E-value=23 Score=24.74 Aligned_cols=25 Identities=24% Similarity=0.462 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 023100 82 LKKKEKELQAKEAELRRREQDVRRK 106 (287)
Q Consensus 82 l~~k~~EL~~ke~EL~rRE~eL~~r 106 (287)
+.+|-+|+++|-+||++.+++|+.-
T Consensus 44 ~~~kl~~i~~kI~~L~~l~~~L~~l 68 (94)
T d1q08a_ 44 VQERLQEVEARIAELQSMQRSLQRL 68 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667778888888888887777653
No 3
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.27 E-value=35 Score=24.49 Aligned_cols=26 Identities=19% Similarity=0.211 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023100 80 ADLKKKEKELQAKEAELRRREQDVRR 105 (287)
Q Consensus 80 ~~l~~k~~EL~~ke~EL~rRE~eL~~ 105 (287)
..|++--++|+++|++|++.-+.++.
T Consensus 4 ~~L~~El~~L~~~E~~LD~li~~~~~ 29 (101)
T d2azeb1 4 EGLTQDLRQLQESEQQLDHLMNICTT 29 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777888888888876555544
No 4
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.90 E-value=40 Score=26.00 Aligned_cols=17 Identities=12% Similarity=0.417 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHHHH
Q 023100 82 LKKKEKELQAKEAELRR 98 (287)
Q Consensus 82 l~~k~~EL~~ke~EL~r 98 (287)
..++.+++++|.++|++
T Consensus 11 ~~~~~erI~~K~~~Lqe 27 (148)
T d2azea1 11 RQRRLERIKQKQSQLQE 27 (148)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34444444444444443
No 5
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.93 E-value=52 Score=25.35 Aligned_cols=25 Identities=12% Similarity=0.312 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 023100 81 DLKKKEKELQAKEAELRRREQDVRR 105 (287)
Q Consensus 81 ~l~~k~~EL~~ke~EL~rRE~eL~~ 105 (287)
|.++-++|.++|.+.+++|.++|+.
T Consensus 3 e~~~Le~E~~~~~erI~~K~~~Lqe 27 (148)
T d2azea1 3 ECQNLEVERQRRLERIKQKQSQLQE 27 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566777888888888888877765
No 6
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.09 E-value=1e+02 Score=20.64 Aligned_cols=24 Identities=25% Similarity=0.549 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 023100 82 LKKKEKELQAKEAELRRREQDVRR 105 (287)
Q Consensus 82 l~~k~~EL~~ke~EL~rRE~eL~~ 105 (287)
|++..++|....++|+++.++|++
T Consensus 57 L~~~~~~l~~~~~~l~~~~~~L~~ 80 (88)
T d1nkpa_ 57 VQAEEQKLISEEDLLRKRREQLKH 80 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444444444433
No 7
>d1t3ua_ d.244.1.1 (A:) ZapA homologue PA5227 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=16.67 E-value=1.2e+02 Score=20.25 Aligned_cols=26 Identities=19% Similarity=0.423 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023100 81 DLKKKEKELQAKEAELRRREQDVRRK 106 (287)
Q Consensus 81 ~l~~k~~EL~~ke~EL~rRE~eL~~r 106 (287)
++.+.+++++..++++++|-++|.++
T Consensus 60 e~~~~~~~~~~~~~~~~~~i~~L~~~ 85 (92)
T d1t3ua_ 60 DLLHRKERLDQESSSTRERVRELLDR 85 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555566666666666666666443
No 8
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=16.25 E-value=1.1e+02 Score=22.44 Aligned_cols=9 Identities=33% Similarity=0.313 Sum_probs=3.3
Q ss_pred HHHHHHHHH
Q 023100 85 KEKELQAKE 93 (287)
Q Consensus 85 k~~EL~~ke 93 (287)
-++|+...+
T Consensus 96 Le~E~~~~~ 104 (129)
T d1ykhb1 96 LQKKLVEVE 104 (129)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 9
>d1yzma1 a.2.19.1 (A:456-501) FYVE finger-containing Rab5 effector protein rabenosyn-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.22 E-value=68 Score=19.89 Aligned_cols=22 Identities=14% Similarity=0.367 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 023100 85 KEKELQAKEAELRRREQDVRRK 106 (287)
Q Consensus 85 k~~EL~~ke~EL~rRE~eL~~r 106 (287)
|-+|.+-.|+.|+..++|+.++
T Consensus 23 R~dEV~~Le~NLreLq~e~~~q 44 (46)
T d1yzma1 23 RMDEVRTLQENLRQLQDEYDQQ 44 (46)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhh
Confidence 4455566666666666665543
No 10
>d2e74e1 f.23.24.1 (E:1-32) PetL subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=15.07 E-value=61 Score=18.12 Aligned_cols=12 Identities=25% Similarity=0.465 Sum_probs=4.5
Q ss_pred HHHHHHHHHHHh
Q 023100 217 FLFYLLHIGFCI 228 (287)
Q Consensus 217 F~~~~~~i~f~v 228 (287)
|+..++.++.-+
T Consensus 11 fialffgiavgi 22 (32)
T d2e74e1 11 FIALFFGIAVGI 22 (32)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh
Confidence 333333443333
Done!