Query 023102
Match_columns 287
No_of_seqs 182 out of 1433
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 16:23:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023102.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023102hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyz_A Aquaporin-4; water tran 100.0 4.5E-53 1.6E-57 386.5 21.4 256 32-287 43-309 (340)
2 2zz9_A Aquaporin-4; water tran 100.0 7.2E-51 2.5E-55 368.9 21.0 225 31-255 3-234 (301)
3 2b6o_A Aquaporin-0, lens fiber 100.0 9.2E-50 3.1E-54 357.0 20.5 220 33-255 2-227 (263)
4 1j4n_A Aquaporin 1; membrane p 100.0 2.5E-50 8.5E-55 362.2 16.2 223 33-255 3-237 (271)
5 2w2e_A AQY1, aquaporin, aquapo 100.0 2.1E-49 7E-54 357.0 22.2 218 38-256 42-269 (279)
6 3gd8_A Aquaporin-4; proton exc 100.0 1.8E-49 6.3E-54 347.3 20.0 215 39-253 2-223 (223)
7 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 1.3E-49 4.5E-54 356.2 18.1 221 33-255 4-230 (266)
8 3llq_A Aquaporin Z 2; aquapori 100.0 3.5E-49 1.2E-53 350.7 18.3 215 36-251 25-253 (256)
9 1ldf_A Glycerol uptake facilit 100.0 2.8E-49 9.7E-54 357.4 17.1 223 36-258 3-262 (281)
10 2o9g_A Aquaporin Z; integral m 100.0 7E-49 2.4E-53 346.1 18.9 214 39-253 3-232 (234)
11 3cn5_A Aquaporin; membrane pro 100.0 3.4E-49 1.2E-53 358.7 15.8 222 32-254 52-290 (304)
12 2f2b_A Aquaporin AQPM; protein 100.0 8E-47 2.7E-51 335.5 20.3 214 39-252 3-245 (246)
13 3c02_A Aquaglyceroporin; membr 100.0 6.8E-48 2.3E-52 344.4 12.5 221 36-257 5-248 (258)
14 2f2b_A Aquaporin AQPM; protein 99.6 4.5E-15 1.5E-19 131.3 11.3 101 37-142 140-245 (246)
15 2b6o_A Aquaporin-0, lens fiber 99.4 9.7E-13 3.3E-17 117.3 12.1 100 39-143 126-225 (263)
16 3gd8_A Aquaporin-4; proton exc 99.4 1.5E-12 5.1E-17 113.4 11.6 99 39-142 124-222 (223)
17 3d9s_A Aquaporin-5, AQP-5; aqu 99.4 1.5E-12 5E-17 116.2 11.8 101 38-143 127-228 (266)
18 2o9g_A Aquaporin Z; integral m 99.4 9.1E-13 3.1E-17 115.6 9.7 101 37-143 131-232 (234)
19 3llq_A Aquaporin Z 2; aquapori 99.4 7.4E-13 2.5E-17 117.3 9.1 98 38-141 155-253 (256)
20 3iyz_A Aquaporin-4; water tran 99.4 1.4E-12 4.9E-17 119.2 11.1 102 38-144 171-272 (340)
21 2w2e_A AQY1, aquaporin, aquapo 99.4 2.2E-12 7.4E-17 115.8 11.9 100 38-142 166-265 (279)
22 2zz9_A Aquaporin-4; water tran 99.4 1.7E-12 5.9E-17 117.4 10.9 101 38-143 132-232 (301)
23 3cn5_A Aquaporin; membrane pro 99.4 4.9E-13 1.7E-17 121.2 6.8 106 38-143 182-289 (304)
24 1j4n_A Aquaporin 1; membrane p 99.3 4.6E-12 1.6E-16 113.3 10.0 99 40-143 137-235 (271)
25 1ldf_A Glycerol uptake facilit 99.3 9.2E-12 3.1E-16 112.0 10.3 103 38-143 143-257 (281)
26 3c02_A Aquaglyceroporin; membr 99.3 1.9E-12 6.6E-17 115.1 5.3 100 155-254 8-113 (258)
27 3kcu_A Probable formate transp 88.8 12 0.0004 33.0 14.1 101 74-177 68-182 (285)
28 3kly_A Putative formate transp 79.9 7 0.00024 34.4 8.4 100 74-177 67-181 (280)
29 4fc4_A Nitrite transporter NIR 44.5 1.5E+02 0.0052 25.4 12.7 101 74-177 58-171 (261)
30 3tds_E Formate/nitrite transpo 41.3 1.7E+02 0.0058 25.2 9.6 104 72-177 62-177 (268)
31 3s2u_A UDP-N-acetylglucosamine 33.7 10 0.00034 34.1 0.4 20 94-113 10-29 (365)
No 1
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=4.5e-53 Score=386.53 Aligned_cols=256 Identities=26% Similarity=0.422 Sum_probs=209.5
Q ss_pred ccCCCChhHHHHHHHHHHHHHHHHHHHHhHhhcccc--cccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHH
Q 023102 32 WNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAY--DEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFA 109 (287)
Q Consensus 32 ~~~~~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~--~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~ 109 (287)
.++.++.+++|++++||+|||+|+|+++++++.... .....+++.+++++|+++++.+++++++||||+|||||++++
T Consensus 43 ~~~~~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~ 122 (340)
T 3iyz_A 43 FKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMV 122 (340)
T ss_pred hhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHH
Confidence 355677899999999999999999999998774321 122356778999999999999999999999999999999999
Q ss_pred HhhCCCCCcchhhhhhhhhHHHHHHHHHHHHhcCcc--cccccC--CCCChHHHHHHHHHHHHHHHHHHHhhccCCCc-c
Q 023102 110 AVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIK--HIGTTS--PSGSDLQALIMEIVVTFSMMFVTSAVATDTKA-I 184 (287)
Q Consensus 110 l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--~~~~~~--~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~-~ 184 (287)
+.|+++|.+++.|+++|++||++|+++++.++++.. ..+.+. +..+..++++.|+++||+|+++++.+..+++. .
T Consensus 123 l~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~ 202 (340)
T 3iyz_A 123 CTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDV 202 (340)
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCccCCc
Confidence 999999999999999999999999999999886432 223332 34578899999999999999999987544433 2
Q ss_pred cchhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcCCCceeeeeehhhHHHHHHHHHHHHHhcCCCCCCCC----
Q 023102 185 GELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRETDKPAHAI---- 260 (287)
Q Consensus 185 ~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~~wvy~~~P~lGa~la~~l~~~~~~~~~~~~~~---- 260 (287)
....|+.||+++.+.++.++++||++|||||+|||+++.++|.++||||+||++|+++|+++|++++.++.+.++.
T Consensus 203 ~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~~p~~~~~~r~~~~ 282 (340)
T 3iyz_A 203 TGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEA 282 (340)
T ss_pred ccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHhCCChhhhHHHHHh
Confidence 4578999999998888888899999999999999999999999999999999999999999999998765442221
Q ss_pred CCCCcchhhhhccCccccCCCCCCCCC
Q 023102 261 SPGSLSFKLRRLKSNEQAHNNDPLDAL 287 (287)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~e~~~~ 287 (287)
.++..+..+.++++.++.+++.|.|||
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (340)
T 3iyz_A 283 FSKAAQQTKGSYMEVEDNRSQVETEDL 309 (340)
T ss_pred hcCcccccccchhhhhcccccchhhhh
Confidence 122223334666666666666666654
No 2
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=7.2e-51 Score=368.95 Aligned_cols=225 Identities=29% Similarity=0.491 Sum_probs=190.0
Q ss_pred cccCCCChhHHHHHHHHHHHHHHHHHHHHhHhhcccc--cccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHH
Q 023102 31 VWNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAY--DEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAF 108 (287)
Q Consensus 31 ~~~~~~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~--~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~ 108 (287)
..+|..+.+++|++++||+|||+|+++++++.+.... .....+++.+++++|+++++.+++++++||||+|||||+++
T Consensus 3 ~~~~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~ 82 (301)
T 2zz9_A 3 AFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAM 82 (301)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHH
Confidence 3467888999999999999999999999998764322 12235677899999999999999999999999999999999
Q ss_pred HHhhCCCCCcchhhhhhhhhHHHHHHHHHHHHhcCccc--ccccC--CCCChHHHHHHHHHHHHHHHHHHHhhccCCCc-
Q 023102 109 AAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKH--IGTTS--PSGSDLQALIMEIVVTFSMMFVTSAVATDTKA- 183 (287)
Q Consensus 109 ~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~--~~~~~--~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~- 183 (287)
++.|+++|.+++.|+++|++||++|+++++.++++... .+.+. +..+..++++.|+++||+|+++++.+..+++.
T Consensus 83 ~~~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~ 162 (301)
T 2zz9_A 83 VCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTD 162 (301)
T ss_dssp HHTSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSC
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999875322 22232 34478899999999999999999987544333
Q ss_pred ccchhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcCCCceeeeeehhhHHHHHHHHHHHHHhcCCC
Q 023102 184 IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRETDK 255 (287)
Q Consensus 184 ~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~~wvy~~~P~lGa~la~~l~~~~~~~~~ 255 (287)
...+.|+.||+++.+.++.++++||++|||||+|||+++.+.|.++|+||+||++|+++|+++|++++.++.
T Consensus 163 ~~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~~w~~~WVy~vgPiiGailaa~ly~~l~~~~~ 234 (301)
T 2zz9_A 163 VTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDV 234 (301)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC---
T ss_pred ccchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhCCCcceeeeeeHHHHHHHHHHHHHHHHhCCch
Confidence 245789999999988888888899999999999999999999999999999999999999999999986543
No 3
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=9.2e-50 Score=357.04 Aligned_cols=220 Identities=32% Similarity=0.458 Sum_probs=191.0
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhh
Q 023102 33 NEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVR 112 (287)
Q Consensus 33 ~~~~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g 112 (287)
+|.++.+++|++++||+|||+|+++++++.... .+...+++.+++++|+++++.+++++++||+|+|||||+++++.|
T Consensus 2 ~e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~--~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g 79 (263)
T 2b6o_A 2 WELRSASFWRAIFAEFFATLFYVFFGLGASLRW--APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGS 79 (263)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC--CSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTT
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhc
Confidence 356778899999999999999999999887543 222345678999999999999999999999999999999999999
Q ss_pred CCCCCcchhhhhhhhhHHHHHHHHHHHHhcCcc--cccc--cCCCCChHHHHHHHHHHHHHHHHHHHhhccCCCc--ccc
Q 023102 113 HFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIK--HIGT--TSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKA--IGE 186 (287)
Q Consensus 113 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--~~~~--~~~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~--~~~ 186 (287)
+++|.+++.|+++|++|+++|+.+++.++++.. ..+. +.|..+..++++.|+++||+|+++++.+ .|+++ ...
T Consensus 80 ~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~~~~~~ 158 (263)
T 2b6o_A 80 QMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFAT-YDERRNGRLG 158 (263)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-SCTTSCSSCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccCCCCcc
Confidence 999999999999999999999999999987432 2232 2345578999999999999999999987 44332 346
Q ss_pred hhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcCCCceeeeeehhhHHHHHHHHHHHHHhcCCC
Q 023102 187 LAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRETDK 255 (287)
Q Consensus 187 ~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~~wvy~~~P~lGa~la~~l~~~~~~~~~ 255 (287)
+.|+.||+++.+.++.++++||++|||||+|||+++.++|+++|+||+||++|+++|+++|++++.++.
T Consensus 159 ~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 227 (263)
T 2b6o_A 159 SVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRL 227 (263)
T ss_dssp CHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcCCccceeHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 889999999999999999999999999999999999999999999999999999999999999986543
No 4
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=2.5e-50 Score=362.19 Aligned_cols=223 Identities=29% Similarity=0.460 Sum_probs=190.6
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHhHhhccc-------ccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHH
Q 023102 33 NEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSA-------YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVT 105 (287)
Q Consensus 33 ~~~~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~-------~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavT 105 (287)
+|..+++++|++++||+|||+|+|+++++..... ..+...+++.+++++|+++++.+++++++||||+|||||
T Consensus 3 ~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVT 82 (271)
T 1j4n_A 3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVT 82 (271)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHH
Confidence 4667788999999999999999999998776321 111123577899999999999999999999999999999
Q ss_pred HHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHHHHhcCc--ccccc--cCCCCChHHHHHHHHHHHHHHHHHHHhhccCC
Q 023102 106 LAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPI--KHIGT--TSPSGSDLQALIMEIVVTFSMMFVTSAVATDT 181 (287)
Q Consensus 106 la~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~--~~~~~--~~~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~ 181 (287)
+++++.|+++|.+++.|+++|++||++|+.+++.++++. ...+. +.|..+..++++.|+++||+|+++++....++
T Consensus 83 la~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~ 162 (271)
T 1j4n_A 83 LGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRR 162 (271)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTCSS
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 999999999999999999999999999999999998632 22222 33455678899999999999999999874333
Q ss_pred Cc-ccchhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcCCCceeeeeehhhHHHHHHHHHHHHHhcCCC
Q 023102 182 KA-IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRETDK 255 (287)
Q Consensus 182 ~~-~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~~wvy~~~P~lGa~la~~l~~~~~~~~~ 255 (287)
+. ...+.|+.||+++.+.++.++++||++|||||+|||+++.++|+++|+||+||++|+++|+++|++++.++.
T Consensus 163 ~~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 163 RRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred CCCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhCCCcceeHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 32 246889999999998888888899999999999999999999999999999999999999999999986554
No 5
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=2.1e-49 Score=356.96 Aligned_cols=218 Identities=22% Similarity=0.326 Sum_probs=189.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhc--cc-----ccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHH
Q 023102 38 PGFLRKVIAEIIATYLLVFVTCGSAAL--SA-----YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAA 110 (287)
Q Consensus 38 ~~~~~~~~~Ef~gTf~lv~~~~~~~~~--~~-----~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l 110 (287)
++.+|++++||+|||+|+|+++++... .. ......+++.+++++|+++++.+++++++||||+|||||+++++
T Consensus 42 ~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~ 121 (279)
T 2w2e_A 42 RNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVL 121 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHH
Confidence 467899999999999999999886421 11 11123456789999999999999999999999999999999999
Q ss_pred hhCCCCCcchhhhhhhhhHHHHHHHHHHHHhcCcccccccCC--CCChHHHHHHHHHHHHHHHHHHHhhccCCCcccchh
Q 023102 111 VRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSP--SGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELA 188 (287)
Q Consensus 111 ~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~--~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~~~~~~ 188 (287)
.|+++|.+++.|+++|++||++|+++++.+++..... .+.| ..+..++++.|+++||+|+++++.+..++++...+.
T Consensus 122 ~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~-~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~~~~~~ 200 (279)
T 2w2e_A 122 ARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIAF-ANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRATWFA 200 (279)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCC-SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCSTTGGGH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccee-eccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCcH
Confidence 9999999999999999999999999999998654433 3444 347889999999999999999998866666556789
Q ss_pred HHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcCC-CceeeeeehhhHHHHHHHHHHHHHhcCCCC
Q 023102 189 GIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFY-KGIWVYLVGPVTGTFMGAWSYNMIRETDKP 256 (287)
Q Consensus 189 ~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~-~~~wvy~~~P~lGa~la~~l~~~~~~~~~~ 256 (287)
|+.||+++.+.++.+++.||++|||||+|||+++.+.| .++||||+||++|+++|+++|+++...+.+
T Consensus 201 pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~~ 269 (279)
T 2w2e_A 201 PFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNYQ 269 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 99999999999999999999999999999999998755 689999999999999999999999866654
No 6
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-49 Score=347.28 Aligned_cols=215 Identities=30% Similarity=0.480 Sum_probs=186.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhccc--ccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCC
Q 023102 39 GFLRKVIAEIIATYLLVFVTCGSAALSA--YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPW 116 (287)
Q Consensus 39 ~~~~~~~~Ef~gTf~lv~~~~~~~~~~~--~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~ 116 (287)
+++|++++||+|||+|+++++++..... ......+++.+++++|+++++.+++++++||+|+|||||+++++.|+++|
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 81 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCH
Confidence 5799999999999999999999876432 12234567889999999999999999999999999999999999999999
Q ss_pred CcchhhhhhhhhHHHHHHHHHHHHhcCcc--ccccc--CCCCChHHHHHHHHHHHHHHHHHHHhhccCCCcc-cchhHHH
Q 023102 117 KQVPIYAAAQLTGAVSASLTLRVLLHPIK--HIGTT--SPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAI-GELAGIA 191 (287)
Q Consensus 117 ~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--~~~~~--~~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~~-~~~~~~~ 191 (287)
.+++.|+++|++|+++|+.+++.+++++. ..+.+ .|..+..++++.|+++||+|+++++...++++.. ....|+.
T Consensus 82 ~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~pl~ 161 (223)
T 3gd8_A 82 AKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALA 161 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSCCCSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCCccCCccHH
Confidence 99999999999999999999999886321 22332 3455888999999999999999999875444332 4578999
Q ss_pred HHHHHHHHHHhccCCCccccchhhhHHHHHhhcCCCceeeeeehhhHHHHHHHHHHHHHhcC
Q 023102 192 VGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRET 253 (287)
Q Consensus 192 ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~~wvy~~~P~lGa~la~~l~~~~~~~ 253 (287)
||+++...+..+++.||++|||||||||+++.++|+++|+||+||++|+++|+++|++++.+
T Consensus 162 iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 162 IGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhccCCccccccHHHHHHHHHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 99999888888888899999999999999999999999999999999999999999998743
No 7
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-49 Score=356.21 Aligned_cols=221 Identities=28% Similarity=0.431 Sum_probs=192.2
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhh
Q 023102 33 NEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVR 112 (287)
Q Consensus 33 ~~~~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g 112 (287)
+|..+.+++|++++||+|||+|+|+++++...... ...+++.+++++|+++++.+++++++||||+|||||+++++.|
T Consensus 4 ~e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~~~--~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g 81 (266)
T 3d9s_A 4 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPS--ALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGN 81 (266)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCCSS--SCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTS
T ss_pred hhhhChHHHHHHHHHHHHHHHHHHHHHHHHhCCCC--CCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhc
Confidence 35678899999999999999999999998753222 2356778999999999999999999999999999999999999
Q ss_pred CCCCCcchhhhhhhhhHHHHHHHHHHHHhcCc--ccccccCC--CCChHHHHHHHHHHHHHHHHHHHhhccCCCc-ccch
Q 023102 113 HFPWKQVPIYAAAQLTGAVSASLTLRVLLHPI--KHIGTTSP--SGSDLQALIMEIVVTFSMMFVTSAVATDTKA-IGEL 187 (287)
Q Consensus 113 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~--~~~~~~~~--~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~-~~~~ 187 (287)
+++|.+++.|+++|++||++|+.+++.+++++ ...+.+.+ ..+..++++.|+++||+|+++++.+.++++. ...+
T Consensus 82 ~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~ 161 (266)
T 3d9s_A 82 QISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGS 161 (266)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCCSCCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCccch
Confidence 99999999999999999999999999998642 12333333 4478899999999999999999987432332 2467
Q ss_pred hHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcCCCc-eeeeeehhhHHHHHHHHHHHHHhcCCC
Q 023102 188 AGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKG-IWVYLVGPVTGTFMGAWSYNMIRETDK 255 (287)
Q Consensus 188 ~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~~~~-~wvy~~~P~lGa~la~~l~~~~~~~~~ 255 (287)
.|+.||+++.+.++.++++||++|||||+|||+++.++|++ +||||+||++|+++|+++|++++.++.
T Consensus 162 ~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 230 (266)
T 3d9s_A 162 PALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNS 230 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCCS
T ss_pred HHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcCCcccCEeeeehHHHHHHHHHHHHHHHHhCCCc
Confidence 89999999999999999999999999999999999999999 999999999999999999999986543
No 8
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=3.5e-49 Score=350.68 Aligned_cols=215 Identities=33% Similarity=0.515 Sum_probs=185.3
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhHhhcccc-cccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCC
Q 023102 36 YPPGFLRKVIAEIIATYLLVFVTCGSAALSAY-DEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHF 114 (287)
Q Consensus 36 ~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~-~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~ 114 (287)
-+++++|++++||+|||+|+++++++...... .+...+++.+++++|+++++.+++++++||||+|||||+++++.|++
T Consensus 25 ~~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~ 104 (256)
T 3llq_A 25 QSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRF 104 (256)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCC
Confidence 34678999999999999999999998754322 22345678899999999999999999999999999999999999999
Q ss_pred CCCcchhhhhhhhhHHHHHHHHHHHHhcCcc----------cccccCCC-CChHHHHHHHHHHHHHHHHHHHhhccCCCc
Q 023102 115 PWKQVPIYAAAQLTGAVSASLTLRVLLHPIK----------HIGTTSPS-GSDLQALIMEIVVTFSMMFVTSAVATDTKA 183 (287)
Q Consensus 115 ~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~----------~~~~~~~~-~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~ 183 (287)
+|.+++.|+++|++||++|+.+++.+++... ..+++.|. .+..++++.|+++||+|+++++.. .|++.
T Consensus 105 ~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~-~d~~~ 183 (256)
T 3llq_A 105 PASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGS-THGRV 183 (256)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHH-HSTTS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHh-cCCCC
Confidence 9999999999999999999999999885211 12335553 378899999999999999999986 56665
Q ss_pred ccchhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcC--CCceeeeeehhhHHHHHHHHHHHHHh
Q 023102 184 IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSF--YKGIWVYLVGPVTGTFMGAWSYNMIR 251 (287)
Q Consensus 184 ~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~--~~~~wvy~~~P~lGa~la~~l~~~~~ 251 (287)
...+.|+.||+++....+..++.||++|||||+|||+++.+. |+++||||+||++|+++|+++|+++.
T Consensus 184 ~~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 184 PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 567899999999999999999999999999999999998754 56899999999999999999999985
No 9
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=2.8e-49 Score=357.35 Aligned_cols=223 Identities=30% Similarity=0.427 Sum_probs=184.8
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCC
Q 023102 36 YPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFP 115 (287)
Q Consensus 36 ~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~ 115 (287)
++++++|++++||+|||+|+++++++.......+...+...+++++|+++++.+++++++||||+|||||+++++.|+++
T Consensus 3 ~~~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~ 82 (281)
T 1ldf_A 3 QTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFD 82 (281)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCC
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCC
Confidence 34578999999999999999999987653222222334556899999999999999999999999999999999999999
Q ss_pred CCcchhhhhhhhhHHHHHHHHHHHHhcCcc--------------------cccccCCC--CChHHHHHHHHHHHHHHHHH
Q 023102 116 WKQVPIYAAAQLTGAVSASLTLRVLLHPIK--------------------HIGTTSPS--GSDLQALIMEIVVTFSMMFV 173 (287)
Q Consensus 116 ~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--------------------~~~~~~~~--~s~~~~~~~E~~~Tf~l~~~ 173 (287)
|.+++.|+++|++||++|+.+++.++++.. ...++.|. .+..++++.|+++||+|+++
T Consensus 83 ~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~ 162 (281)
T 1ldf_A 83 KRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGL 162 (281)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999886320 11234554 47889999999999999999
Q ss_pred HHhhccCCCcc--cchhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhc-------CC------CceeeeeehhhH
Q 023102 174 TSAVATDTKAI--GELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASS-------FY------KGIWVYLVGPVT 238 (287)
Q Consensus 174 ~~~~~~~~~~~--~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~-------~~------~~~wvy~~~P~l 238 (287)
++.+.++++.. ..+.|+.||+++....+..+++||++|||||+|||+++.. .| .++||||+||++
T Consensus 163 il~~~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vgPi~ 242 (281)
T 1ldf_A 163 ILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIV 242 (281)
T ss_dssp HHHHHCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHHHHH
T ss_pred HHHHhccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHHHHH
Confidence 99875433332 4689999999999999999999999999999999999861 22 279999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCC
Q 023102 239 GTFMGAWSYNMIRETDKPAH 258 (287)
Q Consensus 239 Ga~la~~l~~~~~~~~~~~~ 258 (287)
|+++|+++|++++.++.|.+
T Consensus 243 Ga~la~~~y~~l~~~~~~~~ 262 (281)
T 1ldf_A 243 GAIVGAFAYRKLIGRHLPCD 262 (281)
T ss_dssp HHHHHHHHHHHHTGGGC---
T ss_pred HHHHHHHHHHHHhCccCCcc
Confidence 99999999999987766543
No 10
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=7e-49 Score=346.07 Aligned_cols=214 Identities=36% Similarity=0.524 Sum_probs=187.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhcccc-cccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCC
Q 023102 39 GFLRKVIAEIIATYLLVFVTCGSAALSAY-DEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWK 117 (287)
Q Consensus 39 ~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~-~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 117 (287)
+++|++++||+|||+|+++++++...... .+...+++.+++++|+++++.+++++++||+|+|||||+++++.|+++|.
T Consensus 3 ~l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 82 (234)
T 2o9g_A 3 HMFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAK 82 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHH
Confidence 47899999999999999999988765432 22335678899999999999999999999999999999999999999999
Q ss_pred cchhhhhhhhhHHHHHHHHHHHHhcCcc------------cccccCCC-CChHHHHHHHHHHHHHHHHHHHhhccCCCcc
Q 023102 118 QVPIYAAAQLTGAVSASLTLRVLLHPIK------------HIGTTSPS-GSDLQALIMEIVVTFSMMFVTSAVATDTKAI 184 (287)
Q Consensus 118 ~~~~yi~aQ~lGa~~g~~~~~~~~~~~~------------~~~~~~~~-~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~~~ 184 (287)
+++.|+++|++|+++|+.+++.++++.. ..+++.|. .+..++++.|+++||+|+++++.. .|++..
T Consensus 83 ~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~-~d~~~~ 161 (234)
T 2o9g_A 83 EVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGA-TDKFAP 161 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHH-TSTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHh-cCCCCc
Confidence 9999999999999999999999986321 12345564 378899999999999999999987 455555
Q ss_pred cchhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhcC--CCceeeeeehhhHHHHHHHHHHHHHhcC
Q 023102 185 GELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSF--YKGIWVYLVGPVTGTFMGAWSYNMIRET 253 (287)
Q Consensus 185 ~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~~--~~~~wvy~~~P~lGa~la~~l~~~~~~~ 253 (287)
..+.|+.||+++....+..+++||++|||||+|||+++.++ |+++|+||++|++|+++|+++|++++.+
T Consensus 162 ~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 162 AGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred cchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 67899999999999999999999999999999999999875 5599999999999999999999999743
No 11
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=3.4e-49 Score=358.73 Aligned_cols=222 Identities=28% Similarity=0.411 Sum_probs=189.0
Q ss_pred ccCCCChhHHHHHHHHHHHHHHHHHHHHhHhhccc---ccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHH
Q 023102 32 WNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSA---YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAF 108 (287)
Q Consensus 32 ~~~~~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~---~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~ 108 (287)
.+|..+.+++|++++||+|||+|+|+++++..... ......+++.+++++|+++++.+++++++||||+|||||+++
T Consensus 52 ~~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~ 131 (304)
T 3cn5_A 52 LGELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 131 (304)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHH
Confidence 35677789999999999999999999998765422 122345678899999999999999999999999999999999
Q ss_pred HHhhCCCCCcchhhhhhhhhHHHHHHHHHHHHhcCcc---ccccc--CCCCChHHHHHHHHHHHHHHHHHHHhhccCCC-
Q 023102 109 AAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIK---HIGTT--SPSGSDLQALIMEIVVTFSMMFVTSAVATDTK- 182 (287)
Q Consensus 109 ~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~---~~~~~--~~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~- 182 (287)
++.|+++|.+++.|+++|++||++|+.+++.++++.. ..+.+ .+..+..++++.|+++||+|+++++.. .|++
T Consensus 132 ~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~-~d~~~ 210 (304)
T 3cn5_A 132 FLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSA-TDPKR 210 (304)
T ss_dssp HHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-EEEEE
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhhe-ecCcc
Confidence 9999999999999999999999999999999986421 11222 234578899999999999999999975 4433
Q ss_pred cc-cc----hhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHh---hcCCCceeeeeehhhHHHHHHHHHHHHHhcCC
Q 023102 183 AI-GE----LAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIA---SSFYKGIWVYLVGPVTGTFMGAWSYNMIRETD 254 (287)
Q Consensus 183 ~~-~~----~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~---~~~~~~~wvy~~~P~lGa~la~~l~~~~~~~~ 254 (287)
.. +. +.|+.||+++++..++++++||++|||||+|||+++ .+.|+++|+||+||++|+++|+++|++++.+.
T Consensus 211 ~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~ 290 (304)
T 3cn5_A 211 SARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAA 290 (304)
T ss_dssp ESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred CCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCCC
Confidence 22 22 789999999999999999999999999999999999 67899999999999999999999999997543
No 12
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=8e-47 Score=335.50 Aligned_cols=214 Identities=35% Similarity=0.541 Sum_probs=185.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhccc--cc----------c-----cccchhHHHHHHHHHHHHHHHHHhcccCCccc
Q 023102 39 GFLRKVIAEIIATYLLVFVTCGSAALSA--YD----------E-----HRVSKLGASVAGGLIVTVMIYAVGHISGAHMN 101 (287)
Q Consensus 39 ~~~~~~~~Ef~gTf~lv~~~~~~~~~~~--~~----------~-----~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~N 101 (287)
+++|++++||+|||+|+|+++++..... ++ + ...+++.+++++|+++++.+++++++||+|+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 5789999999999999999998765421 10 0 11234558999999999999999999999999
Q ss_pred hHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHHHHhcCc----ccccccCC--CCChHHHHHHHHHHHHHHHHHHH
Q 023102 102 PAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPI----KHIGTTSP--SGSDLQALIMEIVVTFSMMFVTS 175 (287)
Q Consensus 102 PavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~----~~~~~~~~--~~s~~~~~~~E~~~Tf~l~~~~~ 175 (287)
||||+++++.|+++|.+++.|+++|++|+++|+.+++.+++++ ...+++.| ..+..++++.|+++||+|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 9999999999999999999999999999999999999999752 23445666 44788999999999999999999
Q ss_pred hhccCCCcccchhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHh--h----cCCCceeeeeehhhHHHHHHHHHHHH
Q 023102 176 AVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIA--S----SFYKGIWVYLVGPVTGTFMGAWSYNM 249 (287)
Q Consensus 176 ~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~--~----~~~~~~wvy~~~P~lGa~la~~l~~~ 249 (287)
....|++......|+.+|+++...+++.+++||+++||||+|||++. . ++|+++|+||++|++|+++|+++|++
T Consensus 163 ~~~~~~~~~~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~ 242 (246)
T 2f2b_A 163 GIAVDERAPKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQY 242 (246)
T ss_dssp HHTTSTTSCTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHH
Confidence 87666665567889999999999999999999999999999999993 2 36788889999999999999999999
Q ss_pred Hhc
Q 023102 250 IRE 252 (287)
Q Consensus 250 ~~~ 252 (287)
++.
T Consensus 243 l~~ 245 (246)
T 2f2b_A 243 LTS 245 (246)
T ss_dssp HTC
T ss_pred HcC
Confidence 863
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=6.8e-48 Score=344.36 Aligned_cols=221 Identities=26% Similarity=0.350 Sum_probs=184.0
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCC
Q 023102 36 YPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFP 115 (287)
Q Consensus 36 ~~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~ 115 (287)
..++++|++++||+|||+|+|+++++...........+++.+++++|+++++.+++++++||||+|||||+++++.|+++
T Consensus 5 ~~~~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~ 84 (258)
T 3c02_A 5 FYKSYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFD 84 (258)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCc
Confidence 45678999999999999999999987654322222356778999999999999999999999999999999999999999
Q ss_pred CCcchhhhhhhhhHHHHHHHHHHHHhcCccc----c---ccc--CCCCChHHHHHHHHHHHHHHHHHHHhhccCCC---c
Q 023102 116 WKQVPIYAAAQLTGAVSASLTLRVLLHPIKH----I---GTT--SPSGSDLQALIMEIVVTFSMMFVTSAVATDTK---A 183 (287)
Q Consensus 116 ~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~----~---~~~--~~~~s~~~~~~~E~~~Tf~l~~~~~~~~~~~~---~ 183 (287)
|.+++.|+++|++||++|+.+++.++++... . +.. ....+..++++.|+++||+|+++++.+. |++ .
T Consensus 85 ~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~-d~~~~~~ 163 (258)
T 3c02_A 85 LKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVV-DENICGK 163 (258)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHH-CHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHh-CcccCCc
Confidence 9999999999999999999999999863211 0 101 1122456799999999999999999874 443 2
Q ss_pred ccchh-HHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhc------CC----CceeeeeehhhHHHHHHHHHHHHHhc
Q 023102 184 IGELA-GIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASS------FY----KGIWVYLVGPVTGTFMGAWSYNMIRE 252 (287)
Q Consensus 184 ~~~~~-~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~------~~----~~~wvy~~~P~lGa~la~~l~~~~~~ 252 (287)
...+. |+.||+++....+..+++||++|||||+|||+++.. .| +++||||++|++|+++|+++|++++.
T Consensus 164 ~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~ 243 (258)
T 3c02_A 164 FHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVIC 243 (258)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred ccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHhc
Confidence 34577 999999999999999999999999999999999873 34 66999999999999999999999987
Q ss_pred CCCCC
Q 023102 253 TDKPA 257 (287)
Q Consensus 253 ~~~~~ 257 (287)
++.|+
T Consensus 244 ~~~~~ 248 (258)
T 3c02_A 244 PLVDL 248 (258)
T ss_dssp HHHHH
T ss_pred ccCCC
Confidence 65543
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.59 E-value=4.5e-15 Score=131.28 Aligned_cols=101 Identities=31% Similarity=0.408 Sum_probs=84.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHH-----h
Q 023102 37 PPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAA-----V 111 (287)
Q Consensus 37 ~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l-----~ 111 (287)
..+.++.++.|+++||+|+++.++....++.. ....++.+|+.+...+++.+++||+|+|||+++++.+ .
T Consensus 140 ~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~-----~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g 214 (246)
T 2f2b_A 140 GISYWQAMLAEVVGTFLLMITIMGIAVDERAP-----KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFA 214 (246)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHTTSTTSC-----TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHheeeEEecCCCCC-----CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcC
Confidence 34678999999999999999988765432221 1247899999999999999999999999999999998 2
Q ss_pred hCCCCCcchhhhhhhhhHHHHHHHHHHHHhc
Q 023102 112 RHFPWKQVPIYAAAQLTGAVSASLTLRVLLH 142 (287)
Q Consensus 112 g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~ 142 (287)
++..|.+.|+||++|++|+++|+++++.+++
T Consensus 215 ~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 215 GTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp CCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 3556888889999999999999999988753
No 15
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.42 E-value=9.7e-13 Score=117.25 Aligned_cols=100 Identities=24% Similarity=0.223 Sum_probs=84.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCCc
Q 023102 39 GFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQ 118 (287)
Q Consensus 39 ~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 118 (287)
+..+.++.|+++||+|+++.++....+.... . ...++.+|+.+....+..+..||+.+|||+++++.+..+ .|.+
T Consensus 126 s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~--~--~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~~ 200 (263)
T 2b6o_A 126 SVGQATIVEIFLTLQFVLCIFATYDERRNGR--L--GSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR-NFTN 200 (263)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSCTTSCSS--C--CCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT-CCTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcccCCCC--c--ccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC-Cccc
Confidence 5688999999999999999887643221111 1 136888999999999999999999999999999999876 8999
Q ss_pred chhhhhhhhhHHHHHHHHHHHHhcC
Q 023102 119 VPIYAAAQLTGAVSASLTLRVLLHP 143 (287)
Q Consensus 119 ~~~yi~aQ~lGa~~g~~~~~~~~~~ 143 (287)
.|+||++|++|+++|+++++.++.+
T Consensus 201 ~Wvy~vgP~~Ga~la~~~y~~l~~~ 225 (263)
T 2b6o_A 201 HWVYWVGPVIGAGLGSLLYDFLLFP 225 (263)
T ss_dssp CTHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred eeHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999888764
No 16
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.40 E-value=1.5e-12 Score=113.37 Aligned_cols=99 Identities=25% Similarity=0.276 Sum_probs=81.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCCc
Q 023102 39 GFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQ 118 (287)
Q Consensus 39 ~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 118 (287)
+..+.++.|+++||+|++..++....++... . ...++.+|+.+.+.....++.||+.+|||+++++.+..+ .|.+
T Consensus 124 s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~--~--~~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~-~w~~ 198 (223)
T 3gd8_A 124 TAGHGLLVELIITFQLVFTIFASCDSKRTDV--T--GSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWEN 198 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCTTCSCC--C--SCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT-CCTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhccccCCc--c--CCccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc-CCCc
Confidence 5778999999999999999877654332211 1 125788888887777777789999999999999999876 7999
Q ss_pred chhhhhhhhhHHHHHHHHHHHHhc
Q 023102 119 VPIYAAAQLTGAVSASLTLRVLLH 142 (287)
Q Consensus 119 ~~~yi~aQ~lGa~~g~~~~~~~~~ 142 (287)
.|+||+++++|+++|+++++.++.
T Consensus 199 ~Wvy~vgP~~Ga~la~~~y~~~~~ 222 (223)
T 3gd8_A 199 HWIYWVGPIIGAVLAGGLYEYVFC 222 (223)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEeehhHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999988764
No 17
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.40 E-value=1.5e-12 Score=116.21 Aligned_cols=101 Identities=24% Similarity=0.256 Sum_probs=84.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCC
Q 023102 38 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWK 117 (287)
Q Consensus 38 ~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 117 (287)
.+..+.++.|+++||+|+++.++....+.... . ...++.+|+.+.+.....++.||+.+|||+++++.+..+ .|.
T Consensus 127 ~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~--~--~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~ 201 (266)
T 3d9s_A 127 TTQGQAMVVELILTFQLALCIFASTDSRRTSP--V--GSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN-RFS 201 (266)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHCTTCCSC--C--CCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT-CCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhcccCCCc--c--chHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC-Ccc
Confidence 46788999999999999999887653222111 1 136888999999999999999999999999999999876 788
Q ss_pred c-chhhhhhhhhHHHHHHHHHHHHhcC
Q 023102 118 Q-VPIYAAAQLTGAVSASLTLRVLLHP 143 (287)
Q Consensus 118 ~-~~~yi~aQ~lGa~~g~~~~~~~~~~ 143 (287)
+ .|+||++|++|+++|+++++.++.+
T Consensus 202 ~~~Wvy~vgP~~Ga~la~~~y~~l~~~ 228 (266)
T 3d9s_A 202 PAHWVFWVGPIVGAVLAAILYFYLLFP 228 (266)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred cCEeeeehHHHHHHHHHHHHHHHHhCC
Confidence 8 9999999999999999999988764
No 18
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.39 E-value=9.1e-13 Score=115.56 Aligned_cols=101 Identities=20% Similarity=0.250 Sum_probs=84.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhC-CC
Q 023102 37 PPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRH-FP 115 (287)
Q Consensus 37 ~~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~-~~ 115 (287)
..+..+.++.|+++||+|+++.++....+ . . ....++.+|+.+....+..+..||+.+|||+++++.+..+ ..
T Consensus 131 ~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~-~-~----~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~ 204 (234)
T 2o9g_A 131 GYSMLSALVVELVLSAGFLLVIHGATDKF-A-P----AGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWA 204 (234)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHTSTT-S-C----TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhcCCC-C-c----cchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCC
Confidence 34678999999999999999988765321 1 1 1247899999999999999999999999999999998753 35
Q ss_pred CCcchhhhhhhhhHHHHHHHHHHHHhcC
Q 023102 116 WKQVPIYAAAQLTGAVSASLTLRVLLHP 143 (287)
Q Consensus 116 ~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 143 (287)
|.+.|+||++|++|+++|+++++.++.+
T Consensus 205 ~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 205 LEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 6699999999999999999999988753
No 19
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.39 E-value=7.4e-13 Score=117.27 Aligned_cols=98 Identities=19% Similarity=0.228 Sum_probs=82.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhh-CCCC
Q 023102 38 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVR-HFPW 116 (287)
Q Consensus 38 ~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g-~~~~ 116 (287)
.+..+.++.|+++||+|+++.+++...+... ...++.+|+.+....+..+..||+.+|||+++++.+.. +..|
T Consensus 155 ~s~~~~f~~E~i~Tf~Lv~~il~~~d~~~~~------~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~ 228 (256)
T 3llq_A 155 YSLVSALLIEIILTAFFLIVILGSTHGRVPA------GFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWAL 228 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHSTTSCT------TCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhcCCCCCc------cchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcc
Confidence 4688999999999999999887655322111 23689999999999999999999999999999999864 3456
Q ss_pred CcchhhhhhhhhHHHHHHHHHHHHh
Q 023102 117 KQVPIYAAAQLTGAVSASLTLRVLL 141 (287)
Q Consensus 117 ~~~~~yi~aQ~lGa~~g~~~~~~~~ 141 (287)
...|+||++|++|+++|+++++.+.
T Consensus 229 ~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 229 QQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred cceeeeeeHHHHHHHHHHHHHHHhc
Confidence 6899999999999999999998875
No 20
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.39 E-value=1.4e-12 Score=119.17 Aligned_cols=102 Identities=25% Similarity=0.280 Sum_probs=83.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCC
Q 023102 38 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWK 117 (287)
Q Consensus 38 ~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 117 (287)
.+..+.++.|+++||+|+++.+++...+.... . ...++.+|+++.+.....+..||+.+|||+++++.+... .|.
T Consensus 171 ~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~--~--~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~-~w~ 245 (340)
T 3iyz_A 171 LTAGHGLLVELIITFQLVFTIFASCDDKRTDV--T--GSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWE 245 (340)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhhcCccCCc--c--cchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc-CCC
Confidence 35778999999999999999887654332211 1 125788898888777777799999999999999999865 799
Q ss_pred cchhhhhhhhhHHHHHHHHHHHHhcCc
Q 023102 118 QVPIYAAAQLTGAVSASLTLRVLLHPI 144 (287)
Q Consensus 118 ~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 144 (287)
+.|+||++|++|+++|+++++.++.+.
T Consensus 246 ~~WVywvgPiiGailaallY~~l~~p~ 272 (340)
T 3iyz_A 246 NHWIYWVGPIIGAVLAGALYEYVFCPD 272 (340)
T ss_pred cEeehhHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999888643
No 21
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.39 E-value=2.2e-12 Score=115.83 Aligned_cols=100 Identities=18% Similarity=0.062 Sum_probs=84.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCC
Q 023102 38 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWK 117 (287)
Q Consensus 38 ~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 117 (287)
.+..+.++.|+++||+|+++.++....+... ....++.+|+.++...+..+..||+.+|||+++++.+..+.-+.
T Consensus 166 ~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~~-----~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~ 240 (279)
T 2w2e_A 166 ASRTRGLFLEAFGTAILCLTVLMLAVEKHRA-----TWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPN 240 (279)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTSCSTT-----GGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccCCCCC-----cCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchh
Confidence 4678899999999999999988765432211 12478899999999999999999999999999999999864456
Q ss_pred cchhhhhhhhhHHHHHHHHHHHHhc
Q 023102 118 QVPIYAAAQLTGAVSASLTLRVLLH 142 (287)
Q Consensus 118 ~~~~yi~aQ~lGa~~g~~~~~~~~~ 142 (287)
..|+||++|++|+++|+++++.+..
T Consensus 241 ~~WVy~vgPiiGa~la~~ly~~l~~ 265 (279)
T 2w2e_A 241 YHWIYWLGPILGAFLAYSIWQMWKW 265 (279)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 7999999999999999999998875
No 22
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.38 E-value=1.7e-12 Score=117.41 Aligned_cols=101 Identities=26% Similarity=0.295 Sum_probs=83.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCC
Q 023102 38 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWK 117 (287)
Q Consensus 38 ~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 117 (287)
.+..+.++.|+++||+|+++.+++...+.... . ...++.+|+.+.+.+...++.||+.+|||+++++.+... .|.
T Consensus 132 ~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~~--~--~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~-~w~ 206 (301)
T 2zz9_A 132 LTAGHGLLVELIITFQLVFTIFASCDDKRTDV--T--GSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWE 206 (301)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHSCSSSSCC--S--SCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC-CCT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCCCCCCc--c--chHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC-CCc
Confidence 45788999999999999999887653222211 1 136788999988888888899999999999999999876 799
Q ss_pred cchhhhhhhhhHHHHHHHHHHHHhcC
Q 023102 118 QVPIYAAAQLTGAVSASLTLRVLLHP 143 (287)
Q Consensus 118 ~~~~yi~aQ~lGa~~g~~~~~~~~~~ 143 (287)
+.|+||++|++|+++|+++++.++.+
T Consensus 207 ~~WVy~vgPiiGailaa~ly~~l~~~ 232 (301)
T 2zz9_A 207 NHWIYWVGPIIGAVLAGALYEYVFCP 232 (301)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred ceeeeeeHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999888753
No 23
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.37 E-value=4.9e-13 Score=121.21 Aligned_cols=106 Identities=22% Similarity=0.254 Sum_probs=84.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHh--hCCC
Q 023102 38 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAV--RHFP 115 (287)
Q Consensus 38 ~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~--g~~~ 115 (287)
.+..+.++.|+++||+|+++.+.+...++...........++.+|+.+++..++.+..||+.+|||+++++.+. +...
T Consensus 182 ~s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~ 261 (304)
T 3cn5_A 182 YNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKV 261 (304)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTEEEEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhheecCccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCC
Confidence 46788999999999999999885443222111110011368899999999999999999999999999999997 1236
Q ss_pred CCcchhhhhhhhhHHHHHHHHHHHHhcC
Q 023102 116 WKQVPIYAAAQLTGAVSASLTLRVLLHP 143 (287)
Q Consensus 116 ~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 143 (287)
|.+.|+||++|++|+++|+++++.++.+
T Consensus 262 w~~~WvywvgPiiGa~laa~~y~~l~~~ 289 (304)
T 3cn5_A 262 WDDQWIFWVGPFIGAAVAAAYHQYVLRA 289 (304)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred cCceEEEeehHHHHHHHHHHHHHHHhCC
Confidence 8899999999999999999999888754
No 24
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.32 E-value=4.6e-12 Score=113.33 Aligned_cols=99 Identities=22% Similarity=0.237 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCCcc
Q 023102 40 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQV 119 (287)
Q Consensus 40 ~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~ 119 (287)
..+.++.|+++||+|+++.++....+.... ....++.+|+.+.+.+...++.||+.+|||+++++.+..+ .|.+.
T Consensus 137 ~~~~~~~E~i~T~~Lv~~i~~~~d~~~~~~----~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~-~~~~~ 211 (271)
T 1j4n_A 137 SGQGLGIEIIGTLQLVLCVLATTDRRRRDL----GGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH-NFQDH 211 (271)
T ss_dssp TTGGGHHHHHHHHHHHHHHHHHTCSSCCCC----CSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT-CCTTT
T ss_pred hHHHHHHHHHHHHHHHHHHHhhccccCCCc----cccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC-CCcce
Confidence 456789999999999998877543222111 1236888999998777777889999999999999998875 78999
Q ss_pred hhhhhhhhhHHHHHHHHHHHHhcC
Q 023102 120 PIYAAAQLTGAVSASLTLRVLLHP 143 (287)
Q Consensus 120 ~~yi~aQ~lGa~~g~~~~~~~~~~ 143 (287)
|+||++|++|+++|+++++.++.+
T Consensus 212 wv~~vgP~~Ga~la~~~y~~~~~~ 235 (271)
T 1j4n_A 212 WIFWVGPFIGAALAVLIYDFILAP 235 (271)
T ss_dssp THHHHHHHHHHHHHHHHHHTTTSC
T ss_pred eHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999888764
No 25
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.29 E-value=9.2e-12 Score=112.02 Aligned_cols=103 Identities=17% Similarity=0.224 Sum_probs=83.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhh-----
Q 023102 38 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVR----- 112 (287)
Q Consensus 38 ~~~~~~~~~Ef~gTf~lv~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g----- 112 (287)
.+..+.++.|+++||+|+++.++....+... ......++.+|+.+....+..+..||+.+|||+++++.+..
T Consensus 143 ~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~---~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~ 219 (281)
T 1ldf_A 143 INFVQAFAVEMVITAILMGLILALTDDGNGV---PRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGW 219 (281)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHCTTSSS---CCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhccCCCC---cccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhccc
Confidence 4688999999999999999988765322211 11124789999999999999999999999999999998864
Q ss_pred -CCCCC------cchhhhhhhhhHHHHHHHHHHHHhcC
Q 023102 113 -HFPWK------QVPIYAAAQLTGAVSASLTLRVLLHP 143 (287)
Q Consensus 113 -~~~~~------~~~~yi~aQ~lGa~~g~~~~~~~~~~ 143 (287)
...|. ..|+||++|++|+++|+++++.++.+
T Consensus 220 g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~~ 257 (281)
T 1ldf_A 220 GNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGR 257 (281)
T ss_dssp TTHHHHTTCSSCTTHHHHHHHHHHHHHHHHHHHHHTGG
T ss_pred ccccccccCCCceeeHHhHHHHHHHHHHHHHHHHHhCc
Confidence 11222 69999999999999999999988763
No 26
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.29 E-value=1.9e-12 Score=115.09 Aligned_cols=100 Identities=24% Similarity=0.324 Sum_probs=83.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhhccC---CCcccc--hhHHHHHHHHHHHHHhccCCCccccchhhhHHHHHhhc-CCCc
Q 023102 155 SDLQALIMEIVVTFSMMFVTSAVATD---TKAIGE--LAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASS-FYKG 228 (287)
Q Consensus 155 s~~~~~~~E~~~Tf~l~~~~~~~~~~---~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~~g~a~~~~-~~~~ 228 (287)
+..+.++.|+++||+|++..++.... .+.... ...+.+|+++.+.+++.+.+||+++|||++++.++.+. .|+.
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 87 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKK 87 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHHH
Confidence 46789999999999999986654221 111112 35688899999999999999999999999999999876 7999
Q ss_pred eeeeeehhhHHHHHHHHHHHHHhcCC
Q 023102 229 IWVYLVGPVTGTFMGAWSYNMIRETD 254 (287)
Q Consensus 229 ~wvy~~~P~lGa~la~~l~~~~~~~~ 254 (287)
...|+++|++|+++|+.+.+.+++++
T Consensus 88 ~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 113 (258)
T 3c02_A 88 IPVYFFAQLLGAFVGTSTVYGLYHGF 113 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcchh
Confidence 99999999999999999999988653
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=88.75 E-value=12 Score=32.98 Aligned_cols=101 Identities=13% Similarity=0.150 Sum_probs=54.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHHHHhc--C-----ccc
Q 023102 74 KLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLH--P-----IKH 146 (287)
Q Consensus 74 ~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~--~-----~~~ 146 (287)
.+..++.+++.+.+.++..+..--+ |--.+++ .+.+|.+|.+.+--|.-=.+|=++|+++.-++.. . +..
T Consensus 68 ~ll~g~~F~vGL~lVvl~G~ELFTg--n~l~~~a-~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~ 144 (285)
T 3kcu_A 68 KLVGGICFSLGLILCVVCGADLFTS--TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQ 144 (285)
T ss_dssp HHHHHHHHTHHHHHHHHHTCCCTTT--THHHHHH-HTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTH
T ss_pred HHHHHHHHHHHHHHHHHhCcccccc--chHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchH
Confidence 4445666766776677665555322 3223333 4578888877655554444444444444433321 1 100
Q ss_pred cc-------ccCCCCChHHHHHHHHHHHHHHHHHHHhh
Q 023102 147 IG-------TTSPSGSDLQALIMEIVVTFSMMFVTSAV 177 (287)
Q Consensus 147 ~~-------~~~~~~s~~~~~~~E~~~Tf~l~~~~~~~ 177 (287)
.+ ...-..+..+.|+-=.+|.++..+.+...
T Consensus 145 ~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 182 (285)
T 3kcu_A 145 WGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 01123366778888888888888877654
No 28
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=79.92 E-value=7 Score=34.37 Aligned_cols=100 Identities=16% Similarity=0.219 Sum_probs=57.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhcc-cCCccchHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHHHHhc----C---cc
Q 023102 74 KLGASVAGGLIVTVMIYAVGHI-SGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLH----P---IK 145 (287)
Q Consensus 74 ~~~~~l~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~----~---~~ 145 (287)
.+..++.+++.+.+.++..+.. +|-.+ .+++ .+.+|.+|.+.+--|.-=.+|=++|+++.-++.. . +.
T Consensus 67 ~ll~g~~F~vGL~lVvl~g~ELFTgn~l---~~~~-~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~ 142 (280)
T 3kly_A 67 KLLGGLAFSLGLILVVITGGELFTSSVL---ILVA-KASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGG 142 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCTTTTCC---CCSS-SSSSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTT
T ss_pred HHHHHHHHHHHHHHHHHccccccccchH---HHHH-HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCch
Confidence 3456667777777777665555 44333 2333 4567889888776665555555555555444321 1 10
Q ss_pred ccc-------ccCCCCChHHHHHHHHHHHHHHHHHHHhh
Q 023102 146 HIG-------TTSPSGSDLQALIMEIVVTFSMMFVTSAV 177 (287)
Q Consensus 146 ~~~-------~~~~~~s~~~~~~~E~~~Tf~l~~~~~~~ 177 (287)
..+ ...-..+..+.|+-=.+|.++..+.+...
T Consensus 143 ~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 181 (280)
T 3kly_A 143 QLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMT 181 (280)
T ss_dssp HHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 01123366778888888888888877664
No 29
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=44.49 E-value=1.5e+02 Score=25.41 Aligned_cols=101 Identities=10% Similarity=0.034 Sum_probs=50.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhcc-cCCccchHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHHHHhcCc-----ccc
Q 023102 74 KLGASVAGGLIVTVMIYAVGHI-SGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPI-----KHI 147 (287)
Q Consensus 74 ~~~~~l~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~-----~~~ 147 (287)
.+..++.+++.+.+.++..+.. +| |-.......+.|+.+|.+.+--|.-=.+|=++|+++.-+++... ...
T Consensus 58 ~ll~g~~F~vGl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~~ 134 (261)
T 4fc4_A 58 PLVMGATFGIALTLVIIAGSELFTG---HTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVD 134 (261)
T ss_dssp HHHHHHHTTHHHHHHHHTCCCCHHH---HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSCT
T ss_pred HHHHHHHHHHHHHHHHHcCCccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCchH
Confidence 3445555555555555443332 11 43322234556888888876666544455555554443333210 000
Q ss_pred ccc---C----CCCChHHHHHHHHHHHHHHHHHHHhh
Q 023102 148 GTT---S----PSGSDLQALIMEIVVTFSMMFVTSAV 177 (287)
Q Consensus 148 ~~~---~----~~~s~~~~~~~E~~~Tf~l~~~~~~~ 177 (287)
... . -..+..+.|+-=.+|.++..+.+...
T Consensus 135 ~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 171 (261)
T 4fc4_A 135 TSIVHSVALAKTTAPATVLFFKGALCNWLVCLAIWMA 171 (261)
T ss_dssp TSHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 01245667777777888877776654
No 30
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=41.29 E-value=1.7e+02 Score=25.21 Aligned_cols=104 Identities=12% Similarity=0.072 Sum_probs=55.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcccCCccchHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHHHHhcCcccc----
Q 023102 72 VSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHI---- 147 (287)
Q Consensus 72 ~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~---- 147 (287)
...+..++.+++.+.+.++.-+..--+ |-.......+.++.+|.+.+--|.-=.+|=++|+++.-+++......
T Consensus 62 ~~~ll~g~~F~~Gl~lVvl~g~eLfTg--n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~~ 139 (268)
T 3tds_E 62 MTKIVMGLSFAIALSLVIMTGTELFTG--NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGP 139 (268)
T ss_dssp THHHHHHHTCTHHHHHHHHHTCCCHHH--HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccccc--chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCcH
Confidence 334455666666666666554333111 43322234577888888876666555555555555554433211111
Q ss_pred -cc-------cCCCCChHHHHHHHHHHHHHHHHHHHhh
Q 023102 148 -GT-------TSPSGSDLQALIMEIVVTFSMMFVTSAV 177 (287)
Q Consensus 148 -~~-------~~~~~s~~~~~~~E~~~Tf~l~~~~~~~ 177 (287)
+. ..-..+..+.|+-=.+|.++..+.+...
T Consensus 140 ~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 177 (268)
T 3tds_E 140 VAEFFANTAASKASMPFTALFFRGILCNILVCVSVLCS 177 (268)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0012356777777788888887777654
No 31
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=33.72 E-value=10 Score=34.06 Aligned_cols=20 Identities=25% Similarity=0.227 Sum_probs=16.8
Q ss_pred cccCCccchHHHHHHHHhhC
Q 023102 94 HISGAHMNPAVTLAFAAVRH 113 (287)
Q Consensus 94 ~iSGah~NPavTla~~l~g~ 113 (287)
.=||||++||++++-.+..+
T Consensus 10 GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 10 GGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CSSHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHhC
Confidence 34789999999999888764
Done!