Query 023102
Match_columns 287
No_of_seqs 182 out of 1433
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 08:27:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023102.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023102hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00184 aquaporin NIP1; Provi 100.0 2E-51 4.2E-56 372.9 24.1 227 35-261 48-282 (296)
2 KOG0223 Aquaporin (major intri 100.0 4.7E-51 1E-55 358.2 21.4 221 33-254 3-228 (238)
3 PLN00182 putative aquaporin NI 100.0 1.6E-48 3.6E-53 351.7 26.1 222 37-258 38-260 (283)
4 PLN00026 aquaporin NIP; Provi 100.0 1.1E-47 2.4E-52 347.7 22.9 220 37-256 67-286 (298)
5 PTZ00016 aquaglyceroporin; Pro 100.0 1.1E-45 2.4E-50 336.1 24.0 220 36-255 45-293 (294)
6 PLN00183 putative aquaporin NI 100.0 7E-45 1.5E-49 327.0 22.6 222 35-256 39-260 (274)
7 PRK05420 aquaporin Z; Provisio 100.0 1E-44 2.2E-49 319.9 23.2 212 41-253 2-229 (231)
8 PLN00166 aquaporin TIP2; Provi 100.0 1.2E-44 2.5E-49 322.5 23.5 220 33-252 10-237 (250)
9 PLN00027 aquaporin TIP; Provis 100.0 9.2E-45 2E-49 324.1 22.8 220 34-253 13-240 (252)
10 COG0580 GlpF Glycerol uptake f 100.0 7.3E-45 1.6E-49 318.2 20.5 214 39-252 3-240 (241)
11 PLN00167 aquaporin TIP5; Provi 100.0 5.4E-44 1.2E-48 319.1 24.6 221 32-252 13-240 (256)
12 PF00230 MIP: Major intrinsic 100.0 3.6E-45 7.8E-50 322.7 16.7 214 34-247 1-227 (227)
13 KOG0224 Aquaporin (major intri 100.0 1.5E-45 3.3E-50 325.8 13.8 223 35-258 26-281 (316)
14 cd00333 MIP Major intrinsic pr 100.0 2.2E-40 4.8E-45 292.5 20.3 209 42-250 1-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 5.9E-39 1.3E-43 281.2 18.0 202 46-247 1-216 (216)
16 PLN00182 putative aquaporin NI 99.6 3.5E-15 7.6E-20 135.1 10.4 98 39-142 157-254 (283)
17 PLN00026 aquaporin NIP; Provi 99.6 3.5E-15 7.6E-20 135.8 7.6 100 154-253 68-173 (298)
18 PLN00184 aquaporin NIP1; Provi 99.6 4.1E-15 8.8E-20 135.5 7.7 99 155-253 52-156 (296)
19 cd00333 MIP Major intrinsic pr 99.6 1.2E-14 2.7E-19 128.3 10.4 100 37-139 126-227 (228)
20 PLN00183 putative aquaporin NI 99.5 2.3E-14 4.9E-19 129.4 9.5 100 40-145 160-259 (274)
21 KOG0223 Aquaporin (major intri 99.5 3.4E-14 7.3E-19 125.3 7.1 103 35-144 126-228 (238)
22 PLN00166 aquaporin TIP2; Provi 99.5 3.8E-14 8.3E-19 126.6 6.9 98 155-252 16-124 (250)
23 TIGR00861 MIP MIP family chann 99.5 9.8E-14 2.1E-18 121.7 8.8 96 38-136 119-215 (216)
24 PLN00167 aquaporin TIP5; Provi 99.5 1.2E-13 2.6E-18 123.8 8.0 99 155-253 20-129 (256)
25 PLN00027 aquaporin TIP; Provis 99.4 3E-13 6.6E-18 121.1 7.7 98 155-252 18-126 (252)
26 PTZ00016 aquaglyceroporin; Pro 99.4 3.7E-13 7.9E-18 122.9 7.2 99 155-253 48-152 (294)
27 PRK05420 aquaporin Z; Provisio 99.3 8.1E-12 1.8E-16 110.5 10.9 100 38-143 129-229 (231)
28 KOG0224 Aquaporin (major intri 99.3 4E-12 8.6E-17 113.6 5.4 100 155-254 30-136 (316)
29 COG0580 GlpF Glycerol uptake f 99.2 1.1E-11 2.4E-16 109.2 5.9 104 156-259 4-116 (241)
30 PF00230 MIP: Major intrinsic 99.2 1.1E-10 2.4E-15 102.9 10.4 97 37-137 131-227 (227)
31 COG2116 FocA Formate/nitrite f 93.0 3.4 7.4E-05 37.3 13.2 137 38-177 29-179 (265)
32 PRK11562 nitrite transporter N 90.3 6.1 0.00013 35.9 12.0 98 77-177 61-171 (268)
33 PRK09713 focB putative formate 87.7 11 0.00024 34.4 11.9 100 75-177 68-181 (282)
34 PRK10805 formate transporter; 85.9 28 0.0006 31.9 14.1 98 75-176 69-181 (285)
35 PF01226 Form_Nir_trans: Forma 84.0 6.8 0.00015 35.1 8.5 104 72-177 55-171 (250)
36 PF04632 FUSC: Fusaric acid re 62.3 1.8E+02 0.0039 29.3 13.9 112 112-254 382-493 (650)
37 TIGR00790 fnt formate/nitrite 51.6 1.7E+02 0.0037 25.8 11.9 76 101-176 68-157 (239)
38 PF10710 DUF2512: Protein of u 49.6 1.4E+02 0.003 24.2 8.1 64 156-222 3-71 (136)
39 KOG3030 Lipid phosphate phosph 39.1 89 0.0019 29.1 6.2 48 208-255 210-266 (317)
40 PF03033 Glyco_transf_28: Glyc 34.3 15 0.00033 28.7 0.4 19 95-113 7-25 (139)
41 PF12811 BaxI_1: Bax inhibitor 34.3 3.6E+02 0.0079 24.6 9.5 45 98-142 109-165 (274)
42 PRK10631 p-hydroxybenzoic acid 26.4 7.3E+02 0.016 25.6 13.7 124 98-253 381-504 (652)
43 PF01384 PHO4: Phosphate trans 26.3 5.3E+02 0.011 23.9 10.4 56 187-253 92-147 (326)
44 PRK12446 undecaprenyldiphospho 22.7 21 0.00045 33.4 -0.9 25 89-113 4-28 (352)
45 PRK15071 lipopolysaccharide AB 20.0 2.5E+02 0.0054 26.0 5.8 60 46-105 276-336 (356)
No 1
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=2e-51 Score=372.86 Aligned_cols=227 Identities=49% Similarity=0.854 Sum_probs=197.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCC
Q 023102 35 HYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHF 114 (287)
Q Consensus 35 ~~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~ 114 (287)
..+.+++|++++||+|||+|+|+++++.......+...++..++++||+++++.+++++++||+|+|||||+++++.|++
T Consensus 48 ~~~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~ 127 (296)
T PLN00184 48 SVSVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRF 127 (296)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCC
Confidence 35667899999999999999999998876443222223566789999999999999999999999999999999999999
Q ss_pred CCCcchhhhhhhhhHHHHHHHHHHHHhcCcc--------cccccCCCCChHHHHHHHHHHHHHHHHHHHhhccCCCcccc
Q 023102 115 PWKQVPIYAAAQLTGAVSASLTLRVLLHPIK--------HIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGE 186 (287)
Q Consensus 115 ~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--------~~~~~~~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~~~~ 186 (287)
+|.++++|+++|++|+++|+++++.+++... ...++.|..+..++++.|+++||+|+++++.+..+++..+.
T Consensus 128 ~~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~~~~ 207 (296)
T PLN00184 128 PLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRAIGE 207 (296)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcCCCc
Confidence 9999999999999999999999999885211 12234566688999999999999999999987666655456
Q ss_pred hhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcCCCceeeeeehhhHHHHHHHHHHHHHhcCCCCCCCCC
Q 023102 187 LAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRETDKPAHAIS 261 (287)
Q Consensus 187 ~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~~wvy~~~P~lGa~la~~l~~~~~~~~~~~~~~~ 261 (287)
..++.||+++.+.+++.+++||++|||||+|||+++.+.|+++||||+||++|+++|+++|+++..++++.++..
T Consensus 208 ~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~~~~~~WVy~vgPilGa~laal~y~~l~~~~~~~~~~~ 282 (296)
T PLN00184 208 LAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNTVRYTDKPLREIT 282 (296)
T ss_pred chHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhhcccccchHHhHHHHHHHHHHHHHHHHhcCCCcchhhc
Confidence 789999999999999999999999999999999999999999999999999999999999999998777766554
No 2
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.7e-51 Score=358.17 Aligned_cols=221 Identities=41% Similarity=0.660 Sum_probs=202.3
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhh
Q 023102 33 NEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVR 112 (287)
Q Consensus 33 ~~~~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g 112 (287)
.+..+.+.+|++++||++|++++|++|++...........+.+.+++.+|+++++.+++++++||||+|||||+++++.|
T Consensus 3 ~~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~ 82 (238)
T KOG0223|consen 3 GELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGG 82 (238)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhC
Confidence 45678899999999999999999999999887665445667889999999999999999999999999999999999999
Q ss_pred CCCCCcchhhhhhhhhHHHHHHHHHHHHhcCc---cccc--ccCCCCChHHHHHHHHHHHHHHHHHHHhhccCCCcccch
Q 023102 113 HFPWKQVPIYAAAQLTGAVSASLTLRVLLHPI---KHIG--TTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGEL 187 (287)
Q Consensus 113 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~---~~~~--~~~~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~~~~~ 187 (287)
++++.++..|+++|++|+++|+.+++.+.+++ ...+ ...+..+..|+++.|++.||.|+++++...+|+|+. .+
T Consensus 83 ~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~-~~ 161 (238)
T KOG0223|consen 83 KISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS-EL 161 (238)
T ss_pred CCcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc-cc
Confidence 99999999999999999999999999998763 2222 234566889999999999999999999977888776 89
Q ss_pred hHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcCCCceeeeeehhhHHHHHHHHHHHHHhcCC
Q 023102 188 AGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRETD 254 (287)
Q Consensus 188 ~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~~wvy~~~P~lGa~la~~l~~~~~~~~ 254 (287)
.++.||+++...+++++++||++|||||+|||++..+.|+++||||+||++|+++++++|++++.++
T Consensus 162 a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 162 APLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGSWDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred HHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcCCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 9999999999999999999999999999999999999999999999999999999999999998776
No 3
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=1.6e-48 Score=351.71 Aligned_cols=222 Identities=52% Similarity=0.877 Sum_probs=191.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCC
Q 023102 37 PPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPW 116 (287)
Q Consensus 37 ~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~ 116 (287)
..+++|++++||+|||+|+|+++++.......+...+...+++++|+++++.+++++++||||+|||||+++++.|+++|
T Consensus 38 ~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~ 117 (283)
T PLN00182 38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPW 117 (283)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCH
Confidence 34688999999999999999999876643222122345667889999999999999999999999999999999999999
Q ss_pred CcchhhhhhhhhHHHHHHHHHHHHhcCc-ccccccCCCCChHHHHHHHHHHHHHHHHHHHhhccCCCcccchhHHHHHHH
Q 023102 117 KQVPIYAAAQLTGAVSASLTLRVLLHPI-KHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSA 195 (287)
Q Consensus 117 ~~~~~yi~aQ~lGa~~g~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~~~~~~~~~ig~~ 195 (287)
.++++|+++|++|+++|+++++.+++.. .....+.|..+.+++++.|+++|++|+++++....+++..+...++.+|++
T Consensus 118 ~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~~~~~~l~iGl~ 197 (283)
T PLN00182 118 YQVPLYIGAQLTGSLLASLTLRLMFNVTPEAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRAVGELAGIAVGMT 197 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheeccccCCcchhHHHHHH
Confidence 9999999999999999999999988532 122235677788999999999999999999987556554455689999999
Q ss_pred HHHHHHhccCCCccccchhhhHHHHHhhcCCCceeeeeehhhHHHHHHHHHHHHHhcCCCCCC
Q 023102 196 VCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRETDKPAH 258 (287)
Q Consensus 196 v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~~wvy~~~P~lGa~la~~l~~~~~~~~~~~~ 258 (287)
+.+..++.+++||+++||||+||++++.+.|+++|+||++|++|+++|+++|+++..++.|..
T Consensus 198 V~~~~~~~g~~SGa~lNPARt~gpal~~~~~~~~wvY~vap~lGA~lgally~~l~~~~~~~~ 260 (283)
T PLN00182 198 IILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIIAGGFVYNLIRFTDKPLR 260 (283)
T ss_pred HHHHHHHccccCccccChHHHHHHHHHhccccceeHHHHHHHHHHHHHHHHHHHHhccCCccc
Confidence 999999999999999999999999999889999999999999999999999999975544433
No 4
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=1.1e-47 Score=347.67 Aligned_cols=220 Identities=45% Similarity=0.813 Sum_probs=192.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCC
Q 023102 37 PPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPW 116 (287)
Q Consensus 37 ~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~ 116 (287)
+.+++|++++||+|||+|+|++++............+...+++++|+++++.+++++++||||+|||||+++++.++++|
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~~~ 146 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPW 146 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCCcH
Confidence 44688999999999999999998765543222212345667899999999999999999999999999999999999999
Q ss_pred CcchhhhhhhhhHHHHHHHHHHHHhcCcccccccCCCCChHHHHHHHHHHHHHHHHHHHhhccCCCcccchhHHHHHHHH
Q 023102 117 KQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAV 196 (287)
Q Consensus 117 ~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~~~~~~~~~ig~~v 196 (287)
.+.++||++|++|+++|+++++.++++....+.+.|..+..++++.|+++||+|+++++.+..|++..+...++.||+++
T Consensus 147 ~~~~~YiiaQilGAi~aa~~~~~~~~~~~~~g~t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~~~~~~l~iGl~V 226 (298)
T PLN00026 147 KHVPAYIAAQVSASICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGATV 226 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccCceeeecccHHHHHHHHHHHHHHHHHhheeeecCCCCcCCccchHHHHHH
Confidence 99999999999999999999999987544344566777889999999999999999999775565555557889999999
Q ss_pred HHHHHhccCCCccccchhhhHHHHHhhcCCCceeeeeehhhHHHHHHHHHHHHHhcCCCC
Q 023102 197 CITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRETDKP 256 (287)
Q Consensus 197 ~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~~wvy~~~P~lGa~la~~l~~~~~~~~~~ 256 (287)
...+++.+++||++|||||+|||+++.++|+++|+||+||++|+++|+++|+++..++.+
T Consensus 227 ~~~~l~~g~~TGa~mNPARtlgPal~~~~~~~~wVy~vaPilGAilga~ly~~~~~~~~~ 286 (298)
T PLN00026 227 MLNILVAGPSTGGSMNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLREED 286 (298)
T ss_pred HHHHHHhcccCccccChHHHHHHHHhcCCchheeHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999999999999999999999999999998654433
No 5
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=1.1e-45 Score=336.06 Aligned_cols=220 Identities=29% Similarity=0.428 Sum_probs=184.6
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCC
Q 023102 36 YPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFP 115 (287)
Q Consensus 36 ~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~ 115 (287)
..++++|++++||+|||+|+|+++++.......+...+...+++++|+++++.+++++++||+|+|||||+++++.|+++
T Consensus 45 ~~~~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~ 124 (294)
T PTZ00016 45 EYRPNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFP 124 (294)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCC
Confidence 33678899999999999999999987654322222244567899999999999999999999999999999999999999
Q ss_pred CCcchhhhhhhhhHHHHHHHHHHHHhcCcc------------------cccccCCCCChHHHHHHHHHHHHHHHHHHHhh
Q 023102 116 WKQVPIYAAAQLTGAVSASLTLRVLLHPIK------------------HIGTTSPSGSDLQALIMEIVVTFSMMFVTSAV 177 (287)
Q Consensus 116 ~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~------------------~~~~~~~~~s~~~~~~~E~~~Tf~l~~~~~~~ 177 (287)
|.+.+.|+++|++|+++|+++++.++++.. ....+.|+.+..++++.|+++||+|+++++.+
T Consensus 125 ~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ila~ 204 (294)
T PTZ00016 125 WKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVILAI 204 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999876310 01123455577899999999999999999987
Q ss_pred ccCCCcc-cchhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhh------cCCC----ceeeeeehhhHHHHHHHHH
Q 023102 178 ATDTKAI-GELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIAS------SFYK----GIWVYLVGPVTGTFMGAWS 246 (287)
Q Consensus 178 ~~~~~~~-~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~------~~~~----~~wvy~~~P~lGa~la~~l 246 (287)
..+++.. ....|+.||+++..+.++.+++||++|||||+|||+++. ..|+ ++||||+||++|+++|+++
T Consensus 205 ~d~~~~~~~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~aall 284 (294)
T PTZ00016 205 TDPNNCPAFNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVLGMFL 284 (294)
T ss_pred ccCccCCCcCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHHHHHH
Confidence 4333322 346789999999999999999999999999999999986 2454 6899999999999999999
Q ss_pred HHHHhcCCC
Q 023102 247 YNMIRETDK 255 (287)
Q Consensus 247 ~~~~~~~~~ 255 (287)
|+++..++.
T Consensus 285 y~~ll~~~~ 293 (294)
T PTZ00016 285 YDKFIPPLI 293 (294)
T ss_pred HHHHhCCCC
Confidence 999986553
No 6
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=7e-45 Score=327.02 Aligned_cols=222 Identities=37% Similarity=0.703 Sum_probs=192.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCC
Q 023102 35 HYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHF 114 (287)
Q Consensus 35 ~~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~ 114 (287)
.++.+.+|.+++||++||+++|+++++...........+....++.+|+++.+.+++++++||+|+|||+|+++++.|++
T Consensus 39 ~~~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~i 118 (274)
T PLN00183 39 DMDLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGHF 118 (274)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcCC
Confidence 45678889999999999999999998765433222223455678899999999999999999999999999999999999
Q ss_pred CCCcchhhhhhhhhHHHHHHHHHHHHhcCcccccccCCCCChHHHHHHHHHHHHHHHHHHHhhccCCCcccchhHHHHHH
Q 023102 115 PWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGS 194 (287)
Q Consensus 115 ~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~~~~~~~~~ig~ 194 (287)
+|.++++||++|++|+++|+.+++.+++.......+.|..+..++++.|+++|++++++++....+++..+...++.||+
T Consensus 119 ~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~~~~~~~l~iGl 198 (274)
T PLN00183 119 PWSKVPLYITAQTVGSVLATYVGVSVYGVKADLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQSLGHLSGFVIGI 198 (274)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCcccHHHHHHHHHHHHHHHHHhhheeeccccCCCCceehHHHH
Confidence 99999999999999999999999988874433344556667789999999999999999988755444444567899999
Q ss_pred HHHHHHHhccCCCccccchhhhHHHHHhhcCCCceeeeeehhhHHHHHHHHHHHHHhcCCCC
Q 023102 195 AVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRETDKP 256 (287)
Q Consensus 195 ~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~~wvy~~~P~lGa~la~~l~~~~~~~~~~ 256 (287)
++...+++.+++||++|||||+|++++....|+++|+||++|++|+++++++|++++.+...
T Consensus 199 ~v~~~v~~~g~~TG~~~NPArtlgpai~~~~~~~~wvy~vapilGailaa~l~~~l~~~~~~ 260 (274)
T PLN00183 199 AIGLAVLITGPVSGGSMNPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMFHLLRLRTQP 260 (274)
T ss_pred HHHHHHHhccCCCCCEeCHHHHHHHHHhCCChhheehHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999865543
No 7
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=1e-44 Score=319.90 Aligned_cols=212 Identities=37% Similarity=0.586 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhcccc-cccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCCcc
Q 023102 41 LRKVIAEIIATYLLVFVTCGSAALSAY-DEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQV 119 (287)
Q Consensus 41 ~~~~~~Ef~gTf~lv~~~~~~~~~~~~-~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~ 119 (287)
+|++++||+|||+|+|+++++...... .+...+....++++|+++++.+++++++||+|+|||||+++++.|+++|.+.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 689999999999999999987654221 1222345667999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHHHHHHHHhcCccc-------cc-----ccCCC-CChHHHHHHHHHHHHHHHHHHHhhccCCCcccc
Q 023102 120 PIYAAAQLTGAVSASLTLRVLLHPIKH-------IG-----TTSPS-GSDLQALIMEIVVTFSMMFVTSAVATDTKAIGE 186 (287)
Q Consensus 120 ~~yi~aQ~lGa~~g~~~~~~~~~~~~~-------~~-----~~~~~-~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~~~~ 186 (287)
+.|+++|++|+++|+.+++.++++... +. .+.|. .+..++++.|+++|++|+++++.. .|+++...
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~-~~~~~~~~ 160 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGA-TDKRAPAG 160 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHH-hCCCCCCc
Confidence 999999999999999999988753211 10 11232 267899999999999999999987 45554456
Q ss_pred hhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcCC--CceeeeeehhhHHHHHHHHHHHHHhcC
Q 023102 187 LAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFY--KGIWVYLVGPVTGTFMGAWSYNMIRET 253 (287)
Q Consensus 187 ~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~--~~~wvy~~~P~lGa~la~~l~~~~~~~ 253 (287)
..|+.+|+.+....++.+++||++|||||+|||+++.++| +++|+||+||++|+++++++|++++..
T Consensus 161 ~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 229 (231)
T PRK05420 161 FAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEK 229 (231)
T ss_pred chHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhcc
Confidence 7899999999999999999999999999999999998755 589999999999999999999998743
No 8
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=1.2e-44 Score=322.52 Aligned_cols=220 Identities=33% Similarity=0.486 Sum_probs=187.2
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHhHhhcc--cccc---cccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHH
Q 023102 33 NEHYPPGFLRKVIAEIIATYLLVFVTCGSAALS--AYDE---HRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLA 107 (287)
Q Consensus 33 ~~~~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~--~~~~---~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla 107 (287)
+|.++.+.+|++++||++||+|+|+++++.... ..+. ...+...+++.+|+.+++.+++++++||+|+|||+|++
T Consensus 10 ~~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~ 89 (250)
T PLN00166 10 GDSFSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLG 89 (250)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHH
Confidence 344567788999999999999999999876531 1111 12345668899999999999999999999999999999
Q ss_pred HHHhhCCCCCcchhhhhhhhhHHHHHHHHHHHHhcCcccc-cccCCCCChHHHHHHHHHHHHHHHHHHHhhccCCCcc--
Q 023102 108 FAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHI-GTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAI-- 184 (287)
Q Consensus 108 ~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~~-- 184 (287)
+++.|+++|.+.++|+++|++|+++|+.+++.+++.+... ....++.+..++++.|+++||+|+++++....++++.
T Consensus 90 ~~l~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~~~ 169 (250)
T PLN00166 90 LAIGGNITIITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSL 169 (250)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 9999999999999999999999999999999887542211 1123445778999999999999999999876555432
Q ss_pred cchhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcCCCceeeeeehhhHHHHHHHHHHHHHhc
Q 023102 185 GELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRE 252 (287)
Q Consensus 185 ~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~~wvy~~~P~lGa~la~~l~~~~~~ 252 (287)
....|+.||+++...++..+++||++|||||+|||+++.++|+++|+||+||++|+++++++|+.++.
T Consensus 170 ~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~~~~~~wvywvgPi~Ga~~aa~~y~~l~~ 237 (250)
T PLN00166 170 GTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFI 237 (250)
T ss_pred ccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHHhc
Confidence 34789999999999999999999999999999999999999999999999999999999999998864
No 9
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=9.2e-45 Score=324.06 Aligned_cols=220 Identities=31% Similarity=0.427 Sum_probs=187.6
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHhHhhcc--ccc---ccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHH
Q 023102 34 EHYPPGFLRKVIAEIIATYLLVFVTCGSAALS--AYD---EHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAF 108 (287)
Q Consensus 34 ~~~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~--~~~---~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~ 108 (287)
|.+.+..+|++++||++||+|+++++++.... ..+ ....+.+..++++|+.+++.+++++++||+|+|||+|+++
T Consensus 13 ~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~ 92 (252)
T PLN00027 13 EASHPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGA 92 (252)
T ss_pred hhhcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHH
Confidence 34456789999999999999999999875421 111 1123456789999999999999999999999999999999
Q ss_pred HHhhCCCCCcchhhhhhhhhHHHHHHHHHHHHhcCcc-cccccCCCCChHHHHHHHHHHHHHHHHHHHhhccCCCcc--c
Q 023102 109 AAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIK-HIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAI--G 185 (287)
Q Consensus 109 ~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~~--~ 185 (287)
++.|+++|.+.++|+++|++|+++|+.+++.+.+... ....+.+..+..++++.|+++||+|+++++....|+++. .
T Consensus 93 ~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~ 172 (252)
T PLN00027 93 FIGGNITLLRGILYWIAQLLGSVVACLLLKFSTGGLETSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKGDLG 172 (252)
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccccCCcc
Confidence 9999999999999999999999999999987764321 112244566889999999999999999999875565532 3
Q ss_pred chhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcCCCceeeeeehhhHHHHHHHHHHHHHhcC
Q 023102 186 ELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRET 253 (287)
Q Consensus 186 ~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~~wvy~~~P~lGa~la~~l~~~~~~~ 253 (287)
...++.+|+.+...+++++++||++|||||+|||+++.++|+++|+||+||++|+++++++|++++.+
T Consensus 173 ~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 240 (252)
T PLN00027 173 IIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWAGPLIGGGIAGLVYELIFIG 240 (252)
T ss_pred chHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999999999999999999999999999999999999999999854
No 10
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.3e-45 Score=318.18 Aligned_cols=214 Identities=38% Similarity=0.574 Sum_probs=185.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhccc---ccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCC
Q 023102 39 GFLRKVIAEIIATYLLVFVTCGSAALSA---YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFP 115 (287)
Q Consensus 39 ~~~~~~~~Ef~gTf~lv~~~~~~~~~~~---~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~ 115 (287)
++.|++++||+|||+|+++++++.+... ..+...++..++++||+.+.+.+|+++++||+|+|||||+++++.|+++
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 5678899999999999999998876432 2234567778999999999999999999999999999999999999999
Q ss_pred CCcchhhhhhhhhHHHHHHHHHHHHhcCcc-----------cccccCCCC-ChHHHHHHHHHHHHHHHHHHHhhccCCCc
Q 023102 116 WKQVPIYAAAQLTGAVSASLTLRVLLHPIK-----------HIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTKA 183 (287)
Q Consensus 116 ~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~-----------~~~~~~~~~-s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~ 183 (287)
|++++.||++|++|+++|+.+++.++++.. ...++.|.. +..++++.|+++||+|++.++.+.+|++.
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~~ 162 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGNA 162 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 999999999999999999999999887321 112355653 67889999999999999999998666655
Q ss_pred ccchhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhc---------CCCceeeeeehhhHHHHHHHHHHHHHhc
Q 023102 184 IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASS---------FYKGIWVYLVGPVTGTFMGAWSYNMIRE 252 (287)
Q Consensus 184 ~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~---------~~~~~wvy~~~P~lGa~la~~l~~~~~~ 252 (287)
+....|+.||+.+....+..++.||.++|||||+||++... +++|+|+||++|++|+++++++|+.++.
T Consensus 163 ~~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~~ 240 (241)
T COG0580 163 NAGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLLG 240 (241)
T ss_pred cccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHcc
Confidence 33599999999999999999999999999999999999653 2258999999999999999999998764
No 11
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=5.4e-44 Score=319.05 Aligned_cols=221 Identities=29% Similarity=0.445 Sum_probs=186.4
Q ss_pred ccCCCChhHHHHHHHHHHHHHHHHHHHHhHhhcccc---cc--cccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHH
Q 023102 32 WNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAY---DE--HRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTL 106 (287)
Q Consensus 32 ~~~~~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~---~~--~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTl 106 (287)
+++...++.+|++++||+|||+|+++++++...... ++ ...+++.+++.+|+++++.+++++++||+|+|||||+
T Consensus 13 ~~~~~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl 92 (256)
T PLN00167 13 FQQSVTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTF 92 (256)
T ss_pred hhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHH
Confidence 344567789999999999999999999988764321 11 1234677999999999999999999999999999999
Q ss_pred HHHHhhCCCCCcchhhhhhhhhHHHHHHHHHHHHhcCccccccc-CCCCChHHHHHHHHHHHHHHHHHHHhhccCCCc-c
Q 023102 107 AFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTT-SPSGSDLQALIMEIVVTFSMMFVTSAVATDTKA-I 184 (287)
Q Consensus 107 a~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~-~ 184 (287)
++++.|+++|.+++.|+++|++|+++|+.+++.+++........ .+..+.+++++.|+++|++|+++++....+++. .
T Consensus 93 ~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~~ 172 (256)
T PLN00167 93 GMAVGGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVPTYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGLL 172 (256)
T ss_pred HHHHhCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHHHhccccccCC
Confidence 99999999999999999999999999999998886532211111 123466789999999999999999986433332 2
Q ss_pred cchhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcCCCceeeeeehhhHHHHHHHHHHHHHhc
Q 023102 185 GELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRE 252 (287)
Q Consensus 185 ~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~~wvy~~~P~lGa~la~~l~~~~~~ 252 (287)
+...|+.+|+.+....+..+++||++|||||+|||+++.+.|+++|+||+||++|+++++++|++++.
T Consensus 173 ~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~~~~~~wvywvgP~~Ga~l~a~~y~~l~~ 240 (256)
T PLN00167 173 GAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAGSFKNQAVYWVGPLLGGAVAGLLYDNVVF 240 (256)
T ss_pred CCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhccCccCcEEEeHHHHHHHHHHHHHHHHHhC
Confidence 34679999999999999999999999999999999999989999999999999999999999999984
No 12
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=3.6e-45 Score=322.72 Aligned_cols=214 Identities=41% Similarity=0.625 Sum_probs=183.5
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHhHhhc-ccccc-----cccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHH
Q 023102 34 EHYPPGFLRKVIAEIIATYLLVFVTCGSAAL-SAYDE-----HRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLA 107 (287)
Q Consensus 34 ~~~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~-~~~~~-----~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla 107 (287)
|.++.+++|++++||+||++++|+++++... ..... ...+...+++++|+++++.+++++++||+|+|||||++
T Consensus 1 ~~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla 80 (227)
T PF00230_consen 1 ELKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLA 80 (227)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhh
Confidence 4677899999999999999999999886542 11111 12356678899999999999999999999999999999
Q ss_pred HHHhhCCCCCcchhhhhhhhhHHHHHHHHHHHHhcCc---ccccc--cCCCCChHHHHHHHHHHHHHHHHHHHhhccCCC
Q 023102 108 FAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPI---KHIGT--TSPSGSDLQALIMEIVVTFSMMFVTSAVATDTK 182 (287)
Q Consensus 108 ~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~---~~~~~--~~~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~ 182 (287)
.++.|++++.+++.|+++|++|+++|+.+++.++++. ..... ..+..+..++++.|+++|++|+++++....+++
T Consensus 81 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~ 160 (227)
T PF00230_consen 81 FALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKR 160 (227)
T ss_dssp HHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred eeeeeeecccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhccccc
Confidence 9999999999999999999999999999999998753 12222 234558899999999999999999999866655
Q ss_pred cc--cchhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcCCCceeeeeehhhHHHHHHHHHH
Q 023102 183 AI--GELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSY 247 (287)
Q Consensus 183 ~~--~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~~wvy~~~P~lGa~la~~l~ 247 (287)
+. +.+.|+.||+++.+..+..++.||++|||||+||++++...|+++|+||++|++|+++|+++|
T Consensus 161 ~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 161 KFPLGPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGIWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp SSTSSGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred ccccccccceeEEEEEeecccccccccccccCchhhcCceeecccCCeEEEEEehHHHHHHHHHhhC
Confidence 43 346899999999999999999999999999999999999999999999999999999999998
No 13
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-45 Score=325.75 Aligned_cols=223 Identities=30% Similarity=0.496 Sum_probs=192.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHhHhhccccc-ccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhC
Q 023102 35 HYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYD-EHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRH 113 (287)
Q Consensus 35 ~~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~ 113 (287)
..++++.|++++||+||++|+++++++.++...+ +...++..+.++||+++++.+++.+++||||+|||||+++++.||
T Consensus 26 ~i~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~ 105 (316)
T KOG0224|consen 26 HIRNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGR 105 (316)
T ss_pred HHHHHHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcC
Confidence 4578899999999999999999999988765433 334556778899999999999999999999999999999999999
Q ss_pred CCCCcchhhhhhhhhHHHHHHHHHHHHhcCcc---------c--------ccccCCC--CChHHHHHHHHHHHHHHHHHH
Q 023102 114 FPWKQVPIYAAAQLTGAVSASLTLRVLLHPIK---------H--------IGTTSPS--GSDLQALIMEIVVTFSMMFVT 174 (287)
Q Consensus 114 ~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~---------~--------~~~~~~~--~s~~~~~~~E~~~Tf~l~~~~ 174 (287)
++|++.++|+++|++||++|++.+|.++.+.. . ..+|.|. .+.+++|+.|+++|.+|+..+
T Consensus 106 ~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~l 185 (316)
T KOG0224|consen 106 LPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLCL 185 (316)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhhe
Confidence 99999999999999999999999999887211 1 1134554 478999999999999999999
Q ss_pred HhhccCCCcc--cchhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhc-----------CCCceeeeeehhhHHHH
Q 023102 175 SAVATDTKAI--GELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASS-----------FYKGIWVYLVGPVTGTF 241 (287)
Q Consensus 175 ~~~~~~~~~~--~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~-----------~~~~~wvy~~~P~lGa~ 241 (287)
+++ +|+|+. ..+.|+.+|+.+.++....+..+|..+||||||||+++.. ...++|+.|++|++|++
T Consensus 186 ~aI-~D~rN~~p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~Gai 264 (316)
T KOG0224|consen 186 FAI-TDKRNPIPTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGAI 264 (316)
T ss_pred eEE-ecCCCCCCcchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhhhhh
Confidence 987 566542 4578999999999999999999999999999999999952 12568999999999999
Q ss_pred HHHHHHHHHhcCCCCCC
Q 023102 242 MGAWSYNMIRETDKPAH 258 (287)
Q Consensus 242 la~~l~~~~~~~~~~~~ 258 (287)
+++++|+++...+.|+.
T Consensus 265 ~G~~iY~~~Ig~h~~~~ 281 (316)
T KOG0224|consen 265 LGGWIYDFFIGFHIPRE 281 (316)
T ss_pred hhhhhheeeeeccCCCC
Confidence 99999999988777744
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=2.2e-40 Score=292.48 Aligned_cols=209 Identities=40% Similarity=0.642 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcccccc-cccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCCcch
Q 023102 42 RKVIAEIIATYLLVFVTCGSAALSAYDE-HRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVP 120 (287)
Q Consensus 42 ~~~~~Ef~gTf~lv~~~~~~~~~~~~~~-~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~ 120 (287)
|++++||+|||+++++++++........ ...+....++.+|+.+.+.+++++++||+|+|||+|+++++.|+++|.+.+
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~ 80 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI 80 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHH
Confidence 5789999999999999999876543221 123456789999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHHHHHHHHhcCccc----cc-------ccCC--CCChHHHHHHHHHHHHHHHHHHHhhccCCCc--cc
Q 023102 121 IYAAAQLTGAVSASLTLRVLLHPIKH----IG-------TTSP--SGSDLQALIMEIVVTFSMMFVTSAVATDTKA--IG 185 (287)
Q Consensus 121 ~yi~aQ~lGa~~g~~~~~~~~~~~~~----~~-------~~~~--~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~--~~ 185 (287)
.|+++|++|+++|+.+++.++++... .. ++.| +.+..++++.|+++|++|++.++....+++. ..
T Consensus 81 ~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~~~~ 160 (228)
T cd00333 81 PYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGPPPG 160 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccCCCC
Confidence 99999999999999999998863211 10 1223 3477899999999999999999987544332 23
Q ss_pred chhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcC---CCceeeeeehhhHHHHHHHHHHHHH
Q 023102 186 ELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSF---YKGIWVYLVGPVTGTFMGAWSYNMI 250 (287)
Q Consensus 186 ~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~---~~~~wvy~~~P~lGa~la~~l~~~~ 250 (287)
...++.+|+.+....++.+++||+++||||++++++..+. |+++|+||++|++|+++|+++|+++
T Consensus 161 ~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 161 GLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred CcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 4678999999999999999999999999999999999875 9999999999999999999999874
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=5.9e-39 Score=281.21 Aligned_cols=202 Identities=38% Similarity=0.594 Sum_probs=170.8
Q ss_pred HHHHHHHHHHHHHHhHhhccccc----c-cccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCCcch
Q 023102 46 AEIIATYLLVFVTCGSAALSAYD----E-HRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVP 120 (287)
Q Consensus 46 ~Ef~gTf~lv~~~~~~~~~~~~~----~-~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~ 120 (287)
+||+|||+++++++++....... . ...+...+++.+|+.+.+.+++++++||+|+|||+|+++++.|+++|.+.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 59999999999999887642111 1 111456789999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHHHHHHHHhcCcc--ccc-cc--CCCCChHHHHHHHHHHHHHHHHHHHhhccCCCc--ccchhHHHHH
Q 023102 121 IYAAAQLTGAVSASLTLRVLLHPIK--HIG-TT--SPSGSDLQALIMEIVVTFSMMFVTSAVATDTKA--IGELAGIAVG 193 (287)
Q Consensus 121 ~yi~aQ~lGa~~g~~~~~~~~~~~~--~~~-~~--~~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~--~~~~~~~~ig 193 (287)
.|+++|++|+++|+.+++.++++.. ... .. .++.+..++++.|+++|++++++++....++++ .....++.+|
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~iG 160 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPRGGFAPLAIG 160 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCCCccHHHHHH
Confidence 9999999999999999998886432 111 11 123478899999999999999999987443222 1236899999
Q ss_pred HHHHHHHHhccCCCccccchhhhHHHHHhhc--CCCceeeeeehhhHHHHHHHHHH
Q 023102 194 SAVCITSVLAGPVSGGSMNPARTVGPAIASS--FYKGIWVYLVGPVTGTFMGAWSY 247 (287)
Q Consensus 194 ~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~--~~~~~wvy~~~P~lGa~la~~l~ 247 (287)
+.+...+++.+++||+++||||+++++++.+ .|+++|+||++|++|+++++++|
T Consensus 161 ~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 161 LLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999987 89999999999999999999876
No 16
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.60 E-value=3.5e-15 Score=135.14 Aligned_cols=98 Identities=30% Similarity=0.428 Sum_probs=84.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCCc
Q 023102 39 GFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQ 118 (287)
Q Consensus 39 ~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 118 (287)
+.++.+++|+++||+|+++++++...++.. . ...++.+|+.+++.+++.+++||+|+|||+|+++++.++ .|.+
T Consensus 157 s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~---~--~~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~-~~~~ 230 (283)
T PLN00182 157 SSGQALVAEIIISFLLMFVISGVATDSRAV---G--ELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG-RYKG 230 (283)
T ss_pred chHHHHHHHHHHHHHHHHHHHhheeccccC---C--cchhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc-cccc
Confidence 568999999999999999988754432211 1 126889999999999999999999999999999999865 6899
Q ss_pred chhhhhhhhhHHHHHHHHHHHHhc
Q 023102 119 VPIYAAAQLTGAVSASLTLRVLLH 142 (287)
Q Consensus 119 ~~~yi~aQ~lGa~~g~~~~~~~~~ 142 (287)
.|+||++|++|+++|+++++.+..
T Consensus 231 ~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 231 IWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999998874
No 17
>PLN00026 aquaporin NIP; Provisional
Probab=99.58 E-value=3.5e-15 Score=135.78 Aligned_cols=100 Identities=23% Similarity=0.255 Sum_probs=84.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhhccCC-Ccc--cc--hhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhc-CCC
Q 023102 154 GSDLQALIMEIVVTFSMMFVTSAVATDT-KAI--GE--LAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASS-FYK 227 (287)
Q Consensus 154 ~s~~~~~~~E~~~Tf~l~~~~~~~~~~~-~~~--~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~-~~~ 227 (287)
.+.++.++.|+++||+|+++++.....+ +.. .. ..++.+|+++.+.+++.+.+||+++||||++++++.+. .|.
T Consensus 68 ~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~~~~ 147 (298)
T PLN00026 68 VSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWK 147 (298)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCCcHH
Confidence 3577999999999999999998642221 111 12 23579999999999999999999999999999999876 789
Q ss_pred ceeeeeehhhHHHHHHHHHHHHHhcC
Q 023102 228 GIWVYLVGPVTGTFMGAWSYNMIRET 253 (287)
Q Consensus 228 ~~wvy~~~P~lGa~la~~l~~~~~~~ 253 (287)
+.|+||++|++|+++|+++++.++.+
T Consensus 148 ~~~~YiiaQilGAi~aa~~~~~~~~~ 173 (298)
T PLN00026 148 HVPAYIAAQVSASICASFALKGVFHP 173 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999998854
No 18
>PLN00184 aquaporin NIP1; Provisional
Probab=99.57 E-value=4.1e-15 Score=135.53 Aligned_cols=99 Identities=24% Similarity=0.322 Sum_probs=83.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhhccCC--Cc-ccch--hHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhc-CCCc
Q 023102 155 SDLQALIMEIVVTFSMMFVTSAVATDT--KA-IGEL--AGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASS-FYKG 228 (287)
Q Consensus 155 s~~~~~~~E~~~Tf~l~~~~~~~~~~~--~~-~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~-~~~~ 228 (287)
+..+.++.|+++||+|+++.++..... +. .... .++.+|+++++.+++.+++||+++|||+++++++.+. .|.+
T Consensus 52 ~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~~~ 131 (296)
T PLN00184 52 PFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQ 131 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCHHH
Confidence 467899999999999999998764221 11 1123 4567799999999999999999999999999999877 7999
Q ss_pred eeeeeehhhHHHHHHHHHHHHHhcC
Q 023102 229 IWVYLVGPVTGTFMGAWSYNMIRET 253 (287)
Q Consensus 229 ~wvy~~~P~lGa~la~~l~~~~~~~ 253 (287)
.|+||++|++|+++|+++++.++..
T Consensus 132 ~~~YiiaQllGA~lga~~~~~l~~~ 156 (296)
T PLN00184 132 VPAYVISQVIGSTLAAATLRLLFGL 156 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999853
No 19
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.57 E-value=1.2e-14 Score=128.33 Aligned_cols=100 Identities=28% Similarity=0.325 Sum_probs=85.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCC--
Q 023102 37 PPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHF-- 114 (287)
Q Consensus 37 ~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~-- 114 (287)
..+.++.++.|+++|++|++.++......... ......++.+|+.+.+.+++.+++||+|+|||+++++.+.++.
T Consensus 126 ~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~---~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~ 202 (228)
T cd00333 126 GVSNGNAFFVEFIGTFILVLVVFATTDDPNGP---PPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLAR 202 (228)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHccccccC---CCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhcccc
Confidence 45788999999999999999988765432210 1223478999999999999999999999999999999999987
Q ss_pred CCCcchhhhhhhhhHHHHHHHHHHH
Q 023102 115 PWKQVPIYAAAQLTGAVSASLTLRV 139 (287)
Q Consensus 115 ~~~~~~~yi~aQ~lGa~~g~~~~~~ 139 (287)
+|.+.|+||++|++|+++|+++++.
T Consensus 203 ~~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 203 HWHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred ccceeehhhhHHHHHHHHHHHHHHh
Confidence 7999999999999999999988764
No 20
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.54 E-value=2.3e-14 Score=129.42 Aligned_cols=100 Identities=25% Similarity=0.370 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCCcc
Q 023102 40 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQV 119 (287)
Q Consensus 40 ~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~ 119 (287)
.++.++.|+++|+++++.+++......... ...++.+|+.+++.+++.+++||+|+|||+|+++++.+ .+|.+.
T Consensus 160 ~~~~~~~E~v~T~iLv~~i~~~~~~~~~~~-----~~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~-~~~~~~ 233 (274)
T PLN00183 160 CSSAFWVEFIATFIVMFLAASLTSQPQSLG-----HLSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS-WDFKDI 233 (274)
T ss_pred HHHHHHHHHHHHHHHHHhhheeeccccCCC-----CceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-CChhhe
Confidence 578999999999999999887654322111 12478899999999999999999999999999999987 489999
Q ss_pred hhhhhhhhhHHHHHHHHHHHHhcCcc
Q 023102 120 PIYAAAQLTGAVSASLTLRVLLHPIK 145 (287)
Q Consensus 120 ~~yi~aQ~lGa~~g~~~~~~~~~~~~ 145 (287)
|+||++|++|+++|+++++.+..+..
T Consensus 234 wvy~vapilGailaa~l~~~l~~~~~ 259 (274)
T PLN00183 234 WIYITAPTIGAVAGALMFHLLRLRTQ 259 (274)
T ss_pred ehHHHHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999976543
No 21
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.50 E-value=3.4e-14 Score=125.28 Aligned_cols=103 Identities=32% Similarity=0.389 Sum_probs=89.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCC
Q 023102 35 HYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHF 114 (287)
Q Consensus 35 ~~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~ 114 (287)
....+..|.++.|++.||+||++.++.....+.. ...++.+|+++.+.+++.+++||+++|||+++++++..+
T Consensus 126 ~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~------~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~- 198 (238)
T KOG0223|consen 126 APGLSTGQGLVIEIILTFILVFTVFATATDPRRS------ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYG- 198 (238)
T ss_pred CCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc------ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhc-
Confidence 3455778999999999999999988744322222 358899999999999999999999999999999999988
Q ss_pred CCCcchhhhhhhhhHHHHHHHHHHHHhcCc
Q 023102 115 PWKQVPIYAAAQLTGAVSASLTLRVLLHPI 144 (287)
Q Consensus 115 ~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 144 (287)
.|..+|+||++|++|+++++++++.++.++
T Consensus 199 ~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 199 SWDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred CCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 499999999999999999999999988755
No 22
>PLN00166 aquaporin TIP2; Provisional
Probab=99.49 E-value=3.8e-14 Score=126.58 Aligned_cols=98 Identities=22% Similarity=0.344 Sum_probs=82.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhhccC--CC---c---ccc--hhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhc
Q 023102 155 SDLQALIMEIVVTFSMMFVTSAVATD--TK---A---IGE--LAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASS 224 (287)
Q Consensus 155 s~~~~~~~E~~~Tf~l~~~~~~~~~~--~~---~---~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~ 224 (287)
+.+++++.|+++||+|+++.++...+ +. + ... ..++.+|+.+++.+++++++||+++||||++++++.++
T Consensus 16 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g~ 95 (250)
T PLN00166 16 ASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGN 95 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCC
Confidence 55789999999999999998886432 11 0 111 35678999999999999999999999999999999765
Q ss_pred -CCCceeeeeehhhHHHHHHHHHHHHHhc
Q 023102 225 -FYKGIWVYLVGPVTGTFMGAWSYNMIRE 252 (287)
Q Consensus 225 -~~~~~wvy~~~P~lGa~la~~l~~~~~~ 252 (287)
.|...|+||++|++|+++|+.+++.++.
T Consensus 96 ~~~~~~~~y~~aq~lGa~~~a~~~~~~~~ 124 (250)
T PLN00166 96 ITIITGFFYWIAQCLGSIVACLLLVFVTN 124 (250)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 6888999999999999999999998864
No 23
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.48 E-value=9.8e-14 Score=121.66 Aligned_cols=96 Identities=25% Similarity=0.280 Sum_probs=81.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhh-CCCC
Q 023102 38 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVR-HFPW 116 (287)
Q Consensus 38 ~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g-~~~~ 116 (287)
.+.++.++.|+++|++++++.+.....+.... .....++.+|+.+...++..+.+||+|+|||+++++.+.+ ..+|
T Consensus 119 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~---~~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~ 195 (216)
T TIGR00861 119 VSSGQAFFVEFIGTAILVLVIFATTDPRNRVP---RGGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGW 195 (216)
T ss_pred ccHHHHHHHHHHHHHHHHHHHheeecCCCCCC---CCccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhccccc
Confidence 47889999999999999999887654322111 1114789999999999999999999999999999999986 4789
Q ss_pred CcchhhhhhhhhHHHHHHHH
Q 023102 117 KQVPIYAAAQLTGAVSASLT 136 (287)
Q Consensus 117 ~~~~~yi~aQ~lGa~~g~~~ 136 (287)
.+.|+||++|++|+++++.+
T Consensus 196 ~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 196 GNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred cceeHHHHHHHHHHHHHHHh
Confidence 99999999999999999875
No 24
>PLN00167 aquaporin TIP5; Provisional
Probab=99.47 E-value=1.2e-13 Score=123.81 Aligned_cols=99 Identities=21% Similarity=0.303 Sum_probs=84.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhhccCCC---cc-------cchhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhc
Q 023102 155 SDLQALIMEIVVTFSMMFVTSAVATDTK---AI-------GELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASS 224 (287)
Q Consensus 155 s~~~~~~~E~~~Tf~l~~~~~~~~~~~~---~~-------~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~ 224 (287)
+.++.++.|+++||+++++.++...+.+ .+ ....++.+|+++.+.+++.+++||+++|||+++++.+.+.
T Consensus 20 ~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~g~ 99 (256)
T PLN00167 20 NALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVGGH 99 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHhCC
Confidence 4678999999999999999887644221 10 1246899999999999999999999999999999999865
Q ss_pred -CCCceeeeeehhhHHHHHHHHHHHHHhcC
Q 023102 225 -FYKGIWVYLVGPVTGTFMGAWSYNMIRET 253 (287)
Q Consensus 225 -~~~~~wvy~~~P~lGa~la~~l~~~~~~~ 253 (287)
.|...|+||++|++|+++|+.+++.++..
T Consensus 100 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 129 (256)
T PLN00167 100 ISVPTAMFYWISQMLASVMACLFLKVTTVG 129 (256)
T ss_pred CcHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 68999999999999999999999888643
No 25
>PLN00027 aquaporin TIP; Provisional
Probab=99.42 E-value=3e-13 Score=121.09 Aligned_cols=98 Identities=20% Similarity=0.316 Sum_probs=81.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhhcc------CCCc--ccc--hhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhc
Q 023102 155 SDLQALIMEIVVTFSMMFVTSAVAT------DTKA--IGE--LAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASS 224 (287)
Q Consensus 155 s~~~~~~~E~~~Tf~l~~~~~~~~~------~~~~--~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~ 224 (287)
...+.++.|+++||+|+++.++... ++++ ... ..++.+|+++.+.+++.+++||+++||||++++.+.++
T Consensus 18 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~ 97 (252)
T PLN00027 18 DALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGN 97 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCC
Confidence 3468899999999999999887531 1111 111 46899999999999999999999999999999998665
Q ss_pred -CCCceeeeeehhhHHHHHHHHHHHHHhc
Q 023102 225 -FYKGIWVYLVGPVTGTFMGAWSYNMIRE 252 (287)
Q Consensus 225 -~~~~~wvy~~~P~lGa~la~~l~~~~~~ 252 (287)
.|...|+||++|++|+++|+++++++..
T Consensus 98 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~ 126 (252)
T PLN00027 98 ITLLRGILYWIAQLLGSVVACLLLKFSTG 126 (252)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6788999999999999999999988763
No 26
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.41 E-value=3.7e-13 Score=122.94 Aligned_cols=99 Identities=25% Similarity=0.380 Sum_probs=83.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhhccCCCc---c-c-chhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhc-CCCc
Q 023102 155 SDLQALIMEIVVTFSMMFVTSAVATDTKA---I-G-ELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASS-FYKG 228 (287)
Q Consensus 155 s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~---~-~-~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~-~~~~ 228 (287)
...+.++.|+++||+++++.++...+... . + ...++.+|+++.+.+++.+.+||+++|||+++++++.+. .|..
T Consensus 48 ~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~ 127 (294)
T PTZ00016 48 PNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKK 127 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHH
Confidence 34689999999999999988876433211 1 1 235678999999999999999999999999999999887 7999
Q ss_pred eeeeeehhhHHHHHHHHHHHHHhcC
Q 023102 229 IWVYLVGPVTGTFMGAWSYNMIRET 253 (287)
Q Consensus 229 ~wvy~~~P~lGa~la~~l~~~~~~~ 253 (287)
.|+||++|++|+++|+.+.+.++.+
T Consensus 128 ~~~YiiaQ~lGa~~ga~ll~~~~~~ 152 (294)
T PTZ00016 128 LPGYFVAQLLGAFVGAACVYGLYYG 152 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999999999888755
No 27
>PRK05420 aquaporin Z; Provisional
Probab=99.34 E-value=8.1e-12 Score=110.51 Aligned_cols=100 Identities=23% Similarity=0.321 Sum_probs=83.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhC-CCC
Q 023102 38 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRH-FPW 116 (287)
Q Consensus 38 ~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~-~~~ 116 (287)
.+..+.++.|+++|++|+++.+.....+. . . ...++.+|+.+....+..++.||+.+|||+++++.+..+ ..+
T Consensus 129 ~~~~~~~~~E~v~T~iLv~~i~~~~~~~~-~---~--~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~ 202 (231)
T PRK05420 129 YSLLAALVCEVVLTAFFLLVILGATDKRA-P---A--GFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWAL 202 (231)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhCCCC-C---C--cchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCc
Confidence 36789999999999999998887654221 1 1 136889999999999999999999999999999998753 344
Q ss_pred CcchhhhhhhhhHHHHHHHHHHHHhcC
Q 023102 117 KQVPIYAAAQLTGAVSASLTLRVLLHP 143 (287)
Q Consensus 117 ~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 143 (287)
...|+||++|++|+++++++.+.+..+
T Consensus 203 ~~~wvy~vgP~~Ga~laa~~y~~l~~~ 229 (231)
T PRK05420 203 EQLWLFWVAPIVGAIIGGLIYRLLLEK 229 (231)
T ss_pred cceEEeehHHHHHHHHHHHHHHHHhcc
Confidence 689999999999999999998887654
No 28
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.28 E-value=4e-12 Score=113.64 Aligned_cols=100 Identities=24% Similarity=0.347 Sum_probs=83.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhhccCC----Ccccc--hhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhc-CCC
Q 023102 155 SDLQALIMEIVVTFSMMFVTSAVATDT----KAIGE--LAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASS-FYK 227 (287)
Q Consensus 155 s~~~~~~~E~~~Tf~l~~~~~~~~~~~----~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~-~~~ 227 (287)
...|.+++||++|++|++.-++.+.+. ...+. -..+.+|++++..+++++.+||+++|||.+|+..++++ .|.
T Consensus 30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~ 109 (316)
T KOG0224|consen 30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWK 109 (316)
T ss_pred HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChh
Confidence 357889999999999999877654321 12222 23589999999999999999999999999999999987 799
Q ss_pred ceeeeeehhhHHHHHHHHHHHHHhcCC
Q 023102 228 GIWVYLVGPVTGTFMGAWSYNMIRETD 254 (287)
Q Consensus 228 ~~wvy~~~P~lGa~la~~l~~~~~~~~ 254 (287)
.+.+|.++|++||++|+.....+|++.
T Consensus 110 k~p~Y~~aQ~iGAF~gaa~~y~~y~d~ 136 (316)
T KOG0224|consen 110 KFPVYVLAQFIGAFLGAATVYGLYYDA 136 (316)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998877776543
No 29
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.23 E-value=1.1e-11 Score=109.22 Aligned_cols=104 Identities=23% Similarity=0.303 Sum_probs=85.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccC----C--Ccc-c-chhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhc-CC
Q 023102 156 DLQALIMEIVVTFSMMFVTSAVATD----T--KAI-G-ELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASS-FY 226 (287)
Q Consensus 156 ~~~~~~~E~~~Tf~l~~~~~~~~~~----~--~~~-~-~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~-~~ 226 (287)
..+.++.|+++|++|++...+.... + ... . ....+.+|+.+...+++.+++||+++|||.+++.++.+. .|
T Consensus 4 ~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp~ 83 (241)
T COG0580 4 LTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFPW 83 (241)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCCH
Confidence 4567899999999999986654221 1 111 1 235789999999999999999999999999999999887 78
Q ss_pred CceeeeeehhhHHHHHHHHHHHHHhcCCCCCCC
Q 023102 227 KGIWVYLVGPVTGTFMGAWSYNMIRETDKPAHA 259 (287)
Q Consensus 227 ~~~wvy~~~P~lGa~la~~l~~~~~~~~~~~~~ 259 (287)
++...||++|++|+++|+.+...+++++..+.+
T Consensus 84 ~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~ 116 (241)
T COG0580 84 RKVLPYIVAQVLGAFAGAALLYLLYYGKILETE 116 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 999999999999999999998888877655444
No 30
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.19 E-value=1.1e-10 Score=102.92 Aligned_cols=97 Identities=28% Similarity=0.343 Sum_probs=80.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCC
Q 023102 37 PPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPW 116 (287)
Q Consensus 37 ~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~ 116 (287)
..+..+.++.|+++|++|+++.......++... .+. ..++.+|+.+.+..+..+..||+.+|||+++++.+.... |
T Consensus 131 ~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~~--~~~-~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~-~ 206 (227)
T PF00230_consen 131 GISLGQAFFSEFIGTFILVLVILAVADDKRKFP--LGP-LAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGI-W 206 (227)
T ss_dssp TSSHHHHHHHHHHHHHHHHHHHHHHTSTTSSST--SSG-GHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTH-H
T ss_pred cchhhhhhhhhhhhhhHHHhhhhhhcccccccc--ccc-ccceeEEEEEeecccccccccccccCchhhcCceeeccc-C
Confidence 456789999999999999998877665443322 111 368889999999999999999999999999999998875 8
Q ss_pred CcchhhhhhhhhHHHHHHHHH
Q 023102 117 KQVPIYAAAQLTGAVSASLTL 137 (287)
Q Consensus 117 ~~~~~yi~aQ~lGa~~g~~~~ 137 (287)
...|+||++|++|+++|++++
T Consensus 207 ~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 207 DYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp TTTTHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEehHHHHHHHHHhhC
Confidence 999999999999999999864
No 31
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=92.96 E-value=3.4 Score=37.33 Aligned_cols=137 Identities=14% Similarity=0.103 Sum_probs=70.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCC
Q 023102 38 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWK 117 (287)
Q Consensus 38 ~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 117 (287)
+.++++..+=++.++-+++......... ...+....+..++++++.+.+.+++.+..--+ |--........++++|+
T Consensus 29 ~~~l~ai~AG~~i~lg~~~~~~~~~~~~-~~~~~~~~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~~k~Is~~ 105 (265)
T COG2116 29 KLLLLAILAGAFIGLGFLFYITVGTGLP-GAPGGLAKLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVLSKKISWG 105 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCC-CCCcchHHHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHHhCCccHH
Confidence 4455666665555554444332211111 11112345566777777777777765554211 22222233556888988
Q ss_pred cchhhhhhhhhHHHHHHHHHHHHhc-Ccc---ccccc----------CCCCChHHHHHHHHHHHHHHHHHHHhh
Q 023102 118 QVPIYAAAQLTGAVSASLTLRVLLH-PIK---HIGTT----------SPSGSDLQALIMEIVVTFSMMFVTSAV 177 (287)
Q Consensus 118 ~~~~yi~aQ~lGa~~g~~~~~~~~~-~~~---~~~~~----------~~~~s~~~~~~~E~~~Tf~l~~~~~~~ 177 (287)
+.+--|.-=.+|=++|++++-+++. +.. ..+.. .-+.+..+.|+--.+|.++...++...
T Consensus 106 ~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~ 179 (265)
T COG2116 106 QLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANGQWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMS 179 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccccccccchhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 8776666555666666665554442 110 00000 012244666666677777777766654
No 32
>PRK11562 nitrite transporter NirC; Provisional
Probab=90.31 E-value=6.1 Score=35.85 Aligned_cols=98 Identities=9% Similarity=0.048 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHhcc-cCCccchHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHHHHhcCc---cc--ccc-
Q 023102 77 ASVAGGLIVTVMIYAVGHI-SGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPI---KH--IGT- 149 (287)
Q Consensus 77 ~~l~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~---~~--~~~- 149 (287)
.++.+++.+.+.++..+.. +| |=.......+.|+.++.+.+-.|.-=.+|=++|+++.-.++... .. .+.
T Consensus 61 ~g~~F~~GLilVi~~G~eLFTg---n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~~~ 137 (268)
T PRK11562 61 MGATFGIALTLVIIAGSELFTG---HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSI 137 (268)
T ss_pred HHHHHHHHHHHHHHhCcccccc---chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHH
Confidence 4445555555555554333 22 33333344567788887776666555555555555544433210 00 000
Q ss_pred ------cCCCCChHHHHHHHHHHHHHHHHHHHhh
Q 023102 150 ------TSPSGSDLQALIMEIVVTFSMMFVTSAV 177 (287)
Q Consensus 150 ------~~~~~s~~~~~~~E~~~Tf~l~~~~~~~ 177 (287)
..-..+..+.|+-=.+|.++..+.+...
T Consensus 138 ~~~ia~~K~~~~~~~~f~~gI~CNwLVclavw~~ 171 (268)
T PRK11562 138 VHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMA 171 (268)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0112356677777788888887776654
No 33
>PRK09713 focB putative formate transporter; Provisional
Probab=87.71 E-value=11 Score=34.38 Aligned_cols=100 Identities=12% Similarity=0.075 Sum_probs=51.7
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCCcchhhh----hhhhhHHHHHHHHHHHHhc--Cccc-c
Q 023102 75 LGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYA----AAQLTGAVSASLTLRVLLH--PIKH-I 147 (287)
Q Consensus 75 ~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi----~aQ~lGa~~g~~~~~~~~~--~~~~-~ 147 (287)
+..++.+.+.+.+.++..+..--+ |=...++ ...|+.+|++.+-.| ++-++|+++-+.+.+..-. ++.. .
T Consensus 68 ll~g~~F~vGLilIv~~g~ELfTg--N~~~~~~-~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~~~~~~ 144 (282)
T PRK09713 68 LVGGLCFTLGFILLAVCGTSLFTS--SVMTVMA-KSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAMW 144 (282)
T ss_pred HHHHHHHHHHHHHHHHhCccccHH--HHHHHHH-HHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhH
Confidence 344555666666666554443212 2122222 457788877776443 4555555555554432111 0000 0
Q ss_pred c-------ccCCCCChHHHHHHHHHHHHHHHHHHHhh
Q 023102 148 G-------TTSPSGSDLQALIMEIVVTFSMMFVTSAV 177 (287)
Q Consensus 148 ~-------~~~~~~s~~~~~~~E~~~Tf~l~~~~~~~ 177 (287)
+ ...-+.+..+.|+--.+|.++..+.+...
T Consensus 145 ~~~~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV~~~ 181 (282)
T PRK09713 145 GVAVLHCAEGKMHHTFTESVSLGIMCNLMVCLALWMS 181 (282)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00113467788888888888888877643
No 34
>PRK10805 formate transporter; Provisional
Probab=85.90 E-value=28 Score=31.87 Aligned_cols=98 Identities=13% Similarity=0.141 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHHHHHHHHhcc-cCCccchHHHHHHHHhhCCCCCcchhhhh----hhhhHHHHHHHHHHHHhcC---ccc
Q 023102 75 LGASVAGGLIVTVMIYAVGHI-SGAHMNPAVTLAFAAVRHFPWKQVPIYAA----AQLTGAVSASLTLRVLLHP---IKH 146 (287)
Q Consensus 75 ~~~~l~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~----aQ~lGa~~g~~~~~~~~~~---~~~ 146 (287)
+..++.+.+.+.+.++.-+.. +| |--.+++ .+.||.++.+.+-.|. +-++|+++-+.+.+..-.. ...
T Consensus 69 ll~~~~F~vGlilIvl~g~eLFTg---n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~ 144 (285)
T PRK10805 69 LVGGICFSLGLILCVVCGADLFTS---TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQ 144 (285)
T ss_pred HHHHHHHHHHHHHHHHhCcccchh---hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccH
Confidence 344555656665566554444 33 5554444 5678888888764444 4555555544443321100 000
Q ss_pred cc-------ccCCCCChHHHHHHHHHHHHHHHHHHHh
Q 023102 147 IG-------TTSPSGSDLQALIMEIVVTFSMMFVTSA 176 (287)
Q Consensus 147 ~~-------~~~~~~s~~~~~~~E~~~Tf~l~~~~~~ 176 (287)
.+ ...-+.+..+.|+-=.+|.++..+.+..
T Consensus 145 ~~~~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~ 181 (285)
T PRK10805 145 WGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWM 181 (285)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0011246677777778888888777764
No 35
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=83.99 E-value=6.8 Score=35.08 Aligned_cols=104 Identities=12% Similarity=0.093 Sum_probs=59.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHHHHhcCccccc---
Q 023102 72 VSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIG--- 148 (287)
Q Consensus 72 ~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~--- 148 (287)
...+..++.+++.+...++.-+..- .=|-.......+.|+.+|.+.+--|.-=.+|=++|+++.-.+........
T Consensus 55 ~~~l~~g~~F~~Gl~lIv~~g~eLf--Tgn~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~ 132 (250)
T PF01226_consen 55 LAKLVGGLVFPIGLVLIVFLGGELF--TGNMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSP 132 (250)
T ss_dssp HHHHHHHHHHTHHHHHHHHHT---T--TTTCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTT
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhc--ccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccH
Confidence 3344556666666666666654442 22555555566778888888766666555566666655554443111110
Q ss_pred ----------ccCCCCChHHHHHHHHHHHHHHHHHHHhh
Q 023102 149 ----------TTSPSGSDLQALIMEIVVTFSMMFVTSAV 177 (287)
Q Consensus 149 ----------~~~~~~s~~~~~~~E~~~Tf~l~~~~~~~ 177 (287)
...-+.+..+.|+.=.+|.++..+.+...
T Consensus 133 ~~~~~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~ 171 (250)
T PF01226_consen 133 AMGEYLISVAEHKVSHTFWELFFRGILCNWLVCLAVWLA 171 (250)
T ss_dssp HHHHHHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 01123367778888888888888887765
No 36
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=62.33 E-value=1.8e+02 Score=29.32 Aligned_cols=112 Identities=21% Similarity=0.229 Sum_probs=61.3
Q ss_pred hCCCCCcchhhhhhhhhHHHHHHHHHHHHhcCcccccccCCCCChHHHHHHHHHHHHHHHHHHHhhccCCCcccchhHHH
Q 023102 112 RHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIA 191 (287)
Q Consensus 112 g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~~~~~~~~~ 191 (287)
..-+.....-++.+.++|+.+|.+..+.+++.-. .+ .++...+...++..+....+ +......
T Consensus 382 ~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~~~----------~f----~~L~l~l~~~l~~~~~~~~~---p~~~~~g 444 (650)
T PF04632_consen 382 LDNPAPALRLFLIGALLGAVLAFLYLFFVLPHLD----------GF----PLLALVLAPFLFLGGLLMAR---PRTAYIG 444 (650)
T ss_pred CcChHHHHHHHHHHHHHHHHHHHHHHHHhhhccC----------cH----HHHHHHHHHHHHHHHHHHcC---chHHHHH
Confidence 3346677788888999999999998888774221 11 11111111111111111111 2334444
Q ss_pred HHHHHHHHHHhccCCCccccchhhhHHHHHhhcCCCceeeeeehhhHHHHHHHHHHHHHhcCC
Q 023102 192 VGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRETD 254 (287)
Q Consensus 192 ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~~wvy~~~P~lGa~la~~l~~~~~~~~ 254 (287)
.++.+.+..... .......|++..+-.. ++-++|.+++.+.|+++.+..
T Consensus 445 ~~~~v~f~~~~~-~~n~~~~d~~~f~n~~-------------la~l~G~~~a~l~~~li~p~~ 493 (650)
T PF04632_consen 445 LGFAVFFLLLLG-PGNPYSYDFATFLNRA-------------LAILLGIVIAALVFRLIRPFS 493 (650)
T ss_pred HHHHHHHHHHhc-CCCCCCCCHHHHHHHH-------------HHHHHHHHHHHHHHHHHCCCC
Confidence 555444443332 2234456666554433 367899999999999987544
No 37
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=51.58 E-value=1.7e+02 Score=25.82 Aligned_cols=76 Identities=12% Similarity=0.157 Sum_probs=41.4
Q ss_pred chHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHHHHhc-------Cccccc-------ccCCCCChHHHHHHHHHH
Q 023102 101 NPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLH-------PIKHIG-------TTSPSGSDLQALIMEIVV 166 (287)
Q Consensus 101 NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~-------~~~~~~-------~~~~~~s~~~~~~~E~~~ 166 (287)
|-.......+.||.+|.+.+-.|.-=.+|=++|+++.-.+.. +..... ...-+.+..+.++.=+++
T Consensus 68 n~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gilc 147 (239)
T TIGR00790 68 NTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANGPWGVGSLAIAEHKAHHTFVEAFFLGILC 147 (239)
T ss_pred chHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 433333345678888888776665555555555555544332 110000 011123666777777788
Q ss_pred HHHHHHHHHh
Q 023102 167 TFSMMFVTSA 176 (287)
Q Consensus 167 Tf~l~~~~~~ 176 (287)
.+++.+.+..
T Consensus 148 n~lV~lav~~ 157 (239)
T TIGR00790 148 NWLVCLAVWM 157 (239)
T ss_pred HHHHHHHHHH
Confidence 8888777654
No 38
>PF10710 DUF2512: Protein of unknown function (DUF2512); InterPro: IPR019649 Proteins in this entry are predicted to be integral membrane proteins, and many of them are annotated as being YndM protein. They are all found in Firmicutes. The true function is not known.
Probab=49.59 E-value=1.4e+02 Score=24.21 Aligned_cols=64 Identities=16% Similarity=0.294 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCCCcccchhHHHHHHHHHHHHHhcc-----CCCccccchhhhHHHHHh
Q 023102 156 DLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAG-----PVSGGSMNPARTVGPAIA 222 (287)
Q Consensus 156 ~~~~~~~E~~~Tf~l~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~-----~~sG~~lNPAr~~g~a~~ 222 (287)
+..+++.-++.+++....++..-.+- +....+.+++.+.+..+..| +.+|-..=-..|++.+..
T Consensus 3 hv~aLliKf~~~~ivl~i~L~~~~~~---sf~~~l~~sl~ltvvaY~iGDl~ILPr~gN~~AtiaD~~La~~ 71 (136)
T PF10710_consen 3 HVKALLIKFVMTIIVLYIILGLFFGA---SFGDILLISLVLTVVAYLIGDLFILPRTGNIVATIADFGLAFL 71 (136)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHheeeCCCChhHHHHHHHHHHH
Confidence 45678888888888887777642221 23455666666666666554 445544444455555554
No 39
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=39.11 E-value=89 Score=29.09 Aligned_cols=48 Identities=27% Similarity=0.465 Sum_probs=36.8
Q ss_pred ccccchhhhHHHHHhh--------cCCCceee-eeehhhHHHHHHHHHHHHHhcCCC
Q 023102 208 GGSMNPARTVGPAIAS--------SFYKGIWV-YLVGPVTGTFMGAWSYNMIRETDK 255 (287)
Q Consensus 208 G~~lNPAr~~g~a~~~--------~~~~~~wv-y~~~P~lGa~la~~l~~~~~~~~~ 255 (287)
+-.+.|-..|++.... .++++||. =+.|-++|+++|..+|+.+.....
T Consensus 210 ~rllr~~l~f~~l~~A~~v~lSRV~DYkHHwsDV~aG~liG~~~A~~~~~~v~~~f~ 266 (317)
T KOG3030|consen 210 GRLLRPLLQFLPLMLALLVGLSRVSDYKHHWSDVLAGALIGAFVAYFLYRYVFPNFK 266 (317)
T ss_pred chhHHHHHHHHHHHHHHHHeeehhcccccccHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 4556787777776654 37888997 567889999999999999875544
No 40
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=34.34 E-value=15 Score=28.66 Aligned_cols=19 Identities=32% Similarity=0.319 Sum_probs=16.8
Q ss_pred ccCCccchHHHHHHHHhhC
Q 023102 95 ISGAHMNPAVTLAFAAVRH 113 (287)
Q Consensus 95 iSGah~NPavTla~~l~g~ 113 (287)
=|+||+||.+.++-.+..+
T Consensus 7 Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 7 GTRGHVYPFLALARALRRR 25 (139)
T ss_dssp SSHHHHHHHHHHHHHHHHT
T ss_pred CChhHHHHHHHHHHHHhcc
Confidence 3789999999999999865
No 41
>PF12811 BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539 Bax inhibitor-1 (BI1) family contains six known genes in human. Some members of BI1 family have been proved to play important roles in cell death [, ].
Probab=34.30 E-value=3.6e+02 Score=24.56 Aligned_cols=45 Identities=11% Similarity=-0.009 Sum_probs=25.3
Q ss_pred Ccc-chHHHHHHHHhh-----CCCCCc------chhhhhhhhhHHHHHHHHHHHHhc
Q 023102 98 AHM-NPAVTLAFAAVR-----HFPWKQ------VPIYAAAQLTGAVSASLTLRVLLH 142 (287)
Q Consensus 98 ah~-NPavTla~~l~g-----~~~~~~------~~~yi~aQ~lGa~~g~~~~~~~~~ 142 (287)
-+. ||+..+.+++.. .++..- ...-++.|.+-+-++....-....
T Consensus 109 ~~~~sp~l~~~YA~~EG~flG~iS~~f~~~~~~~~pGIv~qAvl~T~~vf~~ml~lY 165 (274)
T PF12811_consen 109 RKVWSPALAPIYAVLEGVFLGGISAVFENIYYSRYPGIVFQAVLGTFGVFAVMLALY 165 (274)
T ss_pred CccCChHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 455 899988887764 333211 113367776666665555544443
No 42
>PRK10631 p-hydroxybenzoic acid efflux subunit AaeB; Provisional
Probab=26.35 E-value=7.3e+02 Score=25.59 Aligned_cols=124 Identities=14% Similarity=0.149 Sum_probs=66.7
Q ss_pred CccchHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHHHHhcCcccccccCCCCChHHHHHHHHHHHHHHHHHHHhh
Q 023102 98 AHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAV 177 (287)
Q Consensus 98 ah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~Tf~l~~~~~~~ 177 (287)
+-+..||..+++..---+.....-+..++++|..+|.+....+++.... + . .+++=.++.++ .+.+.
T Consensus 381 a~~~aAV~~~LfA~~~nP~~~~~~fl~Gtl~a~~~a~l~~f~vLP~i~~-~--------f-~lL~laLap~~---~~~g~ 447 (652)
T PRK10631 381 AMVMIAVVTSLAMRLPNPRMVAIDFLYGTLAALPLGALYFMVIIPNTQQ-S--------M-LLLCISLGVLG---FFIGI 447 (652)
T ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-c--------H-HHHHHHHHHHH---HHHHH
Confidence 4567777776666555455556778888889999998888777642110 0 0 11111122222 11221
Q ss_pred ccCCCcccchhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcCCCceeeeeehhhHHHHHHHHHHHHHhcC
Q 023102 178 ATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRET 253 (287)
Q Consensus 178 ~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~~wvy~~~P~lGa~la~~l~~~~~~~ 253 (287)
-. ++. ....+|+.+....+..-. .-...||+.-+-.+ ++.++|.+++.+.|.++.+.
T Consensus 448 ~~-~~~----~~~~lg~~i~f~~~l~l~-n~~~~d~~~FlN~a-------------lA~v~Gi~~A~l~f~lirp~ 504 (652)
T PRK10631 448 EV-QKR----RLGSLGALASTINILVLD-NPMTFHFSQFLDSA-------------LGQIVGCFLALIVILLVRDN 504 (652)
T ss_pred Hh-ccc----HHHHHHHHHHHHHHhccC-CCCCcCHHHHHHHH-------------HHHHHHHHHHHHHHHHhCCC
Confidence 11 111 122456665555433322 23345665554444 36788999999998766533
No 43
>PF01384 PHO4: Phosphate transporter family; InterPro: IPR001204 The PHO-4 family of transporters includes the phosphate-repressible phosphate permease (PHO-4) from Neurospora crassa which is probably a sodium-phosphate symporter []. This family also includes the human leukemia virus receptor.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate ion transport, 0016020 membrane
Probab=26.30 E-value=5.3e+02 Score=23.91 Aligned_cols=56 Identities=14% Similarity=0.233 Sum_probs=32.7
Q ss_pred hhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcCCCceeeeeehhhHHHHHHHHHHHHHhcC
Q 023102 187 LAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRET 253 (287)
Q Consensus 187 ~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~~wvy~~~P~lGa~la~~l~~~~~~~ 253 (287)
.....+|..+.+.....+ -..+|....+..-+ -..++.|++|.+++..+|+++...
T Consensus 92 tThalvGal~G~~l~~~g---~~~v~w~~~~~~I~--------~~wv~sPlia~~~a~~l~~~~~~~ 147 (326)
T PF01384_consen 92 TTHALVGALIGAGLASGG---FSAVNWSKGLLKIV--------LSWVISPLIAFILAYILYRLIRRI 147 (326)
T ss_pred HHHHHHHHHHHHHHHHhh---hhhchHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556665555544332 13456652222222 123578999999999999988643
No 44
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=22.65 E-value=21 Score=33.45 Aligned_cols=25 Identities=20% Similarity=0.218 Sum_probs=0.0
Q ss_pred HHHHhcccCCccchHHHHHHHHhhC
Q 023102 89 IYAVGHISGAHMNPAVTLAFAAVRH 113 (287)
Q Consensus 89 i~~~~~iSGah~NPavTla~~l~g~ 113 (287)
+...+.-||||+.||+.++-.+..+
T Consensus 4 i~~~~GGTGGHi~Pala~a~~l~~~ 28 (352)
T PRK12446 4 IVFTGGGSAGHVTPNLAIIPYLKED 28 (352)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHhC
No 45
>PRK15071 lipopolysaccharide ABC transporter permease; Provisional
Probab=20.04 E-value=2.5e+02 Score=25.96 Aligned_cols=60 Identities=8% Similarity=0.059 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhccc-CCccchHHH
Q 023102 46 AEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHIS-GAHMNPAVT 105 (287)
Q Consensus 46 ~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iS-Gah~NPavT 105 (287)
+-=+.++++++++...+......++....+..++.+|+.+.+....+...+ .++++|.+.
T Consensus 276 a~Pl~~~~~~lla~~~~~~~~R~~~~~~~i~~~i~~~~~y~~~~~~~~~lg~~g~l~P~la 336 (356)
T PRK15071 276 FQPLSVAVMMLMALSFIFGPLRSVTMGARVVTGISFGFVFYVSNEIFGPLSLVYGIPPIIG 336 (356)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHH
Confidence 334556666666655543322222112223345555555555554544443 466777553
Done!