Your job contains 1 sequence.
>023105
MNNGNHNMSAINRFPFTASQWQELEHQALIFKYMVSGIPVPPDLLFTIKRSYYFDRSPPS
AAKHFTHQHQHVEWNCFQVGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRG
KNRSRKPVELNTSTCTANKSSSALSRYVYGPKEEVDEHAFFSEPSGKVRSFSAVSMDDSW
QLTPLTMSSSCSSSSSKQRSFSGLQSDYSDLQLKSCADNTPKQQDKQPEEIPQKTVHRFF
DEWPPKSRDSWLDLDDKSSKNASLSTASLSISIPSSHDFPIFSSRAP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023105
(287 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|A2XA73 - symbol:GRF1 "Growth-regulating factor ... 461 4.1e-52 3
TAIR|locus:2051597 - symbol:GRF6 "growth-regulating facto... 461 7.7e-48 2
TAIR|locus:2088272 - symbol:GRF5 "growth-regulating facto... 461 2.6e-47 2
TAIR|locus:2137549 - symbol:GRF2 "growth-regulating facto... 372 2.8e-34 1
TAIR|locus:2085221 - symbol:GRF4 "growth-regulating facto... 339 3.0e-33 2
TAIR|locus:2044873 - symbol:GRF3 "growth-regulating facto... 336 7.9e-33 2
TAIR|locus:2059206 - symbol:GRF1 "growth-regulating facto... 349 1.3e-31 1
TAIR|locus:2134986 - symbol:GRF8 "growth-regulating facto... 178 6.9e-22 2
TAIR|locus:2043595 - symbol:GRF9 "growth-regulating facto... 223 6.6e-18 1
TAIR|locus:2168676 - symbol:GRF7 "growth-regulating facto... 189 2.2e-14 1
>UNIPROTKB|A2XA73 [details] [associations]
symbol:GRF1 "Growth-regulating factor 1" species:39946
"Oryza sativa Indica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0030912 "response to deep water" evidence=IEP]
InterPro:IPR014977 InterPro:IPR014978 Pfam:PF08879 Pfam:PF08880
SMART:SM00951 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0006351 GO:GO:0030912 GO:GO:0009739 GO:GO:0016818
EMBL:AF201895 EMBL:CM000127 KEGG:dosa:Os02t0776900-02
KEGG:dosa:Os03t0441700-00 KEGG:dosa:Os04t0125800-00
KEGG:dosa:Os04t0136016-00 Gramene:A2XA73 eggNOG:NOG271934
Uniprot:A2XA73
Length = 396
Score = 461 (167.3 bits), Expect = 4.1e-52, Sum P(3) = 4.1e-52
Identities = 90/137 (65%), Positives = 104/137 (75%)
Query: 13 RFPFTASQWQELEHQALIFKYMVSGIPVPPDLLFTIKRSYYFDRS---PPSAAKHFTHQH 69
R+PFTASQWQELEHQALI+KYM SG P+P DL+ ++RS+ D + PS A F Q
Sbjct: 16 RYPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLA--FPPQP 73
Query: 70 QHVEWNCFQVGLGRKI-DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPV 128
+ W CF +G GRK DPEPGRCRRTDGKKWRCSKEAYPDSKYCE+HMHRGKNRSRKPV
Sbjct: 74 S-LGWGCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPV 132
Query: 129 ELNTSTCTANKSSSALS 145
E++ +T SSSA S
Sbjct: 133 EMSLAT-PPPPSSSATS 148
Score = 57 (25.1 bits), Expect = 4.1e-52, Sum P(3) = 4.1e-52
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 147 YVYG--PKEEVDEHAFFSEPSGKVRSFSAVSMDDSWQLTPLTM 187
Y YG KE EHAFFS+ + + +A WQ L M
Sbjct: 233 YAYGHATKEVHGEHAFFSDGTEREHHHAAAG-HGQWQFKQLGM 274
Score = 51 (23.0 bits), Expect = 4.1e-52, Sum P(3) = 4.1e-52
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 233 QKTVHRFFDEWP 244
QK + FFDEWP
Sbjct: 344 QKPLRHFFDEWP 355
>TAIR|locus:2051597 [details] [associations]
symbol:GRF6 "growth-regulating factor 6" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0048366 "leaf
development" evidence=TAS] InterPro:IPR014977 InterPro:IPR014978
Pfam:PF08879 Pfam:PF08880 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0006351
GO:GO:0048366 GO:GO:0016818 EMBL:AC006413 EMBL:AY060586
EMBL:AY125572 IPI:IPI00533650 PIR:A84476 RefSeq:NP_027759.1
UniGene:At.27363 EnsemblPlants:AT2G06200.1 GeneID:815176
KEGG:ath:AT2G06200 TAIR:At2g06200 eggNOG:NOG298059
HOGENOM:HOG000154035 InParanoid:Q9ZQ12 OMA:QWEELEN PhylomeDB:Q9ZQ12
ProtClustDB:CLSN2917074 Genevestigator:Q9ZQ12 Uniprot:Q9ZQ12
Length = 244
Score = 461 (167.3 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 96/173 (55%), Positives = 118/173 (68%)
Query: 13 RFPFTASQWQELEHQALIFKYMVSGIPVPPDLLFTIKRSYYFDRSPPSAAKH--FTHQ-H 69
R PFT SQW+ELE+QAL+FKY+ + +PVPP LLF IKR + F S S++ F+
Sbjct: 4 RIPFTESQWEELENQALVFKYLAANMPVPPHLLFLIKRPFLFSSSSSSSSSSSFFSPTLS 63
Query: 70 QHVEWNCFQVGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRS--RKP 127
H WN +++G+GRKID EPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRS RKP
Sbjct: 64 PHFGWNVYEMGMGRKIDAEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSSSRKP 123
Query: 128 VELNTSTCTANKSSSALSRYVYGPKEEVDEHAFFS-EPSGKVRSFSAVSMDDS 179
+ SSS R Y +D+ FFS EPSG ++S S +M+D+
Sbjct: 124 PPTQFTPNLFLDSSSRRRRSGY-----MDD--FFSIEPSGSIKSCSGSAMEDN 169
Score = 56 (24.8 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 222 KQQDKQPEEIP-QKTVHRFFDEWP 244
KQ+D EE K +RF DEWP
Sbjct: 209 KQRDHDNEEEQGSKRFYRFLDEWP 232
>TAIR|locus:2088272 [details] [associations]
symbol:GRF5 "growth-regulating factor 5" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0048366 "leaf
development" evidence=IMP;TAS] [GO:0009737 "response to abscisic
acid stimulus" evidence=RCA] [GO:0009793 "embryo development ending
in seed dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0016570
"histone modification" evidence=RCA] [GO:0048449 "floral organ
formation" evidence=RCA] InterPro:IPR014977 InterPro:IPR014978
Pfam:PF08879 Pfam:PF08880 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GO:GO:0006355 GO:GO:0006351 GO:GO:0048366
EMBL:AB019229 GO:GO:0016818 eggNOG:NOG271934 EMBL:AY102638
EMBL:AB493612 IPI:IPI00533172 RefSeq:NP_188012.2 UniGene:At.43414
IntAct:Q8L8A6 STRING:Q8L8A6 EnsemblPlants:AT3G13960.1 GeneID:820609
KEGG:ath:AT3G13960 TAIR:At3g13960 HOGENOM:HOG000239546
InParanoid:Q8L8A6 OMA:QMGFGRK PhylomeDB:Q8L8A6
ProtClustDB:CLSN2918095 Genevestigator:Q8L8A6 Uniprot:Q8L8A6
Length = 397
Score = 461 (167.3 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 92/167 (55%), Positives = 113/167 (67%)
Query: 11 INRFPFTASQWQELEHQALIFKYMVSGIPVPPDLLFTIKRSYYFDRSPPSAAKHFTHQHQ 70
I R PFT +QW+ELEHQALI+KYMVSG+PVPP+L+F+I+RS D S S HQ
Sbjct: 12 IGRPPFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRRS--LDTSLVSRLL----PHQ 65
Query: 71 HVEWNCFQVGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEL 130
+ W C+Q+G GRK DPEPGRCRRTDGKKWRCS+EAYPDSKYCE+HMHRG+NR+RK ++
Sbjct: 66 SLGWGCYQMGFGRKPDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARKSLDQ 125
Query: 131 NTSTCTANKSSSALSRYVYGPKEEVDEHAFFSEPSGKVRSFSAVSMD 177
N +T T S S P + + S S S S+ SMD
Sbjct: 126 NQTTTTPLTSPSLSFTNNNNPSPTLSSSSS-SNSSSTTYSASSSSMD 171
Score = 51 (23.0 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 209 SDLQLKSCADNTPKQQDKQPEEIPQKTVHRFFDE-W 243
S L S D ++ +K E +K++H FF E W
Sbjct: 339 SVLANSSRQDQNQEEDEKDSSESSKKSLHHFFGEDW 374
>TAIR|locus:2137549 [details] [associations]
symbol:GRF2 "growth-regulating factor 2" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0048366 "leaf
development" evidence=IGI] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR014977 InterPro:IPR014978 Pfam:PF08879 Pfam:PF08880
SMART:SM00951 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
EMBL:AL035709 EMBL:AL161592 GO:GO:0006355 GO:GO:0006351
GO:GO:0016818 HOGENOM:HOG000243855 ProtClustDB:CLSN2683866
EMBL:AY102635 EMBL:AK176372 EMBL:AK176432 EMBL:AB493726
IPI:IPI00542041 PIR:T06021 RefSeq:NP_195488.2 UniGene:At.2873
IntAct:Q8L8A8 STRING:Q8L8A8 PaxDb:Q8L8A8 PRIDE:Q8L8A8
EnsemblPlants:AT4G37740.1 GeneID:829930 KEGG:ath:AT4G37740
TAIR:At4g37740 eggNOG:NOG283878 InParanoid:Q8L8A8 OMA:KSTFCSL
PhylomeDB:Q8L8A8 Genevestigator:Q8L8A8 Uniprot:Q8L8A8
Length = 535
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 72/143 (50%), Positives = 99/143 (69%)
Query: 15 PFTASQWQELEHQALIFKYMVSGIPVPPDLLFTIKRSYY-FDRSPPSAAKHFTHQHQHVE 73
PFT +QW ELE QALI+KY+ + +PVP LL +IK+S+Y + PPS+
Sbjct: 164 PFTLTQWAELEQQALIYKYITANVPVPSSLLISIKKSFYPYGSLPPSS----------FG 213
Query: 74 WNCFQVGL-GRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVELNT 132
W F +G G +DPEPGRCRRTDGKKWRCS++A PD KYCERH++RG++RSRKPVE+ +
Sbjct: 214 WGTFHLGFAGGNMDPEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVEVQS 273
Query: 133 STCTANKSSSALSRYVYGPKEEV 155
N++++A S+ V P++ V
Sbjct: 274 GQ---NQTAAAASKAVTTPQQPV 293
>TAIR|locus:2085221 [details] [associations]
symbol:GRF4 "growth-regulating factor 4" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0048366 "leaf development"
evidence=TAS] [GO:0006626 "protein targeting to mitochondrion"
evidence=RCA] InterPro:IPR014977 InterPro:IPR014978 Pfam:PF08879
Pfam:PF08880 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GO:GO:0006355 GO:GO:0006351 GO:GO:0048366
EMBL:AL132969 GO:GO:0016818 HOGENOM:HOG000092972
ProtClustDB:CLSN2683836 EMBL:AY102637 IPI:IPI00534503 PIR:T47548
RefSeq:NP_190859.2 UniGene:At.35248 HSSP:O34634 IntAct:Q8L8A7
EnsemblPlants:AT3G52910.1 GeneID:824457 KEGG:ath:AT3G52910
TAIR:At3g52910 InParanoid:Q8L8A7 OMA:PYEANSG PhylomeDB:Q8L8A7
Genevestigator:Q8L8A7 Uniprot:Q8L8A7
Length = 380
Score = 339 (124.4 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 72/155 (46%), Positives = 100/155 (64%)
Query: 16 FTASQWQELEHQALIFKYMVSGIPVPPDLLFTIKRSYYFDRSPPSAAKH-FTHQHQHVEW 74
F+ +QWQELE QALI++YM++G VP +LL IK+S +SP H H H +
Sbjct: 83 FSWAQWQELELQALIYRYMLAGASVPQELLLPIKKSL-LHQSPMHFLHHPLQHSFPHHQP 141
Query: 75 NCFQVGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVELNTST 134
+ + G G +DPEPGRC+RTDGKKWRCS++ KYC+RH+HRG+NRSRKPVE T+T
Sbjct: 142 SWYW-GRGA-MDPEPGRCKRTDGKKWRCSRDVVAGHKYCDRHIHRGRNRSRKPVETATTT 199
Query: 135 CTANKSSSALSRYVYGPK--EEVDEHAFFSEPSGK 167
T +++A S +V G + + + FFS S +
Sbjct: 200 ITTTATTTA-SSFVLGEELGHGPNNNHFFSSGSSQ 233
Score = 39 (18.8 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 5/9 (55%), Positives = 7/9 (77%)
Query: 236 VHRFFDEWP 244
+ FFD+WP
Sbjct: 275 LRHFFDDWP 283
>TAIR|locus:2044873 [details] [associations]
symbol:GRF3 "growth-regulating factor 3" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0048366 "leaf development"
evidence=IGI] [GO:0009624 "response to nematode" evidence=IEP]
[GO:0048364 "root development" evidence=IMP] [GO:0061062
"regulation of nematode larval development" evidence=IMP]
InterPro:IPR014977 InterPro:IPR014978 Pfam:PF08879 Pfam:PF08880
SMART:SM00951 GO:GO:0005524 GO:GO:0005634 EMBL:CP002685
GO:GO:0006355 GO:GO:0006351 GO:GO:0009624 GO:GO:0048364
EMBL:AC006919 GO:GO:0016818 UniGene:At.24317 GO:GO:0061062
EMBL:AY102636 EMBL:AK117417 EMBL:BT026472 IPI:IPI00547117
PIR:C84780 RefSeq:NP_181181.1 UniGene:At.43815
EnsemblPlants:AT2G36400.1 GeneID:818213 KEGG:ath:AT2G36400
TAIR:At2g36400 HOGENOM:HOG000092972 InParanoid:Q9SJR5 OMA:YFLHHPL
PhylomeDB:Q9SJR5 ProtClustDB:CLSN2683836 Genevestigator:Q9SJR5
Uniprot:Q9SJR5
Length = 398
Score = 336 (123.3 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 75/141 (53%), Positives = 92/141 (65%)
Query: 12 NRFP-----FTASQWQELEHQALIFKYMVSGIPVPPDLLFTIKRSYYFDRSPPSAAKHFT 66
+RFP F+ +QWQELE QALI++YM++G VP +LL IK+S PS H
Sbjct: 68 SRFPKMGSFFSWAQWQELELQALIYRYMLAGAAVPQELLLPIKKSLL--HLSPSYFLHHP 125
Query: 67 HQH-QHVEWNCFQVGLGRK-IDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRS 124
QH H + + LGR +DPEPGRCRRTDGKKWRCS++ + KYCERHMHRG+NRS
Sbjct: 126 LQHLPHYQPAWY---LGRAAMDPEPGRCRRTDGKKWRCSRDVFAGHKYCERHMHRGRNRS 182
Query: 125 RKPVELNTSTCTANKSSSALS 145
RKPVE T T A +S A S
Sbjct: 183 RKPVETPT-TVNATATSMASS 202
Score = 38 (18.4 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 239 FFDEWP 244
FFD+WP
Sbjct: 291 FFDDWP 296
>TAIR|locus:2059206 [details] [associations]
symbol:GRF1 "growth-regulating factor 1" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0048366 "leaf development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009624 "response to nematode" evidence=IEP] [GO:0048364 "root
development" evidence=IMP] [GO:0061062 "regulation of nematode
larval development" evidence=IMP] [GO:0009737 "response to abscisic
acid stimulus" evidence=RCA] [GO:0009793 "embryo development ending
in seed dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR014977 InterPro:IPR014978 Pfam:PF08879 Pfam:PF08880
SMART:SM00951 GO:GO:0005524 GO:GO:0005634 EMBL:AC004786
EMBL:CP002685 GO:GO:0006355 GO:GO:0006351 GO:GO:0009624
GO:GO:0048364 GO:GO:0016818 EMBL:AY102634 EMBL:AB493560
IPI:IPI00518442 PIR:E84617 RefSeq:NP_179869.1 UniGene:At.28144
IntAct:O81001 STRING:O81001 PRIDE:O81001 EnsemblPlants:AT2G22840.1
GeneID:816815 KEGG:ath:AT2G22840 TAIR:At2g22840
HOGENOM:HOG000243855 InParanoid:O81001 OMA:ISAPMAS PhylomeDB:O81001
ProtClustDB:CLSN2683866 Genevestigator:O81001 GO:GO:0061062
Uniprot:O81001
Length = 530
Score = 349 (127.9 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 71/151 (47%), Positives = 99/151 (65%)
Query: 1 MNNGN-H-NMSAINRFPFTASQWQELEHQALIFKYMVSGIPVPPDLLFTIKRSYY-FDRS 57
MN N H N+ + PF+ +QW ELE QALI+KY+ + +PVP LL ++K+S++ +
Sbjct: 117 MNTSNMHGNLLTGVKGPFSLTQWAELEQQALIYKYITANVPVPSSLLLSLKKSFFPYGSL 176
Query: 58 PPSAAKHFTHQHQHVEWNCFQVGL-GRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERH 116
PP++ W F +G G +DPEPGRCRRTDGKKWRCS++A PD KYCERH
Sbjct: 177 PPNS----------FGWGSFHLGFSGGNMDPEPGRCRRTDGKKWRCSRDAVPDQKYCERH 226
Query: 117 MHRGKNRSRKPVE----LNTSTCTANKSSSA 143
++RG++RSRKPVE NT+ A +++A
Sbjct: 227 INRGRHRSRKPVEGQNGHNTNAAAAASAAAA 257
>TAIR|locus:2134986 [details] [associations]
symbol:GRF8 "growth-regulating factor 8" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0048366 "leaf development"
evidence=TAS] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] InterPro:IPR014977 InterPro:IPR014978 Pfam:PF08879
Pfam:PF08880 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
EMBL:CP002687 GO:GO:0006355 GO:GO:0009941 GO:GO:0006351
GO:GO:0048366 EMBL:AC002343 GO:GO:0016818 EMBL:AL109619
IPI:IPI00532271 PIR:T13463 RefSeq:NP_194146.1 UniGene:At.51240
UniGene:At.69386 PRIDE:Q9SU44 EnsemblPlants:AT4G24150.1
GeneID:828515 KEGG:ath:AT4G24150 TAIR:At4g24150
HOGENOM:HOG000153539 InParanoid:Q9SU44 OMA:KHVESSH PhylomeDB:Q9SU44
ProtClustDB:CLSN2915827 ArrayExpress:Q9SU44 Genevestigator:Q9SU44
Uniprot:Q9SU44
Length = 493
Score = 178 (67.7 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 30/44 (68%), Positives = 34/44 (77%)
Query: 86 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 129
D EP RC+RTDGKKWRCS+ PD KYCERH H+ + RSRK VE
Sbjct: 243 DLEPWRCKRTDGKKWRCSRNVIPDQKYCERHTHKSRPRSRKHVE 286
Score = 108 (43.1 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 16 FTASQWQELEHQALIFKYMVSGIPVPPDLLFTIKRSYYFDRSP 58
F+ +QW ELE Q I+KYM++ +PVPP+LL +++ + +P
Sbjct: 150 FSEAQWHELERQRNIYKYMMASVPVPPELLTPFPKNHQSNTNP 192
>TAIR|locus:2043595 [details] [associations]
symbol:GRF9 "growth-regulating factor 9" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0048366 "leaf
development" evidence=TAS] InterPro:IPR014977 InterPro:IPR014978
Pfam:PF08879 Pfam:PF08880 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GO:GO:0006355 GO:GO:0006351 EMBL:AC003680
EMBL:AC002387 GO:GO:0016818 EMBL:AY074647 EMBL:AB493593
IPI:IPI00518449 PIR:A84891 PIR:T00861 RefSeq:NP_850438.2
UniGene:At.37017 IntAct:Q8S9M3 GeneID:819156 KEGG:ath:AT2G45480
TAIR:At2g45480 HOGENOM:HOG000176900 InParanoid:Q8S9M3
PhylomeDB:Q8S9M3 Genevestigator:Q8S9M3 Uniprot:Q8S9M3
Length = 431
Score = 223 (83.6 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 53/140 (37%), Positives = 79/140 (56%)
Query: 12 NRFPFT-ASQWQELEHQALIFKYMVSGIPVPPDLLFTIKRSYYFDRSPPSAAKHFTHQHQ 70
N++P+ A+Q E QAL+++Y+ +G+ VP L+ I S S++ ++ +
Sbjct: 20 NKWPWMKAAQLMEFRMQALVYRYIEAGLRVPHHLVVPIWNSLAL-----SSSSNYNYHSS 74
Query: 71 HVEWNCFQVGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEL 130
+ N + ++ EP RCRRTDGKKWRCS KYCERHMHRG+ RSRK VE
Sbjct: 75 SLLSNKGVTHIDT-LETEPTRCRRTDGKKWRCSNTVLLFEKYCERHMHRGRKRSRKLVES 133
Query: 131 NT---STCTANKSSSALSRY 147
++ S+ T ++ L RY
Sbjct: 134 SSEVASSSTKYDNTYGLDRY 153
Score = 187 (70.9 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 35/70 (50%), Positives = 45/70 (64%)
Query: 64 HFTHQHQHVEWNCFQVGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNR 123
HF+ E CF++ G + D EPGRCRRTDGKKWRCSK+ KYC++HMHRG +
Sbjct: 286 HFSPDTVLQERGCFRLQ-GVETDNEPGRCRRTDGKKWRCSKDVLSGQKYCDKHMHRGMKK 344
Query: 124 SRKPVELNTS 133
+ PV+ S
Sbjct: 345 -KHPVDTTNS 353
>TAIR|locus:2168676 [details] [associations]
symbol:GRF7 "growth-regulating factor 7" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0048366 "leaf
development" evidence=TAS] [GO:0010114 "response to red light"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0080167 "response to karrikin" evidence=IEP] InterPro:IPR014977
InterPro:IPR014978 Pfam:PF08879 Pfam:PF08880 SMART:SM00951
GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GO:GO:0006355
GO:GO:0006351 GO:GO:0080167 GO:GO:0010218 GO:GO:0010114
GO:GO:0048366 GO:GO:0016818 EMBL:AB015476 EMBL:AK176109
EMBL:BT010882 EMBL:AB493791 IPI:IPI00520748 RefSeq:NP_200177.1
UniGene:At.29543 PRIDE:Q9FJB8 EnsemblPlants:AT5G53660.1
GeneID:835447 KEGG:ath:AT5G53660 TAIR:At5g53660
HOGENOM:HOG000152500 InParanoid:Q9FJB8 OMA:ATTEQEN PhylomeDB:Q9FJB8
ProtClustDB:CLSN2916320 Genevestigator:Q9FJB8 Uniprot:Q9FJB8
Length = 365
Score = 189 (71.6 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 86 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 129
D EPGRCRRTDGKKWRC+KE + KYCE+H+HRG+ RSRK VE
Sbjct: 107 DLEPGRCRRTDGKKWRCAKEVVSNHKYCEKHLHRGRPRSRKHVE 150
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 287 238 0.00091 113 3 11 22 0.43 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 615 (65 KB)
Total size of DFA: 232 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.85u 0.08s 21.93t Elapsed: 00:00:01
Total cpu time: 21.85u 0.08s 21.93t Elapsed: 00:00:01
Start: Sat May 11 10:57:51 2013 End: Sat May 11 10:57:52 2013