Citrus Sinensis ID: 023110

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------
Protein Sequence
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHTT
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHcccEEEEEEcccccccccccccccHHHHHccccEEEEEcccccHHHHHHHHHcccccEEEEccccccccHHHHHHHcccccEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHHHHcccccccccccccEEEcccHHHHHHHHHHHHcccccccccEEEEccccccHHHHHHHHHHHHccccccEEEccccccccccccccccccHHHccccccHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHcccccccccEEEEcccccHHHHHHHHHHccccEEEEHHHHHccccHHHHHHHccccEEEEEEcccHcccccccccccccccccccccccHHHHHHHHHHccccEEEEEEcccccccccccHHHHHHHHHHccccccEcccccccEEEEEHHHHHHHHHHHHHccccccEEEEEcccccccHHHHHHHHHHHHcccccEEEEcccccccccccccccHHHHcccHHHHHHHcHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MGGTRFIGVFLSRLLvkeghqvtlftrgkapiaqqlpgesdqEFAEFSSKILhlkgdrkdydfvksslsakgfdvvydingreadevepildalpnleqFIYCssagvylksdllphcetdtvdpksrhkgklntESVLEskgvnwtslrpvyiygplnynpvEEWFFHRlkagrpipipgsgiqvtqlgHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAkaagfpepelvhynpkefdfgkkkafpfrdqlrrqsmcsdgnlsLTWWKVLQTHTT
Flexible Loop (DISEMBL)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILhlkgdrkdYDFVKsslsakgfdvVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCEtdtvdpksrhkgklntesvleskgvnwtslrpVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGnekasrqvfniSGEKYVTFDGLARACAKAAgfpepelvhynpkefdfgkKKAFPFRDQLRRqsmcsdgnlsltwWKVLQTHTT
Low Complexity Region (SEG)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHTT
Disordered region (IsUnstruct)
****RFIGVFLSRLLVKEGHQVTLFTRGKAPI**************FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET******************LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQ****
Disordered Region (DISOPRED)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQT***
Disordered Region (DISEMBL)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ*********AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD***********LNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHTT
Disordered Region (DISPRO)
*GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQT***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHTT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	287	2.2.26 [Sep-21-2011]
Q9SA52	378	Chloroplast stem-loop bin	yes	no	0.912	0.693	0.885	1e-141
Q9LYA9	406	Chloroplast stem-loop bin	no	no	0.874	0.618	0.363	7e-40
Q45291	329	UDP-glucose 4-epimerase O	no	no	0.787	0.686	0.251	2e-05
P55579	396	Uncharacterized protein y	yes	no	0.766	0.555	0.230	0.0002
P52577	310	Isoflavone reductase homo	no	no	0.477	0.441	0.275	0.0007

>sp|Q9SA52|CP41B_ARATH Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1

 Score =  502 bits (1293), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 232/262 (88%), Positives = 254/262 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAKA GFPEPE
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPE 298

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ 262
           +VHYNPKEFDFGKKKAFPFRDQ
Sbjct: 299 IVHYNPKEFDFGKKKAFPFRDQ 320

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system. Involved in the regulation of heteroglycans and monosaccharide mobilization.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LYA9|CP41A_ARATH Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1

 Score =  164 bits (415), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 97/267 (36%), Positives = 142/267 (53%), Gaps = 16/267 (5%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG   IG + ++ L+  GH VT+ T G    ++++       F+E  S      G +  +
Sbjct: 90  GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSG-----GGKTVW 143

Query: 62  DF---VKSSLSAKGFDVVYDINGREADEVEPILD--ALPNLEQFIYCSSAGVYLKSDLLP 116
                V + +  + FDVV D NG++ D V P++D      ++QF++ SSAG+Y  ++  P
Sbjct: 144 GNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPP 203

Query: 117 HCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
           H E D V   + H   +  E  L     NW S RP Y+ G  N    EEWFF R+   R 
Sbjct: 204 HVEGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRA 260

Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKAAG 235
           +PIPGSG+Q+T + HV+DL+      + N E AS  +FN   ++ VT DG+A+ CA AAG
Sbjct: 261 VPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG 320

Query: 236 FPEPELVHYNPKEFDFGKKKAFPFRDQ 262
               E+VHY+PK      KKAF FR+ 
Sbjct: 321 -KTVEIVHYDPKAIGVDAKKAFLFRNM 346

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system.

Arabidopsis thaliana (taxid: 3702)

>sp|Q45291|GALE_CORGL UDP-glucose 4-epimerase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=galE PE=3 SV=2

 Score = 50.1 bits (118), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 113/282 (40%), Gaps = 56/282 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  ++G   + +L++ GH VT+         + +P ++             ++GD    
Sbjct: 7   GGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADARL-----------IEGDVN-- 53

Query: 62  DFVKSSLSAKGFDVVYDINGRE--ADEVE--------------PILDAL--PNLEQFIYC 103
           D V+  LS  GF+ V     R    + VE               +LDA+    +   ++ 
Sbjct: 54  DVVEEVLSEGGFEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMRAHGVNNLVFS 113

Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRHKG-KLNTESVLESK----GVNWTSLRPVYI---Y 155
           S+A  Y + D++P  E     P + +   KL+ +  + S     G+  TSLR   +   Y
Sbjct: 114 STAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFNVAGAY 173

Query: 156 GPLNYN-PVEEWFF---------HRLKA---GRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
           G +  N  VE             HR K    G   P P  G  V    H+ DLA+A V  
Sbjct: 174 GNIGENREVETHLIPLVLQVATGHREKTFMFGDDWPTP-DGTAVRDYIHILDLAKAHVLA 232

Query: 203 L-GNEKASRQVFNI-SGEKYVTFDGLARACAKAAGFPEPELV 242
           L  NE    ++FN+ SG+ Y +   +   C +  G P P  V
Sbjct: 233 LESNEAGKHRIFNLGSGDGY-SVKQVVEMCREVTGHPIPAEV 273

Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) (taxid: 196627)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|P55579|Y4NG_RHISN Uncharacterized protein y4nG OS=Rhizobium sp. (strain NGR234) GN=NGR_a02350 PE=4 SV=1

 Score = 46.6 bits (109), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 98/247 (39%), Gaps = 27/247 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILH-------L 54
           GG+ + G  LS+ L+++G  V +F           PG S          IL        L
Sbjct: 56  GGSGYFGELLSKQLLRQGTYVRVFDLNP-------PGFSHPNLEFLKGTILDRNAVRQAL 108

Query: 55  KGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILD--ALPNLEQFIYCSSAGVYLKS 112
            G  K +  V     AK  D+ + +N       + I+D      +E+F+Y SS+ V+   
Sbjct: 109 SGIDKVFHNVAQVPLAKEKDLFWSVN---CGGTQIIVDESVATGIEKFVYTSSSAVFGAP 165

Query: 113 DLLPHCETDTVDP-----KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWF 167
              P  E    +P     +++  G++  +  ++  G++   +RP  + G      V +  
Sbjct: 166 KSNPVTEETEPNPAEDYGRAKLAGEIICKEAMQRDGLDVAIVRPRTVLG-YGRQGVVQIL 224

Query: 168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA 227
           F  ++ G  IP+ G G    Q  H  DLA A +    +       +NI   ++ T   L 
Sbjct: 225 FDWVERGLDIPVLGGGNNKYQFVHSDDLASACIAA--SNVKGFATYNIGAAEFGTMRELL 282

Query: 228 RACAKAA 234
           +   K A
Sbjct: 283 QVVIKHA 289

Putative nucleotide sugar epimerase/dehydrogenase.

Rhizobium sp. (strain NGR234) (taxid: 394)

>sp|P52577|IFRH_ARATH Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1

 Score = 44.7 bits (104), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 12/149 (8%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           +GGT +IG FL     K GH      R +A ++  + G++ Q F +    ILH  GD  D
Sbjct: 11  IGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTILH--GDLND 67

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE- 119
           ++ +  ++  K  DVV    G        ILD    +       +   +L S+     + 
Sbjct: 68  HESLVKAI--KQVDVVISTVGSMQ-----ILDQTKIISAIKEAGNVKRFLPSEFGVDVDR 120

Query: 120 TDTVDP-KSRHKGKLNTESVLESKGVNWT 147
           T  V+P KS   GK+     +E++G+ +T
Sbjct: 121 TSAVEPAKSAFAGKIQIRRTIEAEGIPYT 149

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	287
255542956	381	NAD dependent epimerase/dehydratase, put	0.912	0.687	0.916	1e-142
363806740	378	uncharacterized protein LOC100791076 [Gl	0.912	0.693	0.893	1e-141
312282041	379	unnamed protein product [Thellungiella h	0.912	0.691	0.893	1e-141
356572914	378	PREDICTED: uncharacterized protein At1g0	0.912	0.693	0.893	1e-141
388497252	378	unknown [Medicago truncatula]	0.912	0.693	0.896	1e-140
118489564	380	unknown [Populus trichocarpa x Populus d	0.912	0.689	0.900	1e-140
15217485	378	RNA binding protein [Arabidopsis thalian	0.912	0.693	0.885	1e-140
3850621	374	putative RNA binding protein [Arabidopsi	0.912	0.700	0.885	1e-139
388512335	378	unknown [Medicago truncatula]	0.912	0.693	0.893	1e-139
224124986	380	predicted protein [Populus trichocarpa]	0.912	0.689	0.900	1e-139

>gi|255542956|ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] gi|223548502|gb|EEF49993.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 240/262 (91%), Positives = 253/262 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q+LPGESDQ++A+FSSK+LHLKGDRKD
Sbjct: 61  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQKLPGESDQDYADFSSKVLHLKGDRKD 120

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           +DFVKSSLSAKGFDVVYDINGREADEV PILDALPNLEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 121 FDFVKSSLSAKGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKSDLLPHSEK 180

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 DAVDPKSRHKGKLETESLLESSGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLARACAKA GFPEPE
Sbjct: 241 NSGIQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPE 300

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ 262
           +VHYNPKEFDFGKKKAFPFRDQ
Sbjct: 301 IVHYNPKEFDFGKKKAFPFRDQ 322

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806740|ref|NP_001242018.1| uncharacterized protein LOC100791076 [Glycine max] gi|255647108|gb|ACU24022.1| unknown [Glycine max]

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 234/262 (89%), Positives = 255/262 (97%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP+ QQLPGESD ++A+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDSDYADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           +DFVKSSLSA+GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH ET
Sbjct: 119 FDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAET 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L++KGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQAKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
           GSGIQ+TQLGHVKDLA+AF+QV GNEKAS++VFNISG+K+VTFDGLARACAKA GFPEPE
Sbjct: 239 GSGIQITQLGHVKDLAKAFIQVFGNEKASKEVFNISGDKHVTFDGLARACAKAGGFPEPE 298

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ 262
           ++HYNPK+FDFGKKK+FPFRDQ
Sbjct: 299 IIHYNPKDFDFGKKKSFPFRDQ 320

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312282041|dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]

 Score =  506 bits (1304), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 234/262 (89%), Positives = 254/262 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPI+DALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEV 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKY+TFDGLARACAKA GFPEPE
Sbjct: 239 NSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYITFDGLARACAKAGGFPEPE 298

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ 262
           +VHYNPKEFDFGKKKAFPFRDQ
Sbjct: 299 IVHYNPKEFDFGKKKAFPFRDQ 320

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572914|ref|XP_003554610.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic-like [Glycine max]

 Score =  506 bits (1302), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 234/262 (89%), Positives = 254/262 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP+ QQLPGESD ++A+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDNDYADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           +DFVKSSLSA+GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH ET
Sbjct: 119 FDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAET 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+++GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQARGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
            SG+Q+TQLGHVKDLA AF+QVLGNEKAS++VFNISGEKYVTFDGLARACAKA GFPEPE
Sbjct: 239 SSGLQITQLGHVKDLATAFIQVLGNEKASKEVFNISGEKYVTFDGLARACAKAGGFPEPE 298

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ 262
           ++HYNPK+FDFGKKK+FPFRDQ
Sbjct: 299 IIHYNPKDFDFGKKKSFPFRDQ 320

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388497252|gb|AFK36692.1| unknown [Medicago truncatula]

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 235/262 (89%), Positives = 252/262 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSR LVKEGHQVTLFTRGKAPI QQLPGESD +FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPILDALPNLEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEI 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
           GSGIQ+TQLGHVKDLA AF++VLGNEKAS+Q+FNISG+KYVTFDGLARACAKA GFPEPE
Sbjct: 239 GSGIQITQLGHVKDLATAFLKVLGNEKASKQIFNISGDKYVTFDGLARACAKAGGFPEPE 298

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ 262
           ++HYNPK+FDFGKKK+FPFRDQ
Sbjct: 299 IIHYNPKDFDFGKKKSFPFRDQ 320

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489564|gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 236/262 (90%), Positives = 254/262 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI QQLPGESDQ++++FSSKILHLKGDRKD
Sbjct: 60  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQDYSDFSSKILHLKGDRKD 119

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           ++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAKAAGFPEPE
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPE 299

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ 262
           +VHYNPK+FDFGKKKAFPFRDQ
Sbjct: 300 IVHYNPKDFDFGKKKAFPFRDQ 321

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15217485|ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana] gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName: Full=Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic; Short=CSP41-b; AltName: Full=Heteroglycan-interacting protein 1.3; AltName: Full=Protein CHLOROPLAST RNA BINDING; AltName: Full=Protein Gb5f; Flags: Precursor gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340 [Arabidopsis thaliana] gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6 [Arabidopsis thaliana] gi|4337177|gb|AAD18098.1| Identical to gb|Y10557 g5bf gene from Arabidopsis thaliana. ESTs gb|R30578, gb|R90475, gb|T22384, gb|T22425, gb|N64934 and gb|T46767 come from this gene [Arabidopsis thaliana] gi|14334754|gb|AAK59555.1| putative RNA-binding protein [Arabidopsis thaliana] gi|17979099|gb|AAL47493.1| putative RNA-binding protein [Arabidopsis thaliana] gi|332190310|gb|AEE28431.1| RNA binding protein [Arabidopsis thaliana]

 Score =  502 bits (1293), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 232/262 (88%), Positives = 254/262 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAKA GFPEPE
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPE 298

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ 262
           +VHYNPKEFDFGKKKAFPFRDQ
Sbjct: 299 IVHYNPKEFDFGKKKAFPFRDQ 320

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3850621|emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana]

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 232/262 (88%), Positives = 254/262 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 55  MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 114

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 115 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 174

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 175 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 234

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAKA GFPEPE
Sbjct: 235 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPE 294

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ 262
           +VHYNPKEFDFGKKKAFPFRDQ
Sbjct: 295 IVHYNPKEFDFGKKKAFPFRDQ 316

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388512335|gb|AFK44229.1| unknown [Medicago truncatula]

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 234/262 (89%), Positives = 251/262 (95%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSR LVKEGHQVTLFTRGKAPI QQLPGESD +FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPILDALPNLEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEI 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
           GSGIQ+TQLGHVKDLA AF++VLGNEKAS+Q+FNISG+KYVTFDGLARAC KA GFPEPE
Sbjct: 239 GSGIQITQLGHVKDLATAFLKVLGNEKASKQIFNISGDKYVTFDGLARACVKAGGFPEPE 298

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ 262
           ++HYNPK+FDFGKKK+FPFRDQ
Sbjct: 299 IIHYNPKDFDFGKKKSFPFRDQ 320

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124986|ref|XP_002319474.1| predicted protein [Populus trichocarpa] gi|222857850|gb|EEE95397.1| predicted protein [Populus trichocarpa]

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 236/262 (90%), Positives = 253/262 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q LPGESDQ++A+FSSKILHLKGDRKD
Sbjct: 60  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKD 119

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           ++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAKAAGFPEPE
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPE 299

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ 262
           +VHYNPK+FDFGKKKAFPFRDQ
Sbjct: 300 IVHYNPKDFDFGKKKAFPFRDQ 321

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	287
TAIR|locus:2203028	378	CRB "chloroplast RNA binding"	0.912	0.693	0.885	5.7e-130
TAIR|locus:2099222	406	CSP41A "AT3G63140" [Arabidopsi	0.878	0.620	0.367	4.8e-39
TIGR_CMR|GSU_0385	294	GSU_0385 "NADH dehydrogenase s	0.362	0.353	0.259	6.2e-05
TAIR|locus:2025192	310	AT1G75280 [Arabidopsis thalian	0.463	0.429	0.287	7.8e-05
UNIPROTKB|Q83DM2	301	CBU_0681 "NAD dependent epimer	0.543	0.518	0.287	9.4e-05
TIGR_CMR|CBU_0681	301	CBU_0681 "conserved hypothetic	0.543	0.518	0.287	9.4e-05
UNIPROTKB|Q71YS4	291	LMOf2365_1769 "Putative unchar	0.832	0.821	0.251	0.00025
UNIPROTKB|Q81JK7	292	BA_5697 "Uncharacterized prote	0.334	0.328	0.318	0.00026
TIGR_CMR|BA_5697	292	BA_5697 "conserved hypothetica	0.334	0.328	0.318	0.00026
DICTYBASE|DDB_G0281487	349	DDB_G0281487 "3-beta-hydroxyst	0.567	0.467	0.252	0.00047

TAIR|locus:2203028 CRB "chloroplast RNA binding" [Arabidopsis thaliana (taxid:3702)]

 Score = 1275 (453.9 bits), Expect = 5.7e-130, P = 5.7e-130
 Identities = 232/262 (88%), Positives = 254/262 (96%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct:    59 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
             YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct:   119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query:   121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
             D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct:   179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query:   181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
              SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAKA GFPEPE
Sbjct:   239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPE 298

Query:   241 LVHYNPKEFDFGKKKAFPFRDQ 262
             +VHYNPKEFDFGKKKAFPFRDQ
Sbjct:   299 IVHYNPKEFDFGKKKAFPFRDQ 320

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0003723 "RNA binding" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0042631 "cellular response to water deprivation" evidence=IEP

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0042742 "defense response to bacterium" evidence=IEP;RCA

GO:0016020 "membrane" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP;IMP

GO:0009658 "chloroplast organization" evidence=IMP

GO:0005777 "peroxisome" evidence=IDA

GO:0005840 "ribosome" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0005996 "monosaccharide metabolic process" evidence=IMP

GO:0010297 "heteropolysaccharide binding" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042793 "transcription from plastid promoter" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2099222 CSP41A "AT3G63140" [Arabidopsis thaliana (taxid:3702)]

 Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 97/264 (36%), Positives = 144/264 (54%)

Query:     2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD 60
             GG   IG + ++ L+  GH VT+ T G    ++++       F+E  S     + G+  +
Sbjct:    90 GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSGGGKTVWGNPAN 148

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
                V + +  + FDVV D NG++ D V P++D   +  ++QF++ SSAG+Y  ++  PH 
Sbjct:   149 ---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHV 205

Query:   119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
             E D V   + H   +  E  L     NW S RP Y+ G  N    EEWFF R+   R +P
Sbjct:   206 EGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVP 262

Query:   179 IPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKAAGFP 237
             IPGSG+Q+T + HV+DL+      + N E AS  +FN   ++ VT DG+A+ CA AAG  
Sbjct:   263 IPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-K 321

Query:   238 EPELVHYNPKEFDFGKKKAFPFRD 261
               E+VHY+PK      KKAF FR+
Sbjct:   322 TVEIVHYDPKAIGVDAKKAFLFRN 345

GO:0003729 "mRNA binding" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0008266 "poly(U) RNA binding" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

TIGR_CMR|GSU_0385 GSU_0385 "NADH dehydrogenase subunit, putative" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 104 (41.7 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
 Identities = 28/108 (25%), Positives = 46/108 (42%)

Query:   129 HKGKLNTESVLESKGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVT 187
             H+ K   E V+    ++WT  RP  I+GP   +  +   F  R  A   +P+ G G    
Sbjct:   122 HRTKWRAEEVVRQSELDWTIFRPSLIFGPKGAFVDMLAGFVRRFPA---VPVVGDGTYRL 178

Query:   188 QLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG 235
             Q   V D+AR F   L   +   Q + + G   +T++ +     +  G
Sbjct:   179 QPVSVDDVARCFALALDMPETFGQTYELCGPDRLTYNEVLDIIGRVLG 226

GO:0003954 "NADH dehydrogenase activity" evidence=ISS

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=ISS

TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 7.8e-05, P = 7.8e-05
 Identities = 44/153 (28%), Positives = 75/153 (49%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGT +IG FL     K GH      R +A ++  + G++ Q F +    ILH  GD  D
Sbjct:    11 IGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTILH--GDLND 67

Query:    61 YDFVKSSLSAKGFDVVYDING--READEVEPILDALP---NLEQFIYCSSAGVYLKSDLL 115
             ++ +  ++  K  DVV    G  +  D+ + I+ A+    N+++F+  S  GV +     
Sbjct:    68 HESLVKAI--KQVDVVISTVGSMQILDQTK-IISAIKEAGNVKRFLP-SEFGVDVD---- 119

Query:   116 PHCETDTVDP-KSRHKGKLNTESVLESKGVNWT 147
                 T  V+P KS   GK+     +E++G+ +T
Sbjct:   120 ---RTSAVEPAKSAFAGKIQIRRTIEAEGIPYT 149

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

UNIPROTKB|Q83DM2 CBU_0681 "NAD dependent epimerase/dehydratase family" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 119 (46.9 bits), Expect = 9.4e-05, P = 9.4e-05
 Identities = 52/181 (28%), Positives = 78/181 (43%)

Query:    97 LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRP 151
             ++Q IY SS  VY  SD  P  ET    P S H       ++  +SV     ++   LRP
Sbjct:   101 IQQVIYISSDAVYADSDQ-PLTETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAILRP 159

Query:   152 VYIYG---PLN-YNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
               +YG   P N Y P     F RL      I + G G +     ++ D+A    +V+  +
Sbjct:   160 SLLYGAEDPHNGYGPNR---FRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVI--Q 214

Query:   207 KASRQVFNISGEKYVTFDGLARACAKAAGF-----PEPE---LVHYNPKEFDFGK-KKAF 257
             + SR V NI+  + ++F  LA    + +       P P    + H   + FD    +KAF
Sbjct:   215 RCSRGVLNIATGQVISFKQLAEKVVQLSNNEVAIQPSPRQGSMPHNGYRPFDITDCQKAF 274

Query:   258 P 258
             P
Sbjct:   275 P 275

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CBU_0681 CBU_0681 "conserved hypothetical protein" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 119 (46.9 bits), Expect = 9.4e-05, P = 9.4e-05
 Identities = 52/181 (28%), Positives = 78/181 (43%)

Query:    97 LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRP 151
             ++Q IY SS  VY  SD  P  ET    P S H       ++  +SV     ++   LRP
Sbjct:   101 IQQVIYISSDAVYADSDQ-PLTETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAILRP 159

Query:   152 VYIYG---PLN-YNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
               +YG   P N Y P     F RL      I + G G +     ++ D+A    +V+  +
Sbjct:   160 SLLYGAEDPHNGYGPNR---FRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVI--Q 214

Query:   207 KASRQVFNISGEKYVTFDGLARACAKAAGF-----PEPE---LVHYNPKEFDFGK-KKAF 257
             + SR V NI+  + ++F  LA    + +       P P    + H   + FD    +KAF
Sbjct:   215 RCSRGVLNIATGQVISFKQLAEKVVQLSNNEVAIQPSPRQGSMPHNGYRPFDITDCQKAF 274

Query:   258 P 258
             P
Sbjct:   275 P 275

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q71YS4 LMOf2365_1769 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)]

 Score = 115 (45.5 bits), Expect = 0.00025, P = 0.00025
 Identities = 68/270 (25%), Positives = 115/270 (42%)

Query:     2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
             GGTRF G  L   LV EGH+VT+ TRGK          ++  F +   +++ L  + +D 
Sbjct:     7 GGTRFFGKKLVERLVSEGHEVTIGTRGK----------TEDNFGDTVKRVI-LNRESRDA 55

Query:    62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-LEQFIYCSSAGVY-------LKSD 113
              F    L+ + +DV+YD       E    +DA    ++++IY SS  VY       +++D
Sbjct:    56 LF---QLAKEDWDVIYDNICFSPKEALYAVDAFKGKVKRYIYTSSLSVYSQKGRALVEAD 112

Query:   114 LLP-HCETDTVDPKSRH--KGKLNTESVLESKG-VNWTSLRPVYIYGPLNYNPVEEWFFH 169
               P H E    D +     +GK   E+V   K      ++R   + G  +Y     +  +
Sbjct:   113 FNPEHYEIVIGDKEDFDYGEGKRLAEAVFFQKASFPVVAVRFPIVLGLDDYTKRLHFHIN 172

Query:   170 RLKAGRPIPIPGSGIQVTQLGHV-KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLAR 228
              +K  + I I  S  Q  ++G +  D A  F++ +G E       N +       +G  +
Sbjct:   173 HIKNHQEIGI--SNGQA-EIGFITSDEAAHFLEWVGVESDLTGPVNATSNGTYALNGFIK 229

Query:   229 ACAKAAG-FPEPELVHYNPKEFDFGKKKAF 257
                +  G     E V  +  +  FG +K +
Sbjct:   230 MLEEKIGKLALVEEVTDDVDDSPFGIEKTY 259

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q81JK7 BA_5697 "Uncharacterized protein" [Bacillus anthracis (taxid:1392)]

 Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
 Identities = 35/110 (31%), Positives = 52/110 (47%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGTRF G  L   L+K+GH VT+ TRG   I +            F   +  L  DR+D
Sbjct:     9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
                + S L  K +D+VYD     ++  + + + L     ++I  SS  VY
Sbjct:    56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_5697 BA_5697 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
 Identities = 35/110 (31%), Positives = 52/110 (47%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGTRF G  L   L+K+GH VT+ TRG   I +            F   +  L  DR+D
Sbjct:     9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
                + S L  K +D+VYD     ++  + + + L     ++I  SS  VY
Sbjct:    56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0281487 DDB_G0281487 "3-beta-hydroxysteroid dehydrogenase" [Dictyostelium discoideum (taxid:44689)]

 Score = 114 (45.2 bits), Expect = 0.00047, P = 0.00047
 Identities = 47/186 (25%), Positives = 87/186 (46%)

Query:    72 GFDVVYDIN--GREADEVEPILDALPNLEQFIYCSSAGVYLKS-DLLPHCET----DT-V 123
             G+D+ Y +N  G E   +E  +     ++Q +Y SS+ V     D++   ET    D  +
Sbjct:    78 GYDIYYSVNVIGTER-LIEACIKC--GVKQLVYTSSSSVVFNGKDIVNGDETLPYVDKHI 134

Query:   124 DPKSRHKGKLNTESVLESKGVNWT--SLRPVYIYGPLNYNPVEEW--FFHRLKAGRPIPI 179
             DP ++ K +L   +VL++KG N    +LRP  I+GP     V+ W  F    K G+   +
Sbjct:   135 DPYNKTK-ELGERAVLKAKGSNLLVCALRPAGIFGP---REVQGWPQFLKAAKEGKNKFM 190

Query:   180 PGSGIQVTQLGHVKDLARAFV----QVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG 235
              G G  +    ++ ++  A +     +  N   S  V+ I+ ++ + F  +     +A G
Sbjct:   191 FGDGNNLCDWTYIDNVVHAHILAADNMTTNSPISGSVYFITNDEPIPFWDMPIFAYEAFG 250

Query:   236 FPEPEL 241
             +  P++
Sbjct:   251 YERPKM 256

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SA52	CP41B_ARATH	No assigned EC number	0.8854	0.9128	0.6931	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	CRB	CRB (CHLOROPLAST RNA BINDING); binding / catalytic/ coenzyme binding; Encodes CHLOROPLAST RNA BINDING (CRB), a putative RNA-binding protein. CRB is important for the proper functioning of the chloroplast. Mutations in CRB also affects the circadian system, altering the expression of both oscillator and output genes. (378 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	CSP41A	CSP41A (CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA); mRNA binding / poly(U) binding; Encod [...] (406 aa)			•	•	•		•	•	0.991
	SBPASE	SBPASE (sedoheptulose-bisphosphatase); phosphoric ester hydrolase/ sedoheptulose-bisphosphatase [...] (393 aa)				•			•		0.950
	PRK	PRK (PHOSPHORIBULOKINASE); ATP binding / phosphoribulokinase/ protein binding; PHOSPHORIBULOKIN [...] (395 aa)				•			•		0.948
	AT3G47070	unknown protein; unknown protein; LOCATED IN- thylakoid, chloroplast thylakoid membrane, chloro [...] (100 aa)				•					0.936
	TRXF1	TRXF1 (THIOREDOXIN F-TYPE 1); enzyme activator; THIOREDOXIN F-TYPE 1 (TRXF1); FUNCTIONS IN- enz [...] (178 aa)				•					0.936
	AT1G55480	binding / protein binding; binding / protein binding; FUNCTIONS IN- protein binding, binding; L [...] (335 aa)				•					0.936
	PETC	PETC (PHOTOSYNTHETIC ELECTRON TRANSFER C); electron transporter, transferring electrons from cy [...] (229 aa)				•					0.935
	FBP	fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putativ [...] (417 aa)				•					0.935
	NPQ4	NPQ4 (NONPHOTOCHEMICAL QUENCHING); chlorophyll binding / xanthophyll binding; Encoding PSII-S ( [...] (265 aa)				•			•		0.934
	FNR1	FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1); NADPH dehydrogenase/ electron transporter, transfer [...] (360 aa)				•					0.933

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	287
PLN00016	378	PLN00016, PLN00016, RNA-binding protein; Provision	1e-164
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	5e-97
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-24
cd08946	200	cd08946, SDR_e, extended (e) SDRs	1e-22
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	8e-20
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	8e-18
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	3e-16
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	1e-14
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	1e-11
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	1e-11
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	9e-11
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	3e-10
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	2e-09
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	5e-09
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	6e-09
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	6e-09
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	8e-09
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	2e-08
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	3e-08
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	3e-08
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	1e-07
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	6e-07
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	9e-07
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	2e-06
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	2e-06
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	6e-06
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	7e-06
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	2e-05
PLN02725	306	PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-	5e-05
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	6e-05
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	2e-04
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	3e-04
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	0.001
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	0.001
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	0.002
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	0.002
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	0.002
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	0.002
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	0.003
cd03802	335	cd03802, GT1_AviGT4_like, This family is most clos	0.003

>gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional

 Score =  459 bits (1183), Expect = e-164
 Identities = 156/264 (59%), Positives = 188/264 (71%), Gaps = 11/264 (4%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKD 60
           GG  FIG +L++ LVK GH+VTLFTRGK P +Q++  E    F+E SS  +  + GD  D
Sbjct: 63  GGHAFIGFYLAKELVKAGHEVTLFTRGKEP-SQKMKKEPFSRFSELSSAGVKTVWGDPAD 121

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDAL--PNLEQFIYCSSAGVYLKSDLLPHC 118
              VKS ++  GFDVVYD NG++ DEVEP+ D    P L+QF++CSSAGVY KSD  PH 
Sbjct: 122 ---VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHV 178

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
           E D V PK+   G L  E+ L+  GVNWTS RP YIYGP N    EEWFF RL  GRP+P
Sbjct: 179 EGDAVKPKA---GHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVP 235

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE 238
           IPGSGIQ+TQLGHVKDLA  F  V+GN KA+ Q+FNI  ++ VTFDG+A+ACAKAAGFP 
Sbjct: 236 IPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFP- 294

Query: 239 PELVHYNPKEFDFGKKKAFPFRDQ 262
            E+VHY+PK   FG KKAFPFRDQ
Sbjct: 295 EEIVHYDPKAVGFGAKKAFPFRDQ 318

Length = 378

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score =  285 bits (731), Expect = 5e-97
 Identities = 104/259 (40%), Positives = 133/259 (51%), Gaps = 24/259 (9%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           +GGTRFIG  L   L+  GH VT+F RG+                     + H+ GDR D
Sbjct: 6   IGGTRFIGKALVEELLAAGHDVTVFNRGRTKPD-------------LPEGVEHIVGDRND 52

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDAL-PNLEQFIYCSSAGVYLKS-----DL 114
            D ++  L  + FDVV D       +VE  LDA    ++Q+I+ SSA VYLK      + 
Sbjct: 53  RDALEELLGGEDFDVVVDTIAYTPRQVERALDAFKGRVKQYIFISSASVYLKPGRVITES 112

Query: 115 LPHCETDTV---DPKSRHKGKLNTESVLESK-GVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
            P  E D V   DP    +GK   E VL       +T +RP YIYGP +Y     +FF R
Sbjct: 113 TPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRPPYIYGPGDYTGRLAYFFDR 172

Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC 230
           L  GRPI +PG G  + Q  HVKDLARA +   GN KA   +FNI+G++ VT+D L  AC
Sbjct: 173 LARGRPILVPGDGHSLVQFIHVKDLARALLGAAGNPKAIGGIFNITGDEAVTWDELLEAC 232

Query: 231 AKAAGFPEPELVHYNPKEF 249
           AKA G  E E+VH      
Sbjct: 233 AKALGK-EAEIVHVEEDFL 250

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  100 bits (249), Expect = 2e-24
 Identities = 65/275 (23%), Positives = 95/275 (34%), Gaps = 47/275 (17%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
            GG  FIG  L   L+  GH V    R +  +   L G            +  +  D  D
Sbjct: 6   TGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSG------------VEFVVLDLTD 53

Query: 61  YDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNL---------------EQFI 101
            D V         D V       +  +++  +P      N+               ++F+
Sbjct: 54  RDLVDELAKGVP-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFV 112

Query: 102 YCSSAGVYLKSDLLPHCETDTVDPKSR---HKGKLNTESVLES----KGVNWTSLRPVYI 154
           + SS  V          + D   P+        KL  E +L +     G+    LRP  +
Sbjct: 113 FASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNV 172

Query: 155 YGPLNYNPVEEWFFHRL-----KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209
           YGP +   +             K    I I G G Q     +V D+A A +  L  E   
Sbjct: 173 YGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLAL--ENPD 230

Query: 210 RQVFNI-SGEKYVTFDGLARACAKAAGFPEPELVH 243
             VFNI SG   +T   LA A A+A G   P +V+
Sbjct: 231 GGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVY 265

Length = 314

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 92.0 bits (229), Expect = 1e-22
 Identities = 60/225 (26%), Positives = 85/225 (37%), Gaps = 39/225 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L R L++ GH+V +  R                       ++HL       
Sbjct: 5   GGAGFIGSHLVRRLLERGHEVVVIDRLDV--------------------VVHLAALVGV- 43

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE 119
                  S    D  ++ N         +L+A     +++F+Y SSA VY   + LP  E
Sbjct: 44  -----PASWDNPDEDFETN---VVGTLNLLEAARKAGVKRFVYASSASVYGSPEGLPEEE 95

Query: 120 TDTVDPKS-RHKGKLNTESVLES----KGVNWTSLRPVYIYGP---LNYNPVEEWFFHRL 171
                P S     KL  E +L S     G+    LR   +YGP      + V   F  R 
Sbjct: 96  ETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPRLDGVVNDFIRRA 155

Query: 172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
             G+P+ + G G Q     HV D+ RA +  L N      V+NI 
Sbjct: 156 LEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGGGVYNIG 200

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 85.4 bits (212), Expect = 8e-20
 Identities = 57/241 (23%), Positives = 95/241 (39%), Gaps = 40/241 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT FIG  L R L++EG++V +  R +   +                 I   +GD  D 
Sbjct: 5   GGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGR------------IRFHEGDLTDP 52

Query: 62  DFVKSSLSAKGFDVVY--------DINGREADE--------VEPILDALP--NLEQFIYC 103
           D ++  L+    D V           +  +  +           +L+A     +++F++ 
Sbjct: 53  DALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFA 112

Query: 104 SSAGVYLKSDLLPHCETDTVDPKS---RHK--GKLNTESVLESKGVNWTSLRPVYIYGPL 158
           SS+ VY      P  E   + P S     K   +   E+   + G+    LR   +YGP 
Sbjct: 113 SSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYGPG 172

Query: 159 NYNPVEE----WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN 214
           N +P           R+  G+PI + G G Q     +V D+ARA +  L +      ++N
Sbjct: 173 NPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHPDGGE-IYN 231

Query: 215 I 215
           I
Sbjct: 232 I 232

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 81.2 bits (201), Expect = 8e-18
 Identities = 68/250 (27%), Positives = 100/250 (40%), Gaps = 48/250 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L   L++EG QV +F R   P    L G       ++       KGD ++ 
Sbjct: 6   GGNGFIGSHLVDALLEEGPQVRVFDRSIPPYELPLGG------VDYI------KGDYENR 53

Query: 62  DFVKSSLSAKG--FDVVYDINGREADEVEPILDALPNL---------------EQFIYCS 104
             ++S+L        +    N   +    PILD   N+                + I+ S
Sbjct: 54  ADLESALVGIDTVIHLASTTNPATS-NKNPILDIQTNVAPTVQLLEACAAAGIGKIIFAS 112

Query: 105 SAG-VYLKSDLLPHCETDTVDPKSRHK-GKLNTESVLE----SKGVNWTSLRPVYIYGPL 158
           S G VY   + LP  E+D   P S +   KL  E  L       G+++T LR    YGP 
Sbjct: 113 SGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYTVLRISNPYGPG 172

Query: 159 NYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ 211
                     P+     +++  G PI I G G  +    ++ DL  A + +L ++     
Sbjct: 173 QRPDGKQGVIPI---ALNKILRGEPIEIWGDGESIRDYIYIDDLVEALMALLRSKGLEE- 228

Query: 212 VFNI-SGEKY 220
           VFNI SG  Y
Sbjct: 229 VFNIGSGIGY 238

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 75.8 bits (187), Expect = 3e-16
 Identities = 71/257 (27%), Positives = 98/257 (38%), Gaps = 30/257 (11%)

Query: 6   FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
           ++G  L+R L+ +G QVT  TR    +A   P       A+     L   G   D D + 
Sbjct: 8   YLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAGVTPLAAD-----LTQPGLLADVDHLV 62

Query: 66  SSLSAKGFDVVYDINGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDLLPHC-ETD 121
            SL            G     +  +LDAL   P +++ IY SS GVY   D      +  
Sbjct: 63  ISLPPPA----GSYRGGYDPGLRALLDALAQLPAVQRVIYLSSTGVY--GDQQGEWVDET 116

Query: 122 TVDPKSRHKGK--LNTESVLESKG-VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
           +    S   G+  L  E  L + G    T LR   IYGP   +P+      RL  G    
Sbjct: 117 SPPNPSTESGRALLEAEQALLALGSKPTTILRLAGIYGP-GRHPLR-----RLAQG--TG 168

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE 238
            P +G   T   HV DL  A    L        V+N+  +  VT     +A A+  G P 
Sbjct: 169 RPPAGNAPTNRIHVDDLVGALAFALQRPAPGP-VYNVVDDLPVTRGEFYQAAAELLGLPP 227

Query: 239 PELVHYNPKEFDFGKKK 255
           P  +   P  F    K+
Sbjct: 228 PPFI---PFAFLREGKR 241

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 71.9 bits (177), Expect = 1e-14
 Identities = 63/295 (21%), Positives = 103/295 (34%), Gaps = 58/295 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP-GESDQEFAEFSSKILHLKGDRKD 60
           G T FIG ++   L K G QV +  R +A   + L  G+  Q        +L ++ D +D
Sbjct: 7   GATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQ--------VLFVEFDLRD 58

Query: 61  YDFVKSSLSAKGFDVVYDINGRE----ADEVEPILDALP----------NLEQFIYCSSA 106
            + ++ +L  +G DVV ++ GR         E +    P           +E+ I+ S+ 
Sbjct: 59  DESIRKAL--EGSDVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHISAL 116

Query: 107 GVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEW 166
           G             D   P    + K   E  +       T +RP  ++G  +       
Sbjct: 117 GA------------DANSPSKYLRSKAEGEEAVREAFPEATIVRPSVVFGREDR------ 158

Query: 167 FFHRLKAGR---P-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 222
           F +R        P  P+ G G    Q  +V D+A A  + L + +   + + + G K  T
Sbjct: 159 FLNRFAKLLAFLPFPPLIGGGQTKFQPVYVGDVAEAIARALKDPETEGKTYELVGPKVYT 218

Query: 223 FDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPF---------RDQLRRQSM 268
              L     +  G      V   P        +             RDQL R   
Sbjct: 219 LAELVELLRRLGGRKRR--VLPLPLWLARLIARVKLLLLLPEPPLTRDQLERLKT 271

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 44/208 (21%), Positives = 72/208 (34%), Gaps = 38/208 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  L + L+  GHQVT  +R  +                 +  +  ++ D  D 
Sbjct: 5   GATGKTGRRLVKELLARGHQVTALSRNPSKAP--------------APGVTPVQKDLFDL 50

Query: 62  DFVKSSLSAKGFDVVYD-INGREADE--VEPILDALPNL--EQFIYCSSAGVY-LKSDLL 115
             +  +L   G D V D    R  D   V+ +LDA       + +  S+AG+Y  +    
Sbjct: 51  ADLAEAL--AGVDAVVDAFGARPDDSDGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTF 108

Query: 116 PHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR 175
              +     P +R K     E +L + G++WT +RP  ++        E           
Sbjct: 109 RLDDAPLFPPYARAKAAA--EELLRASGLDWTIVRPGALFDE-EGETYEIGTEGDPAGES 165

Query: 176 PIPIPGSGIQVTQLGHVKDLARAFVQVL 203
            I                D+A A +  L
Sbjct: 166 SI-------------SRADVAAALLDEL 180

Length = 182

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 63.6 bits (155), Expect = 1e-11
 Identities = 66/265 (24%), Positives = 103/265 (38%), Gaps = 44/265 (16%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           GG+ F G  L + L++  G  V  F       A       + EF         LKGD  D
Sbjct: 6   GGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPNIEF---------LKGDITD 56

Query: 61  YDFVKSSLSAKGFDVVYDI-------NGRE-ADEV-----EPILDALP--NLEQFIYCSS 105
            + V+ +LS  G D V+           R+   EV     + +LDA     +++F+Y SS
Sbjct: 57  RNDVEQALS--GADCVFHTAAIVPLAGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTSS 114

Query: 106 AGVYLKSDL-------LPHCETDTVDPKSRHKGKLNTESVLESKGVN---WTSLRPVYIY 155
           + V             LP+   D+ D  +  K  +    VLE+ G +     +LRP  I+
Sbjct: 115 SSVIFGGQNIHNGDETLPYPPLDS-DMYAETK-AIAEIIVLEANGRDDLLTCALRPAGIF 172

Query: 156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV----LGNEKASRQ 211
           GP     +    F   + G    + G G  +    +V +LA A +      +  +  S Q
Sbjct: 173 GP-GDQGLVPILFEWAEKGLVKFVFGRGNNLVDFTYVHNLAHAHILAAAALVKGKTISGQ 231

Query: 212 VFNISGEKYVTFDGLARACAKAAGF 236
            + I+  +      L R   KA GF
Sbjct: 232 TYFITDAEPHNMFELLRPVWKALGF 256

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 61.1 bits (149), Expect = 9e-11
 Identities = 72/285 (25%), Positives = 106/285 (37%), Gaps = 56/285 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  L   L++ GH+V +    + GK    + LP        E    +  ++GD 
Sbjct: 6   GGAGFIGSHLVERLLERGHEVIVLDNLSTGKK---ENLP--------EVKPNVKFIEGDI 54

Query: 59  KDYDFVKSSLS--------AKGFDVVYDINGREADEVEPILDALPN-------------- 96
           +D + V+ +          A    V   I        +PI D   N              
Sbjct: 55  RDDELVEFAFEGVDYVFHQAAQASVPRSIE-------DPIKDHEVNVLGTLNLLEAARKA 107

Query: 97  -LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK-GKLNTESVL----ESKGVNWTSLR 150
            +++F+Y SS+ VY     LP  E    +P S +   K   E          G+   SLR
Sbjct: 108 GVKRFVYASSSSVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYCQVFARLYGLPTVSLR 167

Query: 151 PVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN 205
              +YGP       Y  V   F  R   G P  I G G Q     +V+D+  A +     
Sbjct: 168 YFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANLLAA-T 226

Query: 206 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD 250
             A  +V+NI   K  + + LA    +  G  E E V+  P+  D
Sbjct: 227 AGAGGEVYNIGTGKRTSVNELAELIREILG-KELEPVYAPPRPGD 270

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 59.1 bits (143), Expect = 3e-10
 Identities = 51/242 (21%), Positives = 78/242 (32%), Gaps = 33/242 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKD 60
           G T F+G  + R L+  GH+V    R     A  L G  +    +    K L       D
Sbjct: 7   GATGFVGGAVVRELLARGHEVRAAVRNPEA-AAALAGGVEVVLGDLRDPKSLVAGAKGVD 65

Query: 61  YDFVKSSLSAKG-----FDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLL 115
              + S L           V   +   EA        A   ++  +  S  G        
Sbjct: 66  GVLLISGLLDGSDAFRAVQVTAVVRAAEA--------AGAGVKHGVSLSVLGA------- 110

Query: 116 PHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR 175
                D   P +  + K   E+ L S G+ +T+LR    Y          +      AG 
Sbjct: 111 -----DAASPSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGA----AFIEAAEAAGL 161

Query: 176 PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG 235
           P+   G G        V D+A A    L     + + + ++G + +T   LA       G
Sbjct: 162 PVIPRGIG--RLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIG 219

Query: 236 FP 237
            P
Sbjct: 220 RP 221

Length = 275

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 53/245 (21%), Positives = 89/245 (36%), Gaps = 48/245 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G  +  LL+ +   V    R           E  + FA    ++        DY
Sbjct: 5   GATGKLGTAVVELLLAKVASVVALVRN---------PEKAKAFAADGVEVRQG-----DY 50

Query: 62  DFVKSSLSA-KGFDVVY----DINGREADEVEPILDALPNLEQFIYCSSAGV----YLKS 112
           D  ++   A +G D +             + +  +DA            AGV    YL  
Sbjct: 51  DDPETLERAFEGVDRLLLISPSDLEDRIQQHKNFIDA---------AKQAGVKHIVYLS- 100

Query: 113 DLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK 172
                 + D+    +R  G   TE  LE+ G+ +T LRP +    L      E+    L+
Sbjct: 101 --ASGADEDSPFLLARDHGA--TEKYLEASGIPYTILRPGWFMDNLL-----EFLPSILE 151

Query: 173 AGRPIPIPGSGIQVTQLGHV--KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC 230
            G      G G     +  V  +D+A A    L       +V+N++G + +++  LA   
Sbjct: 152 EGTIYGPAGDGK----VAFVDRRDIAEAAAAALTEPGHEGKVYNLTGPEALSYAELAAIL 207

Query: 231 AKAAG 235
           ++A G
Sbjct: 208 SEALG 212

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 55.8 bits (135), Expect = 5e-09
 Identities = 54/262 (20%), Positives = 88/262 (33%), Gaps = 60/262 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L+  L++EGH+V       +  +  L   +  +   F      + GD +D 
Sbjct: 6   GADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHF------ISGDVRDA 59

Query: 62  DFVKSSLSAKGFDVVY---------DINGREADEVEPIL--DALP-------NLEQFIYC 103
             V+  +  K  DVV+                  VE  +               ++ ++ 
Sbjct: 60  SEVEYLV--KKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRVVHT 117

Query: 104 SSAGVYLKSDLLPHCETDTVD-------PKSRHKGKLN--TESVLESKGVNWTSLRPVYI 154
           S++ VY  +  +P  E   +        P S  K   +    S   S G+  T +RP   
Sbjct: 118 STSEVYGTAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRPFNT 177

Query: 155 YGPLNYNPVEEWFFHRLKAGRPIPIP-------------GSGIQVTQLGHVKDLARAFVQ 201
           YGP            R  A   IP               G G        VKD AR F+ 
Sbjct: 178 YGP------------RQSARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTARGFID 225

Query: 202 VLGNEKASRQVFNISGEKYVTF 223
           +L   +A  ++ N    + ++ 
Sbjct: 226 ILDAIEAVGEIINNGSGEEISI 247

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 55.6 bits (134), Expect = 6e-09
 Identities = 73/301 (24%), Positives = 113/301 (37%), Gaps = 52/301 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGES------------DQEFAE 46
           GG   IG  L   L++ GHQV +   F  G+       P  +            D+ F +
Sbjct: 7   GGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDHPNLTVVEGSIADKALVDKLFGD 66

Query: 47  FS-SKILHLKGDRKDYD-FVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCS 104
           F    ++H     KD D + + +L+    +VV   N  +A +          +++ IY  
Sbjct: 67  FKPDAVVHTAAAYKDPDDWYEDTLT----NVVGGANVVQAAKKA-------GVKRLIYFQ 115

Query: 105 SAGVY-LKSDLLP-HCETDTVDPKSRHK-GKLNTESVLESKGVNWTSLRPVYIYGPLNYN 161
           +A  Y LK    P   +     P S +   K   E  LE  GV++ + R   + GP N  
Sbjct: 116 TALCYGLKPMQQPIRLDHPRAPPGSSYAISKTAGEYYLELSGVDFVTFRLANVTGPRNVI 175

Query: 162 PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGEKY 220
                F+ RLKAG+   +  +         VKDLAR   + L +       ++  SGE  
Sbjct: 176 GPLPTFYQRLKAGKKCFVTDT---RRDFVFVKDLARVVDKAL-DGIRGHGAYHFSSGEDV 231

Query: 221 VT---FDGLARACAKAAGFPEPELVHYNPKEF------------DFGKKKAFPFRDQLRR 265
                FD +  A       PE E+V   P +             DFG K+  P  + +  
Sbjct: 232 SIKELFDAVVEALD-LPLRPEVEVVELGPDDVPSILLDPSRTFQDFGWKEFTPLSETVSA 290

Query: 266 Q 266
            
Sbjct: 291 A 291

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 54.5 bits (132), Expect = 6e-09
 Identities = 44/231 (19%), Positives = 75/231 (32%), Gaps = 46/231 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDR 58
           G T  +G  + R L+  G+QV    R  +   +     ++    +     S    L+G  
Sbjct: 6   GATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLAAALEG-- 63

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADE--VEPILDALP--NLEQFIYCSSAGVY----L 110
              D V S+  + G            D      ++DA     +++F+  SS G       
Sbjct: 64  --IDAVISAAGSGGKG---GPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSIGADKPSHP 118

Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
              L P+              K   E  L + G+++T +RP    G L  +P        
Sbjct: 119 LEALGPY-----------LDAKRKAEDYLRASGLDYTIVRP----GGLTDDPAGTGRVVL 163

Query: 171 LKAGRPI--PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
              G  +  PI  +           D+A    + L    A  + F + G  
Sbjct: 164 GGDGTRLDGPISRA-----------DVAEVLAEALDTPAAIGKTFELGGGD 203

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 53.6 bits (129), Expect = 8e-09
 Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 29/167 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T FIG  L+R L+++GH+VTL  R           + DQE           +GD +D 
Sbjct: 5   GATGFIGRALARELLEQGHEVTLLVRNTKR-----LSKEDQEPVAVV------EGDLRDL 53

Query: 62  DFVKSSLSAKGFDVVY-----DINGREADEVEP-----ILDALP--NLEQFIYCSSAGVY 109
           D +  ++  +G DVV        + R+  EV+      +L+A     ++ FI+ SS G Y
Sbjct: 54  DSLSDAV--QGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAY 111

Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYG 156
              DL    E     P    K K  TE+VL    + +T +RP  IYG
Sbjct: 112 --GDLHEETEPSPSSPYLAVKAK--TEAVLREASLPYTIVRPGVIYG 154

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 53/256 (20%), Positives = 88/256 (34%), Gaps = 39/256 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKD 60
           G T FIG  + R LV  GH+V    R            SD   A+  +      +GD +D
Sbjct: 7   GATGFIGSAVVRELVAAGHEVVGLAR------------SDAGAAKLEAAGAQVHRGDLED 54

Query: 61  YDFVKSSLSAK------GFDVVYDINGREADE----VEPILDALPNLEQ-FIYCSSAGVY 109
            D ++ + +         F   +D   +  +     +E + +AL    +  IY S   + 
Sbjct: 55  LDILRKAAAEADAVIHLAFTHDFDNFAQACEVDRRAIEALGEALRGTGKPLIYTSGIWLL 114

Query: 110 LKSDLLPHCETDTVDPKS---RHKGKLNTESVLESKGVNWTSLR-PVYIYGPLNYNPVEE 165
             +      E    DP +   R   +      L  +GV  + +R P     P+ +   + 
Sbjct: 115 GPTGGQEEDEEAPDDPPTPAARAVSEAAALE-LAERGVRASVVRLP-----PVVHGRGDH 168

Query: 166 WFF----HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV 221
            F        +        G G       H  D AR +   L   KA   V++   E+ +
Sbjct: 169 GFVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALEKGKA-GSVYHAVAEEGI 227

Query: 222 TFDGLARACAKAAGFP 237
               +A A  +  G P
Sbjct: 228 PVKDIAEAIGRRLGVP 243

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 53.7 bits (130), Expect = 3e-08
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 21/143 (14%)

Query: 136 ESVLESKGVNWTSLRPVYIYGP-LNYNPVEEWF-------FHRLKA--GRPIPIPGSGIQ 185
           E+  +  G ++ S+ P  +YGP  N++P            FH  K   G+ + + GSG  
Sbjct: 144 EAYRKQYGCDYISVMPTNLYGPHDNFDPENSHVIPALIRKFHEAKLRGGKEVTVWGSGTP 203

Query: 186 VTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYN 245
             +  +  DLARA V +L N      + N+     ++   LA A A+  GF + E+V ++
Sbjct: 204 RREFLYSDDLARAIVFLLENY-DEPIIVNVGSGVEISIRELAEAIAEVVGF-KGEIV-FD 260

Query: 246 P--------KEFDFGKKKAFPFR 260
                    K  D  K +A  + 
Sbjct: 261 TSKPDGQPRKLLDVSKLRALGWF 283

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 53.4 bits (129), Expect = 3e-08
 Identities = 56/272 (20%), Positives = 96/272 (35%), Gaps = 56/272 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T F+G  L R L+ +G++V    R  +  A  L G    E  E         GD  D 
Sbjct: 5   GATGFLGSNLVRALLAQGYRVRALVRSGSD-AVLLDGL-PVEVVE---------GDLTDA 53

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEPI-LDALPNL---------EQFIYCSS 105
             + +++  KG D V+       +  ++  E+    ++   N+          + ++ SS
Sbjct: 54  ASLAAAM--KGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHTSS 111

Query: 106 AGVY------LKSDLLPHCETDTVDPKSRHKGKLNTESVLE--SKGVNWTSLRPVYIYGP 157
                        +  P  E    +   R K  L    VLE  ++G++   + P  ++GP
Sbjct: 112 IAALGGPPDGRIDETTPWNERPFPNDYYRSK-LLAELEVLEAAAEGLDVVIVNPSAVFGP 170

Query: 158 LNYNPVEEWFFHRLKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
            +  P              +P  P  G        V+D+A   +  +  EK  R      
Sbjct: 171 GDEGPTSTGLDVLDYLNGKLPAYPPGGTSFV---DVRDVAEGHIAAM--EKGRR------ 219

Query: 217 GEKY------VTFDGLARACAKAAGFPEPELV 242
           GE+Y      ++F  L    A+  G   P   
Sbjct: 220 GERYILGGENLSFKQLFETLAEITGVKPPRRT 251

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 65/265 (24%), Positives = 98/265 (36%), Gaps = 44/265 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L   L+  G +V +  R           E     AE    I          
Sbjct: 6   GANGFIGRALVDKLLSRGEEVRIAVR------NAENAEPSVVLAELP-DIDSFTDLFLGV 58

Query: 62  DFVKSSLSAKGFDVVYDINGREAD------EVEPILD-------ALPNLEQFIYCSSAGV 108
           D V   L+A+    V+ +N + AD      +V   L        A   +++F++ SS  V
Sbjct: 59  DAV-VHLAAR----VHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVFLSSVKV 113

Query: 109 YLKSDL-LPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGP---LN 159
             +  +  P  ETD   P+  + + KL  E  L     S G+    LRP  +YGP    N
Sbjct: 114 NGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILRPPMVYGPGVRGN 173

Query: 160 YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
           +  +       +  G P+P PG+      L  + +L  A    +   KA+   F +S   
Sbjct: 174 FARLMRL----IDRGLPLP-PGAVKNRRSLVSLDNLVDAIYLCISLPKAANGTFLVSDGP 228

Query: 220 YVT----FDGLARACAKAA-GFPEP 239
            V+     D + RA  K     P P
Sbjct: 229 PVSTAELVDEIRRALGKPTRLLPVP 253

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 60/255 (23%), Positives = 98/255 (38%), Gaps = 39/255 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G +  IG  ++R L + G  V L +R G       LPG   +  A           D  D
Sbjct: 6   GASGPIGREVARELRRRGWDVRLVSRSGSKL--AWLPG--VEIVA----------ADAMD 51

Query: 61  YDFVKSSLSAKGFDVVYDING----READEVEPILD-----ALPNLEQFIYCSSAGVYLK 111
              V ++  A+G DV+Y        R  +   P+++     A  N  + +   +  +Y  
Sbjct: 52  ASSVIAA--ARGADVIYHCANPAYTRWEELFPPLMENVVAAAEANGAKLVLPGNVYMYGP 109

Query: 112 SDLLPHCETDTVDPKSRHKGKLN---TESVLES---KGVNWTSLRPVYIYGPLNYNPVEE 165
               P  E     P +R KG++     E +L +     +    +R    YGP   N    
Sbjct: 110 QAGSPITEDTPFQPTTR-KGRIRAEMEERLLAAHAKGDIRALIVRAPDFYGPGAINS--- 165

Query: 166 WFFHRLKA---GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 222
           W    L A   G+    PG+     +  ++ D+ARA V +     A  + +++ G   +T
Sbjct: 166 WLGAALFAILQGKTAVFPGNLDTPHEWTYLPDVARALVTLAEEPDAFGEAWHLPGAGAIT 225

Query: 223 FDGLARACAKAAGFP 237
              L    A+AAG P
Sbjct: 226 TRELIAIAARAAGRP 240

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 48.0 bits (115), Expect = 9e-07
 Identities = 47/242 (19%), Positives = 73/242 (30%), Gaps = 68/242 (28%)

Query: 2   GGTRFIGVFLSRLLVKE----GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           G T   G      +V+E    GH+VT   R  A +                 K+  ++GD
Sbjct: 6   GATGRTG----SAIVREALARGHEVTALVRDPAKL------------PAEHEKLKVVQGD 49

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEVEP---------ILDALPNLE--QFIYCSSA 106
             D + VK +L  +G D V    G   D             I+ A+      + I    A
Sbjct: 50  VLDLEDVKEAL--EGQDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGA 107

Query: 107 GVYLKSDLLPHCETDTVDPKSRHKGKLNT---ESVLESKGVNWTSLRP----------VY 153
           G       +       + P +  +   +      VL   G++WT++RP           Y
Sbjct: 108 GSLDDRPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRPPALFDGGATGGY 167

Query: 154 IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
               L  +                   GS I         DLA   +  L   +  R+  
Sbjct: 168 YRVELLVDAK----------------GGSRIS------RADLAIFMLDELETPEHVRKRP 205

Query: 214 NI 215
            I
Sbjct: 206 TI 207

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 38/173 (21%), Positives = 69/173 (39%), Gaps = 19/173 (10%)

Query: 116 PHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLK 172
           P+ E D  +P + + K KL  E  + +    +  LR  ++YG L    N VE W      
Sbjct: 115 PYKEEDAPNPLNVYGKSKLLGEVAVLNANPRYLILRTSWLYGELKNGENFVE-WMLRLAA 173

Query: 173 AGRPI----PIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS-RQVFNISGEKYVTFDGLA 227
             + +       GS        +  DLA A ++++  E+ S   ++++S    ++    A
Sbjct: 174 ERKEVNVVHDQIGSPT------YAADLADAILELI--ERNSLTGIYHLSNSGPISKYEFA 225

Query: 228 RACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWK 280
           +  A A G P+ E+      E+    ++  P    L    +   G +    WK
Sbjct: 226 KLIADALGLPDVEIKPITSSEYPLPARR--PANSSLDCSKLEELGGIKPPDWK 276

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 49/247 (19%), Positives = 92/247 (37%), Gaps = 44/247 (17%)

Query: 14  LLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG 72
           LL   G +V   TR   +P A+ L     +            +GD  D + ++++L  KG
Sbjct: 18  LLKDPGFKVRALTRDPSSPAAKALAAPGVEVV----------QGDLDDPESLEAAL--KG 65

Query: 73  FDVVY----DINGREADEVE---PILDAL--PNLEQFIYCSSAGVYLKSDLLPHCETDTV 123
              V+           DE+     ++DA     ++ F++ S   V   +  +PH      
Sbjct: 66  VYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAGVQHFVFSSVPDVEKLTLAVPH------ 119

Query: 124 DPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGS 182
                   K   E  + + G+  T LRP +       N +      +++ G   + +P  
Sbjct: 120 -----FDSKAEVEEYIRASGLPATILRPAFFM----ENFLTPPAPQKMEDGTLTLVLPLD 170

Query: 183 GIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPEL 241
                 +  V D+  A   +  +  K + +   ++G++  T + +A A +K  G P    
Sbjct: 171 PDTKLPMIDVADIGPAVAAIFKDPAKFNGKTIELAGDEL-TPEEIAAAFSKVLGKP---- 225

Query: 242 VHYNPKE 248
           V Y   E
Sbjct: 226 VTYVQVE 232

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 46.7 bits (111), Expect = 6e-06
 Identities = 62/286 (21%), Positives = 102/286 (35%), Gaps = 57/286 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L+  L  EGH V    RG A            +  EF         D ++ 
Sbjct: 7   GAGGFIGSHLAERLKAEGHYV----RG-ADWKSPEHMTQPTDDDEF------HLVDLREM 55

Query: 62  DFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN---------------LEQFIY 102
           +    +    G D V+    D+ G    +    +    N               +E+F++
Sbjct: 56  ENCLKATE--GVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVERFLF 113

Query: 103 CSSAGVY-----LKSDLLPHCETDTVDPKSRHKG----KLNTESVL----ESKGVNWTSL 149
            SSA VY     L++ ++   E D   P          KL TE +     E  G+    +
Sbjct: 114 ASSACVYPEFKQLETTVVRLREED-AWPAEPQDAYGWEKLATERLCQHYNEDYGIETRIV 172

Query: 150 RPVYIYGPL-NYNPVEEWFFHRL-------KAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201
           R   IYGP   ++   E     +       K G    I G G+Q     ++ D      +
Sbjct: 173 RFHNIYGPRGTWDGGREKAPAAMCRKVATAKDGDRFEIWGDGLQTRSFTYIDDCVEGLRR 232

Query: 202 VLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPK 247
           ++  E    +  N+  ++ V+ + LA      +G P  E++H+ P 
Sbjct: 233 LM--ESDFGEPVNLGSDEMVSMNELAEMVLSFSGKPL-EIIHHTPG 275

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 46.2 bits (110), Expect = 7e-06
 Identities = 41/177 (23%), Positives = 61/177 (34%), Gaps = 29/177 (16%)

Query: 97  LEQFIYCSSAGVY--LKSDLLPHCETDTVDPKSRHKG---KLNTESVLES-----KGVNW 146
           + + +  SS  VY     +  P  E   +           K   E +L         +N 
Sbjct: 102 VPRVVVTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNV 161

Query: 147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
           T LRP  I GP   N      F    + R +P+PG      Q  H  D+ARA   VL   
Sbjct: 162 TVLRPATILGPGTRN--TTRDF---LSPRRLPVPGGFDPPFQFLHEDDVARAL--VLAVR 214

Query: 207 KASRQVFNISGEKYVTFDGLARAC-AKAAGFPEP-----------ELVHYNPKEFDF 251
             +  +FN++G+  V    +      +    P P            L    P++ DF
Sbjct: 215 AGATGIFNVAGDGPVPLSLVLALLGRRPVPLPSPLPAALAAARRLGLRPLPPEQLDF 271

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 59/284 (20%), Positives = 102/284 (35%), Gaps = 49/284 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           GGT F+G  L + L++ G +V +  R ++   A +   E+  E          L+GD   
Sbjct: 5   GGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRV----LEGDLTQ 60

Query: 61  YDFVKSSLS-------AKGFDVV------YDING--READEV-----EPILDALPNLEQ- 99
            +     LS       A   D V      YD      +A        E +L+    L+  
Sbjct: 61  PNL---GLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDIQ 117

Query: 100 -FIYCSSAGVY-LKSDLLPHCETDTVDP------KSRHKGKLNTESVLESKGVNWTSLRP 151
            F Y S+A V   +   +   E +          +S+ + +    +   +  +  T  RP
Sbjct: 118 RFHYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKAEAEQLVRA--AATQIPLTVYRP 175

Query: 152 VYIYGPLN-------YNPVEEWFFHRL-KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
             + G              E    + L K GR +P+PG+      L  V  +A A V + 
Sbjct: 176 SIVVGDSKTGRIEKIDGLYE--LLNLLAKLGRWLPMPGNKGARLNLVPVDYVADAIVYLS 233

Query: 204 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPK 247
              +A+ Q+F+++     T   +A     A   P   ++  N  
Sbjct: 234 KKPEANGQIFHLTDPTPQTLREIADLFKSAFLSPGLLVLLMNEP 277

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

 Score = 43.5 bits (103), Expect = 5e-05
 Identities = 44/146 (30%), Positives = 57/146 (39%), Gaps = 24/146 (16%)

Query: 143 GVNWTSLRPVYIYGPLNYNPVEEWF--------FHRLKA-GRPIPIP-GSGIQVTQLGHV 192
           G +  S  P  +YGP +    E           FH  KA G P  +  GSG  + +  HV
Sbjct: 149 GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHV 208

Query: 193 KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFG 252
            DLA A V ++     +  V N+     VT   LA    +  GF E ELV      +D  
Sbjct: 209 DDLADAVVFLMRRYSGAEHV-NVGSGDEVTIKELAELVKEVVGF-EGELV------WDTS 260

Query: 253 KKKAFPFRDQLRRQSMCSDGNLSLTW 278
           K    P      R+ M S    SL W
Sbjct: 261 KPDGTP------RKLMDSSKLRSLGW 280

Length = 306

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 43.3 bits (103), Expect = 6e-05
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 140 ESKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195
            + G+     R    YGP  +     P+   F      G+P+PI G G+ V    +V+D 
Sbjct: 166 RTYGLPVVITRCSNNYGPYQFPEKLIPL---FILNALDGKPLPIYGDGLNVRDWLYVEDH 222

Query: 196 ARAFVQVLGNEKASRQVFNISGE 218
           ARA   VL  +    +++NI G 
Sbjct: 223 ARAIELVL-EKGRVGEIYNIGGG 244

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 28/134 (20%), Positives = 49/134 (36%), Gaps = 15/134 (11%)

Query: 116 PHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
           P+ E D   P +   + KL  E  + +       LR  ++YG    N V+          
Sbjct: 110 PYREDDPTGPLNVYGRTKLAGEQAVLAANPRHLILRTAWVYGEYGNNFVK-TMLRLAAER 168

Query: 175 RPIPIPGSGIQVT-QLG---HVKDLARAFVQVLG---NEKASRQVFNISGEKYVTFDGLA 227
             + +      V  QLG     +DLA A + ++       A    ++++G    ++   A
Sbjct: 169 DELRV------VDDQLGSPTSARDLADALLALIRKRLRGPALAGTYHLAGSGETSWYDFA 222

Query: 228 RACAKAAGFPEPEL 241
           RA    AG     +
Sbjct: 223 RAIFDEAGADGGRV 236

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 68/293 (23%), Positives = 96/293 (32%), Gaps = 97/293 (33%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT FIG  L++ L K GH+VT+ TR   P A     E  + +A   +  L         
Sbjct: 5   GGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTK-WEGYKPWAGEDADSL--------- 54

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILD------------------------ALPNL 97
                    +G D V ++ G      EPI D                        A+   
Sbjct: 55  ---------EGADAVINLAG------EPIADKRWTEERKQEIRDSRIDTTRLLVEAIAAA 99

Query: 98  EQ----FIYCSSAGVYLKSDLLPHCETDTVDPK-------------SRHKGKLNTES--- 137
           EQ    FI  S+ G Y  S+   + E D+                 ++    L T     
Sbjct: 100 EQKPKVFISASAVGYYGPSEDREYTEEDSPAGDDFLAELCRDWEEAAQAAEDLGTRVVLL 159

Query: 138 ----VLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193
               VL  KG     +   +  G                 G P+   GSG Q     H++
Sbjct: 160 RTGIVLGPKGGALAKMLLPFRLG----------------LGGPL---GSGRQWFSWIHIE 200

Query: 194 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG----FPEPELV 242
           DL +  +  L N   S    N +  + V     A+A A+A      FP P  V
Sbjct: 201 DLVQLILFALENASVS-GPVNATAPEPVRNKEFAKALARALHRPAFFPVPAFV 252

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 13/143 (9%)

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIYGPL 158
            ++ S+  V+      P+ ETDT +P +   + KL  E  + + G     LR  ++YG  
Sbjct: 95  LVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEY 154

Query: 159 NYNPVEEWFFHRLKAGRPIPIP----GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN 214
             N V+       K G+ + +     GS        + +DLA A +++L  EK    V++
Sbjct: 155 GNNFVK-TMLRLAKEGKELKVVDDQYGSPT------YTEDLADAILELLEKEKEGG-VYH 206

Query: 215 ISGEKYVTFDGLARACAKAAGFP 237
           +      ++   A+A  + AG  
Sbjct: 207 LVNSGECSWYEFAKAIFEEAGVD 229

Length = 281

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 2  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE 39
          GGT FIG  L+R L   GH+V + +R +   A+ L   
Sbjct: 6  GGTGFIGRALTRRLTAAGHEVVVLSR-RPGKAEGLAEV 42

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 53/242 (21%), Positives = 93/242 (38%), Gaps = 34/242 (14%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T  +G  +   L+   G  VT+ TR  +         S  EF     K+  +  D   
Sbjct: 6   GATGTLGGPIVSALLASPGFTVTVLTRPSST--------SSNEFQPSGVKV--VPVDYAS 55

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEP-ILDALPNLEQFIYCSSAGV--YLKSDL-LP 116
           ++ + ++L  KG D V    G  A   +  ++DA           +AGV  ++ S+  + 
Sbjct: 56  HESLVAAL--KGVDAVISALGGAAIGDQLKLIDA---------AIAAGVKRFIPSEFGVD 104

Query: 117 HCETDTVDPKSRHKGKLNTESVLESK--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
           +     +        K +    L +K  G+ WT    V     L+Y  +E  F     A 
Sbjct: 105 YDRIGALPLLDLFDEKRDVRRYLRAKNAGLPWTY---VSTGMFLDY-LLEPLFGVVDLAN 160

Query: 175 RPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKA 233
           R   I G G        ++D+ RA  + L + ++   +V  ++G+  VT + L     + 
Sbjct: 161 RTATIYGDGETKFAFTTLEDIGRAVARALTHPDRTLNRVVFVAGD-VVTQNELIALVERV 219

Query: 234 AG 235
            G
Sbjct: 220 TG 221

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 8/84 (9%)

Query: 143 GVNWTSLRPVYIYGPLNYNPVEEW---FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199
           G+     R    YGP  Y   E+          AG+P+P+ G G QV    +V+D  RA 
Sbjct: 169 GLPALITRCSNNYGP--YQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAI 226

Query: 200 VQVLGNEKA-SRQVFNISGEKYVT 222
             VL  EK    + +NI G    T
Sbjct: 227 YLVL--EKGRVGETYNIGGGNERT 248

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 54/270 (20%), Positives = 103/270 (38%), Gaps = 42/270 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L   L++EG++V +     +   + +  E + +   F      +K D  D 
Sbjct: 6   GGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENKAFRF------VKRDLLDT 59

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEPILD---------------ALPNLEQF 100
                 ++ K  D V+      D+     D   P +D                   +++ 
Sbjct: 60  ---ADKVAKKDGDTVFHLAANPDVRLGATD---PDIDLEENVLATYNVLEAMRANGVKRI 113

Query: 101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK----GVNWTSLRPVYIY 155
           ++ SS+ VY ++ ++P  E     P S +   KL  E+++ +     G      R   I 
Sbjct: 114 VFASSSTVYGEAKVIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQAWIFRFANIV 173

Query: 156 GPLNYNPVEEWFFHRLKAGRP--IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
           GP + + V   F ++LK   P  + + G G Q     +V D   A +           +F
Sbjct: 174 GPRSTHGVIYDFINKLKR-NPNELEVLGDGRQRKSYLYVSDCVDAMLLAWEKSTEGVNIF 232

Query: 214 NISGEKYVTFDGLARACAKAAGFPEPELVH 243
           N+  +  ++ + +A    +  G  +P   +
Sbjct: 233 NLGNDDTISVNEIAEIVIEELGL-KPRFKY 261

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 54/255 (21%), Positives = 94/255 (36%), Gaps = 55/255 (21%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
            G T  IG  ++  L++ G  V    R     A           A   ++++   GD  D
Sbjct: 4   TGATGRIGSKVATTLLEAGRPVRALVRSDERAA---------ALAARGAEVV--VGDLDD 52

Query: 61  YDFVKSSLSAKGFDVVY---------DINGREADEVEPILDALPN--LEQFIYCSSAGVY 109
              + ++L   G D V+         D         E    AL    +++ +  SS G  
Sbjct: 53  PAVLAAAL--AGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGVKRVVNLSSVGAD 110

Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFH 169
            +S       +  +      +G    E VL   G+    LRP +         +E     
Sbjct: 111 PES------PSGLI------RGHWLMEQVLNWAGLPVVHLRPAWF--------MENLLSQ 150

Query: 170 R---LKAGR-PIPIPGSGIQVTQLGHV--KDLARAFVQVLGN-EKASRQVFNISGEKYVT 222
                KAG   +P PG G    +L  +   D+AR   ++L + E    +V+ ++G + +T
Sbjct: 151 APSIRKAGVLALPFPGDG----RLPPIATDDIARVAAKLLLDPEWHGHRVYELTGPEDLT 206

Query: 223 FDGLARACAKAAGFP 237
            + +A A ++  G P
Sbjct: 207 MNEIAAALSRVLGRP 221

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 166 WFFHRLKAGRPIPIPGSG-IQVTQLGHVKDLARAFVQVLGNEKASR-QVFNISG 217
           +F      G+P+ I G G  QV  + H  DL   +++   N    + +VFNI G
Sbjct: 216 YFLKCAVTGKPLTIFGYGGKQVRDVLHSADLVNLYLRQFQNPDRRKGEVFNIGG 269

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 12/82 (14%)

Query: 2  GGT-RFIGVFLSRLLVKEGHQVTLF----TRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
          GGT R +   L+  LV  GH+VTLF    ++  AP+   +P     +             
Sbjct: 19 GGTERVVA-ALTEGLVARGHEVTLFASGDSKTAAPLVPVVPEPLRLDAPGRDRAEAEA-- 75

Query: 57 DRKDYDFVKSSLSAKGFDVVYD 78
                  + +L+A  FD+V++
Sbjct: 76 ----LALAERALAAGDFDIVHN 93

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	287
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PLN02686	367	cinnamoyl-CoA reductase	99.98
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.98
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.97
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.97
PRK05865	854	hypothetical protein; Provisional	99.97
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.97
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.96
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.96
PLN02996	491	fatty acyl-CoA reductase	99.96
PLN02583	297	cinnamoyl-CoA reductase	99.95
PRK07201	657	short chain dehydrogenase; Provisional	99.95
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.94
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.94
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.94
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.93
PLN02778	298	3,5-epimerase/4-reductase	99.93
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.93
PRK12320	699	hypothetical protein; Provisional	99.93
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.92
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.91
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.91
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.9
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.9
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.9
PLN02503	605	fatty acyl-CoA reductase 2	99.89
PLN02260	668	probable rhamnose biosynthetic enzyme	99.88
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.85
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.85
PLN03209	576	translocon at the inner envelope of chloroplast su	99.83
PRK06482	276	short chain dehydrogenase; Provisional	99.78
KOG2774	366	consensus NAD dependent epimerase [General functio	99.78
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.78
PRK09135	249	pteridine reductase; Provisional	99.78
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.76
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.75
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.75
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.74
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.74
COG2910	211	Putative NADH-flavin reductase [General function p	99.73
PRK07806	248	short chain dehydrogenase; Provisional	99.73
PRK07774	250	short chain dehydrogenase; Provisional	99.72
PRK05875	276	short chain dehydrogenase; Provisional	99.71
PRK08263	275	short chain dehydrogenase; Provisional	99.71
PRK07074	257	short chain dehydrogenase; Provisional	99.7
PRK12828	239	short chain dehydrogenase; Provisional	99.69
PRK07775	274	short chain dehydrogenase; Provisional	99.68
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.68
PRK07067	257	sorbitol dehydrogenase; Provisional	99.67
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.66
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.66
PRK06138	252	short chain dehydrogenase; Provisional	99.66
PRK12746	254	short chain dehydrogenase; Provisional	99.66
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.65
PRK09186	256	flagellin modification protein A; Provisional	99.65
PRK06180	277	short chain dehydrogenase; Provisional	99.65
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.64
PRK06914	280	short chain dehydrogenase; Provisional	99.64
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.64
PRK06128	300	oxidoreductase; Provisional	99.64
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.64
PRK06182	273	short chain dehydrogenase; Validated	99.64
PRK12827	249	short chain dehydrogenase; Provisional	99.64
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.63
PRK06701	290	short chain dehydrogenase; Provisional	99.63
PRK06123	248	short chain dehydrogenase; Provisional	99.63
PRK12829	264	short chain dehydrogenase; Provisional	99.63
PRK08219	227	short chain dehydrogenase; Provisional	99.61
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.61
PRK07890	258	short chain dehydrogenase; Provisional	99.61
PRK07577	234	short chain dehydrogenase; Provisional	99.61
PRK06194	287	hypothetical protein; Provisional	99.61
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.61
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.61
PRK07060	245	short chain dehydrogenase; Provisional	99.61
PRK05876	275	short chain dehydrogenase; Provisional	99.61
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.6
PRK06181	263	short chain dehydrogenase; Provisional	99.59
PRK12937	245	short chain dehydrogenase; Provisional	99.59
PRK07041	230	short chain dehydrogenase; Provisional	99.59
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.59
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.59
PRK12939	250	short chain dehydrogenase; Provisional	99.59
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.58
PRK05993	277	short chain dehydrogenase; Provisional	99.58
PRK08324	681	short chain dehydrogenase; Validated	99.57
PRK06196	315	oxidoreductase; Provisional	99.57
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.57
PRK06500	249	short chain dehydrogenase; Provisional	99.56
PRK09134	258	short chain dehydrogenase; Provisional	99.56
PRK08628	258	short chain dehydrogenase; Provisional	99.56
PRK06114	254	short chain dehydrogenase; Provisional	99.56
PRK06523	260	short chain dehydrogenase; Provisional	99.55
PRK06841	255	short chain dehydrogenase; Provisional	99.55
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.55
PRK05717	255	oxidoreductase; Validated	99.54
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.54
PRK10538	248	malonic semialdehyde reductase; Provisional	99.54
PRK09291	257	short chain dehydrogenase; Provisional	99.54
PRK08017	256	oxidoreductase; Provisional	99.53
PRK07985	294	oxidoreductase; Provisional	99.53
PRK07825	273	short chain dehydrogenase; Provisional	99.53
PRK06398	258	aldose dehydrogenase; Validated	99.53
PRK07069	251	short chain dehydrogenase; Validated	99.53
PLN02253	280	xanthoxin dehydrogenase	99.53
PRK12743	256	oxidoreductase; Provisional	99.53
PRK06949	258	short chain dehydrogenase; Provisional	99.52
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.52
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.52
PRK06179	270	short chain dehydrogenase; Provisional	99.51
PRK07326	237	short chain dehydrogenase; Provisional	99.51
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.51
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.51
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.51
PRK08264	238	short chain dehydrogenase; Validated	99.51
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.5
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.5
PRK07454	241	short chain dehydrogenase; Provisional	99.5
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.5
PRK07478	254	short chain dehydrogenase; Provisional	99.5
PRK07856	252	short chain dehydrogenase; Provisional	99.5
PRK12744	257	short chain dehydrogenase; Provisional	99.49
PRK08643	256	acetoin reductase; Validated	99.49
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.49
PRK05650	270	short chain dehydrogenase; Provisional	99.49
PRK07814	263	short chain dehydrogenase; Provisional	99.49
PRK07063	260	short chain dehydrogenase; Provisional	99.49
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.48
PRK06172	253	short chain dehydrogenase; Provisional	99.48
PRK08339	263	short chain dehydrogenase; Provisional	99.48
PRK07109	334	short chain dehydrogenase; Provisional	99.48
PRK12742	237	oxidoreductase; Provisional	99.48
PRK09242	257	tropinone reductase; Provisional	99.48
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.47
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.47
PRK06057	255	short chain dehydrogenase; Provisional	99.47
PRK08265	261	short chain dehydrogenase; Provisional	99.47
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.47
PRK06483	236	dihydromonapterin reductase; Provisional	99.47
PRK07035	252	short chain dehydrogenase; Provisional	99.47
PRK12747	252	short chain dehydrogenase; Provisional	99.47
PRK06101	240	short chain dehydrogenase; Provisional	99.46
PRK07024	257	short chain dehydrogenase; Provisional	99.46
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.46
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.45
PRK05867	253	short chain dehydrogenase; Provisional	99.45
PRK06198	260	short chain dehydrogenase; Provisional	99.44
PRK08589	272	short chain dehydrogenase; Validated	99.44
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.43
PRK08226	263	short chain dehydrogenase; Provisional	99.43
PRK07677	252	short chain dehydrogenase; Provisional	99.43
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.43
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.42
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.42
PRK07102	243	short chain dehydrogenase; Provisional	99.42
PRK07576	264	short chain dehydrogenase; Provisional	99.41
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.41
PRK07831	262	short chain dehydrogenase; Provisional	99.41
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.41
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.4
PRK07904	253	short chain dehydrogenase; Provisional	99.4
PRK08267	260	short chain dehydrogenase; Provisional	99.4
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.4
PRK05866	293	short chain dehydrogenase; Provisional	99.4
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.39
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.39
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.39
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.39
PRK05693	274	short chain dehydrogenase; Provisional	99.38
PRK06197	306	short chain dehydrogenase; Provisional	99.38
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.38
PRK08251	248	short chain dehydrogenase; Provisional	99.37
PRK07062	265	short chain dehydrogenase; Provisional	99.37
PRK06139	330	short chain dehydrogenase; Provisional	99.37
PRK06924	251	short chain dehydrogenase; Provisional	99.36
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.36
PRK06484	520	short chain dehydrogenase; Validated	99.36
PRK07023	243	short chain dehydrogenase; Provisional	99.36
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.36
PRK05872	296	short chain dehydrogenase; Provisional	99.35
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.34
PRK08278	273	short chain dehydrogenase; Provisional	99.33
PRK09072	263	short chain dehydrogenase; Provisional	99.32
PRK08177	225	short chain dehydrogenase; Provisional	99.3
PRK07201	657	short chain dehydrogenase; Provisional	99.3
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.29
PRK06940	275	short chain dehydrogenase; Provisional	99.29
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.29
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.28
PRK06125	259	short chain dehydrogenase; Provisional	99.28
PRK07832	272	short chain dehydrogenase; Provisional	99.28
PRK05855	582	short chain dehydrogenase; Validated	99.28
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.27
PRK05884	223	short chain dehydrogenase; Provisional	99.27
PRK07578	199	short chain dehydrogenase; Provisional	99.26
PRK05854	313	short chain dehydrogenase; Provisional	99.25
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.25
PRK08703	239	short chain dehydrogenase; Provisional	99.25
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.23
PRK06953	222	short chain dehydrogenase; Provisional	99.22
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.21
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.2
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.19
PRK07791	286	short chain dehydrogenase; Provisional	99.17
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.16
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.16
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.15
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.15
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.14
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.13
PRK12367	245	short chain dehydrogenase; Provisional	99.13
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.12
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.12
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.11
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.1
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.1
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.1
PRK06484	520	short chain dehydrogenase; Validated	99.09
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.08
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.08
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.07
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.06
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.06
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.03
PRK05599	246	hypothetical protein; Provisional	99.03
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.01
PLN02780	320	ketoreductase/ oxidoreductase	99.01
PLN00015	308	protochlorophyllide reductase	99.0
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	98.99
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	98.94
PRK08862	227	short chain dehydrogenase; Provisional	98.93
PRK08303	305	short chain dehydrogenase; Provisional	98.83
KOG1208	314	consensus Dehydrogenases with different specificit	98.77
KOG0725	270	consensus Reductases with broad range of substrate	98.77
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	98.76
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	98.73
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.72
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.71
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.69
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.64
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	98.6
PRK08309	177	short chain dehydrogenase; Provisional	98.57
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.51
PRK09620	229	hypothetical protein; Provisional	98.42
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.42
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	98.36
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.31
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.29
COG1028	251	FabG Dehydrogenases with different specificities (	98.28
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.26
PRK06720	169	hypothetical protein; Provisional	98.25
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.23
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.22
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.13
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.09
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.01
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.01
PTZ00325	321	malate dehydrogenase; Provisional	98.0
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.74
PLN00106	323	malate dehydrogenase	97.62
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.62
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.52
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	97.49
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	97.48
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.46
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.44
COG3268	382	Uncharacterized conserved protein [Function unknow	97.44
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.4
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.17
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.0
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	96.86
PRK05086	312	malate dehydrogenase; Provisional	96.85
PRK14982	340	acyl-ACP reductase; Provisional	96.79
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.63
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	96.63
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.57
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	96.54
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.54
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.53
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.48
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	96.45
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	96.43
PRK09496	453	trkA potassium transporter peripheral membrane com	96.39
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	96.22
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	96.22
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.13
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.12
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	96.11
PRK04148	134	hypothetical protein; Provisional	95.98
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.96
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	95.94
PRK09496	453	trkA potassium transporter peripheral membrane com	95.9
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	95.66
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	95.65
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.6
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	95.54
PRK00048	257	dihydrodipicolinate reductase; Provisional	95.47
PLN02383	344	aspartate semialdehyde dehydrogenase	95.42
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	95.42
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.37
PRK10669	558	putative cation:proton antiport protein; Provision	95.35
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.34
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	95.33
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.26
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	95.19
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	95.12
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.08
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.08
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.03
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.03
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	94.95
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	94.88
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	94.87
PRK08306	296	dipicolinate synthase subunit A; Reviewed	94.87
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.85
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	94.84
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	94.8
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	94.8
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	94.77
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	94.72
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	94.67
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	94.61
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	94.51
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	94.45
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	94.41
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	94.41
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	94.4
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	94.35
PLN02494	477	adenosylhomocysteinase	94.33
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.24
PRK03659	601	glutathione-regulated potassium-efflux system prot	94.23
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	94.23
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	94.22
PRK06436	303	glycerate dehydrogenase; Provisional	94.18
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	94.13
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	94.12
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.11
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.07
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	93.97
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	93.95
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	93.88
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	93.86
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	93.79
PRK08655	437	prephenate dehydrogenase; Provisional	93.79
PTZ00075	476	Adenosylhomocysteinase; Provisional	93.79
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	93.76
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	93.72
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	93.7
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	93.69
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	93.66
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	93.66
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	93.64
PRK13243	333	glyoxylate reductase; Reviewed	93.63
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	93.58
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	93.56
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	93.45
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	93.44
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	93.4
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	93.37
PF03447	117	NAD_binding_3: Homoserine dehydrogenase, NAD bindi	93.32
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	93.32
PLN02928	347	oxidoreductase family protein	93.31
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.29
TIGR01161	352	purK phosphoribosylaminoimidazole carboxylase, Pur	93.28
PRK10537	393	voltage-gated potassium channel; Provisional	93.24
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	93.12
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	93.07
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	93.06
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	93.06
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	93.05
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	93.04
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	92.97
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	92.94
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	92.94
PRK12480	330	D-lactate dehydrogenase; Provisional	92.91
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.88
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	92.87
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	92.72
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	92.71
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	92.68
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.67
PLN02586	360	probable cinnamyl alcohol dehydrogenase	92.66
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	92.62
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	92.61
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	92.6
PRK07574	385	formate dehydrogenase; Provisional	92.57
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	92.51
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	92.46
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	92.44
KOG0409	327	consensus Predicted dehydrogenase [General functio	92.4
PRK06487	317	glycerate dehydrogenase; Provisional	92.35
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	92.31
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	92.31
PRK03562	621	glutathione-regulated potassium-efflux system prot	92.28
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	92.27
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	92.25
PRK08328	231	hypothetical protein; Provisional	92.24
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	92.2
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	92.18
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	92.15
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	92.1
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	92.02
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	92.02
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	91.95
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	91.93
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	91.86
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	91.83
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	91.76
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	91.71
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	91.65
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	91.63
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	91.54
PRK06849	389	hypothetical protein; Provisional	91.54
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	91.54
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	91.52
PRK15116	268	sulfur acceptor protein CsdL; Provisional	91.46
PRK05442	326	malate dehydrogenase; Provisional	91.37
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.3
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	91.2
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	91.16
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	91.14
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	91.11
COG1023	300	Gnd Predicted 6-phosphogluconate dehydrogenase [Ca	90.97
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	90.96
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	90.96
PRK13403	335	ketol-acid reductoisomerase; Provisional	90.89
PRK08223	287	hypothetical protein; Validated	90.88
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	90.86
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	90.84
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	90.78
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	90.77
PLN03139	386	formate dehydrogenase; Provisional	90.68
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	90.67
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	90.62
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	90.61
PRK06932	314	glycerate dehydrogenase; Provisional	90.53
PRK07417	279	arogenate dehydrogenase; Reviewed	90.49
COG4091	438	Predicted homoserine dehydrogenase [Amino acid tra	90.44
PLN02178	375	cinnamyl-alcohol dehydrogenase	90.39
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	90.34
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	90.33
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	90.32
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	90.14
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	90.04
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	90.03
PRK15059	292	tartronate semialdehyde reductase; Provisional	90.02
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	89.83
TIGR00514	449	accC acetyl-CoA carboxylase, biotin carboxylase su	89.82
PRK12833	467	acetyl-CoA carboxylase biotin carboxylase subunit;	89.78
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	89.7
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	89.59
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	89.52
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	89.49
PRK06111	450	acetyl-CoA carboxylase biotin carboxylase subunit;	89.32
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	89.32

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.3e-44  Score=284.43  Aligned_cols=264  Identities=21%  Similarity=0.247  Sum_probs=220.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++.+.+|++.|++|+++++-.....+.+.+          ..++++++|+.|.+.+.++|++.++|+|||+|
T Consensus         6 tGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~----------~~~~f~~gDi~D~~~L~~vf~~~~idaViHFA   75 (329)
T COG1087           6 TGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK----------LQFKFYEGDLLDRALLTAVFEENKIDAVVHFA   75 (329)
T ss_pred             ecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh----------ccCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence            79999999999999999999999999877664444431          12689999999999999999999999999999


Q ss_pred             CC----------------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhh-
Q 023110           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (287)
Q Consensus        81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-  140 (287)
                      +.                |+.++.+|+++|+  ++++|||.||+.|||.....|++|+.+..|.++| .+|++.|++++ 
T Consensus        76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d  155 (329)
T COG1087          76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRD  155 (329)
T ss_pred             cccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHH
Confidence            87                4667999999998  9999999999999999999999999999999988 99999999985 


Q ss_pred             ---hCCCcEEEEecCeeecCCC----------CCChhHHHHHHHHcCCC-ccCCC------CCCceeeeeeHHHHHHHHH
Q 023110          141 ---SKGVNWTSLRPVYIYGPLN----------YNPVEEWFFHRLKAGRP-IPIPG------SGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       141 ---~~~~~~~ilR~~~v~g~~~----------~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~i~~~D~a~~~~  200 (287)
                         ..+++++++|..++.|...          ....++..++.++..++ +.++|      ||...||+||+.|+|.+.+
T Consensus       156 ~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~  235 (329)
T COG1087         156 AAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHV  235 (329)
T ss_pred             HHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHH
Confidence               4689999999999998531          13455555666655544 66665      5677999999999999999


Q ss_pred             HHHcCCcc--CCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCC
Q 023110          201 QVLGNEKA--SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTW  278 (287)
Q Consensus       201 ~~~~~~~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  278 (287)
                      .+++.-..  ...+||++++...|..|+++++.+.+|.+. ++...+          .++.++..++.|+ +|++++|||
T Consensus       236 ~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~i-p~~~~~----------RR~GDpa~l~Ad~-~kA~~~Lgw  303 (329)
T COG1087         236 LALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDI-PVEIAP----------RRAGDPAILVADS-SKARQILGW  303 (329)
T ss_pred             HHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcC-ceeeCC----------CCCCCCceeEeCH-HHHHHHhCC
Confidence            99865322  225999999999999999999999999876 333221          2344567888899 999999999


Q ss_pred             cccc-cccc
Q 023110          279 WKVL-QTHT  286 (287)
Q Consensus       279 ~p~~-~~~~  286 (287)
                      +|++ ++++
T Consensus       304 ~p~~~~L~~  312 (329)
T COG1087         304 QPTYDDLED  312 (329)
T ss_pred             CcccCCHHH
Confidence            9999 7765

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.6e-43  Score=274.96  Aligned_cols=268  Identities=22%  Similarity=0.257  Sum_probs=224.6

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCcc-ccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      |||+||||+.+++.++++.  ++|+.++.=.-. ..+.+....      ..++..|+++|+.|.+.+.+++++.++|+|+
T Consensus         6 TGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~------~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vv   79 (340)
T COG1088           6 TGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE------DSPRYRFVQGDICDRELVDRLFKEYQPDAVV   79 (340)
T ss_pred             ecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh------cCCCceEEeccccCHHHHHHHHHhcCCCeEE
Confidence            7999999999999999984  456777652211 111111110      0358999999999999999999988899999


Q ss_pred             ecCCC----------------CcccHHHHHHhCC--C-CccEEEEecceeeccCCC--CCCCCCCCCCCCcch-hhhHHH
Q 023110           78 DINGR----------------EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL--LPHCETDTVDPKSRH-KGKLNT  135 (287)
Q Consensus        78 ~~a~~----------------~~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~--~~~~e~~~~~~~~~~-~~k~~~  135 (287)
                      |+|+-                |+.+|.+||++++  . ..||+++||..|||.-..  ..++|.++.+|.++| .||+.+
T Consensus        80 hfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAas  159 (340)
T COG1088          80 HFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAAS  159 (340)
T ss_pred             EechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhH
Confidence            99876                4678999999988  2 259999999999997543  369999999999998 999988


Q ss_pred             HHHh----hhCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCC
Q 023110          136 ESVL----ESKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (287)
Q Consensus       136 E~~~----~~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (287)
                      ..++    +.+|++++|.|+++.|||.+.. .+++.++..++.|++++++|+|.+.+||+|++|=|+++..++.++. .|
T Consensus       160 D~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~-~G  238 (340)
T COG1088         160 DLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGK-IG  238 (340)
T ss_pred             HHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCc-CC
Confidence            7665    5689999999999999998753 6788889999999999999999999999999999999999999988 49


Q ss_pred             ceEEecCCcccCHHHHHHHHHHHhCCCCCe----EEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          211 QVFNISGEKYVTFDGLARACAKAAGFPEPE----LVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       211 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      ++|||+++...+-.|+++.|++.+|+..+.    +..+.+          ++.-+.++.+|. +|++++|||.|++++|+
T Consensus       239 E~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~D----------RpGHD~RYaid~-~Ki~~eLgW~P~~~fe~  307 (340)
T COG1088         239 ETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVED----------RPGHDRRYAIDA-SKIKRELGWRPQETFET  307 (340)
T ss_pred             ceEEeCCCccchHHHHHHHHHHHhCccccchhhheEeccC----------CCCCccceeech-HHHhhhcCCCcCCCHHH
Confidence            999999999999999999999999987753    444332          344567888999 99999999999999885

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=7.8e-42  Score=290.72  Aligned_cols=278  Identities=17%  Similarity=0.154  Sum_probs=211.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|........+..............+.++.+|+.|.+.+..+++  ++|+|||+|
T Consensus        21 tGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--~~d~ViHlA   98 (348)
T PRK15181         21 TGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--NVDYVLHQA   98 (348)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--CCCEEEECc
Confidence            799999999999999999999999998654311111100000000001468899999999999999998  899999999


Q ss_pred             CC----------------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhh-
Q 023110           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (287)
Q Consensus        81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-  140 (287)
                      +.                |+.++.+++++|+  ++++|||+||..+||.....+..|+++..|.+.| .+|..+|.+++ 
T Consensus        99 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~  178 (348)
T PRK15181         99 ALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADV  178 (348)
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHH
Confidence            85                2346889999988  7899999999999997666677787777787776 99999998764 


Q ss_pred             ---hCCCcEEEEecCeeecCCCCC-----ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCc--cCC
Q 023110          141 ---SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASR  210 (287)
Q Consensus       141 ---~~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~  210 (287)
                         +.+++++++||+++|||++..     .+++.++..+..++++.+++++.+.++++|++|+|++++.++....  ..+
T Consensus       179 ~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~  258 (348)
T PRK15181        179 FARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258 (348)
T ss_pred             HHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCC
Confidence               458999999999999997432     3567788888888888888999999999999999999988775432  256


Q ss_pred             ceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       211 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      ++||+++++.+|+.|+++.+.+.++.......   .....+..  ..+.......+|+ +|++++|||+|+++++|
T Consensus       259 ~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~d~-~k~~~~lGw~P~~sl~e  328 (348)
T PRK15181        259 KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQS---RAEPIYKD--FRDGDVKHSQADI-TKIKTFLSYEPEFDIKE  328 (348)
T ss_pred             CEEEecCCCcEeHHHHHHHHHHHhCccccccc---CCCcccCC--CCCCcccccccCH-HHHHHHhCCCCCCCHHH
Confidence            89999999999999999999999874321000   00000000  0111233556888 99999999999999886

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=4.2e-40  Score=282.98  Aligned_cols=276  Identities=57%  Similarity=0.955  Sum_probs=218.0

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh-cCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||||++|+++|+++||+|++++|+.... ..+.........++ ..+++++.+|+.|   +..++...++|+|||++
T Consensus        63 GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~~~~~d~Vi~~~  138 (378)
T PLN00016         63 GGHAFIGFYLAKELVKAGHEVTLFTRGKEPS-QKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVAGAGFDVVYDNN  138 (378)
T ss_pred             CCceeEhHHHHHHHHHCCCEEEEEecCCcch-hhhccCchhhhhHhhhcCceEEEecHHH---HHhhhccCCccEEEeCC
Confidence            9999999999999999999999999987542 11111000111111 2368999999876   44555444899999999


Q ss_pred             CCCcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCCCcEEEEecCeeecCC
Q 023110           81 GREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPL  158 (287)
Q Consensus        81 ~~~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~ilR~~~v~g~~  158 (287)
                      +.....+.+++++++  ++++|||+||.++|+.....+..|.++..|..   +|..+|.++++.+++++++||+++|||+
T Consensus       139 ~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~---sK~~~E~~l~~~~l~~~ilRp~~vyG~~  215 (378)
T PLN00016        139 GKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA---GHLEVEAYLQKLGVNWTSFRPQYIYGPG  215 (378)
T ss_pred             CCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc---hHHHHHHHHHHcCCCeEEEeceeEECCC
Confidence            888888999999987  88999999999999976666777777665544   7999999999999999999999999997


Q ss_pred             CCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHHHHhCCCC
Q 023110          159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  238 (287)
                      ....+..+++..+..++++.+++++.+.++++|++|+|++++.+++++...+++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       216 ~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~  295 (378)
T PLN00016        216 NNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPE  295 (378)
T ss_pred             CCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCC
Confidence            65556667777888888888888888999999999999999999988765678999999999999999999999999876


Q ss_pred             CeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          239 PELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                       .+...+...+.++.....+.+......|+ +|++++|||+|++++++
T Consensus       296 -~i~~~~~~~~~~~~~~~~p~~~~~~~~d~-~ka~~~LGw~p~~~l~e  341 (378)
T PLN00016        296 -EIVHYDPKAVGFGAKKAFPFRDQHFFASP-RKAKEELGWTPKFDLVE  341 (378)
T ss_pred             -ceeecCccccCccccccccccccccccCH-HHHHHhcCCCCCCCHHH
Confidence             55444443333333222333445556788 99999999999998876

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.4e-38  Score=247.17  Aligned_cols=273  Identities=21%  Similarity=0.268  Sum_probs=219.9

Q ss_pred             CCcccchHHHHHHHHHHc--CCeEEEEEcC-CccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~--g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      |||.||||+..++.+...  .++.+.++.= --.....++....      ..+..++.+|+.+...+..++.....|.|+
T Consensus        12 tgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n------~p~ykfv~~di~~~~~~~~~~~~~~id~vi   85 (331)
T KOG0747|consen   12 TGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRN------SPNYKFVEGDIADADLVLYLFETEEIDTVI   85 (331)
T ss_pred             ecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhcc------CCCceEeeccccchHHHHhhhccCchhhhh
Confidence            799999999999999986  4555555431 1110122211110      468999999999999999999988999999


Q ss_pred             ecCCC----------------CcccHHHHHHhCC---CCccEEEEecceeeccCCCCCCC-CCCCCCCCcch-hhhHHHH
Q 023110           78 DINGR----------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC-ETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        78 ~~a~~----------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~-e~~~~~~~~~~-~~k~~~E  136 (287)
                      |+|+.                |+..+..|++++.   ++++|||+||..|||+....... |.+.+.|.++| .+|+++|
T Consensus        86 hfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE  165 (331)
T KOG0747|consen   86 HFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAE  165 (331)
T ss_pred             hhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHH
Confidence            99876                3556888999977   78999999999999987766555 88999999998 9999999


Q ss_pred             HHhh----hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCc
Q 023110          137 SVLE----SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (287)
Q Consensus       137 ~~~~----~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (287)
                      ..++    +++++++++|.++||||++.. ..++.|+.....+++.++.|++.+.++++|++|+++++..+++++. .|+
T Consensus       166 ~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~-~ge  244 (331)
T KOG0747|consen  166 MLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGE-LGE  244 (331)
T ss_pred             HHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCC-ccc
Confidence            9874    578999999999999998754 5678888888889999999999999999999999999999999855 799


Q ss_pred             eEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          212 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       212 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +|||++.+.++..|+++.+.+.+.+..+++..-|...    .-..++..+.++.++. +|++ .|||+|.+|+++
T Consensus       245 IYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~----~v~dRp~nd~Ry~~~~-eKik-~LGw~~~~p~~e  313 (331)
T KOG0747|consen  245 IYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIF----FVEDRPYNDLRYFLDD-EKIK-KLGWRPTTPWEE  313 (331)
T ss_pred             eeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcce----ecCCCCcccccccccH-HHHH-hcCCcccCcHHH
Confidence            9999999999999999999999887554332221111    1223344566788999 9999 699999999875

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=6.7e-38  Score=270.46  Aligned_cols=275  Identities=20%  Similarity=0.195  Sum_probs=199.2

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|+++|+++ |++|++++|+......... ...   .....+++++.+|+.|.+.+.++++  ++|+|||+
T Consensus        20 TGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~-~~~---~~~~~~~~~~~~Dl~d~~~l~~~~~--~~d~ViHl   93 (386)
T PLN02427         20 IGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE-PDT---VPWSGRIQFHRINIKHDSRLEGLIK--MADLTINL   93 (386)
T ss_pred             ECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhc-ccc---ccCCCCeEEEEcCCCChHHHHHHhh--cCCEEEEc
Confidence            799999999999999998 5999999987544221111 000   0002468999999999999999998  89999999


Q ss_pred             CCCC----------------cccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCC-------------------
Q 023110           80 NGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------------------  123 (287)
Q Consensus        80 a~~~----------------~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------------------  123 (287)
                      |+..                +.++.+++++|+ ..++|||+||..+||.....+..|+.+.                   
T Consensus        94 Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~  173 (386)
T PLN02427         94 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFG  173 (386)
T ss_pred             ccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccC
Confidence            9742                224667888876 4489999999999986433223332221                   


Q ss_pred             ---CCCcch-hhhHHHHHHhh----hCCCcEEEEecCeeecCCCC------------CChhHHHHHHHHcCCCccCCCCC
Q 023110          124 ---DPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY------------NPVEEWFFHRLKAGRPIPIPGSG  183 (287)
Q Consensus       124 ---~~~~~~-~~k~~~E~~~~----~~~~~~~ilR~~~v~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~  183 (287)
                         .|.+.| .+|..+|.++.    ..+++++++||++||||+..            ..++..++..+..++++.+++++
T Consensus       174 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g  253 (386)
T PLN02427        174 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGG  253 (386)
T ss_pred             CCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCC
Confidence               122334 99999999875    35899999999999999742            12344456677788888788888


Q ss_pred             CceeeeeeHHHHHHHHHHHHcCCc-cCCceEEecCC-cccCHHHHHHHHHHHhCCCCCe----E--EeCCccccccCCCc
Q 023110          184 IQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGE-KYVTFDGLARACAKAAGFPEPE----L--VHYNPKEFDFGKKK  255 (287)
Q Consensus       184 ~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~----~--~~~~~~~~~~~~~~  255 (287)
                      ++.++++|++|+|++++.+++++. ..+++||++++ +.+|+.|+++.+.+.+|.....    .  ...+...+  ..  
T Consensus       254 ~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~--~~--  329 (386)
T PLN02427        254 QSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKEF--YG--  329 (386)
T ss_pred             CceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCcccc--cC--
Confidence            899999999999999999998764 35679999997 5899999999999999852100    0  01111000  00  


Q ss_pred             ccccccccccccchhhhhhcCCCcccccccc
Q 023110          256 AFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       256 ~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      ...........|+ +|++++|||+|++++++
T Consensus       330 ~~~~~~~~~~~d~-~k~~~~lGw~p~~~l~~  359 (386)
T PLN02427        330 EGYDDSDKRIPDM-TIINKQLGWNPKTSLWD  359 (386)
T ss_pred             ccccchhhccCCH-HHHHHhcCCCcCccHHH
Confidence            0011234556788 99999999999999886

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=7.4e-38  Score=266.25  Aligned_cols=282  Identities=16%  Similarity=0.148  Sum_probs=207.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||+||||++|+++|+++|++|++++|+.... ...+.............+++++.+|+.|.+.+.++++..++|+|||+
T Consensus         6 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH~   85 (343)
T TIGR01472         6 TGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPTEIYNL   85 (343)
T ss_pred             EcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCCEEEEC
Confidence            79999999999999999999999999986421 11111000000000023688999999999999999996678999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CC---ccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHH
Q 023110           80 NGRE----------------ADEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        80 a~~~----------------~~~~~~ll~~~~--~~---~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (287)
                      |+..                +.++.+++++|.  ++   ++|||+||..+||.....+.+|+.+..|.+.| .+|..+|.
T Consensus        86 Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  165 (343)
T TIGR01472        86 AAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHW  165 (343)
T ss_pred             CcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence            9862                235778899876  44   38999999999997666678898888888887 99999998


Q ss_pred             Hhh----hCCCcEEEEecCeeecCCCCCC----hhHHHHHHHHcCCC-ccCCCCCCceeeeeeHHHHHHHHHHHHcCCcc
Q 023110          138 VLE----SKGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       138 ~~~----~~~~~~~ilR~~~v~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (287)
                      +++    +.++++++.|+.++|||+....    .+..++..+..+++ ..+++++++.++|+|++|+|++++.+++++. 
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~-  244 (343)
T TIGR01472       166 ITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK-  244 (343)
T ss_pred             HHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC-
Confidence            874    3578899999999999964322    23334555556653 3455888999999999999999999998754 


Q ss_pred             CCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEe-------CCc----cccccCCCcccccccccccccchhhhhhcCC
Q 023110          209 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVH-------YNP----KEFDFGKKKAFPFRDQLRRQSMCSDGNLSLT  277 (287)
Q Consensus       209 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~-------~~~----~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg  277 (287)
                       ++.|||++++++|+.|+++.+.+.+|++. .+..       .+.    ....+......+........|+ +|++++||
T Consensus       245 -~~~yni~~g~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~k~~~~lg  321 (343)
T TIGR01472       245 -PDDYVIATGETHSVREFVEVSFEYIGKTL-NWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDA-TKAKEKLG  321 (343)
T ss_pred             -CccEEecCCCceeHHHHHHHHHHHcCCCc-ccccccccccccccccCceeEEeCccccCCCccchhcCCH-HHHHHhhC
Confidence             35899999999999999999999999653 1110       000    0011111112233344556788 99999999


Q ss_pred             Ccccccccc
Q 023110          278 WWKVLQTHT  286 (287)
Q Consensus       278 ~~p~~~~~~  286 (287)
                      |+|+++++|
T Consensus       322 w~p~~~l~e  330 (343)
T TIGR01472       322 WKPEVSFEK  330 (343)
T ss_pred             CCCCCCHHH
Confidence            999999876

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=7.9e-38  Score=266.48  Aligned_cols=272  Identities=18%  Similarity=0.213  Sum_probs=202.9

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCC-ChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~-d~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||+|++|+++|+++ |++|++++|+.........          ..+++++.+|+. +.+.+.++++  ++|+|||
T Consensus         7 tGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~--~~d~ViH   74 (347)
T PRK11908          7 LGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN----------HPRMHFFEGDITINKEWIEYHVK--KCDVILP   74 (347)
T ss_pred             ECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc----------CCCeEEEeCCCCCCHHHHHHHHc--CCCEEEE
Confidence            799999999999999987 7999999987543221111          246899999997 6778888888  8999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCC-------CCCcch-hhhH
Q 023110           79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGKL  133 (287)
Q Consensus        79 ~a~~~----------------~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~~~~~~-~~k~  133 (287)
                      +|+..                +.++.+++++|+ ..++|||+||..+||.....+++|+..+       .|.+.| .+|.
T Consensus        75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~  154 (347)
T PRK11908         75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQ  154 (347)
T ss_pred             CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHH
Confidence            98752                234678899887 3489999999999997555566666432       344456 9999


Q ss_pred             HHHHHhh----hCCCcEEEEecCeeecCCCC---------CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       134 ~~E~~~~----~~~~~~~ilR~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      .+|.+++    ..+++++++||+++|||+..         ..++..++..+..++++.+.+++++.++++|++|+|++++
T Consensus       155 ~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~  234 (347)
T PRK11908        155 LMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALM  234 (347)
T ss_pred             HHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHH
Confidence            9998874    46899999999999999742         2356677888888888877788889999999999999999


Q ss_pred             HHHcCCc--cCCceEEecCC-cccCHHHHHHHHHHHhCCCCCeEEe----CCccccc-cCCCcccccccccccccchhhh
Q 023110          201 QVLGNEK--ASRQVFNISGE-KYVTFDGLARACAKAAGFPEPELVH----YNPKEFD-FGKKKAFPFRDQLRRQSMCSDG  272 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~k~  272 (287)
                      .+++++.  ..+++||++++ ..+|+.|+++.+.+.+|... .+..    ....... ................++ +|+
T Consensus       235 ~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~k~  312 (347)
T PRK11908        235 KIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYP-EYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKI-DNT  312 (347)
T ss_pred             HHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcc-cccccccccccccCCchhccCcCcchhccccCCh-HHH
Confidence            9998753  35789999997 47999999999999998532 2210    0000000 000000011123444677 899


Q ss_pred             hhcCCCcccccccc
Q 023110          273 NLSLTWWKVLQTHT  286 (287)
Q Consensus       273 ~~~lg~~p~~~~~~  286 (287)
                      +++|||+|++++++
T Consensus       313 ~~~lGw~p~~~l~~  326 (347)
T PRK11908        313 MQELGWAPKTTMDD  326 (347)
T ss_pred             HHHcCCCCCCcHHH
Confidence            99999999999886

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=4.1e-37  Score=263.05  Aligned_cols=277  Identities=19%  Similarity=0.189  Sum_probs=206.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|+++.++...... .....  .. ....+++++.+|+.|.+.+.++++..++|+|||+|
T Consensus         7 tGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~--~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A   82 (355)
T PRK10217          7 TGGAGFIGSALVRYIINETSDAVVVVDKLTYAGN-LMSLA--PV-AQSERFAFEKVDICDRAELARVFTEHQPDCVMHLA   82 (355)
T ss_pred             EcCCcHHHHHHHHHHHHcCCCEEEEEecCccccc-hhhhh--hc-ccCCceEEEECCCcChHHHHHHHhhcCCCEEEECC
Confidence            7999999999999999999886654443222110 10000  00 00236788999999999999999865699999999


Q ss_pred             CCC----------------cccHHHHHHhCC-----------CCccEEEEecceeeccCC--CCCCCCCCCCCCCcch-h
Q 023110           81 GRE----------------ADEVEPILDALP-----------NLEQFIYCSSAGVYLKSD--LLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~-----------~~~~~i~~Ss~~v~~~~~--~~~~~e~~~~~~~~~~-~  130 (287)
                      +..                +.++.++++++.           ++++||++||.++|+...  ..+++|+.+..|.+.| .
T Consensus        83 ~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~  162 (355)
T PRK10217         83 AESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSA  162 (355)
T ss_pred             cccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHH
Confidence            762                345677888763           357999999999998532  3468888887787777 9


Q ss_pred             hhHHHHHHhh----hCCCcEEEEecCeeecCCCC-CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcC
Q 023110          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       131 ~k~~~E~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (287)
                      +|..+|.+++    +.+++++++||+++|||+.. ..+++.++.....++++++++++++.++++|++|+|++++.++++
T Consensus       163 sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~  242 (355)
T PRK10217        163 SKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT  242 (355)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhc
Confidence            9999998774    46899999999999999864 346667777777888788888999999999999999999999987


Q ss_pred             CccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCc----cccccCCCcccccccccccccchhhhhhcCCCccc
Q 023110          206 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNP----KEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKV  281 (287)
Q Consensus       206 ~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~  281 (287)
                      .. .+++||+++++.+|+.|+++.+++.+|...+.. +.+.    ..+.+.  ...+.......+|+ +|++++|||+|+
T Consensus       243 ~~-~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~d~-~k~~~~lg~~p~  317 (355)
T PRK10217        243 GK-VGETYNIGGHNERKNLDVVETICELLEELAPNK-PQGVAHYRDLITFV--ADRPGHDLRYAIDA-SKIARELGWLPQ  317 (355)
T ss_pred             CC-CCCeEEeCCCCcccHHHHHHHHHHHhccccccc-ccccccccccceec--CCCCCCCcccccCH-HHHHHhcCCCCc
Confidence            54 568999999999999999999999998633211 1100    001110  11122234556788 999999999999


Q ss_pred             ccccc
Q 023110          282 LQTHT  286 (287)
Q Consensus       282 ~~~~~  286 (287)
                      ++++|
T Consensus       318 ~~l~e  322 (355)
T PRK10217        318 ETFES  322 (355)
T ss_pred             CcHHH
Confidence            99876

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=2e-37  Score=268.72  Aligned_cols=259  Identities=20%  Similarity=0.233  Sum_probs=200.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|...........     .. ....++++.+|+.+..     +.  ++|+|||+|
T Consensus       126 TGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~-----~~-~~~~~~~~~~Di~~~~-----~~--~~D~ViHlA  192 (436)
T PLN02166        126 TGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVH-----LF-GNPRFELIRHDVVEPI-----LL--EVDQIYHLA  192 (436)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhh-----hc-cCCceEEEECcccccc-----cc--CCCEEEECc
Confidence            79999999999999999999999999864321111100     00 0136788888986652     34  799999999


Q ss_pred             CC----------------CcccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCC-----CCCCCcch-hhhHHHHH
Q 023110           81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES  137 (287)
Q Consensus        81 ~~----------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~-----~~~~~~~~-~~k~~~E~  137 (287)
                      +.                |+.++.+++++|+ ...+|||+||..|||.....+.+|+.     +..|.+.| .+|..+|+
T Consensus       193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~  272 (436)
T PLN02166        193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  272 (436)
T ss_pred             eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHH
Confidence            74                2345788999987 33589999999999976655677763     44555556 99999999


Q ss_pred             Hhh----hCCCcEEEEecCeeecCCCC---CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCC
Q 023110          138 VLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (287)
Q Consensus       138 ~~~----~~~~~~~ilR~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (287)
                      +++    +.+++++++|++++|||+..   ..++..++..+..++++.+++++++.++++|++|+|++++.+++...  +
T Consensus       273 ~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~--~  350 (436)
T PLN02166        273 LAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH--V  350 (436)
T ss_pred             HHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC--C
Confidence            874    45899999999999999742   34667788888888888888999999999999999999999987543  4


Q ss_pred             ceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       211 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      ++||+++++.+|+.|+++.+.+.+|.+. .+...+...          .......+|+ +|++++|||+|++++++
T Consensus       351 giyNIgs~~~~Si~ela~~I~~~~g~~~-~i~~~p~~~----------~~~~~~~~d~-~Ka~~~LGw~P~~sl~e  414 (436)
T PLN02166        351 GPFNLGNPGEFTMLELAEVVKETIDSSA-TIEFKPNTA----------DDPHKRKPDI-SKAKELLNWEPKISLRE  414 (436)
T ss_pred             ceEEeCCCCcEeHHHHHHHHHHHhCCCC-CeeeCCCCC----------CCccccccCH-HHHHHHcCCCCCCCHHH
Confidence            6999999999999999999999999765 343322111          1123445788 99999999999998876

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=6.7e-37  Score=261.87  Aligned_cols=258  Identities=19%  Similarity=0.214  Sum_probs=200.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|.++||+|++++|.........           ....+++.+|+.|.+.+..+++  ++|+|||+|
T Consensus        27 tGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~A   93 (370)
T PLN02695         27 TGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSED-----------MFCHEFHLVDLRVMENCLKVTK--GVDHVFNLA   93 (370)
T ss_pred             ECCccHHHHHHHHHHHhCCCEEEEEEeccccccccc-----------cccceEEECCCCCHHHHHHHHh--CCCEEEEcc
Confidence            799999999999999999999999998653211110           1135788999999998888887  899999998


Q ss_pred             CCC-----------------cccHHHHHHhCC--CCccEEEEecceeeccCCC----CCCCCCC--CCCCCcch-hhhHH
Q 023110           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL----LPHCETD--TVDPKSRH-KGKLN  134 (287)
Q Consensus        81 ~~~-----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~----~~~~e~~--~~~~~~~~-~~k~~  134 (287)
                      +..                 +.++.+++++|+  ++++|||+||..+|+....    .++.|++  +..|.+.| .+|..
T Consensus        94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~  173 (370)
T PLN02695         94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA  173 (370)
T ss_pred             cccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHH
Confidence            642                 335678999887  7899999999999986432    2466654  56677666 99999


Q ss_pred             HHHHhh----hCCCcEEEEecCeeecCCCC-----CChhHHHHHHHHc-CCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          135 TESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKA-GRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       135 ~E~~~~----~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      +|.++.    +.+++++++||+++|||+..     ..+...++..+.. +.++.+++++++.++++|++|++++++.+++
T Consensus       174 ~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~  253 (370)
T PLN02695        174 TEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTK  253 (370)
T ss_pred             HHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHh
Confidence            998763    46899999999999999642     1234556666554 4677778899999999999999999999887


Q ss_pred             CCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccc
Q 023110          205 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQT  284 (287)
Q Consensus       205 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~  284 (287)
                      +.  .++.||+++++.+|+.|+++.+.+..|.+. ++...+....           ......|+ +|++++|||+|++++
T Consensus       254 ~~--~~~~~nv~~~~~~s~~el~~~i~~~~g~~~-~i~~~~~~~~-----------~~~~~~d~-sk~~~~lgw~p~~~l  318 (370)
T PLN02695        254 SD--FREPVNIGSDEMVSMNEMAEIALSFENKKL-PIKHIPGPEG-----------VRGRNSDN-TLIKEKLGWAPTMRL  318 (370)
T ss_pred             cc--CCCceEecCCCceeHHHHHHHHHHHhCCCC-CceecCCCCC-----------ccccccCH-HHHHHhcCCCCCCCH
Confidence            64  357899999999999999999999998754 3333222110           11234688 999999999999988


Q ss_pred             cc
Q 023110          285 HT  286 (287)
Q Consensus       285 ~~  286 (287)
                      ++
T Consensus       319 ~e  320 (370)
T PLN02695        319 KD  320 (370)
T ss_pred             HH
Confidence            75

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=3.7e-37  Score=256.59  Aligned_cols=254  Identities=17%  Similarity=0.149  Sum_probs=198.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++|+++|+++| +|++++|...                      .+.+|+.|.+.+.++++..++|+|||+|
T Consensus         6 tG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~A   62 (299)
T PRK09987          6 FGKTGQVGWELQRALAPLG-NLIALDVHST----------------------DYCGDFSNPEGVAETVRKIRPDVIVNAA   62 (299)
T ss_pred             ECCCCHHHHHHHHHhhccC-CEEEeccccc----------------------cccCCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999 7999887632                      1358999999999999866799999999


Q ss_pred             CCC----------------cccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhhC
Q 023110           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~  142 (287)
                      +..                +.++.+++++|+ ...+|||+||..||+.....|++|+++..|.+.| .+|+.+|.+++..
T Consensus        63 a~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~  142 (299)
T PRK09987         63 AHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEH  142 (299)
T ss_pred             ccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            863                234778999987 3358999999999988766789999999998877 9999999999887


Q ss_pred             CCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCC--CCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcc
Q 023110          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGS--GIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (287)
Q Consensus       143 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~  220 (287)
                      ..+++|+|++++|||+. ..+...+++.+.+++++.++++  +.+.+.+.+.+|+++++..++.+.. .+++||+++++.
T Consensus       143 ~~~~~ilR~~~vyGp~~-~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~-~~giyni~~~~~  220 (299)
T PRK09987        143 CAKHLIFRTSWVYAGKG-NNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPE-VAGLYHLVASGT  220 (299)
T ss_pred             CCCEEEEecceecCCCC-CCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCC-CCCeEEeeCCCC
Confidence            78899999999999964 3566778888888888877776  5555555667778888887776543 346999999999


Q ss_pred             cCHHHHHHHHHHHh---CCCCC--eEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          221 VTFDGLARACAKAA---GFPEP--ELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       221 ~s~~e~~~~i~~~~---g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +|+.|+++.+.+.+   |.+.+  .+.+.+...+..     ...++.+..+|+ +|+++.|||+|. ++++
T Consensus       221 ~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~-----~~~rp~~~~ld~-~k~~~~lg~~~~-~~~~  284 (299)
T PRK09987        221 TTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPT-----PARRPHNSRLNT-EKFQQNFALVLP-DWQV  284 (299)
T ss_pred             ccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCC-----CCCCCCcccCCH-HHHHHHhCCCCc-cHHH
Confidence            99999999998864   33321  233433322211     123456667898 999999999985 7765

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=6.2e-37  Score=279.76  Aligned_cols=273  Identities=19%  Similarity=0.214  Sum_probs=205.4

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHH-HHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~-~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|+++|+++ ||+|++++|..........          ..+++++.+|+.|... +.++++  ++|+|||
T Consensus       321 TGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~----------~~~~~~~~gDl~d~~~~l~~~l~--~~D~ViH  388 (660)
T PRK08125        321 LGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG----------HPRFHFVEGDISIHSEWIEYHIK--KCDVVLP  388 (660)
T ss_pred             ECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC----------CCceEEEeccccCcHHHHHHHhc--CCCEEEE
Confidence            799999999999999986 7999999997654211111          2468999999998655 577787  8999999


Q ss_pred             cCCC----------------CcccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCC-------CCCcch-hhhH
Q 023110           79 INGR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGKL  133 (287)
Q Consensus        79 ~a~~----------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~~~~~~-~~k~  133 (287)
                      +|+.                |+.++.+++++|+ ..++|||+||..+||.....+++|+++.       .|.+.| .+|.
T Consensus       389 lAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~  468 (660)
T PRK08125        389 LVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQ  468 (660)
T ss_pred             CccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHH
Confidence            9874                2345778999987 3389999999999997655567787643       233345 9999


Q ss_pred             HHHHHhh----hCCCcEEEEecCeeecCCCC---------CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       134 ~~E~~~~----~~~~~~~ilR~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      .+|.+++    .++++++++||+++|||++.         ..++..++..+..++++.+++++++.++++|++|+|++++
T Consensus       469 ~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~  548 (660)
T PRK08125        469 LLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALF  548 (660)
T ss_pred             HHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHH
Confidence            9999884    45899999999999999742         2356677788888888877888899999999999999999


Q ss_pred             HHHcCCc--cCCceEEecCCc-ccCHHHHHHHHHHHhCCCCCeEEeCCccc-cc----cCCCcccccccccccccchhhh
Q 023110          201 QVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKAAGFPEPELVHYNPKE-FD----FGKKKAFPFRDQLRRQSMCSDG  272 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~k~  272 (287)
                      .++++..  ..+++||+++++ .+|+.|+++.+.+.+|.+... ..++... +.    .+..............|+ +|+
T Consensus       549 ~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~ka  626 (660)
T PRK08125        549 RIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLR-DHFPPFAGFRVVESSSYYGKGYQDVEHRKPSI-RNA  626 (660)
T ss_pred             HHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCccc-ccCCccccccccccccccccccccccccCCCh-HHH
Confidence            9998753  246799999985 799999999999999864312 1222111 00    000000011223445788 999


Q ss_pred             hhcCCCccccccccC
Q 023110          273 NLSLTWWKVLQTHTT  287 (287)
Q Consensus       273 ~~~lg~~p~~~~~~~  287 (287)
                      +++|||+|+++++++
T Consensus       627 ~~~LGw~P~~~lee~  641 (660)
T PRK08125        627 RRLLDWEPKIDMQET  641 (660)
T ss_pred             HHHhCCCCCCcHHHH
Confidence            999999999999873

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=1.1e-36  Score=264.53  Aligned_cols=259  Identities=19%  Similarity=0.233  Sum_probs=198.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|......+....    .+  ...+++++.+|+.++.     +.  ++|+|||+|
T Consensus       125 TGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~----~~--~~~~~~~i~~D~~~~~-----l~--~~D~ViHlA  191 (442)
T PLN02206        125 TGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMH----HF--SNPNFELIRHDVVEPI-----LL--EVDQIYHLA  191 (442)
T ss_pred             ECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhh----hc--cCCceEEEECCccChh-----hc--CCCEEEEee
Confidence            79999999999999999999999998764321111100    00  0246788999987653     34  799999999


Q ss_pred             CC----------------CcccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCC-----CCCCCcch-hhhHHHHH
Q 023110           81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES  137 (287)
Q Consensus        81 ~~----------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~-----~~~~~~~~-~~k~~~E~  137 (287)
                      +.                |+.++.+++++|+ ...+|||+||..+|+.....+.+|+.     +..+.+.| .+|..+|.
T Consensus       192 a~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~  271 (442)
T PLN02206        192 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAET  271 (442)
T ss_pred             eecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHH
Confidence            74                2345788999987 33599999999999876555666663     33344455 99999999


Q ss_pred             Hhh----hCCCcEEEEecCeeecCCC---CCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCC
Q 023110          138 VLE----SKGVNWTSLRPVYIYGPLN---YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (287)
Q Consensus       138 ~~~----~~~~~~~ilR~~~v~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (287)
                      ++.    ..+++++++|++++|||+.   ...++..++.....++++.+++++++.++++|++|+|++++.++++..  +
T Consensus       272 ~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~--~  349 (442)
T PLN02206        272 LTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH--V  349 (442)
T ss_pred             HHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC--C
Confidence            774    4689999999999999973   234566778888888888888999999999999999999999987643  4


Q ss_pred             ceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       211 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +.||+++++.+|+.|+++.+.+.+|.+. .+...+...          .......+|+ +|++++|||+|+++++|
T Consensus       350 g~yNIgs~~~~sl~Elae~i~~~~g~~~-~i~~~p~~~----------~~~~~~~~d~-sKa~~~LGw~P~~~l~e  413 (442)
T PLN02206        350 GPFNLGNPGEFTMLELAKVVQETIDPNA-KIEFRPNTE----------DDPHKRKPDI-TKAKELLGWEPKVSLRQ  413 (442)
T ss_pred             ceEEEcCCCceeHHHHHHHHHHHhCCCC-ceeeCCCCC----------CCccccccCH-HHHHHHcCCCCCCCHHH
Confidence            5999999999999999999999998654 444333211          0123345788 99999999999999886

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=2.4e-36  Score=263.14  Aligned_cols=269  Identities=18%  Similarity=0.212  Sum_probs=195.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccc---cCCCC---C--hhhhh---h-hcCCeEEEEecCCChHHHHhhh
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ---QLPGE---S--DQEFA---E-FSSKILHLKGDRKDYDFVKSSL   68 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~---~~~~~---~--~~~~~---~-~~~~~~~i~~D~~d~~~~~~~~   68 (287)
                      |||+||||++|+++|+++|++|++++|.......   .+...   .  ...+.   . ...+++++.+|+.|.+.+.+++
T Consensus        53 TGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~v~~~l  132 (442)
T PLN02572         53 IGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEFLSEAF  132 (442)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHHHHHHH
Confidence            7999999999999999999999998754221100   00000   0  00000   0 0136899999999999999999


Q ss_pred             hcCCccEEEecCCC-------------------CcccHHHHHHhCC--CCc-cEEEEecceeeccCCCCCCCC-------
Q 023110           69 SAKGFDVVYDINGR-------------------EADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCE-------  119 (287)
Q Consensus        69 ~~~~~d~vi~~a~~-------------------~~~~~~~ll~~~~--~~~-~~i~~Ss~~v~~~~~~~~~~e-------  119 (287)
                      +..++|+|||+|+.                   |+.++.+++++++  +++ +||++||..+||... .+.+|       
T Consensus       133 ~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~~~E~~i~~~~  211 (442)
T PLN02572        133 KSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-IDIEEGYITITH  211 (442)
T ss_pred             HhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CCCccccccccc
Confidence            86679999999854                   2335778888887  664 899999999998642 12222       


Q ss_pred             ----C---CCCCCCcch-hhhHHHHHHhh----hCCCcEEEEecCeeecCCCCC------------------ChhHHHHH
Q 023110          120 ----T---DTVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN------------------PVEEWFFH  169 (287)
Q Consensus       120 ----~---~~~~~~~~~-~~k~~~E~~~~----~~~~~~~ilR~~~v~g~~~~~------------------~~~~~~~~  169 (287)
                          +   .+..|.++| .+|..+|.+++    .++++++++|++++|||++..                  .++..++.
T Consensus       212 ~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~  291 (442)
T PLN02572        212 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCV  291 (442)
T ss_pred             ccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHH
Confidence                2   245666666 99999998773    458999999999999997432                  23455667


Q ss_pred             HHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCC--ceEEecCCcccCHHHHHHHHHHH---hCCCCCeEEeC
Q 023110          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKA---AGFPEPELVHY  244 (287)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~--~~~~i~~~~~~s~~e~~~~i~~~---~g~~~~~~~~~  244 (287)
                      .+..++++.+++++++.++|+|++|+|++++.++++....+  .+||+++ ..+|+.|+++.+++.   +|.+. .+...
T Consensus       292 ~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~~g~~~-~~~~~  369 (442)
T PLN02572        292 QAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEKLGLDV-EVISV  369 (442)
T ss_pred             HHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHHhhCCCC-CeeeC
Confidence            77778888888999999999999999999999998653233  5899987 679999999999999   88654 33333


Q ss_pred             CccccccCCCcccccccccccccchhhhhhcCCCcccc
Q 023110          245 NPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVL  282 (287)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  282 (287)
                      +...        ..........|+ +|+++ |||+|++
T Consensus       370 p~~~--------~~~~~~~~~~d~-~k~~~-LGw~p~~  397 (442)
T PLN02572        370 PNPR--------VEAEEHYYNAKH-TKLCE-LGLEPHL  397 (442)
T ss_pred             CCCc--------ccccccccCccH-HHHHH-cCCCCCC
Confidence            2211        011123455688 89974 9999998

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=2.6e-36  Score=256.54  Aligned_cols=273  Identities=18%  Similarity=0.164  Sum_probs=204.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||+||||++|+++|+++|++|++++|+.... ...+...... ......+++++.+|+.|.+.+.++++..++|+|||+
T Consensus        12 TGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~   90 (340)
T PLN02653         12 TGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYID-PHPNKARMKLHYGDLSDASSLRRWLDDIKPDEVYNL   90 (340)
T ss_pred             ECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccc-cccccCceEEEEecCCCHHHHHHHHHHcCCCEEEEC
Confidence            79999999999999999999999999875431 1111110000 000023588999999999999999986678999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CCc-----cEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHH
Q 023110           80 NGRE----------------ADEVEPILDALP--NLE-----QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (287)
Q Consensus        80 a~~~----------------~~~~~~ll~~~~--~~~-----~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (287)
                      |+..                +.++.++++++.  +.+     +||++||..+||.... +++|+.+..|.+.| .+|..+
T Consensus        91 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~  169 (340)
T PLN02653         91 AAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPRSPYAVAKVAA  169 (340)
T ss_pred             CcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCCChhHHHHHHH
Confidence            9862                234677888876  443     8999999999997655 78898888888777 999999


Q ss_pred             HHHhh----hCCCcEEEEecCeeecCCCCCChh----HHHHHHHHcCCCccC-CCCCCceeeeeeHHHHHHHHHHHHcCC
Q 023110          136 ESVLE----SKGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRPIPI-PGSGIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       136 E~~~~----~~~~~~~ilR~~~v~g~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (287)
                      |.+++    +.++.++..|+.++|||+....++    ..++..+..++++.+ .+++++.++|+|++|+|++++.++++.
T Consensus       170 e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~  249 (340)
T PLN02653        170 HWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQE  249 (340)
T ss_pred             HHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcC
Confidence            99874    457888899999999996433332    333445556665543 488899999999999999999999875


Q ss_pred             ccCCceEEecCCcccCHHHHHHHHHHHhCCCCC-eEEeCCccccccCCCcccccccccccccchhhhhhcCCCccccccc
Q 023110          207 KASRQVFNISGEKYVTFDGLARACAKAAGFPEP-ELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTH  285 (287)
Q Consensus       207 ~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~  285 (287)
                      .  ++.||+++++++|+.|+++.+.+.+|.+.. .+. +...       ...+........|+ +|++++|||+|+++++
T Consensus       250 ~--~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~-~~~~-------~~~~~~~~~~~~d~-~k~~~~lgw~p~~~l~  318 (340)
T PLN02653        250 K--PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVE-IDPR-------YFRPAEVDNLKGDA-SKAREVLGWKPKVGFE  318 (340)
T ss_pred             C--CCcEEecCCCceeHHHHHHHHHHHcCCCCCccee-eCcc-------cCCccccccccCCH-HHHHHHhCCCCCCCHH
Confidence            3  468999999999999999999999986421 111 1111       01122234455788 9999999999999987


Q ss_pred             c
Q 023110          286 T  286 (287)
Q Consensus       286 ~  286 (287)
                      +
T Consensus       319 ~  319 (340)
T PLN02653        319 Q  319 (340)
T ss_pred             H
Confidence            6

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=2.2e-36  Score=257.66  Aligned_cols=270  Identities=15%  Similarity=0.160  Sum_probs=205.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||+++++.|+++|++|++++|+.........     . ......++++.+|+.|.+.+.++++..++|+|||+|
T Consensus        10 tGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-----~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A   83 (349)
T TIGR02622        10 TGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFE-----L-LNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA   83 (349)
T ss_pred             ECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHH-----H-HhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence            7999999999999999999999999998654211110     0 001235778999999999999999876789999999


Q ss_pred             CC----------------CcccHHHHHHhCC--C-CccEEEEecceeeccCCC-CCCCCCCCCCCCcch-hhhHHHHHHh
Q 023110           81 GR----------------EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL-LPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        81 ~~----------------~~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~-~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (287)
                      +.                |+.++.++++++.  + +++||++||..+|+.... .+++|+.+..|.+.| .+|..+|.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  163 (349)
T TIGR02622        84 AQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVI  163 (349)
T ss_pred             cccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHH
Confidence            85                2345778888876  4 679999999999986432 367787777777776 9999999887


Q ss_pred             hh-----------CCCcEEEEecCeeecCCC--CCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC
Q 023110          140 ES-----------KGVNWTSLRPVYIYGPLN--YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       140 ~~-----------~~~~~~ilR~~~v~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (287)
                      +.           .+++++++||+++|||+.  ...+++.+++.+..++++.+ +++++.++|+|++|+|++++.++++.
T Consensus       164 ~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~a~~~~~~~~  242 (349)
T TIGR02622       164 ASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLSGYLLLAEKL  242 (349)
T ss_pred             HHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHHHHHHHHHHH
Confidence            43           289999999999999974  23567888888888887765 57789999999999999999887642


Q ss_pred             ----ccCCceEEecCC--cccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcc
Q 023110          207 ----KASRQVFNISGE--KYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWK  280 (287)
Q Consensus       207 ----~~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p  280 (287)
                          ...++.||++++  +.+|..++++.+.+.++.....+...+.. .       .........+|+ +|++++|||+|
T Consensus       243 ~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~d~-~k~~~~lgw~p  313 (349)
T TIGR02622       243 FTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDL-N-------HPHEARLLKLDS-SKARTLLGWHP  313 (349)
T ss_pred             hhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCC-C-------CCcccceeecCH-HHHHHHhCCCC
Confidence                123579999974  68999999999998876432122221110 0       111123456788 99999999999


Q ss_pred             cccccc
Q 023110          281 VLQTHT  286 (287)
Q Consensus       281 ~~~~~~  286 (287)
                      ++++++
T Consensus       314 ~~~l~~  319 (349)
T TIGR02622       314 RWGLEE  319 (349)
T ss_pred             CCCHHH
Confidence            999876

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=1.3e-35  Score=253.55  Aligned_cols=275  Identities=20%  Similarity=0.217  Sum_probs=204.6

Q ss_pred             CCcccchHHHHHHHHHHcCCe-EEEEEcCCcc-ccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~-V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+||||++|+++|+++|++ |+++++.... ....+....      ....++++.+|+.|.+++.++++..++|+|||
T Consensus         6 TGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (352)
T PRK10084          6 TGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVS------DSERYVFEHADICDRAELDRIFAQHQPDAVMH   79 (352)
T ss_pred             ECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcc------cCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence            799999999999999999976 5555553211 011111000      01357889999999999999998667999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC-----------CCccEEEEecceeeccCC----------CCCCCCCC
Q 023110           79 INGRE----------------ADEVEPILDALP-----------NLEQFIYCSSAGVYLKSD----------LLPHCETD  121 (287)
Q Consensus        79 ~a~~~----------------~~~~~~ll~~~~-----------~~~~~i~~Ss~~v~~~~~----------~~~~~e~~  121 (287)
                      +|+..                +.++.+++++|.           ++++||++||..+|+...          ..+++|++
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~  159 (352)
T PRK10084         80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT  159 (352)
T ss_pred             CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence            99852                335778888874           246899999999998531          12467888


Q ss_pred             CCCCCcch-hhhHHHHHHhh----hCCCcEEEEecCeeecCCCC-CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      +..|.+.| .+|..+|.+++    ..+++++++|++.+|||+.. ..++..++..+..+..+.+++++++.++++|++|+
T Consensus       160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~  239 (352)
T PRK10084        160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (352)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHH
Confidence            88888777 99999998774    45899999999999999853 34566677777777777777888999999999999


Q ss_pred             HHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhc
Q 023110          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLS  275 (287)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  275 (287)
                      |+++..+++++. .++.||+++++..|+.++++.+++.+|...|...+.. ..+  +.....+.......+|+ +|++++
T Consensus       240 a~a~~~~l~~~~-~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~-~~~--~~~~~~~~~~~~~~~d~-~k~~~~  314 (352)
T PRK10084        240 ARALYKVVTEGK-AGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYR-EQI--TYVADRPGHDRRYAIDA-SKISRE  314 (352)
T ss_pred             HHHHHHHHhcCC-CCceEEeCCCCcCcHHHHHHHHHHHhccccccccchh-hhc--cccccCCCCCceeeeCH-HHHHHH
Confidence            999999988644 5789999999999999999999999986432211111 011  11111112223456788 999999


Q ss_pred             CCCcccccccc
Q 023110          276 LTWWKVLQTHT  286 (287)
Q Consensus       276 lg~~p~~~~~~  286 (287)
                      |||+|++++++
T Consensus       315 lg~~p~~~l~~  325 (352)
T PRK10084        315 LGWKPQETFES  325 (352)
T ss_pred             cCCCCcCCHHH
Confidence            99999998876

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=2e-35  Score=248.90  Aligned_cols=268  Identities=22%  Similarity=0.264  Sum_probs=205.8

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      |||||++|++++++|++.|  ++|++++|..... ...+...     . ...+++++.+|+.|++++.++++..++|+||
T Consensus         5 tGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   78 (317)
T TIGR01181         5 TGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADL-----E-DNPRYRFVKGDIGDRELVSRLFTEHQPDAVV   78 (317)
T ss_pred             EcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhh-----c-cCCCcEEEEcCCcCHHHHHHHHhhcCCCEEE
Confidence            7999999999999999987  7899988743211 1111100     0 0236888999999999999999855599999


Q ss_pred             ecCCCC----------------cccHHHHHHhCC--CC-ccEEEEecceeeccCCCC-CCCCCCCCCCCcch-hhhHHHH
Q 023110           78 DINGRE----------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLL-PHCETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        78 ~~a~~~----------------~~~~~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~~-~~~e~~~~~~~~~~-~~k~~~E  136 (287)
                      |+++..                ..++.++++++.  +. .++|++||..+||..... +++|..+..|.+.| .+|..+|
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e  158 (317)
T TIGR01181        79 HFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASD  158 (317)
T ss_pred             EcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHH
Confidence            999752                234667888876  23 489999999999865432 67888887777766 9999999


Q ss_pred             HHhh----hCCCcEEEEecCeeecCCCC-CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCc
Q 023110          137 SVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (287)
Q Consensus       137 ~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (287)
                      .+++    +.+++++++||+.+|||... ..+++.++..+..++++++++++++.++++|++|+|+++..++++.. .++
T Consensus       159 ~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~-~~~  237 (317)
T TIGR01181       159 HLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR-VGE  237 (317)
T ss_pred             HHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC-CCc
Confidence            8764    46899999999999999753 45667777888888877777888899999999999999999997654 568


Q ss_pred             eEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          212 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       212 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +||+++++.+|+.|+++.+.+.+|.+...+...+..          +.....+..++ +|++++|||+|++++++
T Consensus       238 ~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~-~k~~~~lG~~p~~~~~~  301 (317)
T TIGR01181       238 TYNIGGGNERTNLEVVETILELLGKDEDLITHVEDR----------PGHDRRYAIDA-SKIKRELGWAPKYTFEE  301 (317)
T ss_pred             eEEeCCCCceeHHHHHHHHHHHhCCCcccccccCCC----------ccchhhhcCCH-HHHHHHhCCCCCCcHHH
Confidence            999999999999999999999999754222211110          11123335778 99999999999998875

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=8.8e-36  Score=247.70  Aligned_cols=251  Identities=19%  Similarity=0.168  Sum_probs=198.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||+|+++++.|+++|++|++++|+                          .+|+.+.+.+.++++..++|+|||++
T Consensus         5 ~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------------~~d~~~~~~~~~~~~~~~~d~vi~~a   58 (287)
T TIGR01214         5 TGANGQLGRELVQQLSPEGRVVVALTSS--------------------------QLDLTDPEALERLLRAIRPDAVVNTA   58 (287)
T ss_pred             EcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------------ccCCCCHHHHHHHHHhCCCCEEEECC
Confidence            6999999999999999999999999885                          25788999999999866679999999


Q ss_pred             CCC----------------cccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhhC
Q 023110           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~  142 (287)
                      +..                ..++.+++++++ ...+||++||..+|+.....+++|+++..|.+.| .+|..+|.+++..
T Consensus        59 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~  138 (287)
T TIGR01214        59 AYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA  138 (287)
T ss_pred             ccccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh
Confidence            752                224677888876 3358999999999987666789999888887777 9999999999888


Q ss_pred             CCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccC
Q 023110          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       143 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (287)
                      +.+++++||+.+|||+....+...++..+..+.++.+.+  ++.++++|++|+|+++..++..+...+++||+++++.+|
T Consensus       139 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s  216 (287)
T TIGR01214       139 GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCS  216 (287)
T ss_pred             CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcC
Confidence            999999999999999754556666777777776666554  367899999999999999998764467899999999999


Q ss_pred             HHHHHHHHHHHhCCCCCe-----EEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          223 FDGLARACAKAAGFPEPE-----LVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       223 ~~e~~~~i~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +.|+++.+.+.+|++...     +.+.....+.     ..........+|+ +|++++||| +..++++
T Consensus       217 ~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~d~-~~~~~~lg~-~~~~~~~  278 (287)
T TIGR01214       217 WYEFAQAIFEEAGADGLLLHPQEVKPISSKEYP-----RPARRPAYSVLDN-TKLVKTLGT-PLPHWRE  278 (287)
T ss_pred             HHHHHHHHHHHhCcccccccCceeEeecHHHcC-----CCCCCCCccccch-HHHHHHcCC-CCccHHH
Confidence            999999999999976421     1111111100     0011224456899 999999999 4557654

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=3.1e-35  Score=269.88  Aligned_cols=267  Identities=22%  Similarity=0.303  Sum_probs=206.7

Q ss_pred             CCcccchHHHHHHHHHHc--CCeEEEEEcCCcc-ccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      ||||||||++|+++|+++  +++|++++|.... ....+...      ....+++++.+|+.|.+.+..++...++|+||
T Consensus        12 TGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~------~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi   85 (668)
T PLN02260         12 TGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS------KSSPNFKFVKGDIASADLVNYLLITEGIDTIM   85 (668)
T ss_pred             ECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc------ccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence            799999999999999998  6899999885311 11111100      00247899999999998888877555899999


Q ss_pred             ecCCCC----------------cccHHHHHHhCC--C-CccEEEEecceeeccCCCCC---CCCCCCCCCCcch-hhhHH
Q 023110           78 DINGRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLP---HCETDTVDPKSRH-KGKLN  134 (287)
Q Consensus        78 ~~a~~~----------------~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~---~~e~~~~~~~~~~-~~k~~  134 (287)
                      |+|+..                +.++.+++++++  + +++|||+||..+||.....+   ..|+.+..|.+.| .+|..
T Consensus        86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~  165 (668)
T PLN02260         86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAG  165 (668)
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHH
Confidence            999863                234778999987  4 78999999999998754432   3566666777666 99999


Q ss_pred             HHHHhh----hCCCcEEEEecCeeecCCCC-CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccC
Q 023110          135 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       135 ~E~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (287)
                      +|.+++    +.+++++++||++||||++. ..+++.++..+..++++.+++++++.++++|++|+|+++..++++.. .
T Consensus       166 aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~-~  244 (668)
T PLN02260        166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE-V  244 (668)
T ss_pred             HHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCC-C
Confidence            999884    46899999999999999854 34667777788888888888889999999999999999999987654 4


Q ss_pred             CceEEecCCcccCHHHHHHHHHHHhCCCCCe-EEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          210 RQVFNISGEKYVTFDGLARACAKAAGFPEPE-LVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       210 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +++||+++++.+|+.|+++.+++.+|.+... +...+.          .+.....+.+|+ +|++ +|||+|+++++|
T Consensus       245 ~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~----------~p~~~~~~~~d~-~k~~-~lGw~p~~~~~e  310 (668)
T PLN02260        245 GHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVEN----------RPFNDQRYFLDD-QKLK-KLGWQERTSWEE  310 (668)
T ss_pred             CCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCC----------CCCCcceeecCH-HHHH-HcCCCCCCCHHH
Confidence            6799999999999999999999999975422 222111          112234556788 9997 599999999876

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=4.6e-35  Score=227.64  Aligned_cols=259  Identities=21%  Similarity=0.270  Sum_probs=205.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||.||||+||++.|..+||+|++++.-.......+..+.      ....++.+.-|+..+     ++.  .+|.|+|+|
T Consensus        33 tGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~------~~~~fel~~hdv~~p-----l~~--evD~IyhLA   99 (350)
T KOG1429|consen   33 TGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWI------GHPNFELIRHDVVEP-----LLK--EVDQIYHLA   99 (350)
T ss_pred             ecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhc------cCcceeEEEeechhH-----HHH--Hhhhhhhhc
Confidence            7999999999999999999999999987665433332111      146788888887555     566  799999998


Q ss_pred             CC----------------CcccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCC-----CCCCCcch-hhhHHHHH
Q 023110           81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES  137 (287)
Q Consensus        81 ~~----------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~-----~~~~~~~~-~~k~~~E~  137 (287)
                      +.                |..++.+++-.|+ -.+||++.||..|||++...|-.|+-     +..|..-| ..|..+|.
T Consensus       100 apasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~  179 (350)
T KOG1429|consen  100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAET  179 (350)
T ss_pred             cCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHH
Confidence            76                3446777887777 45899999999999986555544442     22333334 89999999


Q ss_pred             Hhh----hCCCcEEEEecCeeecCC---CCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCC
Q 023110          138 VLE----SKGVNWTSLRPVYIYGPL---NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (287)
Q Consensus       138 ~~~----~~~~~~~ilR~~~v~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (287)
                      ++.    +.|+++.|.|+.+.|||+   ....++..++...+.++++.++++|.|+++|.+++|+++.++.+++.+..  
T Consensus       180 L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~--  257 (350)
T KOG1429|consen  180 LCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYR--  257 (350)
T ss_pred             HHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCc--
Confidence            884    568999999999999997   34567788899999999999999999999999999999999999988764  


Q ss_pred             ceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       211 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +-+||+++...|+.|+++.+.+..+-.. .+.......          -.+.+...|+ +++++.|||.|+.+++|
T Consensus       258 ~pvNiGnp~e~Tm~elAemv~~~~~~~s-~i~~~~~~~----------Ddp~kR~pDi-t~ake~LgW~Pkv~L~e  321 (350)
T KOG1429|consen  258 GPVNIGNPGEFTMLELAEMVKELIGPVS-EIEFVENGP----------DDPRKRKPDI-TKAKEQLGWEPKVSLRE  321 (350)
T ss_pred             CCcccCCccceeHHHHHHHHHHHcCCCc-ceeecCCCC----------CCccccCccH-HHHHHHhCCCCCCcHHH
Confidence            3499999999999999999999996544 333333221          1346667899 99999999999999875

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=2e-34  Score=246.29  Aligned_cols=273  Identities=19%  Similarity=0.228  Sum_probs=200.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||+|++|+++|+++|++|++++|............ .........+++++.+|+.|++.+..+++..++|+|||++
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~vih~a   89 (352)
T PLN02240         11 TGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRV-KELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAVIHFA   89 (352)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHH-HHhhcccCccceEEecCcCCHHHHHHHHHhCCCCEEEEcc
Confidence            799999999999999999999999987643211000000 0000001246889999999999999998766899999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhh
Q 023110           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~  141 (287)
                      +..                +.++.+++++|.  ++++||++||..+|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        90 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  169 (352)
T PLN02240         90 GLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRD  169 (352)
T ss_pred             ccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            752                234667888876  6789999999999987666788999888887777 999999998742


Q ss_pred             -----CCCcEEEEecCeeecCCCC----------CChhHHHHHHHHcCC--CccCCC------CCCceeeeeeHHHHHHH
Q 023110          142 -----KGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLKAGR--PIPIPG------SGIQVTQLGHVKDLARA  198 (287)
Q Consensus       142 -----~~~~~~ilR~~~v~g~~~~----------~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~D~a~~  198 (287)
                           .+++++++|++++||++..          ...+..++..+..++  .+.+++      ++.+.++++|++|+|++
T Consensus       170 ~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a  249 (352)
T PLN02240        170 IHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADG  249 (352)
T ss_pred             HHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHH
Confidence                 4688999999999997421          111122344444443  333433      67889999999999999


Q ss_pred             HHHHHcCC----ccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhh
Q 023110          199 FVQVLGNE----KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNL  274 (287)
Q Consensus       199 ~~~~~~~~----~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  274 (287)
                      ++.++.+.    ...+++||+++++.+|++|+++.+.+.+|.+. .+...+..          +........|+ +|+++
T Consensus       250 ~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~----------~~~~~~~~~d~-~k~~~  317 (352)
T PLN02240        250 HIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKI-PLKLAPRR----------PGDAEEVYAST-EKAEK  317 (352)
T ss_pred             HHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCC-CceeCCCC----------CCChhhhhcCH-HHHHH
Confidence            88887542    33457999999999999999999999999765 33332221          11124455788 99999


Q ss_pred             cCCCcccccccc
Q 023110          275 SLTWWKVLQTHT  286 (287)
Q Consensus       275 ~lg~~p~~~~~~  286 (287)
                      +|||+|++++++
T Consensus       318 ~lg~~p~~~l~~  329 (352)
T PLN02240        318 ELGWKAKYGIDE  329 (352)
T ss_pred             HhCCCCCCCHHH
Confidence            999999999876

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=1.3e-34  Score=242.88  Aligned_cols=247  Identities=22%  Similarity=0.233  Sum_probs=189.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|++.|++|+++.+.                         ..+|+.|.+++.++++..++|+|||+|
T Consensus         3 tGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A   57 (306)
T PLN02725          3 AGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------------KELDLTRQADVEAFFAKEKPTYVILAA   57 (306)
T ss_pred             ccCCCcccHHHHHHHHhCCCcEEEeecc-------------------------ccCCCCCHHHHHHHHhccCCCEEEEee
Confidence            7999999999999999999988866432                         137899999999999877899999998


Q ss_pred             CCC-----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCC----CCCCCc-ch-hhhHHH
Q 023110           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKS-RH-KGKLNT  135 (287)
Q Consensus        81 ~~~-----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~----~~~~~~-~~-~~k~~~  135 (287)
                      +..                 ..++.+++++|+  ++++||++||..||+.....+++|++    +..|.+ .| .+|..+
T Consensus        58 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  137 (306)
T PLN02725         58 AKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAG  137 (306)
T ss_pred             eeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHH
Confidence            642                 234778999987  77899999999999976667788876    444543 25 999999


Q ss_pred             HHHh----hhCCCcEEEEecCeeecCCCC-----CChhHHHHHH----HHcCCCccC-CCCCCceeeeeeHHHHHHHHHH
Q 023110          136 ESVL----ESKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHR----LKAGRPIPI-PGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       136 E~~~----~~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      |.++    +..+++++++||+.+|||+..     ..+++.++..    ...+.++.+ ++++.+.++++|++|++++++.
T Consensus       138 e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~  217 (306)
T PLN02725        138 IKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVF  217 (306)
T ss_pred             HHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHH
Confidence            8765    356899999999999999742     2334444432    334555544 6788889999999999999999


Q ss_pred             HHcCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCccc
Q 023110          202 VLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKV  281 (287)
Q Consensus       202 ~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~  281 (287)
                      ++++.. .++.||++++..+|+.|+++.+++.++.+. .+...+..          ........+|+ +|++ +|||+|+
T Consensus       218 ~~~~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~-~~~~~~~~----------~~~~~~~~~d~-~k~~-~lg~~p~  283 (306)
T PLN02725        218 LMRRYS-GAEHVNVGSGDEVTIKELAELVKEVVGFEG-ELVWDTSK----------PDGTPRKLMDS-SKLR-SLGWDPK  283 (306)
T ss_pred             HHhccc-cCcceEeCCCCcccHHHHHHHHHHHhCCCC-ceeecCCC----------CCcccccccCH-HHHH-HhCCCCC
Confidence            998754 346789999999999999999999998754 33321111          00113345788 9997 5999999


Q ss_pred             ccccc
Q 023110          282 LQTHT  286 (287)
Q Consensus       282 ~~~~~  286 (287)
                      +++++
T Consensus       284 ~~~~~  288 (306)
T PLN02725        284 FSLKD  288 (306)
T ss_pred             CCHHH
Confidence            98876

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=4.6e-35  Score=245.68  Aligned_cols=259  Identities=16%  Similarity=0.117  Sum_probs=182.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh---HH-HHhhhhc---CCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DF-VKSSLSA---KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~-~~~~~~~---~~~   73 (287)
                      |||+||||++|+++|+++|++++++.|+..... .              ...+..+|+.|.   +. +..+++.   .++
T Consensus         5 tGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~-~--------------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-K--------------FVNLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             ecCCcHHHHHHHHHHHhCCCceEEEecCCCcch-H--------------HHhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            799999999999999999998888777654311 0              011223455443   32 3333321   269


Q ss_pred             cEEEecCCC--------------CcccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHH
Q 023110           74 DVVYDINGR--------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        74 d~vi~~a~~--------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (287)
                      |+|||+|+.              |..++.+++++|+ ...+|||+||..+|+.....+.+|..+..|.+.| .+|..+|.
T Consensus        70 d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  149 (308)
T PRK11150         70 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDE  149 (308)
T ss_pred             cEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHH
Confidence            999999874              2334778999987 3347999999999997655567787777787766 99999998


Q ss_pred             Hhh----hCCCcEEEEecCeeecCCCCC-C----hhHHHHHHHHcCCCccCC-CCCCceeeeeeHHHHHHHHHHHHcCCc
Q 023110          138 VLE----SKGVNWTSLRPVYIYGPLNYN-P----VEEWFFHRLKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       138 ~~~----~~~~~~~ilR~~~v~g~~~~~-~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (287)
                      +++    +.+++++++||+++|||+... .    ....+...+.+++...++ ++++..++++|++|+|++++.++++..
T Consensus       150 ~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~  229 (308)
T PRK11150        150 YVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV  229 (308)
T ss_pred             HHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC
Confidence            775    358999999999999997532 1    223344566666654333 566778999999999999999887643


Q ss_pred             cCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccc-cccc
Q 023110          208 ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVL-QTHT  286 (287)
Q Consensus       208 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~-~~~~  286 (287)
                        +++||+++++.+|+.|+++.+.+.+|..  .+...+.....      ..........|+ +|+++ +||+|++ ++++
T Consensus       230 --~~~yni~~~~~~s~~el~~~i~~~~~~~--~~~~~~~~~~~------~~~~~~~~~~d~-~k~~~-~g~~p~~~~~~~  297 (308)
T PRK11150        230 --SGIFNCGTGRAESFQAVADAVLAYHKKG--EIEYIPFPDKL------KGRYQAFTQADL-TKLRA-AGYDKPFKTVAE  297 (308)
T ss_pred             --CCeEEcCCCCceeHHHHHHHHHHHhCCC--cceeccCcccc------ccccceecccCH-HHHHh-cCCCCCCCCHHH
Confidence              4699999999999999999999999853  22211111100      000112345788 99986 7999975 7775

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=2.8e-34  Score=235.61  Aligned_cols=232  Identities=24%  Similarity=0.374  Sum_probs=182.3

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCcccc-ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      |||+||+|++|+++|+++|  ++|+++++.+.... ..+..         ....+++.+|++|++++.++++  ++|+||
T Consensus         3 TGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~---------~~~~~~~~~Di~d~~~l~~a~~--g~d~V~   71 (280)
T PF01073_consen    3 TGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQK---------SGVKEYIQGDITDPESLEEALE--GVDVVF   71 (280)
T ss_pred             EcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhc---------ccceeEEEeccccHHHHHHHhc--CCceEE
Confidence            7999999999999999999  79999998876532 11111         1334499999999999999999  999999


Q ss_pred             ecCCC---------------CcccHHHHHHhCC--CCccEEEEecceeeccC-CCCCC---CCCCCC--CCCcch-hhhH
Q 023110           78 DINGR---------------EADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPH---CETDTV--DPKSRH-KGKL  133 (287)
Q Consensus        78 ~~a~~---------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~-~~~~~---~e~~~~--~~~~~~-~~k~  133 (287)
                      |+|+.               |+.++++++++|.  ++++|||+||..+++.. ...++   +|..+.  .+...| .+|.
T Consensus        72 H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~  151 (280)
T PF01073_consen   72 HTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKA  151 (280)
T ss_pred             EeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHH
Confidence            99875               3567999999988  99999999999998762 12222   344332  234456 9999


Q ss_pred             HHHHHhhh-C--------CCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          134 NTESVLES-K--------GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       134 ~~E~~~~~-~--------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      .+|+++.+ .        .+..++|||+.||||++.. +.+.+......+......+++....+++|++|+|.+.+.+.+
T Consensus       152 ~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~-~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~  230 (280)
T PF01073_consen  152 LAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQR-LVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQ  230 (280)
T ss_pred             HHHHHHHhhcccccccccceeEEEEeccEEeCccccc-ccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHH
Confidence            99998743 2        2789999999999997543 345566666666556666888889999999999999988764


Q ss_pred             C-------CccCCceEEecCCcccC-HHHHHHHHHHHhCCCCCeEEeC
Q 023110          205 N-------EKASRQVFNISGEKYVT-FDGLARACAKAAGFPEPELVHY  244 (287)
Q Consensus       205 ~-------~~~~~~~~~i~~~~~~s-~~e~~~~i~~~~g~~~~~~~~~  244 (287)
                      +       ....|+.|+|++++++. ++|++..+.+.+|.+.+...+.
T Consensus       231 ~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~~~~l  278 (280)
T PF01073_consen  231 ALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPKSISL  278 (280)
T ss_pred             HhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCcccCC
Confidence            2       23478999999999998 9999999999999987654443

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=4e-34  Score=243.12  Aligned_cols=268  Identities=22%  Similarity=0.304  Sum_probs=196.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh-hcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||+||||++|+++|+++|++|++++|........+.     .... ...++.++.+|+.|.+++.++++..++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          6 TGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLP-----VIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHH-----HHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            7999999999999999999999999875432111110     0000 023577889999999999999876679999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCC-CCCcch-hhhHHHHHHh
Q 023110           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-DPKSRH-KGKLNTESVL  139 (287)
Q Consensus        80 a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-~~~~~~-~~k~~~E~~~  139 (287)
                      |+..                ..++.+++++|+  ++++||++||..+|+.....+++|+++. .|...| .+|..+|.++
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~  160 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence            8753                124667888877  7789999999999987666678888776 566666 9999999888


Q ss_pred             hh-----CCCcEEEEecCeeecCCCC-----------CChhHHHHHHHHcCC--CccCCC------CCCceeeeeeHHHH
Q 023110          140 ES-----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAGR--PIPIPG------SGIQVTQLGHVKDL  195 (287)
Q Consensus       140 ~~-----~~~~~~ilR~~~v~g~~~~-----------~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~D~  195 (287)
                      +.     .+++++++|++.+|||...           ..+.. ++..+..++  .+.+++      ++.+.++++|++|+
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~  239 (338)
T PRK10675        161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMP-YIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL  239 (338)
T ss_pred             HHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHH-HHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHH
Confidence            53     3688999999999997411           11222 233333332  233322      56788999999999


Q ss_pred             HHHHHHHHcCC--ccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhh
Q 023110          196 ARAFVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGN  273 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~  273 (287)
                      |++++.+++..  ...+++||+++++.+|+.|+++.+.+.+|++. .+...+...          ......+.|+ +|++
T Consensus       240 a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~----------~~~~~~~~~~-~k~~  307 (338)
T PRK10675        240 ADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPV-NYHFAPRRE----------GDLPAYWADA-SKAD  307 (338)
T ss_pred             HHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCC-CeeeCCCCC----------CchhhhhcCH-HHHH
Confidence            99999998752  22457999999999999999999999999765 333322211          1123445788 9999


Q ss_pred             hcCCCcccccccc
Q 023110          274 LSLTWWKVLQTHT  286 (287)
Q Consensus       274 ~~lg~~p~~~~~~  286 (287)
                      ++|||+|++++++
T Consensus       308 ~~lg~~p~~~~~~  320 (338)
T PRK10675        308 RELNWRVTRTLDE  320 (338)
T ss_pred             HHhCCCCcCcHHH
Confidence            9999999998875

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=5.7e-34  Score=239.84  Aligned_cols=263  Identities=20%  Similarity=0.233  Sum_probs=193.5

Q ss_pred             CCcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc--CCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~~~d~vi   77 (287)
                      ||||||||+++++.|.++|+ +|++++|.....  .+..          .....+.+|+.+.+.++.+.+.  .++|+||
T Consensus         4 tGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv   71 (314)
T TIGR02197         4 TGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFLN----------LADLVIADYIDKEDFLDRLEKGAFGKIEAIF   71 (314)
T ss_pred             eCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhhh----------hhheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence            79999999999999999997 788887764321  1110          1123567888888777665531  3799999


Q ss_pred             ecCCCC--------------cccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCC-CCCcch-hhhHHHHHHhh
Q 023110           78 DINGRE--------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-DPKSRH-KGKLNTESVLE  140 (287)
Q Consensus        78 ~~a~~~--------------~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-~~~~~~-~~k~~~E~~~~  140 (287)
                      |+|+..              +.++.+++++|. ...+||++||..+|+.... +.+|++.+ .|.+.| .+|..+|.+++
T Consensus        72 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e~~~~  150 (314)
T TIGR02197        72 HQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFLFDQYVR  150 (314)
T ss_pred             ECccccCccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHHHHHHHH
Confidence            999752              345778888886 3348999999999986543 45666543 466666 99999998875


Q ss_pred             h------CCCcEEEEecCeeecCCCC-----CChhHHHHHHHHcCCCccCC------CCCCceeeeeeHHHHHHHHHHHH
Q 023110          141 S------KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIP------GSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       141 ~------~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      +      .+++++++|++.+|||+..     ..++..++..+..++++.++      +++++.++++|++|+++++..++
T Consensus       151 ~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~  230 (314)
T TIGR02197       151 RRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLL  230 (314)
T ss_pred             HHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHH
Confidence            3      2578999999999999743     13455667777777665543      46778899999999999999999


Q ss_pred             cCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCccccc
Q 023110          204 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQ  283 (287)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~  283 (287)
                      .+ . .+++||+++++++|+.|+++.+.+.+|.+. .+...+.+....+      .......+|+ +|+++++||+|+++
T Consensus       231 ~~-~-~~~~yni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~------~~~~~~~~~~-~k~~~~l~~~p~~~  300 (314)
T TIGR02197       231 EN-G-VSGIFNLGTGRARSFNDLADAVFKALGKDE-KIEYIPMPEALRG------KYQYFTQADI-TKLRAAGYYGPFTT  300 (314)
T ss_pred             hc-c-cCceEEcCCCCCccHHHHHHHHHHHhCCCC-cceeccCcccccc------ccccccccch-HHHHHhcCCCCccc
Confidence            87 3 467999999999999999999999999764 3333322221100      0112345788 99999999999999


Q ss_pred             ccc
Q 023110          284 THT  286 (287)
Q Consensus       284 ~~~  286 (287)
                      +++
T Consensus       301 l~~  303 (314)
T TIGR02197       301 LEE  303 (314)
T ss_pred             HHH
Confidence            886

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.4e-33  Score=237.46  Aligned_cols=261  Identities=28%  Similarity=0.375  Sum_probs=204.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCc-cEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF-DVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~-d~vi~~   79 (287)
                      ||||||||++|++.|+++||+|++++|.........            .++.++.+|+.+.+.+...++  .+ |+|||+
T Consensus         6 tG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~--~~~d~vih~   71 (314)
T COG0451           6 TGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------------SGVEFVVLDLTDRDLVDELAK--GVPDAVIHL   71 (314)
T ss_pred             EcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------------cccceeeecccchHHHHHHHh--cCCCEEEEc
Confidence            799999999999999999999999999877632111            367889999999888888887  55 999999


Q ss_pred             CCCC-----------------cccHHHHHHhCC--CCccEEEEecceeeccC-CCCCCCCC-CCCCCCcch-hhhHHHHH
Q 023110           80 NGRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCET-DTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        80 a~~~-----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~-~~~~~~~~~-~~k~~~E~  137 (287)
                      ++..                 +.++.+++++++  ++++|||.||..+|+.. ...+++|+ .+..|.++| .+|+.+|.
T Consensus        72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~  151 (314)
T COG0451          72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQ  151 (314)
T ss_pred             cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHH
Confidence            8763                 234778899987  89999999988888754 33468888 677777655 99999999


Q ss_pred             Hhhh----CCCcEEEEecCeeecCCCCCC----hhHHHHHHHHcCCC-ccCCCCCCceeeeeeHHHHHHHHHHHHcCCcc
Q 023110          138 VLES----KGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       138 ~~~~----~~~~~~ilR~~~v~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (287)
                      ++..    .+++++++||+++|||+....    +...++.....+.+ +...+++...++++|++|++++++.+++++..
T Consensus       152 ~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  231 (314)
T COG0451         152 LLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG  231 (314)
T ss_pred             HHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC
Confidence            8853    469999999999999986543    44445555666665 55556778889999999999999999998774


Q ss_pred             CCceEEecCCc-ccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          209 SRQVFNISGEK-YVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       209 ~~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      .  .||++++. ..+..|+++.+.+.+|.+.+.+...+.        ...........+++ +|.+++|||+|+.++++
T Consensus       232 ~--~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~lg~~p~~~~~~  299 (314)
T COG0451         232 G--VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPL--------GRRGDLREGKLLDI-SKARAALGWEPKVSLEE  299 (314)
T ss_pred             c--EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCC--------CCCCcccccccCCH-HHHHHHhCCCCCCCHHH
Confidence            3  99999997 899999999999999987643232221        01112234555788 99999999999988765

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=1.1e-33  Score=239.93  Aligned_cols=261  Identities=18%  Similarity=0.182  Sum_probs=186.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccccc-CCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ-LPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||+||||++|+++|+++|++|++++|+....... +.     .+......++++.+|+.|.+.+.++++  ++|+|||+
T Consensus        16 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~   88 (342)
T PLN02214         16 TGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLR-----ELEGGKERLILCKADLQDYEALKAAID--GCDGVFHT   88 (342)
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHH-----HhhCCCCcEEEEecCcCChHHHHHHHh--cCCEEEEe
Confidence            79999999999999999999999999986531100 00     000011358899999999999999998  89999999


Q ss_pred             CCCC-----------cccHHHHHHhCC--CCccEEEEecc-eeeccCCC---CCCCCCC------CCCCCcch-hhhHHH
Q 023110           80 NGRE-----------ADEVEPILDALP--NLEQFIYCSSA-GVYLKSDL---LPHCETD------TVDPKSRH-KGKLNT  135 (287)
Q Consensus        80 a~~~-----------~~~~~~ll~~~~--~~~~~i~~Ss~-~v~~~~~~---~~~~e~~------~~~~~~~~-~~k~~~  135 (287)
                      |+..           +.++.++++++.  ++++||++||. .+|+....   .+++|++      +..|.+.| .+|..+
T Consensus        89 A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~a  168 (342)
T PLN02214         89 ASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVA  168 (342)
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHH
Confidence            9863           446788999987  78899999996 68875322   2467764      23355555 999999


Q ss_pred             HHHhh----hCCCcEEEEecCeeecCCCCCC---hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCcc
Q 023110          136 ESVLE----SKGVNWTSLRPVYIYGPLNYNP---VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       136 E~~~~----~~~~~~~ilR~~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (287)
                      |.++.    +.+++++++||++||||+....   ....++ ....+.... .+  ++.++|||++|+|++++.+++++. 
T Consensus       169 E~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~-~~~~g~~~~-~~--~~~~~~i~V~Dva~a~~~al~~~~-  243 (342)
T PLN02214        169 EQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVL-KYLTGSAKT-YA--NLTQAYVDVRDVALAHVLVYEAPS-  243 (342)
T ss_pred             HHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-CC--CCCcCeeEHHHHHHHHHHHHhCcc-
Confidence            98874    4589999999999999975321   122222 334444332 23  457899999999999999998865 


Q ss_pred             CCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCccccccccC
Q 023110          209 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHTT  287 (287)
Q Consensus       209 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~~  287 (287)
                      .++.||+++ ...++.|+++.+.+.++...     .+... ..+    .........+|+ +|++ +|||+| .+++|+
T Consensus       244 ~~g~yn~~~-~~~~~~el~~~i~~~~~~~~-----~~~~~-~~~----~~~~~~~~~~d~-~k~~-~LG~~p-~~lee~  308 (342)
T PLN02214        244 ASGRYLLAE-SARHRGEVVEILAKLFPEYP-----LPTKC-KDE----KNPRAKPYKFTN-QKIK-DLGLEF-TSTKQS  308 (342)
T ss_pred             cCCcEEEec-CCCCHHHHHHHHHHHCCCCC-----CCCCC-ccc----cCCCCCccccCc-HHHH-HcCCcc-cCHHHH
Confidence            345899987 46899999999999985311     11100 000    011123445788 9998 599999 588863

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=1.2e-34  Score=239.12  Aligned_cols=246  Identities=24%  Similarity=0.280  Sum_probs=185.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+|++|++|.++|.++|++|++++|.                          ..|+.|.+.+.++++..++|+|||||
T Consensus         6 ~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------------~~dl~d~~~~~~~~~~~~pd~Vin~a   59 (286)
T PF04321_consen    6 TGASGFLGSALARALKERGYEVIATSRS--------------------------DLDLTDPEAVAKLLEAFKPDVVINCA   59 (286)
T ss_dssp             ETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------------CS-TTSHHHHHHHHHHH--SEEEE--
T ss_pred             ECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------------hcCCCCHHHHHHHHHHhCCCeEeccc
Confidence            6999999999999999999999999776                          25788999999999977899999999


Q ss_pred             CCC----------------cccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhhC
Q 023110           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~  142 (287)
                      +..                +.++.+++++|. ...++||+||..||++....|++|++++.|.+.| ++|+.+|+.+++.
T Consensus        60 a~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~  139 (286)
T PF04321_consen   60 AYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAA  139 (286)
T ss_dssp             ----HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH
T ss_pred             eeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            873                445778999987 6679999999999998888889999999999887 9999999999876


Q ss_pred             CCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCc---cCCceEEecCCc
Q 023110          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK---ASRQVFNISGEK  219 (287)
Q Consensus       143 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~---~~~~~~~i~~~~  219 (287)
                      .-+++|+|++.+||+ ...++..++++.+..++.+.++.  ++.++.++++|+|+++..++++..   ...++||+++++
T Consensus       140 ~~~~~IlR~~~~~g~-~~~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~  216 (286)
T PF04321_consen  140 CPNALILRTSWVYGP-SGRNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPE  216 (286)
T ss_dssp             -SSEEEEEE-SEESS-SSSSHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS
T ss_pred             cCCEEEEecceeccc-CCCchhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCc
Confidence            669999999999999 44578888889998888887754  578999999999999999998754   245799999999


Q ss_pred             ccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCccc
Q 023110          220 YVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKV  281 (287)
Q Consensus       220 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~  281 (287)
                      .+|+.|+++.+++.+|.+.+.+.+.+...+...     ..++.+..+++ +|+++.||.++.
T Consensus       217 ~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~-----~~rp~~~~L~~-~kl~~~~g~~~~  272 (286)
T PF04321_consen  217 RVSRYEFAEAIAKILGLDPELIKPVSSSEFPRA-----APRPRNTSLDC-RKLKNLLGIKPP  272 (286)
T ss_dssp             -EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTS-----SGS-SBE-B---HHHHHCTTS---
T ss_pred             ccCHHHHHHHHHHHhCCCCceEEecccccCCCC-----CCCCCcccccH-HHHHHccCCCCc
Confidence            999999999999999998877887766654322     22456778999 999999999874

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=3.5e-33  Score=237.16  Aligned_cols=262  Identities=19%  Similarity=0.211  Sum_probs=184.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccc--cCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+||||++|+++|+++|++|++++|+......  .+..     +.. ..+++++.+|+.|.+.+..+++  ++|+|||
T Consensus        15 tG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~-~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih   86 (338)
T PLN00198         15 IGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRA-----LQE-LGDLKIFGADLTDEESFEAPIA--GCDLVFH   86 (338)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHh-----cCC-CCceEEEEcCCCChHHHHHHHh--cCCEEEE
Confidence            7999999999999999999999999988643211  0000     000 1358899999999999999998  8999999


Q ss_pred             cCCCC---------------cccHHHHHHhCC---CCccEEEEecceeeccCC----CCCCCCCC---------CCCCCc
Q 023110           79 INGRE---------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSD----LLPHCETD---------TVDPKS  127 (287)
Q Consensus        79 ~a~~~---------------~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~~----~~~~~e~~---------~~~~~~  127 (287)
                      +|+..               +.++.++++++.   ++++||++||..+|+...    ..+.+|+.         ...|.+
T Consensus        87 ~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~  166 (338)
T PLN00198         87 VATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTW  166 (338)
T ss_pred             eCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccc
Confidence            99842               223567888864   478999999999998532    23444432         234555


Q ss_pred             ch-hhhHHHHHHhh----hCCCcEEEEecCeeecCCCCCC--hhHHHHHHHHcCCCccCCC-CCC----ceeeeeeHHHH
Q 023110          128 RH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPG-SGI----QVTQLGHVKDL  195 (287)
Q Consensus       128 ~~-~~k~~~E~~~~----~~~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~----~~~~~i~~~D~  195 (287)
                      .| .+|..+|.++.    ..+++++++||+++|||+....  ....++..+..++.+.+.+ ++.    ..++++|++|+
T Consensus       167 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~  246 (338)
T PLN00198        167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDV  246 (338)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHH
Confidence            55 99999998764    4689999999999999974321  1111233455666555544 222    24799999999


Q ss_pred             HHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhc
Q 023110          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLS  275 (287)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  275 (287)
                      |++++.++++... ++.| ++++..+|+.|+++.+.+.++.....+..        +..   + .......|+ +|+++ 
T Consensus       247 a~a~~~~~~~~~~-~~~~-~~~~~~~s~~el~~~i~~~~~~~~~~~~~--------~~~---~-~~~~~~~~~-~k~~~-  310 (338)
T PLN00198        247 CRAHIFLAEKESA-SGRY-ICCAANTSVPELAKFLIKRYPQYQVPTDF--------GDF---P-SKAKLIISS-EKLIS-  310 (338)
T ss_pred             HHHHHHHhhCcCc-CCcE-EEecCCCCHHHHHHHHHHHCCCCCCCccc--------ccc---C-CCCccccCh-HHHHh-
Confidence            9999999987643 3467 45557799999999999988642111111        100   0 113445778 99987 


Q ss_pred             CCCcccccccc
Q 023110          276 LTWWKVLQTHT  286 (287)
Q Consensus       276 lg~~p~~~~~~  286 (287)
                      +||+|++++++
T Consensus       311 ~G~~p~~~l~~  321 (338)
T PLN00198        311 EGFSFEYGIEE  321 (338)
T ss_pred             CCceecCcHHH
Confidence            59999999986

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1e-33  Score=225.29  Aligned_cols=272  Identities=23%  Similarity=0.275  Sum_probs=211.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||+|.+-+|+++||.|+++++-.......+....  ++......+.++++|+.|.++++++|+...+|.|+|+|
T Consensus         8 tGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~--~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~Hfa   85 (343)
T KOG1371|consen    8 TGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVR--QLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVMHFA   85 (343)
T ss_pred             ecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHH--HhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEEeeh
Confidence            7999999999999999999999999975544322222110  00101368999999999999999999999999999998


Q ss_pred             CC----------------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCC-CCcch-hhhHHHHHHhh
Q 023110           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD-PKSRH-KGKLNTESVLE  140 (287)
Q Consensus        81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~-~~~~~-~~k~~~E~~~~  140 (287)
                      +.                |+.++.++++.|+  +++.+|+.||+.+||.....|++|+.+.. |.++| .+|...|+++.
T Consensus        86 ~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~  165 (343)
T KOG1371|consen   86 ALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIH  165 (343)
T ss_pred             hhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHH
Confidence            87                3567999999987  89999999999999999999999999988 98888 99999999885


Q ss_pred             ----hCCCcEEEEecCeeec--CCC---------CCChhHHHHHHHHc--------CCCccCCCCCCceeeeeeHHHHHH
Q 023110          141 ----SKGVNWTSLRPVYIYG--PLN---------YNPVEEWFFHRLKA--------GRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       141 ----~~~~~~~ilR~~~v~g--~~~---------~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                          ...+.++.||..+++|  |..         ..+..++....+..        +..... .+++..++++|+-|.|+
T Consensus       166 d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t-~dgt~vrdyi~v~Dla~  244 (343)
T KOG1371|consen  166 DYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTT-IDGTIVRDYIHVLDLAD  244 (343)
T ss_pred             hhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccc-cCCCeeecceeeEehHH
Confidence                3458889999999999  321         11122221111111        222222 25688999999999999


Q ss_pred             HHHHHHcCCcc--CCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhc
Q 023110          198 AFVQVLGNEKA--SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLS  275 (287)
Q Consensus       198 ~~~~~~~~~~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  275 (287)
                      ..+.++.+...  .-++||++++...+..+++.++++..|++.|. ..++.          +......+..+. +++.+|
T Consensus       245 ~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~-~~v~~----------R~gdv~~~ya~~-~~a~~e  312 (343)
T KOG1371|consen  245 GHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKK-KVVPR----------RNGDVAFVYANP-SKAQRE  312 (343)
T ss_pred             HHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCc-cccCC----------CCCCceeeeeCh-HHHHHH
Confidence            99999987542  34599999999999999999999999988733 32222          233446666778 899999


Q ss_pred             CCCccccccccC
Q 023110          276 LTWWKVLQTHTT  287 (287)
Q Consensus       276 lg~~p~~~~~~~  287 (287)
                      |||+|.+.+||+
T Consensus       313 lgwk~~~~iee~  324 (343)
T KOG1371|consen  313 LGWKAKYGLQEM  324 (343)
T ss_pred             hCCccccCHHHH
Confidence            999999998874

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.3e-32  Score=232.63  Aligned_cols=263  Identities=16%  Similarity=0.145  Sum_probs=188.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++++++|+++|++|++++|+....... ...  ........+++++.+|+.|.+.+.++++  ++|+|||+|
T Consensus        11 tG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~--~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih~A   85 (325)
T PLN02989         11 TGASGYIASWIVKLLLFRGYTINATVRDPKDRKKT-DHL--LALDGAKERLKLFKADLLDEGSFELAID--GCETVFHTA   85 (325)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhH-HHH--HhccCCCCceEEEeCCCCCchHHHHHHc--CCCEEEEeC
Confidence            79999999999999999999999999886542110 000  0000002468899999999999999998  899999999


Q ss_pred             CCC----------------cccHHHHHHhCC---CCccEEEEecceeeccC-----CCCCCCCCCCCCCC------cch-
Q 023110           81 GRE----------------ADEVEPILDALP---NLEQFIYCSSAGVYLKS-----DLLPHCETDTVDPK------SRH-  129 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~-----~~~~~~e~~~~~~~------~~~-  129 (287)
                      +..                ..++.++++++.   +.++||++||..+|+..     ...+++|+.+..|.      +.| 
T Consensus        86 ~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~  165 (325)
T PLN02989         86 SPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYV  165 (325)
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchH
Confidence            852                223667888764   45799999998877542     23457888776553      345 


Q ss_pred             hhhHHHHHHhh----hCCCcEEEEecCeeecCCCCC--ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       130 ~~k~~~E~~~~----~~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      .+|..+|.++.    +.+++++++||+++|||+...  .+...++..+..++...  +  .+.++|+|++|+|++++.++
T Consensus       166 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a~~~~l  241 (325)
T PLN02989        166 LSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALAHVKAL  241 (325)
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHHHHHHh
Confidence            99999998874    468999999999999998542  24445555666665431  2  24579999999999999999


Q ss_pred             cCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCccccc
Q 023110          204 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQ  283 (287)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~  283 (287)
                      +++.. ++.||+++ ..+|+.|+++.+.+.++..  .+... ....       ..........|+ +|+++ |||+|.++
T Consensus       242 ~~~~~-~~~~ni~~-~~~s~~ei~~~i~~~~~~~--~~~~~-~~~~-------~~~~~~~~~~~~-~k~~~-lg~~p~~~  307 (325)
T PLN02989        242 ETPSA-NGRYIIDG-PVVTIKDIENVLREFFPDL--CIADR-NEDI-------TELNSVTFNVCL-DKVKS-LGIIEFTP  307 (325)
T ss_pred             cCccc-CceEEEec-CCCCHHHHHHHHHHHCCCC--CCCCC-CCCc-------ccccccCcCCCH-HHHHH-cCCCCCCC
Confidence            87653 45899965 5799999999999999732  11110 0000       011123456788 89885 99999999


Q ss_pred             ccc
Q 023110          284 THT  286 (287)
Q Consensus       284 ~~~  286 (287)
                      +++
T Consensus       308 l~~  310 (325)
T PLN02989        308 TET  310 (325)
T ss_pred             HHH
Confidence            986

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=2.2e-32  Score=231.51  Aligned_cols=268  Identities=20%  Similarity=0.269  Sum_probs=198.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+|++|+++++.|+++|++|++++|........+...     .. ..+++++.+|+.+.+++.++++..++|+|||++
T Consensus         5 ~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a   78 (328)
T TIGR01179         5 TGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRG-----ER-ITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA   78 (328)
T ss_pred             eCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhh-----cc-ccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence            799999999999999999999998876443312111110     00 125778899999999999999866899999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhh-
Q 023110           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-  140 (287)
                      +..                +.++.++++++.  +++++|++||..+|+.....+++|+++..|.+.| .+|..+|.+++ 
T Consensus        79 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~  158 (328)
T TIGR01179        79 GLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRD  158 (328)
T ss_pred             cccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHH
Confidence            852                334667888876  6789999999999987666678888888787766 99999998774 


Q ss_pred             ---h-CCCcEEEEecCeeecCCCC----------CChhHHHHHHHH-cCCCccCC------CCCCceeeeeeHHHHHHHH
Q 023110          141 ---S-KGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLK-AGRPIPIP------GSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       141 ---~-~~~~~~ilR~~~v~g~~~~----------~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~i~~~D~a~~~  199 (287)
                         + .+++++++||+.+|||...          ..+...+..... ....+..+      .++.+.++++|++|+|+++
T Consensus       159 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~  238 (328)
T TIGR01179       159 LSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAH  238 (328)
T ss_pred             HHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHH
Confidence               2 6899999999999998521          123333333332 22333222      3566789999999999999


Q ss_pred             HHHHcCC--ccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCC
Q 023110          200 VQVLGNE--KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLT  277 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg  277 (287)
                      ..++.+.  ...+++||+++++.+|+.|+++.+++.+|++. .+...+...          ........++ +|++++||
T Consensus       239 ~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~-~~~~~~~~~----------~~~~~~~~~~-~~~~~~lg  306 (328)
T TIGR01179       239 LAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDF-PVELAPRRP----------GDPASLVADA-SKIRRELG  306 (328)
T ss_pred             HHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCc-ceEeCCCCC----------ccccchhcch-HHHHHHhC
Confidence            9998752  23567999999999999999999999999865 333322211          0112344678 99999999


Q ss_pred             Cccccc-ccc
Q 023110          278 WWKVLQ-THT  286 (287)
Q Consensus       278 ~~p~~~-~~~  286 (287)
                      |+|+++ +++
T Consensus       307 ~~p~~~~l~~  316 (328)
T TIGR01179       307 WQPKYTDLEI  316 (328)
T ss_pred             CCCCcchHHH
Confidence            999997 765

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=5.2e-33  Score=224.55  Aligned_cols=206  Identities=33%  Similarity=0.478  Sum_probs=179.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||+|++++++|+++|++|+.+.|+........          ...+++++.+|+.|.+.+.++++..++|+|||+|
T Consensus         4 ~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~----------~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a   73 (236)
T PF01370_consen    4 TGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEE----------KKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA   73 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHH----------HHTTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred             EccCCHHHHHHHHHHHHcCCcccccccccccccccc----------ccceEEEEEeeccccccccccccccCceEEEEee
Confidence            699999999999999999999999999887631111          0138899999999999999999976779999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhh-
Q 023110           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-  140 (287)
                      +..                +..+.++++++.  ++++||++||..+|+.....+++|+.+..|.++| .+|...|.+++ 
T Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~  153 (236)
T PF01370_consen   74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRD  153 (236)
T ss_dssp             SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            873                234777888887  7789999999999999877788999988888887 99999998874 


Q ss_pred             ---hCCCcEEEEecCeeecCC----CCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceE
Q 023110          141 ---SKGVNWTSLRPVYIYGPL----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (287)
Q Consensus       141 ---~~~~~~~ilR~~~v~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (287)
                         +.+++++++||+.+|||.    ....+...++..+.+++++.+++++++.++++|++|+|++++.+++++...+++|
T Consensus       154 ~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~y  233 (236)
T PF01370_consen  154 YAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIY  233 (236)
T ss_dssp             HHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEE
T ss_pred             cccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEE
Confidence               458999999999999998    4567888899999999988888999999999999999999999999988678899


Q ss_pred             Eec
Q 023110          214 NIS  216 (287)
Q Consensus       214 ~i~  216 (287)
                      ||+
T Consensus       234 Nig  236 (236)
T PF01370_consen  234 NIG  236 (236)
T ss_dssp             EES
T ss_pred             EeC
Confidence            986

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.5e-32  Score=217.84  Aligned_cols=244  Identities=21%  Similarity=0.199  Sum_probs=207.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||++|++|++|.++|. .+++|++++|..                          .|+.|++.+.+++++.++|+|||+|
T Consensus         6 ~G~~GqLG~~L~~~l~-~~~~v~a~~~~~--------------------------~Ditd~~~v~~~i~~~~PDvVIn~A   58 (281)
T COG1091           6 TGANGQLGTELRRALP-GEFEVIATDRAE--------------------------LDITDPDAVLEVIRETRPDVVINAA   58 (281)
T ss_pred             EcCCChHHHHHHHHhC-CCceEEeccCcc--------------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence            7999999999999999 679999998873                          6889999999999999999999999


Q ss_pred             CCC----------------cccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhhC
Q 023110           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~  142 (287)
                      +..                ..+..+++++|+ -..++||+||..||++....|+.|++.+.|.+.| ++|+..|..+++.
T Consensus        59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~  138 (281)
T COG1091          59 AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAA  138 (281)
T ss_pred             cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHh
Confidence            873                446888999988 5579999999999998888899999999999998 9999999999999


Q ss_pred             CCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccC
Q 023110          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       143 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (287)
                      +-+.+|+|.+++||... .+|...+++....++++....  ++..+.++..|+|+++..++..... +++||+++...+|
T Consensus       139 ~~~~~I~Rtswv~g~~g-~nFv~tml~la~~~~~l~vv~--Dq~gsPt~~~dlA~~i~~ll~~~~~-~~~yH~~~~g~~S  214 (281)
T COG1091         139 GPRHLILRTSWVYGEYG-NNFVKTMLRLAKEGKELKVVD--DQYGSPTYTEDLADAILELLEKEKE-GGVYHLVNSGECS  214 (281)
T ss_pred             CCCEEEEEeeeeecCCC-CCHHHHHHHHhhcCCceEEEC--CeeeCCccHHHHHHHHHHHHhcccc-CcEEEEeCCCccc
Confidence            99999999999999854 668888899999998887754  5888999999999999999988764 3499999988899


Q ss_pred             HHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCccc
Q 023110          223 FDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKV  281 (287)
Q Consensus       223 ~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~  281 (287)
                      |.|+++.|.+..+.+...+.+.....++..     ..++....+++ .|+++.+|+.|.
T Consensus       215 wydfa~~I~~~~~~~~~v~~~~~~~~~~~~-----a~RP~~S~L~~-~k~~~~~g~~~~  267 (281)
T COG1091         215 WYEFAKAIFEEAGVDGEVIEPIASAEYPTP-----AKRPANSSLDT-KKLEKAFGLSLP  267 (281)
T ss_pred             HHHHHHHHHHHhCCCccccccccccccCcc-----CCCCcccccch-HHHHHHhCCCCc
Confidence            999999999999976533334433322211     22456667888 999999998765

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=3.4e-32  Score=232.19  Aligned_cols=264  Identities=17%  Similarity=0.182  Sum_probs=180.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++|+++|+++|++|++++|+...... +....  ........++++.+|+.|.+.+.++++  ++|+|||+|
T Consensus        11 TGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~~--~~~~~~~~~~~v~~Dl~d~~~~~~~~~--~~d~ViH~A   85 (351)
T PLN02650         11 TGASGFIGSWLVMRLLERGYTVRATVRDPANVKK-VKHLL--DLPGATTRLTLWKADLAVEGSFDDAIR--GCTGVFHVA   85 (351)
T ss_pred             eCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHH-HHHHH--hccCCCCceEEEEecCCChhhHHHHHh--CCCEEEEeC
Confidence            7999999999999999999999999998644211 00000  000001257899999999999999998  899999998


Q ss_pred             CCC---------------cccHHHHHHhCC--C-CccEEEEecceeeccCC-CCC-CCCCCC---------CCCCcch-h
Q 023110           81 GRE---------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSD-LLP-HCETDT---------VDPKSRH-K  130 (287)
Q Consensus        81 ~~~---------------~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~-~~~-~~e~~~---------~~~~~~~-~  130 (287)
                      +..               +.++.++++++.  + +++|||+||.++|+... ..+ ++|+..         ..|.+.| .
T Consensus        86 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~  165 (351)
T PLN02650         86 TPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFV  165 (351)
T ss_pred             CCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHH
Confidence            742               234678889876  4 68999999997776432 223 455431         1233345 9


Q ss_pred             hhHHHHHHhh----hCCCcEEEEecCeeecCCCCCChhHHHHHHH--HcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL--KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       131 ~k~~~E~~~~----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      +|..+|.+++    +++++++++||+++|||+........++..+  ..+.... .+. .+.++|+|++|+|++++.+++
T Consensus       166 sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~r~~v~V~Dva~a~~~~l~  243 (351)
T PLN02650        166 SKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAH-YSI-IKQGQFVHLDDLCNAHIFLFE  243 (351)
T ss_pred             HHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccc-cCc-CCCcceeeHHHHHHHHHHHhc
Confidence            9999998763    5689999999999999975433223333222  2232221 222 235799999999999999998


Q ss_pred             CCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccc
Q 023110          205 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQT  284 (287)
Q Consensus       205 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~  284 (287)
                      ++.. ++.| ++++..+|+.|+++.+.+.++..... ...+      +    ..........|+ +|++ +|||+|++++
T Consensus       244 ~~~~-~~~~-i~~~~~~s~~el~~~i~~~~~~~~~~-~~~~------~----~~~~~~~~~~d~-~k~~-~lG~~p~~~l  308 (351)
T PLN02650        244 HPAA-EGRY-ICSSHDATIHDLAKMLREKYPEYNIP-ARFP------G----IDEDLKSVEFSS-KKLT-DLGFTFKYSL  308 (351)
T ss_pred             CcCc-CceE-EecCCCcCHHHHHHHHHHhCcccCCC-CCCC------C----cCcccccccCCh-HHHH-HhCCCCCCCH
Confidence            7653 3478 56667799999999999988632101 0000      0    011123345677 8875 6999999998


Q ss_pred             cc
Q 023110          285 HT  286 (287)
Q Consensus       285 ~~  286 (287)
                      ++
T Consensus       309 ~e  310 (351)
T PLN02650        309 ED  310 (351)
T ss_pred             HH
Confidence            86

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=6.8e-32  Score=227.97  Aligned_cols=261  Identities=15%  Similarity=0.125  Sum_probs=184.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|+...... ....  ........+++++.+|+.|++.+..+++  ++|+|||+|
T Consensus        10 tGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A   84 (322)
T PLN02662         10 TGASGYIASWLVKLLLQRGYTVKATVRDPNDPKK-TEHL--LALDGAKERLHLFKANLLEEGSFDSVVD--GCEGVFHTA   84 (322)
T ss_pred             ECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhh-HHHH--HhccCCCCceEEEeccccCcchHHHHHc--CCCEEEEeC
Confidence            7999999999999999999999999998653110 0000  0000002468899999999999999998  899999999


Q ss_pred             CCC---------------cccHHHHHHhCC---CCccEEEEecce--eeccC---CCCCCCCCCCCCCC------cch-h
Q 023110           81 GRE---------------ADEVEPILDALP---NLEQFIYCSSAG--VYLKS---DLLPHCETDTVDPK------SRH-K  130 (287)
Q Consensus        81 ~~~---------------~~~~~~ll~~~~---~~~~~i~~Ss~~--v~~~~---~~~~~~e~~~~~~~------~~~-~  130 (287)
                      +..               +.++.++++++.   ++++|||+||.+  +|+..   ...+++|+.+..|.      +.| .
T Consensus        85 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~  164 (322)
T PLN02662         85 SPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVL  164 (322)
T ss_pred             CcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHH
Confidence            751               334677888764   578999999976  46532   22356777655442      234 9


Q ss_pred             hhHHHHHHh----hhCCCcEEEEecCeeecCCCCC--ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          131 GKLNTESVL----ESKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       131 ~k~~~E~~~----~~~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      +|..+|.++    ++.+++++++||+++|||+...  .....++..+..+...  .  +++.++|+|++|+|++++.+++
T Consensus       165 sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~i~v~Dva~a~~~~~~  240 (322)
T PLN02662        165 SKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT--F--PNASYRWVDVRDVANAHIQAFE  240 (322)
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc--C--CCCCcCeEEHHHHHHHHHHHhc
Confidence            999999876    3568999999999999997432  2333445555555432  1  2467899999999999999998


Q ss_pred             CCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccc
Q 023110          205 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQT  284 (287)
Q Consensus       205 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~  284 (287)
                      ++... +.||+++ ..+|++|+++.+.+.++...     .+....  .   .. ........|+ +|+++ |||+| +++
T Consensus       241 ~~~~~-~~~~~~g-~~~s~~e~~~~i~~~~~~~~-----~~~~~~--~---~~-~~~~~~~~d~-~k~~~-lg~~~-~~~  304 (322)
T PLN02662        241 IPSAS-GRYCLVE-RVVHYSEVVKILHELYPTLQ-----LPEKCA--D---DK-PYVPTYQVSK-EKAKS-LGIEF-IPL  304 (322)
T ss_pred             CcCcC-CcEEEeC-CCCCHHHHHHHHHHHCCCCC-----CCCCCC--C---cc-ccccccccCh-HHHHH-hCCcc-ccH
Confidence            76533 4788874 77999999999999876421     111100  0   00 1123456888 99985 99997 588


Q ss_pred             cc
Q 023110          285 HT  286 (287)
Q Consensus       285 ~~  286 (287)
                      ++
T Consensus       305 ~~  306 (322)
T PLN02662        305 EV  306 (322)
T ss_pred             HH
Confidence            75

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.1e-31  Score=226.64  Aligned_cols=262  Identities=16%  Similarity=0.185  Sum_probs=183.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++++++|+++|++|++++|+...... +....  .......+++++.+|+.|.+.+.++++  ++|+|||+|
T Consensus        11 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih~A   85 (322)
T PLN02986         11 TGASGYIASWIVKLLLLRGYTVKATVRDLTDRKK-TEHLL--ALDGAKERLKLFKADLLEESSFEQAIE--GCDAVFHTA   85 (322)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHH-HHHHH--hccCCCCceEEEecCCCCcchHHHHHh--CCCEEEEeC
Confidence            7999999999999999999999999998754211 00000  000002468999999999999999998  899999999


Q ss_pred             CCC---------------cccHHHHHHhCC---CCccEEEEecceee--ccC---CCCCCCCCCCCCC------Ccch-h
Q 023110           81 GRE---------------ADEVEPILDALP---NLEQFIYCSSAGVY--LKS---DLLPHCETDTVDP------KSRH-K  130 (287)
Q Consensus        81 ~~~---------------~~~~~~ll~~~~---~~~~~i~~Ss~~v~--~~~---~~~~~~e~~~~~~------~~~~-~  130 (287)
                      +..               +.++.+++++++   +++|||++||.++|  +..   ...+++|+....|      .+.| .
T Consensus        86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~  165 (322)
T PLN02986         86 SPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPL  165 (322)
T ss_pred             CCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHH
Confidence            752               234667888875   57899999998764  332   2234666654332      3445 9


Q ss_pred             hhHHHHHHhh----hCCCcEEEEecCeeecCCCCC--ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       131 ~k~~~E~~~~----~~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      +|..+|.++.    +++++++++||+++|||+...  .+...++.....++..  ++  .+.++++|++|+|++++.+++
T Consensus       166 sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~Dva~a~~~al~  241 (322)
T PLN02986        166 SKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--FN--NRFYRFVDVRDVALAHIKALE  241 (322)
T ss_pred             HHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--CC--CcCcceeEHHHHHHHHHHHhc
Confidence            9999998663    468999999999999997432  2233455555566543  23  456899999999999999998


Q ss_pred             CCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccc
Q 023110          205 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQT  284 (287)
Q Consensus       205 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~  284 (287)
                      ++... +.||+++ +.+|+.|+++.+.+.++. . .+.. ....   +     ........+|+ +|++ +|||+|+ |+
T Consensus       242 ~~~~~-~~yni~~-~~~s~~e~~~~i~~~~~~-~-~~~~-~~~~---~-----~~~~~~~~~d~-~~~~-~lg~~~~-~l  305 (322)
T PLN02986        242 TPSAN-GRYIIDG-PIMSVNDIIDILRELFPD-L-CIAD-TNEE---S-----EMNEMICKVCV-EKVK-NLGVEFT-PM  305 (322)
T ss_pred             CcccC-CcEEEec-CCCCHHHHHHHHHHHCCC-C-CCCC-CCcc---c-----cccccCCccCH-HHHH-HcCCccc-CH
Confidence            87543 4899965 679999999999999863 1 1111 0000   0     00111124788 8886 4999997 88


Q ss_pred             ccC
Q 023110          285 HTT  287 (287)
Q Consensus       285 ~~~  287 (287)
                      +|+
T Consensus       306 ~e~  308 (322)
T PLN02986        306 KSS  308 (322)
T ss_pred             HHH
Confidence            873

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=100.00  E-value=1e-31  Score=223.83  Aligned_cols=259  Identities=22%  Similarity=0.212  Sum_probs=178.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++++++|+++|++|++++|+.........           ..+    .|+.. ..+...+.  ++|+|||++
T Consensus         4 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~----~~~~~-~~~~~~~~--~~D~Vvh~a   65 (292)
T TIGR01777         4 TGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----------EGY----KPWAP-LAESEALE--GADAVINLA   65 (292)
T ss_pred             EcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----------eee----ecccc-cchhhhcC--CCCEEEECC
Confidence            7999999999999999999999999998766321110           111    12222 33455566  899999999


Q ss_pred             CCC------------------cccHHHHHHhCC--CC--ccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHH
Q 023110           81 GRE------------------ADEVEPILDALP--NL--EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        81 ~~~------------------~~~~~~ll~~~~--~~--~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (287)
                      +..                  +.++.+++++++  ++  .+||+.||..+|+.....+++|+.+..+.+++ ..+...|.
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~  145 (292)
T TIGR01777        66 GEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEE  145 (292)
T ss_pred             CCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHH
Confidence            852                  334778888886  44  35777788889997666678888766665554 44445555


Q ss_pred             Hh---hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEE
Q 023110          138 VL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN  214 (287)
Q Consensus       138 ~~---~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~  214 (287)
                      .+   ++.+++++++||+.+|||..  .....+......... ..++++++.++++|++|+|+++..+++++.. +++||
T Consensus       146 ~~~~~~~~~~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~-~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~  221 (292)
T TIGR01777       146 AAQAAEDLGTRVVLLRTGIVLGPKG--GALAKMLPPFRLGLG-GPLGSGRQWFSWIHIEDLVQLILFALENASI-SGPVN  221 (292)
T ss_pred             HhhhchhcCCceEEEeeeeEECCCc--chhHHHHHHHhcCcc-cccCCCCcccccEeHHHHHHHHHHHhcCccc-CCceE
Confidence            43   34579999999999999963  223333322222211 1246788899999999999999999987653 46999


Q ss_pred             ecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccc--cCCCcccccccccccccchhhhhhcCCCccccc-cccC
Q 023110          215 ISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD--FGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQ-THTT  287 (287)
Q Consensus       215 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~-~~~~  287 (287)
                      +++++.+|+.|+++.+++.+|.+.  +..+|.....  ++.......  .....++ +|+++ +||+|+++ ++|+
T Consensus       222 ~~~~~~~s~~di~~~i~~~~g~~~--~~~~p~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~-~g~~~~~~~~~~~  291 (292)
T TIGR01777       222 ATAPEPVRNKEFAKALARALHRPA--FFPVPAFVLRALLGEMADLLL--KGQRVLP-EKLLE-AGFQFQYPDLDEA  291 (292)
T ss_pred             ecCCCccCHHHHHHHHHHHhCCCC--cCcCCHHHHHHHhchhhHHHh--CCccccc-HHHHh-cCCeeeCcChhhc
Confidence            999999999999999999999764  2335544322  222111111  2333456 78875 99999995 7764

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=1.8e-31  Score=225.95  Aligned_cols=265  Identities=18%  Similarity=0.240  Sum_probs=192.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+|++|+++++.|+++|++|++++|+.... ..+.          ..+++++.+|+.|.+++.++++  ++|+|||++
T Consensus         6 tG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~----------~~~~~~~~~D~~~~~~l~~~~~--~~d~vi~~a   72 (328)
T TIGR03466         6 TGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR-RNLE----------GLDVEIVEGDLRDPASLRKAVA--GCRALFHVA   72 (328)
T ss_pred             ECCccchhHHHHHHHHHCCCEEEEEEecCccc-cccc----------cCCceEEEeeCCCHHHHHHHHh--CCCEEEEec
Confidence            79999999999999999999999999986542 1121          2368899999999999999998  899999998


Q ss_pred             CCC--------------cccHHHHHHhCC--CCccEEEEecceeecc-CCCCCCCCCCCCCCC---cch-hhhHHHHHHh
Q 023110           81 GRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPK---SRH-KGKLNTESVL  139 (287)
Q Consensus        81 ~~~--------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~-~~~~~~~e~~~~~~~---~~~-~~k~~~E~~~  139 (287)
                      +..              +.++.++++++.  ++++||++||..+|+. ....+.+|+.+..|.   +.| .+|..+|.++
T Consensus        73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~  152 (328)
T TIGR03466        73 ADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAA  152 (328)
T ss_pred             eecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHH
Confidence            642              335677888876  7889999999999985 344577888776553   345 8999999887


Q ss_pred             hh----CCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEE
Q 023110          140 ES----KGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN  214 (287)
Q Consensus       140 ~~----~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~  214 (287)
                      +.    .+++++++||+.+|||+.... ....++.....+... ...  +...+++|++|+|++++.++++.. .+..|+
T Consensus       153 ~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~v~D~a~a~~~~~~~~~-~~~~~~  228 (328)
T TIGR03466       153 LEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMP-AYV--DTGLNLVHVDDVAEGHLLALERGR-IGERYI  228 (328)
T ss_pred             HHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCc-eee--CCCcceEEHHHHHHHHHHHHhCCC-CCceEE
Confidence            53    589999999999999975422 122233333333322 222  234689999999999999998754 567888


Q ss_pred             ecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccc------------cCCCcccc-----cccccccccchhhhhhcCC
Q 023110          215 ISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD------------FGKKKAFP-----FRDQLRRQSMCSDGNLSLT  277 (287)
Q Consensus       215 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~------------~~~~~~~~-----~~~~~~~~~~~~k~~~~lg  277 (287)
                      ++ ++.+|+.|+++.+.+.+|++. .....+.....            .+......     .......+|+ +|++++||
T Consensus       229 ~~-~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~k~~~~lg  305 (328)
T TIGR03466       229 LG-GENLTLKQILDKLAEITGRPA-PRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSS-AKAVRELG  305 (328)
T ss_pred             ec-CCCcCHHHHHHHHHHHhCCCC-CCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCCh-HHHHHHcC
Confidence            86 578999999999999999865 33333332110            01110000     0113456788 99999999


Q ss_pred             Ccccccccc
Q 023110          278 WWKVLQTHT  286 (287)
Q Consensus       278 ~~p~~~~~~  286 (287)
                      |+|. ++++
T Consensus       306 ~~p~-~~~~  313 (328)
T TIGR03466       306 YRQR-PARE  313 (328)
T ss_pred             CCCc-CHHH
Confidence            9995 8875

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.9e-31  Score=227.72  Aligned_cols=262  Identities=17%  Similarity=0.174  Sum_probs=179.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++++++|+++|++|++++|+..........     +.. ..+++++.+|+.+.+.+.++++  ++|+|||+|
T Consensus        16 tG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-----~~~-~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A   87 (353)
T PLN02896         16 TGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSK-----WKE-GDRLRLFRADLQEEGSFDEAVK--GCDGVFHVA   87 (353)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh-----hcc-CCeEEEEECCCCCHHHHHHHHc--CCCEEEECC
Confidence            79999999999999999999999999876542111110     000 2468899999999999999998  899999999


Q ss_pred             CCCc-----------------------ccHHHHHHhCC---CCccEEEEecceeeccCC-----CCCCCCCCCC------
Q 023110           81 GREA-----------------------DEVEPILDALP---NLEQFIYCSSAGVYLKSD-----LLPHCETDTV------  123 (287)
Q Consensus        81 ~~~~-----------------------~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~~-----~~~~~e~~~~------  123 (287)
                      +...                       .++.+++++|.   ++++||++||..+|+...     ..+++|+...      
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~  167 (353)
T PLN02896         88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW  167 (353)
T ss_pred             ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence            7521                       23567788875   378999999999998532     1345665211      


Q ss_pred             ---CCCcch-hhhHHHHHHhh----hCCCcEEEEecCeeecCCCCCChhHHHHHHHH---cCCCc--cCCCC---CCcee
Q 023110          124 ---DPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK---AGRPI--PIPGS---GIQVT  187 (287)
Q Consensus       124 ---~~~~~~-~~k~~~E~~~~----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~---~~~~~--~~~~~---~~~~~  187 (287)
                         .+...| .+|..+|.++.    ..+++++++||++||||+.... .+.++..+.   .+...  ...+.   ....+
T Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  246 (353)
T PLN02896        168 NTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPS-VPSSIQVLLSPITGDSKLFSILSAVNSRMGSI  246 (353)
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCC-CCchHHHHHHHhcCCccccccccccccccCce
Confidence               122245 99999998763    4689999999999999975432 223333222   23221  11111   11246


Q ss_pred             eeeeHHHHHHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCccccccccccccc
Q 023110          188 QLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQS  267 (287)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (287)
                      +|+|++|+|++++.+++++.. ++.|++ ++..+|+.|+++.+.+.++...+.+...+..          . .......+
T Consensus       247 dfi~v~Dva~a~~~~l~~~~~-~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~----------~-~~~~~~~~  313 (353)
T PLN02896        247 ALVHIEDICDAHIFLMEQTKA-EGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRLDEEK----------R-GSIPSEIS  313 (353)
T ss_pred             eEEeHHHHHHHHHHHHhCCCc-CccEEe-cCCCCCHHHHHHHHHHhCCCCCccccccccc----------c-CccccccC
Confidence            999999999999999987543 347854 5677999999999999987432121111100          0 01122357


Q ss_pred             chhhhhhcCCCcccccccc
Q 023110          268 MCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       268 ~~~k~~~~lg~~p~~~~~~  286 (287)
                      + ++++ +|||+|++++++
T Consensus       314 ~-~~~~-~lGw~p~~~l~~  330 (353)
T PLN02896        314 S-KKLR-DLGFEYKYGIEE  330 (353)
T ss_pred             H-HHHH-HcCCCccCCHHH
Confidence            7 8886 599999999876

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=5.4e-32  Score=227.57  Aligned_cols=252  Identities=16%  Similarity=0.142  Sum_probs=186.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||+|++|+++|+++||+|++++|+.+.. ..+.          ..+++++.+|+.|++++.++++  ++|+|||++
T Consensus         6 tGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~-~~l~----------~~~v~~v~~Dl~d~~~l~~al~--g~d~Vi~~~   72 (317)
T CHL00194          6 IGATGTLGRQIVRQALDEGYQVRCLVRNLRKA-SFLK----------EWGAELVYGDLSLPETLPPSFK--GVTAIIDAS   72 (317)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh-hhHh----------hcCCEEEECCCCCHHHHHHHHC--CCCEEEECC
Confidence            79999999999999999999999999986542 1111          2478999999999999999999  899999997


Q ss_pred             CCC-----------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCCCcEE
Q 023110           81 GRE-----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWT  147 (287)
Q Consensus        81 ~~~-----------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~  147 (287)
                      +..           ..++.+++++++  +++|||++||.+....            ....+..+|..+|.++++.+++++
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~------------~~~~~~~~K~~~e~~l~~~~l~~t  140 (317)
T CHL00194         73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQY------------PYIPLMKLKSDIEQKLKKSGIPYT  140 (317)
T ss_pred             CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccccc------------CCChHHHHHHHHHHHHHHcCCCeE
Confidence            642           235688999987  8899999999643210            011234889999999999999999


Q ss_pred             EEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccCHHHHH
Q 023110          148 SLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA  227 (287)
Q Consensus       148 ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~  227 (287)
                      ++||+.+|+..     ...+...+..+.++.+ .++.+.++++|++|+|++++.+++++...+++||+++++.+|+.|++
T Consensus       141 ilRp~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~  214 (317)
T CHL00194        141 IFRLAGFFQGL-----ISQYAIPILEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEII  214 (317)
T ss_pred             EEeecHHhhhh-----hhhhhhhhccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHHHH
Confidence            99999888641     1112222333444444 34567789999999999999999876667889999999999999999


Q ss_pred             HHHHHHhCCCCCeEEeCCccccccCC---------Ccc-cc------c-ccccccccchhhhhhcCCCccc--cccc
Q 023110          228 RACAKAAGFPEPELVHYNPKEFDFGK---------KKA-FP------F-RDQLRRQSMCSDGNLSLTWWKV--LQTH  285 (287)
Q Consensus       228 ~~i~~~~g~~~~~~~~~~~~~~~~~~---------~~~-~~------~-~~~~~~~~~~~k~~~~lg~~p~--~~~~  285 (287)
                      +.+.+.+|++. .+.+.|.....+..         ... ..      . .......+. +++.+.||+.|.  .+++
T Consensus       215 ~~~~~~~g~~~-~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~g~~p~~~~~~~  289 (317)
T CHL00194        215 SLCEQLSGQKA-KISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSM-AELYKIFKIDPNELISLE  289 (317)
T ss_pred             HHHHHHhCCCC-eEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCH-HHHHHHhCCChhhhhhHH
Confidence            99999999875 66777765442110         000 00      0 111233345 688889999984  4444

>PLN02686 cinnamoyl-CoA reductase

Probab=99.98  E-value=2.1e-31  Score=227.74  Aligned_cols=267  Identities=18%  Similarity=0.185  Sum_probs=187.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCCh-hhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-QEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||+||||++|++.|+++|++|++++|+..... .+..+.. ........+++++.+|+.|.+.+.++++  ++|.|||+
T Consensus        59 TGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~-~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~--~~d~V~hl  135 (367)
T PLN02686         59 TGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKE-KLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD--GCAGVFHT  135 (367)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH--hccEEEec
Confidence            799999999999999999999999988754321 1110000 0000001257889999999999999998  89999999


Q ss_pred             CCC----------------CcccHHHHHHhCC---CCccEEEEecc--eeeccC--CC--CCCCCCC------CCCCCcc
Q 023110           80 NGR----------------EADEVEPILDALP---NLEQFIYCSSA--GVYLKS--DL--LPHCETD------TVDPKSR  128 (287)
Q Consensus        80 a~~----------------~~~~~~~ll~~~~---~~~~~i~~Ss~--~v~~~~--~~--~~~~e~~------~~~~~~~  128 (287)
                      ++.                ++.++.+++++|.   ++++|||+||.  .+|+..  ..  ..++|+.      +..|.+.
T Consensus       136 A~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~  215 (367)
T PLN02686        136 SAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLW  215 (367)
T ss_pred             CeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccch
Confidence            764                1234778999975   68999999996  477642  11  2345543      2334445


Q ss_pred             h-hhhHHHHHHhh----hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          129 H-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       129 ~-~~k~~~E~~~~----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      | .+|..+|.++.    ..+++++++||+++|||+........++ ....+. +.+++++  .++++|++|+|++++.++
T Consensus       216 Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~-~~~~g~-~~~~g~g--~~~~v~V~Dva~A~~~al  291 (367)
T PLN02686        216 YALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATI-AYLKGA-QEMLADG--LLATADVERLAEAHVCVY  291 (367)
T ss_pred             HHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHH-HHhcCC-CccCCCC--CcCeEEHHHHHHHHHHHH
Confidence            5 99999999873    4689999999999999975322112223 344443 4455554  357999999999999999


Q ss_pred             cCC--ccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCccc
Q 023110          204 GNE--KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKV  281 (287)
Q Consensus       204 ~~~--~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~  281 (287)
                      +..  ...+++| +++++.+|+.|+++.+.+.+|.+.+ +...+..         .+.....+.+|+ +|++++|||+|+
T Consensus       292 ~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~-~~~~~~~---------~~~d~~~~~~d~-~kl~~~l~~~~~  359 (367)
T PLN02686        292 EAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPIN-KIAGNSS---------SDDTPARFELSN-KKLSRLMSRTRR  359 (367)
T ss_pred             hccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCC-cCCCchh---------hcCCcccccccH-HHHHHHHHHhhh
Confidence            752  2345678 8888999999999999999997642 2211111         012346677899 999999999998


Q ss_pred             ccccc
Q 023110          282 LQTHT  286 (287)
Q Consensus       282 ~~~~~  286 (287)
                      ...++
T Consensus       360 ~~~~~  364 (367)
T PLN02686        360 CCYDE  364 (367)
T ss_pred             ccccc
Confidence            76554

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.98  E-value=1.9e-30  Score=210.12  Aligned_cols=224  Identities=19%  Similarity=0.200  Sum_probs=168.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccc--cCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++++++|+++||.|++++|+++....  .+.+     ++........+.+|+.|++++.++++  +||.|||
T Consensus        12 TGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~-----l~~a~~~l~l~~aDL~d~~sf~~ai~--gcdgVfH   84 (327)
T KOG1502|consen   12 TGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRK-----LEGAKERLKLFKADLLDEGSFDKAID--GCDGVFH   84 (327)
T ss_pred             eCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHh-----cccCcccceEEeccccccchHHHHHh--CCCEEEE
Confidence            7999999999999999999999999999887321  1221     11113458899999999999999999  9999999


Q ss_pred             cCCC---------------CcccHHHHHHhCC---CCccEEEEecceeecc-----CCCCCCCCCCCCCCC------cch
Q 023110           79 INGR---------------EADEVEPILDALP---NLEQFIYCSSAGVYLK-----SDLLPHCETDTVDPK------SRH  129 (287)
Q Consensus        79 ~a~~---------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~-----~~~~~~~e~~~~~~~------~~~  129 (287)
                      +|.+               .+.++.|++++|.   .++||||+||......     .....++|+...++.      ..|
T Consensus        85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y  164 (327)
T KOG1502|consen   85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY  164 (327)
T ss_pred             eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence            9987               2457999999998   4899999999876432     122345555432221      234


Q ss_pred             -hhhHHHHHHh----hhCCCcEEEEecCeeecCCCCC--ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 -KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 -~~k~~~E~~~----~~~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                       .+|..+|+..    ++.+++.+.+-|+.|+||.-..  +.....+-...+|..-..   .+....++|++|+|.+.+.+
T Consensus       165 ~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~---~n~~~~~VdVrDVA~AHv~a  241 (327)
T KOG1502|consen  165 ALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETY---PNFWLAFVDVRDVALAHVLA  241 (327)
T ss_pred             HHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccC---CCCceeeEeHHHHHHHHHHH
Confidence             8899888754    5678999999999999997433  222334444555543222   22345699999999999999


Q ss_pred             HcCCccCCceEEecCCcccCHHHHHHHHHHHhCC
Q 023110          203 LGNEKASRQVFNISGEKYVTFDGLARACAKAAGF  236 (287)
Q Consensus       203 ~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~  236 (287)
                      ++++... ++|.+.+.. .++.|+++.+.+.+..
T Consensus       242 ~E~~~a~-GRyic~~~~-~~~~ei~~~l~~~~P~  273 (327)
T KOG1502|consen  242 LEKPSAK-GRYICVGEV-VSIKEIADILRELFPD  273 (327)
T ss_pred             HcCcccC-ceEEEecCc-ccHHHHHHHHHHhCCC
Confidence            9998855 588888855 5699999999998864

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.97  E-value=2.9e-30  Score=217.47  Aligned_cols=244  Identities=16%  Similarity=0.221  Sum_probs=182.3

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+|+||++++++|+++|  ++|++++|+...... +..    ..  ...+++++.+|+.|.+.+.++++  ++|+|||
T Consensus        10 TGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~-~~~----~~--~~~~~~~v~~Dl~d~~~l~~~~~--~iD~Vih   80 (324)
T TIGR03589        10 TGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWE-MQQ----KF--PAPCLRFFIGDVRDKERLTRALR--GVDYVVH   80 (324)
T ss_pred             eCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHH-HHH----Hh--CCCcEEEEEccCCCHHHHHHHHh--cCCEEEE
Confidence            7999999999999999986  789999987543211 100    00  02468899999999999999998  8999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHh
Q 023110           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        79 ~a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (287)
                      +|+..                +.++.++++++.  ++++||++||...              ..|.++| .+|..+|.++
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~--------------~~p~~~Y~~sK~~~E~l~  146 (324)
T TIGR03589        81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA--------------ANPINLYGATKLASDKLF  146 (324)
T ss_pred             CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC--------------CCCCCHHHHHHHHHHHHH
Confidence            99852                235778888876  6789999999542              2233445 9999999876


Q ss_pred             h-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCC-CccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCc
Q 023110          140 E-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (287)
Q Consensus       140 ~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (287)
                      +       ..+++++++|||++|||+.  .+++.+...+..+. ++++. ++.+.++|+|++|++++++.++++.. .++
T Consensus       147 ~~~~~~~~~~gi~~~~lR~g~v~G~~~--~~i~~~~~~~~~~~~~~~i~-~~~~~r~~i~v~D~a~a~~~al~~~~-~~~  222 (324)
T TIGR03589       147 VAANNISGSKGTRFSVVRYGNVVGSRG--SVVPFFKSLKEEGVTELPIT-DPRMTRFWITLEQGVNFVLKSLERML-GGE  222 (324)
T ss_pred             HHHHhhccccCcEEEEEeecceeCCCC--CcHHHHHHHHHhCCCCeeeC-CCCceEeeEEHHHHHHHHHHHHhhCC-CCC
Confidence            3       3589999999999999963  45666777766665 45553 67788999999999999999998753 456


Q ss_pred             eEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCccccccccC
Q 023110          212 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHTT  287 (287)
Q Consensus       212 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~~  287 (287)
                      +| ++++..++..|+++.+.+....   ........+           ......+|+ +|++++|||+|+++++++
T Consensus       223 ~~-~~~~~~~sv~el~~~i~~~~~~---~~~~~~~g~-----------~~~~~~~~~-~~~~~~lg~~~~~~l~~~  282 (324)
T TIGR03589       223 IF-VPKIPSMKITDLAEAMAPECPH---KIVGIRPGE-----------KLHEVMITE-DDARHTYELGDYYAILPS  282 (324)
T ss_pred             EE-ccCCCcEEHHHHHHHHHhhCCe---eEeCCCCCc-----------hhHhhhcCh-hhhhhhcCCCCeEEEccc
Confidence            77 5666679999999999986532   111111110           013345788 999999999999999864

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.97  E-value=6.4e-30  Score=211.12  Aligned_cols=274  Identities=18%  Similarity=0.203  Sum_probs=206.1

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+||+|++|+++|++++  .+|++++..+......-+     ........++++.+|+.|...+..++.  ++ .|+|
T Consensus        10 tGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e-----~~~~~~~~v~~~~~D~~~~~~i~~a~~--~~-~Vvh   81 (361)
T KOG1430|consen   10 TGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAE-----LTGFRSGRVTVILGDLLDANSISNAFQ--GA-VVVH   81 (361)
T ss_pred             ECCccHHHHHHHHHHHhcccccEEEEeccCccccccchh-----hhcccCCceeEEecchhhhhhhhhhcc--Cc-eEEE
Confidence            7999999999999999998  899999988753110000     000014689999999999999999998  88 7777


Q ss_pred             cCCC----------------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCC-CCCCCCC--CCCcch-hhhHHHH
Q 023110           79 INGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLP-HCETDTV--DPKSRH-KGKLNTE  136 (287)
Q Consensus        79 ~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~-~~e~~~~--~~~~~~-~~k~~~E  136 (287)
                      +++.                |+.+|.+++++|.  +++++||+||..|........ .+|+.+.  ....+| .+|..+|
T Consensus        82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE  161 (361)
T KOG1430|consen   82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE  161 (361)
T ss_pred             eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence            7654                5778999999998  999999999999986543322 2333322  222345 9999999


Q ss_pred             HHhhhCC----CcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc-----CCc
Q 023110          137 SVLESKG----VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG-----NEK  207 (287)
Q Consensus       137 ~~~~~~~----~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~-----~~~  207 (287)
                      +++++.+    +..+++||+.||||++. .+.+.+...+..+..+...+++....++++++.++.+.+.+..     .+.
T Consensus       162 ~~Vl~an~~~~l~T~aLR~~~IYGpgd~-~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~  240 (361)
T KOG1430|consen  162 KLVLEANGSDDLYTCALRPPGIYGPGDK-RLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPS  240 (361)
T ss_pred             HHHHHhcCCCCeeEEEEccccccCCCCc-cccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCc
Confidence            9986433    78999999999999864 3567778888888887777888889999999999888777642     344


Q ss_pred             cCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccc------------cCCCccccc--------cccccccc
Q 023110          208 ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD------------FGKKKAFPF--------RDQLRRQS  267 (287)
Q Consensus       208 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~------------~~~~~~~~~--------~~~~~~~~  267 (287)
                      ..|+.|+|.++.++...+++..+.+.+|...+....+|.....            +++  ..+.        ......++
T Consensus       241 ~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p--~~p~lt~~~v~~~~~~~~f~  318 (361)
T KOG1430|consen  241 VNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRP--YQPILTRFRVALLGVTRTFS  318 (361)
T ss_pred             cCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccC--CCCCcChhheeeeccccccC
Confidence            5899999999999988888889999999988644555544332            121  1111        11244466


Q ss_pred             chhhhhhcCCCcccccccc
Q 023110          268 MCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       268 ~~~k~~~~lg~~p~~~~~~  286 (287)
                      + +|++++|||+|..++++
T Consensus       319 ~-~kA~~~lgY~P~~~~~e  336 (361)
T KOG1430|consen  319 I-EKAKRELGYKPLVSLEE  336 (361)
T ss_pred             H-HHHHHhhCCCCcCCHHH
Confidence            7 99999999999999876

>PRK05865 hypothetical protein; Provisional

Probab=99.97  E-value=1.4e-29  Score=231.36  Aligned_cols=232  Identities=20%  Similarity=0.246  Sum_probs=174.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++++++|+++|++|++++|+....   .           ..+++++.+|+.|.+.+.++++  ++|+|||+|
T Consensus         6 TGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~-----------~~~v~~v~gDL~D~~~l~~al~--~vD~VVHlA   69 (854)
T PRK05865          6 TGASGVLGRGLTARLLSQGHEVVGIARHRPDS---W-----------PSSADFIAADIRDATAVESAMT--GADVVAHCA   69 (854)
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---c-----------ccCceEEEeeCCCHHHHHHHHh--CCCEEEECC
Confidence            79999999999999999999999999975321   1           1367899999999999999998  899999999


Q ss_pred             CCC-------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCCCcEEEEec
Q 023110           81 GRE-------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRP  151 (287)
Q Consensus        81 ~~~-------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~ilR~  151 (287)
                      +..       +.++.+++++|+  ++++||++||..                        |..+|.++.+++++++++||
T Consensus        70 a~~~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------------------------K~aaE~ll~~~gl~~vILRp  125 (854)
T PRK05865         70 WVRGRNDHINIDGTANVLKAMAETGTGRIVFTSSGH------------------------QPRVEQMLADCGLEWVAVRC  125 (854)
T ss_pred             CcccchHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------------------------HHHHHHHHHHcCCCEEEEEe
Confidence            763       456888999987  778999999843                        78899999889999999999


Q ss_pred             CeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHH
Q 023110          152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (287)
Q Consensus       152 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~  231 (287)
                      +++|||+.     ..++..... .++...+++...++++|++|+|+++..++++....+++||+++++.+|+.|+++.+.
T Consensus       126 ~~VYGP~~-----~~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~  199 (854)
T PRK05865        126 ALIFGRNV-----DNWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALG  199 (854)
T ss_pred             ceEeCCCh-----HHHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHh
Confidence            99999952     223333332 222233455667899999999999999987654456799999999999999999988


Q ss_pred             HHhCC-CCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          232 KAAGF-PEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       232 ~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +.... +. ...      ...+..............|+ +|++++|||+|++++++
T Consensus       200 ~~~~~v~~-~~~------~~~~~~~~~~~~~~~~~~D~-sKar~~LGw~P~~sLee  247 (854)
T PRK05865        200 RPMVPIGS-PVL------RRVTSFAELELLHSAPLMDV-TLLRDRWGFQPAWNAEE  247 (854)
T ss_pred             hhhccCCc-hhh------hhccchhhhhcccCCccCCH-HHHHHHhCCCCCCCHHH
Confidence            75321 11 000      00010000001112345788 99999999999999876

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.97  E-value=5e-29  Score=194.24  Aligned_cols=281  Identities=18%  Similarity=0.157  Sum_probs=211.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||-||+-|+.|++.|+++||+|+++.|..+......-.+...... ....+.++.+|+.|...+..+++..++|.|+|++
T Consensus         8 TGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~-~~~~l~l~~gDLtD~~~l~r~l~~v~PdEIYNLa   86 (345)
T COG1089           8 TGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHL-NDPRLHLHYGDLTDSSNLLRILEEVQPDEIYNLA   86 (345)
T ss_pred             ecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceecccccc-CCceeEEEeccccchHHHHHHHHhcCchhheecc
Confidence            799999999999999999999999999865422110011110000 0245889999999999999999999999999999


Q ss_pred             CCC----------------cccHHHHHHhCC--C--CccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHh
Q 023110           81 GRE----------------ADEVEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (287)
                      +++                ..++.++|++++  +  ..||...||...||.....|.+|.+|..|.++| .+|+.+-.+.
T Consensus        87 AQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~t  166 (345)
T COG1089          87 AQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWIT  166 (345)
T ss_pred             ccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHHhee
Confidence            884                335889999987  3  468999999999999888899999999999998 8998876544


Q ss_pred             ----hhCCCcEEEEecCeeecCCCCCChhHHH----HHHHHcC-CCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCC
Q 023110          140 ----ESKGVNWTSLRPVYIYGPLNYNPVEEWF----FHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (287)
Q Consensus       140 ----~~~~~~~~ilR~~~v~g~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (287)
                          +.+|+-.|.=.+.+--+|.....|+..-    +..+..| +.....|+-+..+||-|..|.+++++.+++++.  .
T Consensus       167 vNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~--P  244 (345)
T COG1089         167 VNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEE--P  244 (345)
T ss_pred             eehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCC--C
Confidence                4678888877777766776443343332    2333334 233445888999999999999999999999986  3


Q ss_pred             ceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCcc-----------ccccCCCcccccccccccccchhhhhhcCCCc
Q 023110          211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPK-----------EFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWW  279 (287)
Q Consensus       211 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~  279 (287)
                      +.|++++++..|.+|+++.-.+..|++. ........           ...+.+...+|....-...|. +|++++|||+
T Consensus       245 ddyViATg~t~sVrefv~~Af~~~g~~l-~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp-~KA~~~LGW~  322 (345)
T COG1089         245 DDYVIATGETHSVREFVELAFEMVGIDL-EWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDP-TKAKEKLGWR  322 (345)
T ss_pred             CceEEecCceeeHHHHHHHHHHHcCceE-EEeeccccccccccccCceeEEECccccCchhhhhhcCCH-HHHHHHcCCc
Confidence            7899999999999999999999999654 32110000           011122223444455666788 9999999999


Q ss_pred             ccccccc
Q 023110          280 KVLQTHT  286 (287)
Q Consensus       280 p~~~~~~  286 (287)
                      |+++++|
T Consensus       323 ~~~~~~e  329 (345)
T COG1089         323 PEVSLEE  329 (345)
T ss_pred             cccCHHH
Confidence            9999986

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.96  E-value=1.4e-28  Score=191.86  Aligned_cols=252  Identities=23%  Similarity=0.261  Sum_probs=178.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||+||++|+.+|.+.||+|++++|++......+.           ..+.       ..+.+.+... .++|+|||+|
T Consensus         4 TGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-----------~~v~-------~~~~~~~~~~-~~~DavINLA   64 (297)
T COG1090           4 TGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-----------PNVT-------LWEGLADALT-LGIDAVINLA   64 (297)
T ss_pred             eccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-----------cccc-------ccchhhhccc-CCCCEEEECC
Confidence            7999999999999999999999999999887433321           1221       1223333333 2699999999


Q ss_pred             CCCcc------------------cHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCCCcc-h--hhhHHH
Q 023110           81 GREAD------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR-H--KGKLNT  135 (287)
Q Consensus        81 ~~~~~------------------~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~-~--~~k~~~  135 (287)
                      |.++.                  .|+.|.+++.    +.+.+|.-|.++.||......++|+.++. .+. .  +..++-
T Consensus        65 G~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g-~~Fla~lc~~WE~  143 (297)
T COG1090          65 GEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPG-DDFLAQLCQDWEE  143 (297)
T ss_pred             CCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCC-CChHHHHHHHHHH
Confidence            98642                  3666766643    66788888889999999888899994433 222 2  333433


Q ss_pred             HHHh-hhCCCcEEEEecCeeecCCCCCChhHHHHHH--HHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCce
Q 023110          136 ESVL-ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR--LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV  212 (287)
Q Consensus       136 E~~~-~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~  212 (287)
                      |..- +..+.+++++|.|.|.|+.  ++++..++..  ..-|.++   |+|.|.++|||++|+++++..++++.... +.
T Consensus       144 ~a~~a~~~gtRvvllRtGvVLs~~--GGaL~~m~~~fk~glGG~~---GsGrQ~~SWIhieD~v~~I~fll~~~~ls-Gp  217 (297)
T COG1090         144 EALQAQQLGTRVVLLRTGVVLSPD--GGALGKMLPLFKLGLGGKL---GSGRQWFSWIHIEDLVNAILFLLENEQLS-GP  217 (297)
T ss_pred             HHhhhhhcCceEEEEEEEEEecCC--CcchhhhcchhhhccCCcc---CCCCceeeeeeHHHHHHHHHHHHhCcCCC-Cc
Confidence            3332 3458999999999999984  2333333322  2233444   89999999999999999999999997744 49


Q ss_pred             EEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccc--cccCCCcccccccccccccchhhhhhcCCCcccccc
Q 023110          213 FNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKE--FDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQT  284 (287)
Q Consensus       213 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~  284 (287)
                      ||+++|.+++..++..++.+.+++|.  ..+.|...  +.+|..... ....+..+.  +|+.+ .||+++|+.
T Consensus       218 ~N~taP~PV~~~~F~~al~r~l~RP~--~~~vP~~~~rl~LGe~a~~-lL~gQrvlP--~kl~~-aGF~F~y~d  285 (297)
T COG1090         218 FNLTAPNPVRNKEFAHALGRALHRPA--ILPVPSFALRLLLGEMADL-LLGGQRVLP--KKLEA-AGFQFQYPD  285 (297)
T ss_pred             ccccCCCcCcHHHHHHHHHHHhCCCc--cccCcHHHHHHHhhhhHHH-HhccchhhH--HHHHH-CCCeeecCC
Confidence            99999999999999999999999875  34444432  335544443 333444444  47765 699999853

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.96  E-value=4.4e-28  Score=208.41  Aligned_cols=226  Identities=22%  Similarity=0.232  Sum_probs=174.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC--CccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--~~d~vi~   78 (287)
                      |||||+||++++++|+++|++|++++|+.........   .........+++++.+|+.|++++..+++..  ++|+|||
T Consensus        66 tGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~---~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~Vi~  142 (390)
T PLN02657         66 VGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNG---KEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVDVVVS  142 (390)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccch---hhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCcEEEE
Confidence            6999999999999999999999999998754211000   0000011257899999999999999999843  5999999


Q ss_pred             cCCCC-----------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhh--CC
Q 023110           79 INGRE-----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLES--KG  143 (287)
Q Consensus        79 ~a~~~-----------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~--~~  143 (287)
                      |++..           ..++.+++++++  ++++||++||.++++.             ...+..+|..+|..++.  .+
T Consensus       143 ~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p-------------~~~~~~sK~~~E~~l~~~~~g  209 (390)
T PLN02657        143 CLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKP-------------LLEFQRAKLKFEAELQALDSD  209 (390)
T ss_pred             CCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCc-------------chHHHHHHHHHHHHHHhccCC
Confidence            97642           234678899877  7899999999887531             01134789999988865  78


Q ss_pred             CcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCcee-eeeeHHHHHHHHHHHHcCCccCCceEEecCC-ccc
Q 023110          144 VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVT-QLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYV  221 (287)
Q Consensus       144 ~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~-~~~  221 (287)
                      ++++|+||+.+||+.      ..++..+..++++.++++++..+ ++||++|+|++++.++.++...+++||++++ +.+
T Consensus       210 l~~tIlRp~~~~~~~------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~  283 (390)
T PLN02657        210 FTYSIVRPTAFFKSL------GGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKAL  283 (390)
T ss_pred             CCEEEEccHHHhccc------HHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCccc
Confidence            999999999999852      22455666777777778877654 6799999999999999776656789999986 589


Q ss_pred             CHHHHHHHHHHHhCCCCCeEEeCCcccc
Q 023110          222 TFDGLARACAKAAGFPEPELVHYNPKEF  249 (287)
Q Consensus       222 s~~e~~~~i~~~~g~~~~~~~~~~~~~~  249 (287)
                      |+.|+++.+.+.+|++. .+...|...+
T Consensus       284 S~~Eia~~l~~~lG~~~-~~~~vp~~~~  310 (390)
T PLN02657        284 TPLEQGEMLFRILGKEP-KFFKVPIQIM  310 (390)
T ss_pred             CHHHHHHHHHHHhCCCC-ceEEcCHHHH
Confidence            99999999999999875 6666666543

>PLN02996 fatty acyl-CoA reductase

Probab=99.96  E-value=2.4e-27  Score=208.78  Aligned_cols=235  Identities=14%  Similarity=0.157  Sum_probs=168.5

Q ss_pred             CCcccchHHHHHHHHHHcC---CeEEEEEcCCcccc--ccCC-CCChhhh----h---------hhcCCeEEEEecCC--
Q 023110            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIA--QQLP-GESDQEF----A---------EFSSKILHLKGDRK--   59 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g---~~V~~~~r~~~~~~--~~~~-~~~~~~~----~---------~~~~~~~~i~~D~~--   59 (287)
                      ||||||+|++|++.|++.+   .+|+++.|......  +.+. ++.....    .         ....+++++.+|+.  
T Consensus        17 TGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~~~   96 (491)
T PLN02996         17 TGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYD   96 (491)
T ss_pred             eCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecccCCc
Confidence            8999999999999999864   37899999765311  1110 0000000    0         01257899999998  


Q ss_pred             -----ChHHHHhhhhcCCccEEEecCCC-------------CcccHHHHHHhCC---CCccEEEEecceeeccCCC----
Q 023110           60 -----DYDFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDL----  114 (287)
Q Consensus        60 -----d~~~~~~~~~~~~~d~vi~~a~~-------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~~~----  114 (287)
                           +.+.+..+++  ++|+|||+|+.             |+.++.+++++++   ++++|||+||..+||....    
T Consensus        97 ~LGLs~~~~~~~l~~--~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~~i~E  174 (491)
T PLN02996         97 DLGVKDSNLREEMWK--EIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILE  174 (491)
T ss_pred             CCCCChHHHHHHHHh--CCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCceeee
Confidence                 4455677787  89999999986             3456888998875   5789999999999986431    


Q ss_pred             CCCCCCC------------------------------------------------CCCCCcchhhhHHHHHHhhh--CCC
Q 023110          115 LPHCETD------------------------------------------------TVDPKSRHKGKLNTESVLES--KGV  144 (287)
Q Consensus       115 ~~~~e~~------------------------------------------------~~~~~~~~~~k~~~E~~~~~--~~~  144 (287)
                      .++.+..                                                ...|..|..+|+.+|.++.+  .++
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~~~l  254 (491)
T PLN02996        175 KPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKENL  254 (491)
T ss_pred             ecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhcCCC
Confidence            1111000                                                00233345999999999865  479


Q ss_pred             cEEEEecCeeecCCCCC--Ch------hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC---ccCCceE
Q 023110          145 NWTSLRPVYIYGPLNYN--PV------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE---KASRQVF  213 (287)
Q Consensus       145 ~~~ilR~~~v~g~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~~~  213 (287)
                      +++|+||++||||+...  .+      ...++..+..|....+++++++.++++|++|++++++.++.+.   ...+.+|
T Consensus       255 pv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vY  334 (491)
T PLN02996        255 PLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIY  334 (491)
T ss_pred             CEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEE
Confidence            99999999999987432  11      1223444455665567789999999999999999999998752   1245799


Q ss_pred             EecCC--cccCHHHHHHHHHHHhCCC
Q 023110          214 NISGE--KYVTFDGLARACAKAAGFP  237 (287)
Q Consensus       214 ~i~~~--~~~s~~e~~~~i~~~~g~~  237 (287)
                      |++++  .++|+.++++.+.+.++..
T Consensus       335 Ni~s~~~~~~s~~ei~~~~~~~~~~~  360 (491)
T PLN02996        335 HVGSSLKNPVKFSNLHDFAYRYFSKN  360 (491)
T ss_pred             EecCCCCCcccHHHHHHHHHHHhhhC
Confidence            99998  8899999999999988753

>PLN02583 cinnamoyl-CoA reductase

Probab=99.95  E-value=1.3e-26  Score=193.22  Aligned_cols=250  Identities=16%  Similarity=0.132  Sum_probs=171.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccc--ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++++++|+++||+|++++|+.....  ..+..     +.....+++++.+|+.|.+.+.+++.  ++|.|+|
T Consensus        12 TGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~-----l~~~~~~~~~~~~Dl~d~~~~~~~l~--~~d~v~~   84 (297)
T PLN02583         12 MDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRG-----LSCEEERLKVFDVDPLDYHSILDALK--GCSGLFC   84 (297)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHh-----cccCCCceEEEEecCCCHHHHHHHHc--CCCEEEE
Confidence            799999999999999999999999999643211  00110     00002368899999999999999998  8999999


Q ss_pred             cCCC--------------CcccHHHHHHhCC---CCccEEEEecceee--ccC---CCCCCCCCCCCCCC------cch-
Q 023110           79 INGR--------------EADEVEPILDALP---NLEQFIYCSSAGVY--LKS---DLLPHCETDTVDPK------SRH-  129 (287)
Q Consensus        79 ~a~~--------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~--~~~---~~~~~~e~~~~~~~------~~~-  129 (287)
                      +++.              ++.++.++++++.   ++++||++||...+  +..   ...+++|+++..+.      ..| 
T Consensus        85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  164 (297)
T PLN02583         85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA  164 (297)
T ss_pred             eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence            7643              2346788999875   46899999998764  311   22356666543222      134 


Q ss_pred             hhhHHHHHHh----hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcC
Q 023110          130 KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       130 ~~k~~~E~~~----~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (287)
                      .+|..+|+++    +..+++++++||++||||+.....      ..+.+.. ....+  ..+++||++|+|++++.++++
T Consensus       165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~------~~~~~~~-~~~~~--~~~~~v~V~Dva~a~~~al~~  235 (297)
T PLN02583        165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN------PYLKGAA-QMYEN--GVLVTVDVNFLVDAHIRAFED  235 (297)
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch------hhhcCCc-ccCcc--cCcceEEHHHHHHHHHHHhcC
Confidence            8999999987    346899999999999999743211      1222221 22222  346899999999999999997


Q ss_pred             CccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcc
Q 023110          206 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWK  280 (287)
Q Consensus       206 ~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p  280 (287)
                      +... +.|+++++....+.++++.+.+.++.-. ....+..  ..        .......+++ +|+++ |||+.
T Consensus       236 ~~~~-~r~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~--~~--------~~~~~~~~~~-~k~~~-l~~~~  296 (297)
T PLN02583        236 VSSY-GRYLCFNHIVNTEEDAVKLAQMLSPLIP-SPPPYEM--QG--------SEVYQQRIRN-KKLNK-LMEDF  296 (297)
T ss_pred             cccC-CcEEEecCCCccHHHHHHHHHHhCCCCC-CCCcccc--cC--------CCccccccCh-HHHHH-hCccc
Confidence            7644 4798888765667889999999876321 1111010  00        0113445788 89975 89975

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.1e-26  Score=213.92  Aligned_cols=228  Identities=21%  Similarity=0.247  Sum_probs=167.2

Q ss_pred             CCcccchHHHHHHHHH--HcCCeEEEEEcCCccccccCCCCChhhhhh-hcCCeEEEEecCCCh------HHHHhhhhcC
Q 023110            1 MGGTRFIGVFLSRLLV--KEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDY------DFVKSSLSAK   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~------~~~~~~~~~~   71 (287)
                      ||||||||++|+++|+  +.|++|++++|+.....  +..    .... ...+++++.+|+.|+      +.+..+ +  
T Consensus         6 TGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~--~~~----~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~--   76 (657)
T PRK07201          6 TGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSR--LEA----LAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G--   76 (657)
T ss_pred             eCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHH--HHH----HHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c--
Confidence            7999999999999999  47999999999654311  000    0000 025789999999884      445554 5  


Q ss_pred             CccEEEecCCC-------------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCC---CCCCc-chhhh
Q 023110           72 GFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT---VDPKS-RHKGK  132 (287)
Q Consensus        72 ~~d~vi~~a~~-------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~---~~~~~-~~~~k  132 (287)
                      ++|+|||+|+.             |+.++.+++++|.  ++++|||+||..+||.... +.+|+..   ..+.+ |..+|
T Consensus        77 ~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~~~~Y~~sK  155 (657)
T PRK07201         77 DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGLPTPYHRTK  155 (657)
T ss_pred             CCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchhhcCCCCchHHHH
Confidence            89999999975             3556888999987  6899999999999986543 3444432   22223 44999


Q ss_pred             HHHHHHhh-hCCCcEEEEecCeeecCCCCCC--------hhHHHHHHHHcC-CCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          133 LNTESVLE-SKGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       133 ~~~E~~~~-~~~~~~~ilR~~~v~g~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      +.+|.+++ ..+++++++||+.+|||.....        +...++...... ..++..+.+...++++|++|+++++..+
T Consensus       156 ~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~  235 (657)
T PRK07201        156 FEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHL  235 (657)
T ss_pred             HHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHH
Confidence            99999987 4689999999999999863221        111122222111 1233445556678999999999999999


Q ss_pred             HcCCccCCceEEecCCcccCHHHHHHHHHHHhCCCC
Q 023110          203 LGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       203 ~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  238 (287)
                      +..+...+++||+++++++|+.|+++.+.+.+|.+.
T Consensus       236 ~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~  271 (657)
T PRK07201        236 MHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPP  271 (657)
T ss_pred             hcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCc
Confidence            887655688999999999999999999999999764

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.94  E-value=3.7e-26  Score=189.63  Aligned_cols=212  Identities=20%  Similarity=0.248  Sum_probs=161.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc----CC-ccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KG-FDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~----~~-~d~   75 (287)
                      |||||++|++++++|+++|++|++++|+++...              ..+++.+.+|+.|++++..+++.    .+ +|.
T Consensus         5 tGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--------------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~   70 (285)
T TIGR03649         5 TGGTGKTASRIARLLQAASVPFLVASRSSSSSA--------------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISA   70 (285)
T ss_pred             EcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--------------CCCCccccccCCCHHHHHHHHhcccCcCCceeE
Confidence            799999999999999999999999999976521              13667788999999999999831    26 999


Q ss_pred             EEecCCCC---cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhC-CCcEEEE
Q 023110           76 VYDINGRE---ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESK-GVNWTSL  149 (287)
Q Consensus        76 vi~~a~~~---~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~-~~~~~il  149 (287)
                      |+|+++..   .....+++++++  +++|||++||..++..                 ...+...|.++++. +++++++
T Consensus        71 v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~-----------------~~~~~~~~~~l~~~~gi~~til  133 (285)
T TIGR03649        71 VYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKG-----------------GPAMGQVHAHLDSLGGVEYTVL  133 (285)
T ss_pred             EEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeeccccCCC-----------------CchHHHHHHHHHhccCCCEEEE
Confidence            99998743   245678888876  8999999998655211                 01234456777775 9999999


Q ss_pred             ecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccCHHHHHHH
Q 023110          150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA  229 (287)
Q Consensus       150 R~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~  229 (287)
                      ||+.+++.... .+   ....+.....+. .+.++..+++++++|+|+++..++.++...++.|++++++.+|+.|+++.
T Consensus       134 Rp~~f~~~~~~-~~---~~~~~~~~~~~~-~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~  208 (285)
T TIGR03649       134 RPTWFMENFSE-EF---HVEAIRKENKIY-SATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEI  208 (285)
T ss_pred             eccHHhhhhcc-cc---cccccccCCeEE-ecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHH
Confidence            99998865311 11   112222333333 34567789999999999999999988765678999999999999999999


Q ss_pred             HHHHhCCCCCeEEeCCcccc
Q 023110          230 CAKAAGFPEPELVHYNPKEF  249 (287)
Q Consensus       230 i~~~~g~~~~~~~~~~~~~~  249 (287)
                      +.+.+|++. ....++..++
T Consensus       209 l~~~~g~~v-~~~~~~~~~~  227 (285)
T TIGR03649       209 LSRVLGRKI-THVKLTEEEL  227 (285)
T ss_pred             HHHHhCCce-EEEeCCHHHH
Confidence            999999876 6666665543

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.94  E-value=9e-27  Score=187.19  Aligned_cols=215  Identities=19%  Similarity=0.293  Sum_probs=158.9

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCe----EEEEecCCChHHHHhhhhcCCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI----LHLKGDRKDYDFVKSSLSAKGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~D~~d~~~~~~~~~~~~~d~   75 (287)
                      |||+|.||+.|+++|++.+ .++++++|+.........++. ....  ..++    ..+.+|++|.+.+..+++..++|+
T Consensus         4 TGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~-~~~~--~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    4 TGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELR-SRFP--DPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             ETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCH-HHC----TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             EccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHh-hccc--ccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999986 589999999876321111000 0000  1234    346899999999999999999999


Q ss_pred             EEecCCC----------------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHH
Q 023110           76 VYDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        76 vi~~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E  136 (287)
                      |||+|+.                |+.++.++++++.  ++++||++||+..              .+|.+.+ .+|+.+|
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA--------------v~PtnvmGatKrlaE  146 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA--------------VNPTNVMGATKRLAE  146 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC--------------SS--SHHHHHHHHHH
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc--------------CCCCcHHHHHHHHHH
Confidence            9999997                4678999999977  9999999999775              4466665 9999999


Q ss_pred             HHhhh-------CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccC
Q 023110          137 SVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       137 ~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (287)
                      .++..       .+.+++++|+|+|+|.  ++.+++.|.+++.+|+++.+ .+++..+-|+.++++++.++.+..... .
T Consensus       147 ~l~~~~~~~~~~~~t~f~~VRFGNVlgS--~GSVip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~a~~~~~-~  222 (293)
T PF02719_consen  147 KLVQAANQYSGNSDTKFSSVRFGNVLGS--RGSVIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQAAALAK-G  222 (293)
T ss_dssp             HHHHHHCCTSSSS--EEEEEEE-EETTG--TTSCHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHHHHHH---T
T ss_pred             HHHHHHhhhCCCCCcEEEEEEecceecC--CCcHHHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHHHHhhCC-C
Confidence            98842       2468999999999997  46789999999999999987 577899999999999999999997766 6


Q ss_pred             CceEEecCCcccCHHHHHHHHHHHhCC
Q 023110          210 RQVFNISGEKYVTFDGLARACAKAAGF  236 (287)
Q Consensus       210 ~~~~~i~~~~~~s~~e~~~~i~~~~g~  236 (287)
                      |++|.+-.++++++.|+++.+.+..|.
T Consensus       223 geifvl~mg~~v~I~dlA~~~i~~~g~  249 (293)
T PF02719_consen  223 GEIFVLDMGEPVKILDLAEAMIELSGL  249 (293)
T ss_dssp             TEEEEE---TCEECCCHHHHHHHHTT-
T ss_pred             CcEEEecCCCCcCHHHHHHHHHhhccc
Confidence            889999999999999999999999985

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.94  E-value=1.8e-25  Score=192.03  Aligned_cols=232  Identities=19%  Similarity=0.216  Sum_probs=162.0

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCcccc--ccCCCCChhh-h--hhhc-CCeEEEEecCCCh------HHHHh
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIA--QQLPGESDQE-F--AEFS-SKILHLKGDRKDY------DFVKS   66 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~--~~~~~~~~~~-~--~~~~-~~~~~i~~D~~d~------~~~~~   66 (287)
                      ||||||+|++|+++|+++|  ++|++++|+.+...  +.+....... +  .... .+++++.+|+.++      +.+..
T Consensus         5 tGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~~~~~   84 (367)
T TIGR01746         5 TGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDAEWER   84 (367)
T ss_pred             eccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHHHHHH
Confidence            7999999999999999998  67999999876311  0110000000 0  0001 4789999998753      45666


Q ss_pred             hhhcCCccEEEecCCC-------------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCC-----CCC
Q 023110           67 SLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-----DPK  126 (287)
Q Consensus        67 ~~~~~~~d~vi~~a~~-------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-----~~~  126 (287)
                      +.+  ++|+|||+|+.             ++.++.++++++.  +.++|+++||..+|+.....+..|+...     .+.
T Consensus        85 ~~~--~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~  162 (367)
T TIGR01746        85 LAE--NVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLA  162 (367)
T ss_pred             HHh--hCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccccC
Confidence            666  89999999874             3456788888876  6778999999999976433323333321     112


Q ss_pred             -cchhhhHHHHHHhhh---CCCcEEEEecCeeecCCCCC-----ChhHHHHHHHHcCCCccCCCCCC-ceeeeeeHHHHH
Q 023110          127 -SRHKGKLNTESVLES---KGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGI-QVTQLGHVKDLA  196 (287)
Q Consensus       127 -~~~~~k~~~E~~~~~---~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~D~a  196 (287)
                       .|..+|+.+|.+++.   .+++++++|||.++|+...+     .+...++........+   .... ..++++|++|+|
T Consensus       163 ~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~~~~vddva  239 (367)
T TIGR01746       163 GGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAY---PDSPELTEDLTPVDYVA  239 (367)
T ss_pred             CChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCC---CCCCccccCcccHHHHH
Confidence             344999999998753   48999999999999973221     2233333333332222   2222 357899999999


Q ss_pred             HHHHHHHcCCcc--CCceEEecCCcccCHHHHHHHHHHHhCCCC
Q 023110          197 RAFVQVLGNEKA--SRQVFNISGEKYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       197 ~~~~~~~~~~~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  238 (287)
                      ++++.++.....  .+++||+++++++++.|+++.+.+ +|.+.
T Consensus       240 ~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~  282 (367)
T TIGR01746       240 RAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNL  282 (367)
T ss_pred             HHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCC
Confidence            999999876553  278999999999999999999999 88765

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.93  E-value=5.4e-25  Score=187.94  Aligned_cols=212  Identities=21%  Similarity=0.298  Sum_probs=180.8

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhh--hcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      |||+|.+|+.+++++++.+ -+++.++|++.+... ..    .++.+  ...++.++.||++|.+.+..+++..++|+|+
T Consensus       256 TGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~-i~----~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~Vf  330 (588)
T COG1086         256 TGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYL-ID----MELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVF  330 (588)
T ss_pred             eCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHH-HH----HHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceEE
Confidence            7999999999999999986 578889998876321 11    01111  0367889999999999999999977799999


Q ss_pred             ecCCC----------------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHH
Q 023110           78 DINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (287)
Q Consensus        78 ~~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~  138 (287)
                      |+|+.                |+.++.|++++|.  ++++||.+||+.+              .+|.+-+ .+|+.+|..
T Consensus       331 HAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKA--------------V~PtNvmGaTKr~aE~~  396 (588)
T COG1086         331 HAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA--------------VNPTNVMGATKRLAEKL  396 (588)
T ss_pred             EhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcc--------------cCCchHhhHHHHHHHHH
Confidence            99987                5778999999987  9999999999774              5566665 999999998


Q ss_pred             hhh-----C--CCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCc
Q 023110          139 LES-----K--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (287)
Q Consensus       139 ~~~-----~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (287)
                      +.+     .  +.+++++|+|+|.|.  ++++++-|.+.+.+|+++++ .+++..+-|+.+.|+++.++++..... .|+
T Consensus       397 ~~a~~~~~~~~~T~f~~VRFGNVlGS--rGSViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~LVlqA~a~~~-gGe  472 (588)
T COG1086         397 FQAANRNVSGTGTRFCVVRFGNVLGS--RGSVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQLVLQAGAIAK-GGE  472 (588)
T ss_pred             HHHHhhccCCCCcEEEEEEecceecC--CCCCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHHHHHHHHhhcC-CCc
Confidence            742     1  478999999999997  46788999999999999887 688999999999999999999998866 788


Q ss_pred             eEEecCCcccCHHHHHHHHHHHhC
Q 023110          212 VFNISGEKYVTFDGLARACAKAAG  235 (287)
Q Consensus       212 ~~~i~~~~~~s~~e~~~~i~~~~g  235 (287)
                      +|.+..|++++..|+++.+-+.+|
T Consensus       473 ifvldMGepvkI~dLAk~mi~l~g  496 (588)
T COG1086         473 IFVLDMGEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             EEEEcCCCCeEHHHHHHHHHHHhC
Confidence            999999999999999999999998

>PLN02778 3,5-epimerase/4-reductase

Probab=99.93  E-value=1.3e-24  Score=180.74  Aligned_cols=197  Identities=15%  Similarity=0.142  Sum_probs=148.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++|++.|+++|++|+...                             .|+.+.+.+...++..++|+|||+|
T Consensus        15 tG~tGfiG~~l~~~L~~~g~~V~~~~-----------------------------~~~~~~~~v~~~l~~~~~D~ViH~A   65 (298)
T PLN02778         15 YGKTGWIGGLLGKLCQEQGIDFHYGS-----------------------------GRLENRASLEADIDAVKPTHVFNAA   65 (298)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEec-----------------------------CccCCHHHHHHHHHhcCCCEEEECC
Confidence            79999999999999999999987532                             1233455566666656899999999


Q ss_pred             CCC-------------------cccHHHHHHhCC--CCccEEEEecceeeccCC------CCCCCCCCCCC-CCcch-hh
Q 023110           81 GRE-------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD------LLPHCETDTVD-PKSRH-KG  131 (287)
Q Consensus        81 ~~~-------------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~------~~~~~e~~~~~-~~~~~-~~  131 (287)
                      +..                   +.++.+++++|+  ++ +++++||..+|+...      ..+++|++.+. |.+.| .+
T Consensus        66 a~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~s  144 (298)
T PLN02778         66 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGL-VLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKT  144 (298)
T ss_pred             cccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHH
Confidence            853                   224778999987  55 567778888986432      22467666554 43556 99


Q ss_pred             hHHHHHHhhhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCc
Q 023110          132 KLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (287)
Q Consensus       132 k~~~E~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (287)
                      |+.+|.++..+. +..++|++..+|++..  ....++..+..++.+...+     .+++|++|++++++.++.++.  ++
T Consensus       145 K~~~E~~~~~y~-~~~~lr~~~~~~~~~~--~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~~--~g  214 (298)
T PLN02778        145 KAMVEELLKNYE-NVCTLRVRMPISSDLS--NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKRNL--TG  214 (298)
T ss_pred             HHHHHHHHHHhh-ccEEeeecccCCcccc--cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCCC--CC
Confidence            999999987653 6788999887876421  2234677777776654332     269999999999999997654  35


Q ss_pred             eEEecCCcccCHHHHHHHHHHHhCCC
Q 023110          212 VFNISGEKYVTFDGLARACAKAAGFP  237 (287)
Q Consensus       212 ~~~i~~~~~~s~~e~~~~i~~~~g~~  237 (287)
                      .||+++++.+|+.|+++.+++.+|..
T Consensus       215 ~yNigs~~~iS~~el~~~i~~~~~~~  240 (298)
T PLN02778        215 IYNFTNPGVVSHNEILEMYRDYIDPS  240 (298)
T ss_pred             eEEeCCCCcccHHHHHHHHHHHhCCC
Confidence            99999999999999999999999964

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.93  E-value=2.7e-25  Score=170.07  Aligned_cols=282  Identities=16%  Similarity=0.124  Sum_probs=204.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccc-ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||-||+-|+.|++.|+.+||+|.++.|..+... ..+..+...+..........+.+|++|...+.+++....++-|+|+
T Consensus        34 TGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPtEiYnL  113 (376)
T KOG1372|consen   34 TGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPTEVYNL  113 (376)
T ss_pred             ecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCchhhhhh
Confidence            689999999999999999999999999876532 2222222222222235688899999999999999998899999999


Q ss_pred             CCCC----------------cccHHHHHHhCC-----CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHH
Q 023110           80 NGRE----------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        80 a~~~----------------~~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (287)
                      |++.                ..++..++++++     ...||-..||...||.....|-.|.+|..|.++| .+|..+-.
T Consensus       114 aAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~W  193 (376)
T KOG1372|consen  114 AAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAKMYGYW  193 (376)
T ss_pred             hhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHHhhhhheE
Confidence            8873                345778888854     4568999999999999888899999999999998 77776543


Q ss_pred             Hh----hhCCCcEEEEecCeeecCCCCCChhHHHHHHHH-----cCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCcc
Q 023110          138 VL----ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK-----AGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       138 ~~----~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (287)
                      ++    +++++-.|.--+.+--+|+....|+..-+....     ..+.....|+-+..+||-|..|.+++++.+++++.+
T Consensus       194 ivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d~P  273 (376)
T KOG1372|consen  194 IVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQDSP  273 (376)
T ss_pred             EEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhcCCC
Confidence            33    345554443333333356544455544332222     223333457888899999999999999999998764


Q ss_pred             CCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCcc----------ccccCCCcccccccccccccchhhhhhcCCC
Q 023110          209 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPK----------EFDFGKKKAFPFRDQLRRQSMCSDGNLSLTW  278 (287)
Q Consensus       209 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  278 (287)
                        ..|.|..++..|.+|+++.-...+|... .+......          .....++.++|......+.|. +|+++.|||
T Consensus       274 --dDfViATge~hsVrEF~~~aF~~ig~~l-~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~LqGda-sKAk~~LgW  349 (376)
T KOG1372|consen  274 --DDFVIATGEQHSVREFCNLAFAEIGEVL-NWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQGDA-SKAKKTLGW  349 (376)
T ss_pred             --CceEEecCCcccHHHHHHHHHHhhCcEE-eecccccccccccCCceEEEEecccccCcchhhhhcCCh-HHHHHhhCC
Confidence              6899999999999999998888887432 21110000          112233445566667777888 999999999


Q ss_pred             cccccccc
Q 023110          279 WKVLQTHT  286 (287)
Q Consensus       279 ~p~~~~~~  286 (287)
                      +|+..++|
T Consensus       350 ~pkv~f~e  357 (376)
T KOG1372|consen  350 KPKVTFPE  357 (376)
T ss_pred             CCccCHHH
Confidence            99998875

>PRK12320 hypothetical protein; Provisional

Probab=99.93  E-value=1.2e-24  Score=195.27  Aligned_cols=219  Identities=12%  Similarity=0.099  Sum_probs=159.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++|++.|+++|++|++++|.....   .           ..+++++.+|+.++. +.+++.  ++|+|||++
T Consensus         6 TGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---~-----------~~~ve~v~~Dl~d~~-l~~al~--~~D~VIHLA   68 (699)
T PRK12320          6 TDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---L-----------DPRVDYVCASLRNPV-LQELAG--EADAVIHLA   68 (699)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---c-----------cCCceEEEccCCCHH-HHHHhc--CCCEEEEcC
Confidence            79999999999999999999999999875431   1           246889999999985 777787  899999999


Q ss_pred             CCC--------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCCCcEEEEe
Q 023110           81 GRE--------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLR  150 (287)
Q Consensus        81 ~~~--------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~ilR  150 (287)
                      +..        +.++.+++++|+  ++ ++||+||.  +|...         .    +    ..+|.++..++++++++|
T Consensus        69 a~~~~~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~~---------~----~----~~aE~ll~~~~~p~~ILR  128 (699)
T PRK12320         69 PVDTSAPGGVGITGLAHVANAAARAGA-RLLFVSQA--AGRPE---------L----Y----RQAETLVSTGWAPSLVIR  128 (699)
T ss_pred             ccCccchhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCCc---------c----c----cHHHHHHHhcCCCEEEEe
Confidence            853        356888999987  54 79999985  33210         0    1    147888877789999999


Q ss_pred             cCeeecCCCCC---ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccCHHHHH
Q 023110          151 PVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA  227 (287)
Q Consensus       151 ~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~  227 (287)
                      ++++|||+...   .++..++.....++          .+.++|++|++++++.+++.+.  +++||+++++.+|+.|++
T Consensus       129 ~~nVYGp~~~~~~~r~I~~~l~~~~~~~----------pI~vIyVdDvv~alv~al~~~~--~GiyNIG~~~~~Si~el~  196 (699)
T PRK12320        129 IAPPVGRQLDWMVCRTVATLLRSKVSAR----------PIRVLHLDDLVRFLVLALNTDR--NGVVDLATPDTTNVVTAW  196 (699)
T ss_pred             CceecCCCCcccHhHHHHHHHHHHHcCC----------ceEEEEHHHHHHHHHHHHhCCC--CCEEEEeCCCeeEHHHHH
Confidence            99999996432   23333333332222          3346999999999999997643  349999999999999999


Q ss_pred             HHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCccccccc
Q 023110          228 RACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTH  285 (287)
Q Consensus       228 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~  285 (287)
                      +.+.......  .+.  +..            ...+...+. +..+..++|.|+..++
T Consensus       197 ~~i~~~~p~~--~~~--~~~------------~~~~~~pdi-~~a~~~~~w~~~~~~~  237 (699)
T PRK12320        197 RLLRSVDPHL--RTR--RVR------------SWEQLIPEV-DIAAVQEDWNFEFGWQ  237 (699)
T ss_pred             HHHHHhCCCc--ccc--ccc------------cHHHhCCCC-chhhhhcCCCCcchHH
Confidence            9887762211  111  111            113334556 6777778999998775

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.92  E-value=1.6e-24  Score=169.19  Aligned_cols=215  Identities=23%  Similarity=0.303  Sum_probs=177.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|||||+|+.++++|.+.|.+|++..|..+.....++-+.+      ..++-+...|+.|+++++++++  ..++|||+.
T Consensus        67 FGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd------LGQvl~~~fd~~DedSIr~vvk--~sNVVINLI  138 (391)
T KOG2865|consen   67 FGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD------LGQVLFMKFDLRDEDSIRAVVK--HSNVVINLI  138 (391)
T ss_pred             ecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc------ccceeeeccCCCCHHHHHHHHH--hCcEEEEee
Confidence            59999999999999999999999999987764444432222      4688999999999999999999  899999998


Q ss_pred             CCC------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCCCcE
Q 023110           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNW  146 (287)
Q Consensus        81 ~~~------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~  146 (287)
                      |..            ..+.+.++..|+  ++.|||++|+.+.            ....+..+..+|...|..+++.--+.
T Consensus       139 Grd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga------------nv~s~Sr~LrsK~~gE~aVrdafPeA  206 (391)
T KOG2865|consen  139 GRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA------------NVKSPSRMLRSKAAGEEAVRDAFPEA  206 (391)
T ss_pred             ccccccCCcccccccchHHHHHHHHHHhhChhheeehhhccc------------cccChHHHHHhhhhhHHHHHhhCCcc
Confidence            873            456788888888  9999999998663            12233334499999999999887889


Q ss_pred             EEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCC-ceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccCHHH
Q 023110          147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI-QVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDG  225 (287)
Q Consensus       147 ~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e  225 (287)
                      +|+||+.+||..+  .+++++.....+=..+++++.+. ..-..+++-|+|++++.+++.+...|++|.+++++.+.+.|
T Consensus       207 tIirPa~iyG~eD--rfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~e  284 (391)
T KOG2865|consen  207 TIIRPADIYGTED--RFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLSE  284 (391)
T ss_pred             eeechhhhcccch--hHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCchhhHHH
Confidence            9999999999853  36666665555556677776653 46788999999999999999998899999999999999999


Q ss_pred             HHHHHHHHhCCC
Q 023110          226 LARACAKAAGFP  237 (287)
Q Consensus       226 ~~~~i~~~~g~~  237 (287)
                      +++.+-+....-
T Consensus       285 Lvd~my~~~~~~  296 (391)
T KOG2865|consen  285 LVDIMYDMAREW  296 (391)
T ss_pred             HHHHHHHHHhhc
Confidence            999998887653

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.91  E-value=4.1e-24  Score=165.82  Aligned_cols=175  Identities=31%  Similarity=0.471  Sum_probs=136.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||||++|+.++++|+++|++|++++|++++...             ..+++++.+|+.|++++.++++  ++|+||+++
T Consensus         4 ~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------------~~~~~~~~~d~~d~~~~~~al~--~~d~vi~~~   68 (183)
T PF13460_consen    4 FGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------------SPGVEIIQGDLFDPDSVKAALK--GADAVIHAA   68 (183)
T ss_dssp             ETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------------CTTEEEEESCTTCHHHHHHHHT--TSSEEEECC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------------ccccccceeeehhhhhhhhhhh--hcchhhhhh
Confidence            6999999999999999999999999999876432             2699999999999999999999  999999998


Q ss_pred             CCC---cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCCCcEEEEecCeee
Q 023110           81 GRE---ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIY  155 (287)
Q Consensus        81 ~~~---~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~ilR~~~v~  155 (287)
                      +..   ...+.+++++++  +++++|++|+.++|+..... ........+..++..|..+|+.+++.+++|+++||+.+|
T Consensus        69 ~~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~  147 (183)
T PF13460_consen   69 GPPPKDVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGL-FSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIY  147 (183)
T ss_dssp             HSTTTHHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSE-EEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEE
T ss_pred             hhhcccccccccccccccccccccceeeeccccCCCCCcc-cccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeE
Confidence            753   445778888886  88999999999998754432 111111222234588889999999899999999999999


Q ss_pred             cCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcC
Q 023110          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (287)
                      |+....             ..+.. ..+....++|+.+|+|++++.++++
T Consensus       148 ~~~~~~-------------~~~~~-~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  148 GNPSRS-------------YRLIK-EGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             BTTSSS-------------EEEES-STSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             eCCCcc-------------eeEEe-ccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            985321             11110 1334556999999999999998863

...

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.91  E-value=2.6e-23  Score=157.12  Aligned_cols=247  Identities=19%  Similarity=0.225  Sum_probs=185.5

Q ss_pred             CCcccchHHHHHHHHHHcCCe--EEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      ||++|.+|++|.+.+.+.|.+  =.++.-+                         -.+|+++.++.+++|++.++..|||
T Consensus         7 tGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-------------------------kd~DLt~~a~t~~lF~~ekPthVIh   61 (315)
T KOG1431|consen    7 TGGTGLVGSAIVKVVQEQGFDDENWVFIGS-------------------------KDADLTNLADTRALFESEKPTHVIH   61 (315)
T ss_pred             ecCCchHHHHHHHHHHhcCCCCcceEEecc-------------------------ccccccchHHHHHHHhccCCceeee
Confidence            799999999999999998752  1111111                         1368899999999999999999999


Q ss_pred             cCCC-----------------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCC----CCCCCcc-h-hhhH
Q 023110           79 INGR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKSR-H-KGKL  133 (287)
Q Consensus        79 ~a~~-----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~----~~~~~~~-~-~~k~  133 (287)
                      +|+-                 |...-.|++..+.  ++++++++.|.++|.+....|++|..    ++.|.++ | .+|+
T Consensus        62 lAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr  141 (315)
T KOG1431|consen   62 LAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKR  141 (315)
T ss_pred             hHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHH
Confidence            9764                 1222446777765  99999999999999998888898874    5667766 3 6776


Q ss_pred             HHHH----HhhhCCCcEEEEecCeeecCCC-----CCChhHHHHHHHH----cC-CCccCCCCCCceeeeeeHHHHHHHH
Q 023110          134 NTES----VLESKGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLK----AG-RPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       134 ~~E~----~~~~~~~~~~ilR~~~v~g~~~-----~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      ++.-    +-.++|..++.+-|.++|||.+     .+.+++.++++..    ++ .++.++|+|...+.|+|.+|+|+++
T Consensus       142 ~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~  221 (315)
T KOG1431|consen  142 MIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLF  221 (315)
T ss_pred             HHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHH
Confidence            5543    3356789999999999999974     3456777776554    23 3678899999999999999999999


Q ss_pred             HHHHcCCccCCceEEecCCc--ccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCC
Q 023110          200 VQVLGNEKASRQVFNISGEK--YVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLT  277 (287)
Q Consensus       200 ~~~~~~~~~~~~~~~i~~~~--~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg  277 (287)
                      +.++.+-. .-+-.+++.++  .+|++|+++++.++++-..........++           ...+-.+++ +|++. |+
T Consensus       222 i~vlr~Y~-~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~D-----------Gq~kKtasn-sKL~s-l~  287 (315)
T KOG1431|consen  222 IWVLREYE-GVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSD-----------GQFKKTASN-SKLRS-LL  287 (315)
T ss_pred             HHHHHhhc-CccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCC-----------CCcccccch-HHHHH-hC
Confidence            99998754 23456777766  79999999999999987762222222221           123445788 99996 89


Q ss_pred             Cccccc-ccc
Q 023110          278 WWKVLQ-THT  286 (287)
Q Consensus       278 ~~p~~~-~~~  286 (287)
                      |.|+++ +++
T Consensus       288 pd~~ft~l~~  297 (315)
T KOG1431|consen  288 PDFKFTPLEQ  297 (315)
T ss_pred             CCcccChHHH
Confidence            999996 553

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.90  E-value=1.6e-22  Score=164.70  Aligned_cols=207  Identities=17%  Similarity=0.130  Sum_probs=147.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC-hHHHHhhh-hcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSL-SAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d-~~~~~~~~-~~~~~d~vi~   78 (287)
                      |||||++|+.++++|+++|++|++++|+.+.....+..         ..+++++.+|+.| .+.+.+.+ .  ++|+||+
T Consensus        23 tGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~---------~~~~~~~~~Dl~d~~~~l~~~~~~--~~d~vi~   91 (251)
T PLN00141         23 AGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ---------DPSLQIVRADVTEGSDKLVEAIGD--DSDAVIC   91 (251)
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc---------CCceEEEEeeCCCCHHHHHHHhhc--CCCEEEE
Confidence            69999999999999999999999999987653222211         2368899999988 46676666 5  7999999


Q ss_pred             cCCCCc------------ccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCC-CCCCCcc-hhhhHHHHHHhhhC
Q 023110           79 INGREA------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD-TVDPKSR-HKGKLNTESVLESK  142 (287)
Q Consensus        79 ~a~~~~------------~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~-~~~~~~~-~~~k~~~E~~~~~~  142 (287)
                      +++...            .++.++++++.  ++++||++||..+|+.....+..+.. ...+... +..|..+|+++++.
T Consensus        92 ~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~  171 (251)
T PLN00141         92 ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKS  171 (251)
T ss_pred             CCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhc
Confidence            987631            24678888877  78899999999999754332221111 0111222 25788899989888


Q ss_pred             CCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecC---Cc
Q 023110          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG---EK  219 (287)
Q Consensus       143 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~---~~  219 (287)
                      +++++++||+.++++.....              +.+.........+++.+|+|+++..++..+...+.++.+.+   +.
T Consensus       172 gi~~~iirpg~~~~~~~~~~--------------~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (251)
T PLN00141        172 GINYTIVRPGGLTNDPPTGN--------------IVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAP  237 (251)
T ss_pred             CCcEEEEECCCccCCCCCce--------------EEECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCC
Confidence            99999999999998632111              11111111123579999999999999988776667787776   33


Q ss_pred             ccCHHHHHHHHHH
Q 023110          220 YVTFDGLARACAK  232 (287)
Q Consensus       220 ~~s~~e~~~~i~~  232 (287)
                      ..++.++...+++
T Consensus       238 ~~~~~~~~~~~~~  250 (251)
T PLN00141        238 KRSYKDLFASIKQ  250 (251)
T ss_pred             chhHHHHHHHhhc
Confidence            3788888887765

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.90  E-value=1.8e-23  Score=168.39  Aligned_cols=212  Identities=23%  Similarity=0.345  Sum_probs=156.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      +||||.+|+++++.|++.+++|++++|+.++. ...+.          ..+++++.+|+.|.+++.++++  ++|+||.+
T Consensus         4 ~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~----------~~g~~vv~~d~~~~~~l~~al~--g~d~v~~~   71 (233)
T PF05368_consen    4 TGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ----------ALGAEVVEADYDDPESLVAALK--GVDAVFSV   71 (233)
T ss_dssp             ETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH----------HTTTEEEES-TT-HHHHHHHHT--TCSEEEEE
T ss_pred             ECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh----------cccceEeecccCCHHHHHHHHc--CCceEEee
Confidence            69999999999999999999999999998542 11221          3578999999999999999999  99999998


Q ss_pred             CCCC----cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc-chhhhHHHHHHhhhCCCcEEEEecC
Q 023110           80 NGRE----ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPV  152 (287)
Q Consensus        80 a~~~----~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~~~~k~~~E~~~~~~~~~~~ilR~~  152 (287)
                      .+..    .....+++++++  ++++||+.|....+.        +.....|.. .+..|...|+++++.+++++++|+|
T Consensus        72 ~~~~~~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~--------~~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g  143 (233)
T PF05368_consen   72 TPPSHPSELEQQKNLIDAAKAAGVKHFVPSSFGADYD--------ESSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPG  143 (233)
T ss_dssp             SSCSCCCHHHHHHHHHHHHHHHT-SEEEESEESSGTT--------TTTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-
T ss_pred             cCcchhhhhhhhhhHHHhhhccccceEEEEEeccccc--------ccccccccchhhhhhhhhhhhhhhccccceecccc
Confidence            8754    446788999987  999999766444321        111222322 3488999999999999999999999


Q ss_pred             eeecCCCCCChhHHHHH--HHHcCC-CccCCCCCCceeeee-eHHHHHHHHHHHHcCCccC--CceEEecCCcccCHHHH
Q 023110          153 YIYGPLNYNPVEEWFFH--RLKAGR-PIPIPGSGIQVTQLG-HVKDLARAFVQVLGNEKAS--RQVFNISGEKYVTFDGL  226 (287)
Q Consensus       153 ~v~g~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~i-~~~D~a~~~~~~~~~~~~~--~~~~~i~~~~~~s~~e~  226 (287)
                      .++...     ...+..  ...... .+.++++++....++ +.+|+|++++.++.++...  ++.+.+++ +.+|+.|+
T Consensus       144 ~f~e~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t~~ei  217 (233)
T PF05368_consen  144 FFMENL-----LPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLTYNEI  217 (233)
T ss_dssp             EEHHHH-----HTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEEHHHH
T ss_pred             chhhhh-----hhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCCHHHH
Confidence            876541     111111  011111 345566777666675 9999999999999886543  56777766 77999999


Q ss_pred             HHHHHHHhCCCC
Q 023110          227 ARACAKAAGFPE  238 (287)
Q Consensus       227 ~~~i~~~~g~~~  238 (287)
                      ++.+.+.+|++.
T Consensus       218 a~~~s~~~G~~v  229 (233)
T PF05368_consen  218 AAILSKVLGKKV  229 (233)
T ss_dssp             HHHHHHHHTSEE
T ss_pred             HHHHHHHHCCcc
Confidence            999999999854

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.90  E-value=4.6e-23  Score=167.44  Aligned_cols=196  Identities=21%  Similarity=0.214  Sum_probs=113.2

Q ss_pred             CCcccchHHHHHHHHHHcCC--eEEEEEcCCccc--c----ccCCCCChhhh--hhhcCCeEEEEecCCCh------HHH
Q 023110            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPI--A----QQLPGESDQEF--AEFSSKILHLKGDRKDY------DFV   64 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~--~V~~~~r~~~~~--~----~~~~~~~~~~~--~~~~~~~~~i~~D~~d~------~~~   64 (287)
                      ||||||+|++|+++|++++.  +|+++.|..+..  .    +.+........  ....++++++.||+.++      +.+
T Consensus         2 TGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~~   81 (249)
T PF07993_consen    2 TGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDEDY   81 (249)
T ss_dssp             E-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHHH
T ss_pred             cCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHHh
Confidence            79999999999999999976  999999987541  1    12222111111  12367999999999874      456


Q ss_pred             HhhhhcCCccEEEecCCC-------------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCC-------C--
Q 023110           65 KSSLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE-------T--  120 (287)
Q Consensus        65 ~~~~~~~~~d~vi~~a~~-------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e-------~--  120 (287)
                      ..+.+  ++|+|||+|+.             |+.++.++++.|.  +.++|+|+||..+.+..... ..|       .  
T Consensus        82 ~~L~~--~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~-~~~~~~~~~~~~~  158 (249)
T PF07993_consen   82 QELAE--EVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGT-IEEKVYPEEEDDL  158 (249)
T ss_dssp             HHHHH--H--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT---SSS-HHH--EE
T ss_pred             hcccc--ccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCc-ccccccccccccc
Confidence            67767  89999999887             4678999999987  55699999995555443321 111       1  


Q ss_pred             -CCCC-CCcchhhhHHHHHHhhh----CCCcEEEEecCeeecCC-----CCCChhHHHHHHH-HcCCCccCCCCCCceee
Q 023110          121 -DTVD-PKSRHKGKLNTESVLES----KGVNWTSLRPVYIYGPL-----NYNPVEEWFFHRL-KAGRPIPIPGSGIQVTQ  188 (287)
Q Consensus       121 -~~~~-~~~~~~~k~~~E~~~~~----~~~~~~ilR~~~v~g~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  188 (287)
                       .... +.+|..+|+.+|+++++    .+++++|+|||.|+|..     ....+...++... ..+......++.....+
T Consensus       159 ~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d  238 (249)
T PF07993_consen  159 DPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLD  238 (249)
T ss_dssp             E--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--
T ss_pred             hhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEe
Confidence             1112 22344999999999853    38999999999999932     1233233334333 33433334455566799


Q ss_pred             eeeHHHHHHHH
Q 023110          189 LGHVKDLARAF  199 (287)
Q Consensus       189 ~i~~~D~a~~~  199 (287)
                      ++++|.+|+++
T Consensus       239 ~vPVD~va~aI  249 (249)
T PF07993_consen  239 LVPVDYVARAI  249 (249)
T ss_dssp             EEEHHHHHHHH
T ss_pred             EECHHHHHhhC
Confidence            99999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.89  E-value=2.2e-22  Score=178.84  Aligned_cols=231  Identities=17%  Similarity=0.151  Sum_probs=158.6

Q ss_pred             CCcccchHHHHHHHHHHcCC---eEEEEEcCCccc--cccCC-CCCh----hhhhh---------hcCCeEEEEecCCCh
Q 023110            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPI--AQQLP-GESD----QEFAE---------FSSKILHLKGDRKDY   61 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~---~V~~~~r~~~~~--~~~~~-~~~~----~~~~~---------~~~~~~~i~~D~~d~   61 (287)
                      ||||||+|++|++.|++.+.   +|+++.|.....  .+.+. ++.+    ..+.+         ...++..+.+|+.++
T Consensus       125 TGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d~  204 (605)
T PLN02503        125 TGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCES  204 (605)
T ss_pred             cCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEeeCCCc
Confidence            89999999999999998753   789999976542  11111 1000    01100         135789999999986


Q ss_pred             ------HHHHhhhhcCCccEEEecCCC-------------CcccHHHHHHhCC---CCccEEEEecceeeccCCCCCCCC
Q 023110           62 ------DFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCE  119 (287)
Q Consensus        62 ------~~~~~~~~~~~~d~vi~~a~~-------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e  119 (287)
                            +..+.+.+  ++|+|||+|+.             |+.++.+++++++   +.++|||+||..|||...+ .+.|
T Consensus       205 ~LGLs~~~~~~L~~--~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G-~i~E  281 (605)
T PLN02503        205 NLGLEPDLADEIAK--EVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQG-RIME  281 (605)
T ss_pred             ccCCCHHHHHHHHh--cCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCC-eeee
Confidence                  45556666  79999999986             2456888999875   4678999999999986531 1111


Q ss_pred             CCC------------------------------------------------------------CCCCcchhhhHHHHHHh
Q 023110          120 TDT------------------------------------------------------------VDPKSRHKGKLNTESVL  139 (287)
Q Consensus       120 ~~~------------------------------------------------------------~~~~~~~~~k~~~E~~~  139 (287)
                      ...                                                            .-|..|..+|..+|.++
T Consensus       282 ~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV  361 (605)
T PLN02503        282 KPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVI  361 (605)
T ss_pred             eecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHH
Confidence            111                                                            11233448999999999


Q ss_pred             hh--CCCcEEEEecCeeec----------CCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcC-C
Q 023110          140 ES--KGVNWTSLRPVYIYG----------PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-E  206 (287)
Q Consensus       140 ~~--~~~~~~ilR~~~v~g----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~-~  206 (287)
                      .+  .+++++|+||+.|.+          ++.. ...+.+ -....|.--.++++++...|+|++|.++++++.+... .
T Consensus       362 ~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~-~~~p~~-~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~  439 (605)
T PLN02503        362 NSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNR-MMDPIV-LYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHG  439 (605)
T ss_pred             HHhcCCCCEEEEcCCEecccccCCccccccCcc-ccchhh-hheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhh
Confidence            64  379999999999943          3211 111111 1222333223567889999999999999999998432 1


Q ss_pred             ---ccCCceEEecCC--cccCHHHHHHHHHHHhCC
Q 023110          207 ---KASRQVFNISGE--KYVTFDGLARACAKAAGF  236 (287)
Q Consensus       207 ---~~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~  236 (287)
                         ...+.+||++++  .++++.++.+.+.+.+..
T Consensus       440 ~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        440 GAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             cccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence               124679999988  889999999999987754

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.88  E-value=4e-21  Score=176.90  Aligned_cols=231  Identities=16%  Similarity=0.135  Sum_probs=161.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++|++.|.++|++|...                             .+|+.|.+.+...++..++|+|||+|
T Consensus       386 tGa~G~iG~~l~~~L~~~g~~v~~~-----------------------------~~~l~d~~~v~~~i~~~~pd~Vih~A  436 (668)
T PLN02260        386 YGRTGWIGGLLGKLCEKQGIAYEYG-----------------------------KGRLEDRSSLLADIRNVKPTHVFNAA  436 (668)
T ss_pred             ECCCchHHHHHHHHHHhCCCeEEee-----------------------------ccccccHHHHHHHHHhhCCCEEEECC
Confidence            7999999999999999999987310                             13467788888888877899999999


Q ss_pred             CCC-------------------cccHHHHHHhCC--CCccEEEEecceeeccC------CCCCCCCCCCCCC-Ccch-hh
Q 023110           81 GRE-------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS------DLLPHCETDTVDP-KSRH-KG  131 (287)
Q Consensus        81 ~~~-------------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~------~~~~~~e~~~~~~-~~~~-~~  131 (287)
                      +..                   +.++.+++++|+  ++ ++|++||..+|+..      ...|++|++.+.| .+.| .+
T Consensus       437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~s  515 (668)
T PLN02260        437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKT  515 (668)
T ss_pred             cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHH
Confidence            753                   234778999987  55 57888999998642      1346888766654 3555 99


Q ss_pred             hHHHHHHhhhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCC-ccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCC
Q 023110          132 KLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (287)
Q Consensus       132 k~~~E~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (287)
                      |+.+|.+++.+ .+..++|+..+||.+...  ...++..+.+... +.++      .+..+++|++.+++.+++..  .+
T Consensus       516 K~~~E~~~~~~-~~~~~~r~~~~~~~~~~~--~~nfv~~~~~~~~~~~vp------~~~~~~~~~~~~~~~l~~~~--~~  584 (668)
T PLN02260        516 KAMVEELLREY-DNVCTLRVRMPISSDLSN--PRNFITKISRYNKVVNIP------NSMTVLDELLPISIEMAKRN--LR  584 (668)
T ss_pred             HHHHHHHHHhh-hhheEEEEEEecccCCCC--ccHHHHHHhccceeeccC------CCceehhhHHHHHHHHHHhC--CC
Confidence            99999999776 478889999999753211  1123444444333 3231      24677888998888888643  25


Q ss_pred             ceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCC
Q 023110          211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTW  278 (287)
Q Consensus       211 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  278 (287)
                      ++||++++..+|+.|+++.+.+.++... .+.++...++.   ......++.. .+|+ +|+++.+|.
T Consensus       585 giyni~~~~~~s~~e~a~~i~~~~~~~~-~~~~~~~~~~~---~~~~a~rp~~-~l~~-~k~~~~~~~  646 (668)
T PLN02260        585 GIWNFTNPGVVSHNEILEMYKDYIDPGF-KWSNFTLEEQA---KVIVAPRSNN-EMDA-SKLKKEFPE  646 (668)
T ss_pred             ceEEecCCCcCcHHHHHHHHHHhcCCcc-cccccCHHHhh---hHhhCCCccc-cccH-HHHHHhCcc
Confidence            7999999999999999999999875211 13333333321   0011123344 6899 999988887

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.85  E-value=1e-19  Score=149.07  Aligned_cols=227  Identities=14%  Similarity=0.098  Sum_probs=149.7

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCcccc--ccCC---CCChhhhhhhcCCeEEEEecCCC------hHHHHhhh
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIA--QQLP---GESDQEFAEFSSKILHLKGDRKD------YDFVKSSL   68 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~--~~~~---~~~~~~~~~~~~~~~~i~~D~~d------~~~~~~~~   68 (287)
                      ||||||+|++|++.|+.+- .+|++++|..+...  +.+.   .......+...++++.+.+|+..      ...++.+.
T Consensus         6 TGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~La   85 (382)
T COG3320           6 TGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELA   85 (382)
T ss_pred             ecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHHHHHh
Confidence            8999999999999999874 59999999887311  1111   11112222335789999999973      56788888


Q ss_pred             hcCCccEEEecCCC-------------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCC----CC------C
Q 023110           69 SAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCET----DT------V  123 (287)
Q Consensus        69 ~~~~~d~vi~~a~~-------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~----~~------~  123 (287)
                      +  .+|.|||+++.             |+.++..+++.+.  +.|.|+|+||++|+........+++    .+      .
T Consensus        86 ~--~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~  163 (382)
T COG3320          86 E--NVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQG  163 (382)
T ss_pred             h--hcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccccCc
Confidence            7  89999999875             6788999999977  6788999999999865332211111    11      1


Q ss_pred             CCCcchhhhHHHHHHhh---hCCCcEEEEecCeeecCCC-----CCChhHHHHHHHHcCCCccCCCCCCceeeeee----
Q 023110          124 DPKSRHKGKLNTESVLE---SKGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH----  191 (287)
Q Consensus       124 ~~~~~~~~k~~~E~~~~---~~~~~~~ilR~~~v~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~----  191 (287)
                      .+.+|.+||+.+|.+++   +.|++++|+|||.|.|+..     ...++..++.....-..++-   .....+.+.    
T Consensus       164 ~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~---~~~~~~~~p~~~v  240 (382)
T COG3320         164 LAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPD---SEYSLDMLPVDHV  240 (382)
T ss_pred             cCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCC---cccchhhCcccee
Confidence            22345599999999986   3589999999999999753     23455555555554443332   122222332    


Q ss_pred             -------HHHHHHHHHHHHcCCccCCceEE-ecCCcccCHHHHHHHHHH
Q 023110          192 -------VKDLARAFVQVLGNEKASRQVFN-ISGEKYVTFDGLARACAK  232 (287)
Q Consensus       192 -------~~D~a~~~~~~~~~~~~~~~~~~-i~~~~~~s~~e~~~~i~~  232 (287)
                             +.-+++++..+..++...-..|+ ..-++.+...++.+.+.+
T Consensus       241 ~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         241 ARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             eEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence                   33344444444444432223444 233677999999998888

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.85  E-value=9.1e-20  Score=180.78  Aligned_cols=232  Identities=18%  Similarity=0.191  Sum_probs=160.0

Q ss_pred             CCcccchHHHHHHHHHHcC----CeEEEEEcCCccccc--cCCCCCh---hhhhhhcCCeEEEEecCCC------hHHHH
Q 023110            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQ--QLPGESD---QEFAEFSSKILHLKGDRKD------YDFVK   65 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g----~~V~~~~r~~~~~~~--~~~~~~~---~~~~~~~~~~~~i~~D~~d------~~~~~   65 (287)
                      ||||||+|++++++|++++    ++|+++.|+......  .+.....   ........+++++.+|+.+      .+.+.
T Consensus       977 TGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~~ 1056 (1389)
T TIGR03443       977 TGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKWS 1056 (1389)
T ss_pred             eCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHHHH
Confidence            7999999999999999887    899999997643211  1100000   0000112478999999964      45566


Q ss_pred             hhhhcCCccEEEecCCC-------------CcccHHHHHHhCC--CCccEEEEecceeeccCC------------CCCCC
Q 023110           66 SSLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSD------------LLPHC  118 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~-------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~------------~~~~~  118 (287)
                      .+..  ++|+|||+|+.             |+.++.++++++.  +.++|+|+||.++|+...            ...+.
T Consensus      1057 ~l~~--~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~ 1134 (1389)
T TIGR03443      1057 DLTN--EVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIP 1134 (1389)
T ss_pred             HHHh--cCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccCCCCC
Confidence            6666  89999999875             3556888999877  778999999999996421            11233


Q ss_pred             CCCCC-----CC-CcchhhhHHHHHHhh---hCCCcEEEEecCeeecCCCCC-----ChhHHHHHHHHcCCCccCCCCCC
Q 023110          119 ETDTV-----DP-KSRHKGKLNTESVLE---SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGI  184 (287)
Q Consensus       119 e~~~~-----~~-~~~~~~k~~~E~~~~---~~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  184 (287)
                      |....     .+ .+|..+|+.+|.++.   ..+++++++|||.|||+...+     .++..++.....   .....+..
T Consensus      1135 e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~---~~~~p~~~ 1211 (1389)
T TIGR03443      1135 ESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQ---LGLIPNIN 1211 (1389)
T ss_pred             cccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHH---hCCcCCCC
Confidence            33221     12 234599999999884   358999999999999986432     122223322222   22223445


Q ss_pred             ceeeeeeHHHHHHHHHHHHcCCc--cCCceEEecCCcccCHHHHHHHHHHHhCCCC
Q 023110          185 QVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       185 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  238 (287)
                      ..+++++++|+|++++.++.++.  ..+.+||++++..+++.++++.+.+. |.+.
T Consensus      1212 ~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~ 1266 (1389)
T TIGR03443      1212 NTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDV 1266 (1389)
T ss_pred             CccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCC
Confidence            67899999999999999987653  23458999999889999999999764 5544

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.83  E-value=8.9e-20  Score=159.60  Aligned_cols=214  Identities=16%  Similarity=0.139  Sum_probs=142.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhh----hhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA----EFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      |||+|+||++++++|+++|++|++++|+..........+....+.    ....+++++.+|+.|.+++.+++.  ++|+|
T Consensus        86 TGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg--giDiV  163 (576)
T PLN03209         86 AGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG--NASVV  163 (576)
T ss_pred             ECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc--CCCEE
Confidence            699999999999999999999999999876532111100000000    001358899999999999999998  89999


Q ss_pred             EecCCCC--------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCC-cchhhhHHHHHHh
Q 023110           77 YDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRHKGKLNTESVL  139 (287)
Q Consensus        77 i~~a~~~--------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~-~~~~~k~~~E~~~  139 (287)
                      ||++|..              ..++.++++++.  +++|||++||.+++...    .... ..... .+...|..+|..+
T Consensus       164 Vn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g----~p~~-~~~sk~~~~~~KraaE~~L  238 (576)
T PLN03209        164 ICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG----FPAA-ILNLFWGVLCWKRKAEEAL  238 (576)
T ss_pred             EEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC----cccc-chhhHHHHHHHHHHHHHHH
Confidence            9998763              235778888876  78999999998763111    0011 11111 2337788999999


Q ss_pred             hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCc-cCCceEEecCC
Q 023110          140 ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGE  218 (287)
Q Consensus       140 ~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~i~~~  218 (287)
                      ...|++|++||||.++++.+....          ...+............+..+|+|++++.++.++. ..+++|.+.++
T Consensus       239 ~~sGIrvTIVRPG~L~tp~d~~~~----------t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~  308 (576)
T PLN03209        239 IASGLPYTIVRPGGMERPTDAYKE----------THNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAE  308 (576)
T ss_pred             HHcCCCEEEEECCeecCCcccccc----------ccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeC
Confidence            999999999999999887432100          0001110010111234788999999999998654 46789999887


Q ss_pred             cccCHHHHHHHHH
Q 023110          219 KYVTFDGLARACA  231 (287)
Q Consensus       219 ~~~s~~e~~~~i~  231 (287)
                      .......+.+++.
T Consensus       309 ~~~p~~~~~~~~~  321 (576)
T PLN03209        309 TTAPLTPMEELLA  321 (576)
T ss_pred             CCCCCCCHHHHHH
Confidence            6433344444443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.78  E-value=9.3e-18  Score=138.68  Aligned_cols=206  Identities=17%  Similarity=0.184  Sum_probs=140.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+...... +.       .....++.++.+|+.|.+++.+++++     .++|+
T Consensus         8 tGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~-~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          8 TGASSGFGRGMTERLLARGDRVAATVRRPDALDD-LK-------ARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH-------HhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211 11       01124688999999999988877653     25899


Q ss_pred             EEecCCCC--------------------cccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||++|..                    +.++.++++++    +  +..++|++||......           ..+.+.|
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y  148 (276)
T PRK06482         80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA-----------YPGFSLY  148 (276)
T ss_pred             EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC-----------CCCCchh
Confidence            99999863                    22344555554    3  5679999999654211           1122344


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCee---ecCCCCC--------ChhHHHHHHHHcCCCccCCCCCCceeeee
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYI---YGPLNYN--------PVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v---~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                       .+|..+|.+++       ..+++++++|||.+   ||++...        ......+........+.+         +.
T Consensus       149 ~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  219 (276)
T PRK06482        149 HATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAI---------PG  219 (276)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCC---------CC
Confidence             89998887653       25899999999988   5543211        001111222222222211         24


Q ss_pred             eHHHHHHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHHHHhC
Q 023110          191 HVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG  235 (287)
Q Consensus       191 ~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g  235 (287)
                      +++|++++++.++..+. .+..||++++...+..++++.+.+.++
T Consensus       220 d~~~~~~a~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        220 DPQKMVQAMIASADQTP-APRRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             CHHHHHHHHHHHHcCCC-CCeEEecChHHHHHHHHHHHHHHHHHH
Confidence            68999999999997654 356799999988888888887777664

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.78  E-value=3e-18  Score=130.76  Aligned_cols=261  Identities=15%  Similarity=0.044  Sum_probs=186.5

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||+-|.+|..+++.|..+ |.+-++++--.......+            ..-.+|..|+.|...+++++-..++|.+||+
T Consensus        50 TG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~------------~~GPyIy~DILD~K~L~eIVVn~RIdWL~Hf  117 (366)
T KOG2774|consen   50 TGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT------------DVGPYIYLDILDQKSLEEIVVNKRIDWLVHF  117 (366)
T ss_pred             ecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc------------ccCCchhhhhhccccHHHhhcccccceeeeH
Confidence            799999999999999987 766555543222211112            3456788999999999999988899999998


Q ss_pred             CCC---------------CcccHHHHHHhCC-CCccEEEEecceeeccCC-CCCCCCCCCCCCCcch-hhhHHHHHHh--
Q 023110           80 NGR---------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSD-LLPHCETDTVDPKSRH-KGKLNTESVL--  139 (287)
Q Consensus        80 a~~---------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~-~~~~~e~~~~~~~~~~-~~k~~~E~~~--  139 (287)
                      ++.               |+.+..|+++.++ ..-++...|+++.||+.. ..|..+-+...|...| .+|..+|-+-  
T Consensus       118 SALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy  197 (366)
T KOG2774|consen  118 SALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEY  197 (366)
T ss_pred             HHHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHH
Confidence            432               5778999999987 566888899999999753 4455555666777666 9999988654  


Q ss_pred             --hhCCCcEEEEecCeeecC---C-CCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCcc--CCc
Q 023110          140 --ESKGVNWTSLRPVYIYGP---L-NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA--SRQ  211 (287)
Q Consensus       140 --~~~~~~~~ilR~~~v~g~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~  211 (287)
                        ...++++-.+|.+.++..   + .........+..++.+.+...+..++....+++.+|+-++++.++..+..  ..+
T Consensus       198 ~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr  277 (366)
T KOG2774|consen  198 FNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRR  277 (366)
T ss_pred             HHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhhh
Confidence              356899999999998864   2 22233344445555444555566788899999999999999999876542  457


Q ss_pred             eEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccc
Q 023110          212 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQT  284 (287)
Q Consensus       212 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~  284 (287)
                      +||+.+ ...|.+|+++.+.+++..-  .+.+-+...-.       ........+|. +.+|.+..|+-++.+
T Consensus       278 ~ynvt~-~sftpee~~~~~~~~~p~~--~i~y~~~srq~-------iad~wp~~~dd-s~ar~~wh~~h~~~l  339 (366)
T KOG2774|consen  278 TYNVTG-FSFTPEEIADAIRRVMPGF--EIDYDICTRQS-------IADSWPMSLDD-SEARTEWHEKHSLHL  339 (366)
T ss_pred             eeeece-eccCHHHHHHHHHhhCCCc--eeecccchhhh-------hhhhcccccCc-hhHhhHHHHhhhhhH
Confidence            999988 7799999999999998532  44432221100       01123334677 788888888776654

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.78  E-value=4.1e-17  Score=134.67  Aligned_cols=209  Identities=24%  Similarity=0.291  Sum_probs=159.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||++|++++++|+++|++|++++|++.......            .++++..+|+.++..+...++  +.|.++++.
T Consensus         6 ~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------------~~v~~~~~d~~~~~~l~~a~~--G~~~~~~i~   71 (275)
T COG0702           6 TGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------------GGVEVVLGDLRDPKSLVAGAK--GVDGVLLIS   71 (275)
T ss_pred             EecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------------CCcEEEEeccCCHhHHHHHhc--cccEEEEEe
Confidence            699999999999999999999999999987732111            488999999999999999999  999999887


Q ss_pred             CCCc-------cc---HHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCCCcEEEE
Q 023110           81 GREA-------DE---VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL  149 (287)
Q Consensus        81 ~~~~-------~~---~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~il  149 (287)
                      +...       ..   ..+..+++. +.++++++|....            +...+..+..+|..+|..+.+.+++++++
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~------------~~~~~~~~~~~~~~~e~~l~~sg~~~t~l  139 (275)
T COG0702          72 GLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGA------------DAASPSALARAKAAVEAALRSSGIPYTTL  139 (275)
T ss_pred             cccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCC------------CCCCccHHHHHHHHHHHHHHhcCCCeEEE
Confidence            7321       12   233344444 5788888887654            12334445699999999999999999999


Q ss_pred             ecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccCHHHHHHH
Q 023110          150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA  229 (287)
Q Consensus       150 R~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~  229 (287)
                      |+..+|...... +   .......+.++...+.  .....+..+|++.++...+..+...+++|.+++++..+..++.+.
T Consensus       140 r~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~--~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~  213 (275)
T COG0702         140 RRAAFYLGAGAA-F---IEAAEAAGLPVIPRGI--GRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASG  213 (275)
T ss_pred             ecCeeeeccchh-H---HHHHHhhCCceecCCC--CceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHH
Confidence            977776553211 0   1122223333333233  378999999999999999988877889999999999999999999


Q ss_pred             HHHHhCCCCCeEE
Q 023110          230 CAKAAGFPEPELV  242 (287)
Q Consensus       230 i~~~~g~~~~~~~  242 (287)
                      +.+..|++. ...
T Consensus       214 l~~~~gr~~-~~~  225 (275)
T COG0702         214 LDYTIGRPV-GLI  225 (275)
T ss_pred             HHHHhCCcc-eee
Confidence            999999876 443

>PRK09135 pteridine reductase; Provisional

Probab=99.78  E-value=1e-17  Score=136.25  Aligned_cols=198  Identities=20%  Similarity=0.201  Sum_probs=129.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh-hcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|++|++++++|+++|++|++++|+.....+.+.    ..+.. ....+.++.+|+.|.+++..+++..     ++|
T Consensus        12 tGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   87 (249)
T PRK09135         12 TGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALA----AELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLD   87 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999987543211111    00000 0235888999999999988887742     589


Q ss_pred             EEEecCCCC--------------------cccHHHHHHhCC-----CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           75 VVYDINGRE--------------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        75 ~vi~~a~~~--------------------~~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +|||+++..                    ..++.++++++.     ....++.+|+..           +..+..+...|
T Consensus        88 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~Y  156 (249)
T PRK09135         88 ALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH-----------AERPLKGYPVY  156 (249)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh-----------hcCCCCCchhH
Confidence            999999852                    233555666653     223455554422           22334444455


Q ss_pred             -hhhHHHHHHhhh------CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 -KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 -~~k~~~E~~~~~------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                       .+|..+|.+++.      .+++++++||+.++||.....+..........+.++..         +.+++|+|+++..+
T Consensus       157 ~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~d~a~~~~~~  227 (249)
T PRK09135        157 CAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKR---------IGTPEDIAEAVRFL  227 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCC---------CcCHHHHHHHHHHH
Confidence             999999987742      26899999999999997533333223333333322211         12479999999766


Q ss_pred             HcC-CccCCceEEecCCcccC
Q 023110          203 LGN-EKASRQVFNISGEKYVT  222 (287)
Q Consensus       203 ~~~-~~~~~~~~~i~~~~~~s  222 (287)
                      +.. +..+|++|+++++..++
T Consensus       228 ~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        228 LADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             cCccccccCcEEEECCCeecc
Confidence            643 33478899999987654

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.76  E-value=6.6e-18  Score=128.06  Aligned_cols=247  Identities=17%  Similarity=0.100  Sum_probs=165.1

Q ss_pred             CcccchHHHHHH-----HHHHcC----CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCC
Q 023110            2 GGTRFIGVFLSR-----LLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG   72 (287)
Q Consensus         2 GatG~iG~~l~~-----~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~   72 (287)
                      +++|+++..|..     ++-+.+    |+|++++|.+....                 +.+-..|.....      -  .
T Consensus        19 ~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~r-----------------itw~el~~~Gip------~--s   73 (315)
T KOG3019|consen   19 WSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKAR-----------------ITWPELDFPGIP------I--S   73 (315)
T ss_pred             ccccchhccccCcccccccCCCCcccccceEEEecCCCCcc-----------------cccchhcCCCCc------e--e
Confidence            567888877776     333333    89999999987732                 222222221111      0  2


Q ss_pred             ccEEEecCCCC--------------------cccHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           73 FDVVYDINGRE--------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        73 ~d~vi~~a~~~--------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |+++++.++.+                    +..+..+++++.    ..+.+|.+|..++|-+.....++|+.......+
T Consensus        74 c~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~  153 (315)
T KOG3019|consen   74 CVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDI  153 (315)
T ss_pred             hHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHH
Confidence            34444443332                    234677888876    456899999999999888888888887766555


Q ss_pred             h---hhhHHHHHHhhhCCCcEEEEecCeeecCCCCCChhHHHH--HHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          129 H---KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFF--HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       129 ~---~~k~~~E~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      .   +.+++..........+.+++|.|.|.|.+..  ....++  -..-.|.++   |++.|.++|||++|++..+.+++
T Consensus       154 ~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGG--a~~~M~lpF~~g~GGPl---GsG~Q~fpWIHv~DL~~li~~al  228 (315)
T KOG3019|consen  154 LSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGG--ALAMMILPFQMGAGGPL---GSGQQWFPWIHVDDLVNLIYEAL  228 (315)
T ss_pred             HHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCc--chhhhhhhhhhccCCcC---CCCCeeeeeeehHHHHHHHHHHH
Confidence            3   3344444433344589999999999998632  222222  233455665   89999999999999999999999


Q ss_pred             cCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCcccc--ccCCCcccccccccccccchhhhhhcCCCccc
Q 023110          204 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEF--DFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKV  281 (287)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~  281 (287)
                      +++.- .++.|-..+.+.+..|+.+.+.++++.+.  +.+.|+.-.  -||+.........+-...  .|+. ++||+.+
T Consensus       229 e~~~v-~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~--~~pvP~fvvqA~fG~erA~~vLeGqKV~P--qral-~~Gf~f~  302 (315)
T KOG3019|consen  229 ENPSV-KGVINGVAPNPVRNGEFCQQLGSALSRPS--WLPVPDFVVQALFGPERATVVLEGQKVLP--QRAL-ELGFEFK  302 (315)
T ss_pred             hcCCC-CceecccCCCccchHHHHHHHHHHhCCCc--ccCCcHHHHHHHhCccceeEEeeCCcccc--hhHh-hcCceee
Confidence            99763 45999999999999999999999999763  444444322  356554433333333333  4665 5899998


Q ss_pred             ccc
Q 023110          282 LQT  284 (287)
Q Consensus       282 ~~~  284 (287)
                      ||.
T Consensus       303 yp~  305 (315)
T KOG3019|consen  303 YPY  305 (315)
T ss_pred             chH
Confidence            863

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=4e-17  Score=132.64  Aligned_cols=197  Identities=17%  Similarity=0.197  Sum_probs=131.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||||++|++|+++|+++|++|+++.|+.......+.    ........++.++.+|+.|.+++.+++++.     ++|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~   87 (249)
T PRK12825         12 TGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELV----EAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDI   87 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH----HHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999888887654221111    011111356889999999999988877632     6899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+++...                    .+..++++++    +  +.+++|++||...+....          ....|.
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~----------~~~~y~  157 (249)
T PRK12825         88 LVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWP----------GRSNYA  157 (249)
T ss_pred             EEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCC----------CchHHH
Confidence            999998521                    1122334443    3  678999999987753211          112234


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+++       ..+++++++|||.++++.............   ....       ....+++.+|+++++..+
T Consensus       158 ~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~---~~~~-------~~~~~~~~~dva~~~~~~  227 (249)
T PRK12825        158 AAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK---DAET-------PLGRSGTPEDIARAVAFL  227 (249)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh---hccC-------CCCCCcCHHHHHHHHHHH
Confidence            78877765542       358999999999999986432222111111   0011       112388999999999999


Q ss_pred             HcCCc--cCCceEEecCCccc
Q 023110          203 LGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~~~  221 (287)
                      +++..  ..|+.|+++++..+
T Consensus       228 ~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        228 CSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             hCccccCcCCCEEEeCCCEee
Confidence            97643  36899999998654

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.75  E-value=3.8e-17  Score=133.95  Aligned_cols=203  Identities=16%  Similarity=0.127  Sum_probs=133.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|++....+...     .+......+.++++|+.|.+.+.++++.     .++|+
T Consensus        13 tGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   87 (262)
T PRK13394         13 TGAASGIGKEIALELARAGAAVAIADLNQDGANAVAD-----EINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDI   87 (262)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH-----HHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998754322111     1111134578899999999988887763     24899


Q ss_pred             EEecCCCCc--------------------cc----HHHHHHhC-C--CCccEEEEecceeeccCCCCCCCCCCCCCCCc-
Q 023110           76 VYDINGREA--------------------DE----VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-  127 (287)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~ll~~~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-  127 (287)
                      |||+++...                    .+    +..+++++ +  +.+++|++||...+...           .+.. 
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~~  156 (262)
T PRK13394         88 LVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS-----------PLKSA  156 (262)
T ss_pred             EEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC-----------CCCcc
Confidence            999998631                    11    44567776 4  67899999996543211           1122 


Q ss_pred             chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHH-cC-C-CccCCCCCCceeeeeeHHHHHH
Q 023110          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK-AG-R-PIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~-~~-~-~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      |..+|...+.+++       ..+++++++||+.+++|.....+ ........ .. . ...++..+.....+++++|+++
T Consensus       157 y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  235 (262)
T PRK13394        157 YVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQI-PEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQ  235 (262)
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhh-HhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            3478887776553       25799999999999998521111 11000000 00 0 0001122334568999999999


Q ss_pred             HHHHHHcCCc--cCCceEEecCCcc
Q 023110          198 AFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      +++.++....  .+|+.|+++++..
T Consensus       236 a~~~l~~~~~~~~~g~~~~~~~g~~  260 (262)
T PRK13394        236 TVLFLSSFPSAALTGQSFVVSHGWF  260 (262)
T ss_pred             HHHHHcCccccCCcCCEEeeCCcee
Confidence            9999987543  2578899888743

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.75  E-value=4.1e-17  Score=133.21  Aligned_cols=200  Identities=17%  Similarity=0.221  Sum_probs=129.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|++|++++++|+++|++|++++|+...... +.    ..+.....++.++.+|+.|.+++.++++.     .++|+
T Consensus         7 tGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         7 TGAASGIGLAIALALAAAGANVVVNDLGEAGAEA-AA----KVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             cCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654211 11    01111134688899999999977666543     25899


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+++....                    +    +..+++.++  +.+++|++||...+.....          ...|.
T Consensus        82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~----------~~~y~  151 (255)
T TIGR01963        82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPF----------KSAYV  151 (255)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCC----------CchhH
Confidence            9999986311                    1    122333333  5679999999765432211          11233


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCcc-------CCCCCCceeeeeeHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP-------IPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~~D~  195 (287)
                      .+|..++.+++       ..+++++++||+.+++|....     .+..........       ....+...+++++++|+
T Consensus       152 ~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  226 (255)
T TIGR01963       152 AAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEK-----QIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEV  226 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHH-----HHHhhhcccCCCchHHHHHHHHccCccccCcCHHHH
Confidence            77877776553       248999999999999884211     111111111110       01123455689999999


Q ss_pred             HHHHHHHHcCC--ccCCceEEecCCcc
Q 023110          196 ARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      |++++.++...  ..+++.|++.++..
T Consensus       227 a~~~~~~~~~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       227 AETALFLASDAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             HHHHHHHcCccccCccceEEEEcCccc
Confidence            99999999764  23678899988653

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.74  E-value=6.8e-17  Score=131.56  Aligned_cols=195  Identities=17%  Similarity=0.148  Sum_probs=130.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|++|.+++++|+++|++|++++|+.........     .+.....++.++.+|+.|.+++.++++..     .+|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   86 (251)
T PRK12826         12 TGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAE-----LVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDI   86 (251)
T ss_pred             cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654221111     11111245889999999999988888642     6899


Q ss_pred             EEecCCCCcc--------------------cHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+++....                    +..++++++    .  +.++||++||...++.          +..+...|
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~----------~~~~~~~y  156 (251)
T PRK12826         87 LVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV----------GYPGLAHY  156 (251)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc----------CCCCccHH
Confidence            9999876321                    123344443    2  5678999999776411          11122234


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                       .+|..++.+++       ..+++++++||+.++||.........+........++         ..+++++|+|.++..
T Consensus       157 ~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~  227 (251)
T PRK12826        157 AASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPL---------GRLGEPEDIAAAVLF  227 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             88887776653       3589999999999999853221111112222222121         147889999999999


Q ss_pred             HHcCCc--cCCceEEecCCc
Q 023110          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++....  .+|+.|++.++.
T Consensus       228 l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        228 LASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             HhCccccCcCCcEEEECCCc
Confidence            886543  268899998865

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.74  E-value=5.9e-17  Score=132.52  Aligned_cols=198  Identities=17%  Similarity=0.211  Sum_probs=130.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|++|++++++|+++|++|++++|++.......     ..+.....++.++.+|+.|++++..+++..     .+|+
T Consensus        10 tG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   84 (258)
T PRK12429         10 TGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAA-----EALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDI   84 (258)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876532111     111111356889999999999988877642     6899


Q ss_pred             EEecCCCC--------------------ccc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+++..                    ..+    +..++++++  +.++||++||...+...           .+.+.|
T Consensus        85 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y  153 (258)
T PRK12429         85 LVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS-----------AGKAAY  153 (258)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC-----------CCcchh
Confidence            99999852                    112    344555554  67899999997654321           112233


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHc--CCCc-----cCCCCCCceeeeeeHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPI-----PIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~i~~~D  194 (287)
                       .+|...+.+.+       ..++++.++|||.+++|.....     +.....  +.+.     ..+......+.+++++|
T Consensus       154 ~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (258)
T PRK12429        154 VSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQ-----IPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEE  228 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhh-----hhhhccccCCChHHHHHHHHhccCCccccCCHHH
Confidence             77776665442       3579999999999998852111     111000  0000     01112223457999999


Q ss_pred             HHHHHHHHHcCCc--cCCceEEecCCc
Q 023110          195 LARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      +|+++..++....  ..++.|++.++.
T Consensus       229 ~a~~~~~l~~~~~~~~~g~~~~~~~g~  255 (258)
T PRK12429        229 IADYALFLASFAAKGVTGQAWVVDGGW  255 (258)
T ss_pred             HHHHHHHHcCccccCccCCeEEeCCCE
Confidence            9999999886533  257889988764

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.73  E-value=1.7e-16  Score=116.75  Aligned_cols=191  Identities=21%  Similarity=0.289  Sum_probs=137.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      .||||.+|+.|++.++++||+|++++|++++... .            .++.+++.|+.|++++.+.+.  +.|+||..-
T Consensus         6 IgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~-~------------~~~~i~q~Difd~~~~a~~l~--g~DaVIsA~   70 (211)
T COG2910           6 IGASGKAGSRILKEALKRGHEVTAIVRNASKLAA-R------------QGVTILQKDIFDLTSLASDLA--GHDAVISAF   70 (211)
T ss_pred             EecCchhHHHHHHHHHhCCCeeEEEEeChHhccc-c------------ccceeecccccChhhhHhhhc--CCceEEEec
Confidence            4899999999999999999999999999887321 1            477889999999999999998  999999876


Q ss_pred             CCCcc--------cHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHH--Hhh-hCCCcE
Q 023110           81 GREAD--------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES--VLE-SKGVNW  146 (287)
Q Consensus        81 ~~~~~--------~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~--~~~-~~~~~~  146 (287)
                      +....        ....+++.++  ++.|++.++..+-.--.++. --.+.+.-|..|+ ..+..+|.  .++ +.+++|
T Consensus        71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~-rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~W  149 (211)
T COG2910          71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGT-RLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDW  149 (211)
T ss_pred             cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCc-eeecCCCCchhHHHHHHHHHHHHHHHhhccCcce
Confidence            55422        2344777776  78999998876543322221 2233455555565 66666663  333 456999


Q ss_pred             EEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEec
Q 023110          147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  216 (287)
Q Consensus       147 ~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~  216 (287)
                      +.+-|+.+|-|+.+.+-.      -+.+..+..-..+   -+.|+..|.|-+++..++++...++.|-+.
T Consensus       150 TfvSPaa~f~PGerTg~y------rlggD~ll~n~~G---~SrIS~aDYAiA~lDe~E~~~h~rqRftv~  210 (211)
T COG2910         150 TFVSPAAFFEPGERTGNY------RLGGDQLLVNAKG---ESRISYADYAIAVLDELEKPQHIRQRFTVA  210 (211)
T ss_pred             EEeCcHHhcCCccccCce------EeccceEEEcCCC---ceeeeHHHHHHHHHHHHhcccccceeeeec
Confidence            999999999997544321      1122333222222   378999999999999999998877777654

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.2e-16  Score=129.93  Aligned_cols=203  Identities=19%  Similarity=0.236  Sum_probs=130.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+.+.    ..+.....++.++.+|+.+++++..+++.     .++|+
T Consensus        12 tGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (248)
T PRK07806         12 TGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVV----AEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDA   87 (248)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcE
Confidence            7999999999999999999999999997543111111    11111124678899999999988877763     26899


Q ss_pred             EEecCCCC--------------cccHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHH
Q 023110           76 VYDINGRE--------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        76 vi~~a~~~--------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E  136 (287)
                      |||+++..              ..++.++++++.    ...++|++||........    .+.  ......| .+|..+|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~--~~~~~~Y~~sK~a~e  161 (248)
T PRK07806         88 LVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VKT--MPEYEPVARSKRAGE  161 (248)
T ss_pred             EEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----ccC--CccccHHHHHHHHHH
Confidence            99998752              224556666653    335899999854321000    011  1112234 9999999


Q ss_pred             HHhhh-------CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccC
Q 023110          137 SVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       137 ~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (287)
                      .+++.       .++++++++|+.+-++.     ...+...   ..+-...........+++++|+|++++.+++.....
T Consensus       162 ~~~~~l~~~~~~~~i~v~~v~pg~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  233 (248)
T PRK07806        162 DALRALRPELAEKGIGFVVVSGDMIEGTV-----TATLLNR---LNPGAIEARREAAGKLYTVSEFAAEVARAVTAPVPS  233 (248)
T ss_pred             HHHHHHHHHhhccCeEEEEeCCccccCch-----hhhhhcc---CCHHHHHHHHhhhcccCCHHHHHHHHHHHhhccccC
Confidence            87742       57889999988776652     1111100   000000000001236899999999999999877668


Q ss_pred             CceEEecCCccc
Q 023110          210 RQVFNISGEKYV  221 (287)
Q Consensus       210 ~~~~~i~~~~~~  221 (287)
                      |++|++++++..
T Consensus       234 g~~~~i~~~~~~  245 (248)
T PRK07806        234 GHIEYVGGADYF  245 (248)
T ss_pred             ccEEEecCccce
Confidence            899999998743

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.7e-16  Score=128.00  Aligned_cols=195  Identities=17%  Similarity=0.205  Sum_probs=131.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+........     ..+.....++.++.+|+.+.+++..+++..     .+|+
T Consensus        12 tGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (250)
T PRK07774         12 TGAAGGIGQAYAEALAREGASVVVADINAEGAERVA-----KQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDY   86 (250)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421111     011111235778999999998887777642     6899


Q ss_pred             EEecCCCCc-----------------------ccHHHHHHhCC------CCccEEEEecceeeccCCCCCCCCCCCCCCC
Q 023110           76 VYDINGREA-----------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        76 vi~~a~~~~-----------------------~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (287)
                      |||++|...                       .++.++++++.      +.+++|++||...|..             ..
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------------~~  153 (250)
T PRK07774         87 LVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY-------------SN  153 (250)
T ss_pred             EEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC-------------cc
Confidence            999998621                       12233344322      4569999999887531             11


Q ss_pred             cchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      .|..+|...|.+++       ..++++++++||.+..+.........+.....++.+...         +.+++|+|+++
T Consensus       154 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~d~a~~~  224 (250)
T PRK07774        154 FYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSR---------MGTPEDLVGMC  224 (250)
T ss_pred             ccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCC---------CcCHHHHHHHH
Confidence            24489998887663       247899999999988775332222233334444333221         34589999999


Q ss_pred             HHHHcCCc--cCCceEEecCCcccC
Q 023110          200 VQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      +.++....  ..++.|++.++..++
T Consensus       225 ~~~~~~~~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        225 LFLLSDEASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             HHHhChhhhCcCCCEEEECCCeecc
Confidence            99987642  367899999987543

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.71  E-value=4.7e-16  Score=128.52  Aligned_cols=210  Identities=21%  Similarity=0.224  Sum_probs=138.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh--cCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|+.........     .+...  ..++.++.+|+.|++++..++++.     ++
T Consensus        13 tGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   87 (276)
T PRK05875         13 TGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAE-----EIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRL   87 (276)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----HHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999998654221111     01100  246788999999999888877643     68


Q ss_pred             cEEEecCCCCc---------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        74 d~vi~~a~~~~---------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (287)
                      |++||+++...                     .+...++++    +.  +..+++++||...+...           .+.
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~~  156 (276)
T PRK05875         88 HGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH-----------RWF  156 (276)
T ss_pred             CEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC-----------CCC
Confidence            99999998421                     112233333    21  34589999998764321           122


Q ss_pred             c-chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChh-HHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          127 S-RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       127 ~-~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      + |..+|..+|.+++       ..+++++++|||.+.++....... ...........+         ...+++++|+|+
T Consensus       157 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~  227 (276)
T PRK05875        157 GAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTP---------LPRVGEVEDVAN  227 (276)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCC---------CCCCcCHHHHHH
Confidence            3 4499999988774       246899999999987763211000 011111111111         123566999999


Q ss_pred             HHHHHHcCCcc--CCceEEecCCccc----CHHHHHHHHHHHhC
Q 023110          198 AFVQVLGNEKA--SRQVFNISGEKYV----TFDGLARACAKAAG  235 (287)
Q Consensus       198 ~~~~~~~~~~~--~~~~~~i~~~~~~----s~~e~~~~i~~~~g  235 (287)
                      ++..+++++..  .+++++++++..+    +..|+++.+....+
T Consensus       228 ~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  271 (276)
T PRK05875        228 LAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADG  271 (276)
T ss_pred             HHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHH
Confidence            99999987543  4789999998876    67777777665544

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.71  E-value=5.8e-17  Score=133.84  Aligned_cols=209  Identities=19%  Similarity=0.193  Sum_probs=138.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+........        ......+.++++|+.|.+++..+++.     .++|+
T Consensus         9 tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          9 TGASRGFGRAWTEAALERGDRVVATARDTATLADLA--------EKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865522111        11134678899999999888777663     26899


Q ss_pred             EEecCCCCcc--------------------cH----HHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||++|....                    ++    +.++..++  +.+++|++||...+.....          ...|.
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~----------~~~Y~  150 (275)
T PRK08263         81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPM----------SGIYH  150 (275)
T ss_pred             EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCC----------ccHHH
Confidence            9999987321                    12    23333333  5679999999776543211          11234


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-----hHHHHHHHHcCCCccCCCCCCceeee-eeHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQL-GHVKDLA  196 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~D~a  196 (287)
                      .+|..++.+.+       ..+++++++|||.+..+......     .... ......  +   ........+ ++.+|+|
T Consensus       151 ~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~-~~~~~~--~---~~~~~~~~~~~~p~dva  224 (275)
T PRK08263        151 ASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAY-DTLREE--L---AEQWSERSVDGDPEAAA  224 (275)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhh-hhHHHH--H---HHHHHhccCCCCHHHHH
Confidence            88888776552       36899999999988765421100     0000 000000  0   000011234 7899999


Q ss_pred             HHHHHHHcCCccCCceEEecCCcccCHHHHHHHHHHH
Q 023110          197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKA  233 (287)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~  233 (287)
                      ++++.+++++...++.|+..+++.+++.++.+.+.+.
T Consensus       225 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (275)
T PRK08263        225 EALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATW  261 (275)
T ss_pred             HHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHH
Confidence            9999999987766655555556778999999888875

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.70  E-value=5.3e-16  Score=126.83  Aligned_cols=205  Identities=14%  Similarity=0.115  Sum_probs=138.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+..........     +  ...+++++.+|+.|.+++..+++..     ++|+
T Consensus         8 tGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~-----~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          8 TGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADA-----L--GDARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----h--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986652211110     0  0246889999999999888777632     5899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+++...                    .+...+++++    .  +..++|++||...+... .          ...|.
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~----------~~~y~  149 (257)
T PRK07074         81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-G----------HPAYS  149 (257)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-C----------CcccH
Confidence            999998631                    1122233333    2  45689999996432110 0          01244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC--ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      .+|...+.+++       ..++++..+|||.++++....  .....+......         .....++++++|++++++
T Consensus       150 ~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~d~a~~~~  220 (257)
T PRK07074        150 AAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKK---------WYPLQDFATPDDVANAVL  220 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHh---------cCCCCCCCCHHHHHHHHH
Confidence            88888776663       247999999999998874211  001112111111         112357899999999999


Q ss_pred             HHHcCC--ccCCceEEecCCcccCHHHHHHHHHH
Q 023110          201 QVLGNE--KASRQVFNISGEKYVTFDGLARACAK  232 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~~s~~e~~~~i~~  232 (287)
                      .++...  ...|..+++.++...+..|+.+.+.+
T Consensus       221 ~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        221 FLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             HHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence            999653  23578889999888899999988765

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.69  E-value=2.9e-16  Score=126.84  Aligned_cols=184  Identities=18%  Similarity=0.237  Sum_probs=126.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+.+.+     +.  ....+++.+|+.|.+++..++++.     ++|+
T Consensus        13 tGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~-----~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828         13 TGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPG-----VP--ADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             ECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHH-----Hh--hcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            69999999999999999999999999987553221110     00  235778899999998888777642     6899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+++...                    .++.++++++    .  +.+++|++||...++...           +...|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~y  154 (239)
T PRK12828         86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGP-----------GMGAY  154 (239)
T ss_pred             EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCC-----------Ccchh
Confidence            999988531                    1233344443    2  678999999988764321           12233


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                       .+|...+.+++       ..++++.++|||.++++.....              .+  .  .....+++.+|+|+++..
T Consensus       155 ~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~--------------~~--~--~~~~~~~~~~dva~~~~~  216 (239)
T PRK12828        155 AAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD--------------MP--D--ADFSRWVTPEQIAAVIAF  216 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc--------------CC--c--hhhhcCCCHHHHHHHHHH
Confidence             77776665542       3589999999999998731100              00  0  012237899999999999


Q ss_pred             HHcCCc--cCCceEEecCCcc
Q 023110          202 VLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~  220 (287)
                      ++.+..  ..|+.+.+.+++.
T Consensus       217 ~l~~~~~~~~g~~~~~~g~~~  237 (239)
T PRK12828        217 LLSDEAQAITGASIPVDGGVA  237 (239)
T ss_pred             HhCcccccccceEEEecCCEe
Confidence            997643  2578888888764

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.68  E-value=7.4e-16  Score=127.14  Aligned_cols=193  Identities=18%  Similarity=0.160  Sum_probs=125.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..     ..+.....++.++.+|+.+.+++.++++..     ++|+
T Consensus        16 tGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   90 (274)
T PRK07775         16 AGASSGIGAATAIELAAAGFPVALGARRVEKCEELV-----DKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEV   90 (274)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999998764421110     111111246788899999999998877642     6899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+++...                    .++.+++++    +.  +..+||++||...+....          ....|.
T Consensus        91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~  160 (274)
T PRK07775         91 LVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP----------HMGAYG  160 (274)
T ss_pred             EEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC----------CcchHH
Confidence            999998631                    112223333    22  445799999987654221          111244


Q ss_pred             hhhHHHHHHhhh-------CCCcEEEEecCeeecCCCCC---ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          130 KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       130 ~~k~~~E~~~~~-------~~~~~~ilR~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      .+|...|.+++.       .+++++++|||.+.++....   .....++.....      .+ ......+++++|+|+++
T Consensus       161 ~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~dva~a~  233 (274)
T PRK07775        161 AAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAK------WG-QARHDYFLRASDLARAI  233 (274)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHH------hc-ccccccccCHHHHHHHH
Confidence            899998877642       38999999999886542111   111111111110      01 11235689999999999


Q ss_pred             HHHHcCCccCCceEEec
Q 023110          200 VQVLGNEKASRQVFNIS  216 (287)
Q Consensus       200 ~~~~~~~~~~~~~~~i~  216 (287)
                      +.+++++. .+.+||+.
T Consensus       234 ~~~~~~~~-~~~~~~~~  249 (274)
T PRK07775        234 TFVAETPR-GAHVVNME  249 (274)
T ss_pred             HHHhcCCC-CCCeeEEe
Confidence            99998764 45577776

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.68  E-value=2.7e-15  Score=122.89  Aligned_cols=192  Identities=15%  Similarity=0.164  Sum_probs=126.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+... .+..     ..+......+.++.+|+.+.+++.+++++     .++|+
T Consensus        14 tGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (260)
T PRK12823         14 TGAAQGIGRGVALRAAAEGARVVLVDRSELV-HEVA-----AELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDV   87 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCchHH-HHHH-----HHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeE
Confidence            7999999999999999999999999997432 1110     01111124577899999998888777763     26899


Q ss_pred             EEecCCCCcc-------------------------cHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD-------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~-------------------------~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||....                         .++.+++.+.  +..++|++||...++..            ...|
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------~~~Y  155 (260)
T PRK12823         88 LINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGIN------------RVPY  155 (260)
T ss_pred             EEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCC------------CCcc
Confidence            9999974210                         1224455543  45689999998765311            1224


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCC------------CChhHHHHHHHHcCCCccCCCCCCceeee
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY------------NPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                      ..+|...+.+.+       ..++++..++||.+++|...            ......+......+.++.         -+
T Consensus       156 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  226 (260)
T PRK12823        156 SAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMK---------RY  226 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcc---------cC
Confidence            589988887663       24899999999999997310            001112222222222221         23


Q ss_pred             eeHHHHHHHHHHHHcCCc--cCCceEEecCCc
Q 023110          190 GHVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       190 i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      .+.+|+|++++.++....  ..|+.+++.+++
T Consensus       227 ~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        227 GTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             CCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            368999999999886542  367888988764

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.67  E-value=7.8e-16  Score=125.85  Aligned_cols=200  Identities=17%  Similarity=0.224  Sum_probs=131.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||.+++++|+++|++|++++|+.........        .....+.++.+|+.|.+++..+++..     .+|+
T Consensus        12 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067         12 TGAASGIGEAVAERYLAEGARVVIADIKPARARLAAL--------EIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH--------HhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765321111        11246888999999999888877642     6899


Q ss_pred             EEecCCCC--------------------cccHHHHHHhCC-------CCccEEEEeccee-eccCCCCCCCCCCCCCCCc
Q 023110           76 VYDINGRE--------------------ADEVEPILDALP-------NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~--------------------~~~~~~ll~~~~-------~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~  127 (287)
                      +||+++..                    ..+...+++++.       ...++|++||... ++.            .+..
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~  151 (257)
T PRK07067         84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE------------ALVS  151 (257)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC------------CCCc
Confidence            99998852                    112344444432       1247999998643 221            1222


Q ss_pred             -chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHc---CCCccCCCCCCceeeeeeHHHHH
Q 023110          128 -RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA---GRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       128 -~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                       |..+|...+.+.+       ..++++++++||.++++.... .. ..+.....   +......+.......+++.+|+|
T Consensus       152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  229 (257)
T PRK07067        152 HYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQ-VD-ALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLT  229 (257)
T ss_pred             hhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhh-hh-hhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHH
Confidence             3488988776653       368999999999999874211 00 00000000   00001112223345788999999


Q ss_pred             HHHHHHHcCCc--cCCceEEecCCcccC
Q 023110          197 RAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      +++..++....  ..|++|++.++..+|
T Consensus       230 ~~~~~l~s~~~~~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        230 GMALFLASADADYIVAQTYNVDGGNWMS  257 (257)
T ss_pred             HHHHHHhCcccccccCcEEeecCCEeCC
Confidence            99999997643  368899999987554

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=2.5e-15  Score=122.43  Aligned_cols=197  Identities=14%  Similarity=0.072  Sum_probs=126.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||++++++|+++|++|++..|+.........    ........++.++.+|+.+.+++..+++.     .++|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (252)
T PRK06077         12 TGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETL----KMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADI   87 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999887765432111000    01111123567889999999888777663     26899


Q ss_pred             EEecCCCCcc--------------------cHHHHHH----hCCCCccEEEEecceeeccCCCCCCCCCCCCCCCcch-h
Q 023110           76 VYDINGREAD--------------------EVEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~ll~----~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (287)
                      |||++|....                    +...+++    .++...+||++||...+..           ..+...| .
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~  156 (252)
T PRK06077         88 LVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP-----------AYGLSIYGA  156 (252)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC-----------CCCchHHHH
Confidence            9999986211                    1222233    3333468999999877532           2223344 8


Q ss_pred             hhHHHHHHhh----h--CCCcEEEEecCeeecCCCCC--ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          131 GKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       131 ~k~~~E~~~~----~--~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      +|..+|.+++    +  .++.+.+++||.+.++....  ............  ..      .....+++++|+|++++.+
T Consensus       157 sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~dva~~~~~~  228 (252)
T PRK06077        157 MKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE--KF------TLMGKILDPEEVAEFVAAI  228 (252)
T ss_pred             HHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHH--hc------CcCCCCCCHHHHHHHHHHH
Confidence            8988887663    2  26889999999987763210  000000000000  01      1123579999999999999


Q ss_pred             HcCCccCCceEEecCCcc
Q 023110          203 LGNEKASRQVFNISGEKY  220 (287)
Q Consensus       203 ~~~~~~~~~~~~i~~~~~  220 (287)
                      +......+++|++.++..
T Consensus       229 ~~~~~~~g~~~~i~~g~~  246 (252)
T PRK06077        229 LKIESITGQVFVLDSGES  246 (252)
T ss_pred             hCccccCCCeEEecCCee
Confidence            976655788999999864

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.66  E-value=4.8e-15  Score=120.21  Aligned_cols=193  Identities=18%  Similarity=0.221  Sum_probs=127.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|++|++++++|.++|++|++++|++.......     ........++.++.+|+.|++++.++++.     ..+|+
T Consensus        11 tGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (246)
T PRK05653         11 TGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALA-----AELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDI   85 (246)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999875522111     11111234688899999999988887763     25799


Q ss_pred             EEecCCCCcc--------------------cHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCc-c
Q 023110           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-R  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~  128 (287)
                      |||+++....                    +..++++++    .  +.+++|++||......           ..+.. |
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~-----------~~~~~~y  154 (246)
T PRK05653         86 LVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG-----------NPGQTNY  154 (246)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC-----------CCCCcHh
Confidence            9999876311                    123344443    2  5679999998754321           11122 3


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      ..+|...|.+.+       ..+++++++||+.++++.... +...........  ++       ...+++.+|+++++..
T Consensus       155 ~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~-~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~  224 (246)
T PRK05653        155 SAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG-LPEEVKAEILKE--IP-------LGRLGQPEEVANAVAF  224 (246)
T ss_pred             HhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh-hhHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHH
Confidence            377776655442       357999999999999985321 111111111111  11       1457889999999999


Q ss_pred             HHcCC--ccCCceEEecCCc
Q 023110          202 VLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~  219 (287)
                      ++...  ...++.|+++++.
T Consensus       225 ~~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        225 LASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             HcCchhcCccCCEEEeCCCe
Confidence            98653  2367899998875

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.66  E-value=2.5e-15  Score=122.68  Aligned_cols=197  Identities=21%  Similarity=0.233  Sum_probs=130.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|++|++++++|+++|++|++++|+.....+...     .+......+.++.+|+.|.+++..+++..     .+|+
T Consensus        16 tGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   90 (255)
T PRK07523         16 TGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAE-----SLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDI   90 (255)
T ss_pred             ECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654221111     11111235788999999999988887642     5899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhCC------CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+++...                    .++.++++++.      +..++|++||......           ......|
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------~~~~~~y  159 (255)
T PRK07523         91 LVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALA-----------RPGIAPY  159 (255)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccC-----------CCCCccH
Confidence            999998631                    12233444432      4578999998654321           1122234


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                       .+|...|.+++       ..++++.++|||.+.++...... ...+...+....++         ..+...+|+|.+++
T Consensus       160 ~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~  230 (255)
T PRK07523        160 TATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPA---------GRWGKVEELVGACV  230 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence             88888887653       45899999999999888422111 11122222222221         23567999999999


Q ss_pred             HHHcCCc--cCCceEEecCCcccC
Q 023110          201 QVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      .++....  -.|+.+++.++...|
T Consensus       231 ~l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        231 FLASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             HHcCchhcCccCcEEEECCCeecc
Confidence            9987533  257899998876544

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.66  E-value=5.4e-16  Score=126.38  Aligned_cols=193  Identities=15%  Similarity=0.190  Sum_probs=125.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|++|++++++|+++|++|+++.|+..........     .. ....+.++++|+.|++++.++++..     ++|+
T Consensus        11 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~-----~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   84 (252)
T PRK06138         11 TGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAA-----IA-AGGRAFARQGDVGSAEAVEALVDFVAARWGRLDV   84 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHH-----Hh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542211110     00 1246889999999999988877642     7899


Q ss_pred             EEecCCCCc--------------------ccH----HHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc-c
Q 023110           76 VYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-R  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~  128 (287)
                      |||+++...                    .++    ..++++++  +.+++|++||.......           ...+ |
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~~~~Y  153 (252)
T PRK06138         85 LVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG-----------RGRAAY  153 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC-----------CCccHH
Confidence            999998631                    112    23444443  56789999997543211           1122 3


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh----hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ..+|...+.+++       ..+++++++|||.++++.....+    .+..........        .....+++.+|+|+
T Consensus       154 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~d~a~  225 (252)
T PRK06138        154 VASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRAR--------HPMNRFGTAEEVAQ  225 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhc--------CCCCCCcCHHHHHH
Confidence            488888776653       24899999999999887421100    000111111100        01113678999999


Q ss_pred             HHHHHHcCCcc--CCceEEecCC
Q 023110          198 AFVQVLGNEKA--SRQVFNISGE  218 (287)
Q Consensus       198 ~~~~~~~~~~~--~~~~~~i~~~  218 (287)
                      +++.++..+..  .|..+.+.++
T Consensus       226 ~~~~l~~~~~~~~~g~~~~~~~g  248 (252)
T PRK06138        226 AALFLASDESSFATGTTLVVDGG  248 (252)
T ss_pred             HHHHHcCchhcCccCCEEEECCC
Confidence            99999877542  4667777665

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.66  E-value=3.1e-15  Score=122.12  Aligned_cols=195  Identities=18%  Similarity=0.246  Sum_probs=124.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEE-EcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc---------
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------   70 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~---------   70 (287)
                      |||+|+||++++++|+++|++|+++ .|+.........     .+......+.++.+|+.|.+++.+++++         
T Consensus        12 tGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~   86 (254)
T PRK12746         12 TGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIR-----EIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRV   86 (254)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH-----HHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcccc
Confidence            7999999999999999999999875 565433211110     1111124678899999999998887764         


Q ss_pred             --CCccEEEecCCCCcc--------------------cHHHHHHhC----CCCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           71 --KGFDVVYDINGREAD--------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        71 --~~~d~vi~~a~~~~~--------------------~~~~ll~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                        .++|+|||++|....                    ++.++++++    ....++|++||..++....          .
T Consensus        87 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~----------~  156 (254)
T PRK12746         87 GTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFT----------G  156 (254)
T ss_pred             CCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCC----------C
Confidence              258999999987311                    122333332    2345899999987754211          1


Q ss_pred             CCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ...|..+|...|.+.+       ..++++++++||.++++..........+........        ....+++++|+|+
T Consensus       157 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~dva~  228 (254)
T PRK12746        157 SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSS--------VFGRIGQVEDIAD  228 (254)
T ss_pred             CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcC--------CcCCCCCHHHHHH
Confidence            1124488988877652       357999999999998874211100011111111111        1124568999999


Q ss_pred             HHHHHHcCCc--cCCceEEecCC
Q 023110          198 AFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~  218 (287)
                      ++..++....  ..|+.|++.++
T Consensus       229 ~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        229 AVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             HHHHHcCcccCCcCCCEEEeCCC
Confidence            9988886543  25789999876

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.65  E-value=7.6e-15  Score=119.90  Aligned_cols=198  Identities=18%  Similarity=0.261  Sum_probs=127.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|.++|++|++++|+.........    ..+.....++.++.+|+.+++++.++++..     .+|+
T Consensus         8 tG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12745          8 TGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQ----QELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDC   83 (256)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999987543111110    011111246889999999998887776532     6899


Q ss_pred             EEecCCCCc----------------------ccHHHHHHhC----C---C-----CccEEEEecceeeccCCCCCCCCCC
Q 023110           76 VYDINGREA----------------------DEVEPILDAL----P---N-----LEQFIYCSSAGVYLKSDLLPHCETD  121 (287)
Q Consensus        76 vi~~a~~~~----------------------~~~~~ll~~~----~---~-----~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (287)
                      |||++|...                      .++.++++++    .   +     ..++|++||...+....        
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------  155 (256)
T PRK12745         84 LVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP--------  155 (256)
T ss_pred             EEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC--------
Confidence            999998621                      1122333332    1   1     45799999976542211        


Q ss_pred             CCCCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHH
Q 023110          122 TVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       122 ~~~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                        ....|..+|..+|.+++       ..+++++++|||.+.++.... +..........+ ..+       ...+.+.+|
T Consensus       156 --~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~-~~~~~~~~~~~~-~~~-------~~~~~~~~d  224 (256)
T PRK12745        156 --NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP-VTAKYDALIAKG-LVP-------MPRWGEPED  224 (256)
T ss_pred             --CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc-cchhHHhhhhhc-CCC-------cCCCcCHHH
Confidence              11224488988887653       358999999999998875321 111221111111 111       124668999


Q ss_pred             HHHHHHHHHcCCc--cCCceEEecCCccc
Q 023110          195 LARAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (287)
                      +++++..++....  ..|+.|++.++...
T Consensus       225 ~a~~i~~l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        225 VARAVAALASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             HHHHHHHHhCCcccccCCCEEEECCCeec
Confidence            9999998886532  36789999887543

>PRK09186 flagellin modification protein A; Provisional

Probab=99.65  E-value=7.3e-15  Score=120.04  Aligned_cols=201  Identities=14%  Similarity=0.096  Sum_probs=127.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.+...+...++..   ......+.++.+|+.|++++.++++..     .+|+
T Consensus        10 tGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~   86 (256)
T PRK09186         10 TGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGK---EFKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDG   86 (256)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHh---hcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccE
Confidence            79999999999999999999999999986553211110000   000134667899999999998888742     3899


Q ss_pred             EEecCCCCc-----------------------c----cHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCC-CC
Q 023110           76 VYDINGREA-----------------------D----EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-DP  125 (287)
Q Consensus        76 vi~~a~~~~-----------------------~----~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-~~  125 (287)
                      |||+|+...                       .    .++.+++.++  +..++|++||...+..... ...+..+. .+
T Consensus        87 vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~~~~~~~  165 (256)
T PRK09186         87 AVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-EIYEGTSMTSP  165 (256)
T ss_pred             EEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-hhccccccCCc
Confidence            999986321                       0    1234555554  5679999999665432211 11222222 22


Q ss_pred             CcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      ..|..+|...+.+.+       ..++++++++||.++++..     ..+........+         ...+++.+|+|++
T Consensus       166 ~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-----~~~~~~~~~~~~---------~~~~~~~~dva~~  231 (256)
T PRK09186        166 VEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-----EAFLNAYKKCCN---------GKGMLDPDDICGT  231 (256)
T ss_pred             chhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-----HHHHHHHHhcCC---------ccCCCCHHHhhhh
Confidence            334588988887653       3579999999998876531     112222111110         1246889999999


Q ss_pred             HHHHHcCCc--cCCceEEecCCc
Q 023110          199 FVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++.++....  .+|+.+.+.++.
T Consensus       232 ~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        232 LVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             HhheeccccccccCceEEecCCc
Confidence            999997543  257777777653

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.65  E-value=6.2e-15  Score=121.85  Aligned_cols=193  Identities=17%  Similarity=0.176  Sum_probs=123.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|++..... +..       ....++..+.+|+.|.+++..+++..     ++|+
T Consensus        10 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-l~~-------~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180         10 TGVSSGFGRALAQAALAAGHRVVGTVRSEAARAD-FEA-------LHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV   81 (277)
T ss_pred             ecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHH-HHh-------hcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998765221 110       01246788999999999888877642     5899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||++|...                    .++.+++++    ++  +..++|++||...+...           .+...|
T Consensus        82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~-----------~~~~~Y  150 (277)
T PRK06180         82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM-----------PGIGYY  150 (277)
T ss_pred             EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC-----------CCcchh
Confidence            999998732                    123344444    32  45689999997654321           122334


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC------hhHHH---HHHHHcCCCccCCCCCCceeeeeeH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------VEEWF---FHRLKAGRPIPIPGSGIQVTQLGHV  192 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~------~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~  192 (287)
                       .+|..+|.+.+       ..+++++++|||.+.++.....      .....   ........ ..  ..   ...+.++
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~---~~~~~~~  224 (277)
T PRK06180        151 CGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAR-EA--KS---GKQPGDP  224 (277)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHH-Hh--hc---cCCCCCH
Confidence             88888776553       2589999999999987632110      01111   11110000 00  01   1234578


Q ss_pred             HHHHHHHHHHHcCCccCCceEEecCCc
Q 023110          193 KDLARAFVQVLGNEKASRQVFNISGEK  219 (287)
Q Consensus       193 ~D~a~~~~~~~~~~~~~~~~~~i~~~~  219 (287)
                      +|+|++++.+++.+.. ...|.++...
T Consensus       225 ~dva~~~~~~l~~~~~-~~~~~~g~~~  250 (277)
T PRK06180        225 AKAAQAILAAVESDEP-PLHLLLGSDA  250 (277)
T ss_pred             HHHHHHHHHHHcCCCC-CeeEeccHHH
Confidence            9999999999987653 3345554433

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.64  E-value=1.8e-15  Score=123.18  Aligned_cols=193  Identities=16%  Similarity=0.170  Sum_probs=126.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|++|++++++|+++|++|++++|+.........     .+.. ...+.++.+|+.|++++..++++.     ++|+
T Consensus        11 tGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   84 (251)
T PRK07231         11 TGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAA-----EILA-GGRAIAVAADVSDEADVEAAVAAALERFGSVDI   84 (251)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999999755321111     0000 245789999999999998887643     6899


Q ss_pred             EEecCCCCcc-------------------------cHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD-------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~-------------------------~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||+++....                         .+..+++.+.  +.++||++||...+....           +...
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~  153 (251)
T PRK07231         85 LVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRP-----------GLGW  153 (251)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCC-----------CchH
Confidence            9999986311                         1233444443  567899999987754321           2223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChh---HHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE---EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      | .+|...+.+.+       ..+++++.++||.+.++.......   ..........         .....+++++|+|.
T Consensus       154 y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~  224 (251)
T PRK07231        154 YNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT---------IPLGRLGTPEDIAN  224 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC---------CCCCCCcCHHHHHH
Confidence            4 78877765542       348999999999987664211110   0111111111         11234679999999


Q ss_pred             HHHHHHcCCc--cCCceEEecCCc
Q 023110          198 AFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      +++.++....  ..|..+.+.++.
T Consensus       225 ~~~~l~~~~~~~~~g~~~~~~gg~  248 (251)
T PRK07231        225 AALFLASDEASWITGVTLVVDGGR  248 (251)
T ss_pred             HHHHHhCccccCCCCCeEEECCCc
Confidence            9999996543  246677777654

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.64  E-value=3.5e-15  Score=123.59  Aligned_cols=201  Identities=14%  Similarity=0.115  Sum_probs=127.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|++|+++++.|+++|++|++++|+.+.........   .......+++++.+|+.|++++.. ++.     ..+|+
T Consensus         9 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~   84 (280)
T PRK06914          9 TGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQA---TQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDL   84 (280)
T ss_pred             ECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH---HhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeE
Confidence            799999999999999999999999999865422111000   000002468899999999988876 442     25799


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc-c
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-R  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~  128 (287)
                      |||+++...                    .++..++++    ++  +..++|++||...+...           .+.. |
T Consensus        85 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~Y  153 (280)
T PRK06914         85 LVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGF-----------PGLSPY  153 (280)
T ss_pred             EEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCC-----------CCCchh
Confidence            999998632                    122233333    44  56789999986442111           1122 3


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC------------hhHHHHHHHHcCCCccCCCCCCceeee
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------------VEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                      ..+|...+.+++       ..+++++++|||.+.++.....            .....+..+...  +   .  .....+
T Consensus       154 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~--~~~~~~  226 (280)
T PRK06914        154 VSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKH--I---N--SGSDTF  226 (280)
T ss_pred             HHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHH--H---h--hhhhcc
Confidence            488888776653       3589999999999988731100            000011111100  0   0  112356


Q ss_pred             eeHHHHHHHHHHHHcCCccCCceEEecCCcccCHH
Q 023110          190 GHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD  224 (287)
Q Consensus       190 i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~  224 (287)
                      ++++|+|++++.+++++... ..|+++++..+++.
T Consensus       227 ~~~~dva~~~~~~~~~~~~~-~~~~~~~~~~~~~~  260 (280)
T PRK06914        227 GNPIDVANLIVEIAESKRPK-LRYPIGKGVKLMIL  260 (280)
T ss_pred             CCHHHHHHHHHHHHcCCCCC-cccccCCchHHHHH
Confidence            88999999999999887643 57888876655544

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.64  E-value=2e-15  Score=123.62  Aligned_cols=204  Identities=13%  Similarity=0.095  Sum_probs=128.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh--cCCeEEEEecCCChHHHHhhhhc-----CCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~-----~~~   73 (287)
                      |||+|+||+++++.|.++|++|++++|+.........     .+...  ...+.++.+|+.+.+++..++++     ..+
T Consensus         8 tG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   82 (259)
T PRK12384          8 IGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQ-----EINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRV   82 (259)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999998654221110     01110  13588999999999888877764     268


Q ss_pred             cEEEecCCCC--------------------cccHH----HHHHhCC--C-CccEEEEecce-eeccCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGRE--------------------ADEVE----PILDALP--N-LEQFIYCSSAG-VYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~--------------------~~~~~----~ll~~~~--~-~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~~  125 (287)
                      |+|||++|..                    +.++.    .+++.+.  + ..++|++||.. .++..           ..
T Consensus        83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~-----------~~  151 (259)
T PRK12384         83 DLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK-----------HN  151 (259)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC-----------CC
Confidence            9999999852                    11222    3333332  3 35899998854 22211           01


Q ss_pred             CcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHH--cCCCccCCCCCCceeeeeeHHHHH
Q 023110          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK--AGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ..|..+|...+.+++       ..++++.++|||.++++.......+.+.....  .++....+.+......+++.+|++
T Consensus       152 ~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~  231 (259)
T PRK12384        152 SGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVL  231 (259)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHH
Confidence            124488887665542       46899999999998876432222222111100  000000111222345678899999


Q ss_pred             HHHHHHHcCCc--cCCceEEecCCcc
Q 023110          197 RAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      .++..++.+..  ..|+.|++.+++.
T Consensus       232 ~~~~~l~~~~~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        232 NMLLFYASPKASYCTGQSINVTGGQV  257 (259)
T ss_pred             HHHHHHcCcccccccCceEEEcCCEE
Confidence            99998886542  2578999998764

>PRK06128 oxidoreductase; Provisional

Probab=99.64  E-value=1.3e-14  Score=121.23  Aligned_cols=198  Identities=19%  Similarity=0.255  Sum_probs=130.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccc-ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|+++|++|++..++..... ..+.    ..+.....++.++.+|+.+.+++.+++++.     ++|
T Consensus        61 TGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  136 (300)
T PRK06128         61 TGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVV----QLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLD  136 (300)
T ss_pred             ecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHH----HHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999998877643211 1110    111111346788999999998888877642     689


Q ss_pred             EEEecCCCCc---------------------ccHHHHHHhC----CCCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           75 VVYDINGREA---------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        75 ~vi~~a~~~~---------------------~~~~~ll~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      ++||++|...                     .++..+++++    ....++|++||...|.....          ...|.
T Consensus       137 ~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------~~~Y~  206 (300)
T PRK06128        137 ILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPT----------LLDYA  206 (300)
T ss_pred             EEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCC----------chhHH
Confidence            9999998631                     1223344443    33358999999887643221          11244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      .+|...+.+++       ..++++.+++||.+.+|.... ..............++         ..+.+.+|+|.+++.
T Consensus       207 asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva~~~~~  277 (300)
T PRK06128        207 STKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPM---------KRPGQPVEMAPLYVL  277 (300)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCC---------CCCcCHHHHHHHHHH
Confidence            88998887663       358999999999999985321 1112222222221111         235578999999999


Q ss_pred             HHcCCc--cCCceEEecCCccc
Q 023110          202 VLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (287)
                      ++....  ..|+.|++.++..+
T Consensus       278 l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        278 LASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             HhCccccCccCcEEeeCCCEeC
Confidence            886533  26889999988654

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.64  E-value=1.7e-15  Score=129.24  Aligned_cols=231  Identities=16%  Similarity=0.187  Sum_probs=153.7

Q ss_pred             CCcccchHHHHHHHHHHcC---CeEEEEEcCCcccc--ccCCCCChhhhhh--------hcCCeEEEEecCCCh------
Q 023110            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIA--QQLPGESDQEFAE--------FSSKILHLKGDRKDY------   61 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g---~~V~~~~r~~~~~~--~~~~~~~~~~~~~--------~~~~~~~i~~D~~d~------   61 (287)
                      ||||||+|+-+++.|++.-   -+++.+.|.+....  +.+..+.+..+.+        ...++..+.||+.++      
T Consensus        18 TG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGis~   97 (467)
T KOG1221|consen   18 TGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPDLGISE   97 (467)
T ss_pred             EcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcccCCCh
Confidence            7999999999999999852   38899998776521  1121111111111        135788899999753      


Q ss_pred             HHHHhhhhcCCccEEEecCCC-------------CcccHHHHHHhCC---CCccEEEEecceeeccC---CCCCCCCCC-
Q 023110           62 DFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKS---DLLPHCETD-  121 (287)
Q Consensus        62 ~~~~~~~~~~~~d~vi~~a~~-------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~---~~~~~~e~~-  121 (287)
                      .+++.+.+  .+|+|||+|+.             |..++.++++.|+   ..+-++++||..+.-..   ...++.+.. 
T Consensus        98 ~D~~~l~~--eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~  175 (467)
T KOG1221|consen   98 SDLRTLAD--EVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPET  175 (467)
T ss_pred             HHHHHHHh--cCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCcccc
Confidence            45565565  89999999987             5677888888877   78899999998775211   111111111 


Q ss_pred             --------------------------CCCCCcchhhhHHHHHHhh--hCCCcEEEEecCeeecCCCCCChhHHHHHH---
Q 023110          122 --------------------------TVDPKSRHKGKLNTESVLE--SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR---  170 (287)
Q Consensus       122 --------------------------~~~~~~~~~~k~~~E~~~~--~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~---  170 (287)
                                                ...|..|..+|..+|.++.  ..+++.+|+||+.|.+.... + ++.++..   
T Consensus       176 ~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~E-P-~pGWidn~~g  253 (467)
T KOG1221|consen  176 CNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKE-P-FPGWIDNLNG  253 (467)
T ss_pred             CCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccC-C-CCCccccCCC
Confidence                                      0124455589999999885  45799999999999885421 1 1112211   


Q ss_pred             -------HHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc-CC---c-cCCceEEecCCcc--cCHHHHHHHHHHHhC
Q 023110          171 -------LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG-NE---K-ASRQVFNISGEKY--VTFDGLARACAKAAG  235 (287)
Q Consensus       171 -------~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~-~~---~-~~~~~~~i~~~~~--~s~~e~~~~i~~~~g  235 (287)
                             .-+|.--.+..+.+...++|.+|.++.+++.+.- +.   . ....+||++++..  ++|.++.+...+...
T Consensus       254 p~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~  332 (467)
T KOG1221|consen  254 PDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFE  332 (467)
T ss_pred             CceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhcc
Confidence                   1122222234577888999999999999886651 11   1 1245999998644  899999999888875

>PRK06182 short chain dehydrogenase; Validated

Probab=99.64  E-value=4.1e-15  Score=122.72  Aligned_cols=194  Identities=16%  Similarity=0.135  Sum_probs=124.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|++|++++++|+++|++|++++|+.....+ +.          ..+++++.+|+.|.+++.++++..     ++|+
T Consensus         9 tGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~-~~----------~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          9 TGASSGIGKATARRLAAQGYTVYGAARRVDKMED-LA----------SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----------hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998765321 11          236889999999999988887632     7899


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||++|....                    +    ++.+++.++  +..++|++||...+....          ....|.
T Consensus        78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~  147 (273)
T PRK06182         78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTP----------LGAWYH  147 (273)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCC----------CccHhH
Confidence            9999986321                    1    344555554  557899999965321110          111244


Q ss_pred             hhhHHHHHHh-------hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCc--------cCCCCCCceeeeeeHHH
Q 023110          130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI--------PIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       130 ~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~D  194 (287)
                      .+|...+.+.       ...+++++++|||.+.++.... ....+... ..+...        ...........+.+.+|
T Consensus       148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (273)
T PRK06182        148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDI-AADHLLKT-SGNGAYAEQAQAVAASMRSTYGSGRLSDPSV  225 (273)
T ss_pred             HHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchh-hhhhhccc-ccccchHHHHHHHHHHHHHhhccccCCCHHH
Confidence            8888888654       2458999999999998874210 00000000 000000        00001111234568999


Q ss_pred             HHHHHHHHHcCCccCCceEEecCC
Q 023110          195 LARAFVQVLGNEKASRQVFNISGE  218 (287)
Q Consensus       195 ~a~~~~~~~~~~~~~~~~~~i~~~  218 (287)
                      +|++++.++.... ....|+++.+
T Consensus       226 vA~~i~~~~~~~~-~~~~~~~g~~  248 (273)
T PRK06182        226 IADAISKAVTARR-PKTRYAVGFG  248 (273)
T ss_pred             HHHHHHHHHhCCC-CCceeecCcc
Confidence            9999999987654 2346776654

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.2e-14  Score=118.16  Aligned_cols=195  Identities=16%  Similarity=0.208  Sum_probs=125.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||++++++|+++|++|+++.|......+...+. ..........+.++.+|+.+.+++.++++.     .++|.
T Consensus        12 tGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   90 (249)
T PRK12827         12 TGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAV-AAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLDI   90 (249)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHH-HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999887543311111100 011111234688999999999988887753     36899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhCC-------CCccEEEEecceeeccCCCCCCCCCCCCCCCc-
Q 023110           76 VYDINGREA--------------------DEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-  127 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-  127 (287)
                      |||++|...                    .++..+++++.       +.+++|++||...+....           +.. 
T Consensus        91 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~  159 (249)
T PRK12827         91 LVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNR-----------GQVN  159 (249)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCC-----------CCch
Confidence            999998632                    12333444421       457899999977653211           122 


Q ss_pred             chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      |..+|...+.+++       ..+++++++|||.+.++.....+..   .......+.         ..+.+.+|+|+++.
T Consensus       160 y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---~~~~~~~~~---------~~~~~~~~va~~~~  227 (249)
T PRK12827        160 YAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT---EHLLNPVPV---------QRLGEPDEVAALVA  227 (249)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH---HHHHhhCCC---------cCCcCHHHHHHHHH
Confidence            3488887665542       2489999999999999854332211   122222111         12346899999999


Q ss_pred             HHHcCCc--cCCceEEecCCc
Q 023110          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (287)
                      .++....  .+|+.+++.++.
T Consensus       228 ~l~~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        228 FLVSDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             HHcCcccCCccCcEEEeCCCC
Confidence            9886532  257788887653

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.63  E-value=7.7e-15  Score=119.47  Aligned_cols=195  Identities=17%  Similarity=0.203  Sum_probs=125.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEE-EcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|+++|++|+++ .|+.....+..     ........++.++.+|+.|++++..++++.     .+|
T Consensus        10 tGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (250)
T PRK08063         10 TGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETA-----EEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLD   84 (250)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999998874 66654321111     011111346888999999999988887743     689


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc-
Q 023110           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-  127 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-  127 (287)
                      +|||+++...                    .++..++++    +.  +.++||++||...+..           ..+.. 
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~~~  153 (250)
T PRK08063         85 VFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY-----------LENYTT  153 (250)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----------CCCccH
Confidence            9999998521                    112223333    32  4569999999665321           11222 


Q ss_pred             chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      |..+|..+|.+.+       ..++++++++||.+..+.... .....+........+         ...+++.+|+|+++
T Consensus       154 y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~  224 (250)
T PRK08063        154 VGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTP---------AGRMVEPEDVANAV  224 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCC---------CCCCcCHHHHHHHH
Confidence            3489999988763       357999999999997764211 000111111111110         11368899999999


Q ss_pred             HHHHcCCc--cCCceEEecCCcc
Q 023110          200 VQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      +.++..+.  ..|+.+++.++..
T Consensus       225 ~~~~~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        225 LFLCSPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             HHHcCchhcCccCCEEEECCCee
Confidence            99987643  2578888888754

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.63  E-value=2.2e-14  Score=119.24  Aligned_cols=196  Identities=19%  Similarity=0.225  Sum_probs=128.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||.+++++|+++|++|++++|+.......+.    ..+......+.++.+|+.+.+.+.++++.     .++|+
T Consensus        52 tGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~  127 (290)
T PRK06701         52 TGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETK----QRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDI  127 (290)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997643211111    11111124578899999999988887764     26899


Q ss_pred             EEecCCCCc---------------------ccHHHHHHhC----CCCccEEEEecceeeccCCCCCCCCCCCCCCCcchh
Q 023110           76 VYDINGREA---------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~ll~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  130 (287)
                      |||+++...                     .+..++++++    +...++|++||...|.....          ...|..
T Consensus       128 lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~----------~~~Y~~  197 (290)
T PRK06701        128 LVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET----------LIDYSA  197 (290)
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC----------cchhHH
Confidence            999998621                     1233344443    23358999999887643221          112448


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      +|...+.+++       ..+++++.++||.++.+................         ......+.+.+|+|++++.++
T Consensus       198 sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~ll  268 (290)
T PRK06701        198 TKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGS---------NTPMQRPGQPEELAPAYVFLA  268 (290)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHh---------cCCcCCCcCHHHHHHHHHHHc
Confidence            8888776653       348999999999998874322111111111111         111234678999999999998


Q ss_pred             cCCc--cCCceEEecCCc
Q 023110          204 GNEK--ASRQVFNISGEK  219 (287)
Q Consensus       204 ~~~~--~~~~~~~i~~~~  219 (287)
                      ....  ..|..+++.++.
T Consensus       269 ~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        269 SPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             CcccCCccCcEEEeCCCc
Confidence            7642  367888888764

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.63  E-value=1.3e-14  Score=117.92  Aligned_cols=195  Identities=20%  Similarity=0.182  Sum_probs=123.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||.+++++|+++|++|+...++.........    ..+......+.++.+|+.|.+++.++++..     .+|+
T Consensus         8 tG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06123          8 TGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVV----QAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDA   83 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHH----HHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999998877654322111110    111111245778999999999888887632     5899


Q ss_pred             EEecCCCCcc---------------------cHHHHHHhCC-----C----CccEEEEeccee-eccCCCCCCCCCCCCC
Q 023110           76 VYDINGREAD---------------------EVEPILDALP-----N----LEQFIYCSSAGV-YLKSDLLPHCETDTVD  124 (287)
Q Consensus        76 vi~~a~~~~~---------------------~~~~ll~~~~-----~----~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~  124 (287)
                      |||+++....                     ++.++++++.     .    ..++|++||... ++....          
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~----------  153 (248)
T PRK06123         84 LVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGE----------  153 (248)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCC----------
Confidence            9999986421                     1222333321     1    236899999754 332110          


Q ss_pred             CCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ...|..+|...|.+++       ..+++++++||+.+++|.......+..........++..         ..+++|+++
T Consensus       154 ~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~---------~~~~~d~a~  224 (248)
T PRK06123        154 YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGR---------GGTAEEVAR  224 (248)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCC---------CcCHHHHHH
Confidence            1125589998887653       348999999999999985322222222322322222211         135899999


Q ss_pred             HHHHHHcCCc--cCCceEEecCC
Q 023110          198 AFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~  218 (287)
                      +++.++....  ..|+.|++.++
T Consensus       225 ~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        225 AILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHHHHhCccccCccCCEEeecCC
Confidence            9999887542  36788998775

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.63  E-value=4.8e-15  Score=121.64  Aligned_cols=199  Identities=18%  Similarity=0.178  Sum_probs=124.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|++|++++++|+++|++|++++|+.+.......     ...  ...+.++.+|+.|++++..+++.     .++|+
T Consensus        17 tGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (264)
T PRK12829         17 TGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAA-----RLP--GAKVTATVADVADPAQVERVFDTAVERFGGLDV   89 (264)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHh--cCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654221110     000  11568899999999988887764     27899


Q ss_pred             EEecCCCC-c--------------------ccHHHHHHh----CC--CC-ccEEEEecceeeccCCCCCCCCCCCCCCC-
Q 023110           76 VYDINGRE-A--------------------DEVEPILDA----LP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPK-  126 (287)
Q Consensus        76 vi~~a~~~-~--------------------~~~~~ll~~----~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~-  126 (287)
                      |||+++.. .                    .++..++++    +.  +. ++++++||.......           .+. 
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~-----------~~~~  158 (264)
T PRK12829         90 LVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY-----------PGRT  158 (264)
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCC-----------CCCc
Confidence            99999864 1                    112233333    23  33 568888775432111           111 


Q ss_pred             cchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccC----CCCCCceeeeeeHHHH
Q 023110          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI----PGSGIQVTQLGHVKDL  195 (287)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~D~  195 (287)
                      .|..+|...|.+++       ..+++++++|||.+++|.... ........  .+.....    .........+++++|+
T Consensus       159 ~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~  235 (264)
T PRK12829        159 PYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRR-VIEARAQQ--LGIGLDEMEQEYLEKISLGRMVEPEDI  235 (264)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHH-Hhhhhhhc--cCCChhHHHHHHHhcCCCCCCCCHHHH
Confidence            24488888777653       248999999999999985211 11100000  0000000    0000112247999999


Q ss_pred             HHHHHHHHcCC--ccCCceEEecCCcc
Q 023110          196 ARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      |+++..++...  ..+++.|++.++..
T Consensus       236 a~~~~~l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        236 AATALFLASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             HHHHHHHcCccccCccCcEEEeCCCcc
Confidence            99998888642  33688999988753

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.61  E-value=8e-15  Score=117.54  Aligned_cols=182  Identities=16%  Similarity=0.149  Sum_probs=122.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|++|+++++.|+++ ++|++++|+...... +        .....+++++++|+.|.+++.++++.. ++|+|||+
T Consensus         9 tG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~-~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          9 TGASRGIGAAIARELAPT-HTLLLGGRPAERLDE-L--------AAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             ecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHH-H--------HHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            699999999999999999 999999998654211 1        111236889999999999999988743 59999999


Q ss_pred             CCCCcc--------------------c----HHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHH
Q 023110           80 NGREAD--------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLN  134 (287)
Q Consensus        80 a~~~~~--------------------~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~  134 (287)
                      ++....                    +    +.+++++++ ..+++|++||...++....          ...|..+|..
T Consensus        79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~----------~~~y~~~K~a  148 (227)
T PRK08219         79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPG----------WGSYAASKFA  148 (227)
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCC----------CchHHHHHHH
Confidence            986321                    0    334555554 5678999999876542211          1123478887


Q ss_pred             HHHHhhh-----CC-CcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCcc
Q 023110          135 TESVLES-----KG-VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       135 ~E~~~~~-----~~-~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (287)
                      ++.+++.     .. +++..++||.+.++..     ..+...  .+...       ....+++++|+|++++.+++++. 
T Consensus       149 ~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~-----~~~~~~--~~~~~-------~~~~~~~~~dva~~~~~~l~~~~-  213 (227)
T PRK08219        149 LRALADALREEEPGNVRVTSVHPGRTDTDMQ-----RGLVAQ--EGGEY-------DPERYLRPETVAKAVRFAVDAPP-  213 (227)
T ss_pred             HHHHHHHHHHHhcCCceEEEEecCCccchHh-----hhhhhh--hcccc-------CCCCCCCHHHHHHHHHHHHcCCC-
Confidence            7765531     24 8888899887665421     111100  11111       12357999999999999998765 


Q ss_pred             CCceEEecC
Q 023110          209 SRQVFNISG  217 (287)
Q Consensus       209 ~~~~~~i~~  217 (287)
                      .+.++++.-
T Consensus       214 ~~~~~~~~~  222 (227)
T PRK08219        214 DAHITEVVV  222 (227)
T ss_pred             CCccceEEE
Confidence            456666654

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.61  E-value=7.2e-15  Score=119.41  Aligned_cols=195  Identities=17%  Similarity=0.190  Sum_probs=125.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||++++++|+++|++|+++.+......+.+.    ..+.....++.++.+|+.+++++.+++++     ..+|+
T Consensus        12 tG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (247)
T PRK12935         12 TGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLV----NELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDI   87 (247)
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHH----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999876654322111110    11111124688899999999999888874     25899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhCC------CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+++...                    .++..+++++.      +..++|++||...+....          ....|.
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~  157 (247)
T PRK12935         88 LVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGF----------GQTNYS  157 (247)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCC----------CCcchH
Confidence            999998732                    11233344431      346899999965432111          111244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+++       ..++++++++||.+.++.... ............         .....+.+++|++++++.+
T Consensus       158 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~---------~~~~~~~~~edva~~~~~~  227 (247)
T PRK12935        158 AAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE-VPEEVRQKIVAK---------IPKKRFGQADEIAKGVVYL  227 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh-ccHHHHHHHHHh---------CCCCCCcCHHHHHHHHHHH
Confidence            88887766542       348999999999997763211 111111111111         1234578999999999999


Q ss_pred             HcCCc-cCCceEEecCCc
Q 023110          203 LGNEK-ASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~~-~~~~~~~i~~~~  219 (287)
                      ++... ..++.|++.++.
T Consensus       228 ~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        228 CRDGAYITGQQLNINGGL  245 (247)
T ss_pred             cCcccCccCCEEEeCCCc
Confidence            86542 368899999864

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.3e-14  Score=118.75  Aligned_cols=194  Identities=15%  Similarity=0.156  Sum_probs=124.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+...... +.    ..+.....++.++.+|+.|.+++..+++..     ++|+
T Consensus        11 tGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   85 (258)
T PRK07890         11 SGVGPGLGRTLAVRAARAGADVVLAARTAERLDE-VA----AEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDA   85 (258)
T ss_pred             ECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH----HHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccE
Confidence            7999999999999999999999999998654221 11    111111246789999999999888777642     6899


Q ss_pred             EEecCCCCcc---------------------cHHHHHHhC----C-CCccEEEEecceeeccCCCCCCCCCCCCCCCc-c
Q 023110           76 VYDINGREAD---------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-R  128 (287)
Q Consensus        76 vi~~a~~~~~---------------------~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~  128 (287)
                      |||+++....                     +...+++++    . ...++|++||...+...           .+.. |
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~~~~Y  154 (258)
T PRK07890         86 LVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQ-----------PKYGAY  154 (258)
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCC-----------CCcchh
Confidence            9999985211                     122334443    2 33589999997653211           1122 3


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh----------hHHHHHHHHcCCCccCCCCCCceeeeee
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                      ..+|...+.+++       ..++++++++||.+++|.....+          .........+.         .....+.+
T Consensus       155 ~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~  225 (258)
T PRK07890        155 KMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN---------SDLKRLPT  225 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc---------CCccccCC
Confidence            488888877663       24799999999999998421100          00111111111         11223677


Q ss_pred             HHHHHHHHHHHHcCC--ccCCceEEecCCc
Q 023110          192 VKDLARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      ++|+|++++.+++..  ...|+.+.+.++.
T Consensus       226 ~~dva~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        226 DDEVASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             HHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence            899999998888642  2356666666653

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.61  E-value=7e-14  Score=112.67  Aligned_cols=183  Identities=21%  Similarity=0.235  Sum_probs=122.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc----CCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~----~~~d~v   76 (287)
                      |||+|++|++++++|+++|++|++++|+....                ...+++.+|+.+.+++.++++.    .++|+|
T Consensus         9 tG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~v   72 (234)
T PRK07577          9 TGATKGIGLALSLRLANLGHQVIGIARSAIDD----------------FPGELFACDLADIEQTAATLAQINEIHPVDAI   72 (234)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEE
Confidence            69999999999999999999999999986541                1225789999999887776653    368999


Q ss_pred             EecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchh
Q 023110           77 YDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (287)
Q Consensus        77 i~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  130 (287)
                      ||+++....                    +    ...++.+++  +..++|++||...|+...           ...|..
T Consensus        73 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~Y~~  141 (234)
T PRK07577         73 VNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALD-----------RTSYSA  141 (234)
T ss_pred             EECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCC-----------chHHHH
Confidence            999986311                    1    223344443  567999999987664321           122448


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC--ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      +|...|.+.+       ..+++++++|||.+..+....  ..............+.         ......+|+|.+++.
T Consensus       142 sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~  212 (234)
T PRK07577        142 AKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPM---------RRLGTPEEVAAAIAF  212 (234)
T ss_pred             HHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCC---------CCCcCHHHHHHHHHH
Confidence            8888776653       358999999999998764211  1011111111111111         123468999999999


Q ss_pred             HHcCCc--cCCceEEecCCc
Q 023110          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++..+.  ..|+.+.+.++.
T Consensus       213 l~~~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        213 LLSDDAGFITGQVLGVDGGG  232 (234)
T ss_pred             HhCcccCCccceEEEecCCc
Confidence            987542  357788887654

>PRK06194 hypothetical protein; Provisional

Probab=99.61  E-value=2.5e-14  Score=118.86  Aligned_cols=196  Identities=15%  Similarity=0.144  Sum_probs=127.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.........     .+.....++.++.+|+.|.+++.++++..     ++|+
T Consensus        12 tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   86 (287)
T PRK06194         12 TGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVA-----ELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHL   86 (287)
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-----HHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997654221111     11111235778999999999998887632     5899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--C------CccEEEEecceeeccCCCCCCCCCCCC
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--N------LEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~------~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (287)
                      |||+||...                    .++.+++++    +.  .      ..++|++||...+....          
T Consensus        87 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------  156 (287)
T PRK06194         87 LFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP----------  156 (287)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC----------
Confidence            999998732                    112222222    22  2      15899999987653221          


Q ss_pred             CCCc-chhhhHHHHHHhh----h-----CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHH
Q 023110          124 DPKS-RHKGKLNTESVLE----S-----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       124 ~~~~-~~~~k~~~E~~~~----~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                       +.. |..+|...|.+++    +     .++++..+.||.+..+          +.....+++..+.+++.+.+++++++
T Consensus       157 -~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~----------~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (287)
T PRK06194        157 -AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG----------IWQSERNRPADLANTAPPTRSQLIAQ  225 (287)
T ss_pred             -CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc----------cccccccCchhcccCccccchhhHHH
Confidence             122 4489998887763    2     2355566666655333          11222344555667777888899999


Q ss_pred             HHHHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHHHHhCCCC
Q 023110          194 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       194 D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  238 (287)
                      |.+..+....                .++..|+++.+.+.+....
T Consensus       226 ~~~~~~~~~~----------------~~s~~dva~~i~~~~~~~~  254 (287)
T PRK06194        226 AMSQKAVGSG----------------KVTAEEVAQLVFDAIRAGR  254 (287)
T ss_pred             HHHHhhhhcc----------------CCCHHHHHHHHHHHHHcCC
Confidence            8887653221                1788999999998776443

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.61  E-value=3.7e-14  Score=115.40  Aligned_cols=195  Identities=18%  Similarity=0.193  Sum_probs=126.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+........     ..+.+...++.++.+|+.+.+++.++++.     ..+|+
T Consensus         9 tGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~   83 (250)
T TIGR03206         9 TGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVA-----ADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDV   83 (250)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     11111134688999999999988887763     25899


Q ss_pred             EEecCCCCc--------------------ccHHHH----HHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l----l~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+++...                    .+...+    ++.++  +..++|++||...+.....          ...|.
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~----------~~~Y~  153 (250)
T TIGR03206        84 LVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG----------EAVYA  153 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC----------CchHH
Confidence            999998521                    112233    33333  5678999999877643221          11244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC----h-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP----V-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      .+|...+.+++       ..+++++++|||.++++.....    . ...+........+.         ..+...+|+|+
T Consensus       154 ~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~  224 (250)
T TIGR03206       154 ACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL---------GRLGQPDDLPG  224 (250)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc---------cCCcCHHHHHH
Confidence            88877666553       2479999999999988731100    0 01111121211111         12456799999


Q ss_pred             HHHHHHcCCc--cCCceEEecCCc
Q 023110          198 AFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++..++....  ..|+.+++.++.
T Consensus       225 ~~~~l~~~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       225 AILFFSSDDASFITGQVLSVSGGL  248 (250)
T ss_pred             HHHHHcCcccCCCcCcEEEeCCCc
Confidence            9999886543  257889888763

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.61  E-value=3.8e-14  Score=115.07  Aligned_cols=194  Identities=20%  Similarity=0.255  Sum_probs=124.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||||++|+++++.|+++|++|+++.|+.........    ..+......+.++.+|+.+.+++.+++++     .++|+
T Consensus        11 tG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (248)
T PRK05557         11 TGASRGIGRAIAERLAAQGANVVINYASSEAGAEALV----AEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDI   86 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999898887653111110    01111135688899999999988887763     26899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhCC------CCccEEEEeccee-eccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEPILDALP------NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~~------~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||+++...                    .++.++++++.      +.++||++||... ++...           ...|
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~-----------~~~y  155 (248)
T PRK05557         87 LVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPG-----------QANY  155 (248)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCC-----------Cchh
Confidence            999998621                    12333444432      4568999998643 33211           1123


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      ..+|...+.+++       ..++++++++||.+.++... ..............+.         ..+.+.+|+++++..
T Consensus       156 ~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~  225 (248)
T PRK05557        156 AASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTD-ALPEDVKEAILAQIPL---------GRLGQPEEIASAVAF  225 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccc-ccChHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence            478887775542       35799999999988665321 1222222222222211         135688999999988


Q ss_pred             HHcC--CccCCceEEecCCc
Q 023110          202 VLGN--EKASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~--~~~~~~~~~i~~~~  219 (287)
                      ++..  ...+++.|+++++.
T Consensus       226 l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        226 LASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             HcCcccCCccccEEEecCCc
Confidence            8765  33467899998764

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.1e-14  Score=118.25  Aligned_cols=190  Identities=17%  Similarity=0.205  Sum_probs=126.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|++|+++++.|.++|++|++++|+.+...+...          ..+..++.+|+.+.+.+..+++.. .+|+|||+
T Consensus        15 tGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~   84 (245)
T PRK07060         15 TGASSGIGRACAVALAQRGARVVAAARNAAALDRLAG----------ETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC   84 (245)
T ss_pred             eCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------HhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence            6999999999999999999999999998654211110          124678899999999888888743 48999999


Q ss_pred             CCCCc--------------------ccHHHHHHhCC------C-CccEEEEecceeeccCCCCCCCCCCCCCCCcchhhh
Q 023110           80 NGREA--------------------DEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (287)
Q Consensus        80 a~~~~--------------------~~~~~ll~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k  132 (287)
                      ++...                    .+..++++++.      + ..+||++||...+....          ....|..+|
T Consensus        85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~y~~sK  154 (245)
T PRK07060         85 AGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP----------DHLAYCASK  154 (245)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC----------CCcHhHHHH
Confidence            98631                    12233444332      1 36899999977653211          112244889


Q ss_pred             HHHHHHhh-------hCCCcEEEEecCeeecCCCCCChh-HHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      ..+|.+++       ..+++++.+|||.++++.....+. ..........  .       ....+++.+|+|+++..++.
T Consensus       155 ~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~d~a~~~~~l~~  225 (245)
T PRK07060        155 AALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAA--I-------PLGRFAEVDDVAAPILFLLS  225 (245)
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhc--C-------CCCCCCCHHHHHHHHHHHcC
Confidence            98887653       247999999999999885221110 1111111111  1       12347899999999999997


Q ss_pred             CCc--cCCceEEecCCc
Q 023110          205 NEK--ASRQVFNISGEK  219 (287)
Q Consensus       205 ~~~--~~~~~~~i~~~~  219 (287)
                      .+.  .+|+.+++.++.
T Consensus       226 ~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        226 DAASMVSGVSLPVDGGY  242 (245)
T ss_pred             cccCCccCcEEeECCCc
Confidence            643  257888887764

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.61  E-value=2.4e-14  Score=118.17  Aligned_cols=211  Identities=14%  Similarity=0.116  Sum_probs=130.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|.++|++|++.+|+.+...+..     ..+......+.++.+|+.|.+++.++++..     .+|+
T Consensus        12 TGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   86 (275)
T PRK05876         12 TGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAV-----NHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDV   86 (275)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865432111     111111235788999999999998887642     5899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----C--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||++|...                    .+...+++++    .  + ..++|++||...+...           .+...
T Consensus        87 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~-----------~~~~~  155 (275)
T PRK05876         87 VFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN-----------AGLGA  155 (275)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC-----------CCCch
Confidence            999998621                    1223333332    2  2 4689999998765321           12233


Q ss_pred             h-hhhHHHH----HHh---hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 H-KGKLNTE----SVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E----~~~---~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      | .+|..++    .+.   ...++++++++||.+.++..... .................+.....+++++++|+|+.++
T Consensus       156 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (275)
T PRK05876        156 YGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANS-ERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTA  234 (275)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccch-hhhcCccccccccccccccccccccCCCHHHHHHHHH
Confidence            4 8888644    333   23589999999999887642110 0000000000011112233334567899999999999


Q ss_pred             HHHcCCccCCceEEecCCcccCHHHHHHHHHHHh
Q 023110          201 QVLGNEKASRQVFNISGEKYVTFDGLARACAKAA  234 (287)
Q Consensus       201 ~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~  234 (287)
                      ..+.++    +.|.+.+  +.....+.+...+..
T Consensus       235 ~ai~~~----~~~~~~~--~~~~~~~~~~~~~~~  262 (275)
T PRK05876        235 DAILAN----RLYVLPH--AASRASIRRRFERID  262 (275)
T ss_pred             HHHHcC----CeEEecC--hhhHHHHHHHHHHHH
Confidence            999765    3455543  244555555554443

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.60  E-value=2.2e-14  Score=116.86  Aligned_cols=193  Identities=15%  Similarity=0.088  Sum_probs=123.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|++|++++++|+++|++|++++|+...   ..           ...+.++++|+.+.+++.++++.     ..+|+
T Consensus        14 tGas~~iG~~la~~l~~~G~~v~~~~~~~~~---~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (252)
T PRK08220         14 TGAAQGIGYAVALAFVEAGAKVIGFDQAFLT---QE-----------DYPFATFVLDVSDAAAVAQVCQRLLAETGPLDV   79 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecchhh---hc-----------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998611   00           24688899999999999888763     24899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCc-c
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-R  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~  128 (287)
                      |||+++...                    .+...+++++    .  +..++|++||......           ..+.. |
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~-----------~~~~~~Y  148 (252)
T PRK08220         80 LVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP-----------RIGMAAY  148 (252)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC-----------CCCCchh
Confidence            999998631                    1122344443    2  4458999999754321           11223 3


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHH-HHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF-HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      ..+|...|.+++       ..++++++++||.++++.....+..... .....+. ............+++++|+|++++
T Consensus       149 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~dva~~~~  227 (252)
T PRK08220        149 GASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGF-PEQFKLGIPLGKIARPQEIANAVL  227 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhH-HHHHhhcCCCcccCCHHHHHHHHH
Confidence            488888887663       3689999999999998842110000000 0000000 000001111235788999999999


Q ss_pred             HHHcCC--ccCCceEEecCCc
Q 023110          201 QVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~  219 (287)
                      .++...  ...++.+.+.++.
T Consensus       228 ~l~~~~~~~~~g~~i~~~gg~  248 (252)
T PRK08220        228 FLASDLASHITLQDIVVDGGA  248 (252)
T ss_pred             HHhcchhcCccCcEEEECCCe
Confidence            998643  2356677776654

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.59  E-value=2.7e-14  Score=117.15  Aligned_cols=182  Identities=19%  Similarity=0.239  Sum_probs=120.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|++|+++++.|+++|++|++++|+........     ..+.....++.++.+|+.|.+.+..+++..     ++|+
T Consensus         7 tGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          7 TGASEGIGRALAVRLARAGAQLVLAARNETRLASLA-----QELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             ecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     111111346888999999999888877643     6899


Q ss_pred             EEecCCCCc---------------------ccHHHHHHhC----C-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA---------------------DEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+++...                     .++.++++.+    . +..++|++||...+....          ....|.
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~  151 (263)
T PRK06181         82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVP----------TRSGYA  151 (263)
T ss_pred             EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCC----------CccHHH
Confidence            999988621                     1122334443    2 457899999977653211          112244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...|.+.+       ..++++++++||.+..+....     ...  ..+.+..  ..+.....+++++|+|+++..+
T Consensus       152 ~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~-----~~~--~~~~~~~--~~~~~~~~~~~~~dva~~i~~~  222 (263)
T PRK06181        152 ASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKR-----ALD--GDGKPLG--KSPMQESKIMSAEECAEAILPA  222 (263)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchh-----hcc--ccccccc--cccccccCCCCHHHHHHHHHHH
Confidence            88988887653       358999999999987763211     000  0111111  1122234789999999999999


Q ss_pred             HcCC
Q 023110          203 LGNE  206 (287)
Q Consensus       203 ~~~~  206 (287)
                      +...
T Consensus       223 ~~~~  226 (263)
T PRK06181        223 IARR  226 (263)
T ss_pred             hhCC
Confidence            9754

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.59  E-value=8e-14  Score=113.09  Aligned_cols=195  Identities=21%  Similarity=0.264  Sum_probs=123.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|.++|++|+++.|+.......+.    ..+.....++.++.+|+.+.+++.++++..     ++|+
T Consensus        11 tG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (245)
T PRK12937         11 TGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELV----AEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDV   86 (245)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHH----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988876543211111    111112356889999999999888887742     6899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----CCCccEEEEecceeeccCCCCCCCCCCCCCCCcchhh
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  131 (287)
                      |||++|...                    .+...+++++    ....++|++||...+....          ....|..+
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------~~~~Y~~s  156 (245)
T PRK12937         87 LVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLP----------GYGPYAAS  156 (245)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCC----------CCchhHHH
Confidence            999998631                    1122333332    2335899999866532111          11124488


Q ss_pred             hHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      |..++.+++       ..++.+++++||.+-++.............+....+..         -+.+.+|+++++..++.
T Consensus       157 K~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~a~~~~~l~~  227 (245)
T PRK12937        157 KAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLE---------RLGTPEEIAAAVAFLAG  227 (245)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCC---------CCCCHHHHHHHHHHHcC
Confidence            988887663       24789999999988765311111112223332222221         23467999999999886


Q ss_pred             CCc--cCCceEEecCC
Q 023110          205 NEK--ASRQVFNISGE  218 (287)
Q Consensus       205 ~~~--~~~~~~~i~~~  218 (287)
                      ...  ..|+.+++.++
T Consensus       228 ~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        228 PDGAWVNGQVLRVNGG  243 (245)
T ss_pred             ccccCccccEEEeCCC
Confidence            543  25778887764

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.59  E-value=4e-14  Score=113.76  Aligned_cols=195  Identities=18%  Similarity=0.195  Sum_probs=127.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|++|++++++|+++|++|++++|+.........     .+. ...+++++.+|+.|.+++.++++.. .+|++||+
T Consensus         3 tGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~   76 (230)
T PRK07041          3 VGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAAR-----ALG-GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT   76 (230)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHh-cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence            7999999999999999999999999998654221110     000 0246889999999999999998754 47999999


Q ss_pred             CCCCcc--------------------cHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHH
Q 023110           80 NGREAD--------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        80 a~~~~~--------------------~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E  136 (287)
                      ++....                    +...+.++..  +..++|++||...+...           .+...| .+|..++
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~-----------~~~~~Y~~sK~a~~  145 (230)
T PRK07041         77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPS-----------ASGVLQGAINAALE  145 (230)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCC-----------CcchHHHHHHHHHH
Confidence            986321                    1223444322  55799999998775421           122234 8899888


Q ss_pred             HHhhh-----CCCcEEEEecCeeecCCCCC---ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCcc
Q 023110          137 SVLES-----KGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       137 ~~~~~-----~~~~~~ilR~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (287)
                      .+.+.     .+++++.++||.+-++....   .....+........+.         ..+...+|+|+++..++.....
T Consensus       146 ~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~  216 (230)
T PRK07041        146 ALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA---------RRVGQPEDVANAILFLAANGFT  216 (230)
T ss_pred             HHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhcCCCc
Confidence            77643     24778888888775542100   0001111112111111         1134579999999999987655


Q ss_pred             CCceEEecCCccc
Q 023110          209 SRQVFNISGEKYV  221 (287)
Q Consensus       209 ~~~~~~i~~~~~~  221 (287)
                      .|+.|++.++..+
T Consensus       217 ~G~~~~v~gg~~~  229 (230)
T PRK07041        217 TGSTVLVDGGHAI  229 (230)
T ss_pred             CCcEEEeCCCeec
Confidence            7889999887643

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.59  E-value=8.4e-14  Score=112.50  Aligned_cols=193  Identities=20%  Similarity=0.248  Sum_probs=123.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      ||++|++|++++++|+++|++|++++|+.......+.    ..+......+.++.+|+.|.+++.+++++.     .+|+
T Consensus         4 tG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         4 TGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVV----EELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6999999999999999999999999987632111110    111111235789999999999888877632     5799


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhCC------CCccEEEEecce-eeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEPILDALP------NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~~------~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||+++...                    .++..+++++.      +..+|+++||.. +++...           ...|
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~-----------~~~y  148 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG-----------QANY  148 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC-----------Cchh
Confidence            999998632                    11333444432      456899999964 443211           1224


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      ..+|...+.+.+       ..++.++++|||.+.++... ..............+.         .-+.+.+|+++++..
T Consensus       149 ~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~  218 (239)
T TIGR01830       149 AASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD-KLSEKVKKKILSQIPL---------GRFGTPEEVANAVAF  218 (239)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh-hcChHHHHHHHhcCCc---------CCCcCHHHHHHHHHH
Confidence            477876665442       35899999999988665321 1112222222222221         124568999999998


Q ss_pred             HHcCC--ccCCceEEecCC
Q 023110          202 VLGNE--KASRQVFNISGE  218 (287)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~  218 (287)
                      ++...  ...++.|++.++
T Consensus       219 ~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       219 LASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HhCcccCCcCCCEEEeCCC
Confidence            88543  336789998765

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.59  E-value=9.3e-14  Score=113.71  Aligned_cols=196  Identities=16%  Similarity=0.190  Sum_probs=126.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||.++++.|+++|++|++++|+.........     .+......+.++.+|+.|++++.+++++     ..+|+
T Consensus        18 tGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~   92 (259)
T PRK08213         18 TGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAA-----HLEALGIDALWIAADVADEADIERLAEETLERFGHVDI   92 (259)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6999999999999999999999999998654211110     1111124677899999999988776653     26899


Q ss_pred             EEecCCCC--------------------cccHHHHHHhC-----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGRE--------------------ADEVEPILDAL-----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~--------------------~~~~~~ll~~~-----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||+++..                    ..++.++++++     .  +..+||++||...+......       ..+...
T Consensus        93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-------~~~~~~  165 (259)
T PRK08213         93 LVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-------VMDTIA  165 (259)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-------ccCcch
Confidence            99999852                    12233455543     2  45689999997654322110       012233


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      | .+|..+|.+++       ..++++.+++|+.+-.+... ...+.+........++..         +...+|+++++.
T Consensus       166 Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~va~~~~  235 (259)
T PRK08213        166 YNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR-GTLERLGEDLLAHTPLGR---------LGDDEDLKGAAL  235 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh-hhhHHHHHHHHhcCCCCC---------CcCHHHHHHHHH
Confidence            4 88998887764       24789999999988665322 123333333333333222         234799999888


Q ss_pred             HHHcCC--ccCCceEEecCC
Q 023110          201 QVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~  218 (287)
                      .++...  ..+|..+++.++
T Consensus       236 ~l~~~~~~~~~G~~~~~~~~  255 (259)
T PRK08213        236 LLASDASKHITGQILAVDGG  255 (259)
T ss_pred             HHhCccccCccCCEEEECCC
Confidence            887543  236778877765

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.59  E-value=1.1e-13  Score=112.71  Aligned_cols=195  Identities=15%  Similarity=0.132  Sum_probs=128.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.........     .+.....++.++.+|+.|.+++.++++.     .++|+
T Consensus        13 tGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   87 (250)
T PRK12939         13 TGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAA-----ALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDG   87 (250)
T ss_pred             eCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999988654221111     1111124688999999999998888764     26999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+++...                    .+..++++++    .  +..++|++||...+.....          ...|.
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~y~  157 (250)
T PRK12939         88 LVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPK----------LGAYV  157 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCC----------cchHH
Confidence            999998732                    1122344332    2  3458999999665422111          11244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...|.+++       ..++.++.++||.+.++.........+........         ....+++++|+|+++..+
T Consensus       158 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l  228 (250)
T PRK12939        158 ASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGR---------ALERLQVPDDVAGAVLFL  228 (250)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcC---------CCCCCCCHHHHHHHHHHH
Confidence            88888877663       35789999999988776421110001222222111         123467899999999999


Q ss_pred             HcCCc--cCCceEEecCCc
Q 023110          203 LGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~  219 (287)
                      +....  .+|+.+.+.++.
T Consensus       229 ~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        229 LSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             hCccccCccCcEEEECCCc
Confidence            97542  367888888864

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.58  E-value=8.2e-14  Score=113.15  Aligned_cols=195  Identities=19%  Similarity=0.242  Sum_probs=120.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEE-cCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d   74 (287)
                      |||+|+||++++++|+++|++|+++. |+.....+..     ..+.....++.++.+|+.|.+++.++++.     .++|
T Consensus         7 tGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          7 TGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVV-----NLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-----HHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            79999999999999999999998754 5433211111     01111124578899999999999888773     2578


Q ss_pred             EEEecCCCCcc---------------------cHHHH----HHhCC-----CCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           75 VVYDINGREAD---------------------EVEPI----LDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        75 ~vi~~a~~~~~---------------------~~~~l----l~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      +|||+++....                     ++..+    +..+.     ...+||++||...+.....         .
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~---------~  152 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG---------E  152 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC---------c
Confidence            99999986311                     11112    22211     1356999999754321110         0


Q ss_pred             CCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ...|..+|..+|.+++       ..+++++++||+.+++|.......+..........+..         -..+.+|+|+
T Consensus       153 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~dva~  223 (247)
T PRK09730        153 YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ---------RGGQPEEVAQ  223 (247)
T ss_pred             ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCC---------CCcCHHHHHH
Confidence            1124488888776653       35899999999999998532211222222222222211         1136899999


Q ss_pred             HHHHHHcCCc--cCCceEEecCC
Q 023110          198 AFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~  218 (287)
                      +++.++....  ..|+.+.+.++
T Consensus       224 ~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        224 AIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             HHHhhcChhhcCccCcEEecCCC
Confidence            9999886532  35667777664

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.58  E-value=5.1e-14  Score=116.38  Aligned_cols=135  Identities=15%  Similarity=0.223  Sum_probs=100.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC------Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~------~~d   74 (287)
                      |||+|++|+++++.|.++|++|++++|+..... .+.          ..+++++.+|+.|.+++..+++..      .+|
T Consensus        10 tGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~-~l~----------~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id   78 (277)
T PRK05993         10 TGCSSGIGAYCARALQSDGWRVFATCRKEEDVA-ALE----------AEGLEAFQLDYAEPESIAALVAQVLELSGGRLD   78 (277)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHH----------HCCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence            799999999999999999999999999865521 111          136788999999998887777632      589


Q ss_pred             EEEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc-
Q 023110           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-  127 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-  127 (287)
                      +|||++|....                    +    +..+++.+.  +..++|++||...+..           ..+.. 
T Consensus        79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  147 (277)
T PRK05993         79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP-----------MKYRGA  147 (277)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC-----------CCccch
Confidence            99999886311                    1    445666665  5679999999654321           11222 


Q ss_pred             chhhhHHHHHHhh-------hCCCcEEEEecCeeecC
Q 023110          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~  157 (287)
                      |..+|..+|.+.+       ..++++++++||.+-.+
T Consensus       148 Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~  184 (277)
T PRK05993        148 YNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR  184 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence            4489999887653       46899999999988765

>PRK08324 short chain dehydrogenase; Validated

Probab=99.57  E-value=2.5e-14  Score=131.88  Aligned_cols=204  Identities=14%  Similarity=0.122  Sum_probs=132.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|.++|++|++++|+.........     .+.. ...+.++.+|+.|.+++.++++..     ++|+
T Consensus       428 TGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~-----~l~~-~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDv  501 (681)
T PRK08324        428 TGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAA-----ELGG-PDRALGVACDVTDEAAVQAAFEEAALAFGGVDI  501 (681)
T ss_pred             ecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHH-----HHhc-cCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765321111     0000 136889999999999888877642     6899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||++|...                    .+...++++    ++  + ..+||++||...+....          ....|
T Consensus       502 vI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~----------~~~~Y  571 (681)
T PRK08324        502 VVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGP----------NFGAY  571 (681)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCC----------CcHHH
Confidence            999998531                    123344333    33  3 26899999976542211          11124


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeee-cCCCCCChhHHHHHHHHcCCCc----cCCCCCCceeeeeeHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPI----PIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~-g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~D~a  196 (287)
                      ..+|...+.+++       ..++++.+++|+.+| +.+-..... ...+....+...    ..+.++.....+++.+|+|
T Consensus       572 ~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA  650 (681)
T PRK08324        572 GAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEW-IEARAAAYGLSEEELEEFYRARNLLKREVTPEDVA  650 (681)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchh-hhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHH
Confidence            489998887764       246999999999998 543211110 000111111111    0123344456789999999


Q ss_pred             HHHHHHHc--CCccCCceEEecCCccc
Q 023110          197 RAFVQVLG--NEKASRQVFNISGEKYV  221 (287)
Q Consensus       197 ~~~~~~~~--~~~~~~~~~~i~~~~~~  221 (287)
                      +++..++.  .....|.++++.++...
T Consensus       651 ~a~~~l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        651 EAVVFLASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             HHHHHHhCccccCCcCCEEEECCCchh
Confidence            99999984  34446889999987643

>PRK06196 oxidoreductase; Provisional

Probab=99.57  E-value=1.2e-13  Score=116.29  Aligned_cols=190  Identities=20%  Similarity=0.123  Sum_probs=117.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+...+         ..++.++.+|+.|.+++.++++.     .++|+
T Consensus        32 TGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~---------l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         32 TGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAG---------IDGVEVVMLDLADLESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---------hhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence            79999999999999999999999999986543211110         12478899999999988877753     26899


Q ss_pred             EEecCCCCc------------------cc----HHHHHHhCC--CCccEEEEecceeeccC-CCCCCCCCCCCCCCcch-
Q 023110           76 VYDINGREA------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~~~~~~~~~~-  129 (287)
                      |||+||...                  .+    ++.++..+.  +..++|++||....... .........+..+...| 
T Consensus       103 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~  182 (315)
T PRK06196        103 LINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYG  182 (315)
T ss_pred             EEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHH
Confidence            999998631                  11    333444544  45799999997543211 10000111122232334 


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHH--HHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF--HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      .+|...+.+.+       ..++++++++||.+.++...........  ..+.... .++ .     ..+...+|+|.+++
T Consensus       183 ~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~-~-----~~~~~~~~~a~~~~  255 (315)
T PRK06196        183 QSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHG-NPI-D-----PGFKTPAQGAATQV  255 (315)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhh-hhh-h-----hhcCCHhHHHHHHH
Confidence            89998776542       3589999999999998853211000000  0000000 000 0     02356899999999


Q ss_pred             HHHcCC
Q 023110          201 QVLGNE  206 (287)
Q Consensus       201 ~~~~~~  206 (287)
                      .++..+
T Consensus       256 ~l~~~~  261 (315)
T PRK06196        256 WAATSP  261 (315)
T ss_pred             HHhcCC
Confidence            988654

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.57  E-value=1.7e-13  Score=111.20  Aligned_cols=197  Identities=18%  Similarity=0.232  Sum_probs=126.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|++|+++++.|.++|++|++++|+.......+.    ........++.++.+|+.+.+++.++++..     .+|+
T Consensus         8 tG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~   83 (245)
T PRK12824          8 TGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWF----EEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDI   83 (245)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHH----HHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998542111100    000001246889999999999888877632     5899


Q ss_pred             EEecCCCCc--------------------ccH----HHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+++...                    .+.    +.+++.++  +..+||++||...+.....          ...|.
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~----------~~~Y~  153 (245)
T PRK12824         84 LVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFG----------QTNYS  153 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCC----------ChHHH
Confidence            999998631                    112    22344444  5679999999776532211          11233


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+++       ..++++++++||.+.++.... .............+.         ..+...+|+++++..+
T Consensus       154 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l  223 (245)
T PRK12824        154 AAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQ-MGPEVLQSIVNQIPM---------KRLGTPEEIAAAVAFL  223 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhh-cCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHH
Confidence            88886665542       347999999999998874221 112222222222221         1244589999999888


Q ss_pred             HcCCc--cCCceEEecCCccc
Q 023110          203 LGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~~~  221 (287)
                      +....  ..|+.+++.++..+
T Consensus       224 ~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12824        224 VSEAAGFITGETISINGGLYM  244 (245)
T ss_pred             cCccccCccCcEEEECCCeec
Confidence            85432  36889999987643

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1.2e-13  Score=112.36  Aligned_cols=190  Identities=20%  Similarity=0.249  Sum_probs=120.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|++|++++++|+++|++|++++|+.....+..        .+....+.++++|+.|.+++..+++.     .++|+
T Consensus        12 tGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500         12 TGGTSGIGLETARQFLAEGARVAITGRDPASLEAAR--------AELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHH--------HHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999864422111        11124678899999998877665542     26899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----CCCccEEEEecc-eeeccCCCCCCCCCCCCCCCcchh
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----PNLEQFIYCSSA-GVYLKSDLLPHCETDTVDPKSRHK  130 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~~~~~~i~~Ss~-~v~~~~~~~~~~e~~~~~~~~~~~  130 (287)
                      |||+++...                    .++..+++++    ....++|++||. ..|+...           ...|..
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~-----------~~~Y~~  152 (249)
T PRK06500         84 VFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPN-----------SSVYAA  152 (249)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCC-----------ccHHHH
Confidence            999998621                    1233455554    233467777764 3433211           112348


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCC-----CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      +|...|.+++       ..++++.++|||.+++|...     ......+.+......++.         -+...+|+|++
T Consensus       153 sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~va~~  223 (249)
T PRK06500        153 SKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG---------RFGTPEEIAKA  223 (249)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC---------CCcCHHHHHHH
Confidence            8998887763       24899999999999987311     111122223333222221         13468999999


Q ss_pred             HHHHHcCCc--cCCceEEecCC
Q 023110          199 FVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~  218 (287)
                      +..++....  ..|..+.+.++
T Consensus       224 ~~~l~~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        224 VLYLASDESAFIVGSEIIVDGG  245 (249)
T ss_pred             HHHHcCccccCccCCeEEECCC
Confidence            999886432  24555666554

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.56  E-value=2.9e-13  Score=110.73  Aligned_cols=198  Identities=16%  Similarity=0.145  Sum_probs=125.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||++++++|+++|++|+++.+........+.    ..+......+.++.+|+.|.+++.++++.     ..+|+
T Consensus        15 tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~   90 (258)
T PRK09134         15 TGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALA----AEIRALGRRAVALQADLADEAEVRALVARASAALGPITL   90 (258)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988775432111111    01111134688899999999988887763     25899


Q ss_pred             EEecCCCC--------------------cccHHHHHHhCC------CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGRE--------------------ADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~--------------------~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||++|..                    +.++..+++++.      ...++|++||...+....          ....|.
T Consensus        91 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p----------~~~~Y~  160 (258)
T PRK09134         91 LVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNP----------DFLSYT  160 (258)
T ss_pred             EEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCC----------CchHHH
Confidence            99999862                    112333444322      235778777754432111          001244


Q ss_pred             hhhHHHHHHhhh------CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          130 KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       130 ~~k~~~E~~~~~------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      .+|..+|.+.+.      .++.++.++||.+..+....  ...+. ......+.   +      ...+++|+|++++.++
T Consensus       161 ~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~--~~~~~-~~~~~~~~---~------~~~~~~d~a~~~~~~~  228 (258)
T PRK09134        161 LSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS--PEDFA-RQHAATPL---G------RGSTPEEIAAAVRYLL  228 (258)
T ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC--hHHHH-HHHhcCCC---C------CCcCHHHHHHHHHHHh
Confidence            999888766532      24889999999887643211  11111 11111111   1      2366899999999999


Q ss_pred             cCCccCCceEEecCCcccCHH
Q 023110          204 GNEKASRQVFNISGEKYVTFD  224 (287)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s~~  224 (287)
                      +++...++.|++.++..+++.
T Consensus       229 ~~~~~~g~~~~i~gg~~~~~~  249 (258)
T PRK09134        229 DAPSVTGQMIAVDGGQHLAWL  249 (258)
T ss_pred             cCCCcCCCEEEECCCeecccc
Confidence            877667889999988766554

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.56  E-value=7e-14  Score=114.39  Aligned_cols=195  Identities=18%  Similarity=0.207  Sum_probs=126.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.+.. +..     ..+.....++.++.+|+.+.+++..++++     ..+|+
T Consensus        13 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (258)
T PRK08628         13 TGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFA-----EELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDG   86 (258)
T ss_pred             eCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            79999999999999999999999999987642 111     11111235688999999999988887764     26899


Q ss_pred             EEecCCCCc-------------------ccHHHHHHh----CC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhh
Q 023110           76 VYDINGREA-------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (287)
Q Consensus        76 vi~~a~~~~-------------------~~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  131 (287)
                      |||++|...                   .+...+.++    ++ +..++|++||...+....          ....|..+
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------~~~~Y~~s  156 (258)
T PRK08628         87 LVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQG----------GTSGYAAA  156 (258)
T ss_pred             EEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCC----------CCchhHHH
Confidence            999998531                   111223332    33 446899999976542111          11124489


Q ss_pred             hHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-----hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      |..+|.+++       ..++++..++||.+++|.....+     ...........  ++. +     ..++..+|+|+++
T Consensus       157 K~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~-~-----~~~~~~~dva~~~  228 (258)
T PRK08628        157 KGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAK--IPL-G-----HRMTTAEEIADTA  228 (258)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhc--CCc-c-----ccCCCHHHHHHHH
Confidence            998887764       34799999999999987421100     00001111111  111 1     1357789999999


Q ss_pred             HHHHcCC--ccCCceEEecCCc
Q 023110          200 VQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      ..++...  ...|+.+.+.++.
T Consensus       229 ~~l~~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        229 VFLLSERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             HHHhChhhccccCceEEecCCc
Confidence            9998654  3367788887654

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.56  E-value=5.3e-13  Score=108.92  Aligned_cols=198  Identities=13%  Similarity=0.168  Sum_probs=123.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||++++++|.++|++|++++|+.+.....+.    ..+.....++.++.+|+.|.+++.++++.     .++|+
T Consensus        14 tG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~----~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   89 (254)
T PRK06114         14 TGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETA----EHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTL   89 (254)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997643111110    11111134678899999999888887763     25799


Q ss_pred             EEecCCCCc--------------------ccH----HHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||++|...                    .+.    +.++..+.  +..++|++||...+.....        .....|.
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------~~~~~Y~  161 (254)
T PRK06114         90 AVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG--------LLQAHYN  161 (254)
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC--------CCcchHH
Confidence            999998631                    112    22333333  4568999998764321110        0012244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+.+       ..++++.+++||.+.++..................+.   +      -+...+|++.+++.+
T Consensus       162 ~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~---~------r~~~~~dva~~~~~l  232 (254)
T PRK06114        162 ASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPM---Q------RMAKVDEMVGPAVFL  232 (254)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCC---C------CCcCHHHHHHHHHHH
Confidence            88887776553       3589999999999988742211111111111111111   1      235689999999998


Q ss_pred             HcCC--ccCCceEEecCCc
Q 023110          203 LGNE--KASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~  219 (287)
                      +...  .-.|+++.+.++.
T Consensus       233 ~s~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        233 LSDAASFCTGVDLLVDGGF  251 (254)
T ss_pred             cCccccCcCCceEEECcCE
Confidence            8643  2367788777764

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.55  E-value=3.4e-13  Score=110.41  Aligned_cols=190  Identities=17%  Similarity=0.189  Sum_probs=124.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||++++++|.++|++|++++|+....   .           ...+.++++|+.|.+++.++++.     .++|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   80 (260)
T PRK06523         15 TGGTKGIGAATVARLLEAGARVVTTARSRPDD---L-----------PEGVEFVAADLTTAEGCAAVARAVLERLGGVDI   80 (260)
T ss_pred             ECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---c-----------CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986531   1           24678899999999887766542     16899


Q ss_pred             EEecCCCC----------------------cccH----HHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           76 VYDINGRE----------------------ADEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~----------------------~~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      |||++|..                      ..+.    +.+++.++  +..++|++||...+...          ..+..
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~~~~~  150 (260)
T PRK06523         81 LVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL----------PESTT  150 (260)
T ss_pred             EEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC----------CCCcc
Confidence            99999842                      1111    22334443  44689999997654221          11122


Q ss_pred             -chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHH-----------HHHHHHcC-CCccCCCCCCcee
Q 023110          128 -RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEW-----------FFHRLKAG-RPIPIPGSGIQVT  187 (287)
Q Consensus       128 -~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~~~~~~  187 (287)
                       |..+|..++.+++       ..++++.+++||.+.++.... +...           ....+... ..++       ..
T Consensus       151 ~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~  222 (260)
T PRK06523        151 AYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVA-LAERLAEAAGTDYEGAKQIIMDSLGGIP-------LG  222 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHH-HHHHHHhhcCCCHHHHHHHHHHHhccCc-------cC
Confidence             3488998887653       357999999999998874211 0000           00000000 0011       11


Q ss_pred             eeeeHHHHHHHHHHHHcCC--ccCCceEEecCCcccC
Q 023110          188 QLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (287)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (287)
                      .+...+|+|+++..++...  ...|+.+.+.++...|
T Consensus       223 ~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        223 RPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             CCCCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence            2446899999999998753  3367888888876544

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.55  E-value=3.2e-13  Score=110.29  Aligned_cols=192  Identities=16%  Similarity=0.177  Sum_probs=124.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||.+++++|+++|++|++++|+.... .....     .  ....+..+.+|+.+.+++..++++.     ++|+
T Consensus        21 tGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~-----~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         21 TGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQ-----L--LGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHH-----h--hCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            69999999999999999999999999986531 11000     0  0235678999999999888877642     6899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||++|...                    .+...+++++    .  +..++|++||........          ....|.
T Consensus        93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~  162 (255)
T PRK06841         93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALE----------RHVAYC  162 (255)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCC----------CCchHH
Confidence            999998631                    1223344432    2  457899999975421111          111244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+.+       ..++++..++||.+..+.....+...........  .+       ...+.+.+|+|++++.+
T Consensus       163 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~va~~~~~l  233 (255)
T PRK06841        163 ASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKL--IP-------AGRFAYPEEIAAAALFL  233 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhc--CC-------CCCCcCHHHHHHHHHHH
Confidence            88888776552       3579999999999977642211111111111111  11       12467899999999999


Q ss_pred             HcCCc--cCCceEEecCCc
Q 023110          203 LGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~  219 (287)
                      +....  -+|+.+.+.++.
T Consensus       234 ~~~~~~~~~G~~i~~dgg~  252 (255)
T PRK06841        234 ASDAAAMITGENLVIDGGY  252 (255)
T ss_pred             cCccccCccCCEEEECCCc
Confidence            97643  267888887765

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.55  E-value=3.2e-13  Score=110.27  Aligned_cols=190  Identities=17%  Similarity=0.214  Sum_probs=124.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|.++|++|+++.|+.....+.+.          ..++.++.+|+.|.+++.++++..     ++|+
T Consensus        13 tGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~----------~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463         13 TGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR----------EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----------hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988776543222221          125788999999999888887642     6899


Q ss_pred             EEecCCCCc--------------------cc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc-c
Q 023110           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-R  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~  128 (287)
                      |||++|...                    .+    ++.+++.++  +..++|++||...++...          .... |
T Consensus        83 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~----------~~~~~Y  152 (255)
T PRK06463         83 LVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA----------EGTTFY  152 (255)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC----------CCccHh
Confidence            999998631                    11    233445444  456999999987653211          1112 3


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC----ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ..+|...+.+.+       ..++++..++||.+-.+....    .....+........+         ...+...+|+|+
T Consensus       153 ~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~  223 (255)
T PRK06463        153 AITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV---------LKTTGKPEDIAN  223 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCC---------cCCCcCHHHHHH
Confidence            488988877653       357999999999886542110    000011111111111         123456899999


Q ss_pred             HHHHHHcCCc--cCCceEEecCCc
Q 023110          198 AFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      +++.++....  -+|..+.+.++.
T Consensus       224 ~~~~l~s~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        224 IVLFLASDDARYITGQVIVADGGR  247 (255)
T ss_pred             HHHHHcChhhcCCCCCEEEECCCe
Confidence            9999986543  367888887765

>PRK05717 oxidoreductase; Validated

Probab=99.54  E-value=2.7e-13  Score=110.71  Aligned_cols=192  Identities=16%  Similarity=0.139  Sum_probs=123.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+........        .+....+.++.+|+.+.+++..++++.     .+|+
T Consensus        16 tG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717         16 TGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVA--------KALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             eCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH--------HHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999988764421111        111246788999999998886665532     5899


Q ss_pred             EEecCCCCc----------------------ccHHHHHHhCC-----CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA----------------------DEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~----------------------~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||+++...                      .++.++++++.     ...++|++||...+....          ....|
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~----------~~~~Y  157 (255)
T PRK05717         88 LVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP----------DTEAY  157 (255)
T ss_pred             EEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC----------CCcch
Confidence            999998631                      12334555542     346899999876542211          11224


Q ss_pred             hhhhHHHHHHhh----h--CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          129 HKGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       129 ~~~k~~~E~~~~----~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      ..+|..++.+.+    +  .++++..++||.+.++.........+.... ... .+       ...+.+.+|+|.++..+
T Consensus       158 ~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~-~~~-~~-------~~~~~~~~~va~~~~~l  228 (255)
T PRK05717        158 AASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEAD-HAQ-HP-------AGRVGTVEDVAAMVAWL  228 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHH-hhc-CC-------CCCCcCHHHHHHHHHHH
Confidence            489998887663    2  258999999999988742111111111111 111 11       11356789999999888


Q ss_pred             HcCCc--cCCceEEecCCc
Q 023110          203 LGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~  219 (287)
                      +....  ..|+.+.+.++.
T Consensus       229 ~~~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        229 LSRQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             cCchhcCccCcEEEECCCc
Confidence            86432  256777776654

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.54  E-value=5.1e-13  Score=108.84  Aligned_cols=193  Identities=15%  Similarity=0.225  Sum_probs=127.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||.++++.|+++|++|++++|+.........     ...+....+.++++|+.+.+++.++++..     .+|+
T Consensus        11 tG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (253)
T PRK08217         11 TGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVA-----ECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNG   85 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998754221111     11111346788999999988887776642     5899


Q ss_pred             EEecCCCCcc-----------------------------cH----HHHHHhCC---CCccEEEEecceeeccCCCCCCCC
Q 023110           76 VYDINGREAD-----------------------------EV----EPILDALP---NLEQFIYCSSAGVYLKSDLLPHCE  119 (287)
Q Consensus        76 vi~~a~~~~~-----------------------------~~----~~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e  119 (287)
                      |||++|....                             +.    +.++..+.   ...+++++||...|+...      
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~------  159 (253)
T PRK08217         86 LINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMG------  159 (253)
T ss_pred             EEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCCC------
Confidence            9999985210                             01    11222221   224689999877654321      


Q ss_pred             CCCCCCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeH
Q 023110          120 TDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (287)
Q Consensus       120 ~~~~~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (287)
                           ...|..+|...+.+++       ..+++++.++||.+.++.... ..+..........+.         ..+.+.
T Consensus       160 -----~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~  224 (253)
T PRK08217        160 -----QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA-MKPEALERLEKMIPV---------GRLGEP  224 (253)
T ss_pred             -----CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc-cCHHHHHHHHhcCCc---------CCCcCH
Confidence                 1224488988877653       358999999999998875322 222222222222211         235678


Q ss_pred             HHHHHHHHHHHcCCccCCceEEecCCc
Q 023110          193 KDLARAFVQVLGNEKASRQVFNISGEK  219 (287)
Q Consensus       193 ~D~a~~~~~~~~~~~~~~~~~~i~~~~  219 (287)
                      +|+|+++..++.....+|++|+++++-
T Consensus       225 ~~~a~~~~~l~~~~~~~g~~~~~~gg~  251 (253)
T PRK08217        225 EEIAHTVRFIIENDYVTGRVLEIDGGL  251 (253)
T ss_pred             HHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence            999999999997655578899998864

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.54  E-value=1.1e-13  Score=112.49  Aligned_cols=179  Identities=16%  Similarity=0.097  Sum_probs=116.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|++|.++++.|+++|++|++++|++.......        .....++.++.+|+.|.+++.++++..     ++|.
T Consensus         6 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQELK--------DELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421111        011246888999999998888777532     6999


Q ss_pred             EEecCCCCcc---------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||++|....                     +    +..++.++.  +..++|++||...+..           ..+...
T Consensus        78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~  146 (248)
T PRK10538         78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP-----------YAGGNV  146 (248)
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC-----------CCCCch
Confidence            9999986310                     1    233444443  5678999999764311           112223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      | .+|...+.+.+       ..++.+.+++||.+.|+.........-....  ..   .+ .   ...++..+|+|++++
T Consensus       147 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~--~~---~~-~---~~~~~~~~dvA~~~~  217 (248)
T PRK10538        147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKA--EK---TY-Q---NTVALTPEDVSEAVW  217 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHH--Hh---hc-c---ccCCCCHHHHHHHHH
Confidence            4 88888877653       3579999999999986531100000000000  00   00 0   113468999999999


Q ss_pred             HHHcCCc
Q 023110          201 QVLGNEK  207 (287)
Q Consensus       201 ~~~~~~~  207 (287)
                      .++..+.
T Consensus       218 ~l~~~~~  224 (248)
T PRK10538        218 WVATLPA  224 (248)
T ss_pred             HHhcCCC
Confidence            9987553

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.54  E-value=1.2e-13  Score=112.86  Aligned_cols=189  Identities=15%  Similarity=0.068  Sum_probs=116.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+|+||++++++|+++|++|++++|+...... +.    ........++.++.+|+.|++++..++. .++|+|||++
T Consensus         8 tGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~id~vi~~a   81 (257)
T PRK09291          8 TGAGSGFGREVALRLARKGHNVIAGVQIAPQVTA-LR----AEAARRGLALRVEKLDLTDAIDRAQAAE-WDVDVLLNNA   81 (257)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHhcCCcceEEEeeCCCHHHHHHHhc-CCCCEEEECC
Confidence            7999999999999999999999999998654211 10    0001112468899999999999988775 3799999999


Q ss_pred             CCCc--------------------cc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHH
Q 023110           81 GREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLN  134 (287)
Q Consensus        81 ~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~  134 (287)
                      +...                    .+    ++.+++.+.  +.+++|++||...+...          +....|..+|..
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~----------~~~~~Y~~sK~a  151 (257)
T PRK09291         82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG----------PFTGAYCASKHA  151 (257)
T ss_pred             CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC----------CCcchhHHHHHH
Confidence            8531                    11    223344433  55799999996543211          111224488888


Q ss_pred             HHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCC-ccCCCCCCceeeeeeHHHHHHHHHHHHcCC
Q 023110          135 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       135 ~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (287)
                      +|.+.+       ..+++++++|||.+..+.... ....+......... +.. .+.......+..+|+++.++.++..+
T Consensus       152 ~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~  229 (257)
T PRK09291        152 LEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDT-MAETPKRWYDPARNFTDP-EDLAFPLEQFDPQEMIDAMVEVIPAD  229 (257)
T ss_pred             HHHHHHHHHHHHHhcCcEEEEEecCcccccchhh-hhhhhhhhcchhhHHHhh-hhhhccccCCCHHHHHHHHHHHhcCC
Confidence            886542       368999999999875432111 11111110000000 111 11122334578899999998888665


Q ss_pred             c
Q 023110          207 K  207 (287)
Q Consensus       207 ~  207 (287)
                      .
T Consensus       230 ~  230 (257)
T PRK09291        230 T  230 (257)
T ss_pred             C
Confidence            4

>PRK08017 oxidoreductase; Provisional

Probab=99.53  E-value=1.6e-13  Score=112.14  Aligned_cols=178  Identities=15%  Similarity=0.131  Sum_probs=117.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc------CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~------~~~d   74 (287)
                      |||+|+||+++++.|.++|++|++++|+..... .+.          ..+++.+.+|+.|.+++.++++.      ..+|
T Consensus         8 tGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~-~~~----------~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          8 TGCSSGIGLEAALELKRRGYRVLAACRKPDDVA-RMN----------SLGFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhH-HHH----------hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            799999999999999999999999999875421 111          13578899999998877666542      2578


Q ss_pred             EEEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      .++|++|....                    +    +..+++++.  +..++|++||...+....          ....|
T Consensus        77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------~~~~Y  146 (256)
T PRK08017         77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTP----------GRGAY  146 (256)
T ss_pred             EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCC----------CccHH
Confidence            99999986321                    1    122455554  567899999864322110          11124


Q ss_pred             hhhhHHHHHHh-------hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCC-CccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      ..+|...|.+.       ...+++++++|||.+..+..         ..+.... ..+....+...+.+++.+|+++++.
T Consensus       147 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~  217 (256)
T PRK08017        147 AASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFT---------DNVNQTQSDKPVENPGIAARFTLGPEAVVPKLR  217 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchh---------hcccchhhccchhhhHHHhhcCCCHHHHHHHHH
Confidence            48898888754       34689999999987755421         1111111 1111122223356799999999999


Q ss_pred             HHHcCCcc
Q 023110          201 QVLGNEKA  208 (287)
Q Consensus       201 ~~~~~~~~  208 (287)
                      .+++++..
T Consensus       218 ~~~~~~~~  225 (256)
T PRK08017        218 HALESPKP  225 (256)
T ss_pred             HHHhCCCC
Confidence            99987763

>PRK07985 oxidoreductase; Provisional

Probab=99.53  E-value=5.2e-13  Score=111.21  Aligned_cols=196  Identities=20%  Similarity=0.242  Sum_probs=124.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|.||++++++|+++|++|++..|+.... .+.+.    ....+....+.++.+|+.|.+++.+++++.     ++|
T Consensus        55 TGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  130 (294)
T PRK07985         55 TGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVK----KIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLD  130 (294)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHH----HHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            79999999999999999999999887754321 11111    011111245778999999998887776532     589


Q ss_pred             EEEecCCCC---------------------cccHHHHHHhC----CCCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           75 VVYDINGRE---------------------ADEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        75 ~vi~~a~~~---------------------~~~~~~ll~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      ++||+++..                     +.++..+++++    +...++|++||...+.....          ...|.
T Consensus       131 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~----------~~~Y~  200 (294)
T PRK07985        131 IMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH----------LLDYA  200 (294)
T ss_pred             EEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCC----------cchhH
Confidence            999999852                     11123344443    23358999999877643211          11244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      .+|..++.+.+       ..++++..++||.+.++.... ..............+.         ..+...+|+|.+++.
T Consensus       201 asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~r~~~pedva~~~~f  271 (294)
T PRK07985        201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPM---------KRAGQPAELAPVYVY  271 (294)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCC---------CCCCCHHHHHHHHHh
Confidence            88988876653       358999999999999884211 1111111111111111         124568999999999


Q ss_pred             HHcCCc--cCCceEEecCCc
Q 023110          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++....  ..|..+.+.++.
T Consensus       272 L~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        272 LASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             hhChhcCCccccEEeeCCCe
Confidence            986533  367788888764

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.53  E-value=1.7e-13  Score=113.00  Aligned_cols=200  Identities=17%  Similarity=0.117  Sum_probs=125.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||||.||+++++.|+++|++|++.+|+.........         ....+.++.+|+.|++++.++++.     .++|+
T Consensus        11 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825         11 TGGARGIGLATARALAALGARVAIGDLDEALAKETAA---------ELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---------HhccceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998655321111         012578899999999988776653     26899


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||++|....                    +    ++.++..+.  +..++|++||...+....          ....|.
T Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~  151 (273)
T PRK07825         82 LVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVP----------GMATYC  151 (273)
T ss_pred             EEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCC----------CCcchH
Confidence            9999986311                    1    222334433  567899999976542211          111244


Q ss_pred             hhhHHHHHHh-------hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+.       +..++++++++|+.+-.+..             .+..      ......+++.+|+|++++.+
T Consensus       152 asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~-------------~~~~------~~~~~~~~~~~~va~~~~~~  212 (273)
T PRK07825        152 ASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELI-------------AGTG------GAKGFKNVEPEDVAAAIVGT  212 (273)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhh-------------cccc------cccCCCCCCHHHHHHHHHHH
Confidence            7887665443       35689999999998755421             0000      01122468899999999999


Q ss_pred             HcCCccCCceEEecC----CcccCHHHHHHHHHHHhCCCC
Q 023110          203 LGNEKASRQVFNISG----EKYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       203 ~~~~~~~~~~~~i~~----~~~~s~~e~~~~i~~~~g~~~  238 (287)
                      +.++...........    ........+.+.+.+.++.+.
T Consensus       213 l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  252 (273)
T PRK07825        213 VAKPRPEVRVPRALGPLAQAQRLLPRRVREALNRLLGGDR  252 (273)
T ss_pred             HhCCCCEEeccHHHHHHHHHHHhCcHHHHHHHHHHhcccc
Confidence            987653110010000    011233456666666666543

>PRK06398 aldose dehydrogenase; Validated

Probab=99.53  E-value=9.2e-13  Score=107.76  Aligned_cols=187  Identities=15%  Similarity=0.164  Sum_probs=121.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|.++|++|++++|+...                ...+.++++|+.|++++.++++..     ++|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~----------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   75 (258)
T PRK06398         12 TGGSQGIGKAVVNRLKEEGSNVINFDIKEPS----------------YNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDI   75 (258)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCccc----------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654                136788999999998888777642     6899


Q ss_pred             EEecCCCCc--------------------ccHHHH----HHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l----l~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||++|...                    .+...+    ++.+.  +..++|++||...+....          ....|.
T Consensus        76 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~  145 (258)
T PRK06398         76 LVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTR----------NAAAYV  145 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCC----------CCchhh
Confidence            999998621                    112223    33332  457899999977653211          112244


Q ss_pred             hhhHHHHHHhhh------CCCcEEEEecCeeecCCCCCC-------hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          130 KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNP-------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       130 ~~k~~~E~~~~~------~~~~~~ilR~~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      .+|...+.+.+.      .++++..++||.+-.+.....       ...........      +........+...+|+|
T Consensus       146 ~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~p~eva  219 (258)
T PRK06398        146 TSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE------WGEMHPMKRVGKPEEVA  219 (258)
T ss_pred             hhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHh------hhhcCCcCCCcCHHHHH
Confidence            889988876642      248899999998866521100       00000000000      00000112346789999


Q ss_pred             HHHHHHHcCC--ccCCceEEecCCc
Q 023110          197 RAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      ++++.++...  ...|..+.+.++.
T Consensus       220 ~~~~~l~s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        220 YVVAFLASDLASFITGECVTVDGGL  244 (258)
T ss_pred             HHHHHHcCcccCCCCCcEEEECCcc
Confidence            9999988643  2367777777764

>PRK07069 short chain dehydrogenase; Validated

Probab=99.53  E-value=1.1e-13  Score=112.62  Aligned_cols=195  Identities=19%  Similarity=0.205  Sum_probs=121.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh--cCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.+.    ..+...  ...+.++.+|+.|.+++.++++..     ++
T Consensus         5 tG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          5 TGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFA----AEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH----HHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            7999999999999999999999999998322111111    000000  123456889999999888777532     68


Q ss_pred             cEEEecCCCCcc------------------------cHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           74 DVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      |+|||+++....                        .+..+++++.  +.+++|++||...+.....          ...
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~----------~~~  150 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPD----------YTA  150 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCC----------Cch
Confidence            999999986311                        2445666665  5679999999877543221          112


Q ss_pred             chhhhHHHHHHhhh---------CCCcEEEEecCeeecCCCCCCh----hHHHHHHHHcCCCccCCCCCCceeeeeeHHH
Q 023110          128 RHKGKLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       128 ~~~~k~~~E~~~~~---------~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      |..+|...+.+++.         .+++++.++||.+.+|......    .......+.++.+         ...+.+.+|
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  221 (251)
T PRK07069        151 YNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP---------LGRLGEPDD  221 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC---------CCCCcCHHH
Confidence            44888887766531         2488899999999887421100    0001111111111         123457899


Q ss_pred             HHHHHHHHHcCC--ccCCceEEecCC
Q 023110          195 LARAFVQVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~  218 (287)
                      +|++++.++...  ..+|..+.+.++
T Consensus       222 va~~~~~l~~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        222 VAHAVLYLASDESRFVTGAELVIDGG  247 (251)
T ss_pred             HHHHHHHHcCccccCccCCEEEECCC
Confidence            999999987653  225666666554

>PLN02253 xanthoxin dehydrogenase

Probab=99.53  E-value=9.6e-14  Score=114.96  Aligned_cols=198  Identities=16%  Similarity=0.093  Sum_probs=124.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.....+....     +. ...++.++++|+.|.+++.++++.     .++|+
T Consensus        24 tGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~   97 (280)
T PLN02253         24 TGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDS-----LG-GEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDI   97 (280)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-----hc-CCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999875432111110     00 024688999999999988887763     26899


Q ss_pred             EEecCCCCc----------------------ccHHHHHHhC----C--CCccEEEEeccee-eccCCCCCCCCCCCCCCC
Q 023110           76 VYDINGREA----------------------DEVEPILDAL----P--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        76 vi~~a~~~~----------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~  126 (287)
                      +||++|...                      .++..+++++    .  +..++|++||... ++..           .+.
T Consensus        98 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~~~  166 (280)
T PLN02253         98 MVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL-----------GPH  166 (280)
T ss_pred             EEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC-----------CCc
Confidence            999998631                      1122333332    1  3357888887553 2211           122


Q ss_pred             cchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-----hHHHH----HHHHcCCCccCCCCCCceeeee
Q 023110          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFF----HRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                      .|..+|...|.+.+       ..++++..++||.+.++......     ....+    .......++        ....+
T Consensus       167 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------~~~~~  238 (280)
T PLN02253        167 AYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANL--------KGVEL  238 (280)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCC--------cCCCC
Confidence            35589999887764       24799999999999776311100     00010    000011110        01246


Q ss_pred             eHHHHHHHHHHHHcCCc--cCCceEEecCCcccCH
Q 023110          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEKYVTF  223 (287)
Q Consensus       191 ~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s~  223 (287)
                      +.+|+|++++.++....  ..|..+++.++...+.
T Consensus       239 ~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
T PLN02253        239 TVDDVANAVLFLASDEARYISGLNLMIDGGFTCTN  273 (280)
T ss_pred             CHHHHHHHHHhhcCcccccccCcEEEECCchhhcc
Confidence            79999999999986532  2678888888754443

>PRK12743 oxidoreductase; Provisional

Probab=99.53  E-value=1.1e-12  Score=107.28  Aligned_cols=194  Identities=15%  Similarity=0.136  Sum_probs=122.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||++++++|+++|++|+++.++.....+.+.    ..+......+.++.+|+.+++++..++++     ..+|+
T Consensus         8 tGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12743          8 TASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETA----EEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDV   83 (256)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988765433111111    11111134688999999999888777763     25899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhCC-------CCccEEEEecceeeccCCCCCCCCCCCCCCC-c
Q 023110           76 VYDINGREA--------------------DEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-S  127 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~-~  127 (287)
                      |||+++...                    .+...+++++.       +..++|++||.....           +..+. .
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~-----------~~~~~~~  152 (256)
T PRK12743         84 LVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT-----------PLPGASA  152 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC-----------CCCCcch
Confidence            999998632                    11223333321       135899999965321           11222 2


Q ss_pred             chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      |..+|...+.+++       ..+++++.++||.+.++..... ...........  .+. +      ...+.+|++.++.
T Consensus       153 Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~--~~~-~------~~~~~~dva~~~~  222 (256)
T PRK12743        153 YTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD-DSDVKPDSRPG--IPL-G------RPGDTHEIASLVA  222 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc-ChHHHHHHHhc--CCC-C------CCCCHHHHHHHHH
Confidence            4488888776653       3579999999999998742211 11111111111  111 1      1347899999999


Q ss_pred             HHHcCCc--cCCceEEecCCc
Q 023110          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (287)
                      .++....  .+|..+.+.++.
T Consensus       223 ~l~~~~~~~~~G~~~~~dgg~  243 (256)
T PRK12743        223 WLCSEGASYTTGQSLIVDGGF  243 (256)
T ss_pred             HHhCccccCcCCcEEEECCCc
Confidence            8886532  357788887764

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.52  E-value=6.7e-13  Score=108.53  Aligned_cols=193  Identities=16%  Similarity=0.186  Sum_probs=121.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|.++|++|++++|+.....+..     ..+.....++.++.+|+.+.+++.++++..     ++|+
T Consensus        15 tGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (258)
T PRK06949         15 TGASSGLGARFAQVLAQAGAKVVLASRRVERLKELR-----AEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDI   89 (258)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            699999999999999999999999999865422111     111111346889999999999888877632     5899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----C--C--------CccEEEEecceeeccCCCCCCCCCC
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----P--N--------LEQFIYCSSAGVYLKSDLLPHCETD  121 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~--~--------~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (287)
                      +||+++...                    .+...+++++    .  .        ..++|++||...+...         
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------  160 (258)
T PRK06949         90 LVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL---------  160 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC---------
Confidence            999998521                    1122222221    1  1        3589999997664321         


Q ss_pred             CCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHH
Q 023110          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                        .+...| .+|...+.+++       ..++++++++||.++++................  .++       ...+...+
T Consensus       161 --~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~--~~~-------~~~~~~p~  229 (258)
T PRK06949        161 --PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVS--MLP-------RKRVGKPE  229 (258)
T ss_pred             --CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHh--cCC-------CCCCcCHH
Confidence              112234 78887776653       257999999999999885321111111111111  111       11344579


Q ss_pred             HHHHHHHHHHcCCc--cCCceEEecCC
Q 023110          194 DLARAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       194 D~a~~~~~~~~~~~--~~~~~~~i~~~  218 (287)
                      |+++++..++....  -+|..+.+.++
T Consensus       230 ~~~~~~~~l~~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        230 DLDGLLLLLAADESQFINGAIISADDG  256 (258)
T ss_pred             HHHHHHHHHhChhhcCCCCcEEEeCCC
Confidence            99999999886432  35666665553

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.52  E-value=8.9e-13  Score=107.67  Aligned_cols=196  Identities=14%  Similarity=0.143  Sum_probs=126.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||.+++++|.++|++|++++|+...... +.    ..+.....++.++.+|+.+.+++.++++.     .++|+
T Consensus        17 tG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~-~~----~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   91 (255)
T PRK06113         17 TGAGAGIGKEIAITFATAGASVVVSDINADAANH-VV----DEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDI   91 (255)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HH----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999987654211 11    01111124678899999999988877653     26899


Q ss_pred             EEecCCCCc-------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchh
Q 023110           76 VYDINGREA-------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (287)
Q Consensus        76 vi~~a~~~~-------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  130 (287)
                      +||+++...                   .+..++++++    .  +..++|++||.......          .....|..
T Consensus        92 li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~Y~~  161 (255)
T PRK06113         92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN----------INMTSYAS  161 (255)
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCC----------CCcchhHH
Confidence            999998521                   1233344443    2  34589999997643111          11122448


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      +|...+.+++       ..++++.++.||.+..+.......+.+.....+..++         ..+...+|++++++.++
T Consensus       162 sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~a~~~~~l~  232 (255)
T PRK06113        162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------RRLGQPQDIANAALFLC  232 (255)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHc
Confidence            9998887763       2478899999998876632211112222222222111         12457899999999998


Q ss_pred             cCCc--cCCceEEecCCcc
Q 023110          204 GNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       204 ~~~~--~~~~~~~i~~~~~  220 (287)
                      ....  .+|+.+++.++..
T Consensus       233 ~~~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        233 SPAASWVSGQILTVSGGGV  251 (255)
T ss_pred             CccccCccCCEEEECCCcc
Confidence            6532  2688889888753

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.52  E-value=8e-13  Score=107.46  Aligned_cols=192  Identities=17%  Similarity=0.171  Sum_probs=123.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||.+++++|+++|++|++++|+......       .........+.++.+|+.+.+++..++++     .++|+
T Consensus        11 tGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832        11 TGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQ-------QQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHH-------HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987532100       11111134688999999999988877653     26999


Q ss_pred             EEecCCCCcc--------------------cHHHHHHh----CC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||++|....                    +...++++    +.  + ..++|++||...+.....          ...|
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------~~~Y  153 (248)
T TIGR01832        84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIR----------VPSY  153 (248)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCC----------Cchh
Confidence            9999986311                    12223333    21  2 468999999877643211          1124


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChh-HHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      ..+|...+.+.+       ..+++++.++||.+..+....... ..........  .+       ...++..+|+|++++
T Consensus       154 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~  224 (248)
T TIGR01832       154 TASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILER--IP-------AGRWGTPDDIGGPAV  224 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhc--CC-------CCCCcCHHHHHHHHH
Confidence            488888876653       248999999999998774211000 0111111111  11       135788999999999


Q ss_pred             HHHcCCc--cCCceEEecCC
Q 023110          201 QVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~  218 (287)
                      .++....  ..|..+.+.++
T Consensus       225 ~l~s~~~~~~~G~~i~~dgg  244 (248)
T TIGR01832       225 FLASSASDYVNGYTLAVDGG  244 (248)
T ss_pred             HHcCccccCcCCcEEEeCCC
Confidence            9986533  24666666655

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.51  E-value=2.1e-13  Score=112.32  Aligned_cols=187  Identities=18%  Similarity=0.114  Sum_probs=119.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|.++|++|++++|+..... .            ..+++++++|+.|++++.++++..     .+|+
T Consensus        10 tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~-~------------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~   76 (270)
T PRK06179         10 TGASSGIGRATAEKLARAGYRVFGTSRNPARAA-P------------IPGVELLELDVTDDASVQAAVDEVIARAGRIDV   76 (270)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-c------------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999999865421 1            246889999999999998888742     5899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||++|...                    .+...++++    ++  +..++|++||...+....          ....|.
T Consensus        77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y~  146 (270)
T PRK06179         77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAP----------YMALYA  146 (270)
T ss_pred             EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCC----------CccHHH
Confidence            999998732                    122233333    43  678999999976543211          111244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-----hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      .+|...|.+.+       ..++++++++||.+.++......     .... ........ ....  .........+|+|+
T Consensus       147 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~--~~~~~~~~~~~va~  222 (270)
T PRK06179        147 ASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEY-DRERAVVS-KAVA--KAVKKADAPEVVAD  222 (270)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhh-HHHHHHHH-HHHH--hccccCCCHHHHHH
Confidence            88888876653       46899999999999876421100     0000 00000000 0000  00112356789999


Q ss_pred             HHHHHHcCCccCCceEEe
Q 023110          198 AFVQVLGNEKASRQVFNI  215 (287)
Q Consensus       198 ~~~~~~~~~~~~~~~~~i  215 (287)
                      .++.++..+. ....|..
T Consensus       223 ~~~~~~~~~~-~~~~~~~  239 (270)
T PRK06179        223 TVVKAALGPW-PKMRYTA  239 (270)
T ss_pred             HHHHHHcCCC-CCeeEec
Confidence            9999887654 2345544

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.51  E-value=3e-13  Score=109.15  Aligned_cols=184  Identities=18%  Similarity=0.185  Sum_probs=118.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|++|++++++|+++|++|++++|++........     .+.. ...++++.+|+.+.+++.++++..     ++|+
T Consensus        12 tGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----~l~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (237)
T PRK07326         12 TGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAA-----ELNN-KGNVLGLAADVRDEADVQRAVDAIVAAFGGLDV   85 (237)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHH-----HHhc-cCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998754221111     0110 146888999999999888877642     6899


Q ss_pred             EEecCCCCcc--------------------cHHHHHHh----CC-CCccEEEEecceeeccCCCCCCCCCCCCCCCc-ch
Q 023110           76 VYDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~~  129 (287)
                      |||+++....                    +...++++    ++ +..++|++||...+...           .... |.
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~~y~  154 (237)
T PRK07326         86 LIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFF-----------AGGAAYN  154 (237)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCC-----------CCCchHH
Confidence            9999876321                    12233333    32 45689999987653211           1122 34


Q ss_pred             hhhHHHHHHh-------hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+.       +..+++++++||+.+.++....             .+.    .  .....+..+|++++++.+
T Consensus       155 ~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~-------------~~~----~--~~~~~~~~~d~a~~~~~~  215 (237)
T PRK07326        155 ASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGH-------------TPS----E--KDAWKIQPEDIAQLVLDL  215 (237)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccc-------------ccc----h--hhhccCCHHHHHHHHHHH
Confidence            7777665544       2358999999999887763110             000    0  000136789999999999


Q ss_pred             HcCCcc-CCceEEecCCcc
Q 023110          203 LGNEKA-SRQVFNISGEKY  220 (287)
Q Consensus       203 ~~~~~~-~~~~~~i~~~~~  220 (287)
                      +..+.. ......+..+.+
T Consensus       216 l~~~~~~~~~~~~~~~~~~  234 (237)
T PRK07326        216 LKMPPRTLPSKIEVRPSRP  234 (237)
T ss_pred             HhCCccccccceEEecCCC
Confidence            977643 344555544443

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.51  E-value=4.2e-13  Score=108.52  Aligned_cols=174  Identities=21%  Similarity=0.229  Sum_probs=115.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|++|.+++++|+++|++|++++|+.....+..     ..+.....++.++.+|+.+++++.++++..     ++|+
T Consensus        13 tG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (239)
T PRK07666         13 TGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVA-----EEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDI   87 (239)
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccE
Confidence            699999999999999999999999999865422111     111111346888999999999988887642     6899


Q ss_pred             EEecCCCCcc--------------------cHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCc-c
Q 023110           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-R  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~  128 (287)
                      |||+++....                    ++.++++++    .  +.+++|++||...+....           +.. |
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-----------~~~~Y  156 (239)
T PRK07666         88 LINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAA-----------VTSAY  156 (239)
T ss_pred             EEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCC-----------CCcch
Confidence            9999986421                    112233332    2  457899999876543211           122 3


Q ss_pred             hhhhHHHHHHh-------hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       129 ~~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      ..+|...+.++       ...+++++++|||.+.++.....           ....   +.   ...++..+|+|+++..
T Consensus       157 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~-----------~~~~---~~---~~~~~~~~~~a~~~~~  219 (239)
T PRK07666        157 SASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL-----------GLTD---GN---PDKVMQPEDLAEFIVA  219 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc-----------cccc---cC---CCCCCCHHHHHHHHHH
Confidence            37787766554       23589999999999887632100           0000   11   1235778999999999


Q ss_pred             HHcCCc
Q 023110          202 VLGNEK  207 (287)
Q Consensus       202 ~~~~~~  207 (287)
                      ++.++.
T Consensus       220 ~l~~~~  225 (239)
T PRK07666        220 QLKLNK  225 (239)
T ss_pred             HHhCCC
Confidence            997763

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.51  E-value=9.3e-13  Score=107.37  Aligned_cols=192  Identities=15%  Similarity=0.183  Sum_probs=122.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----C-cc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G-FD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~-~d   74 (287)
                      |||+|+||+++++.|+++|++|++..++.....+.+.       .....++.++++|+.+++++..++++.     . +|
T Consensus        11 tGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642         11 TGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALA-------DELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             eCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-------HHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            7999999999999999999999987664332111111       011246888999999999888887642     2 89


Q ss_pred             EEEecCCCC--------------------------cccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCC
Q 023110           75 VVYDINGRE--------------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (287)
Q Consensus        75 ~vi~~a~~~--------------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (287)
                      ++||+++..                          ..+...+++++    .  +..++|++||.....           +
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~  152 (253)
T PRK08642         84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN-----------P  152 (253)
T ss_pred             EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC-----------C
Confidence            999998742                          11123344432    2  456899999854321           1


Q ss_pred             CCCCc-chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHH
Q 023110          123 VDPKS-RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       123 ~~~~~-~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      ..+.. |..+|...|.+++       ..++++..++||.+..+.................  .+.       ..+.+.+|
T Consensus       153 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~  223 (253)
T PRK08642        153 VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAAT--TPL-------RKVTTPQE  223 (253)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhc--CCc-------CCCCCHHH
Confidence            12223 4499999988764       2478999999998866521111111122222211  111       23678999


Q ss_pred             HHHHHHHHHcCC--ccCCceEEecCCc
Q 023110          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      +|+++..++...  ...|+.+.+.++.
T Consensus       224 va~~~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        224 FADAVLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             HHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            999999998643  3367888887763

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.51  E-value=9.8e-13  Score=106.79  Aligned_cols=194  Identities=16%  Similarity=0.178  Sum_probs=122.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEE-EcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|++|++++++|+++|++|+++ .|+.........     .+......+.++.+|+.|++++.++++..     ++|
T Consensus        11 ~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (247)
T PRK05565         11 TGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLE-----EIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKID   85 (247)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH-----HHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            6999999999999999999999998 887654211111     01111246889999999999888877632     689


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +|||+++...                    .+...++++    +.  +..++|++||...+.....          ...|
T Consensus        86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~----------~~~y  155 (247)
T PRK05565         86 ILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASC----------EVLY  155 (247)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCC----------ccHH
Confidence            9999998642                    112223333    22  4567999999765432111          0113


Q ss_pred             hhhhHHHHHHh-------hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       129 ~~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      ..+|...+.++       ...+++++.+|||.+.++.... ............  .       ....+...+|++++++.
T Consensus       156 ~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~-~~~~~~~~~~~~--~-------~~~~~~~~~~va~~~~~  225 (247)
T PRK05565        156 SASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSS-FSEEDKEGLAEE--I-------PLGRLGKPEEIAKVVLF  225 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccc-cChHHHHHHHhc--C-------CCCCCCCHHHHHHHHHH
Confidence            37776655544       2458999999999987654222 111111111110  0       11235678999999999


Q ss_pred             HHcCCc--cCCceEEecCCc
Q 023110          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++....  ..|+.+++.++.
T Consensus       226 l~~~~~~~~~g~~~~~~~~~  245 (247)
T PRK05565        226 LASDDASYITGQIITVDGGW  245 (247)
T ss_pred             HcCCccCCccCcEEEecCCc
Confidence            986543  367777777653

>PRK08264 short chain dehydrogenase; Validated

Probab=99.51  E-value=6.9e-13  Score=107.14  Aligned_cols=161  Identities=17%  Similarity=0.173  Sum_probs=112.5

Q ss_pred             CCcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~   78 (287)
                      |||+|++|+++++.|+++|+ +|++++|+.....+ .           ..++.++.+|+.|.+.+.++++.. .+|+|||
T Consensus        12 tGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   79 (238)
T PRK08264         12 TGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-L-----------GPRVVPLQLDVTDPASVAAAAEAASDVTILVN   79 (238)
T ss_pred             ECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-c-----------CCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            79999999999999999999 99999998765321 1           357889999999999998888743 4899999


Q ss_pred             cCCC-C--------------------cccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhh
Q 023110           79 INGR-E--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (287)
Q Consensus        79 ~a~~-~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  131 (287)
                      +++. .                    ..+...++++    +.  +..+||++||...+....          ....|..+
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~----------~~~~y~~s  149 (238)
T PRK08264         80 NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFP----------NLGTYSAS  149 (238)
T ss_pred             CCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCC----------CchHhHHH
Confidence            9987 1                    1122334444    22  457899999977653211          11224488


Q ss_pred             hHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      |..+|.+.+       ..+++++++||+.+.++...             +.      .    ...+..+|+++.++..+.
T Consensus       150 K~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~-------------~~------~----~~~~~~~~~a~~~~~~~~  206 (238)
T PRK08264        150 KAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA-------------GL------D----APKASPADVARQILDALE  206 (238)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccc-------------cC------C----cCCCCHHHHHHHHHHHHh
Confidence            888876553       24899999999988765210             00      0    013556788888887776


Q ss_pred             CC
Q 023110          205 NE  206 (287)
Q Consensus       205 ~~  206 (287)
                      .+
T Consensus       207 ~~  208 (238)
T PRK08264        207 AG  208 (238)
T ss_pred             CC
Confidence            54

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.50  E-value=1.4e-12  Score=106.75  Aligned_cols=194  Identities=13%  Similarity=0.176  Sum_probs=124.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||.+++++|+++|++|+++.|+. ... .+.    ..+......+.++.+|+.+.+++..++++.     .+|+
T Consensus        21 tGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~-~~~----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   94 (258)
T PRK06935         21 TGGNTGLGQGYAVALAKAGADIIITTHGT-NWD-ETR----RLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDI   94 (258)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHH-HHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999983 211 111    111111346889999999999888877643     6899


Q ss_pred             EEecCCCCc--------------------cc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+++...                    .+    ++.++..+.  +..++|++||...+.....          ...|.
T Consensus        95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~Y~  164 (258)
T PRK06935         95 LVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKF----------VPAYT  164 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCC----------chhhH
Confidence            999998631                    11    222333333  4568999999876532211          11244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      .+|...+.+.+       ..++++..++||.+..+..... ............  ++       ..-+...+|+|.++..
T Consensus       165 asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~  235 (258)
T PRK06935        165 ASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKR--IP-------AGRWGEPDDLMGAAVF  235 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhc--CC-------CCCCCCHHHHHHHHHH
Confidence            88888887653       3579999999999877632110 001111111111  11       1235668999999998


Q ss_pred             HHcCCc--cCCceEEecCCc
Q 023110          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++....  ..|.++.+.++.
T Consensus       236 l~s~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        236 LASRASDYVNGHILAVDGGW  255 (258)
T ss_pred             HcChhhcCCCCCEEEECCCe
Confidence            886432  367788777763

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.50  E-value=9.2e-13  Score=108.98  Aligned_cols=195  Identities=14%  Similarity=0.206  Sum_probs=124.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.........     .+.....++.++++|+.+.+++..+++.     .++|+
T Consensus        16 tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   90 (278)
T PRK08277         16 TGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVA-----EIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDI   90 (278)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654221111     1111124678899999999888877653     26899


Q ss_pred             EEecCCCCcc-----------------------------------c----HHHHHHhCC--CCccEEEEecceeeccCCC
Q 023110           76 VYDINGREAD-----------------------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDL  114 (287)
Q Consensus        76 vi~~a~~~~~-----------------------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~  114 (287)
                      +||+++....                                   +    .+.+++.+.  +..++|++||...+.....
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~  170 (278)
T PRK08277         91 LINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTK  170 (278)
T ss_pred             EEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCCC
Confidence            9999984210                                   0    112333333  4578999999877542111


Q ss_pred             CCCCCCCCCCCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh------hHHHHHHHHcCCCccCCC
Q 023110          115 LPHCETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV------EEWFFHRLKAGRPIPIPG  181 (287)
Q Consensus       115 ~~~~e~~~~~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~------~~~~~~~~~~~~~~~~~~  181 (287)
                                ...|..+|...+.+++       ..++++..++||.+.++......      ............+     
T Consensus       171 ----------~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p-----  235 (278)
T PRK08277        171 ----------VPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTP-----  235 (278)
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCC-----
Confidence                      1124488998887663       34799999999999887421100      0001111111111     


Q ss_pred             CCCceeeeeeHHHHHHHHHHHHcC-Cc--cCCceEEecCCc
Q 023110          182 SGIQVTQLGHVKDLARAFVQVLGN-EK--ASRQVFNISGEK  219 (287)
Q Consensus       182 ~~~~~~~~i~~~D~a~~~~~~~~~-~~--~~~~~~~i~~~~  219 (287)
                          ..-+...+|+|++++.++.. ..  .+|..+.+.++.
T Consensus       236 ----~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~  272 (278)
T PRK08277        236 ----MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF  272 (278)
T ss_pred             ----ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence                11245689999999998865 22  367788887763

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.50  E-value=5.8e-13  Score=107.81  Aligned_cols=176  Identities=14%  Similarity=0.130  Sum_probs=116.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.+|++++++|+++|++|++++|+...... +.    ....+...++.++.+|+.+.+++.++++.     .++|+
T Consensus        12 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (241)
T PRK07454         12 TGASSGIGKATALAFAKAGWDLALVARSQDALEA-LA----AELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDV   86 (241)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998754221 11    01111134688899999999988777763     25899


Q ss_pred             EEecCCCCc--------------------ccH----HHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||++|...                    .+.    +.+++.+.  +..++|++||...++....          ...|.
T Consensus        87 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------~~~Y~  156 (241)
T PRK07454         87 LINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQ----------WGAYC  156 (241)
T ss_pred             EEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCC----------ccHHH
Confidence            999998621                    111    22333333  4578999999877643211          11233


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+.+       ..+++++++|||.+-.+.....             ...  .. .....++..+|+|++++.+
T Consensus       157 ~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~-------------~~~--~~-~~~~~~~~~~~va~~~~~l  220 (241)
T PRK07454        157 VSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE-------------TVQ--AD-FDRSAMLSPEQVAQTILHL  220 (241)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc-------------ccc--cc-cccccCCCHHHHHHHHHHH
Confidence            88888776542       3589999999999877631100             000  00 0011347899999999999


Q ss_pred             HcCCc
Q 023110          203 LGNEK  207 (287)
Q Consensus       203 ~~~~~  207 (287)
                      +..+.
T Consensus       221 ~~~~~  225 (241)
T PRK07454        221 AQLPP  225 (241)
T ss_pred             HcCCc
Confidence            98764

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.50  E-value=1.6e-12  Score=106.02  Aligned_cols=195  Identities=14%  Similarity=0.127  Sum_probs=123.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.....+...     .+......+..+.+|+.|.+++.++++.     ..+|+
T Consensus        15 tGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   89 (254)
T PRK08085         15 TGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVA-----KLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDV   89 (254)
T ss_pred             ECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-----HHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654221111     1111123577889999999988887753     25899


Q ss_pred             EEecCCCCc--------------------ccHHHHHH----hCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~----~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+++...                    .+...+++    .+.  +..++|++||.......          .....|.
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~Y~  159 (254)
T PRK08085         90 LINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGR----------DTITPYA  159 (254)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCC----------CCCcchH
Confidence            999998631                    11122233    332  45689999986532111          1111244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      .+|...+.+.+       ..++++..++||.+.++...... ...+........+.         ..+...+|+|.++..
T Consensus       160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~~va~~~~~  230 (254)
T PRK08085        160 ASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPA---------ARWGDPQELIGAAVF  230 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence            88988887663       35899999999999887421100 11122222221111         235678999999998


Q ss_pred             HHcCC--ccCCceEEecCCc
Q 023110          202 VLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~  219 (287)
                      ++...  .-+|....+.++.
T Consensus       231 l~~~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        231 LSSKASDFVNGHLLFVDGGM  250 (254)
T ss_pred             HhCccccCCcCCEEEECCCe
Confidence            88643  2367777776654

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.50  E-value=2.2e-12  Score=105.31  Aligned_cols=196  Identities=15%  Similarity=0.204  Sum_probs=124.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||.+++++|.++|++|++++|+........     ..+.....++.++.+|+.+++++.+++++.     .+|+
T Consensus        12 tGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (254)
T PRK07478         12 TGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLV-----AEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDI   86 (254)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999866532111     111111246788999999998888777632     6899


Q ss_pred             EEecCCCCcc-------------------------cHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD-------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~-------------------------~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||++|....                         .++.++..+.  +..++|++||...+....         .....|
T Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~---------~~~~~Y  157 (254)
T PRK07478         87 AFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGF---------PGMAAY  157 (254)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCC---------CCcchh
Confidence            9999986310                         0223344443  456899999976542100         011124


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      ..+|...+.+.+       ..++.+..++||.+-.+.... ..............+         ...+...+|+|++++
T Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~  228 (254)
T PRK07478        158 AASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHA---------LKRMAQPEEIAQAAL  228 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence            488988876653       347999999999987663111 000111111111111         112456899999999


Q ss_pred             HHHcCCc--cCCceEEecCCc
Q 023110          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (287)
                      .++....  ..|+.+.+.++.
T Consensus       229 ~l~s~~~~~~~G~~~~~dgg~  249 (254)
T PRK07478        229 FLASDAASFVTGTALLVDGGV  249 (254)
T ss_pred             HHcCchhcCCCCCeEEeCCch
Confidence            9886532  267777777654

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.50  E-value=1.9e-12  Score=105.48  Aligned_cols=189  Identities=17%  Similarity=0.105  Sum_probs=123.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|.++|++|++++|+....   ..          ...+.++++|+.+.+++.++++..     ++|+
T Consensus        12 tGas~gIG~~la~~l~~~g~~v~~~~r~~~~~---~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   78 (252)
T PRK07856         12 TGGTRGIGAGIARAFLAAGATVVVCGRRAPET---VD----------GRPAEFHAADVRDPDQVAALVDAIVERHGRLDV   78 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCChhhh---hc----------CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986430   11          246889999999999888877632     5799


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----C---CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----P---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||++|...                    .++..+++++    .   +..++|++||...+....          ....|
T Consensus        79 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------~~~~Y  148 (252)
T PRK07856         79 LVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSP----------GTAAY  148 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCC----------CCchh
Confidence            999998631                    1122333332    1   236899999976542111          11224


Q ss_pred             hhhhHHHHHHhhh------CCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          129 HKGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       129 ~~~k~~~E~~~~~------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      ..+|...|.+++.      ..+++..++||.+..+...... ............+.         ..+...+|+|++++.
T Consensus       149 ~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~p~~va~~~~~  219 (252)
T PRK07856        149 GAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPL---------GRLATPADIAWACLF  219 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCC---------CCCcCHHHHHHHHHH
Confidence            4889988877642      2378899999988776321100 00111111111111         124568999999999


Q ss_pred             HHcCC--ccCCceEEecCCccc
Q 023110          202 VLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~~  221 (287)
                      ++...  ..+|..+.+.++...
T Consensus       220 L~~~~~~~i~G~~i~vdgg~~~  241 (252)
T PRK07856        220 LASDLASYVSGANLEVHGGGER  241 (252)
T ss_pred             HcCcccCCccCCEEEECCCcch
Confidence            88653  237788888877543

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.49  E-value=6.4e-13  Score=108.63  Aligned_cols=205  Identities=13%  Similarity=0.104  Sum_probs=121.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||.++++.|+++|++|+.+.++.....+..+... ..+......+.++++|+.+++++.+++++     .++|+
T Consensus        14 tGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   92 (257)
T PRK12744         14 AGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETV-AAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDI   92 (257)
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHH-HHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCE
Confidence            6999999999999999999998888765432111111100 11111124688899999999998887764     26899


Q ss_pred             EEecCCCC--------------------cccHHHHHHhC----CCCccEEEEecceeeccCCCCCCCCCCCCCCCcchhh
Q 023110           76 VYDINGRE--------------------ADEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (287)
Q Consensus        76 vi~~a~~~--------------------~~~~~~ll~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  131 (287)
                      +||++|..                    ..++..+++++    ....++++++|.......          +....|..+
T Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~----------~~~~~Y~~s  162 (257)
T PRK12744         93 AINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT----------PFYSAYAGS  162 (257)
T ss_pred             EEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC----------CCcccchhh
Confidence            99999862                    11122333433    223466665333221110          111234599


Q ss_pred             hHHHHHHhhh-------CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          132 KLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       132 k~~~E~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      |..+|.+++.       .+++++.++||.+.++.............   .... ....+.....+.+.+|+|.++..+++
T Consensus       163 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~dva~~~~~l~~  238 (257)
T PRK12744        163 KAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAY---HKTA-AALSPFSKTGLTDIEDIVPFIRFLVT  238 (257)
T ss_pred             HHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhc---cccc-ccccccccCCCCCHHHHHHHHHHhhc
Confidence            9998887642       36999999999997763211000000000   0000 00111112247789999999999998


Q ss_pred             CCc-cCCceEEecCCcc
Q 023110          205 NEK-ASRQVFNISGEKY  220 (287)
Q Consensus       205 ~~~-~~~~~~~i~~~~~  220 (287)
                      ... .+|+.+++.++..
T Consensus       239 ~~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        239 DGWWITGQTILINGGYT  255 (257)
T ss_pred             ccceeecceEeecCCcc
Confidence            532 2578888887643

>PRK08643 acetoin reductase; Validated

Probab=99.49  E-value=2e-12  Score=105.69  Aligned_cols=198  Identities=17%  Similarity=0.276  Sum_probs=122.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||.++++.|+++|++|++++|+.........     .+.....++.++++|+.+++.+.++++..     ++|+
T Consensus         8 tGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (256)
T PRK08643          8 TGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAAD-----KLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNV   82 (256)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998654221111     11111246788999999999888877642     6899


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC---CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||++|....                    +    ++.+++.+.   ...++|++||...+....          ....|
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y  152 (256)
T PRK08643         83 VVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP----------ELAVY  152 (256)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC----------CCchh
Confidence            9999986311                    1    112333332   235899999865432111          11224


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHc--CCCcc-----CCCCCCceeeeeeHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPIP-----IPGSGIQVTQLGHVKD  194 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~i~~~D  194 (287)
                      ..+|...+.+.+       ..+++++.++||.+.+|...     ........  +.+..     +... .....+...+|
T Consensus       153 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  226 (256)
T PRK08643        153 SSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMF-----DIAHQVGENAGKPDEWGMEQFAKD-ITLGRLSEPED  226 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhh-----HHHhhhccccCCCchHHHHHHhcc-CCCCCCcCHHH
Confidence            488888776553       35799999999998876311     11000000  00000     0000 00112456899


Q ss_pred             HHHHHHHHHcCC--ccCCceEEecCCc
Q 023110          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      +|.++..++...  ..+|..+.+.++.
T Consensus       227 va~~~~~L~~~~~~~~~G~~i~vdgg~  253 (256)
T PRK08643        227 VANCVSFLAGPDSDYITGQTIIVDGGM  253 (256)
T ss_pred             HHHHHHHHhCccccCccCcEEEeCCCe
Confidence            999999988643  3467788777664

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.49  E-value=2.2e-12  Score=104.89  Aligned_cols=195  Identities=17%  Similarity=0.171  Sum_probs=117.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+.+++.|+++|++|+++.++.....+...    ..+.....++.++++|+.+.+++.+++++.     .+|+
T Consensus         8 tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06947          8 TGASRGIGRATAVLAAARGWSVGINYARDAAAAEETA----DAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDA   83 (248)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999877644322111110    011111346889999999998887776532     6899


Q ss_pred             EEecCCCCcc---------------------cHHHHHHh----CC--C---CccEEEEeccee-eccCCCCCCCCCCCCC
Q 023110           76 VYDINGREAD---------------------EVEPILDA----LP--N---LEQFIYCSSAGV-YLKSDLLPHCETDTVD  124 (287)
Q Consensus        76 vi~~a~~~~~---------------------~~~~ll~~----~~--~---~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~  124 (287)
                      +||++|....                     +...++++    +.  +   ..++|++||... ++...          .
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~----------~  153 (248)
T PRK06947         84 LVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN----------E  153 (248)
T ss_pred             EEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC----------C
Confidence            9999986311                     11223222    21  1   235999998654 32111          0


Q ss_pred             CCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ...|..+|..++.+.+       ..+++++++|||.+..|.....-.+.......  ...+.       --....+|+++
T Consensus       154 ~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~--~~~~~-------~~~~~~e~va~  224 (248)
T PRK06947        154 YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLG--AQTPL-------GRAGEADEVAE  224 (248)
T ss_pred             CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHh--hcCCC-------CCCcCHHHHHH
Confidence            1124588888775542       34799999999999887421100111111111  11111       11356899999


Q ss_pred             HHHHHHcCCc--cCCceEEecCC
Q 023110          198 AFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~  218 (287)
                      .++.++.+..  ..|+.+.+.++
T Consensus       225 ~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        225 TIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             HHHHHcCccccCcCCceEeeCCC
Confidence            9999887643  36666666553

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.49  E-value=3.3e-12  Score=105.21  Aligned_cols=181  Identities=13%  Similarity=0.129  Sum_probs=116.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.........     .+......+.++.+|+.|.+++.++++.     .++|+
T Consensus         6 tGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          6 TGAASGLGRAIALRWAREGWRLALADVNEEGGEETLK-----LLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654221111     0111134678899999999888877753     26899


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||++|....                    +    ++.+++.+.  +..++|++||...+....          ....|.
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------~~~~Y~  150 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGP----------AMSSYN  150 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCC----------CchHHH
Confidence            9999986321                    1    223444444  567999999976643211          111234


Q ss_pred             hhhHHHHHHh-------hhCCCcEEEEecCeeecCCCCC--ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 ~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      .+|...+.+.       ...++++++++||.+.++....  ...+...... . ..        ....+++.+|+|+.++
T Consensus       151 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~-~-~~--------~~~~~~~~~~vA~~i~  220 (270)
T PRK05650        151 VAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQV-G-KL--------LEKSPITAADIADYIY  220 (270)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHH-H-HH--------hhcCCCCHHHHHHHHH
Confidence            7888755443       2358999999999998764211  0011111000 0 00        0113478999999999


Q ss_pred             HHHcCC
Q 023110          201 QVLGNE  206 (287)
Q Consensus       201 ~~~~~~  206 (287)
                      ..++++
T Consensus       221 ~~l~~~  226 (270)
T PRK05650        221 QQVAKG  226 (270)
T ss_pred             HHHhCC
Confidence            999764

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.49  E-value=2.6e-12  Score=105.42  Aligned_cols=193  Identities=13%  Similarity=0.115  Sum_probs=120.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||.+++++|+++|++|++++|+.+...+...     .+.....++.++.+|+.+.+++.++++..     ++|+
T Consensus        16 tGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   90 (263)
T PRK07814         16 TGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAE-----QIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDI   90 (263)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654221110     11111346888999999999888777632     6899


Q ss_pred             EEecCCCC--------------------cccHHHHHHhCC-------CCccEEEEecceeeccCCCCCCCCCCCCCCCc-
Q 023110           76 VYDINGRE--------------------ADEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-  127 (287)
Q Consensus        76 vi~~a~~~--------------------~~~~~~ll~~~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-  127 (287)
                      |||+|+..                    ..++.++++++.       +..++|++||......           ..+.. 
T Consensus        91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~~~  159 (263)
T PRK07814         91 VVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA-----------GRGFAA  159 (263)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC-----------CCCCch
Confidence            99999852                    122334444432       3468999998643211           11222 


Q ss_pred             chhhhHHHHHHhhh------CCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          128 RHKGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       128 ~~~~k~~~E~~~~~------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      |..+|..++.+++.      .++++..++||.+..+..... -...+........+         .......+|+|++++
T Consensus       160 Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~  230 (263)
T PRK07814        160 YGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATP---------LRRLGDPEDIAAAAV  230 (263)
T ss_pred             hHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence            44899988877642      257888999998865521100 00111111111111         112456899999999


Q ss_pred             HHHcCC--ccCCceEEecCC
Q 023110          201 QVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~  218 (287)
                      .++...  ...++.+.+.++
T Consensus       231 ~l~~~~~~~~~g~~~~~~~~  250 (263)
T PRK07814        231 YLASPAGSYLTGKTLEVDGG  250 (263)
T ss_pred             HHcCccccCcCCCEEEECCC
Confidence            998653  235667776654

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.49  E-value=1.3e-12  Score=107.09  Aligned_cols=197  Identities=18%  Similarity=0.218  Sum_probs=124.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh--hcCCeEEEEecCCChHHHHhhhhc-----CCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~D~~d~~~~~~~~~~-----~~~   73 (287)
                      |||+|.||+++++.|+++|++|++++|+.+...+...     .+..  ....+.++++|+.|++++..+++.     ..+
T Consensus        13 tGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   87 (260)
T PRK07063         13 TGAAQGIGAAIARAFAREGAAVALADLDAALAERAAA-----AIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPL   87 (260)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999998654221111     1111  124578899999999888887763     269


Q ss_pred             cEEEecCCCCc--------------------ccH----HHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           74 DVVYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~--------------------~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      |++||++|...                    .+.    +.++..+.  +..++|++||...+....          ....
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~  157 (260)
T PRK07063         88 DVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIP----------GCFP  157 (260)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCC----------CchH
Confidence            99999998631                    112    22333332  456899999976532211          1112


Q ss_pred             chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-----hHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      |..+|...+.+.+       ..++++..++||.+-.+.....+     ............+.         .-+...+|+
T Consensus       158 Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~r~~~~~~v  228 (260)
T PRK07063        158 YPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM---------KRIGRPEEV  228 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC---------CCCCCHHHH
Confidence            3488998887663       34799999999988665311000     00001111111111         124468999


Q ss_pred             HHHHHHHHcCCc--cCCceEEecCCccc
Q 023110          196 ARAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (287)
                      |.+++.++....  -.|+.+.+.++...
T Consensus       229 a~~~~fl~s~~~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        229 AMTAVFLASDEAPFINATCITIDGGRSV  256 (260)
T ss_pred             HHHHHHHcCccccccCCcEEEECCCeee
Confidence            999999986532  36777788776543

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.48  E-value=3.9e-12  Score=102.55  Aligned_cols=184  Identities=15%  Similarity=0.166  Sum_probs=118.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|+||+++++.|.++|++|++++|+....   .           ..++.++.+|+.++  +.++++.. ++|+|||+
T Consensus        11 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~-----------~~~~~~~~~D~~~~--~~~~~~~~~~id~lv~~   74 (235)
T PRK06550         11 TGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---L-----------SGNFHFLQLDLSDD--LEPLFDWVPSVDILCNT   74 (235)
T ss_pred             cCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---c-----------CCcEEEEECChHHH--HHHHHHhhCCCCEEEEC
Confidence            79999999999999999999999999875431   1           24678899999887  44444322 78999999


Q ss_pred             CCCC---------------------cccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhh
Q 023110           80 NGRE---------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (287)
Q Consensus        80 a~~~---------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k  132 (287)
                      ++..                     ..++.++++++    .  +..++|++||...+....          ....|..+|
T Consensus        75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~~sK  144 (235)
T PRK06550         75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGG----------GGAAYTASK  144 (235)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC----------CCcccHHHH
Confidence            9842                     11122333332    2  346899999976532111          112244788


Q ss_pred             HHHHHHhh-------hCCCcEEEEecCeeecCCCCCChh-HHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      ...+.+.+       ..++++++++||.+.++.....+. ...........+         ...+...+|+|.+++.++.
T Consensus       145 ~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~~l~s  215 (235)
T PRK06550        145 HALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETP---------IKRWAEPEEVAELTLFLAS  215 (235)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCC---------cCCCCCHHHHHHHHHHHcC
Confidence            87766542       358999999999998875322221 112122222211         1235668999999999986


Q ss_pred             CC--ccCCceEEecCCc
Q 023110          205 NE--KASRQVFNISGEK  219 (287)
Q Consensus       205 ~~--~~~~~~~~i~~~~  219 (287)
                      ..  ...|..+.+.++.
T Consensus       216 ~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        216 GKADYMQGTIVPIDGGW  232 (235)
T ss_pred             hhhccCCCcEEEECCce
Confidence            43  3367777777653

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.48  E-value=2.1e-12  Score=105.33  Aligned_cols=194  Identities=16%  Similarity=0.170  Sum_probs=124.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||.+++++|.++|++|++++|+........     ..+.....++.++.+|+.+.+++..+++..     ++|+
T Consensus        13 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   87 (253)
T PRK06172         13 TGGAAGIGRATALAFAREGAKVVVADRDAAGGEETV-----ALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDY   87 (253)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            699999999999999999999999999875422111     111112346889999999998888877632     5799


Q ss_pred             EEecCCCCcc---------------------cH----HHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD---------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~---------------------~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||+++....                     +.    +.++..+.  +..++|++||...+....           ....
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~-----------~~~~  156 (253)
T PRK06172         88 AFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAP-----------KMSI  156 (253)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-----------CCch
Confidence            9999986311                     01    12233332  456899999987654321           1223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh--hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      | .+|...+.+.+       ..++++..+.||.+-.+......  ............+.         ..+...+|++..
T Consensus       157 Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~p~~ia~~  227 (253)
T PRK06172        157 YAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPV---------GRIGKVEEVASA  227 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCC---------CCccCHHHHHHH
Confidence            4 88888876653       24799999999988665311100  01111111111111         124568999999


Q ss_pred             HHHHHcCC--ccCCceEEecCCc
Q 023110          199 FVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      +..++...  ...|+.+.+.++.
T Consensus       228 ~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        228 VLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             HHHHhCccccCcCCcEEEECCCc
Confidence            99998753  2367788887764

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.48  E-value=1.7e-12  Score=106.53  Aligned_cols=198  Identities=13%  Similarity=0.222  Sum_probs=125.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh-hcCCeEEEEecCCChHHHHhhhhc----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSA----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~----~~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.....+...     .+.. ...++.++.+|+.|++++.++++.    .++|+
T Consensus        14 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~   88 (263)
T PRK08339         14 TASSKGIGFGVARVLARAGADVILLSRNEENLKKARE-----KIKSESNVDVSYIVADLTKREDLERTVKELKNIGEPDI   88 (263)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCCcE
Confidence            7999999999999999999999999998654221110     0100 124688999999999988887763    25899


Q ss_pred             EEecCCCCcc------------------------cHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~------------------------~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||++|....                        .++.++..++  +..++|++||...+....          ....|.
T Consensus        89 lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~----------~~~~y~  158 (263)
T PRK08339         89 FFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIP----------NIALSN  158 (263)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCC----------cchhhH
Confidence            9999986311                        1334555554  457899999987532111          111133


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC----------hhHHHHHHHHcCCCccCCCCCCceeeeeeH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP----------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (287)
                      .+|...+.+.+       ..|+++..+.||.+..+.....          ...........  .++       ..-+...
T Consensus       159 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p-------~~r~~~p  229 (263)
T PRK08339        159 VVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAK--PIP-------LGRLGEP  229 (263)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhc--cCC-------cccCcCH
Confidence            77887766542       3589999999998866521000          00011111111  111       1134668


Q ss_pred             HHHHHHHHHHHcCC--ccCCceEEecCCcccC
Q 023110          193 KDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (287)
Q Consensus       193 ~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (287)
                      +|+|.++..++...  ...|+.+.+.++...|
T Consensus       230 ~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        230 EEIGYLVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             HHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence            99999999988643  2367788887765544

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.48  E-value=7.1e-13  Score=112.29  Aligned_cols=186  Identities=17%  Similarity=0.188  Sum_probs=122.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|.++|++|++++|+.....+..     ..+.....++.++.+|+.|.+++.++++..     .+|+
T Consensus        14 TGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~-----~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~   88 (334)
T PRK07109         14 TGASAGVGRATARAFARRGAKVVLLARGEEGLEALA-----AEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDT   88 (334)
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999865422111     111112346788999999999988876532     6899


Q ss_pred             EEecCCCCcc------------------------cHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~------------------------~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+++....                        .++.+++.+.  +..++|++||...+.....          ...|.
T Consensus        89 lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~----------~~~Y~  158 (334)
T PRK07109         89 WVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPL----------QSAYC  158 (334)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCc----------chHHH
Confidence            9999986321                        1334455554  4578999999887643211          11234


Q ss_pred             hhhHHHHHHhh---------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          130 KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 ~~k~~~E~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      .+|...+.+.+         ..++.+++++||.+.+|.     ... .........       .....+...+|+|++++
T Consensus       159 asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~-----~~~-~~~~~~~~~-------~~~~~~~~pe~vA~~i~  225 (334)
T PRK07109        159 AAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQ-----FDW-ARSRLPVEP-------QPVPPIYQPEVVADAIL  225 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCch-----hhh-hhhhccccc-------cCCCCCCCHHHHHHHHH
Confidence            88887665442         246899999999887762     111 111111110       11123567899999999


Q ss_pred             HHHcCCccCCceEEecC
Q 023110          201 QVLGNEKASRQVFNISG  217 (287)
Q Consensus       201 ~~~~~~~~~~~~~~i~~  217 (287)
                      .++.++.   ..+.++.
T Consensus       226 ~~~~~~~---~~~~vg~  239 (334)
T PRK07109        226 YAAEHPR---RELWVGG  239 (334)
T ss_pred             HHHhCCC---cEEEeCc
Confidence            9998763   4555654

>PRK12742 oxidoreductase; Provisional

Probab=99.48  E-value=2.7e-12  Score=103.62  Aligned_cols=188  Identities=18%  Similarity=0.202  Sum_probs=118.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|.||++++++|+++|++|+++.|+.....+.+.       .  ..++.++.+|+.|.+.+.++++.. ++|++||+
T Consensus        12 tGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-------~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   82 (237)
T PRK12742         12 LGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLA-------Q--ETGATAVQTDSADRDAVIDVVRKSGALDILVVN   82 (237)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHH-------H--HhCCeEEecCCCCHHHHHHHHHHhCCCcEEEEC
Confidence            7999999999999999999999888765332111111       0  124677889999998888887643 48999999


Q ss_pred             CCCCcc--------------------cHHHHH----HhCCCCccEEEEecceeeccCCCCCCCCCCCCCCCc-chhhhHH
Q 023110           80 NGREAD--------------------EVEPIL----DALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLN  134 (287)
Q Consensus        80 a~~~~~--------------------~~~~ll----~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~~~~k~~  134 (287)
                      +|....                    +...++    ..++...++|++||.....          .+..+.. |..+|..
T Consensus        83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~~~~Y~~sKaa  152 (237)
T PRK12742         83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR----------MPVAGMAAYAASKSA  152 (237)
T ss_pred             CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc----------CCCCCCcchHHhHHH
Confidence            986311                    111222    2223346899999865311          0111222 4489998


Q ss_pred             HHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCc
Q 023110          135 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       135 ~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (287)
                      .|.+++       ..++++.+++||.+..+..... .+ .........+.         ..+...+|+++++..++....
T Consensus       153 ~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~-~~-~~~~~~~~~~~---------~~~~~p~~~a~~~~~l~s~~~  221 (237)
T PRK12742        153 LQGMARGLARDFGPRGITINVVQPGPIDTDANPAN-GP-MKDMMHSFMAI---------KRHGRPEEVAGMVAWLAGPEA  221 (237)
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc-cH-HHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCccc
Confidence            887663       3579999999999977642111 01 11111111111         124578999999999886532


Q ss_pred             --cCCceEEecCC
Q 023110          208 --ASRQVFNISGE  218 (287)
Q Consensus       208 --~~~~~~~i~~~  218 (287)
                        ..|..+.+.++
T Consensus       222 ~~~~G~~~~~dgg  234 (237)
T PRK12742        222 SFVTGAMHTIDGA  234 (237)
T ss_pred             CcccCCEEEeCCC
Confidence              26777777665

>PRK09242 tropinone reductase; Provisional

Probab=99.48  E-value=4e-12  Score=103.95  Aligned_cols=194  Identities=18%  Similarity=0.247  Sum_probs=124.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh--cCCeEEEEecCCChHHHHhhhhc-----CCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~-----~~~   73 (287)
                      |||+|.||+++++.|.++|++|++++|+.+...+...     .+...  ..++.++.+|+.+.+++..+++.     .++
T Consensus        15 tGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   89 (257)
T PRK09242         15 TGASKGIGLAIAREFLGLGADVLIVARDADALAQARD-----ELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGL   89 (257)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            6999999999999999999999999998654221110     11111  24678899999999887776653     268


Q ss_pred             cEEEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           74 DVVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      |+|||++|...                    .+...++++    ++  +..++|++||...+.....          ...
T Consensus        90 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~----------~~~  159 (257)
T PRK09242         90 HILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRS----------GAP  159 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCC----------Ccc
Confidence            99999998621                    122233333    32  4578999999766532211          112


Q ss_pred             chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      |..+|...+.+++       ..++++..++||.+.++...... ............+.         .-+...+|++.++
T Consensus       160 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~  230 (257)
T PRK09242        160 YGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM---------RRVGEPEEVAAAV  230 (257)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence            4488888776653       35799999999999887532111 11222222222221         1233579999999


Q ss_pred             HHHHcCCc--cCCceEEecCC
Q 023110          200 VQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~  218 (287)
                      ..++....  ..|+.+.+.++
T Consensus       231 ~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        231 AFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             HHHhCcccccccCCEEEECCC
Confidence            99886432  25677777664

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.47  E-value=1.9e-12  Score=105.73  Aligned_cols=195  Identities=15%  Similarity=0.170  Sum_probs=125.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+........     ..+.....++.++.+|+.+++++.++++..     .+|+
T Consensus        17 tGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   91 (256)
T PRK06124         17 TGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAV-----AALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDI   91 (256)
T ss_pred             ECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            699999999999999999999999999865422111     111111346889999999998888777632     5799


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+++....                    +    .+.+++.+.  +..++|++||...+.....          ...|.
T Consensus        92 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~----------~~~Y~  161 (256)
T PRK06124         92 LVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAG----------DAVYP  161 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCC----------ccHhH
Confidence            9999986311                    1    222334443  5678999999764322111          11233


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChh-HHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      .+|...+.+.+       ..++++..++||.+.++....... ..+.......  .+       ...+++.+|++++++.
T Consensus       162 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~a~~~~~  232 (256)
T PRK06124        162 AAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQR--TP-------LGRWGRPEEIAGAAVF  232 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhc--CC-------CCCCCCHHHHHHHHHH
Confidence            77877766543       247999999999998874211111 1111122111  11       1236789999999999


Q ss_pred             HHcCCc--cCCceEEecCCc
Q 023110          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++....  -.|+.+.+.++.
T Consensus       233 l~~~~~~~~~G~~i~~dgg~  252 (256)
T PRK06124        233 LASPAASYVNGHVLAVDGGY  252 (256)
T ss_pred             HcCcccCCcCCCEEEECCCc
Confidence            997653  257777776653

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.47  E-value=4e-12  Score=103.23  Aligned_cols=192  Identities=19%  Similarity=0.265  Sum_probs=120.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcc-ccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d   74 (287)
                      |||+|+||++++++|+++|++|++..+.... ....+.     .+......+..+.+|+.|.+++.+++++     .++|
T Consensus         9 tG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   83 (246)
T PRK12938          9 TGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLE-----DQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEID   83 (246)
T ss_pred             ECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHH-----HHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999886543222 111111     1111123577789999999888877753     2689


Q ss_pred             EEEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +|||+++....                    +    ++.+++.+.  +..++|++||......           ......
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~  152 (246)
T PRK12938         84 VLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG-----------QFGQTN  152 (246)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCC-----------CCCChh
Confidence            99999986321                    1    223444443  5578999998654211           111223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      | .+|...+.+.+       ..++++..++||.+.+|.... ..+..+.......+.         ..+...+|++.++.
T Consensus       153 y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~v~~~~~  222 (246)
T PRK12938        153 YSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIPV---------RRLGSPDEIGSIVA  222 (246)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh-cChHHHHHHHhcCCc---------cCCcCHHHHHHHHH
Confidence            4 88887665542       357999999999998874211 112222222222111         12456899999999


Q ss_pred             HHHcCC--ccCCceEEecCC
Q 023110          201 QVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~  218 (287)
                      .++...  ...+..+.+.++
T Consensus       223 ~l~~~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        223 WLASEESGFSTGADFSLNGG  242 (246)
T ss_pred             HHcCcccCCccCcEEEECCc
Confidence            888653  235777777665

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.47  E-value=1.2e-12  Score=106.95  Aligned_cols=192  Identities=17%  Similarity=0.172  Sum_probs=118.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||.+++++|+++|++|++++|+.........          .....++++|+.+.+++.++++..     ++|+
T Consensus        13 tGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057         13 TGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAAD----------EVGGLFVPTDVTDEDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----------HcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211111          012367899999999888887642     6899


Q ss_pred             EEecCCCCcc----------------------c----HHHHHHhCC--CCccEEEEecc-eeeccCCCCCCCCCCCCCCC
Q 023110           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSA-GVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~ll~~~~--~~~~~i~~Ss~-~v~~~~~~~~~~e~~~~~~~  126 (287)
                      |||+++....                      +    ++.++..+.  +..++|++||. .+++...          ...
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~----------~~~  152 (255)
T PRK06057         83 AFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSAT----------SQI  152 (255)
T ss_pred             EEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCC----------CCc
Confidence            9999986310                      0    112333332  44688988885 3443211          112


Q ss_pred             cchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      .|..+|...+.+.+       ..++++++++||.+.+|.....+... ...... ..... .    ...+.+++|+++++
T Consensus       153 ~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~~~-~~~~~-~----~~~~~~~~~~a~~~  225 (255)
T PRK06057        153 SYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKD-PERAAR-RLVHV-P----MGRFAEPEEIAAAV  225 (255)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCC-HHHHHH-HHhcC-C----CCCCcCHHHHHHHH
Confidence            24478876554432       35799999999999887422111000 000000 00011 1    11467899999999


Q ss_pred             HHHHcCC--ccCCceEEecCCc
Q 023110          200 VQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      ..++...  ...++.+.+.++.
T Consensus       226 ~~l~~~~~~~~~g~~~~~~~g~  247 (255)
T PRK06057        226 AFLASDDASFITASTFLVDGGI  247 (255)
T ss_pred             HHHhCccccCccCcEEEECCCe
Confidence            8887643  2356777776653

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.47  E-value=9.9e-13  Score=107.75  Aligned_cols=193  Identities=13%  Similarity=0.178  Sum_probs=121.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+...        +...++.++++|+.+.+++.++++..     .+|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265         12 TGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAA--------SLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654221111        11246889999999999888877642     6899


Q ss_pred             EEecCCCCc-------------------ccH----HHHHHhC-CCCccEEEEecceeeccCCCCCCCCCCCCCCCcchhh
Q 023110           76 VYDINGREA-------------------DEV----EPILDAL-PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (287)
Q Consensus        76 vi~~a~~~~-------------------~~~----~~ll~~~-~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  131 (287)
                      +||+++...                   .+.    +.++..+ ++..++|++||...+.....          ...|..+
T Consensus        84 lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~----------~~~Y~as  153 (261)
T PRK08265         84 LVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTG----------RWLYPAS  153 (261)
T ss_pred             EEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC----------CchhHHH
Confidence            999998621                   111    2223333 23468999998664321111          1124488


Q ss_pred             hHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh--hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      |...+.+.+       ..++++..++||.+..+......  ..........  ..    .+  ...+...+|+|+++..+
T Consensus       154 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~--~~----~p--~~r~~~p~dva~~~~~l  225 (261)
T PRK08265        154 KAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAA--PF----HL--LGRVGDPEEVAQVVAFL  225 (261)
T ss_pred             HHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhc--cc----CC--CCCccCHHHHHHHHHHH
Confidence            888776653       25799999999988665311000  0000000000  00    00  11245689999999999


Q ss_pred             HcCCc--cCCceEEecCCc
Q 023110          203 LGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~  219 (287)
                      +....  ..|+.+.+.++.
T Consensus       226 ~s~~~~~~tG~~i~vdgg~  244 (261)
T PRK08265        226 CSDAASFVTGADYAVDGGY  244 (261)
T ss_pred             cCccccCccCcEEEECCCe
Confidence            87532  367788887764

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.47  E-value=2.5e-12  Score=104.30  Aligned_cols=190  Identities=17%  Similarity=0.211  Sum_probs=119.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|+.|++..|+.........        ....++.++.+|+.+.+++.+++++     .++|+
T Consensus        12 tGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936         12 TGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAA--------ELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH--------HhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999888887654221111        1124688899999999888877653     26899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEeccee-eccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||+++...                    .+...+++++    .  +..+||++||... ++...           ...|
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------~~~Y  152 (245)
T PRK12936         84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG-----------QANY  152 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC-----------Ccch
Confidence            999998631                    1222333332    1  5568999999654 33211           1124


Q ss_pred             hhhhHHHHHHh-------hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       129 ~~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      ..+|..++.+.       ...+++++.++||.+..+.... .... ....... ..+       ...+.+.+|+++++..
T Consensus       153 ~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~-~~~~-~~~~~~~-~~~-------~~~~~~~~~ia~~~~~  222 (245)
T PRK12936        153 CASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK-LNDK-QKEAIMG-AIP-------MKRMGTGAEVASAVAY  222 (245)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc-cChH-HHHHHhc-CCC-------CCCCcCHHHHHHHHHH
Confidence            46777555443       2357999999999876553211 1111 1111111 111       1124568999999988


Q ss_pred             HHcCCc--cCCceEEecCCc
Q 023110          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++....  ..|+.+++.++.
T Consensus       223 l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        223 LASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             HcCccccCcCCCEEEECCCc
Confidence            886532  267889988764

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.47  E-value=5.2e-12  Score=101.91  Aligned_cols=187  Identities=14%  Similarity=0.091  Sum_probs=120.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|.++|++|++++|+.....+.+.          ..++.++.+|+.|.+++..+++..     ++|+
T Consensus         8 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   77 (236)
T PRK06483          8 TGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR----------QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRA   77 (236)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH----------HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence            7999999999999999999999999998654221111          134778999999998887776542     4899


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--C--CccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      +||++|....                    +    ++.++..+.  +  ..++|++||.......          .....
T Consensus        78 lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----------~~~~~  147 (236)
T PRK06483         78 IIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGS----------DKHIA  147 (236)
T ss_pred             EEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCC----------CCCcc
Confidence            9999986211                    1    122333333  2  3589999886532111          11122


Q ss_pred             chhhhHHHHHHhhh------CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          128 RHKGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       128 ~~~~k~~~E~~~~~------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      |..+|...|.+++.      .++++..++||.+..+....   ...........++.         -+...+|+|+++..
T Consensus       148 Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~---~~~~~~~~~~~~~~---------~~~~~~~va~~~~~  215 (236)
T PRK06483        148 YAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD---AAYRQKALAKSLLK---------IEPGEEEIIDLVDY  215 (236)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC---HHHHHHHhccCccc---------cCCCHHHHHHHHHH
Confidence            44999998887641      25899999999875332111   11111222221211         12357999999999


Q ss_pred             HHcCCccCCceEEecCCc
Q 023110          202 VLGNEKASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~~~~~~~~i~~~~  219 (287)
                      ++....-.|..+.+.++.
T Consensus       216 l~~~~~~~G~~i~vdgg~  233 (236)
T PRK06483        216 LLTSCYVTGRSLPVDGGR  233 (236)
T ss_pred             HhcCCCcCCcEEEeCccc
Confidence            997555577888887764

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.47  E-value=4e-12  Score=103.64  Aligned_cols=193  Identities=13%  Similarity=0.131  Sum_probs=123.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||.+++++|.++|++|++++|+........     ..+.+....+.++++|+.+.+++..+++..     .+|+
T Consensus        14 tGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   88 (252)
T PRK07035         14 TGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVA-----DAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDI   88 (252)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999765422111     111111245778999999998887776632     5899


Q ss_pred             EEecCCCCc---------------------ccH----HHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA---------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+++...                     .+.    +.+++.+.  +..++|++||...+..           ..+.+.
T Consensus        89 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~  157 (252)
T PRK07035         89 LVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP-----------GDFQGI  157 (252)
T ss_pred             EEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC-----------CCCCcc
Confidence            999998521                     112    22333333  4578999998654321           112233


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      | .+|..++.+++       ..++++..+.||.+..+...... ............+         ...+...+|+|+++
T Consensus       158 Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~  228 (252)
T PRK07035        158 YSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIP---------LRRHAEPSEMAGAV  228 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCC---------CCCcCCHHHHHHHH
Confidence            4 89999887764       34799999999988765311100 0111112211111         11245689999999


Q ss_pred             HHHHcCCc--cCCceEEecCC
Q 023110          200 VQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~  218 (287)
                      ..++....  ..|..+.+.++
T Consensus       229 ~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        229 LYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             HHHhCccccCccCCEEEeCCC
Confidence            99886543  36777777664

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.47  E-value=4.2e-12  Score=103.47  Aligned_cols=196  Identities=18%  Similarity=0.237  Sum_probs=119.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEc-CCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc---------
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------   70 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~---------   70 (287)
                      |||+|+||.+++++|.++|++|++..+ +.........     .+......+..+.+|+.+.+++..+++.         
T Consensus        10 tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK12747         10 TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVY-----EIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRT   84 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH-----HHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhc
Confidence            799999999999999999999988754 3332111110     1111124567889999987766654431         


Q ss_pred             --CCccEEEecCCCCc--------------------ccHHHH----HHhCCCCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           71 --KGFDVVYDINGREA--------------------DEVEPI----LDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        71 --~~~d~vi~~a~~~~--------------------~~~~~l----l~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                        .++|++||+||...                    .++..+    +..+....++|++||...+.....          
T Consensus        85 g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  154 (252)
T PRK12747         85 GSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD----------  154 (252)
T ss_pred             CCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCC----------
Confidence              16999999998631                    112222    333333358999999876432111          


Q ss_pred             CCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ...|..+|..++.+++       ..++++..+.||.+.++.................  .    .  ....+.+.+|+|+
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~----~--~~~~~~~~~dva~  226 (252)
T PRK12747        155 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATT--I----S--AFNRLGEVEDIAD  226 (252)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHh--c----C--cccCCCCHHHHHH
Confidence            1124499999887663       3589999999999988742110000011111110  0    0  0123567999999


Q ss_pred             HHHHHHcCCc--cCCceEEecCCc
Q 023110          198 AFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++..++....  ..|+.+.+.++.
T Consensus       227 ~~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        227 TAAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             HHHHHcCccccCcCCcEEEecCCc
Confidence            9999886432  357778777653

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.46  E-value=1.4e-12  Score=105.54  Aligned_cols=168  Identities=19%  Similarity=0.158  Sum_probs=114.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC--CccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--~~d~vi~   78 (287)
                      |||+|++|++++++|+++|++|++++|+.....+ +        .....++.++.+|+.|.+++.++++..  .+|.++|
T Consensus         7 tGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~-~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~   77 (240)
T PRK06101          7 TGATSGIGKQLALDYAKQGWQVIACGRNQSVLDE-L--------HTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF   77 (240)
T ss_pred             EcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH-H--------HHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence            7999999999999999999999999998654211 1        111246888999999999999988853  4688888


Q ss_pred             cCCCC--------------------cccHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHH
Q 023110           79 INGRE--------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLN  134 (287)
Q Consensus        79 ~a~~~--------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~  134 (287)
                      +++..                    ..++.++++++.    +..++|++||....-.          .+....|..+|..
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~----------~~~~~~Y~asK~a  147 (240)
T PRK06101         78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA----------LPRAEAYGASKAA  147 (240)
T ss_pred             cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC----------CCCCchhhHHHHH
Confidence            88641                    112333444432    3457898888543110          0111224488998


Q ss_pred             HHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCc
Q 023110          135 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       135 ~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (287)
                      ++.+.+       ..+++++++|||.++++....             ....   .    ...+..+|+|+.++..++.+.
T Consensus       148 ~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~-------------~~~~---~----~~~~~~~~~a~~i~~~i~~~~  207 (240)
T PRK06101        148 VAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDK-------------NTFA---M----PMIITVEQASQEIRAQLARGK  207 (240)
T ss_pred             HHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCC-------------CCCC---C----CcccCHHHHHHHHHHHHhcCC
Confidence            887653       458999999999998873211             0000   0    123679999999999998754

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.46  E-value=1.3e-12  Score=106.75  Aligned_cols=171  Identities=16%  Similarity=0.182  Sum_probs=114.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|.++|++|++++|+.....+....     ... ..++.++.+|+.|++++.++++..     .+|+
T Consensus         8 tGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~-----~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          8 TGASSGIGQALAREYARQGATLGLVARRTDALQAFAAR-----LPK-AARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-----ccc-CCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            79999999999999999999999999986542211110     000 126889999999999888776531     4799


Q ss_pred             EEecCCCCc---------------------ccHHH----HHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA---------------------DEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~----ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||++|...                     .++..    ++.++.  +..++|++||...+....          ....|
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y  151 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLP----------GAGAY  151 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC----------CCcch
Confidence            999998631                     11222    333443  557899999866432111          11124


Q ss_pred             hhhhHHHHHHh-------hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       129 ~~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      ..+|...+.++       +..+++++++|||.+.++....           .  ..   ..    ...+..+|+|+.++.
T Consensus       152 ~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-----------~--~~---~~----~~~~~~~~~a~~~~~  211 (257)
T PRK07024        152 SASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH-----------N--PY---PM----PFLMDADRFAARAAR  211 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhc-----------C--CC---CC----CCccCHHHHHHHHHH
Confidence            48999888765       2458999999999998773110           0  00   00    013578999999999


Q ss_pred             HHcCCc
Q 023110          202 VLGNEK  207 (287)
Q Consensus       202 ~~~~~~  207 (287)
                      .+.++.
T Consensus       212 ~l~~~~  217 (257)
T PRK07024        212 AIARGR  217 (257)
T ss_pred             HHhCCC
Confidence            997654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.46  E-value=4.3e-12  Score=102.69  Aligned_cols=195  Identities=20%  Similarity=0.281  Sum_probs=121.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|++|++++++|+++|++|+++.|........+.    ........++.++.+|+.+++++.+++++     ..+|+
T Consensus         6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (242)
T TIGR01829         6 TGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWL----QEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDV   81 (242)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Confidence            7999999999999999999999999983222111110    00111124688999999999888777653     25899


Q ss_pred             EEecCCCCc--------------------cc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+++...                    .+    ++.++..++  +..++|++||.......          .....|.
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~----------~~~~~y~  151 (242)
T TIGR01829        82 LVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ----------FGQTNYS  151 (242)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC----------CCcchhH
Confidence            999998531                    11    222344444  55789999986432111          1111234


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+++       ..++++..++|+.+.++.... +............+.         ..+...+|+++++..+
T Consensus       152 ~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~l  221 (242)
T TIGR01829       152 AAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMA-MREDVLNSIVAQIPV---------GRLGRPEEIAAAVAFL  221 (242)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccc-cchHHHHHHHhcCCC---------CCCcCHHHHHHHHHHH
Confidence            78876665442       358999999999998874221 122222222222221         1234578999998877


Q ss_pred             HcCC--ccCCceEEecCCc
Q 023110          203 LGNE--KASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~  219 (287)
                      +..+  ...|+.+.+.++.
T Consensus       222 ~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       222 ASEEAGYITGATLSINGGL  240 (242)
T ss_pred             cCchhcCccCCEEEecCCc
Confidence            7543  2367788887764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.45  E-value=9.8e-12  Score=102.12  Aligned_cols=194  Identities=15%  Similarity=0.179  Sum_probs=123.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||.+++++|+++|++|+++.|+.....+...     .+.....++.++++|+.+.+++.+++++     ..+|+
T Consensus        16 tGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   90 (265)
T PRK07097         16 TGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLA-----AYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDI   90 (265)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----HHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            7999999999999999999999999888654321111     1111124688899999999988888764     25899


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEeccee-eccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||++|....                    +    ...++..+.  +..++|++||... ++..           ....|
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y  159 (265)
T PRK07097         91 LVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRE-----------TVSAY  159 (265)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCC-----------CCccH
Confidence            9999987311                    1    112333333  5578999998643 2211           11124


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-------hHHHHHHHHcCCCccCCCCCCceeeeeeHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      ..+|...+.+.+       ..++++..++||.+.++......       ...+...+....+         ...+...+|
T Consensus       160 ~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d  230 (265)
T PRK07097        160 AAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP---------AARWGDPED  230 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC---------ccCCcCHHH
Confidence            488888776653       35899999999999887421100       0001111111111         112456899


Q ss_pred             HHHHHHHHHcCC--ccCCceEEecCCc
Q 023110          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      +|.++..++...  ...|+.+.+.++.
T Consensus       231 va~~~~~l~~~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        231 LAGPAVFLASDASNFVNGHILYVDGGI  257 (265)
T ss_pred             HHHHHHHHhCcccCCCCCCEEEECCCc
Confidence            999999998753  2366777776653

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.45  E-value=5.9e-12  Score=102.69  Aligned_cols=194  Identities=18%  Similarity=0.163  Sum_probs=122.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||.+++++|+++|++|++++|+........     ..+.....++..+.+|+.|++++.++++.     .++|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   89 (253)
T PRK05867         15 TGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLA-----DEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDI   89 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865422111     11111124678899999999988887763     27999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--C-CccEEEEecceeeccCCCCCCCCCCCCCC-Cc
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KS  127 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~  127 (287)
                      +||++|...                    .+...+.++    +.  + ..++|++||....-..         .+.. ..
T Consensus        90 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------~~~~~~~  160 (253)
T PRK05867         90 AVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN---------VPQQVSH  160 (253)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC---------CCCCccc
Confidence            999998631                    112223333    22  2 2468888886431100         0111 22


Q ss_pred             chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      |..+|...+.+.+       ..++++..++||.+-.+.... . ...........+.         ..+...+|+|++++
T Consensus       161 Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~-~-~~~~~~~~~~~~~---------~r~~~p~~va~~~~  229 (253)
T PRK05867        161 YCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP-Y-TEYQPLWEPKIPL---------GRLGRPEELAGLYL  229 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc-c-hHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            4488988887663       358999999999987663211 1 1111111111111         12457899999999


Q ss_pred             HHHcCCc--cCCceEEecCCc
Q 023110          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (287)
                      .++....  -.|+.+.+.++.
T Consensus       230 ~L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        230 YLASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HHcCcccCCcCCCeEEECCCc
Confidence            9986432  367788887764

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.44  E-value=5.2e-12  Score=103.43  Aligned_cols=195  Identities=13%  Similarity=0.167  Sum_probs=125.7

Q ss_pred             CCcccchHHHHHHHHHHcCCe-EEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|.||++++++|.++|++ |++++|+........     ..+.+....+.++.+|+.+++++.++++..     ++|
T Consensus        12 tGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   86 (260)
T PRK06198         12 TGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQA-----AELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLD   86 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999 999999765422111     011111345778999999999888877642     689


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHh----CC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           75 VVYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      ++||+++...                    .+..+++++    +.  + ..++|++||...++....          ...
T Consensus        87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~----------~~~  156 (260)
T PRK06198         87 ALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPF----------LAA  156 (260)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCC----------cch
Confidence            9999998632                    112233333    22  1 357999999877643211          112


Q ss_pred             chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC------ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHH
Q 023110          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      |..+|..+|.+.+       ..++.++.++||.++++....      .....++.......         ....+++.+|
T Consensus       157 Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~  227 (260)
T PRK06198        157 YCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ---------PFGRLLDPDE  227 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC---------CccCCcCHHH
Confidence            4488988887654       246899999999998874210      00111111111111         1124578999


Q ss_pred             HHHHHHHHHcCCc--cCCceEEecCCc
Q 023110          195 LARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      +++++..++....  ..|+.+.+.++.
T Consensus       228 ~a~~~~~l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        228 VARAVAFLLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             HHHHHHHHcChhhCCccCceEeECCcc
Confidence            9999999886543  367788877754

>PRK08589 short chain dehydrogenase; Validated

Probab=99.44  E-value=7.7e-12  Score=103.13  Aligned_cols=198  Identities=17%  Similarity=0.145  Sum_probs=123.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+ ....+...     .+.+...++..+.+|+.+.+++..+++..     .+|+
T Consensus        12 tGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~-----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   85 (272)
T PRK08589         12 TGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVD-----KIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDV   85 (272)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHH-----HHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCE
Confidence            7999999999999999999999999998 43221111     11111246889999999998887777632     5899


Q ss_pred             EEecCCCCcc---------------------c----HHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD---------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||++|....                     +    ++.++..+. ...++|++||...+....          ....|.
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~  155 (272)
T PRK08589         86 LFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADL----------YRSGYN  155 (272)
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCC----------CCchHH
Confidence            9999986311                     0    122333333 336899999976543211          112344


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh---hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      .+|...+.+++       ..++++..+.||.+..+......   ...............   .+  ...+...+|+|+++
T Consensus       156 asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~va~~~  230 (272)
T PRK08589        156 AAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWM---TP--LGRLGKPEEVAKLV  230 (272)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhcc---CC--CCCCcCHHHHHHHH
Confidence            88988887663       35799999999998776321100   000000000000000   00  11245789999999


Q ss_pred             HHHHcCC--ccCCceEEecCCc
Q 023110          200 VQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      +.++...  ...|+.+.+.++.
T Consensus       231 ~~l~s~~~~~~~G~~i~vdgg~  252 (272)
T PRK08589        231 VFLASDDSSFITGETIRIDGGV  252 (272)
T ss_pred             HHHcCchhcCcCCCEEEECCCc
Confidence            9988643  2367777777764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.43  E-value=1.4e-11  Score=100.43  Aligned_cols=192  Identities=15%  Similarity=0.117  Sum_probs=122.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+......       ........++.++.+|+.+.+++.++++.     .++|+
T Consensus        14 tGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481         14 TGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQ-------AQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCchHHHHH-------HHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998886432110       11111134688899999999999888764     26899


Q ss_pred             EEecCCCCc--------------------ccHHH----HHHhCC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEP----ILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~----ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||++|...                    .+...    ++..+.  + ..++|++||...+.....          ...|
T Consensus        87 lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~----------~~~Y  156 (251)
T PRK12481         87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR----------VPSY  156 (251)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC----------Ccch
Confidence            999998631                    11222    233332  2 368999999876532211          1124


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      ..+|...+.+.+       ..++++..++||.+-.+...... ...........  ++.       ..+...+|+|.++.
T Consensus       157 ~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~p~-------~~~~~peeva~~~~  227 (251)
T PRK12481        157 TASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILER--IPA-------SRWGTPDDLAGPAI  227 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhc--CCC-------CCCcCHHHHHHHHH
Confidence            488988876653       46899999999998665311100 01111111111  111       12467899999999


Q ss_pred             HHHcCC--ccCCceEEecCC
Q 023110          201 QVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~  218 (287)
                      .++...  ...|..+.+.++
T Consensus       228 ~L~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        228 FLSSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             HHhCccccCcCCceEEECCC
Confidence            998642  236777777665

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.43  E-value=5.6e-12  Score=103.42  Aligned_cols=195  Identities=14%  Similarity=0.161  Sum_probs=121.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+... .....     .......++.++.+|+.+.+++.+++++.     .+|+
T Consensus        12 tG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~~-----~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   85 (263)
T PRK08226         12 TGALQGIGEGIARVFARHGANLILLDISPEI-EKLAD-----ELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDI   85 (263)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHH-----HHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998642 11111     01111245788999999999888877642     6899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+++...                    .+...++++    +.  +..++|++||......  .       ......|.
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--~-------~~~~~~Y~  156 (263)
T PRK08226         86 LVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV--A-------DPGETAYA  156 (263)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc--C-------CCCcchHH
Confidence            999998621                    122333333    22  4468999988543100  0       01111234


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-------ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      .+|...|.+.+       ..++++..++||.+.++....       .........+..+.+.         ..+...+|+
T Consensus       157 ~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~~v  227 (263)
T PRK08226        157 LTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL---------RRLADPLEV  227 (263)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC---------CCCCCHHHH
Confidence            88888776653       247999999999998763110       0011122232222111         124578999


Q ss_pred             HHHHHHHHcCC--ccCCceEEecCCc
Q 023110          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      |+++..++...  ..+|+.+.+.++.
T Consensus       228 a~~~~~l~~~~~~~~~g~~i~~dgg~  253 (263)
T PRK08226        228 GELAAFLASDESSYLTGTQNVIDGGS  253 (263)
T ss_pred             HHHHHHHcCchhcCCcCceEeECCCc
Confidence            99998887543  3367777777653

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.43  E-value=1.2e-11  Score=100.83  Aligned_cols=195  Identities=15%  Similarity=0.178  Sum_probs=121.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|.++|++|++++|+........     ..+......+.++++|+.|++++.++++..     .+|+
T Consensus         7 tG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (252)
T PRK07677          7 TGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAK-----LEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA   81 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            799999999999999999999999999865422111     111111346889999999998888877642     6899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----C--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||++|...                    .+..++++++    .  + ..++|++||...+...          .....|
T Consensus        82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~~~~~Y  151 (252)
T PRK07677         82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG----------PGVIHS  151 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC----------CCCcch
Confidence            999997521                    1122333333    2  2 3689999987542211          111224


Q ss_pred             hhhhHHHHHHhh--------hCCCcEEEEecCeeecCCCCCCh--hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          129 HKGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~~~k~~~E~~~~--------~~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      ..+|...+.+.+        .+++++..++||.+.++......  .....+.+.+..++         .-+...+|++++
T Consensus       152 ~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~  222 (252)
T PRK07677        152 AAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL---------GRLGTPEEIAGL  222 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC---------CCCCCHHHHHHH
Confidence            477877765543        24899999999998753211100  11122222222111         124568999999


Q ss_pred             HHHHHcCC--ccCCceEEecCCc
Q 023110          199 FVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      +..++...  ..+|..+.+.++.
T Consensus       223 ~~~l~~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        223 AYFLLSDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             HHHHcCccccccCCCEEEECCCe
Confidence            98887643  2367777777654

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.43  E-value=1.7e-12  Score=101.06  Aligned_cols=177  Identities=16%  Similarity=0.123  Sum_probs=117.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhh----cC-CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----AK-GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----~~-~~d~   75 (287)
                      ||||+-||.++++.|.+.|++|++..|+.+...+.-.++.       ...+..+..|++|.+++..+++    +. ++|+
T Consensus        12 TGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~-------~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221          12 TGASSGIGEATARALAEAGAKVVLAARREERLEALADEIG-------AGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             ecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhc-------cCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            7999999999999999999999999999887432211110       1368889999999988655554    22 6999


Q ss_pred             EEecCCCC--------------------ccc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCC--c
Q 023110           76 VYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK--S  127 (287)
Q Consensus        76 vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~--~  127 (287)
                      +||+||..                    +.+    ++.++..+.  +..++|.+||.+--            .+.|.  -
T Consensus        85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~------------~~y~~~~v  152 (246)
T COG4221          85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR------------YPYPGGAV  152 (246)
T ss_pred             EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc------------ccCCCCcc
Confidence            99999983                    222    334444443  44599999997741            12222  2


Q ss_pred             chhhhHHHHHHhh-------hCCCcEEEEecCeeecCC-CCCChh--HHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPL-NYNPVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      |..+|+.+..+..       ..+++++.+-||.+-... ..-.+.  ........            .....+..+|+|+
T Consensus       153 Y~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y------------~~~~~l~p~dIA~  220 (246)
T COG4221         153 YGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVY------------KGGTALTPEDIAE  220 (246)
T ss_pred             chhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHh------------ccCCCCCHHHHHH
Confidence            4488888776542       357999999999884431 100000  00011110            1235677999999


Q ss_pred             HHHHHHcCCcc
Q 023110          198 AFVQVLGNEKA  208 (287)
Q Consensus       198 ~~~~~~~~~~~  208 (287)
                      ++.++++.+..
T Consensus       221 ~V~~~~~~P~~  231 (246)
T COG4221         221 AVLFAATQPQH  231 (246)
T ss_pred             HHHHHHhCCCc
Confidence            99999998874

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.42  E-value=1.7e-12  Score=99.21  Aligned_cols=185  Identities=19%  Similarity=0.214  Sum_probs=127.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      .|+.||.|+++++.....++.|..+.|+..+......          ...+.++.+|.....-+...+.  ++..++-++
T Consensus        58 lggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw----------~~~vswh~gnsfssn~~k~~l~--g~t~v~e~~  125 (283)
T KOG4288|consen   58 LGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSW----------PTYVSWHRGNSFSSNPNKLKLS--GPTFVYEMM  125 (283)
T ss_pred             hcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCC----------CcccchhhccccccCcchhhhc--CCcccHHHh
Confidence            4899999999999999999999999999764221111          3678888888877665666666  777888776


Q ss_pred             CCC----------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHh-hhCCCcEE
Q 023110           81 GRE----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL-ESKGVNWT  147 (287)
Q Consensus        81 ~~~----------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~-~~~~~~~~  147 (287)
                      +..          .....+.+.+++  ++++|+|+|.... |-         .+.-|.+|+..|+++|..+ +.++.+.+
T Consensus       126 ggfgn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~-~~---------~~~i~rGY~~gKR~AE~Ell~~~~~rgi  195 (283)
T KOG4288|consen  126 GGFGNIILMDRINGTANINAVKAAAKAGVPRFVYISAHDF-GL---------PPLIPRGYIEGKREAEAELLKKFRFRGI  195 (283)
T ss_pred             cCccchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhc-CC---------CCccchhhhccchHHHHHHHHhcCCCce
Confidence            652          222333444433  9999999997432 11         1344567889999999776 56789999


Q ss_pred             EEecCeeecCCCCCC------hhHHHHHHHHcCC-----CccCCCCCCceeeeeeHHHHHHHHHHHHcCCccC
Q 023110          148 SLRPVYIYGPLNYNP------VEEWFFHRLKAGR-----PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       148 ilR~~~v~g~~~~~~------~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (287)
                      ++|||.+||-+.-..      .+...+.++.+.-     .+++.+  .-....+.++++|.+.+.+++.+...
T Consensus       196 ilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg--~l~~ppvnve~VA~aal~ai~dp~f~  266 (283)
T KOG4288|consen  196 ILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLG--PLLAPPVNVESVALAALKAIEDPDFK  266 (283)
T ss_pred             eeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccc--cccCCCcCHHHHHHHHHHhccCCCcC
Confidence            999999999753211      1111233333322     234433  35678899999999999999888743

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.42  E-value=1.9e-11  Score=100.20  Aligned_cols=195  Identities=16%  Similarity=0.165  Sum_probs=120.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||.+++++|.++|+.|++..|+.......+.    ..+.....++.++.+|+.|.+++.++++..     .+|+
T Consensus        13 tGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~----~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   88 (261)
T PRK08936         13 TGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVA----EEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDV   88 (261)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998886433111111    111111346778999999999888777532     5899


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCc-
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-  127 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-  127 (287)
                      +||+++....                    +    +..+++.+.  + ..++|++||...+.           +..+.. 
T Consensus        89 lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~  157 (261)
T PRK08936         89 MINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI-----------PWPLFVH  157 (261)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC-----------CCCCCcc
Confidence            9999986311                    0    122344443  2 36899999864321           112222 


Q ss_pred             chhhhHHHHHHh-------hhCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          128 RHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      |..+|...+.+.       ...+++++.++||.+..+.....+ ............+.         ..+...+|+++++
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~  228 (261)
T PRK08936        158 YAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPM---------GYIGKPEEIAAVA  228 (261)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence            347887665544       235899999999999887432111 11111111111111         1355689999999


Q ss_pred             HHHHcCC--ccCCceEEecCCc
Q 023110          200 VQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      ..++...  ...|..+.+.++.
T Consensus       229 ~~l~s~~~~~~~G~~i~~d~g~  250 (261)
T PRK08936        229 AWLASSEASYVTGITLFADGGM  250 (261)
T ss_pred             HHHcCcccCCccCcEEEECCCc
Confidence            9988653  2356666666553

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.42  E-value=4.3e-12  Score=102.86  Aligned_cols=173  Identities=16%  Similarity=0.143  Sum_probs=114.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC--CccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--~~d~vi~   78 (287)
                      |||+|+||.++++.|+++|++|++++|+.+........    .......+++++++|+.|.+++.+++++.  .+|.|||
T Consensus         7 tGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv~   82 (243)
T PRK07102          7 IGATSDIARACARRYAAAGARLYLAARDVERLERLADD----LRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVLI   82 (243)
T ss_pred             EcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHH----HHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEEE
Confidence            79999999999999999999999999987653211110    00011247889999999999888877642  5799999


Q ss_pred             cCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhh
Q 023110           79 INGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (287)
Q Consensus        79 ~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k  132 (287)
                      ++|...                    .++..++++    +.  +..++|++||.......          .....|..+|
T Consensus        83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~Y~~sK  152 (243)
T PRK07102         83 AVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR----------ASNYVYGSAK  152 (243)
T ss_pred             CCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC----------CCCcccHHHH
Confidence            987521                    112223333    32  46789999986432111          1112244888


Q ss_pred             HHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcC
Q 023110          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (287)
                      ...+.+.+       ..++++..++|+.+.++...             +..  ...     ...+..+|+|++++..+.+
T Consensus       153 ~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~-------------~~~--~~~-----~~~~~~~~~a~~i~~~~~~  212 (243)
T PRK07102        153 AALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTA-------------GLK--LPG-----PLTAQPEEVAKDIFRAIEK  212 (243)
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEecCcccChhhh-------------ccC--CCc-----cccCCHHHHHHHHHHHHhC
Confidence            87766542       45899999999999876210             001  000     1246689999999999986


Q ss_pred             Cc
Q 023110          206 EK  207 (287)
Q Consensus       206 ~~  207 (287)
                      +.
T Consensus       213 ~~  214 (243)
T PRK07102        213 GK  214 (243)
T ss_pred             CC
Confidence            53

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.41  E-value=3.6e-12  Score=104.62  Aligned_cols=195  Identities=16%  Similarity=0.228  Sum_probs=121.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||.+++++|+++|++|++++|+.+......     ..+.....++.++.+|+.+++++.++++..     ++|+
T Consensus        15 tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~   89 (264)
T PRK07576         15 VGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAV-----AQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDV   89 (264)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999865422111     111111245678899999999888877642     5899


Q ss_pred             EEecCCCC--------------------cccHHHHHHhC----C-CCccEEEEecceeeccCCCCCCCCCCCCCCCc-ch
Q 023110           76 VYDINGRE--------------------ADEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RH  129 (287)
Q Consensus        76 vi~~a~~~--------------------~~~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~~  129 (287)
                      +||+++..                    ..++.++++++    + ...++|++||...+..           ..... |.
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~-----------~~~~~~Y~  158 (264)
T PRK07576         90 LVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP-----------MPMQAHVC  158 (264)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC-----------CCCccHHH
Confidence            99998742                    12233344432    2 3358999999654311           11122 34


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhH-HHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      .+|...+.+++       ..+++++.++||.+.+........+ ........ ..++       ...+...+|+|++++.
T Consensus       159 asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~dva~~~~~  230 (264)
T PRK07576        159 AAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVA-QSVP-------LKRNGTKQDIANAALF  230 (264)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHH-hcCC-------CCCCCCHHHHHHHHHH
Confidence            88988887764       2578999999998865311000000 00111111 1111       1234668999999999


Q ss_pred             HHcCCc--cCCceEEecCCc
Q 023110          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++....  ..|..+.+.++.
T Consensus       231 l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        231 LASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             HcChhhcCccCCEEEECCCc
Confidence            997532  256677777754

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.41  E-value=1.9e-11  Score=98.78  Aligned_cols=193  Identities=15%  Similarity=0.156  Sum_probs=119.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||.+++++|.++|++|++++|+.......+.    ..+.....++.++.+|+.+.+++..+++.     ...|.
T Consensus         4 tGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         4 TGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVV----SAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999876433211111    11111235688999999999988877653     25799


Q ss_pred             EEecCCCC--------------------cccHHHHHHhC-----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGRE--------------------ADEVEPILDAL-----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~--------------------~~~~~~ll~~~-----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+++..                    ..++.++++++     +  +..++|++||...+....          ....|
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------~~~~Y  149 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR----------GQVNY  149 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC----------CCcch
Confidence            99998852                    11233344432     2  446899999965432111          11124


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      ..+|...+.+.+       ..+++++.++||.+.++.... ... ........-++         ..+...+|+++++..
T Consensus       150 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~-~~~~~~~~~~~---------~~~~~~~~va~~~~~  218 (239)
T TIGR01831       150 SAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAE-VEH-DLDEALKTVPM---------NRMGQPAEVASLAGF  218 (239)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchh-hhH-HHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence            477876655442       357999999999987764221 111 11112211111         123457999999999


Q ss_pred             HHcCCc--cCCceEEecCC
Q 023110          202 VLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~  218 (287)
                      ++....  ..|....+.++
T Consensus       219 l~~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       219 LMSDGASYVTRQVISVNGG  237 (239)
T ss_pred             HcCchhcCccCCEEEecCC
Confidence            987532  24555555554

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.41  E-value=1.6e-11  Score=100.60  Aligned_cols=194  Identities=13%  Similarity=0.114  Sum_probs=121.4

Q ss_pred             CCccc-chHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh-h-cCCeEEEEecCCChHHHHhhhhc-----CC
Q 023110            1 MGGTR-FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSA-----KG   72 (287)
Q Consensus         1 tGatG-~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~-~~~~~~i~~D~~d~~~~~~~~~~-----~~   72 (287)
                      |||+| -||+++++.|+++|++|++.+|+.........     .+.+ . ...+.++++|+.+.+++..+++.     ..
T Consensus        23 tG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   97 (262)
T PRK07831         23 TAAAGTGIGSATARRALEEGARVVISDIHERRLGETAD-----ELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGR   97 (262)
T ss_pred             ECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            69997 69999999999999999999987654221111     0110 0 13578899999999888877763     26


Q ss_pred             ccEEEecCCCCc--------------------ccHHHHHH----hCC--C-CccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           73 FDVVYDINGREA--------------------DEVEPILD----ALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        73 ~d~vi~~a~~~~--------------------~~~~~ll~----~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      +|++||++|...                    .+...+++    .+.  + ..++|++||...+...          ...
T Consensus        98 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----------~~~  167 (262)
T PRK07831         98 LDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ----------HGQ  167 (262)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC----------CCC
Confidence            899999998631                    11222222    222  2 4578888875432110          111


Q ss_pred             CcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      ..|..+|...+.+.+       ..++++..++||.+..|..................++         .-+...+|+|++
T Consensus       168 ~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~~va~~  238 (262)
T PRK07831        168 AHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAF---------GRAAEPWEVANV  238 (262)
T ss_pred             cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCC---------CCCcCHHHHHHH
Confidence            124489998887663       3579999999999988742211112222222222221         124557999999


Q ss_pred             HHHHHcCCc--cCCceEEecCC
Q 023110          199 FVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~  218 (287)
                      ++.++....  -.|+.+.+.++
T Consensus       239 ~~~l~s~~~~~itG~~i~v~~~  260 (262)
T PRK07831        239 IAFLASDYSSYLTGEVVSVSSQ  260 (262)
T ss_pred             HHHHcCchhcCcCCceEEeCCC
Confidence            999886532  36777766654

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.41  E-value=3.2e-12  Score=102.27  Aligned_cols=179  Identities=17%  Similarity=0.118  Sum_probs=121.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      ||||+.||.+++++|.++|++|+.+.|+.++..+...+    ...+..-.++++.+|+.+++++..+.++     ..+|+
T Consensus        12 TGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~----l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~Idv   87 (265)
T COG0300          12 TGASSGIGAELAKQLARRGYNLILVARREDKLEALAKE----LEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDV   87 (265)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHH----HHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccE
Confidence            79999999999999999999999999998874322211    1111124578999999999888877653     26999


Q ss_pred             EEecCCCCccc------------------------HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~~------------------------~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....+                        +..++.-+.  +..++|.++|..-|-+.+.          -..|+
T Consensus        88 LVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~----------~avY~  157 (265)
T COG0300          88 LVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPY----------MAVYS  157 (265)
T ss_pred             EEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcc----------hHHHH
Confidence            99999984221                        333444433  5678999999887532211          11244


Q ss_pred             hhhHHHHHH-------hhhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESV-------LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~-------~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|..+-.+       ++.+|+.++.+.||.+..++..           ..+....   .....+-++..+|+|+..+..
T Consensus       158 ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-----------~~~~~~~---~~~~~~~~~~~~~va~~~~~~  223 (265)
T COG0300         158 ATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-----------AKGSDVY---LLSPGELVLSPEDVAEAALKA  223 (265)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-----------ccccccc---cccchhhccCHHHHHHHHHHH
Confidence            888865433       2467899999999987665311           0111111   011235678899999999999


Q ss_pred             HcCCc
Q 023110          203 LGNEK  207 (287)
Q Consensus       203 ~~~~~  207 (287)
                      +.+.+
T Consensus       224 l~~~k  228 (265)
T COG0300         224 LEKGK  228 (265)
T ss_pred             HhcCC
Confidence            98865

>TIGR02415 23BDH acetoin reductases

Probab=99.40  E-value=4.9e-12  Score=103.21  Aligned_cols=198  Identities=19%  Similarity=0.187  Sum_probs=119.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||.+++++|++.|++|+++.|+........     ..+......+.++.+|+.|++++.+++++.     .+|+
T Consensus         6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         6 TGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETA-----KEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999854321111     011111346788999999999888876532     5799


Q ss_pred             EEecCCCCcc--------------------cHH----HHHHhCC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD--------------------EVE----PILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~----~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||+++....                    +..    .++..+.  + ..++|++||........          ....|
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y  150 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP----------ILSAY  150 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC----------CCcch
Confidence            9999986311                    111    2333333  2 36899998865432111          11123


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccC------CCCCCceeeeeeHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI------PGSGIQVTQLGHVKDL  195 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~D~  195 (287)
                      ..+|...+.+.+       ..++.+.+++||.+..+..     ..+..........++      +........+.+.+|+
T Consensus       151 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (254)
T TIGR02415       151 SSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMW-----EEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDV  225 (254)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhh-----hhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHH
Confidence            488888876653       2478999999998866531     111000000000000      0000001236778999


Q ss_pred             HHHHHHHHcCCcc--CCceEEecCC
Q 023110          196 ARAFVQVLGNEKA--SRQVFNISGE  218 (287)
Q Consensus       196 a~~~~~~~~~~~~--~~~~~~i~~~  218 (287)
                      ++++..++.....  .|..+.+.++
T Consensus       226 a~~~~~l~~~~~~~~~g~~~~~d~g  250 (254)
T TIGR02415       226 AGLVSFLASEDSDYITGQSILVDGG  250 (254)
T ss_pred             HHHHHhhcccccCCccCcEEEecCC
Confidence            9999999976532  4666665554

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.40  E-value=9e-12  Score=101.56  Aligned_cols=171  Identities=19%  Similarity=0.151  Sum_probs=112.6

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCcc-ccccCCCCChhhhhh-hcCCeEEEEecCCChHHHHhhhhc----CCc
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP-IAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSA----KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~-~~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~----~~~   73 (287)
                      |||+|.+|++++++|+++| ++|++++|+.+. ......     .+.. ...+++++.+|+.|.+++.++++.    .++
T Consensus        14 tGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~-----~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~i   88 (253)
T PRK07904         14 LGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVA-----QMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDV   88 (253)
T ss_pred             EcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHH-----HHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Confidence            7999999999999999995 999999998764 211111     1111 123688999999998876655542    379


Q ss_pred             cEEEecCCCCcc------c------------------HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           74 DVVYDINGREAD------E------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~~------~------------------~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      |++||++|....      .                  ++.+++.+.  +..++|++||...+...          .....
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~----------~~~~~  158 (253)
T PRK07904         89 DVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVR----------RSNFV  158 (253)
T ss_pred             CEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCC----------CCCcc
Confidence            999998876311      0                  123455554  56799999997542211          11112


Q ss_pred             chhhhHHHHHH-------hhhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          128 RHKGKLNTESV-------LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       128 ~~~~k~~~E~~-------~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      |..+|.....+       ++..++++++++||.+..+...            ....     .    ...+..+|+|+.++
T Consensus       159 Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~------------~~~~-----~----~~~~~~~~~A~~i~  217 (253)
T PRK07904        159 YGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA------------HAKE-----A----PLTVDKEDVAKLAV  217 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc------------cCCC-----C----CCCCCHHHHHHHHH
Confidence            44788766543       2456899999999999776210            0000     0    12467899999999


Q ss_pred             HHHcCCc
Q 023110          201 QVLGNEK  207 (287)
Q Consensus       201 ~~~~~~~  207 (287)
                      ..+.++.
T Consensus       218 ~~~~~~~  224 (253)
T PRK07904        218 TAVAKGK  224 (253)
T ss_pred             HHHHcCC
Confidence            9997764

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.40  E-value=3.9e-12  Score=104.21  Aligned_cols=176  Identities=17%  Similarity=0.138  Sum_probs=112.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc------CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~------~~~d   74 (287)
                      |||+|+||++++++|+++|++|++++|+.....+....     ..  ...+.++++|+.+.+++.++++.      .++|
T Consensus         7 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          7 TGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAE-----LG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH-----hc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            79999999999999999999999999987652211100     00  24688999999999888877662      2579


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEeccee-eccCCCCCCCCCCCCCCCc
Q 023110           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~  127 (287)
                      +|||++|...                    .++..++++    ++  +..++|++||... ++...           ...
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----------~~~  148 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPG-----------LAV  148 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCC-----------chh
Confidence            9999998732                    112233333    33  4578999998643 33211           112


Q ss_pred             chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      |..+|...+.+.+       ..++++++++||.+..+...... .........           ...-.+..+|+|++++
T Consensus       149 Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~~~~-----------~~~~~~~~~~va~~~~  216 (260)
T PRK08267        149 YSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTS-NEVDAGSTK-----------RLGVRLTPEDVAEAVW  216 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccccc-chhhhhhHh-----------hccCCCCHHHHHHHHH
Confidence            3488887766542       34799999999988654211100 000000000           0111355799999999


Q ss_pred             HHHcCC
Q 023110          201 QVLGNE  206 (287)
Q Consensus       201 ~~~~~~  206 (287)
                      .+++..
T Consensus       217 ~~~~~~  222 (260)
T PRK08267        217 AAVQHP  222 (260)
T ss_pred             HHHhCC
Confidence            999654

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.40  E-value=1.3e-11  Score=101.51  Aligned_cols=187  Identities=16%  Similarity=0.134  Sum_probs=119.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....              ...+.++++|+.|++++.++++..     .+|+
T Consensus        15 tG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (266)
T PRK06171         15 TGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG   80 (266)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998865421              236788999999999888877642     6899


Q ss_pred             EEecCCCCc-----------------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCC
Q 023110           76 VYDINGREA-----------------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCET  120 (287)
Q Consensus        76 vi~~a~~~~-----------------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~  120 (287)
                      +||++|...                             .+...+++++    .  +..++|++||...+.....      
T Consensus        81 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------  154 (266)
T PRK06171         81 LVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEG------  154 (266)
T ss_pred             EEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC------
Confidence            999998531                             1122233332    2  3357999999765422111      


Q ss_pred             CCCCCCcchhhhHHHHHHhh-------hCCCcEEEEecCeee-cCCCCCChh-----------HHHHHHHHcCCCccCCC
Q 023110          121 DTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIY-GPLNYNPVE-----------EWFFHRLKAGRPIPIPG  181 (287)
Q Consensus       121 ~~~~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~-g~~~~~~~~-----------~~~~~~~~~~~~~~~~~  181 (287)
                          ...|..+|...+.+++       ..++++.+++||.+- .+.......           ..+..........+   
T Consensus       155 ----~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---  227 (266)
T PRK06171        155 ----QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIP---  227 (266)
T ss_pred             ----CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccccccc---
Confidence                1123488888876653       358999999999874 221110000           00111111100111   


Q ss_pred             CCCceeeeeeHHHHHHHHHHHHcCCc--cCCceEEecCC
Q 023110          182 SGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       182 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~  218 (287)
                          ..-+...+|+|.++..++....  -.|+.+++.++
T Consensus       228 ----~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg  262 (266)
T PRK06171        228 ----LGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG  262 (266)
T ss_pred             ----CCCCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence                1124568999999999886432  26777777665

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.40  E-value=7.5e-12  Score=104.19  Aligned_cols=174  Identities=15%  Similarity=0.165  Sum_probs=114.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||++++++|.++|++|++++|+.+...+..     ..+......+.++.+|+.|.+++.++++.     .++|+
T Consensus        46 tGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~-----~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~  120 (293)
T PRK05866         46 TGASSGIGEAAAEQFARRGATVVAVARREDLLDAVA-----DRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDI  120 (293)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421111     11111124577899999999988888763     26899


Q ss_pred             EEecCCCCcc----------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      +||++|....                      +    ++.++..+.  +..++|++||.+.+....         +....
T Consensus       121 li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------p~~~~  191 (293)
T PRK05866        121 LINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS---------PLFSV  191 (293)
T ss_pred             EEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC---------CCcch
Confidence            9999986311                      1    112233332  567999999976543110         11122


Q ss_pred             chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      |..+|...+.+++       ..+++++.++||.+-.+...            ....  .  .   ....+..+++|+.++
T Consensus       192 Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~------------~~~~--~--~---~~~~~~pe~vA~~~~  252 (293)
T PRK05866        192 YNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA------------PTKA--Y--D---GLPALTADEAAEWMV  252 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccc------------cccc--c--c---CCCCCCHHHHHHHHH
Confidence            4489998876653       35899999999977555210            0000  0  0   112467899999999


Q ss_pred             HHHcCCc
Q 023110          201 QVLGNEK  207 (287)
Q Consensus       201 ~~~~~~~  207 (287)
                      ..++++.
T Consensus       253 ~~~~~~~  259 (293)
T PRK05866        253 TAARTRP  259 (293)
T ss_pred             HHHhcCC
Confidence            9997643

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.39  E-value=6.8e-12  Score=101.32  Aligned_cols=186  Identities=17%  Similarity=0.214  Sum_probs=117.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|++|+++++.|+++|++|++++|+.........     ... ...+++++.+|+.+++++.++++..     .+|.
T Consensus        11 tGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   84 (238)
T PRK05786         11 IGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKK-----TLS-KYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDG   84 (238)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHH-hcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6999999999999999999999999998654211100     000 0236788999999998888776532     4699


Q ss_pred             EEecCCCCcc------------------c----HHHHHHhCCCCccEEEEeccee-eccCCCCCCCCCCCCCCCc-chhh
Q 023110           76 VYDINGREAD------------------E----VEPILDALPNLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS-RHKG  131 (287)
Q Consensus        76 vi~~a~~~~~------------------~----~~~ll~~~~~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~-~~~~  131 (287)
                      +||+++....                  +    ...++..+....++|++||... ++.           ..+.. |..+
T Consensus        85 ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~~~Y~~s  153 (238)
T PRK05786         85 LVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA-----------SPDQLSYAVA  153 (238)
T ss_pred             EEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC-----------CCCchHHHHH
Confidence            9999875311                  1    1122222333357999998653 211           11222 3488


Q ss_pred             hHHHHHHh-------hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          132 KLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       132 k~~~E~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      |...+.++       ...+++++++||+.++++.....        ..+.  ....+     ..++..+|+++++..++.
T Consensus       154 K~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~--------~~~~--~~~~~-----~~~~~~~~va~~~~~~~~  218 (238)
T PRK05786        154 KAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER--------NWKK--LRKLG-----DDMAPPEDFAKVIIWLLT  218 (238)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh--------hhhh--hcccc-----CCCCCHHHHHHHHHHHhc
Confidence            88776544       23589999999999998732110        0000  10001     135678999999999986


Q ss_pred             CCc--cCCceEEecCC
Q 023110          205 NEK--ASRQVFNISGE  218 (287)
Q Consensus       205 ~~~--~~~~~~~i~~~  218 (287)
                      ...  ..|..+.+.++
T Consensus       219 ~~~~~~~g~~~~~~~~  234 (238)
T PRK05786        219 DEADWVDGVVIPVDGG  234 (238)
T ss_pred             ccccCccCCEEEECCc
Confidence            533  25666666554

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.39  E-value=1.2e-11  Score=101.31  Aligned_cols=193  Identities=18%  Similarity=0.212  Sum_probs=121.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||++++++|.++|++|++++|+.....+...     .+.. ..++.++++|+.|.+++.++++.     .++|+
T Consensus         6 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          6 TASSRGIGFNVARELLKKGARVVISSRNEENLEKALK-----ELKE-YGEVYAVKADLSDKDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             EcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHh-cCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654321111     0111 13678899999999988887753     26899


Q ss_pred             EEecCCCCcc----------------------c----HHHHHHhC-C--CCccEEEEecceeeccCCCCCCCCCCCCCCC
Q 023110           76 VYDINGREAD----------------------E----VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~ll~~~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (287)
                      +||++|....                      +    +..++..+ +  +..++|++||......           ..+.
T Consensus        80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~-----------~~~~  148 (259)
T PRK08340         80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP-----------MPPL  148 (259)
T ss_pred             EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC-----------CCCc
Confidence            9999985210                      0    11223322 2  3468999999876321           1112


Q ss_pred             cch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChh----------HH-HHHHHHcCCCccCCCCCCcee
Q 023110          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE----------EW-FFHRLKAGRPIPIPGSGIQVT  187 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~~~~  187 (287)
                      ..| .+|...+.+.+       ..++++..+.||.+-.+.......          .. ........  .+       ..
T Consensus       149 ~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p-------~~  219 (259)
T PRK08340        149 VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLER--TP-------LK  219 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhcc--CC-------cc
Confidence            234 78888776653       357899999999886663211000          00 00111111  11       11


Q ss_pred             eeeeHHHHHHHHHHHHcCC--ccCCceEEecCCc
Q 023110          188 QLGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      -+...+|+|+++..++...  .-+|.+..+.++.
T Consensus       220 r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        220 RTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             CCCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence            2456899999999998753  2367777777764

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.39  E-value=2.3e-11  Score=99.35  Aligned_cols=196  Identities=15%  Similarity=0.095  Sum_probs=121.3

Q ss_pred             CCccc--chHHHHHHHHHHcCCeEEEEEcCCccccccC--CCC----ChhhhhhhcCCeEEEEecCCChHHHHhhhhc--
Q 023110            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL--PGE----SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (287)
Q Consensus         1 tGatG--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--~~~----~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--   70 (287)
                      |||+|  .+|.+++++|.++|++|++++|++.......  ...    ...........++++.+|+.+.+++..+++.  
T Consensus        11 tGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   90 (256)
T PRK12748         11 TGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRVFYAVS   90 (256)
T ss_pred             eCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            69985  6999999999999999999999843210000  000    0011111134688999999999888777663  


Q ss_pred             ---CCccEEEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCC
Q 023110           71 ---KGFDVVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETD  121 (287)
Q Consensus        71 ---~~~d~vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (287)
                         ..+|+|||+++...                    .++..+++++    .  +..++|++||...+.....       
T Consensus        91 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~-------  163 (256)
T PRK12748         91 ERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPD-------  163 (256)
T ss_pred             HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCC-------
Confidence               25899999998631                    1223344332    2  3468999999766532111       


Q ss_pred             CCCCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHH
Q 023110          122 TVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       122 ~~~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                         -..|..+|...+.+++       ..+++++.++||.+..+....    ..........+    .     ..+...+|
T Consensus       164 ---~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~----~~~~~~~~~~~----~-----~~~~~~~~  227 (256)
T PRK12748        164 ---ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE----ELKHHLVPKFP----Q-----GRVGEPVD  227 (256)
T ss_pred             ---chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh----hHHHhhhccCC----C-----CCCcCHHH
Confidence               1124489999888753       257999999999876653211    11111111111    0     12345799


Q ss_pred             HHHHHHHHHcCC--ccCCceEEecCCc
Q 023110          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      +|+++..++...  ...+..+++.++.
T Consensus       228 ~a~~~~~l~~~~~~~~~g~~~~~d~g~  254 (256)
T PRK12748        228 AARLIAFLVSEEAKWITGQVIHSEGGF  254 (256)
T ss_pred             HHHHHHHHhCcccccccCCEEEecCCc
Confidence            999998887653  2357788887653

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.39  E-value=3.6e-11  Score=98.07  Aligned_cols=192  Identities=15%  Similarity=0.138  Sum_probs=120.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||++++++|.++|++|+++++......  .     ..+......+..+++|+.|.+++.+++++     .++|+
T Consensus        16 tG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~--~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~   88 (253)
T PRK08993         16 TGCDTGLGQGMALGLAEAGCDIVGINIVEPTET--I-----EQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI   88 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEecCcchHHH--H-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999998877543210  0     01111124578899999999888888764     26899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||++|...                    .+...++++    +.  + ..++|++||...+......          ..|
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------~~Y  158 (253)
T PRK08993         89 LVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRV----------PSY  158 (253)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCC----------cch
Confidence            999998631                    112223333    22  2 2579999998766432211          124


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      ..+|...+.+.+       ..++++..++||.+-.+...... .........+  .++.       .-+...+|+|++++
T Consensus       159 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~--~~p~-------~r~~~p~eva~~~~  229 (253)
T PRK08993        159 TASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILD--RIPA-------GRWGLPSDLMGPVV  229 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHh--cCCC-------CCCcCHHHHHHHHH
Confidence            488988776653       35899999999999766311100 0011111111  1111       12556899999999


Q ss_pred             HHHcCCc--cCCceEEecCC
Q 023110          201 QVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~  218 (287)
                      .++....  ..|..+.+.++
T Consensus       230 ~l~s~~~~~~~G~~~~~dgg  249 (253)
T PRK08993        230 FLASSASDYINGYTIAVDGG  249 (253)
T ss_pred             HHhCccccCccCcEEEECCC
Confidence            9986532  25666666554

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.38  E-value=3.9e-12  Score=105.03  Aligned_cols=136  Identities=18%  Similarity=0.139  Sum_probs=95.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|++|++++++|.++|++|++++|+...... +.          ..+++++.+|+.+.+.+.++++..     ++|+
T Consensus         7 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~----------~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          7 TGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-LA----------AAGFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----------HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654221 11          135778999999998888777542     6899


Q ss_pred             EEecCCCCcc--------------------cHHHHHHh----CC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcchh
Q 023110           76 VYDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  130 (287)
                      |||++|....                    +...++++    ++ +..++|++||...+....          ....|..
T Consensus        76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~~  145 (274)
T PRK05693         76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTP----------FAGAYCA  145 (274)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCC----------CccHHHH
Confidence            9999986311                    12223333    33 446799998865432111          1112348


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecC
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~  157 (287)
                      +|...+.+.+       ..++++++++||.+.++
T Consensus       146 sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~  179 (274)
T PRK05693        146 SKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ  179 (274)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence            8888776542       36899999999999765

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.38  E-value=5.6e-12  Score=105.74  Aligned_cols=153  Identities=15%  Similarity=0.063  Sum_probs=99.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh--hcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||++++++|+++|++|++++|+.........     .+..  ....+.++.+|+.|.+++.+++++.     ++
T Consensus        22 tGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i   96 (306)
T PRK06197         22 TGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAA-----RITAATPGADVTLQELDLTSLASVRAAADALRAAYPRI   96 (306)
T ss_pred             cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCC
Confidence            7999999999999999999999999998654221111     0110  0246788999999999888777632     58


Q ss_pred             cEEEecCCCC------------------ccc----HHHHHHhCC--CCccEEEEecceee--ccCCCCCCCCCCCCCCCc
Q 023110           74 DVVYDINGRE------------------ADE----VEPILDALP--NLEQFIYCSSAGVY--LKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~--~~~~~~~~~e~~~~~~~~  127 (287)
                      |+|||+||..                  ..+    +..+++.++  +..++|++||...+  +........+.....+..
T Consensus        97 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~  176 (306)
T PRK06197         97 DLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVA  176 (306)
T ss_pred             CEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCCcHH
Confidence            9999999852                  111    445666665  45799999998643  221111111112223333


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEE--EecCeeecCC
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTS--LRPVYIYGPL  158 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~i--lR~~~v~g~~  158 (287)
                      .| .+|...+.+.+       ..++++.+  +.||.+..+.
T Consensus       177 ~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        177 AYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            45 89988876653       23555544  4799887663

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.38  E-value=6.8e-12  Score=106.01  Aligned_cols=152  Identities=16%  Similarity=0.183  Sum_probs=98.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||.+++++|+++|++|++++|+..........     +......+.++.+|+.|.+++.++++.     .++|+
T Consensus        12 TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~-----l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~   86 (322)
T PRK07453         12 TGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQE-----LGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDA   86 (322)
T ss_pred             EcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-----hhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccE
Confidence            79999999999999999999999999986542211110     000124688999999999988887764     25999


Q ss_pred             EEecCCCCc---------------------cc----HHHHHHhCC--C--CccEEEEecceeeccC----CCCCC--C--
Q 023110           76 VYDINGREA---------------------DE----VEPILDALP--N--LEQFIYCSSAGVYLKS----DLLPH--C--  118 (287)
Q Consensus        76 vi~~a~~~~---------------------~~----~~~ll~~~~--~--~~~~i~~Ss~~v~~~~----~~~~~--~--  118 (287)
                      |||+||...                     .+    ++.++..++  +  ..|+|++||...+...    ...+.  +  
T Consensus        87 li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~  166 (322)
T PRK07453         87 LVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLG  166 (322)
T ss_pred             EEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchh
Confidence            999998521                     01    122333333  2  3599999997664311    00000  0  


Q ss_pred             ----------------CCCCCCCCcch-hhhHHHHHHh----hh----CCCcEEEEecCeeecC
Q 023110          119 ----------------ETDTVDPKSRH-KGKLNTESVL----ES----KGVNWTSLRPVYIYGP  157 (287)
Q Consensus       119 ----------------e~~~~~~~~~~-~~k~~~E~~~----~~----~~~~~~ilR~~~v~g~  157 (287)
                                      +..+..|...| .+|...+.+.    +.    .++.++.++||.|++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  230 (322)
T PRK07453        167 DLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT  230 (322)
T ss_pred             hhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence                            11122344445 9998765433    22    4799999999999863

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.37  E-value=1.6e-11  Score=99.77  Aligned_cols=171  Identities=18%  Similarity=0.181  Sum_probs=113.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh--cCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+|.||++++++|+++|++|++++|+.........     .+...  ...+.++.+|+.+.+++.+++++.     ++
T Consensus         8 tGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   82 (248)
T PRK08251          8 TGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKA-----ELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGL   82 (248)
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999998755221110     00000  236788999999998887776632     68


Q ss_pred             cEEEecCCCCcc--------------------cHHHHHH----hCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           74 DVVYDINGREAD--------------------EVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~ll~----~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      |+|||++|....                    +...+++    .++  +..++|++||.......          +.+..
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~  152 (248)
T PRK08251         83 DRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL----------PGVKA  152 (248)
T ss_pred             CEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC----------CCCcc
Confidence            999999986311                    1222233    332  56789999996543211          11122


Q ss_pred             -chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          128 -RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 -~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                       |..+|..++.+.+       ..+++++.++||.+.++...         .  .+.          ....++.+|.|+.+
T Consensus       153 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~---------~--~~~----------~~~~~~~~~~a~~i  211 (248)
T PRK08251        153 AYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA---------K--AKS----------TPFMVDTETGVKAL  211 (248)
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh---------c--ccc----------CCccCCHHHHHHHH
Confidence             4488888776552       34789999999998765210         0  000          11246789999999


Q ss_pred             HHHHcCCc
Q 023110          200 VQVLGNEK  207 (287)
Q Consensus       200 ~~~~~~~~  207 (287)
                      +..+++..
T Consensus       212 ~~~~~~~~  219 (248)
T PRK08251        212 VKAIEKEP  219 (248)
T ss_pred             HHHHhcCC
Confidence            99997654

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.37  E-value=4.2e-11  Score=98.35  Aligned_cols=197  Identities=19%  Similarity=0.214  Sum_probs=122.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh--cCCeEEEEecCCChHHHHhhhhc-----CCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~-----~~~   73 (287)
                      |||+|.||++++++|+++|++|++++|+.....+...     .+.+.  ..++..+.+|+.|.+++.++++.     ..+
T Consensus        14 tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (265)
T PRK07062         14 TGGSSGIGLATVELLLEAGASVAICGRDEERLASAEA-----RLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGV   88 (265)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----HHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999998755321111     01111  13577899999999888777653     258


Q ss_pred             cEEEecCCCCcc------------------------cHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           74 DVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      |++||++|....                        .++.++..++  +..++|++||...+....          ....
T Consensus        89 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~  158 (265)
T PRK07062         89 DMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEP----------HMVA  158 (265)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCC----------CchH
Confidence            999999986310                        1233444444  456999999976542211          1112


Q ss_pred             chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChh---------HHHHHHHHcCCCccCCCCCCceeeeee
Q 023110          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE---------EWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                      |..+|...+.+.+       ..++++..++||.+..+.....+.         ..+.........++       ..-+..
T Consensus       159 y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~~  231 (265)
T PRK07062        159 TSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIP-------LGRLGR  231 (265)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCC-------cCCCCC
Confidence            3367776655442       458999999999987653111000         00001110001111       112456


Q ss_pred             HHHHHHHHHHHHcCC--ccCCceEEecCCc
Q 023110          192 VKDLARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      .+|+|.++..++...  ...|+.+.+.++.
T Consensus       232 p~~va~~~~~L~s~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        232 PDEAARALFFLASPLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             HHHHHHHHHHHhCchhcccccceEEEcCce
Confidence            899999999988642  2367788877763

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.37  E-value=1.6e-11  Score=103.74  Aligned_cols=179  Identities=17%  Similarity=0.206  Sum_probs=115.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||++++++|.++|++|++++|+.....+...     ........+.++.+|+.|.+++.++++.     ..+|+
T Consensus        13 TGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~-----~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   87 (330)
T PRK06139         13 TGASSGIGQATAEAFARRGARLVLAARDEEALQAVAE-----ECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDV   87 (330)
T ss_pred             cCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998765321111     1111134677889999999988887753     26899


Q ss_pred             EEecCCCCcc--------------------cH----HHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||++|....                    +.    +.++..+.  +..++|++||...+...+          ....|.
T Consensus        88 lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p----------~~~~Y~  157 (330)
T PRK06139         88 WVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQP----------YAAAYS  157 (330)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCC----------CchhHH
Confidence            9999986311                    12    22333333  446899999876543211          112244


Q ss_pred             hhhHHHHHHh-------hh-CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 KGKLNTESVL-------ES-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 ~~k~~~E~~~-------~~-~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      .+|...+.+.       .. .++.++.+.||.+.+|......      .. .+...      .....+++.+|+|++++.
T Consensus       158 asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~------~~-~~~~~------~~~~~~~~pe~vA~~il~  224 (330)
T PRK06139        158 ASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA------NY-TGRRL------TPPPPVYDPRRVAKAVVR  224 (330)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccc------cc-ccccc------cCCCCCCCHHHHHHHHHH
Confidence            8888655433       12 3799999999999887421100      00 01111      011235789999999999


Q ss_pred             HHcCCc
Q 023110          202 VLGNEK  207 (287)
Q Consensus       202 ~~~~~~  207 (287)
                      ++.+++
T Consensus       225 ~~~~~~  230 (330)
T PRK06139        225 LADRPR  230 (330)
T ss_pred             HHhCCC
Confidence            998765

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.36  E-value=2.5e-11  Score=98.85  Aligned_cols=189  Identities=13%  Similarity=0.099  Sum_probs=115.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC---------
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---------   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~---------   71 (287)
                      |||+|+||++++++|+++|++|++++|+..+....+.+       ....+++++.+|+.+.+++.+++++.         
T Consensus         7 tGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK06924          7 TGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE-------QYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV   79 (251)
T ss_pred             ecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh-------ccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence            79999999999999999999999999986331111110       01246889999999999888877632         


Q ss_pred             CccEEEecCCCC---------------------ccc----HHHHHHhCC---CCccEEEEecceeeccCCCCCCCCCCCC
Q 023110           72 GFDVVYDINGRE---------------------ADE----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        72 ~~d~vi~~a~~~---------------------~~~----~~~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (287)
                      +..++||++|..                     ..+    ++.++..+.   +..++|++||...+.           +.
T Consensus        80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~  148 (251)
T PRK06924         80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN-----------PY  148 (251)
T ss_pred             CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC-----------CC
Confidence            112688887652                     111    333444443   246899999976532           11


Q ss_pred             CCCcch-hhhHHHHHHhh---------hCCCcEEEEecCeeecCCCCC-----ChhHHHHHHHHcCCCccCCCCCCceee
Q 023110          124 DPKSRH-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQ  188 (287)
Q Consensus       124 ~~~~~~-~~k~~~E~~~~---------~~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (287)
                      .+...| .+|...+.+++         ..++++..++||.+-.+....     ..............     .    ...
T Consensus       149 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~  219 (251)
T PRK06924        149 FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLK-----E----EGK  219 (251)
T ss_pred             CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHh-----h----cCC
Confidence            222334 88998887663         246889999999876542100     00000000000000     0    012


Q ss_pred             eeeHHHHHHHHHHHHcC-CccCCceEEec
Q 023110          189 LGHVKDLARAFVQVLGN-EKASRQVFNIS  216 (287)
Q Consensus       189 ~i~~~D~a~~~~~~~~~-~~~~~~~~~i~  216 (287)
                      +...+|+|+.++.++.. ....|+.+.+.
T Consensus       220 ~~~~~dva~~~~~l~~~~~~~~G~~~~v~  248 (251)
T PRK06924        220 LLSPEYVAKALRNLLETEDFPNGEVIDID  248 (251)
T ss_pred             cCCHHHHHHHHHHHHhcccCCCCCEeehh
Confidence            47789999999999876 33355555443

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.36  E-value=2.1e-11  Score=100.05  Aligned_cols=192  Identities=17%  Similarity=0.172  Sum_probs=121.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+........        ......+.++++|+.+.+++..+++..     ++|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200         12 TGGGSGIGRALVERFLAEGARVAVLERSAEKLASLR--------QRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865422111        111245788999999998888777632     6899


Q ss_pred             EEecCCCCcc-------------------------cHH----HHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           76 VYDINGREAD-------------------------EVE----PILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        76 vi~~a~~~~~-------------------------~~~----~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      +||++|....                         +..    .++..++ ...++|++||...+.....          .
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------~  153 (263)
T PRK06200         84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGG----------G  153 (263)
T ss_pred             EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC----------C
Confidence            9999986210                         111    2222232 3357999999776532111          1


Q ss_pred             CcchhhhHHHHHHhh------hCCCcEEEEecCeeecCCCCCC-h---------hHHHHHHHHcCCCccCCCCCCceeee
Q 023110          126 KSRHKGKLNTESVLE------SKGVNWTSLRPVYIYGPLNYNP-V---------EEWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       126 ~~~~~~k~~~E~~~~------~~~~~~~ilR~~~v~g~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                      ..|..+|...+.+.+      ..++++..+.||.+..+..... .         .+.........  .+       ..-+
T Consensus       154 ~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p-------~~r~  224 (263)
T PRK06200        154 PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAI--TP-------LQFA  224 (263)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcC--CC-------CCCC
Confidence            124489998887663      1258999999999876531100 0         00001111111  11       1235


Q ss_pred             eeHHHHHHHHHHHHcCC---ccCCceEEecCCc
Q 023110          190 GHVKDLARAFVQVLGNE---KASRQVFNISGEK  219 (287)
Q Consensus       190 i~~~D~a~~~~~~~~~~---~~~~~~~~i~~~~  219 (287)
                      ...+|+|.+++.++...   ...|+.+.+.++.
T Consensus       225 ~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~  257 (263)
T PRK06200        225 PQPEDHTGPYVLLASRRNSRALTGVVINADGGL  257 (263)
T ss_pred             CCHHHHhhhhhheecccccCcccceEEEEcCce
Confidence            66899999999988644   2367788877663

>PRK06484 short chain dehydrogenase; Validated

Probab=99.36  E-value=2.2e-11  Score=109.63  Aligned_cols=192  Identities=16%  Similarity=0.208  Sum_probs=124.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||.+++++|.++|++|++++|+........        .+....+..+.+|+.|++++.++++.     ..+|+
T Consensus       275 tGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        275 TGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLA--------EALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111        11124567789999999988887764     25899


Q ss_pred             EEecCCCCc---------------------ccHHHHHH----hCCCCccEEEEecceeeccCCCCCCCCCCCCCCCcchh
Q 023110           76 VYDINGREA---------------------DEVEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~ll~----~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  130 (287)
                      +||+||...                     .++..+.+    .+.+..++|++||...+....          ....|..
T Consensus       347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~a  416 (520)
T PRK06484        347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALP----------PRNAYCA  416 (520)
T ss_pred             EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCC----------CCchhHH
Confidence            999998631                     11222233    333446899999976542211          1112448


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh--hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      +|...+.+.+       ..++++..+.||.+.++......  .........+..+.         ..+...+|+|++++.
T Consensus       417 sKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dia~~~~~  487 (520)
T PRK06484        417 SKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL---------GRLGDPEEVAEAIAF  487 (520)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence            9998887653       34799999999999876321100  00011111111111         124568999999999


Q ss_pred             HHcCCc--cCCceEEecCCc
Q 023110          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++....  ..|+.+.+.++.
T Consensus       488 l~s~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        488 LASPAASYVNGATLTVDGGW  507 (520)
T ss_pred             HhCccccCccCcEEEECCCc
Confidence            986532  367788887764

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.36  E-value=1.2e-11  Score=100.26  Aligned_cols=136  Identities=16%  Similarity=0.125  Sum_probs=97.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc---------C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------K   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~---------~   71 (287)
                      |||+|+||++++++|+++|++|++++|+.....  .        .....++.++.+|+.+.+++.+++.+         .
T Consensus         7 tGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          7 TGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--A--------AAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             ecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--h--------hccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            799999999999999999999999999865411  0        01124688899999999988885542         2


Q ss_pred             CccEEEecCCCCc---------------------cc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           72 GFDVVYDINGREA---------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        72 ~~d~vi~~a~~~~---------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      .+|++||+++...                     .+    ++.+++.+.  +..++|++||...+...           .
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~  145 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAY-----------A  145 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCC-----------C
Confidence            5789999987631                     11    233444444  45799999997764321           1


Q ss_pred             CCcch-hhhHHHHHHhh------hCCCcEEEEecCeeecC
Q 023110          125 PKSRH-KGKLNTESVLE------SKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       125 ~~~~~-~~k~~~E~~~~------~~~~~~~ilR~~~v~g~  157 (287)
                      +...| .+|..+|.+++      ..++++..++||.+-.+
T Consensus       146 ~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        146 GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence            22334 89998888774      24789999999987544

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.36  E-value=4.9e-11  Score=97.68  Aligned_cols=196  Identities=14%  Similarity=0.120  Sum_probs=119.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhh-hhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||++.||++++++|+++|++|+++.|+.....+.+.    ..+. .....+.++.+|+.|++++.++++..     ++|
T Consensus        14 tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   89 (260)
T PRK08416         14 SGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIA----EDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVD   89 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCcc
Confidence            7999999999999999999999988765432111110    0000 01246789999999999888877642     689


Q ss_pred             EEEecCCCCc---------------cc---------------HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCC
Q 023110           75 VVYDINGREA---------------DE---------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (287)
Q Consensus        75 ~vi~~a~~~~---------------~~---------------~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (287)
                      ++||+|+...               ..               ++.++..+.  +..++|++||...+...          
T Consensus        90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  159 (260)
T PRK08416         90 FFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYI----------  159 (260)
T ss_pred             EEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCC----------
Confidence            9999996420               00               122333343  34689999996532110          


Q ss_pred             CCCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHH
Q 023110          123 VDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       123 ~~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      +....|..+|..++.+.+       ..++++..+.||.+-.+..... -............+.         .-+...+|
T Consensus       160 ~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~~  230 (260)
T PRK08416        160 ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPL---------NRMGQPED  230 (260)
T ss_pred             CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCC---------CCCCCHHH
Confidence            111124488998887663       3589999999998755421100 001111111111111         12466899


Q ss_pred             HHHHHHHHHcCCc--cCCceEEecCCc
Q 023110          195 LARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      +|.+++.++....  ..|+.+.+.++.
T Consensus       231 va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        231 LAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             HHHHHHHHcChhhhcccCcEEEEcCCe
Confidence            9999999986532  256777776653

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.35  E-value=1.5e-11  Score=102.56  Aligned_cols=184  Identities=22%  Similarity=0.216  Sum_probs=116.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||.++++.|.++|++|++++|+.....+....+     . ....+..+.+|+.|.+++.+++++     ..+|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l-----~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   88 (296)
T PRK05872         15 TGAARGIGAELARRLHARGAKLALVDLEEAELAALAAEL-----G-GDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDV   88 (296)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----c-CCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999866532111100     0 013456677999999888877653     26899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcchh
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  130 (287)
                      |||++|...                    .+...++++    +. ...++|++||...+.....          ...|..
T Consensus        89 vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~Y~a  158 (296)
T PRK05872         89 VVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPG----------MAAYCA  158 (296)
T ss_pred             EEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCC----------chHHHH
Confidence            999998631                    112223333    22 3458999999776532211          112448


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhH-HHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      +|...+.+.+       ..++.+.++.||.+..+........ ..........+.+       ...++..+|+|+++..+
T Consensus       159 sKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~~va~~i~~~  231 (296)
T PRK05872        159 SKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWP-------LRRTTSVEKCAAAFVDG  231 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCc-------ccCCCCHHHHHHHHHHH
Confidence            8998887663       3579999999998876531110000 1111111111111       12356799999999999


Q ss_pred             HcCCc
Q 023110          203 LGNEK  207 (287)
Q Consensus       203 ~~~~~  207 (287)
                      +.+..
T Consensus       232 ~~~~~  236 (296)
T PRK05872        232 IERRA  236 (296)
T ss_pred             HhcCC
Confidence            87643

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.34  E-value=1.6e-11  Score=112.94  Aligned_cols=203  Identities=17%  Similarity=0.213  Sum_probs=124.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh--hcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||++++++|+++|++|++++|+.........     .+..  ....+..+++|+.|.+++.+++++.     ++
T Consensus       420 TGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~-----~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~i  494 (676)
T TIGR02632       420 TGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAA-----EINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGV  494 (676)
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----HHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999998654211110     0000  0135678999999999998887643     68


Q ss_pred             cEEEecCCCCccc------------------------HHHHHHhCC--C-CccEEEEecceeeccCCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        74 d~vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (287)
                      |+|||+||.....                        ++.++..++  + ..++|++||...+....          ...
T Consensus       495 DilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~----------~~~  564 (676)
T TIGR02632       495 DIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGK----------NAS  564 (676)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCC----------CCH
Confidence            9999999863210                        112233333  2 35799999965432111          112


Q ss_pred             cchhhhHHHHHHhh-------hCCCcEEEEecCeee-cCCCCCChhHHHHHHHH-cCCC----ccCCCCCCceeeeeeHH
Q 023110          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLK-AGRP----IPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~-g~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~i~~~  193 (287)
                      .|..+|...+.+++       ..++++..++|+.++ |.+-....  +...... .+..    ...+........+++.+
T Consensus       565 aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~pe  642 (676)
T TIGR02632       565 AYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGE--WREERAAAYGIPADELEEHYAKRTLLKRHIFPA  642 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCccccccc--chhhhhhcccCChHHHHHHHHhcCCcCCCcCHH
Confidence            24489998887764       247999999999887 33211000  0000000 0000    00001111123467899


Q ss_pred             HHHHHHHHHHcCC--ccCCceEEecCCcc
Q 023110          194 DLARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      |+|+++..++...  ...|..+++.++..
T Consensus       643 DVA~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       643 DIAEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             HHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence            9999999988643  33578889888753

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.33  E-value=4.4e-11  Score=98.68  Aligned_cols=180  Identities=16%  Similarity=0.174  Sum_probs=112.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCC--ChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||++++++|.++|++|++++|+..........+  ....+.....++.++.+|+.+++++.++++..     ++
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   91 (273)
T PRK08278         12 TGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGI   91 (273)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999865421111000  00111112346788999999999888877643     78


Q ss_pred             cEEEecCCCC--------------------cccHHHHHHhCC------CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           74 DVVYDINGRE--------------------ADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~--------------------~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      |+|||++|..                    ..++.++++++.      +..++|++||......         ....+..
T Consensus        92 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---------~~~~~~~  162 (273)
T PRK08278         92 DICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP---------KWFAPHT  162 (273)
T ss_pred             CEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc---------cccCCcc
Confidence            9999999862                    112334444432      3457888887432110         0112223


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCe-eecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVY-IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~-v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      .| .+|..+|.+++       ..+++++.+.|+. +-.+.         ......+..        ....+...+|+|++
T Consensus       163 ~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~---------~~~~~~~~~--------~~~~~~~p~~va~~  225 (273)
T PRK08278        163 AYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAA---------VRNLLGGDE--------AMRRSRTPEIMADA  225 (273)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHH---------HHhcccccc--------cccccCCHHHHHHH
Confidence            34 99999988763       3478999999984 32221         111111111        11235678999999


Q ss_pred             HHHHHcCC
Q 023110          199 FVQVLGNE  206 (287)
Q Consensus       199 ~~~~~~~~  206 (287)
                      ++.++...
T Consensus       226 ~~~l~~~~  233 (273)
T PRK08278        226 AYEILSRP  233 (273)
T ss_pred             HHHHhcCc
Confidence            99998764

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.32  E-value=1.7e-11  Score=100.65  Aligned_cols=176  Identities=16%  Similarity=0.152  Sum_probs=112.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc----CCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~----~~~d~v   76 (287)
                      |||+|++|.+++++|+++|++|++++|+.........     .+ ....++.++.+|+.|.+++.++++.    ..+|+|
T Consensus        11 tG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~l   84 (263)
T PRK09072         11 TGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAA-----RL-PYPGRHRWVVADLTSEAGREAVLARAREMGGINVL   84 (263)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HH-hcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEE
Confidence            7999999999999999999999999998654221111     01 1134788999999999888777653    258999


Q ss_pred             EecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchh
Q 023110           77 YDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (287)
Q Consensus        77 i~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  130 (287)
                      ||++|...                    .++..+++++    .  +..++|++||...+...          .....|..
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~Y~~  154 (263)
T PRK09072         85 INNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY----------PGYASYCA  154 (263)
T ss_pred             EECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC----------CCccHHHH
Confidence            99998632                    1223333332    2  34678888885432111          11122447


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      +|...+.+++       ..++.++.+.||.+.++...     .    ..  ...   .. .........+|+|+.++.++
T Consensus       155 sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~-----~----~~--~~~---~~-~~~~~~~~~~~va~~i~~~~  219 (263)
T PRK09072        155 SKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS-----E----AV--QAL---NR-ALGNAMDDPEDVAAAVLQAI  219 (263)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh-----h----hc--ccc---cc-cccCCCCCHHHHHHHHHHHH
Confidence            8887665442       35788999999987655210     0    00  000   00 00113567899999999999


Q ss_pred             cCCc
Q 023110          204 GNEK  207 (287)
Q Consensus       204 ~~~~  207 (287)
                      ++..
T Consensus       220 ~~~~  223 (263)
T PRK09072        220 EKER  223 (263)
T ss_pred             hCCC
Confidence            8764

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.30  E-value=5.2e-11  Score=95.35  Aligned_cols=139  Identities=19%  Similarity=0.166  Sum_probs=94.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc---CCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~---~~~d~vi   77 (287)
                      |||+|++|++++++|.++|++|++++|+...... +..         ..++.++.+|+.|++++.++++.   .++|+||
T Consensus         7 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi   76 (225)
T PRK08177          7 IGASRGLGLGLVDRLLERGWQVTATVRGPQQDTA-LQA---------LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF   76 (225)
T ss_pred             eCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHH-HHh---------ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence            7999999999999999999999999998765321 111         24677889999999888877764   2699999


Q ss_pred             ecCCCCc----------------------ccHHHHHHh----CC-CCccEEEEecceeeccCCCCCCCCCCCCCCCc-ch
Q 023110           78 DINGREA----------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RH  129 (287)
Q Consensus        78 ~~a~~~~----------------------~~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~~  129 (287)
                      |++|...                      .+...++++    ++ +...++++||..  +....      .+..+.. |.
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~--g~~~~------~~~~~~~~Y~  148 (225)
T PRK08177         77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQL--GSVEL------PDGGEMPLYK  148 (225)
T ss_pred             EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCc--ccccc------CCCCCccchH
Confidence            9987631                      112223333    33 335778888742  22111      0111122 34


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecC
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~  157 (287)
                      .+|...+.+.+       ..++.+..++||.+-.+
T Consensus       149 ~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        149 ASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence            88998887764       24688999999988655

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.30  E-value=4.4e-11  Score=110.72  Aligned_cols=172  Identities=15%  Similarity=0.173  Sum_probs=117.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.....+...     .+......+.++.+|+.|.+++.++++..     ++|+
T Consensus       377 tGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  451 (657)
T PRK07201        377 TGASSGIGRATAIKVAEAGATVFLVARNGEALDELVA-----EIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDY  451 (657)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654221111     11111346889999999999888877632     6899


Q ss_pred             EEecCCCCcc----------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      +||+||....                      +    +..++..+.  +..++|++||...+.....          ...
T Consensus       452 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~  521 (657)
T PRK07201        452 LVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPR----------FSA  521 (657)
T ss_pred             EEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC----------cch
Confidence            9999986310                      0    122334343  5579999999887643211          112


Q ss_pred             chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      |..+|...+.+.+       ..++++++++||.+..+.....            ...   .    ....+..+++|+.++
T Consensus       522 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~------------~~~---~----~~~~~~~~~~a~~i~  582 (657)
T PRK07201        522 YVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT------------KRY---N----NVPTISPEEAADMVV  582 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc------------ccc---c----CCCCCCHHHHHHHHH
Confidence            4489998887663       3589999999999877632100            000   0    113467999999999


Q ss_pred             HHHcCC
Q 023110          201 QVLGNE  206 (287)
Q Consensus       201 ~~~~~~  206 (287)
                      ..+.+.
T Consensus       583 ~~~~~~  588 (657)
T PRK07201        583 RAIVEK  588 (657)
T ss_pred             HHHHhC
Confidence            987654

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.29  E-value=4.6e-11  Score=100.75  Aligned_cols=192  Identities=19%  Similarity=0.159  Sum_probs=116.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC-hHHHHhhhhcC--CccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAK--GFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d-~~~~~~~~~~~--~~d~vi   77 (287)
                      +||||.+|+.+++.|+++|+.|+++.|+.......+..      .........+..+... .+.+....+..  ...+++
T Consensus        85 vGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~------~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v~  158 (411)
T KOG1203|consen   85 VGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGV------FFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVIVI  158 (411)
T ss_pred             ecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcc------cccccccceeeeccccccchhhhhhhhccccceeEE
Confidence            59999999999999999999999999998774433320      0001234444444433 33344444322  233555


Q ss_pred             ecCCC-------------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhC
Q 023110           78 DINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESK  142 (287)
Q Consensus        78 ~~a~~-------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~  142 (287)
                      -+++.             ...+++|+++||+  +++||+++|+++.-......+...    .-.....+|+.+|+++++.
T Consensus       159 ~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~----~~~~~~~~k~~~e~~~~~S  234 (411)
T KOG1203|consen  159 KGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILL----LNGLVLKAKLKAEKFLQDS  234 (411)
T ss_pred             ecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhh----hhhhhhHHHHhHHHHHHhc
Confidence            55433             1346899999998  999999999877532211110000    0111238899999999999


Q ss_pred             CCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCC
Q 023110          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (287)
Q Consensus       143 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (287)
                      +++++|||++...-......  .    ......+....++  ..--.+.-.|+|+.++.++.+.....
T Consensus       235 gl~ytiIR~g~~~~~~~~~~--~----~~~~~~~~~~~~~--~~~~~i~r~~vael~~~all~~~~~~  294 (411)
T KOG1203|consen  235 GLPYTIIRPGGLEQDTGGQR--E----VVVDDEKELLTVD--GGAYSISRLDVAELVAKALLNEAATF  294 (411)
T ss_pred             CCCcEEEeccccccCCCCcc--e----ecccCcccccccc--ccceeeehhhHHHHHHHHHhhhhhcc
Confidence            99999999998764321000  0    0011111111111  11146778899999999988766544

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.29  E-value=3.1e-10  Score=93.69  Aligned_cols=203  Identities=15%  Similarity=0.126  Sum_probs=119.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc----CCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~----~~~d~v   76 (287)
                      ||| |.||++++++|. +|++|++++|+.....+..     ..+......+.++.+|+.|.+++.++++.    .++|++
T Consensus         8 tGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l   80 (275)
T PRK06940          8 IGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAA-----KTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL   80 (275)
T ss_pred             ECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence            676 689999999996 7999999999865422111     11111123578899999999988888764    269999


Q ss_pred             EecCCCCc-------------ccHHHHHHhC----CCCccEEEEecceeeccCCC--------CCCCCCC--------C-
Q 023110           77 YDINGREA-------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDL--------LPHCETD--------T-  122 (287)
Q Consensus        77 i~~a~~~~-------------~~~~~ll~~~----~~~~~~i~~Ss~~v~~~~~~--------~~~~e~~--------~-  122 (287)
                      ||+||...             .++..+++++    ....++|++||.........        ...+..+        + 
T Consensus        81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (275)
T PRK06940         81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPD  160 (275)
T ss_pred             EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccccccc
Confidence            99998732             2233344432    22245677777654321100        0000000        0 


Q ss_pred             --CCCC-cchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh---hHHHHHHHHcCCCccCCCCCCceeee
Q 023110          123 --VDPK-SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       123 --~~~~-~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                        ..+. .|..+|...+.+.+       ..++++..+.||.+..+.....+   ............+.         .-+
T Consensus       161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r~  231 (275)
T PRK06940        161 AIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA---------GRP  231 (275)
T ss_pred             ccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCc---------ccC
Confidence              0112 23489998776543       35799999999998776321100   00111111111111         125


Q ss_pred             eeHHHHHHHHHHHHcCC--ccCCceEEecCCc
Q 023110          190 GHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       190 i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      ...+|+|+++..++...  ...|+.+.+.++.
T Consensus       232 ~~peeia~~~~fL~s~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        232 GTPDEIAALAEFLMGPRGSFITGSDFLVDGGA  263 (275)
T ss_pred             CCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence            67899999999988643  2367778877764

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.29  E-value=1.8e-10  Score=96.62  Aligned_cols=205  Identities=14%  Similarity=0.089  Sum_probs=123.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc----CCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~----~~~d~v   76 (287)
                      |||+|+||++++++|+++|++|++.+++.....+...    ..+......+.++.+|+.|.+++.++++.    .++|++
T Consensus        18 TGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~----~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~l   93 (306)
T PRK07792         18 TGAAAGLGRAEALGLARLGATVVVNDVASALDASDVL----DEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLDIV   93 (306)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHH----HHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence            7999999999999999999999998876432111111    11111134678899999999888887763    268999


Q ss_pred             EecCCCCcc--------------------cHHHHHHhC----C-C--------CccEEEEecceeeccCCCCCCCCCCCC
Q 023110           77 YDINGREAD--------------------EVEPILDAL----P-N--------LEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        77 i~~a~~~~~--------------------~~~~ll~~~----~-~--------~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (287)
                      ||++|....                    ++..+++++    . .        ..++|++||...+....          
T Consensus        94 i~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  163 (306)
T PRK07792         94 VNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV----------  163 (306)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC----------
Confidence            999987321                    222333332    1 1        14899999876432111          


Q ss_pred             CCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          124 DPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       124 ~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ....|..+|..++.+.+       ..++++..+.|+. ..+     +.....    ...+. ..   ......++.+|++
T Consensus       164 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~-----~~~~~~----~~~~~-~~---~~~~~~~~pe~va  229 (306)
T PRK07792        164 GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTA-----MTADVF----GDAPD-VE---AGGIDPLSPEHVV  229 (306)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCc-----hhhhhc----cccch-hh---hhccCCCCHHHHH
Confidence            11234589998887653       3578888888862 111     111100    00000 00   0112345789999


Q ss_pred             HHHHHHHcCC--ccCCceEEecCC------------------cccCHHHHHHHHHHH
Q 023110          197 RAFVQVLGNE--KASRQVFNISGE------------------KYVTFDGLARACAKA  233 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~------------------~~~s~~e~~~~i~~~  233 (287)
                      .++..++...  ...|++|.+.++                  ...+..|+.+.+.+.
T Consensus       230 ~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (306)
T PRK07792        230 PLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDY  286 (306)
T ss_pred             HHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHH
Confidence            9998887642  235666666543                  335666677766666

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.28  E-value=4e-10  Score=91.84  Aligned_cols=191  Identities=9%  Similarity=0.014  Sum_probs=119.4

Q ss_pred             CCcc--cchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCc
Q 023110            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~   73 (287)
                      |||+  +-||++++++|+++|++|++.+|+... .+.+.+.     .  ...+.++++|+.|++++.++++.     .++
T Consensus        13 tGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~-~~~~~~~-----~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079         13 MGVANKRSIAWGCAQAIKDQGATVIYTYQNDRM-KKSLQKL-----V--DEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             eCCCCCCchHHHHHHHHHHCCCEEEEecCchHH-HHHHHhh-----c--cCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            7898  799999999999999999999987321 2111110     0  23578899999999888877653     258


Q ss_pred             cEEEecCCCCcc------------------------c----HHHHHHhCCCCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |++||++|....                        +    ++.++..+....++|++||.......          +..
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~----------~~~  154 (252)
T PRK06079         85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAI----------PNY  154 (252)
T ss_pred             CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccC----------Ccc
Confidence            999999985310                        0    12233333333589999986532110          111


Q ss_pred             CcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ..|..+|...+.+.+       ..++++..|.||.+-.+..... ..........+..+.         .-+...+|+|+
T Consensus       155 ~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~  225 (252)
T PRK06079        155 NVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVD---------GVGVTIEEVGN  225 (252)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcc---------cCCCCHHHHHH
Confidence            123488998887663       3589999999999876531110 011122222211111         12566899999


Q ss_pred             HHHHHHcCC--ccCCceEEecCC
Q 023110          198 AFVQVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~  218 (287)
                      ++..++...  ...|+++.+.++
T Consensus       226 ~~~~l~s~~~~~itG~~i~vdgg  248 (252)
T PRK06079        226 TAAFLLSDLSTGVTGDIIYVDKG  248 (252)
T ss_pred             HHHHHhCcccccccccEEEeCCc
Confidence            999998653  235777777665

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.28  E-value=1.9e-10  Score=94.17  Aligned_cols=194  Identities=12%  Similarity=0.107  Sum_probs=120.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh-hcCCeEEEEecCCChHHHHhhhhcC-CccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~   78 (287)
                      ||++|.+|+++++.|+++|++|++++|+.........     .+.. ...++.++.+|+.+.+++..+++.. .+|++||
T Consensus        13 tG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~   87 (259)
T PRK06125         13 TGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAA-----DLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDILVN   87 (259)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEEEE
Confidence            6999999999999999999999999998654221110     0110 1245788999999999998888753 6999999


Q ss_pred             cCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hh
Q 023110           79 INGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (287)
Q Consensus        79 ~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (287)
                      ++|....                    +    ++.++..+.  +..++|++||.....           +......| .+
T Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~~~y~as  156 (259)
T PRK06125         88 NAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN-----------PDADYICGSAG  156 (259)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC-----------CCCCchHhHHH
Confidence            9986311                    1    222333333  335799888854311           11112223 77


Q ss_pred             hHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh---------hHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      |...+.+.+       ..++++..+.||.+..+.....+         ..........  .++       ..-+...+|+
T Consensus       157 k~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~v  227 (259)
T PRK06125        157 NAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLA--GLP-------LGRPATPEEV  227 (259)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhc--cCC-------cCCCcCHHHH
Confidence            887765553       35799999999988765210000         0000001110  011       1124678999


Q ss_pred             HHHHHHHHcCC--ccCCceEEecCCc
Q 023110          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      |++++.++...  ..+|..+.+.++.
T Consensus       228 a~~~~~l~~~~~~~~~G~~i~vdgg~  253 (259)
T PRK06125        228 ADLVAFLASPRSGYTSGTVVTVDGGI  253 (259)
T ss_pred             HHHHHHHcCchhccccCceEEecCCe
Confidence            99999988643  2367788887764

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.28  E-value=9.5e-11  Score=96.64  Aligned_cols=181  Identities=17%  Similarity=0.141  Sum_probs=110.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh-cCCeEEEEecCCChHHHHhhhhc-----CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~D~~d~~~~~~~~~~-----~~~d   74 (287)
                      |||+|.||.++++.|.++|++|++++|+.+.......     .+... ...+.++.+|+.+.+++.++++.     .++|
T Consensus         6 tGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          6 TGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVA-----DARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            7999999999999999999999999997654211110     11111 12345678999999888776653     2589


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHh----CC---CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           75 VVYDINGREA--------------------DEVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      +|||++|...                    .+...++++    +.   ...++|++||...+....          ....
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~----------~~~~  150 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALP----------WHAA  150 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCC----------CCcc
Confidence            9999998631                    112233443    21   246899999975432111          1112


Q ss_pred             chhhhHHHHHHh-------hhCCCcEEEEecCeeecCCCCCCh------hHHHHHHHHcCCCccCCCCCCceeeeeeHHH
Q 023110          128 RHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       128 ~~~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      |..+|...+.+.       ...++++++++||.+.++......      ..........          ......+..+|
T Consensus       151 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~  220 (272)
T PRK07832        151 YSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD----------RFRGHAVTPEK  220 (272)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH----------hcccCCCCHHH
Confidence            347777655544       246899999999999877421100      0000000000          00123478999


Q ss_pred             HHHHHHHHHcCC
Q 023110          195 LARAFVQVLGNE  206 (287)
Q Consensus       195 ~a~~~~~~~~~~  206 (287)
                      +|++++.++.++
T Consensus       221 vA~~~~~~~~~~  232 (272)
T PRK07832        221 AAEKILAGVEKN  232 (272)
T ss_pred             HHHHHHHHHhcC
Confidence            999999999643

>PRK05855 short chain dehydrogenase; Validated

Probab=99.28  E-value=2.6e-11  Score=110.66  Aligned_cols=187  Identities=16%  Similarity=0.054  Sum_probs=116.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|.++|++|++++|+.....+...     .+.....++.++.+|+.|++++.++++..     .+|+
T Consensus       321 ~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  395 (582)
T PRK05855        321 TGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAE-----LIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDI  395 (582)
T ss_pred             ECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            6999999999999999999999999998654221110     11111246789999999999888887642     5899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||...                    .++.++.++    +.  + ..++|++||...|.....          -..|
T Consensus       396 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------~~~Y  465 (582)
T PRK05855        396 VVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRS----------LPAY  465 (582)
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC----------CcHH
Confidence            999998732                    112233333    22  2 358999999887653221          1224


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHH---HHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF---HRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      ..+|...+.+.+       ..|++++.++||.+-.+...........   ...........+     ....+..+|+|++
T Consensus       466 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~p~~va~~  540 (582)
T PRK05855        466 ATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLY-----QRRGYGPEKVAKA  540 (582)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhc-----cccCCCHHHHHHH
Confidence            489998776652       4589999999998866521110000000   000000000000     0112457999999


Q ss_pred             HHHHHcCCc
Q 023110          199 FVQVLGNEK  207 (287)
Q Consensus       199 ~~~~~~~~~  207 (287)
                      ++.++.++.
T Consensus       541 ~~~~~~~~~  549 (582)
T PRK05855        541 IVDAVKRNK  549 (582)
T ss_pred             HHHHHHcCC
Confidence            999998765

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.27  E-value=1.4e-10  Score=95.01  Aligned_cols=193  Identities=16%  Similarity=0.208  Sum_probs=118.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.....+ +..       .....+.++.+|+.|.+++.++++.     .++|+
T Consensus        11 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-l~~-------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325        11 TGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQE-LEA-------AHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHh-------hcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654221 110       0124578899999998888777653     26899


Q ss_pred             EEecCCCCc-------------------------ccHHHHHHh----CC-CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           76 VYDINGREA-------------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        76 vi~~a~~~~-------------------------~~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      +||++|...                         .+...++++    +. ...++|++||...+....          ..
T Consensus        83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------~~  152 (262)
T TIGR03325        83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNG----------GG  152 (262)
T ss_pred             EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCC----------CC
Confidence            999998521                         011223333    22 235788888865432111          01


Q ss_pred             CcchhhhHHHHHHhh----h--CCCcEEEEecCeeecCCCCCC-h--hH----HH-HHHHHcCCCccCCCCCCceeeeee
Q 023110          126 KSRHKGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNP-V--EE----WF-FHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       126 ~~~~~~k~~~E~~~~----~--~~~~~~ilR~~~v~g~~~~~~-~--~~----~~-~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                      ..|..+|...+.+.+    +  ..+++..+.||.+..+..... .  ..    .. ....... .++       ..-+..
T Consensus       153 ~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p-------~~r~~~  224 (262)
T TIGR03325       153 PLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKS-VLP-------IGRMPD  224 (262)
T ss_pred             chhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhh-cCC-------CCCCCC
Confidence            124488998887663    2  238899999999876632110 0  00    00 0011111 111       112456


Q ss_pred             HHHHHHHHHHHHcCCc---cCCceEEecCCc
Q 023110          192 VKDLARAFVQVLGNEK---ASRQVFNISGEK  219 (287)
Q Consensus       192 ~~D~a~~~~~~~~~~~---~~~~~~~i~~~~  219 (287)
                      .+|+|.+++.++....   ..|.++.+.++.
T Consensus       225 p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~  255 (262)
T TIGR03325       225 AEEYTGAYVFFATRGDTVPATGAVLNYDGGM  255 (262)
T ss_pred             hHHhhhheeeeecCCCcccccceEEEecCCe
Confidence            8999999988876532   367777777654

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.27  E-value=1.7e-10  Score=92.26  Aligned_cols=173  Identities=13%  Similarity=0.122  Sum_probs=114.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC--CccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--~~d~vi~   78 (287)
                      |||+|.||+++++.|.++|++|++++|+.........          ..+++++++|+.+++++.++++..  .+|++||
T Consensus         6 tGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~   75 (223)
T PRK05884          6 TGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAK----------ELDVDAIVCDNTDPASLEEARGLFPHHLDTIVN   75 (223)
T ss_pred             EeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------hccCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence            6999999999999999999999999998654221111          124678899999999998887642  5899999


Q ss_pred             cCCCCc--------------cc---------------HHHHHHhCCCCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           79 INGREA--------------DE---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        79 ~a~~~~--------------~~---------------~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +++...              ..               ++.++..++...++|++||...              +....|.
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--------------~~~~~Y~  141 (223)
T PRK05884         76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP--------------PAGSAEA  141 (223)
T ss_pred             CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC--------------CCccccH
Confidence            986310              00               1112222333358999998541              0112244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+.+       ..++++..+.||.+..+.     .    .. ..  ..+          .-..+|+++++..+
T Consensus       142 asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~-----~----~~-~~--~~p----------~~~~~~ia~~~~~l  199 (223)
T PRK05884        142 AIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPG-----Y----DG-LS--RTP----------PPVAAEIARLALFL  199 (223)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchh-----h----hh-cc--CCC----------CCCHHHHHHHHHHH
Confidence            88888776653       357999999999885541     0    00 00  000          11689999999998


Q ss_pred             HcCC--ccCCceEEecCCc
Q 023110          203 LGNE--KASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~  219 (287)
                      +...  ...|+.+.+.++.
T Consensus       200 ~s~~~~~v~G~~i~vdgg~  218 (223)
T PRK05884        200 TTPAARHITGQTLHVSHGA  218 (223)
T ss_pred             cCchhhccCCcEEEeCCCe
Confidence            8643  2367777776654

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.26  E-value=1.5e-10  Score=90.89  Aligned_cols=162  Identities=17%  Similarity=0.180  Sum_probs=108.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|.||++++++|.++ ++|++++|+..                      .+.+|+.|.++++++++.. ++|++||+
T Consensus         6 tGas~giG~~la~~l~~~-~~vi~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~id~lv~~   62 (199)
T PRK07578          6 IGASGTIGRAVVAELSKR-HEVITAGRSSG----------------------DVQVDITDPASIRALFEKVGKVDAVVSA   62 (199)
T ss_pred             EcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence            699999999999999999 99999988742                      2578999999998888754 79999999


Q ss_pred             CCCCc--------------------ccHHHHHHhC----CCCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHH
Q 023110           80 NGREA--------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNT  135 (287)
Q Consensus        80 a~~~~--------------------~~~~~ll~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~  135 (287)
                      +|...                    .+..++.+++    .+..+++++||.......          +....|..+|...
T Consensus        63 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~----------~~~~~Y~~sK~a~  132 (199)
T PRK07578         63 AGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPI----------PGGASAATVNGAL  132 (199)
T ss_pred             CCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCC----------CCchHHHHHHHHH
Confidence            98631                    1122344432    234578888875532110          1111234788877


Q ss_pred             HHHhh------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccC
Q 023110          136 ESVLE------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       136 E~~~~------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (287)
                      +.+.+      ..++++..+.||.+-.+..          .  .+..++  +     ..++..+|+|+++..+++... .
T Consensus       133 ~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~----------~--~~~~~~--~-----~~~~~~~~~a~~~~~~~~~~~-~  192 (199)
T PRK07578        133 EGFVKAAALELPRGIRINVVSPTVLTESLE----------K--YGPFFP--G-----FEPVPAARVALAYVRSVEGAQ-T  192 (199)
T ss_pred             HHHHHHHHHHccCCeEEEEEcCCcccCchh----------h--hhhcCC--C-----CCCCCHHHHHHHHHHHhccce-e
Confidence            65543      3578899999987744310          0  001111  1     135789999999999987643 6


Q ss_pred             CceEEe
Q 023110          210 RQVFNI  215 (287)
Q Consensus       210 ~~~~~i  215 (287)
                      |++|++
T Consensus       193 g~~~~~  198 (199)
T PRK07578        193 GEVYKV  198 (199)
T ss_pred             eEEecc
Confidence            677765

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.25  E-value=7.4e-11  Score=99.20  Aligned_cols=152  Identities=14%  Similarity=0.036  Sum_probs=100.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh--cCCeEEEEecCCChHHHHhhhhc-----CCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~-----~~~   73 (287)
                      |||+|.||.+++++|+++|++|++++|+.+...+...     .+...  ...+.++.+|+.|.++++++++.     ..+
T Consensus        20 TGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~-----~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~i   94 (313)
T PRK05854         20 TGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVA-----AIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPI   94 (313)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            7999999999999999999999999998765322111     11111  23688999999999988877763     258


Q ss_pred             cEEEecCCCCcc-------------------c----HHHHHHhCC-CCccEEEEecceee-ccCCCCCCCCCCCCCCCcc
Q 023110           74 DVVYDINGREAD-------------------E----VEPILDALP-NLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        74 d~vi~~a~~~~~-------------------~----~~~ll~~~~-~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~~~~~  128 (287)
                      |++||+||....                   +    +..++..++ +..++|++||...+ +........+.....+...
T Consensus        95 D~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  174 (313)
T PRK05854         95 HLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAGMRA  174 (313)
T ss_pred             cEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCcchhh
Confidence            999999986311                   1    223344444 44689999997643 2222222223233333333


Q ss_pred             h-hhhHHHHHHhh---------hCCCcEEEEecCeeecC
Q 023110          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       129 ~-~~k~~~E~~~~---------~~~~~~~ilR~~~v~g~  157 (287)
                      | .+|...+.+.+         ..++.+..+.||.+-.+
T Consensus       175 Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        175 YSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence            4 89988765542         23689999999998654

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.25  E-value=2.9e-10  Score=93.49  Aligned_cols=195  Identities=13%  Similarity=0.119  Sum_probs=114.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh-hcCCeEEEEecCCChHHH----Hhhhhc-----
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFV----KSSLSA-----   70 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~----~~~~~~-----   70 (287)
                      |||+|+||++++++|+++|++|+++.|+.....+.+.    ..+.. ....+.++.+|+.|.+.+    .++++.     
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~   82 (267)
T TIGR02685         7 TGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLA----AELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAF   82 (267)
T ss_pred             eCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHH----HHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHcc
Confidence            7999999999999999999999998765432111110    00100 023466789999998644    333321     


Q ss_pred             CCccEEEecCCCCcc-------------------------------cHHHHHHh----CC-C-------CccEEEEecce
Q 023110           71 KGFDVVYDINGREAD-------------------------------EVEPILDA----LP-N-------LEQFIYCSSAG  107 (287)
Q Consensus        71 ~~~d~vi~~a~~~~~-------------------------------~~~~ll~~----~~-~-------~~~~i~~Ss~~  107 (287)
                      .++|+|||+||....                               +...+.++    ++ .       ..++|++||..
T Consensus        83 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~  162 (267)
T TIGR02685        83 GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAM  162 (267)
T ss_pred             CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhh
Confidence            269999999985210                               01122222    21 1       13566676644


Q ss_pred             eeccCCCCCCCCCCCCCCCc-chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccC
Q 023110          108 VYLKSDLLPHCETDTVDPKS-RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI  179 (287)
Q Consensus       108 v~~~~~~~~~~e~~~~~~~~-~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~  179 (287)
                      ...           +..+.. |..+|..++.+.+       ..|++++.|+||.+..|....   ..........  .+.
T Consensus       163 ~~~-----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~---~~~~~~~~~~--~~~  226 (267)
T TIGR02685       163 TDQ-----------PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP---FEVQEDYRRK--VPL  226 (267)
T ss_pred             ccC-----------CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc---hhHHHHHHHh--CCC
Confidence            311           111222 4489999887763       358999999999987663211   1111111111  111


Q ss_pred             CCCCCceeeeeeHHHHHHHHHHHHcCCc--cCCceEEecCCccc
Q 023110          180 PGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       180 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (287)
                       +     ......+|++.+++.++....  ..|..+.+.++..+
T Consensus       227 -~-----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       227 -G-----QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             -C-----cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence             1     123568999999999987542  36777788776544

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.25  E-value=2.3e-10  Score=92.45  Aligned_cols=172  Identities=13%  Similarity=0.063  Sum_probs=106.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC--hHHHHhhhh----c--CC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLS----A--KG   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d--~~~~~~~~~----~--~~   72 (287)
                      |||+|++|++++++|+++|++|++++|+.........    .........+.++.+|+.+  .+++..+++    .  ..
T Consensus        12 tG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~   87 (239)
T PRK08703         12 TGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYD----AIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGK   87 (239)
T ss_pred             ECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH----HHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCCC
Confidence            6999999999999999999999999998754221110    0000001346678899865  333433321    1  26


Q ss_pred             ccEEEecCCCC---------------------cccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           73 FDVVYDINGRE---------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        73 ~d~vi~~a~~~---------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      +|+|||+++..                     ..+...++++    +.  +..+++++||.....           +...
T Consensus        88 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~~~  156 (239)
T PRK08703         88 LDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET-----------PKAY  156 (239)
T ss_pred             CCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc-----------CCCC
Confidence            89999999852                     1112223333    33  456899999854321           1111


Q ss_pred             -CcchhhhHHHHHHhh----h---C-CCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          126 -KSRHKGKLNTESVLE----S---K-GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 -~~~~~~k~~~E~~~~----~---~-~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                       ..|..+|...+.+++    +   . ++++.+++||.+.+|.....         ..+         .....+...+|++
T Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~---------~~~---------~~~~~~~~~~~~~  218 (239)
T PRK08703        157 WGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS---------HPG---------EAKSERKSYGDVL  218 (239)
T ss_pred             ccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc---------CCC---------CCccccCCHHHHH
Confidence             124489999887763    1   2 58999999999998842110         000         0111345789999


Q ss_pred             HHHHHHHcC
Q 023110          197 RAFVQVLGN  205 (287)
Q Consensus       197 ~~~~~~~~~  205 (287)
                      ..+..++..
T Consensus       219 ~~~~~~~~~  227 (239)
T PRK08703        219 PAFVWWASA  227 (239)
T ss_pred             HHHHHHhCc
Confidence            999999863

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.23  E-value=6.3e-10  Score=90.88  Aligned_cols=194  Identities=15%  Similarity=0.095  Sum_probs=117.6

Q ss_pred             CCccc--chHHHHHHHHHHcCCeEEEEEcCCcccc-------ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC
Q 023110            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIA-------QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (287)
Q Consensus         1 tGatG--~iG~~l~~~l~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~   71 (287)
                      |||+|  .||++++++|+++|++|++..|......       ..+.. ......+....+.++++|+.+.+++.++++..
T Consensus        12 tGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~D~~~~~~i~~~~~~~   90 (256)
T PRK12859         12 TGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQ-LQEELLKNGVKVSSMELDLTQNDAPKELLNKV   90 (256)
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHH-HHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            79985  7999999999999999998865421100       00000 00111112346788999999998888777532


Q ss_pred             -----CccEEEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCC
Q 023110           72 -----GFDVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCET  120 (287)
Q Consensus        72 -----~~d~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~  120 (287)
                           .+|++||+++....                    +    +..++..++  +..++|++||.......        
T Consensus        91 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  162 (256)
T PRK12859         91 TEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPM--------  162 (256)
T ss_pred             HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCC--------
Confidence                 48999999986311                    1    223344443  34699999997643211        


Q ss_pred             CCCCCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHH
Q 023110          121 DTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       121 ~~~~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                        .....|..+|..++.+.+       ..+++++.++||.+-.+...    ...........+.         ..+...+
T Consensus       163 --~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~----~~~~~~~~~~~~~---------~~~~~~~  227 (256)
T PRK12859        163 --VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT----EEIKQGLLPMFPF---------GRIGEPK  227 (256)
T ss_pred             --CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC----HHHHHHHHhcCCC---------CCCcCHH
Confidence              111224488888876653       35799999999988665311    1111111111111         1234589


Q ss_pred             HHHHHHHHHHcCC--ccCCceEEecCC
Q 023110          194 DLARAFVQVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~i~~~  218 (287)
                      |+|+++..++...  ...|+.+.+.++
T Consensus       228 d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        228 DAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             HHHHHHHHHhCccccCccCcEEEeCCC
Confidence            9999999988653  225667666654

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.22  E-value=1.6e-10  Score=92.27  Aligned_cols=172  Identities=16%  Similarity=0.106  Sum_probs=112.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc---CCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~---~~~d~vi   77 (287)
                      |||+|.+|+++++.|+++|++|++++|+..... .+.          ..+++++.+|+.+.+.+..+++.   ..+|+||
T Consensus         7 tG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~-~~~----------~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi   75 (222)
T PRK06953          7 VGASRGIGREFVRQYRADGWRVIATARDAAALA-ALQ----------ALGAEALALDVADPASVAGLAWKLDGEALDAAV   75 (222)
T ss_pred             EcCCCchhHHHHHHHHhCCCEEEEEECCHHHHH-HHH----------hccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence            799999999999999999999999999865421 111          13467899999999988886532   2589999


Q ss_pred             ecCCCCc----------------------ccHHHHHHhCC-----CCccEEEEecce-eeccCCCCCCCCCCCCCC-Ccc
Q 023110           78 DINGREA----------------------DEVEPILDALP-----NLEQFIYCSSAG-VYLKSDLLPHCETDTVDP-KSR  128 (287)
Q Consensus        78 ~~a~~~~----------------------~~~~~ll~~~~-----~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~~-~~~  128 (287)
                      |+++...                      .++..+++++.     ...+++++||.. .++...         ..+ ..|
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------~~~~~~Y  146 (222)
T PRK06953         76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT---------GTTGWLY  146 (222)
T ss_pred             ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc---------CCCcccc
Confidence            9988631                      12333444432     234688888754 443211         111 124


Q ss_pred             hhhhHHHHHHhhh-----CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          129 HKGKLNTESVLES-----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       129 ~~~k~~~E~~~~~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      ..+|...+.+++.     .++++..++||.+..+...                     +    ...+..++.++.+..++
T Consensus       147 ~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~---------------------~----~~~~~~~~~~~~~~~~~  201 (222)
T PRK06953        147 RASKAALNDALRAASLQARHATCIALHPGWVRTDMGG---------------------A----QAALDPAQSVAGMRRVI  201 (222)
T ss_pred             HHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC---------------------C----CCCCCHHHHHHHHHHHH
Confidence            4889988877643     3678899999988766210                     0    11245788888888877


Q ss_pred             cCCcc--CCceEEecC
Q 023110          204 GNEKA--SRQVFNISG  217 (287)
Q Consensus       204 ~~~~~--~~~~~~i~~  217 (287)
                      .....  .+..|...+
T Consensus       202 ~~~~~~~~~~~~~~~~  217 (222)
T PRK06953        202 AQATRRDNGRFFQYDG  217 (222)
T ss_pred             HhcCcccCceEEeeCC
Confidence            54332  344444443

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.21  E-value=2.6e-10  Score=92.60  Aligned_cols=173  Identities=14%  Similarity=0.111  Sum_probs=106.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh-hcCCeEEEEecCC--ChHHHHhhhhc-----CC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRK--DYDFVKSSLSA-----KG   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~D~~--d~~~~~~~~~~-----~~   72 (287)
                      |||+|+||.+++++|++.|++|++++|+.........     .+.. ....+.++.+|+.  +.+++.++++.     ..
T Consensus        18 tG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~   92 (247)
T PRK08945         18 TGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYD-----EIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGR   92 (247)
T ss_pred             eCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHH-----HHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCC
Confidence            7999999999999999999999999998754221111     0100 1235677888885  45555444332     16


Q ss_pred             ccEEEecCCCC---------------------cccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           73 FDVVYDINGRE---------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        73 ~d~vi~~a~~~---------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      +|+|||+++..                     +.++..++++    +.  +..+||++||.........          -
T Consensus        93 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~----------~  162 (247)
T PRK08945         93 LDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRAN----------W  162 (247)
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCC----------C
Confidence            89999999752                     1122223333    33  5678999998654321111          1


Q ss_pred             CcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      ..|..+|..++.+++       ..+++++.++|+.+-++....         .....      +   ...+...+|++.+
T Consensus       163 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~---------~~~~~------~---~~~~~~~~~~~~~  224 (247)
T PRK08945        163 GAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS---------AFPGE------D---PQKLKTPEDIMPL  224 (247)
T ss_pred             cccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh---------hcCcc------c---ccCCCCHHHHHHH
Confidence            124488988887663       246888899998775542100         00000      0   1135678999999


Q ss_pred             HHHHHcCC
Q 023110          199 FVQVLGNE  206 (287)
Q Consensus       199 ~~~~~~~~  206 (287)
                      +..++...
T Consensus       225 ~~~~~~~~  232 (247)
T PRK08945        225 YLYLMGDD  232 (247)
T ss_pred             HHHHhCcc
Confidence            99987543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.20  E-value=1.2e-10  Score=94.33  Aligned_cols=185  Identities=13%  Similarity=0.099  Sum_probs=113.5

Q ss_pred             HHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC--CccEEEecCCCC-----
Q 023110           11 LSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYDINGRE-----   83 (287)
Q Consensus        11 l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--~~d~vi~~a~~~-----   83 (287)
                      +++.|+++|++|++++|+....                ...+++++|+.|.+++.++++..  ++|+|||+||..     
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~----------------~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~   64 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGM----------------TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPV   64 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchh----------------hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCH
Confidence            4788999999999999986541                11346789999999999888753  689999999863     


Q ss_pred             -------cccHHHHHHhC----CCCccEEEEecceeeccCCCCCCCCC----------------CCCCCCcch-hhhHHH
Q 023110           84 -------ADEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCET----------------DTVDPKSRH-KGKLNT  135 (287)
Q Consensus        84 -------~~~~~~ll~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~----------------~~~~~~~~~-~~k~~~  135 (287)
                             ..++..+++++    ....++|++||...|+.....+..+.                .+..+...| .+|...
T Consensus        65 ~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~  144 (241)
T PRK12428         65 ELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEAL  144 (241)
T ss_pred             HHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHH
Confidence                   22333344443    33369999999988753221111110                122223345 899887


Q ss_pred             HHHh--------hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCc
Q 023110          136 ESVL--------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       136 E~~~--------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (287)
                      +.+.        ...++++..++||.+.++.... .....-.........+       ...+...+|+|++++.++....
T Consensus       145 ~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~-------~~~~~~pe~va~~~~~l~s~~~  216 (241)
T PRK12428        145 ILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGD-FRSMLGQERVDSDAKR-------MGRPATADEQAAVLVFLCSDAA  216 (241)
T ss_pred             HHHHHHHHHHhhhccCeEEEEeecCCccCccccc-chhhhhhHhhhhcccc-------cCCCCCHHHHHHHHHHHcChhh
Confidence            7543        2357999999999998874211 1000000000000001       1124568999999999885432


Q ss_pred             --cCCceEEecCCc
Q 023110          208 --ASRQVFNISGEK  219 (287)
Q Consensus       208 --~~~~~~~i~~~~  219 (287)
                        ..|+.+.+.++.
T Consensus       217 ~~~~G~~i~vdgg~  230 (241)
T PRK12428        217 RWINGVNLPVDGGL  230 (241)
T ss_pred             cCccCcEEEecCch
Confidence              256666666653

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.19  E-value=2.4e-10  Score=84.04  Aligned_cols=133  Identities=21%  Similarity=0.187  Sum_probs=99.6

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      +||||-+|+.|++.+.+.+  .+|+++.|......+.            .+.+.....|...-+++...++  ++|+.++
T Consensus        24 lGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at------------~k~v~q~~vDf~Kl~~~a~~~q--g~dV~Fc   89 (238)
T KOG4039|consen   24 LGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT------------DKVVAQVEVDFSKLSQLATNEQ--GPDVLFC   89 (238)
T ss_pred             EeccccccHHHHHHHHhcccceeEEEEEeccCCCccc------------cceeeeEEechHHHHHHHhhhc--CCceEEE
Confidence            4999999999999999987  5899999986432211            2456677788877777777777  9999999


Q ss_pred             cCCCCc-------------ccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCC
Q 023110           79 INGREA-------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKG  143 (287)
Q Consensus        79 ~a~~~~-------------~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~  143 (287)
                      +.|..-             +-...++++++  ++++|+.+||.+.            ++-....|.+.|-++|+-+.+.+
T Consensus        90 aLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GA------------d~sSrFlY~k~KGEvE~~v~eL~  157 (238)
T KOG4039|consen   90 ALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGA------------DPSSRFLYMKMKGEVERDVIELD  157 (238)
T ss_pred             eecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCC------------Ccccceeeeeccchhhhhhhhcc
Confidence            976531             22455667766  8999999999875            22222234488999998887766


Q ss_pred             C-cEEEEecCeeecCCC
Q 023110          144 V-NWTSLRPVYIYGPLN  159 (287)
Q Consensus       144 ~-~~~ilR~~~v~g~~~  159 (287)
                      + .++|+|||.+.|.+.
T Consensus       158 F~~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  158 FKHIIILRPGPLLGERT  174 (238)
T ss_pred             ccEEEEecCcceecccc
Confidence            6 578999999999753

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.17  E-value=1.4e-09  Score=90.37  Aligned_cols=196  Identities=17%  Similarity=0.120  Sum_probs=117.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcc-----ccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-----IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----   70 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----   70 (287)
                      |||++.||++++++|.++|++|++++|+...     ....+.... ..+......+.++.+|+.|.+++.++++.     
T Consensus        12 TGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (286)
T PRK07791         12 TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVV-DEIVAAGGEAVANGDDIADWDGAANLVDAAVETF   90 (286)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHH-HHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHhc
Confidence            7999999999999999999999999876510     000000000 11111124577899999998888777653     


Q ss_pred             CCccEEEecCCCCc--------------------ccH----HHHHHhCC-C-------CccEEEEecceeeccCCCCCCC
Q 023110           71 KGFDVVYDINGREA--------------------DEV----EPILDALP-N-------LEQFIYCSSAGVYLKSDLLPHC  118 (287)
Q Consensus        71 ~~~d~vi~~a~~~~--------------------~~~----~~ll~~~~-~-------~~~~i~~Ss~~v~~~~~~~~~~  118 (287)
                      .++|++||+||...                    .+.    +.++..+. .       ..++|++||...+....     
T Consensus        91 g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~-----  165 (286)
T PRK07791         91 GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSV-----  165 (286)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCC-----
Confidence            26899999998631                    111    22222222 1       24899999865432111     


Q ss_pred             CCCCCCCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeee
Q 023110          119 ETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       119 e~~~~~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                           ....|..+|...+.+.+       ..++++..|.|| +..+     +............+       ........
T Consensus       166 -----~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~-----~~~~~~~~~~~~~~-------~~~~~~~~  227 (286)
T PRK07791        166 -----GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTR-----MTETVFAEMMAKPE-------EGEFDAMA  227 (286)
T ss_pred             -----CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCC-----cchhhHHHHHhcCc-------ccccCCCC
Confidence                 11124488888776653       368999999998 4322     11111111111111       01112457


Q ss_pred             HHHHHHHHHHHHcCC--ccCCceEEecCCcc
Q 023110          192 VKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      .+|+|.+++.++...  ...|+.+.+.++..
T Consensus       228 pedva~~~~~L~s~~~~~itG~~i~vdgG~~  258 (286)
T PRK07791        228 PENVSPLVVWLGSAESRDVTGKVFEVEGGKI  258 (286)
T ss_pred             HHHHHHHHHHHhCchhcCCCCcEEEEcCCce
Confidence            899999999988643  23677777777653

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.16  E-value=3.4e-09  Score=86.87  Aligned_cols=194  Identities=11%  Similarity=0.087  Sum_probs=117.2

Q ss_pred             CCc--ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCc
Q 023110            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGa--tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~   73 (287)
                      |||  ++-||++++++|.++|++|++..|+... .+.+.     .+.........+++|+.|++++.++++.     .++
T Consensus        12 TGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   85 (261)
T PRK08690         12 TGMISERSIAYGIAKACREQGAELAFTYVVDKL-EERVR-----KMAAELDSELVFRCDVASDDEINQVFADLGKHWDGL   85 (261)
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHH-HHHHH-----HHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            676  6799999999999999999998775321 11111     0100012345789999999988877753     269


Q ss_pred             cEEEecCCCCcc---------c--------------------HHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD---------E--------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        74 d~vi~~a~~~~~---------~--------------------~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (287)
                      |++||+||....         .                    ++.++..++ +..++|++||...+...          +
T Consensus        86 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~----------~  155 (261)
T PRK08690         86 DGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAI----------P  155 (261)
T ss_pred             cEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCC----------C
Confidence            999999987421         0                    011122222 33578999886643111          1


Q ss_pred             CCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          124 DPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       124 ~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      .-..|..+|...+.+.+       ..++++..+.||.+-.+...... .........+..++         ..+...+|+
T Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~peev  226 (261)
T PRK08690        156 NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPL---------RRNVTIEEV  226 (261)
T ss_pred             CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCC---------CCCCCHHHH
Confidence            11123488888876653       46899999999998665211100 01111111111111         125668999


Q ss_pred             HHHHHHHHcCC--ccCCceEEecCCc
Q 023110          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      |+++..++...  ...|..+.+.++.
T Consensus       227 A~~v~~l~s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        227 GNTAAFLLSDLSSGITGEITYVDGGY  252 (261)
T ss_pred             HHHHHHHhCcccCCcceeEEEEcCCc
Confidence            99999999753  2367777777764

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.16  E-value=5.1e-09  Score=84.39  Aligned_cols=178  Identities=16%  Similarity=0.120  Sum_probs=111.3

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi   77 (287)
                      |||+|+||++++++|.++|  +.|....|+....   ..          ..++.++++|+.+.+++.++.+.. ++|+||
T Consensus         6 tGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~~----------~~~~~~~~~Dls~~~~~~~~~~~~~~id~li   72 (235)
T PRK09009          6 VGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---FQ----------HDNVQWHALDVTDEAEIKQLSEQFTQLDWLI   72 (235)
T ss_pred             ECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---cc----------cCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            7999999999999999985  5666666654321   11          247788999999998877765432 789999


Q ss_pred             ecCCCCcc------------------------------cHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           78 DINGREAD------------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        78 ~~a~~~~~------------------------------~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |++|....                              .++.++..++  +..+++++||..  +..     .+. ...+
T Consensus        73 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~-----~~~-~~~~  144 (235)
T PRK09009         73 NCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSI-----SDN-RLGG  144 (235)
T ss_pred             ECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--ccc-----ccC-CCCC
Confidence            99987421                              0122334444  345788888732  111     111 1112


Q ss_pred             C-cchhhhHHHHHHhhh---------CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          126 K-SRHKGKLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       126 ~-~~~~~k~~~E~~~~~---------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      . .|..+|..++.+.+.         .++.+..+.||.+..+....         .....+         ...++..+|+
T Consensus       145 ~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~---------~~~~~~---------~~~~~~~~~~  206 (235)
T PRK09009        145 WYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP---------FQQNVP---------KGKLFTPEYV  206 (235)
T ss_pred             cchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc---------hhhccc---------cCCCCCHHHH
Confidence            2 234888888876631         36788899999887663210         001111         1124678999


Q ss_pred             HHHHHHHHcCCc--cCCceEEecC
Q 023110          196 ARAFVQVLGNEK--ASRQVFNISG  217 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~  217 (287)
                      |+++..++....  ..|..+.+.+
T Consensus       207 a~~~~~l~~~~~~~~~g~~~~~~g  230 (235)
T PRK09009        207 AQCLLGIIANATPAQSGSFLAYDG  230 (235)
T ss_pred             HHHHHHHHHcCChhhCCcEEeeCC
Confidence            999999997653  2455555444

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.15  E-value=4.1e-09  Score=86.19  Aligned_cols=195  Identities=11%  Similarity=0.065  Sum_probs=117.9

Q ss_pred             CCcc--cchHHHHHHHHHHcCCeEEEEEcCCcc--ccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----
Q 023110            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----   71 (287)
Q Consensus         1 tGat--G~iG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----   71 (287)
                      |||+  +-||++++++|.++|++|++..|+...  ..+.+.     .+.+....+.++++|+.|++++.++++..     
T Consensus        12 tGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g   86 (258)
T PRK07370         12 TGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVR-----ELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWG   86 (258)
T ss_pred             eCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHH-----HHHhccCcceEeecCcCCHHHHHHHHHHHHHHcC
Confidence            6875  799999999999999999888765432  111111     11111234668899999999888777642     


Q ss_pred             CccEEEecCCCCc-----c-------------------c----HHHHHHhCCCCccEEEEecceeeccCCCCCCCCCCCC
Q 023110           72 GFDVVYDINGREA-----D-------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        72 ~~d~vi~~a~~~~-----~-------------------~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (287)
                      ++|++||++|...     .                   +    ++.++..++...++|++||......          .+
T Consensus        87 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~----------~~  156 (258)
T PRK07370         87 KLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRA----------IP  156 (258)
T ss_pred             CCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccC----------Cc
Confidence            6899999998631     0                   1    1223333333368999998653211          01


Q ss_pred             CCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          124 DPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       124 ~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      ....|..+|...+.+.+       ..++++..+.||.+-.+.... .-............+         ..-+...+|+
T Consensus       157 ~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~~~dv  227 (258)
T PRK07370        157 NYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAP---------LRRTVTQTEV  227 (258)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCC---------cCcCCCHHHH
Confidence            11124488988877653       357999999999987653110 000111111111111         1134568999


Q ss_pred             HHHHHHHHcCCc--cCCceEEecCCc
Q 023110          196 ARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      +.++..++....  -.|+.+.+.++.
T Consensus       228 a~~~~fl~s~~~~~~tG~~i~vdgg~  253 (258)
T PRK07370        228 GNTAAFLLSDLASGITGQTIYVDAGY  253 (258)
T ss_pred             HHHHHHHhChhhccccCcEEEECCcc
Confidence            999999986432  256777776653

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.15  E-value=3.6e-09  Score=87.12  Aligned_cols=195  Identities=13%  Similarity=0.139  Sum_probs=118.1

Q ss_pred             CCccc--chHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||++  -||++++++|.++|++|++.+|+... .+.+.     .+.........+++|+.|.+++.++++..     .+
T Consensus        13 TGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~-~~~~~-----~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (271)
T PRK06505         13 MGVANDHSIAWGIAKQLAAQGAELAFTYQGEAL-GKRVK-----PLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGKL   86 (271)
T ss_pred             eCCCCCCcHHHHHHHHHHhCCCEEEEecCchHH-HHHHH-----HHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            79986  99999999999999999999886432 11111     00000122346899999998888777642     68


Q ss_pred             cEEEecCCCCcc------------------------c----HHHHHHhCCCCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |++||+||....                        +    ++.++..+....++|++||.......          +..
T Consensus        87 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~----------~~~  156 (271)
T PRK06505         87 DFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVM----------PNY  156 (271)
T ss_pred             CEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccC----------Ccc
Confidence            999999986310                        0    11222333323579999986532110          111


Q ss_pred             CcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ..|..+|...+.+.+       ..++++..|.||.+-.+..... -............++         .-+...+|+|+
T Consensus       157 ~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~peeva~  227 (271)
T PRK06505        157 NVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPL---------RRTVTIDEVGG  227 (271)
T ss_pred             chhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCc---------cccCCHHHHHH
Confidence            124488988776653       3589999999999876532110 000111111111111         12356899999


Q ss_pred             HHHHHHcCCc--cCCceEEecCCcc
Q 023110          198 AFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      +++.++....  ..|+.+.+.++..
T Consensus       228 ~~~fL~s~~~~~itG~~i~vdgG~~  252 (271)
T PRK06505        228 SALYLLSDLSSGVTGEIHFVDSGYN  252 (271)
T ss_pred             HHHHHhCccccccCceEEeecCCcc
Confidence            9999986432  3677778777643

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.14  E-value=5e-11  Score=96.49  Aligned_cols=192  Identities=23%  Similarity=0.293  Sum_probs=123.8

Q ss_pred             Ccc--cchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc------CCc
Q 023110            2 GGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGF   73 (287)
Q Consensus         2 Gat--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~------~~~   73 (287)
                      |++  +-||+++++.|+++|++|++.+|+.....+.+.+     +.+ ..+.+++.+|+.+++++.++++.      -++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~-----l~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~i   74 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEE-----LAK-EYGAEVIQCDLSDEESVEALFDEAVERFGGRI   74 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHH-----HHH-HTTSEEEESCTTSHHHHHHHHHHHHHHHCSSE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH-----HHH-HcCCceEeecCcchHHHHHHHHHHHhhcCCCe
Confidence            566  9999999999999999999999998763222211     111 12345799999999888887654      378


Q ss_pred             cEEEecCCCCcc----c------------------------HHHHHHhCCCCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD----E------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~----~------------------------~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |++||+++....    .                        ++.++..++...++|++||......           ...
T Consensus        75 D~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~-----------~~~  143 (241)
T PF13561_consen   75 DILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRP-----------MPG  143 (241)
T ss_dssp             SEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSB-----------STT
T ss_pred             EEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhccc-----------Ccc
Confidence            999999876432    0                        1222233333468999998754211           111


Q ss_pred             Ccch-hhhHHHHHHhh-------h-CCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          126 KSRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~-~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      ...| .+|...+.+.+       . .|+++..|.||.+..+.... .....+........++   +      .+...+|+
T Consensus       144 ~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl---~------r~~~~~ev  214 (241)
T PF13561_consen  144 YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPL---G------RLGTPEEV  214 (241)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTT---S------SHBEHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhcc---C------CCcCHHHH
Confidence            2234 88888887653       4 68999999999887652100 0012233333322222   1      23479999


Q ss_pred             HHHHHHHHcCC--ccCCceEEecCCc
Q 023110          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      |.++..++...  --+|+.+.+.++.
T Consensus       215 A~~v~fL~s~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  215 ANAVLFLASDAASYITGQVIPVDGGF  240 (241)
T ss_dssp             HHHHHHHHSGGGTTGTSEEEEESTTG
T ss_pred             HHHHHHHhCccccCccCCeEEECCCc
Confidence            99999999754  3378888887763

...

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.13  E-value=5.5e-09  Score=85.37  Aligned_cols=194  Identities=9%  Similarity=0.056  Sum_probs=116.9

Q ss_pred             CCcc--cchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh-cCCeEEEEecCCChHHHHhhhhc-----CC
Q 023110            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KG   72 (287)
Q Consensus         1 tGat--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~D~~d~~~~~~~~~~-----~~   72 (287)
                      |||+  +-||.+++++|.++|++|++.+|+... .+.+.+    ...+. ..++.++++|+.|++++.++++.     .+
T Consensus        13 tGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   87 (257)
T PRK08594         13 MGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRE----LADTLEGQESLLLPCDVTSDEEITACFETIKEEVGV   87 (257)
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHH----HHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCC
Confidence            6886  899999999999999999998876322 111110    00000 24678899999999888777753     25


Q ss_pred             ccEEEecCCCCc-----c-------------------c----HHHHHHhCCCCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           73 FDVVYDINGREA-----D-------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        73 ~d~vi~~a~~~~-----~-------------------~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      +|++||++|...     .                   +    ++.++..+....++|++||....-.          .+.
T Consensus        88 ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~----------~~~  157 (257)
T PRK08594         88 IHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERV----------VQN  157 (257)
T ss_pred             ccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccC----------CCC
Confidence            899999988531     0                   0    1122333333358999998654210          011


Q ss_pred             CCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ...|..+|...+.+.+       ..++++..|.||.+-.+.... .-.........+.  .+       ...+...+|+|
T Consensus       158 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~p~~va  228 (257)
T PRK08594        158 YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEER--AP-------LRRTTTQEEVG  228 (257)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhc--CC-------ccccCCHHHHH
Confidence            1124488998877653       357999999999886652100 0000111111111  11       11245689999


Q ss_pred             HHHHHHHcCCc--cCCceEEecCC
Q 023110          197 RAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~  218 (287)
                      .+++.++....  ..|..+.+.++
T Consensus       229 ~~~~~l~s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        229 DTAAFLFSDLSRGVTGENIHVDSG  252 (257)
T ss_pred             HHHHHHcCcccccccceEEEECCc
Confidence            99999886432  35777777665

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.13  E-value=2e-09  Score=87.12  Aligned_cols=70  Identities=19%  Similarity=0.190  Sum_probs=55.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+|.||++++++|+++|++|++++|+.........          ......+.+|+.|.+++.+.+.  ++|++||+|
T Consensus        20 TGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~--~iDilVnnA   87 (245)
T PRK12367         20 TGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND----------ESPNEWIKWECGKEESLDKQLA--SLDVLILNH   87 (245)
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc----------cCCCeEEEeeCCCHHHHHHhcC--CCCEEEECC
Confidence            7999999999999999999999999998632111110          1123578899999999998887  899999999


Q ss_pred             CC
Q 023110           81 GR   82 (287)
Q Consensus        81 ~~   82 (287)
                      |.
T Consensus        88 G~   89 (245)
T PRK12367         88 GI   89 (245)
T ss_pred             cc
Confidence            86

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.12  E-value=4.9e-09  Score=78.52  Aligned_cols=194  Identities=17%  Similarity=0.192  Sum_probs=125.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccc---cCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ---QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~   72 (287)
                      |||+.-||+++++.|.+.|++|.+.+++.....+   .+..         ..+-.-+.+|+.+.++++..+++.     .
T Consensus        20 tGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g---------~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   20 TGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG---------YGDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             ecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC---------CCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            6999999999999999999999999998765322   2321         134556899999988887766542     6


Q ss_pred             ccEEEecCCCCccc------------------------HHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           73 FDVVYDINGREADE------------------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        73 ~d~vi~~a~~~~~~------------------------~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      ++++++|||.+-+.                        ++...+++-    +.-++|.+||+----...++    ..+..
T Consensus        91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQ----tnYAA  166 (256)
T KOG1200|consen   91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQ----TNYAA  166 (256)
T ss_pred             CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccc----hhhhh
Confidence            99999999985332                        223333311    33489999985321111111    01110


Q ss_pred             C-Ccc-hhhhHHHHHHhhhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          125 P-KSR-HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       125 ~-~~~-~~~k~~~E~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      . .+. ..+|..+.+ +...++++..+-||+|-.|-. ..+.+..+..+....|...+|+         .+|+|..++.+
T Consensus       167 sK~GvIgftktaArE-la~knIrvN~VlPGFI~tpMT-~~mp~~v~~ki~~~iPmgr~G~---------~EevA~~V~fL  235 (256)
T KOG1200|consen  167 SKGGVIGFTKTAARE-LARKNIRVNVVLPGFIATPMT-EAMPPKVLDKILGMIPMGRLGE---------AEEVANLVLFL  235 (256)
T ss_pred             hcCceeeeeHHHHHH-HhhcCceEeEeccccccChhh-hhcCHHHHHHHHccCCccccCC---------HHHHHHHHHHH
Confidence            0 111 245555544 455689999999999988742 2345566777777766655444         78999998888


Q ss_pred             HcCCc--cCCceEEecCC
Q 023110          203 LGNEK--ASRQVFNISGE  218 (287)
Q Consensus       203 ~~~~~--~~~~~~~i~~~  218 (287)
                      .....  -.|..+.+.++
T Consensus       236 AS~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  236 ASDASSYITGTTLEVTGG  253 (256)
T ss_pred             hccccccccceeEEEecc
Confidence            74332  24667777665

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.12  E-value=7.6e-09  Score=84.63  Aligned_cols=193  Identities=12%  Similarity=0.073  Sum_probs=116.6

Q ss_pred             CCcc--cchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+  +-||.+++++|+++|++|++.+|+.... +.+.     .+.+......++++|+.|.+++.++++..     ++
T Consensus        16 tGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~-----~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~l   89 (258)
T PRK07533         16 VGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVE-----PLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGRL   89 (258)
T ss_pred             ECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHH-----HHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCCC
Confidence            6887  4999999999999999999999875321 1111     01111123567899999998888776532     68


Q ss_pred             cEEEecCCCCcc------------------------c----HHHHHHhCCCCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |++||+||....                        +    ++.++..++...++|++||......          .+..
T Consensus        90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~----------~~~~  159 (258)
T PRK07533         90 DFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKV----------VENY  159 (258)
T ss_pred             CEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccC----------Cccc
Confidence            999999986310                        0    1223333433357889988643210          0011


Q ss_pred             CcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ..|..+|...+.+.+       ..++++..+.||.+-.+.... ..............+.         ..+...+|+|.
T Consensus       160 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva~  230 (258)
T PRK07533        160 NLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPL---------RRLVDIDDVGA  230 (258)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCc---------CCCCCHHHHHH
Confidence            123388888776553       357999999999886653111 0011111222211111         12456899999


Q ss_pred             HHHHHHcCC--ccCCceEEecCC
Q 023110          198 AFVQVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~  218 (287)
                      +++.++...  ...|+.+.+.++
T Consensus       231 ~~~~L~s~~~~~itG~~i~vdgg  253 (258)
T PRK07533        231 VAAFLASDAARRLTGNTLYIDGG  253 (258)
T ss_pred             HHHHHhChhhccccCcEEeeCCc
Confidence            999998653  236777777665

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.11  E-value=9.6e-09  Score=83.91  Aligned_cols=191  Identities=15%  Similarity=0.134  Sum_probs=115.5

Q ss_pred             CCc--ccchHHHHHHHHHHcCCeEEEEEcCCcc-ccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CC
Q 023110            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG   72 (287)
Q Consensus         1 tGa--tG~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~   72 (287)
                      |||  ++-||.+++++|.++|++|++++|+... ..+.+.       .+....+.++++|+.|++++.++++.     .+
T Consensus        13 tGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~-------~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889         13 TGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIA-------KRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             eCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHH-------HhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            688  8999999999999999999999886421 111111       01123577899999999988877653     26


Q ss_pred             ccEEEecCCCCcc------------------------c----HHHHHHhCCCCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           73 FDVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      +|++||+||....                        +    ++.++..++...++|++|+....            ...
T Consensus        86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~------------~~~  153 (256)
T PRK07889         86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV------------AWP  153 (256)
T ss_pred             CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc------------cCC
Confidence            9999999986421                        0    11233333333578888753211            001


Q ss_pred             CCc-chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          125 PKS-RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       125 ~~~-~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      ... |..+|...+.+.+       ..++++..+.||.+-.+..... .............++        .+.+...+|+
T Consensus       154 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~~~~~~p~ev  225 (256)
T PRK07889        154 AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPL--------GWDVKDPTPV  225 (256)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCcc--------ccccCCHHHH
Confidence            112 3388888776553       3579999999998876531100 001111111111111        0124678999


Q ss_pred             HHHHHHHHcCCc--cCCceEEecCC
Q 023110          196 ARAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~  218 (287)
                      |++++.++....  ..|..+.+.++
T Consensus       226 A~~v~~l~s~~~~~~tG~~i~vdgg  250 (256)
T PRK07889        226 ARAVVALLSDWFPATTGEIVHVDGG  250 (256)
T ss_pred             HHHHHHHhCcccccccceEEEEcCc
Confidence            999999987532  35667777665

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.10  E-value=1.9e-09  Score=95.37  Aligned_cols=190  Identities=17%  Similarity=0.158  Sum_probs=115.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||.++++.|.++|++|++++|.....  .+.     .... ..+...+.+|+.|.+++..+++..     ++|+
T Consensus       216 tGasggIG~~la~~l~~~Ga~vi~~~~~~~~~--~l~-----~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        216 TGAARGIGAAIAEVLARDGAHVVCLDVPAAGE--ALA-----AVAN-RVGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCccHH--HHH-----HHHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            79999999999999999999999998854321  000     0000 123467899999998887776632     5899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhCC------CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+++...                    .++.++.+++.      +..+||++||...+....          ....|.
T Consensus       288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~----------~~~~Y~  357 (450)
T PRK08261        288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR----------GQTNYA  357 (450)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC----------CChHHH
Confidence            999998631                    12333444332      336899999876432111          112244


Q ss_pred             hhhHHHHHHh-------hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+.       ...++.+..+.||.+-.+... .+ +........  ......      .....+|+|+++..+
T Consensus       358 asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~-~~-~~~~~~~~~--~~~~l~------~~~~p~dva~~~~~l  427 (450)
T PRK08261        358 ASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTA-AI-PFATREAGR--RMNSLQ------QGGLPVDVAETIAWL  427 (450)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhh-cc-chhHHHHHh--hcCCcC------CCCCHHHHHHHHHHH
Confidence            8888665544       245899999999987543211 00 111111111  110001      123367999999988


Q ss_pred             HcCC--ccCCceEEecCC
Q 023110          203 LGNE--KASRQVFNISGE  218 (287)
Q Consensus       203 ~~~~--~~~~~~~~i~~~  218 (287)
                      +...  ..+|+.+.++++
T Consensus       428 ~s~~~~~itG~~i~v~g~  445 (450)
T PRK08261        428 ASPASGGVTGNVVRVCGQ  445 (450)
T ss_pred             hChhhcCCCCCEEEECCC
Confidence            8643  236778888764

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.10  E-value=7e-09  Score=85.52  Aligned_cols=194  Identities=11%  Similarity=0.068  Sum_probs=117.0

Q ss_pred             CCcc--cchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCc
Q 023110            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~   73 (287)
                      |||+  +-||+++++.|.++|++|++.+|+... .+.+..    ...+.... ..+++|+.|.+++.++++.     .++
T Consensus        11 tGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~-~~~~~~----~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~i   84 (274)
T PRK08415         11 VGVANNKSIAYGIAKACFEQGAELAFTYLNEAL-KKRVEP----IAQELGSD-YVYELDVSKPEHFKSLAESLKKDLGKI   84 (274)
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH-HHHHHH----HHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            6886  799999999999999999999887421 111110    00111123 5789999999888877753     268


Q ss_pred             cEEEecCCCCcc------------------------c----HHHHHHhCCCCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |++||+||....                        +    ++.++..+....++|++||.......          +..
T Consensus        85 DilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~----------~~~  154 (274)
T PRK08415         85 DFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYV----------PHY  154 (274)
T ss_pred             CEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCC----------Ccc
Confidence            999999986310                        0    22233344433689999986532110          011


Q ss_pred             CcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ..|..+|...+.+.+       ..++++..+.||.+..+.... .-..........  ..+       ..-+...+|+|.
T Consensus       155 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~p-------l~r~~~pedva~  225 (274)
T PRK08415        155 NVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEI--NAP-------LKKNVSIEEVGN  225 (274)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhh--hCc-------hhccCCHHHHHH
Confidence            123488888776553       357999999999887652110 000000000000  111       112466899999


Q ss_pred             HHHHHHcCC--ccCCceEEecCCc
Q 023110          198 AFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      +++.++...  ...|+.+.+.++.
T Consensus       226 ~v~fL~s~~~~~itG~~i~vdGG~  249 (274)
T PRK08415        226 SGMYLLSDLSSGVTGEIHYVDAGY  249 (274)
T ss_pred             HHHHHhhhhhhcccccEEEEcCcc
Confidence            999998643  3367778887764

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.10  E-value=1.5e-08  Score=83.04  Aligned_cols=194  Identities=14%  Similarity=0.103  Sum_probs=116.3

Q ss_pred             CCccc--chHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||++  -||+++++.|.++|++|++.+|+... .+.+.     .+.........+.+|+.|+++++++++..     ++
T Consensus        12 TGas~~~GIG~aia~~la~~G~~vil~~r~~~~-~~~~~-----~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   85 (262)
T PRK07984         12 TGVASKLSIAYGIAQAMHREGAELAFTYQNDKL-KGRVE-----EFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKF   85 (262)
T ss_pred             eCCCCCccHHHHHHHHHHHCCCEEEEEecchhH-HHHHH-----HHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCC
Confidence            68875  89999999999999999998887311 11111     11111234567899999999888877532     58


Q ss_pred             cEEEecCCCCcc-------------------------cHHHHHHh----CCCCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD-------------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        74 d~vi~~a~~~~~-------------------------~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      |++||++|....                         +...+.++    ++...++|++||......          .+.
T Consensus        86 D~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~----------~~~  155 (262)
T PRK07984         86 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA----------IPN  155 (262)
T ss_pred             CEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCC----------CCC
Confidence            999999985210                         00112222    222357889988653210          011


Q ss_pred             CCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ...|..+|...+.+.+       ..++++..+.||.+..+.... .-............+.         .-+...+|++
T Consensus       156 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva  226 (262)
T PRK07984        156 YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---------RRTVTIEDVG  226 (262)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC---------cCCCCHHHHH
Confidence            1224488998887663       357999999999886542110 0001111111111111         1245689999


Q ss_pred             HHHHHHHcCC--ccCCceEEecCCc
Q 023110          197 RAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      .+++.++...  ...|..+.+.++.
T Consensus       227 ~~~~~L~s~~~~~itG~~i~vdgg~  251 (262)
T PRK07984        227 NSAAFLCSDLSAGISGEVVHVDGGF  251 (262)
T ss_pred             HHHHHHcCcccccccCcEEEECCCc
Confidence            9999998653  2367777777664

>PRK06484 short chain dehydrogenase; Validated

Probab=99.09  E-value=1.7e-09  Score=97.44  Aligned_cols=178  Identities=15%  Similarity=0.194  Sum_probs=112.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||++.||.+++++|.++|++|++++|+.....+...        +...++.++.+|+.+++++.++++.     .++|+
T Consensus        11 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484         11 TGAAGGIGRAACQRFARAGDQVVVADRNVERARERAD--------SLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998665321111        1124577899999999988887764     26999


Q ss_pred             EEecCCCCc----------------------cc----HHHHHHhCC--CC-ccEEEEecceeeccCCCCCCCCCCCCCCC
Q 023110           76 VYDINGREA----------------------DE----VEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        76 vi~~a~~~~----------------------~~----~~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (287)
                      +||++|...                      .+    ++.++..+.  +. .++|++||........          ...
T Consensus        83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~----------~~~  152 (520)
T PRK06484         83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALP----------KRT  152 (520)
T ss_pred             EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCC----------CCc
Confidence            999998620                      01    222333332  22 3899999876532211          112


Q ss_pred             cchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhH-HH-HHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WF-FHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      .|..+|...+.+.+       ..+++++.+.||.+-.+........ .. ......  .++       ...+...+|++.
T Consensus       153 ~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~va~  223 (520)
T PRK06484        153 AYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRS--RIP-------LGRLGRPEEIAE  223 (520)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHh--cCC-------CCCCcCHHHHHH
Confidence            24488888877653       3579999999998866531100000 00 000000  011       112456899999


Q ss_pred             HHHHHHcC
Q 023110          198 AFVQVLGN  205 (287)
Q Consensus       198 ~~~~~~~~  205 (287)
                      ++..++..
T Consensus       224 ~v~~l~~~  231 (520)
T PRK06484        224 AVFFLASD  231 (520)
T ss_pred             HHHHHhCc
Confidence            99988764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.08  E-value=1.3e-08  Score=83.37  Aligned_cols=194  Identities=10%  Similarity=0.040  Sum_probs=115.6

Q ss_pred             CCccc--chHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCc
Q 023110            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~   73 (287)
                      |||++  -||.++++.|.++|++|++..|+... .+.+.     .+........++++|+.|++++.++++.     .++
T Consensus        14 TGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~-~~~~~-----~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   87 (260)
T PRK06603         14 TGIANNMSISWAIAQLAKKHGAELWFTYQSEVL-EKRVK-----PLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSF   87 (260)
T ss_pred             ECCCCCcchHHHHHHHHHHcCCEEEEEeCchHH-HHHHH-----HHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            68986  79999999999999999998887321 11111     0100012234578999999988877753     259


Q ss_pred             cEEEecCCCCc---------c---------------cHHHHHH----hCCCCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREA---------D---------------EVEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~---------~---------------~~~~ll~----~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |++||+++...         +               +...+++    .++...++|++||.......          +..
T Consensus        88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~----------~~~  157 (260)
T PRK06603         88 DFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVI----------PNY  157 (260)
T ss_pred             cEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCC----------Ccc
Confidence            99999987521         0               0111222    23333589999986542110          111


Q ss_pred             CcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ..|..+|...+.+.+       ..++++..+.||.+-.+.... .-............+.         ..+...+|+|+
T Consensus       158 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~  228 (260)
T PRK06603        158 NVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL---------KRNTTQEDVGG  228 (260)
T ss_pred             cchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc---------CCCCCHHHHHH
Confidence            124488888776553       467999999999886552110 0001111111111111         12456899999


Q ss_pred             HHHHHHcCCc--cCCceEEecCCc
Q 023110          198 AFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      +++.++....  ..|..+.+.++.
T Consensus       229 ~~~~L~s~~~~~itG~~i~vdgG~  252 (260)
T PRK06603        229 AAVYLFSELSKGVTGEIHYVDCGY  252 (260)
T ss_pred             HHHHHhCcccccCcceEEEeCCcc
Confidence            9999987532  367777777653

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.08  E-value=5.6e-09  Score=86.03  Aligned_cols=195  Identities=10%  Similarity=0.088  Sum_probs=116.8

Q ss_pred             CCcc--cchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+  +-||.+++++|.++|++|++..|+... .+.+.     .+.+.......+++|+.|++++.++++..     .+
T Consensus        16 tGas~~~GIG~aia~~la~~G~~V~l~~r~~~~-~~~~~-----~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   89 (272)
T PRK08159         16 LGVANNRSIAWGIAKACRAAGAELAFTYQGDAL-KKRVE-----PLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKL   89 (272)
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH-HHHHH-----HHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            6886  799999999999999999988776321 11111     01110123567899999999888877642     58


Q ss_pred             cEEEecCCCCcc------------------------cHHHHHH----hCCCCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD------------------------EVEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~ll~----~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |++||+||....                        +...+++    .+.+..++|++||......          .+.-
T Consensus        90 D~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~----------~p~~  159 (272)
T PRK08159         90 DFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKV----------MPHY  159 (272)
T ss_pred             cEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccC----------CCcc
Confidence            999999986310                        1112222    2333368899998543210          0111


Q ss_pred             CcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ..|..+|...+.+.+       ..++++..+.||.+..+.... .-....... ... ..+.       .-+...+|+|+
T Consensus       160 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~-~~~-~~p~-------~r~~~peevA~  230 (272)
T PRK08159        160 NVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKW-NEY-NAPL-------RRTVTIEEVGD  230 (272)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHH-HHh-CCcc-------cccCCHHHHHH
Confidence            123488888776653       357999999999886542100 000000000 000 1111       12467899999


Q ss_pred             HHHHHHcCC--ccCCceEEecCCcc
Q 023110          198 AFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      +++.++...  ..+|..+.+.++..
T Consensus       231 ~~~~L~s~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        231 SALYLLSDLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             HHHHHhCccccCccceEEEECCCce
Confidence            999998643  23677888888753

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.07  E-value=1.7e-09  Score=88.34  Aligned_cols=184  Identities=14%  Similarity=0.074  Sum_probs=109.1

Q ss_pred             CCcccchHHHHHHHHHH----cCCeEEEEEcCCccccccCCCCChhhhhh--hcCCeEEEEecCCChHHHHhhhhcC---
Q 023110            1 MGGTRFIGVFLSRLLVK----EGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK---   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~D~~d~~~~~~~~~~~---   71 (287)
                      |||++.||.+++++|.+    .|++|++++|+.....+...     .+..  ....+.++.+|+.+.+++.++++..   
T Consensus         6 tGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         6 TGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKA-----EIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             ecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHH-----HHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            79999999999999997    79999999998654221111     1111  0235788999999998887766521   


Q ss_pred             ------CccEEEecCCCCc------c---c------------------HHHHHHhCC---C-CccEEEEecceeeccCCC
Q 023110           72 ------GFDVVYDINGREA------D---E------------------VEPILDALP---N-LEQFIYCSSAGVYLKSDL  114 (287)
Q Consensus        72 ------~~d~vi~~a~~~~------~---~------------------~~~ll~~~~---~-~~~~i~~Ss~~v~~~~~~  114 (287)
                            +.|++||+||...      .   .                  ++.++..+.   + ..++|++||...+...  
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~--  158 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPF--  158 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCC--
Confidence                  2368999998521      0   0                  122334433   1 2579999997653211  


Q ss_pred             CCCCCCCCCCCCc-chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCce
Q 023110          115 LPHCETDTVDPKS-RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV  186 (287)
Q Consensus       115 ~~~~e~~~~~~~~-~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (287)
                               .... |..+|...+.+.+       ..++.+..+.||.+-.+.     .......................
T Consensus       159 ---------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~-----~~~~~~~~~~~~~~~~~~~~~~~  224 (256)
T TIGR01500       159 ---------KGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDM-----QQQVREESVDPDMRKGLQELKAK  224 (256)
T ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchH-----HHHHHHhcCChhHHHHHHHHHhc
Confidence                     1112 3488998877653       357899999999886542     11110000000000000000001


Q ss_pred             eeeeeHHHHHHHHHHHHcC
Q 023110          187 TQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~  205 (287)
                      ..+...+|+|.+++.++.+
T Consensus       225 ~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       225 GKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             CCCCCHHHHHHHHHHHHhc
Confidence            1256789999999999864

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.06  E-value=3.3e-09  Score=91.33  Aligned_cols=73  Identities=16%  Similarity=0.169  Sum_probs=58.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+|+||++++++|.++|++|++++|+.........        .....+..+.+|+.|.+++.+.+.  ++|++||++
T Consensus       184 TGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~--------~~~~~v~~v~~Dvsd~~~v~~~l~--~IDiLInnA  253 (406)
T PRK07424        184 TGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN--------GEDLPVKTLHWQVGQEAALAELLE--KVDILIINH  253 (406)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh--------hcCCCeEEEEeeCCCHHHHHHHhC--CCCEEEECC
Confidence            7999999999999999999999999998654221111        001246788999999999999887  899999999


Q ss_pred             CCC
Q 023110           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      |..
T Consensus       254 Gi~  256 (406)
T PRK07424        254 GIN  256 (406)
T ss_pred             CcC
Confidence            863

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.06  E-value=1.3e-09  Score=88.16  Aligned_cols=125  Identities=21%  Similarity=0.140  Sum_probs=87.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcC-CeEEEEecCCChHHHHhhhhc-----CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~D~~d~~~~~~~~~~-----~~~d   74 (287)
                      ||||..||.+++.+|.++|.+++.+.|.........+    ...+.+.. ++..+++|+.|.++..++++.     .++|
T Consensus        18 TGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~----~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vD   93 (282)
T KOG1205|consen   18 TGASSGIGEALAYELAKRGAKLVLVARRARRLERVAE----ELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRVD   93 (282)
T ss_pred             eCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHH----HHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCCC
Confidence            8999999999999999999998888887766321101    01111123 499999999999888877632     2899


Q ss_pred             EEEecCCCCcc------------------------cHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~------------------------~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      ++||+||....                        -|+.++..++  +..++|.+||..-+-..+.          ..-|
T Consensus        94 vLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~----------~~~Y  163 (282)
T KOG1205|consen   94 VLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF----------RSIY  163 (282)
T ss_pred             EEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc----------cccc
Confidence            99999998421                        1555666666  4479999999775422111          1124


Q ss_pred             hhhhHHHHHHh
Q 023110          129 HKGKLNTESVL  139 (287)
Q Consensus       129 ~~~k~~~E~~~  139 (287)
                      ..||.+.+.+.
T Consensus       164 ~ASK~Al~~f~  174 (282)
T KOG1205|consen  164 SASKHALEGFF  174 (282)
T ss_pred             chHHHHHHHHH
Confidence            59999988776

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.03  E-value=1.3e-08  Score=83.24  Aligned_cols=194  Identities=13%  Similarity=0.126  Sum_probs=115.8

Q ss_pred             CCc--ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCc
Q 023110            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGa--tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~   73 (287)
                      |||  ++-||.+++++|+++|++|++..|.... .+.+.     .+.........+.+|+.|++++.++++.     .++
T Consensus        12 tGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (260)
T PRK06997         12 TGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRIT-----EFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGL   85 (260)
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHHH-----HHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCC
Confidence            675  6799999999999999999988764221 11111     0000012234688999999988887764     269


Q ss_pred             cEEEecCCCCc---------cc--------------------HHHHHHhCCCCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREA---------DE--------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        74 d~vi~~a~~~~---------~~--------------------~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      |++||+||...         ..                    ++.++..+.+..++|++||....-.          .+.
T Consensus        86 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~----------~~~  155 (260)
T PRK06997         86 DGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERV----------VPN  155 (260)
T ss_pred             cEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccC----------CCC
Confidence            99999998631         00                    1223333333368999998654210          011


Q ss_pred             CCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ...|..+|...+.+.+       ..++++..+.||.+-.+...... ...........  .+.       .-+...+|++
T Consensus       156 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~-------~r~~~pedva  226 (260)
T PRK06997        156 YNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESN--APL-------RRNVTIEEVG  226 (260)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhc--Ccc-------cccCCHHHHH
Confidence            1124488988876653       35799999999988664211000 01111111111  111       1246689999


Q ss_pred             HHHHHHHcCC--ccCCceEEecCCc
Q 023110          197 RAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      +++..++...  ..+|+.+.+.++.
T Consensus       227 ~~~~~l~s~~~~~itG~~i~vdgg~  251 (260)
T PRK06997        227 NVAAFLLSDLASGVTGEITHVDSGF  251 (260)
T ss_pred             HHHHHHhCccccCcceeEEEEcCCh
Confidence            9999998753  2367777776653

>PRK05599 hypothetical protein; Provisional

Probab=99.03  E-value=1.2e-08  Score=82.84  Aligned_cols=179  Identities=19%  Similarity=0.222  Sum_probs=113.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh-cCCeEEEEecCCChHHHHhhhhc-----CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~D~~d~~~~~~~~~~-----~~~d   74 (287)
                      |||++.||.+++++|. +|++|++++|+.+...+...     .+.+. ...+.++.+|+.|.+++.++++.     .++|
T Consensus         6 tGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          6 LGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLAS-----DLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             EeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHH-----HHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            6999999999999998 59999999998765321111     11111 12477899999999888877653     2689


Q ss_pred             EEEecCCCCccc------------------------HHHHHHhCC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           75 VVYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~~~------------------------~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      ++||++|.....                        +..++..+.  + ..++|++||...+-..          +....
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~----------~~~~~  149 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR----------RANYV  149 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC----------cCCcc
Confidence            999999873110                        111223332  2 3689999997543111          11112


Q ss_pred             chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      |..+|...+.+.+       ..++++..+.||.+..+...            ...+.+         -....+|+|++++
T Consensus       150 Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~------------~~~~~~---------~~~~pe~~a~~~~  208 (246)
T PRK05599        150 YGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTT------------GMKPAP---------MSVYPRDVAAAVV  208 (246)
T ss_pred             hhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhc------------CCCCCC---------CCCCHHHHHHHHH
Confidence            4488887766542       35789999999988665200            000000         0246899999999


Q ss_pred             HHHcCCccCCceEEecC
Q 023110          201 QVLGNEKASRQVFNISG  217 (287)
Q Consensus       201 ~~~~~~~~~~~~~~i~~  217 (287)
                      ..+..+.. +..+.+..
T Consensus       209 ~~~~~~~~-~~~~~~~~  224 (246)
T PRK05599        209 SAITSSKR-STTLWIPG  224 (246)
T ss_pred             HHHhcCCC-CceEEeCc
Confidence            99987643 34455544

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.01  E-value=4.9e-09  Score=88.23  Aligned_cols=191  Identities=14%  Similarity=0.135  Sum_probs=112.2

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d   74 (287)
                      |||++.||.+++++|+++| ++|++++|+.....+...     .+......+.++.+|+.+.+++.++++.     .++|
T Consensus         9 TGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD   83 (314)
T TIGR01289         9 TGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAK-----SLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLD   83 (314)
T ss_pred             ECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-----HhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            7999999999999999999 999999998654221111     0111124577889999999888777653     2699


Q ss_pred             EEEecCCCCcc---------------------c----HHHHHHhCC-C---CccEEEEecceeeccCC----CCC-----
Q 023110           75 VVYDINGREAD---------------------E----VEPILDALP-N---LEQFIYCSSAGVYLKSD----LLP-----  116 (287)
Q Consensus        75 ~vi~~a~~~~~---------------------~----~~~ll~~~~-~---~~~~i~~Ss~~v~~~~~----~~~-----  116 (287)
                      ++||+||....                     +    ++.++..+. .   ..++|++||...+....    ..+     
T Consensus        84 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  163 (314)
T TIGR01289        84 ALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGD  163 (314)
T ss_pred             EEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccccc
Confidence            99999986210                     0    223344443 2   36999999987653210    000     


Q ss_pred             -------------CCCCCCCCCCc-chhhhHHHHHHh----h----hCCCcEEEEecCeeec-CCCCC--ChhHHHHHHH
Q 023110          117 -------------HCETDTVDPKS-RHKGKLNTESVL----E----SKGVNWTSLRPVYIYG-PLNYN--PVEEWFFHRL  171 (287)
Q Consensus       117 -------------~~e~~~~~~~~-~~~~k~~~E~~~----~----~~~~~~~ilR~~~v~g-~~~~~--~~~~~~~~~~  171 (287)
                                   ..+.....+.. |..+|.....+.    +    ..++.++.++||.|.. +....  .....+....
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~  243 (314)
T TIGR01289       164 LSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPPF  243 (314)
T ss_pred             cccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHHH
Confidence                         00111112222 338888754432    1    1468899999998853 22111  1111111111


Q ss_pred             HcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC
Q 023110          172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (287)
                      ..   ..       ...+.+.++.|+.++.++...
T Consensus       244 ~~---~~-------~~~~~~~~~~a~~l~~~~~~~  268 (314)
T TIGR01289       244 QK---YI-------TKGYVSEEEAGERLAQVVSDP  268 (314)
T ss_pred             HH---HH-------hccccchhhhhhhhHHhhcCc
Confidence            00   00       012466888998888877653

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.01  E-value=4.4e-09  Score=88.62  Aligned_cols=171  Identities=15%  Similarity=0.138  Sum_probs=106.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh--cCCeEEEEecCCC--hHHHH---hhhhcCCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKD--YDFVK---SSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~D~~d--~~~~~---~~~~~~~~   73 (287)
                      |||||.||++++++|.++|++|++++|+.+...+...     .+...  ...+..+.+|+.+  .+.+.   +.+...++
T Consensus        59 TGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~-----~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~di  133 (320)
T PLN02780         59 TGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSD-----SIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLDV  133 (320)
T ss_pred             eCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-----HHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCCc
Confidence            7999999999999999999999999998765321111     11111  1356778899974  33333   33332356


Q ss_pred             cEEEecCCCCcc----------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~----------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |++||+||....                      +    ++.++..+.  +..++|++||...+....        .+..
T Consensus       134 dilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~--------~p~~  205 (320)
T PLN02780        134 GVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPS--------DPLY  205 (320)
T ss_pred             cEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC--------Cccc
Confidence            699999986310                      1    222333332  557899999976532100        0111


Q ss_pred             CcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      ..|..+|...+.+.+       ..|+++..+.||.+-.+...          . ....          ......+++|+.
T Consensus       206 ~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~----------~-~~~~----------~~~~~p~~~A~~  264 (320)
T PLN02780        206 AVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS----------I-RRSS----------FLVPSSDGYARA  264 (320)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc----------c-cCCC----------CCCCCHHHHHHH
Confidence            224489998876653       35899999999988665210          0 0000          113468999999


Q ss_pred             HHHHHcC
Q 023110          199 FVQVLGN  205 (287)
Q Consensus       199 ~~~~~~~  205 (287)
                      ++..+..
T Consensus       265 ~~~~~~~  271 (320)
T PLN02780        265 ALRWVGY  271 (320)
T ss_pred             HHHHhCC
Confidence            9999854

>PLN00015 protochlorophyllide reductase

Probab=99.00  E-value=3.5e-09  Score=88.93  Aligned_cols=104  Identities=15%  Similarity=0.130  Sum_probs=72.7

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d   74 (287)
                      |||++.||.+++++|.++| ++|++.+|+..........     +......+.++.+|+.|.+++.++++.     ..+|
T Consensus         3 TGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~-----l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD   77 (308)
T PLN00015          3 TGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKS-----AGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD   77 (308)
T ss_pred             eCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH-----hcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence            7999999999999999999 9999999986542211110     000123577889999999888777653     2589


Q ss_pred             EEEecCCCCcc---------------------c----HHHHHHhCC--C--CccEEEEecceee
Q 023110           75 VVYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVY  109 (287)
Q Consensus        75 ~vi~~a~~~~~---------------------~----~~~ll~~~~--~--~~~~i~~Ss~~v~  109 (287)
                      ++||+||....                     +    ++.++..+.  +  ..++|++||...+
T Consensus        78 ~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~  141 (308)
T PLN00015         78 VLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN  141 (308)
T ss_pred             EEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence            99999986310                     0    223444443  2  4699999997653

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.99  E-value=5.1e-09  Score=80.23  Aligned_cols=141  Identities=17%  Similarity=0.166  Sum_probs=93.1

Q ss_pred             CCcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      +||+|++|.+++++|.++|+ .|+.++|+......... . ...+.....++.++.+|+.+.+.+.++++..     .+|
T Consensus         6 ~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~-~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   83 (180)
T smart00822        6 TGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAE-L-LAELEALGAEVTVVACDVADRAALAAALAAIPARLGPLR   83 (180)
T ss_pred             EcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHH-H-HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCee
Confidence            69999999999999999986 68888887544211100 0 0111111346778999999988888776532     469


Q ss_pred             EEEecCCCC--------------------cccHHHHHHhCC--CCccEEEEeccee-eccCCCCCCCCCCCCCCCcchhh
Q 023110           75 VVYDINGRE--------------------ADEVEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRHKG  131 (287)
Q Consensus        75 ~vi~~a~~~--------------------~~~~~~ll~~~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~~~~~  131 (287)
                      .|||+++..                    ..+...+++++.  +.+++|++||... ++..           ....|..+
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~-----------~~~~y~~s  152 (180)
T smart00822       84 GVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNP-----------GQANYAAA  152 (180)
T ss_pred             EEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCC-----------CchhhHHH
Confidence            999999852                    223455666665  5678999988654 2211           11123477


Q ss_pred             hHHHHHHhh---hCCCcEEEEecCee
Q 023110          132 KLNTESVLE---SKGVNWTSLRPVYI  154 (287)
Q Consensus       132 k~~~E~~~~---~~~~~~~ilR~~~v  154 (287)
                      |...+.+++   ..+++++.+.||.+
T Consensus       153 k~~~~~~~~~~~~~~~~~~~~~~g~~  178 (180)
T smart00822      153 NAFLDALAAHRRARGLPATSINWGAW  178 (180)
T ss_pred             HHHHHHHHHHHHhcCCceEEEeeccc
Confidence            888887763   46788888888764

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=98.94  E-value=2.8e-08  Score=76.49  Aligned_cols=202  Identities=13%  Similarity=0.155  Sum_probs=123.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccc--ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      ||+.|-||.++.++|+++|..+.++.-+.+.+.  ..+.+..      ....+-|+++|+.+..++++++++.     ..
T Consensus        11 tggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~------p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~i   84 (261)
T KOG4169|consen   11 TGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAIN------PSVSVIFIKCDVTNRGDLEAAFDKILATFGTI   84 (261)
T ss_pred             ecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccC------CCceEEEEEeccccHHHHHHHHHHHHHHhCce
Confidence            699999999999999999998888877665521  1121111      1357889999999998888888753     69


Q ss_pred             cEEEecCCCC----------------cccHHHHHHhCC-----CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhh
Q 023110           74 DVVYDINGRE----------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (287)
Q Consensus        74 d~vi~~a~~~----------------~~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k  132 (287)
                      |++||.||..                +.++...+.++.     ...-+|.+||..-+.+.+-.|+.-.+...-.+..+|.
T Consensus        85 DIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTRSl  164 (261)
T KOG4169|consen   85 DILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRSL  164 (261)
T ss_pred             EEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeehhh
Confidence            9999999984                233555666665     1235889998554332222222111111111111221


Q ss_pred             HHHHHHhhhCCCcEEEEecCeeecCCCCCChhHHHHHHHHc-CCCccCCC---CCCceeeeeeHHHHHHHHHHHHcCCcc
Q 023110          133 LNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-GRPIPIPG---SGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       133 ~~~E~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (287)
                      . -+.+.+++|+++..+.||.+-.         .+++.+.+ +.-+....   +.-.........+++..++.+++.+. 
T Consensus       165 a-~~ayy~~sGV~~~avCPG~t~t---------~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~~~-  233 (261)
T KOG4169|consen  165 A-DLAYYQRSGVRFNAVCPGFTRT---------DLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEYPK-  233 (261)
T ss_pred             h-hhhhHhhcCEEEEEECCCcchH---------HHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhhcc-
Confidence            1 2344577899999999986422         12222222 11111000   00011234457889999999998866 


Q ss_pred             CCceEEecCCc
Q 023110          209 SRQVFNISGEK  219 (287)
Q Consensus       209 ~~~~~~i~~~~  219 (287)
                      +|.+|.+..+.
T Consensus       234 NGaiw~v~~g~  244 (261)
T KOG4169|consen  234 NGAIWKVDSGS  244 (261)
T ss_pred             CCcEEEEecCc
Confidence            78899888764

>PRK08862 short chain dehydrogenase; Provisional

Probab=98.93  E-value=1.4e-08  Score=81.38  Aligned_cols=139  Identities=8%  Similarity=0.088  Sum_probs=93.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----C-Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----K-GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~-~~d   74 (287)
                      |||++-||++++++|.++|++|+++.|+.+...+...     ...+...++..+.+|+.+++++.++++.     . ++|
T Consensus        11 tGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~-----~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD   85 (227)
T PRK08862         11 TSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYE-----QCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPD   85 (227)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----HHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCC
Confidence            7999999999999999999999999998765322111     1111124577888999999888877653     2 689


Q ss_pred             EEEecCCCCc----------cc---------------HHHHHHhCC--C-CccEEEEecceeeccCCCCCCCCCCCCCCC
Q 023110           75 VVYDINGREA----------DE---------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        75 ~vi~~a~~~~----------~~---------------~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (287)
                      ++||++|...          ..               .+.++..+.  + ...+|++||...+             +...
T Consensus        86 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-------------~~~~  152 (227)
T PRK08862         86 VLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-------------QDLT  152 (227)
T ss_pred             EEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-------------CCcc
Confidence            9999997310          00               111223332  2 3589999985421             0112


Q ss_pred             cchhhhHHHHHHhh-------hCCCcEEEEecCeeecC
Q 023110          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~  157 (287)
                      .|..+|...+.+.+       ..++++..|.||.+-.+
T Consensus       153 ~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        153 GVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            24488888776552       45899999999987665

>PRK08303 short chain dehydrogenase; Provisional

Probab=98.83  E-value=5.8e-08  Score=81.29  Aligned_cols=189  Identities=12%  Similarity=0.039  Sum_probs=109.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccc------cCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC---
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ------QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~---   71 (287)
                      |||++.||.+++++|++.|++|++++|+......      .+.. ....+......+.++++|+.|++++..+++..   
T Consensus        14 TGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   92 (305)
T PRK08303         14 AGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEE-TAELVTAAGGRGIAVQVDHLVPEQVRALVERIDRE   92 (305)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHH-HHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            7999999999999999999999999998542110      0000 00111111235778999999998888777642   


Q ss_pred             --CccEEEecC-CCC----c-c-------------------c----HHHHHHhCC--CCccEEEEeccee-eccCCCCCC
Q 023110           72 --GFDVVYDIN-GRE----A-D-------------------E----VEPILDALP--NLEQFIYCSSAGV-YLKSDLLPH  117 (287)
Q Consensus        72 --~~d~vi~~a-~~~----~-~-------------------~----~~~ll~~~~--~~~~~i~~Ss~~v-~~~~~~~~~  117 (287)
                        ++|++||++ +..    . .                   +    ++.++..+.  +..++|++||... +....    
T Consensus        93 ~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~~----  168 (305)
T PRK08303         93 QGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATH----  168 (305)
T ss_pred             cCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCcC----
Confidence              689999998 631    0 0                   0    122333343  3468999998543 11100    


Q ss_pred             CCCCCCCCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCc-cCCC-CCCceee
Q 023110          118 CETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPG-SGIQVTQ  188 (287)
Q Consensus       118 ~e~~~~~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~  188 (287)
                          ......|..+|.....+.+       ..++++..|.||.+-.+.     ......  ...... .... .+. ..-
T Consensus       169 ----~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~-----~~~~~~--~~~~~~~~~~~~~p~-~~~  236 (305)
T PRK08303        169 ----YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEM-----MLDAFG--VTEENWRDALAKEPH-FAI  236 (305)
T ss_pred             ----CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHH-----HHHhhc--cCccchhhhhccccc-ccc
Confidence                0011124488888776553       357999999999875541     100000  000000 0000 000 011


Q ss_pred             eeeHHHHHHHHHHHHcCC
Q 023110          189 LGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       189 ~i~~~D~a~~~~~~~~~~  206 (287)
                      +...+|+|.+++.++...
T Consensus       237 ~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        237 SETPRYVGRAVAALAADP  254 (305)
T ss_pred             CCCHHHHHHHHHHHHcCc
Confidence            336899999999998654

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.77  E-value=5.1e-08  Score=81.05  Aligned_cols=154  Identities=20%  Similarity=0.100  Sum_probs=99.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      ||||..||.+++++|..+|.+|+...|+.....+...++..   ......+.++++|+.+..+++++.+.     ...|+
T Consensus        41 TGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~---~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldv  117 (314)
T KOG1208|consen   41 TGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQK---GKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDV  117 (314)
T ss_pred             ECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh---cCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccE
Confidence            79999999999999999999999999998542221111100   11135788899999999888777653     37899


Q ss_pred             EEecCCCCcc------------------c----HHHHHHhCC--CCccEEEEecceeeccC--CCCCCCCCCC-CCCCc-
Q 023110           76 VYDINGREAD------------------E----VEPILDALP--NLEQFIYCSSAGVYLKS--DLLPHCETDT-VDPKS-  127 (287)
Q Consensus        76 vi~~a~~~~~------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~--~~~~~~e~~~-~~~~~-  127 (287)
                      .|++||+...                  +    +..|++.++  ...|+|++||..- +..  -...-.|... ..... 
T Consensus       118 LInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~~~~~~~  196 (314)
T KOG1208|consen  118 LINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAKLYSSDAA  196 (314)
T ss_pred             EEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhccCccchhH
Confidence            9999998311                  1    455666666  2279999999654 111  1111111111 11111 


Q ss_pred             chhhhHHHHHHh----hh--CCCcEEEEecCeeecCC
Q 023110          128 RHKGKLNTESVL----ES--KGVNWTSLRPVYIYGPL  158 (287)
Q Consensus       128 ~~~~k~~~E~~~----~~--~~~~~~ilR~~~v~g~~  158 (287)
                      |..+|.....+.    +.  .|+.+..+-||.+.++.
T Consensus       197 Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~  233 (314)
T KOG1208|consen  197 YALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG  233 (314)
T ss_pred             HHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence            337777543222    22  27999999999998774

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=98.77  E-value=3.2e-07  Score=75.07  Aligned_cols=204  Identities=15%  Similarity=0.144  Sum_probs=121.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhh----c--CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----A--KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----~--~~~d   74 (287)
                      ||++.-||+++++.|.+.|.+|+..+|+.+........+..  .......+..+.+|+.+.++..++++    +  -+.|
T Consensus        14 TG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~Gkid   91 (270)
T KOG0725|consen   14 TGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGG--LGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKID   91 (270)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCC
Confidence            79999999999999999999999999998763211110000  00002458889999998766555543    2  2699


Q ss_pred             EEEecCCCCccc----------------------HHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCC
Q 023110           75 VVYDINGREADE----------------------VEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        75 ~vi~~a~~~~~~----------------------~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (287)
                      +++|++|.....                      ...+..++    +  +...++++||..-+....         ..+.
T Consensus        92 iLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~---------~~~~  162 (270)
T KOG0725|consen   92 ILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGP---------GSGV  162 (270)
T ss_pred             EEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC---------CCcc
Confidence            999999874311                      11122222    2  345788888866432211         1112


Q ss_pred             cchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcC--CCccCCCCCCceeeeeeHHHHHH
Q 023110          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG--RPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      .|..+|...+.+.+       ..++++..+-||.+..+.....+.........+.  .....+     .-.+...+|++.
T Consensus       163 ~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p-----~gr~g~~~eva~  237 (270)
T KOG0725|consen  163 AYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVP-----LGRVGTPEEVAE  237 (270)
T ss_pred             cchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccc-----cCCccCHHHHHH
Confidence            24489998887764       4689999999999988741111111101111111  001111     113455899999


Q ss_pred             HHHHHHcCCc--cCCceEEecCCcc
Q 023110          198 AFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      ++..+.....  ..|+.+.+.++..
T Consensus       238 ~~~fla~~~asyitG~~i~vdgG~~  262 (270)
T KOG0725|consen  238 AAAFLASDDASYITGQTIIVDGGFT  262 (270)
T ss_pred             hHHhhcCcccccccCCEEEEeCCEE
Confidence            9888876642  3566666666543

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.76  E-value=6.7e-08  Score=77.78  Aligned_cols=173  Identities=13%  Similarity=0.143  Sum_probs=115.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++.+|+.++.++.++|.++...+.+.....+..+.     ..+ ...+..+.+|+++.+++....++.     .+|+
T Consensus        44 TGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~-----~~~-~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~I  117 (300)
T KOG1201|consen   44 TGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKE-----IRK-IGEAKAYTCDISDREEIYRLAKKVKKEVGDVDI  117 (300)
T ss_pred             eCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHH-----HHh-cCceeEEEecCCCHHHHHHHHHHHHHhcCCceE
Confidence            79999999999999999999999999887764332221     110 136889999999998887665532     7999


Q ss_pred             EEecCCCCc--------------------c----cHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------D----EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~----~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .    .+++++..+.  +..++|.++|..-+-...          .-..|.
T Consensus       118 LVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~----------gl~~Yc  187 (300)
T KOG1201|consen  118 LVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPA----------GLADYC  187 (300)
T ss_pred             EEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCc----------cchhhh
Confidence            999999831                    1    1445555544  667999999876532211          122244


Q ss_pred             hhhHHHHHHh-------h---hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          130 KGKLNTESVL-------E---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       130 ~~k~~~E~~~-------~---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      .+|..+.-+.       +   ..+++.+.+.|+.+=..     ++        .+ ..    .....++.+..+.+|+-+
T Consensus       188 aSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg-----mf--------~~-~~----~~~~l~P~L~p~~va~~I  249 (300)
T KOG1201|consen  188 ASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG-----MF--------DG-AT----PFPTLAPLLEPEYVAKRI  249 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc-----cc--------CC-CC----CCccccCCCCHHHHHHHH
Confidence            7787664332       1   24688898888766311     11        11 11    112346778899999999


Q ss_pred             HHHHcCCc
Q 023110          200 VQVLGNEK  207 (287)
Q Consensus       200 ~~~~~~~~  207 (287)
                      +..+..++
T Consensus       250 v~ai~~n~  257 (300)
T KOG1201|consen  250 VEAILTNQ  257 (300)
T ss_pred             HHHHHcCC
Confidence            99987765

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=98.73  E-value=8.9e-07  Score=73.78  Aligned_cols=200  Identities=8%  Similarity=-0.058  Sum_probs=110.7

Q ss_pred             CCc--ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChh---hhhhh-----cCCeEEEEecC--CChH------
Q 023110            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQ---EFAEF-----SSKILHLKGDR--KDYD------   62 (287)
Q Consensus         1 tGa--tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~-----~~~~~~i~~D~--~d~~------   62 (287)
                      |||  +.-||.++++.|.++|.+|++ .|+..............   .....     ......+.+|+  .+++      
T Consensus        15 TGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   93 (303)
T PLN02730         15 AGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPEDV   93 (303)
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCchhh
Confidence            789  799999999999999999988 66544321110000000   00000     11245678888  3222      


Q ss_pred             ------------HHHhhhhc-----CCccEEEecCCCCc----------------------cc----HHHHHHhCCCCcc
Q 023110           63 ------------FVKSSLSA-----KGFDVVYDINGREA----------------------DE----VEPILDALPNLEQ   99 (287)
Q Consensus        63 ------------~~~~~~~~-----~~~d~vi~~a~~~~----------------------~~----~~~ll~~~~~~~~   99 (287)
                                  ++.++++.     -++|++||+||...                      .+    ++.++..+....+
T Consensus        94 ~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~  173 (303)
T PLN02730         94 KTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGA  173 (303)
T ss_pred             hcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCE
Confidence                        55555543     25899999996421                      01    2233344432268


Q ss_pred             EEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhh-------h-CCCcEEEEecCeeecCCCCC-ChhHHHHHH
Q 023110          100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYN-PVEEWFFHR  170 (287)
Q Consensus       100 ~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~-------~-~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~  170 (287)
                      +|++||.......         +.....|..+|...+.+.+       . .++++..|-||.+-.+.... .........
T Consensus       174 II~isS~a~~~~~---------p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~  244 (303)
T PLN02730        174 SISLTYIASERII---------PGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIEY  244 (303)
T ss_pred             EEEEechhhcCCC---------CCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHHHH
Confidence            9999986542110         0000124489998887652       2 47899999999887653211 000111111


Q ss_pred             HHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC--ccCCceEEecCCc
Q 023110          171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      ....  .+.       ..+...+|++.+++.++...  ...|+.+.+.++.
T Consensus       245 ~~~~--~pl-------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~  286 (303)
T PLN02730        245 SYAN--APL-------QKELTADEVGNAAAFLASPLASAITGATIYVDNGL  286 (303)
T ss_pred             HHhc--CCC-------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence            1111  111       12356899999999998643  2356677776653

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.72  E-value=8.6e-08  Score=73.94  Aligned_cols=140  Identities=21%  Similarity=0.228  Sum_probs=86.8

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|-+|..+++.|.+++ .+|+.+.|+.....+..  .....+......+.++.+|+.|++++.++++..     .++
T Consensus         6 tGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~--~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~   83 (181)
T PF08659_consen    6 TGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAE--AAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGPID   83 (181)
T ss_dssp             ETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHH--HHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EE
T ss_pred             ECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHH--HHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCCcc
Confidence            6999999999999999996 48999999832111100  001122222457899999999999999998753     578


Q ss_pred             EEEecCCCC--------------------cccHHHHHHhCC--CCccEEEEeccee-eccCCCCCCCCCCCCCCCcchhh
Q 023110           75 VVYDINGRE--------------------ADEVEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRHKG  131 (287)
Q Consensus        75 ~vi~~a~~~--------------------~~~~~~ll~~~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~~~~~  131 (287)
                      .|||+++..                    +.++.++.+++.  ..+.||.+||... +|...           ...|...
T Consensus        84 gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~g-----------q~~YaaA  152 (181)
T PF08659_consen   84 GVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPG-----------QSAYAAA  152 (181)
T ss_dssp             EEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TT-----------BHHHHHH
T ss_pred             eeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcc-----------hHhHHHH
Confidence            899999873                    223566777765  7889999999764 44321           1223344


Q ss_pred             hHHHHHHh---hhCCCcEEEEecCe
Q 023110          132 KLNTESVL---ESKGVNWTSLRPVY  153 (287)
Q Consensus       132 k~~~E~~~---~~~~~~~~ilR~~~  153 (287)
                      -...+.+.   +..+.+++.|..+.
T Consensus       153 N~~lda~a~~~~~~g~~~~sI~wg~  177 (181)
T PF08659_consen  153 NAFLDALARQRRSRGLPAVSINWGA  177 (181)
T ss_dssp             HHHHHHHHHHHHHTTSEEEEEEE-E
T ss_pred             HHHHHHHHHHHHhCCCCEEEEEccc
Confidence            55555444   45678888887654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.71  E-value=2.9e-08  Score=75.12  Aligned_cols=137  Identities=19%  Similarity=0.202  Sum_probs=93.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+..||..|++++++.|-+|++..|+.....+....         ...+..+.+|+.|.++.+++++.     ...++
T Consensus        11 TGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~---------~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv   81 (245)
T COG3967          11 TGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE---------NPEIHTEVCDVADRDSRRELVEWLKKEYPNLNV   81 (245)
T ss_pred             eCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc---------CcchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence            79999999999999999999999999998875433321         35788899999998766655442     37899


Q ss_pred             EEecCCCCc----------------------cc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           76 VYDINGREA----------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~----------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      +||+||.-.                      .+    +..++..+.  ....+|.+||.-.|-+....|           
T Consensus        82 liNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~P-----------  150 (245)
T COG3967          82 LINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTP-----------  150 (245)
T ss_pred             eeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccc-----------
Confidence            999999721                      11    222333322  456899999976653322222           


Q ss_pred             ch-hhhHHHH-------HHhhhCCCcEEEEecCeeecC
Q 023110          128 RH-KGKLNTE-------SVLESKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       128 ~~-~~k~~~E-------~~~~~~~~~~~ilR~~~v~g~  157 (287)
                      .| .+|...-       .-++..+++++-+-|+.|-.+
T Consensus       151 vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         151 VYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             cchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            23 4454332       223566899999999988654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.69  E-value=5e-08  Score=74.17  Aligned_cols=124  Identities=19%  Similarity=0.182  Sum_probs=83.1

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcC--CccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CC
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRG--KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~   72 (287)
                      |||+|-||++++++|+++ ++.|++++|+  .+...+..     ..+.....++.++++|+.++++++.+++.     ..
T Consensus         6 tGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    6 TGASSGIGRALARALARRGARVVILTSRSEDSEGAQELI-----QELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             ETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHH-----HHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             ECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccc-----cccccccccccccccccccccccccccccccccccc
Confidence            699999999999999999 5688888888  22211110     11122246789999999999888887764     27


Q ss_pred             ccEEEecCCCCccc--------------------HHHHHHhC--CCCccEEEEecceeeccCCCCCCCCCCCCCCCcch-
Q 023110           73 FDVVYDINGREADE--------------------VEPILDAL--PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        73 ~d~vi~~a~~~~~~--------------------~~~ll~~~--~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (287)
                      +|++||++|.....                    ...+.+++  ++..++|++||....-+           ......| 
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~~~Y~  149 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRG-----------SPGMSAYS  149 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSS-----------STTBHHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccC-----------CCCChhHH
Confidence            99999999985311                    11122222  26679999999775321           1122234 


Q ss_pred             hhhHHHHHHhh
Q 023110          130 KGKLNTESVLE  140 (287)
Q Consensus       130 ~~k~~~E~~~~  140 (287)
                      .+|...+.+.+
T Consensus       150 askaal~~~~~  160 (167)
T PF00106_consen  150 ASKAALRGLTQ  160 (167)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            88988887764

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.64  E-value=1.9e-07  Score=71.15  Aligned_cols=134  Identities=16%  Similarity=0.074  Sum_probs=93.1

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC------CccE
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFDV   75 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~------~~d~   75 (287)
                      +++|.||.+|++.+.+.|+.|++..|+.+.- ..+..         ..++.....|+++++.+.....+.      ..|+
T Consensus        15 cs~GGIG~ala~ef~~~G~~V~AtaR~~e~M-~~L~~---------~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~   84 (289)
T KOG1209|consen   15 CSSGGIGYALAKEFARNGYLVYATARRLEPM-AQLAI---------QFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL   84 (289)
T ss_pred             cCCcchhHHHHHHHHhCCeEEEEEccccchH-hhHHH---------hhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence            5789999999999999999999999997762 22221         246888999999998887765432      5799


Q ss_pred             EEecCCCC--------------------cccHHHHHHhCC-----CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-
Q 023110           76 VYDINGRE--------------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~--------------------~~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (287)
                      ++|+||..                    +-+..++.+++.     ....+|++.|...|-..+.           .+.| 
T Consensus        85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf-----------~~iYs  153 (289)
T KOG1209|consen   85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPF-----------GSIYS  153 (289)
T ss_pred             EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccch-----------hhhhh
Confidence            99999873                    223333333322     4458999999887642221           1234 


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeec
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYG  156 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g  156 (287)
                      .+|...-.+.+       -.|++++.+-+|.|-.
T Consensus       154 AsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T  187 (289)
T KOG1209|consen  154 ASKAAIHAYARTLRLELKPFGVRVINAITGGVAT  187 (289)
T ss_pred             HHHHHHHHhhhhcEEeeeccccEEEEecccceec
Confidence            78887665543       3577888888877643

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=98.60  E-value=1.4e-06  Score=70.65  Aligned_cols=136  Identities=20%  Similarity=0.186  Sum_probs=96.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhh-------cCCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-------AKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~~~   73 (287)
                      ||+-.-.|+.|+++|.++|+.|.+-...++. .+.+.....      .+....++.|++++++++++.+       +.+.
T Consensus        35 TGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~g-ae~L~~~~~------s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL  107 (322)
T KOG1610|consen   35 TGCDSGFGRLLAKKLDKKGFRVFAGCLTEEG-AESLRGETK------SPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL  107 (322)
T ss_pred             ecCCcHHHHHHHHHHHhcCCEEEEEeecCch-HHHHhhhhc------CCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence            6888889999999999999999999966655 233322111      3677888999999998887764       2356


Q ss_pred             cEEEecCCCC---------------------ccc----HHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           74 DVVYDINGRE---------------------ADE----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~---------------------~~~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      =.|||+||..                     ..+    +..++..++ ...|+|++||..-  +         .+.+..+
T Consensus       108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G--R---------~~~p~~g  176 (322)
T KOG1610|consen  108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG--R---------VALPALG  176 (322)
T ss_pred             eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc--C---------ccCcccc
Confidence            6899999963                     112    444555555 4469999999653  1         1222233


Q ss_pred             ch-hhhHHHHHHh-------hhCCCcEEEEecCee
Q 023110          128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYI  154 (287)
Q Consensus       128 ~~-~~k~~~E~~~-------~~~~~~~~ilR~~~v  154 (287)
                      +| .||..+|.+.       +..|+++.++-||.+
T Consensus       177 ~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f  211 (322)
T KOG1610|consen  177 PYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFF  211 (322)
T ss_pred             cchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcc
Confidence            45 9999999765       357999999999944

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.57  E-value=8.4e-08  Score=73.34  Aligned_cols=98  Identities=17%  Similarity=0.230  Sum_probs=70.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||||++|. +++.|.++|++|++++|++........     .+.. ...+.++.+|+.|.+++..+++..     .+|.
T Consensus         6 tGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~-----~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~   78 (177)
T PRK08309          6 IGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKR-----ESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDL   78 (177)
T ss_pred             ECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHH-----Hhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence            699998876 999999999999999998654221110     0000 246788999999999888877632     5778


Q ss_pred             EEecCCCCcccHHHHHHhCC--CCc----cEEEEecce
Q 023110           76 VYDINGREADEVEPILDALP--NLE----QFIYCSSAG  107 (287)
Q Consensus        76 vi~~a~~~~~~~~~ll~~~~--~~~----~~i~~Ss~~  107 (287)
                      +|+...  .....++..+|+  +++    +|+++=+..
T Consensus        79 lv~~vh--~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~  114 (177)
T PRK08309         79 AVAWIH--SSAKDALSVVCRELDGSSETYRLFHVLGSA  114 (177)
T ss_pred             EEEecc--ccchhhHHHHHHHHccCCCCceEEEEeCCc
Confidence            887654  557888888887  777    788775433

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.51  E-value=2.1e-06  Score=69.55  Aligned_cols=185  Identities=18%  Similarity=0.160  Sum_probs=114.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      ||++.-+|..++..+..+|..|.++.|+..+..+..+.+...   .....+.+..+|+.|.+++...++..     -+|.
T Consensus        39 tggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~---~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~  115 (331)
T KOG1210|consen   39 TGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELL---TQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDN  115 (331)
T ss_pred             ecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhh---hccceeeEeccccccHHHHHHHHhhhhhccCCcce
Confidence            699999999999999999999999999988754333322211   11234779999999999998888865     5899


Q ss_pred             EEecCCCCcc--------------------cHHHHH----HhCC---CCccEEEEeccee-eccCCCCCCCCCCCCCCCc
Q 023110           76 VYDINGREAD--------------------EVEPIL----DALP---NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~ll----~~~~---~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~  127 (287)
                      +|||||..+.                    ++.+++    .+++   ...+++.+||... ++-....      ...|. 
T Consensus       116 l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~Gys------aYs~s-  188 (331)
T KOG1210|consen  116 LFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYS------AYSPS-  188 (331)
T ss_pred             EEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCccccc------ccccH-
Confidence            9999998432                    233433    3344   2237888887643 2211110      00010 


Q ss_pred             chhhhHHHHHH---hhhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCC--ccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          128 RHKGKLNTESV---LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP--IPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       128 ~~~~k~~~E~~---~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+..|..++.+   +..+++.++..-|+.+..|+-...         ...+|  ..+...   .-+.+..+++|.+++.-
T Consensus       189 K~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E---------n~tkP~~t~ii~g---~ss~~~~e~~a~~~~~~  256 (331)
T KOG1210|consen  189 KFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERE---------NKTKPEETKIIEG---GSSVIKCEEMAKAIVKG  256 (331)
T ss_pred             HHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccc---------cccCchheeeecC---CCCCcCHHHHHHHHHhH
Confidence            12233333332   235688899999998888751100         00111  111111   12447789999999988


Q ss_pred             HcCCc
Q 023110          203 LGNEK  207 (287)
Q Consensus       203 ~~~~~  207 (287)
                      +.+++
T Consensus       257 ~~rg~  261 (331)
T KOG1210|consen  257 MKRGN  261 (331)
T ss_pred             HhhcC
Confidence            87654

>PRK09620 hypothetical protein; Provisional

Probab=98.42  E-value=6.4e-07  Score=71.28  Aligned_cols=72  Identities=17%  Similarity=0.164  Sum_probs=49.2

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      +|||+|++|+++|+++|++|+.+++........+..         ...+..+.++....+.+.++++..++|+|||+|++
T Consensus        27 SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~---------~~~~~~V~s~~d~~~~l~~~~~~~~~D~VIH~AAv   97 (229)
T PRK09620         27 AKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINN---------QLELHPFEGIIDLQDKMKSIITHEKVDAVIMAAAG   97 (229)
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCC---------ceeEEEEecHHHHHHHHHHHhcccCCCEEEECccc
Confidence            589999999999999999999998653321111110         11233455533334577777865589999999987


Q ss_pred             C
Q 023110           83 E   83 (287)
Q Consensus        83 ~   83 (287)
                      .
T Consensus        98 s   98 (229)
T PRK09620         98 S   98 (229)
T ss_pred             c
Confidence            4

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.42  E-value=2.5e-06  Score=69.18  Aligned_cols=142  Identities=19%  Similarity=0.150  Sum_probs=91.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChH----HHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD----FVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~----~~~~~~~~~~~d~v   76 (287)
                      ||||..||++.+++|.++|++|+.++|++++....-++    ..+..+-++.++..|+.+++    .+.+.+...++-++
T Consensus        55 TGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kE----I~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgIL  130 (312)
T KOG1014|consen   55 TGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKE----IEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGIL  130 (312)
T ss_pred             ECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----HHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEEE
Confidence            79999999999999999999999999999884322111    11112346788999997655    46666665667789


Q ss_pred             EecCCCCccc--------------------------HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           77 YDINGREADE--------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        77 i~~a~~~~~~--------------------------~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      ||++|...+.                          ++.++.-+.  +..-++++||..-.-           +.+-...
T Consensus       131 VNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~-----------p~p~~s~  199 (312)
T KOG1014|consen  131 VNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLI-----------PTPLLSV  199 (312)
T ss_pred             EecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccc-----------cChhHHH
Confidence            9998873211                          222333322  445677888755311           1111223


Q ss_pred             h-hhhHHHHHHh-------hhCCCcEEEEecCeeecC
Q 023110          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       129 ~-~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~  157 (287)
                      | .+|...+.+.       +..|+.+-.+-|..|-++
T Consensus       200 ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTk  236 (312)
T KOG1014|consen  200 YSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATK  236 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecc
Confidence            4 7777666543       345777777778777665

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.36  E-value=4.7e-06  Score=61.65  Aligned_cols=190  Identities=16%  Similarity=0.195  Sum_probs=114.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      ||+.-.||+.++.+|.+.|.+|+++.|++....+..++        -..-++.+++|+.+.+.+.+.+... -.|.++|.
T Consensus        13 TgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e--------~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNN   84 (245)
T KOG1207|consen   13 TGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKE--------TPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNN   84 (245)
T ss_pred             ecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhh--------CCcceeeeEecccHHHHHHHhhcccCchhhhhcc
Confidence            67777899999999999999999999998875433321        1234889999999988888877643 47888898


Q ss_pred             CCCCc--------------------ccHH--------HHHHhCCCCccEEEEecceeeccCCCCCCCCCCCCCCCcch-h
Q 023110           80 NGREA--------------------DEVE--------PILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        80 a~~~~--------------------~~~~--------~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (287)
                      ||+..                    .+..        ++++.. ....++.+||.+.--           +..-..-| .
T Consensus        85 AgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~-~~GaIVNvSSqas~R-----------~~~nHtvYca  152 (245)
T KOG1207|consen   85 AGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQ-IKGAIVNVSSQASIR-----------PLDNHTVYCA  152 (245)
T ss_pred             chhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhcc-CCceEEEecchhccc-----------ccCCceEEee
Confidence            88732                    1111        122221 123488899876421           11111234 5


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      +|....-+-+       -..+++..+.|..|+..-.... .-+.--...++..++         --|.-++.++.++..+
T Consensus       153 tKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl---------~rFaEV~eVVnA~lfL  223 (245)
T KOG1207|consen  153 TKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPL---------KRFAEVDEVVNAVLFL  223 (245)
T ss_pred             cHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCch---------hhhhHHHHHHhhheee
Confidence            6665543221       2457788888888875422111 111111111221121         2356688899999888


Q ss_pred             HcCCc--cCCceEEecCCc
Q 023110          203 LGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~  219 (287)
                      +....  ..|....+.++.
T Consensus       224 LSd~ssmttGstlpveGGf  242 (245)
T KOG1207|consen  224 LSDNSSMTTGSTLPVEGGF  242 (245)
T ss_pred             eecCcCcccCceeeecCCc
Confidence            86543  255566665554

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.31  E-value=7.8e-06  Score=63.21  Aligned_cols=178  Identities=16%  Similarity=0.177  Sum_probs=107.7

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEE-cCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-------C
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-------~   71 (287)
                      |||+-.||-.|+++|++. |.++++.. |+++...+.+.     .+..-..++++++.|+++.+++..+.++       .
T Consensus         9 tGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~-----~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    9 TGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELA-----LKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             eccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHH-----HhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            799999999999999986 66666555 44555322221     1111157899999999988777766653       3


Q ss_pred             CccEEEecCCCCcc-------------------------cHHHHHHhCC-------------CCccEEEEecceeeccCC
Q 023110           72 GFDVVYDINGREAD-------------------------EVEPILDALP-------------NLEQFIYCSSAGVYLKSD  113 (287)
Q Consensus        72 ~~d~vi~~a~~~~~-------------------------~~~~ll~~~~-------------~~~~~i~~Ss~~v~~~~~  113 (287)
                      +.++++++||....                         .++.++..++             +...+|++||.+.-    
T Consensus        84 GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s----  159 (249)
T KOG1611|consen   84 GLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS----  159 (249)
T ss_pred             CceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc----
Confidence            78999999997311                         1222222222             12368889886642    


Q ss_pred             CCCCCCCCCCCCC-cchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCc
Q 023110          114 LLPHCETDTVDPK-SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (287)
Q Consensus       114 ~~~~~e~~~~~~~-~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (287)
                          .......+. .|..+|.+.-.+.+       ..++-++.+.||+|-..-              .+           
T Consensus       160 ----~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDM--------------gg-----------  210 (249)
T KOG1611|consen  160 ----IGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDM--------------GG-----------  210 (249)
T ss_pred             ----cCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCC--------------CC-----------
Confidence                111122222 23388887655443       456778889999884431              11           


Q ss_pred             eeeeeeHHHHHHHHHHHHcC--CccCCceEEec
Q 023110          186 VTQLGHVKDLARAFVQVLGN--EKASRQVFNIS  216 (287)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~--~~~~~~~~~i~  216 (287)
                      .-..+.+++-+..++..+.+  +..+|..||-.
T Consensus       211 ~~a~ltveeSts~l~~~i~kL~~~hnG~ffn~d  243 (249)
T KOG1611|consen  211 KKAALTVEESTSKLLASINKLKNEHNGGFFNRD  243 (249)
T ss_pred             CCcccchhhhHHHHHHHHHhcCcccCcceEccC
Confidence            11345577777777777765  33466655543

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.29  E-value=0.00023  Score=59.37  Aligned_cols=201  Identities=7%  Similarity=-0.037  Sum_probs=103.7

Q ss_pred             CCcc--cchHHHHHHHHHHcCCeEEEEEcCCc-------cccccCC---CCChhh---------hhhhcCCeEEEEecCC
Q 023110            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKA-------PIAQQLP---GESDQE---------FAEFSSKILHLKGDRK   59 (287)
Q Consensus         1 tGat--G~iG~~l~~~l~~~g~~V~~~~r~~~-------~~~~~~~---~~~~~~---------~~~~~~~~~~i~~D~~   59 (287)
                      |||+  .-||+++++.|.++|++|++.+|.+.       .......   ......         +..-....+-+..|+.
T Consensus        14 TGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~v~~~i~   93 (299)
T PRK06300         14 AGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPEDVPEEIR   93 (299)
T ss_pred             eCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEEeecccC
Confidence            6884  89999999999999999999775420       0000000   000000         0000012222333332


Q ss_pred             C--------hHHHHhhhh----cC-CccEEEecCCCCc---c-------------------c----HHHHHHhCCCCccE
Q 023110           60 D--------YDFVKSSLS----AK-GFDVVYDINGREA---D-------------------E----VEPILDALPNLEQF  100 (287)
Q Consensus        60 d--------~~~~~~~~~----~~-~~d~vi~~a~~~~---~-------------------~----~~~ll~~~~~~~~~  100 (287)
                      +        .+++.++++    .. ++|++||++|...   .                   +    ++.++..++...++
T Consensus        94 ~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~i  173 (299)
T PRK06300         94 ENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGST  173 (299)
T ss_pred             ccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeE
Confidence            2        112444333    22 6999999986521   0                   1    22233444433578


Q ss_pred             EEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhh-------h-CCCcEEEEecCeeecCCCCC-ChhHHHHHHH
Q 023110          101 IYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRL  171 (287)
Q Consensus       101 i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~-------~-~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~  171 (287)
                      |++||....-..         +.....|..+|...+.+.+       . .|+++..|.||.+-.+.... ..........
T Consensus       174 i~iss~~~~~~~---------p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~  244 (299)
T PRK06300        174 ISLTYLASMRAV---------PGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVDYY  244 (299)
T ss_pred             EEEeehhhcCcC---------CCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHHHH
Confidence            888875432110         0000124488988876552       2 38999999999886653110 0001111111


Q ss_pred             HcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC--ccCCceEEecCCc
Q 023110          172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      ...  .+.       ......+|++.++..++...  ...|+.+.+.++.
T Consensus       245 ~~~--~p~-------~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  285 (299)
T PRK06300        245 QDW--APL-------PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGA  285 (299)
T ss_pred             Hhc--CCC-------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            111  111       12346899999999988643  2367777777653

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.28  E-value=1.2e-05  Score=65.41  Aligned_cols=143  Identities=19%  Similarity=0.227  Sum_probs=89.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccc-cccCCCCChhhhhhhc-CCeEEEEecCCC-hHHHHhhhhcC-----C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFS-SKILHLKGDRKD-YDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~-~~~~~i~~D~~d-~~~~~~~~~~~-----~   72 (287)
                      |||++.+|.++++.|.++|++|+++.|+.... .+.....    ..... ..+.+..+|+.+ .+++..+++..     +
T Consensus        11 TGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~   86 (251)
T COG1028          11 TGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAA----IKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFGR   86 (251)
T ss_pred             eCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHH----HHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            79999999999999999999999988886541 1111000    00000 357788899998 77776665431     4


Q ss_pred             ccEEEecCCCCcc---------------------cHHHHHHhCC-CCc--cEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           73 FDVVYDINGREAD---------------------EVEPILDALP-NLE--QFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        73 ~d~vi~~a~~~~~---------------------~~~~ll~~~~-~~~--~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +|+++|+||....                     +...+.+++. ..+  ++|++||.... .....         ...|
T Consensus        87 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~---------~~~Y  156 (251)
T COG1028          87 IDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG---------QAAY  156 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC---------cchH
Confidence            8999999997321                     1111222211 122  99999997653 21110         1224


Q ss_pred             hhhhHHHHHHh-------hhCCCcEEEEecCeeecC
Q 023110          129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       129 ~~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~  157 (287)
                      ..+|...+.+.       ...|+.+..+-||.+-.+
T Consensus       157 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~  192 (251)
T COG1028         157 AASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP  192 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence            48888876554       235789999999955433

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.26  E-value=9.7e-06  Score=83.97  Aligned_cols=146  Identities=16%  Similarity=0.036  Sum_probs=95.6

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccc-----cc-----------------------------cCCCC---C--
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPI-----AQ-----------------------------QLPGE---S--   40 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~-----~~-----------------------------~~~~~---~--   40 (287)
                      |||++.||..+++.|.++ |.+|++++|+....     ..                             .....   .  
T Consensus      2003 TGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~~~~ei 2082 (2582)
T TIGR02813      2003 TGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVLSSLEI 2082 (2582)
T ss_pred             eCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccchhHHH
Confidence            799999999999999998 69999999983100     00                             00000   0  


Q ss_pred             ---hhhhhhhcCCeEEEEecCCChHHHHhhhhcC----CccEEEecCCCC--------------------cccHHHHHHh
Q 023110           41 ---DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVVYDINGRE--------------------ADEVEPILDA   93 (287)
Q Consensus        41 ---~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~----~~d~vi~~a~~~--------------------~~~~~~ll~~   93 (287)
                         ...+......+.++.+|++|.+++.++++..    ++|.|||+||..                    +.++.+++++
T Consensus      2083 ~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~a 2162 (2582)
T TIGR02813      2083 AQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAA 2162 (2582)
T ss_pred             HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence               0011122346889999999999888777642    589999999973                    3345667777


Q ss_pred             CC--CCccEEEEeccee-eccCCCCCCCCCCCCCCCcchhhhHHHHHHhh-----hCCCcEEEEecCeeecC
Q 023110           94 LP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-----SKGVNWTSLRPVYIYGP  157 (287)
Q Consensus        94 ~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~-----~~~~~~~ilR~~~v~g~  157 (287)
                      +.  ..+++|++||... +|...           ...|..+|.....+.+     ..++++..+.+|.+-++
T Consensus      2163 l~~~~~~~IV~~SSvag~~G~~g-----------qs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813      2163 LNAENIKLLALFSSAAGFYGNTG-----------QSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred             HHHhCCCeEEEEechhhcCCCCC-----------cHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence            65  4578999999764 33211           1124477766654432     23578888888877554

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK06720 hypothetical protein; Provisional

Probab=98.25  E-value=2.8e-06  Score=64.55  Aligned_cols=77  Identities=19%  Similarity=0.240  Sum_probs=56.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||.++++.|.+.|++|++.+|+.+......     ..+........++.+|+.+.+++.++++.     .++|+
T Consensus        22 TGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDi   96 (169)
T PRK06720         22 TGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATV-----EEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDM   96 (169)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999998865421110     01111123567889999998888776542     26999


Q ss_pred             EEecCCC
Q 023110           76 VYDINGR   82 (287)
Q Consensus        76 vi~~a~~   82 (287)
                      +||++|.
T Consensus        97 lVnnAG~  103 (169)
T PRK06720         97 LFQNAGL  103 (169)
T ss_pred             EEECCCc
Confidence            9999984

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.23  E-value=7.1e-07  Score=73.20  Aligned_cols=92  Identities=18%  Similarity=0.244  Sum_probs=67.8

Q ss_pred             CCcccchHHHHHHHHHH----cCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVK----EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      .|||||.|..+++.+++    .+...-+..|+..+..+.+++.....-..+...+ ++.+|..|++++.+..+  ++.+|
T Consensus        11 yGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak--~~~vi   87 (423)
T KOG2733|consen   11 YGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAK--QARVI   87 (423)
T ss_pred             EccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHh--hhEEE
Confidence            49999999999999999    6788888999988754444322211111112334 89999999999999999  99999


Q ss_pred             EecCCCCcccHHHHHHhCC
Q 023110           77 YDINGREADEVEPILDALP   95 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~   95 (287)
                      +||+|+-...-++++.+|-
T Consensus        88 vN~vGPyR~hGE~VVkaci  106 (423)
T KOG2733|consen   88 VNCVGPYRFHGEPVVKACI  106 (423)
T ss_pred             EeccccceecCcHHHHHHH
Confidence            9999986555555555543

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.22  E-value=4.6e-06  Score=66.63  Aligned_cols=68  Identities=19%  Similarity=0.270  Sum_probs=48.5

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC--hHHHHhhhhcCCccEEEec
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d--~~~~~~~~~~~~~d~vi~~   79 (287)
                      .+||++|++|+++|+++|++|++++|.....  ...          ..+++++.++..+  .+.+.+.++  ++|+|||+
T Consensus        23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--~~~----------~~~v~~i~v~s~~~m~~~l~~~~~--~~DivIh~   88 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--PEP----------HPNLSIIEIENVDDLLETLEPLVK--DHDVLIHS   88 (229)
T ss_pred             ccchHHHHHHHHHHHhCCCEEEEEECccccc--CCC----------CCCeEEEEEecHHHHHHHHHHHhc--CCCEEEeC
Confidence            4799999999999999999999999764321  100          1356666654322  244556666  79999999


Q ss_pred             CCCC
Q 023110           80 NGRE   83 (287)
Q Consensus        80 a~~~   83 (287)
                      ||..
T Consensus        89 AAvs   92 (229)
T PRK06732         89 MAVS   92 (229)
T ss_pred             CccC
Confidence            9974

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.13  E-value=5.9e-06  Score=70.15  Aligned_cols=90  Identities=24%  Similarity=0.276  Sum_probs=68.4

Q ss_pred             cccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |+|+||+.++..|.++| ++|++.+|+..+..+....        ...+++.++.|..|.+.+.++++  +.|+||+++.
T Consensus         8 GaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~--------~~~~v~~~~vD~~d~~al~~li~--~~d~VIn~~p   77 (389)
T COG1748           8 GAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAEL--------IGGKVEALQVDAADVDALVALIK--DFDLVINAAP   77 (389)
T ss_pred             CCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhh--------ccccceeEEecccChHHHHHHHh--cCCEEEEeCC
Confidence            44999999999999998 9999999998774322211        02479999999999999999999  7899999997


Q ss_pred             CCcccHHHHHHhCC-CCccEEEEe
Q 023110           82 READEVEPILDALP-NLEQFIYCS  104 (287)
Q Consensus        82 ~~~~~~~~ll~~~~-~~~~~i~~S  104 (287)
                      ....  .+++++|- ...+++-+|
T Consensus        78 ~~~~--~~i~ka~i~~gv~yvDts   99 (389)
T COG1748          78 PFVD--LTILKACIKTGVDYVDTS   99 (389)
T ss_pred             chhh--HHHHHHHHHhCCCEEEcc
Confidence            6443  36666654 334555444

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.09  E-value=3e-05  Score=57.29  Aligned_cols=188  Identities=19%  Similarity=0.238  Sum_probs=114.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      ||+..-+|++.++.|.++|..|..++...++-.+.-        .++..++.|...|++...+++.++...     +.|+
T Consensus        15 tggasglg~ataerlakqgasv~lldlp~skg~~va--------kelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen   15 TGGASGLGKATAERLAKQGASVALLDLPQSKGADVA--------KELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             ecCcccccHHHHHHHHhcCceEEEEeCCcccchHHH--------HHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            688888999999999999999999998766522111        222578899999999988888887643     6899


Q ss_pred             EEecCCCCc--------------------------ccHHHHHHhCC----------CCcc--EEEEecceeeccCCCCCC
Q 023110           76 VYDINGREA--------------------------DEVEPILDALP----------NLEQ--FIYCSSAGVYLKSDLLPH  117 (287)
Q Consensus        76 vi~~a~~~~--------------------------~~~~~ll~~~~----------~~~~--~i~~Ss~~v~~~~~~~~~  117 (287)
                      .+||+|...                          .++-|+++...          +..|  +|.+-|...|....++. 
T Consensus        87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqa-  165 (260)
T KOG1199|consen   87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQA-  165 (260)
T ss_pred             eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchh-
Confidence            999998731                          12223222210          1112  34444444443332211 


Q ss_pred             CCCCCCCCCcchhhhHHHH-------HHhhhCCCcEEEEecCeeecCCCCCChhHHHHH---HHHcCCCccCCCCCCcee
Q 023110          118 CETDTVDPKSRHKGKLNTE-------SVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFH---RLKAGRPIPIPGSGIQVT  187 (287)
Q Consensus       118 ~e~~~~~~~~~~~~k~~~E-------~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  187 (287)
                               .|..+|...-       +-+...|++++.+-||.+-.|     ++..+-+   ..+.. .++.+.      
T Consensus       166 ---------aysaskgaivgmtlpiardla~~gir~~tiapglf~tp-----llsslpekv~~fla~-~ipfps------  224 (260)
T KOG1199|consen  166 ---------AYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTP-----LLSSLPEKVKSFLAQ-LIPFPS------  224 (260)
T ss_pred             ---------hhhcccCceEeeechhhhhcccCceEEEeecccccCCh-----hhhhhhHHHHHHHHH-hCCCch------
Confidence                     1223333211       112345788999999876555     2222222   22222 223221      


Q ss_pred             eeeeHHHHHHHHHHHHcCCccCCceEEecCC
Q 023110          188 QLGHVKDLARAFVQVLGNEKASRQVFNISGE  218 (287)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~  218 (287)
                      -.-|..+.+..+-.+++++..+|++..+.+.
T Consensus       225 rlg~p~eyahlvqaiienp~lngevir~dga  255 (260)
T KOG1199|consen  225 RLGHPHEYAHLVQAIIENPYLNGEVIRFDGA  255 (260)
T ss_pred             hcCChHHHHHHHHHHHhCcccCCeEEEecce
Confidence            2345778888888999999888888877663

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.01  E-value=2.4e-05  Score=63.33  Aligned_cols=83  Identities=16%  Similarity=0.159  Sum_probs=64.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||||. |+.|++.|.++|++|++.+++.... +.+.          ..+...+..+..|.+.+.+.+++.++|+||+++
T Consensus         6 lGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~-~~~~----------~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAt   73 (256)
T TIGR00715         6 MGGTVD-SRAIAKGLIAQGIEILVTVTTSEGK-HLYP----------IHQALTVHTGALDPQELREFLKRHSIDILVDAT   73 (256)
T ss_pred             EechHH-HHHHHHHHHhCCCeEEEEEccCCcc-cccc----------ccCCceEEECCCCHHHHHHHHHhcCCCEEEEcC
Confidence            599999 9999999999999999999998752 2222          122334556667888899999988999999998


Q ss_pred             CCCc-ccHHHHHHhCC
Q 023110           81 GREA-DEVEPILDALP   95 (287)
Q Consensus        81 ~~~~-~~~~~ll~~~~   95 (287)
                      .... .-+.++.++|+
T Consensus        74 HPfA~~is~~a~~a~~   89 (256)
T TIGR00715        74 HPFAAQITTNATAVCK   89 (256)
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            7654 44677778877

This enzyme was found to be a monomer by gel filtration.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.01  E-value=7.7e-06  Score=70.96  Aligned_cols=91  Identities=22%  Similarity=0.291  Sum_probs=64.7

Q ss_pred             CCcccchHHHHHHHHHHcC-C-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEG-H-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      +|+ |++|+.+++.|.+++ + +|++.+|+.........+.       ...+++.++.|+.|.+++.++++  ++|+|||
T Consensus         4 lG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~l~~~~~--~~dvVin   73 (386)
T PF03435_consen    4 LGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-------LGDRVEAVQVDVNDPESLAELLR--GCDVVIN   73 (386)
T ss_dssp             E---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---------TTTTEEEEE--TTTHHHHHHHHT--TSSEEEE
T ss_pred             EcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-------cccceeEEEEecCCHHHHHHHHh--cCCEEEE
Confidence            488 999999999999985 4 8999999988743222110       14689999999999999999999  8999999


Q ss_pred             cCCCCcccHHHHHHhCC-CCccEEEE
Q 023110           79 INGREADEVEPILDALP-NLEQFIYC  103 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~-~~~~~i~~  103 (287)
                      |++..  ....++++|- ...++|-+
T Consensus        74 ~~gp~--~~~~v~~~~i~~g~~yvD~   97 (386)
T PF03435_consen   74 CAGPF--FGEPVARACIEAGVHYVDT   97 (386)
T ss_dssp             -SSGG--GHHHHHHHHHHHT-EEEES
T ss_pred             CCccc--hhHHHHHHHHHhCCCeecc
Confidence            99865  5556666655 33455553

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.00  E-value=1.4e-05  Score=66.84  Aligned_cols=148  Identities=20%  Similarity=0.178  Sum_probs=88.2

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      +|++|.||+.++..|..++  ++++.+++.... ...+ ++.       +........+..|+.++.+.++  ++|+||+
T Consensus        14 iGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~-g~a~-Dl~-------~~~~~~~v~~~td~~~~~~~l~--gaDvVVi   82 (321)
T PTZ00325         14 LGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAP-GVAA-DLS-------HIDTPAKVTGYADGELWEKALR--GADLVLI   82 (321)
T ss_pred             ECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCc-cccc-chh-------hcCcCceEEEecCCCchHHHhC--CCCEEEE
Confidence            5888999999999998654  689999993221 1111 110       0111233455566555567777  9999999


Q ss_pred             cCCCCcc--------------cHHHHHHhCC--CCccEEEEecceeeccCCCC--CCCCCCCCCCCcch-hhhHHH---H
Q 023110           79 INGREAD--------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLNT---E  136 (287)
Q Consensus        79 ~a~~~~~--------------~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~--~~~e~~~~~~~~~~-~~k~~~---E  136 (287)
                      ++|....              .+++++++++  +.+++|+++|..+.....-.  ...+...++|...+ .+-+..   .
T Consensus        83 taG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r  162 (321)
T PTZ00325         83 CAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRAR  162 (321)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHH
Confidence            9998422              3566777776  88999999998764422110  11122333333332 221211   1


Q ss_pred             HHh-hhCCCcEEEEecCeeecCCCC
Q 023110          137 SVL-ESKGVNWTSLRPVYIYGPLNY  160 (287)
Q Consensus       137 ~~~-~~~~~~~~ilR~~~v~g~~~~  160 (287)
                      .++ +..++...-++ +.|+|.+..
T Consensus       163 ~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        163 KFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             HHHHHHhCcChhheE-EEEEeecCC
Confidence            122 44577777777 788997654

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.74  E-value=5.7e-05  Score=63.62  Aligned_cols=75  Identities=16%  Similarity=0.078  Sum_probs=47.3

Q ss_pred             CCcccchHHHHHHHHHHcC-------CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCc
Q 023110            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~   73 (287)
                      |||+|++|++++..|+..+       ++|++++++....  .+.....    .+.+.......|+....++.+.++  ++
T Consensus         8 ~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~--~~~g~~~----Dl~d~~~~~~~~~~~~~~~~~~l~--~a   79 (325)
T cd01336           8 TGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK--ALEGVVM----ELQDCAFPLLKSVVATTDPEEAFK--DV   79 (325)
T ss_pred             ECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc--cccceee----ehhhccccccCCceecCCHHHHhC--CC
Confidence            6999999999999999844       5899999975421  0110000    000001011234444456667787  99


Q ss_pred             cEEEecCCCC
Q 023110           74 DVVYDINGRE   83 (287)
Q Consensus        74 d~vi~~a~~~   83 (287)
                      |+|||+||..
T Consensus        80 DiVI~tAG~~   89 (325)
T cd01336          80 DVAILVGAMP   89 (325)
T ss_pred             CEEEEeCCcC
Confidence            9999999984

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00106 malate dehydrogenase

Probab=97.62  E-value=0.00016  Score=60.68  Aligned_cols=146  Identities=19%  Similarity=0.159  Sum_probs=84.0

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      +|++|.||+.++..|..++  .+++.++.+... ...+ ++.       +........++.+.+++.+.++  ++|+||+
T Consensus        24 iGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~-g~a~-Dl~-------~~~~~~~i~~~~~~~d~~~~l~--~aDiVVi   92 (323)
T PLN00106         24 LGAAGGIGQPLSLLMKMNPLVSELHLYDIANTP-GVAA-DVS-------HINTPAQVRGFLGDDQLGDALK--GADLVII   92 (323)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCC-eeEc-hhh-------hCCcCceEEEEeCCCCHHHHcC--CCCEEEE
Confidence            5889999999999999765  489999987721 1111 100       1111223334444545777888  9999999


Q ss_pred             cCCCCc--------------ccHHHHHHhCC--CCccEEEEecceeeccCCC--CCCCCCCCCCCCcch-hhhHHHHHHh
Q 023110           79 INGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDL--LPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        79 ~a~~~~--------------~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~--~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (287)
                      +||...              ..++++.+.+.  +...+|+++|.-+-+...-  ........++|...+ .+++..+++-
T Consensus        93 tAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~  172 (323)
T PLN00106         93 PAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRAN  172 (323)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHHH
Confidence            999742              23556666665  6778888888655210000  001122233333333 4445444332


Q ss_pred             ----hhCCCcEEEEecCeeecCC
Q 023110          140 ----ESKGVNWTSLRPVYIYGPL  158 (287)
Q Consensus       140 ----~~~~~~~~ilR~~~v~g~~  158 (287)
                          +..+++..-++ +.|+|.+
T Consensus       173 ~~lA~~lgv~~~~V~-~~ViGeH  194 (323)
T PLN00106        173 TFVAEKKGLDPADVD-VPVVGGH  194 (323)
T ss_pred             HHHHHHhCCChhheE-EEEEEeC
Confidence                45577766664 4577765

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.62  E-value=6.7e-05  Score=58.54  Aligned_cols=76  Identities=21%  Similarity=0.223  Sum_probs=55.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|.+|+.+++.|.+.|++|++++|+..... .+.+    .+.. ..+.+....|..+.+++.+.++  ++|+||++.
T Consensus        34 lGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~-~l~~----~l~~-~~~~~~~~~~~~~~~~~~~~~~--~~diVi~at  105 (194)
T cd01078          34 LGGTGPVGQRAAVLLAREGARVVLVGRDLERAQ-KAAD----SLRA-RFGEGVGAVETSDDAARAAAIK--GADVVFAAG  105 (194)
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHH----HHHh-hcCCcEEEeeCCCHHHHHHHHh--cCCEEEECC
Confidence            589999999999999999999999999865422 1110    0000 1234566778888888888898  899999987


Q ss_pred             CCCc
Q 023110           81 GREA   84 (287)
Q Consensus        81 ~~~~   84 (287)
                      +...
T Consensus       106 ~~g~  109 (194)
T cd01078         106 AAGV  109 (194)
T ss_pred             CCCc
Confidence            6443

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.52  E-value=0.00036  Score=55.66  Aligned_cols=89  Identities=25%  Similarity=0.337  Sum_probs=66.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d~vi~~a~   81 (287)
                      |.|.+|+++++.|.++|++|+++++++....+....         ......+.+|-++++.|.++ +.  ++|+++-+.+
T Consensus         7 G~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---------~~~~~~v~gd~t~~~~L~~agi~--~aD~vva~t~   75 (225)
T COG0569           7 GAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---------ELDTHVVIGDATDEDVLEEAGID--DADAVVAATG   75 (225)
T ss_pred             CCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---------hcceEEEEecCCCHHHHHhcCCC--cCCEEEEeeC
Confidence            689999999999999999999999998875432221         14678899999999999988 66  8999998887


Q ss_pred             CCcccHHHHHHhCC--CCccEEE
Q 023110           82 READEVEPILDALP--NLEQFIY  102 (287)
Q Consensus        82 ~~~~~~~~ll~~~~--~~~~~i~  102 (287)
                      .+........-+++  +++++|-
T Consensus        76 ~d~~N~i~~~la~~~~gv~~via   98 (225)
T COG0569          76 NDEVNSVLALLALKEFGVPRVIA   98 (225)
T ss_pred             CCHHHHHHHHHHHHhcCCCcEEE
Confidence            65443332222223  6777763

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=97.49  E-value=4.5e-05  Score=47.16  Aligned_cols=46  Identities=15%  Similarity=0.040  Sum_probs=23.6

Q ss_pred             HHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          229 ACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       229 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      ++.+.+|++. ++...+          .++.+......|+ +|++++|||+|+++|++
T Consensus         1 A~e~vtG~~i-~~~~~~----------rR~GD~~~~~Ad~-~kA~~~LgW~p~~~L~~   46 (62)
T PF13950_consen    1 AFEKVTGKKI-PVEYAP----------RRPGDPAHLVADI-SKAREELGWKPKYSLED   46 (62)
T ss_dssp             HHHHHHTS----EEEE-------------TT--SEE-B---HHHHHHC----SSSHHH
T ss_pred             CcHHHHCCCC-CceECC----------CCCCchhhhhCCH-HHHHHHhCCCcCCCHHH
Confidence            3677888776 333322          1344567888899 99999999999999986

...

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=97.48  E-value=0.0072  Score=47.32  Aligned_cols=188  Identities=13%  Similarity=0.127  Sum_probs=106.6

Q ss_pred             cchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccEEEec
Q 023110            5 RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDVVYDI   79 (287)
Q Consensus         5 G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~vi~~   79 (287)
                      --|+..++++|.++|.++.....++.- .+.++     ++.+......+++||+.+.+++..++++.     +.|.++|+
T Consensus        18 rSIAwGIAk~l~~~GAeL~fTy~~e~l-~krv~-----~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHs   91 (259)
T COG0623          18 RSIAWGIAKALAEQGAELAFTYQGERL-EKRVE-----ELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHS   91 (259)
T ss_pred             ccHHHHHHHHHHHcCCEEEEEeccHHH-HHHHH-----HHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEE
Confidence            468899999999999999888877622 22221     11111234457899999998888888643     79999999


Q ss_pred             CCCCccc------------------------HHHHHHhCC----CCccEE---EEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           80 NGREADE------------------------VEPILDALP----NLEQFI---YCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        80 a~~~~~~------------------------~~~ll~~~~----~~~~~i---~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      .+.....                        ...+.++++    ....+|   |..|..+             . +-++.
T Consensus        92 IaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~-------------v-PnYNv  157 (259)
T COG0623          92 IAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERV-------------V-PNYNV  157 (259)
T ss_pred             eccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceee-------------c-CCCch
Confidence            8874210                        122333322    223333   3333222             1 11122


Q ss_pred             -hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCC-CCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          129 -HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 -~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                       ..+|...|.-++       ..|+++..+-.|-+=.-.. .-..+..++......-++         +..+..+|++...
T Consensus       158 MGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl---------~r~vt~eeVG~tA  228 (259)
T COG0623         158 MGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPL---------RRNVTIEEVGNTA  228 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCc---------cCCCCHHHhhhhH
Confidence             388888886543       2456666555543311000 001123334333322222         2335589999988


Q ss_pred             HHHHcCCc--cCCceEEecCCccc
Q 023110          200 VQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~~  221 (287)
                      +.++..-.  ..|++.++.++..+
T Consensus       229 ~fLlSdLssgiTGei~yVD~G~~i  252 (259)
T COG0623         229 AFLLSDLSSGITGEIIYVDSGYHI  252 (259)
T ss_pred             HHHhcchhcccccceEEEcCCcee
Confidence            88876432  26788888887654

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.46  E-value=0.00017  Score=57.58  Aligned_cols=65  Identities=20%  Similarity=0.286  Sum_probs=45.3

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccEE
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDVV   76 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~v   76 (287)
                      .+||.+|.++++.|.++|++|+++++....     ..         ..   ...+|+.+.++..++++.     .++|++
T Consensus        22 ~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l-----~~---------~~---~~~~Dv~d~~s~~~l~~~v~~~~g~iDiL   84 (227)
T TIGR02114        22 HSTGHLGKIITETFLSAGHEVTLVTTKRAL-----KP---------EP---HPNLSIREIETTKDLLITLKELVQEHDIL   84 (227)
T ss_pred             CcccHHHHHHHHHHHHCCCEEEEEcChhhc-----cc---------cc---CCcceeecHHHHHHHHHHHHHHcCCCCEE
Confidence            368999999999999999999998763211     00         00   134677776666554432     168999


Q ss_pred             EecCCCC
Q 023110           77 YDINGRE   83 (287)
Q Consensus        77 i~~a~~~   83 (287)
                      ||+||..
T Consensus        85 VnnAgv~   91 (227)
T TIGR02114        85 IHSMAVS   91 (227)
T ss_pred             EECCEec
Confidence            9999864

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.44  E-value=0.00033  Score=60.21  Aligned_cols=96  Identities=20%  Similarity=0.246  Sum_probs=61.4

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHh-hhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-SLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~-~~~~~~~d~vi~   78 (287)
                      .||||++|+.|++.|.++ +++|..+.+..+. .+.+..          .......+|..+.+.+.. .++  ++|+||.
T Consensus        44 vGATG~vG~eLlrlL~~hP~~el~~l~s~~sa-G~~i~~----------~~~~l~~~~~~~~~~~~~~~~~--~~DvVf~  110 (381)
T PLN02968         44 LGASGYTGAEVRRLLANHPDFEITVMTADRKA-GQSFGS----------VFPHLITQDLPNLVAVKDADFS--DVDAVFC  110 (381)
T ss_pred             ECCCChHHHHHHHHHHhCCCCeEEEEEChhhc-CCCchh----------hCccccCccccceecCCHHHhc--CCCEEEE
Confidence            499999999999999998 6799999886443 112110          011112233322222221 245  8999999


Q ss_pred             cCCCCcccHHHHHHhCCCCccEEEEecceeecc
Q 023110           79 INGREADEVEPILDALPNLEQFIYCSSAGVYLK  111 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~v~~~  111 (287)
                      +.+  .....+++..+....++|-+|+..-+.+
T Consensus       111 Alp--~~~s~~i~~~~~~g~~VIDlSs~fRl~~  141 (381)
T PLN02968        111 CLP--HGTTQEIIKALPKDLKIVDLSADFRLRD  141 (381)
T ss_pred             cCC--HHHHHHHHHHHhCCCEEEEcCchhccCC
Confidence            875  3466677776664478999999886654

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.44  E-value=9.7e-05  Score=60.49  Aligned_cols=80  Identities=21%  Similarity=0.161  Sum_probs=57.0

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      ||+||.|.-++++|..+|.+-....|+..+....-.          ..+-++-...+.+++.+.+...  +.++|+||+|
T Consensus        13 GAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~----------~LG~~~~~~p~~~p~~~~~~~~--~~~VVlncvG   80 (382)
T COG3268          13 GATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRA----------SLGPEAAVFPLGVPAALEAMAS--RTQVVLNCVG   80 (382)
T ss_pred             ccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHH----------hcCccccccCCCCHHHHHHHHh--cceEEEeccc
Confidence            999999999999999999988888888877421111          1123333445556888999998  9999999999


Q ss_pred             CCcccHHHHHHh
Q 023110           82 READEVEPILDA   93 (287)
Q Consensus        82 ~~~~~~~~ll~~   93 (287)
                      +-......++++
T Consensus        81 Pyt~~g~plv~a   92 (382)
T COG3268          81 PYTRYGEPLVAA   92 (382)
T ss_pred             cccccccHHHHH
Confidence            854433333333

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.40  E-value=0.00054  Score=59.28  Aligned_cols=64  Identities=16%  Similarity=0.098  Sum_probs=49.1

Q ss_pred             ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc--CCccEEEecCC
Q 023110            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVYDING   81 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~~~d~vi~~a~   81 (287)
                      ||.+|.++++.|..+|++|+.++++.+. .  .           ..+  ....|+.+.+++.+.+.+  .++|++||+||
T Consensus       213 SG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~--~-----------~~~--~~~~dv~~~~~~~~~v~~~~~~~DilI~~Aa  276 (399)
T PRK05579        213 SGKMGYALARAAARRGADVTLVSGPVNL-P--T-----------PAG--VKRIDVESAQEMLDAVLAALPQADIFIMAAA  276 (399)
T ss_pred             cchHHHHHHHHHHHCCCEEEEeCCCccc-c--C-----------CCC--cEEEccCCHHHHHHHHHHhcCCCCEEEEccc
Confidence            8999999999999999999999987532 1  1           122  245788888877777653  26899999998


Q ss_pred             CC
Q 023110           82 RE   83 (287)
Q Consensus        82 ~~   83 (287)
                      +.
T Consensus       277 v~  278 (399)
T PRK05579        277 VA  278 (399)
T ss_pred             cc
Confidence            64

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.17  E-value=0.00097  Score=56.81  Aligned_cols=82  Identities=12%  Similarity=0.060  Sum_probs=54.5

Q ss_pred             CCcccchHHH--HHHHHHHcCCeEEEEEcCCcccccc--CCCCC-----hhhhhhhcCCeEEEEecCCChHHHHhhhhcC
Q 023110            1 MGGTRFIGVF--LSRLLVKEGHQVTLFTRGKAPIAQQ--LPGES-----DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (287)
Q Consensus         1 tGatG~iG~~--l~~~l~~~g~~V~~~~r~~~~~~~~--~~~~~-----~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~   71 (287)
                      ||+++-+|.+  +++.| ..|.+|+++++........  ...+.     ..........+..+.+|+++++.+.++++..
T Consensus        47 TGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I  125 (398)
T PRK13656         47 IGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKVIELI  125 (398)
T ss_pred             ECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            6999999999  89999 9999999998643221100  00000     0111111234667899999988887776542


Q ss_pred             -----CccEEEecCCCC
Q 023110           72 -----GFDVVYDINGRE   83 (287)
Q Consensus        72 -----~~d~vi~~a~~~   83 (287)
                           ++|++||+++..
T Consensus       126 ~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        126 KQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHhcCCCCEEEECCccC
Confidence                 699999998874

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.00  E-value=0.0022  Score=49.28  Aligned_cols=65  Identities=15%  Similarity=0.204  Sum_probs=39.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC--hHHHHhhhhcCCccEEEecC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d--~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||.+|.+|++.+..+|++|+.+....+-..              +.+++.+...-.+  .+.+.+.+.  +.|++|++|
T Consensus        27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~--------------p~~~~~i~v~sa~em~~~~~~~~~--~~Di~I~aA   90 (185)
T PF04127_consen   27 SSGKMGAALAEEAARRGAEVTLIHGPSSLPP--------------PPGVKVIRVESAEEMLEAVKELLP--SADIIIMAA   90 (185)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEEE-TTS------------------TTEEEEE-SSHHHHHHHHHHHGG--GGSEEEE-S
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCccccc--------------cccceEEEecchhhhhhhhccccC--cceeEEEec
Confidence            6899999999999999999999998853211              2467666654321  233344444  689999999


Q ss_pred             CCC
Q 023110           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      ++.
T Consensus        91 AVs   93 (185)
T PF04127_consen   91 AVS   93 (185)
T ss_dssp             B--
T ss_pred             chh
Confidence            874

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.86  E-value=0.0044  Score=52.64  Aligned_cols=87  Identities=17%  Similarity=0.162  Sum_probs=53.8

Q ss_pred             CCcccchHHHHHHHHHHcCC---eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      .||||++|+.|++.|.+++|   ++.++.+..+. .+.+.          ..+.+....|+.+.     .++  ++|+||
T Consensus         7 vGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~-g~~l~----------~~g~~i~v~d~~~~-----~~~--~vDvVf   68 (334)
T PRK14874          7 VGATGAVGREMLNILEERNFPVDKLRLLASARSA-GKELS----------FKGKELKVEDLTTF-----DFS--GVDIAL   68 (334)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcceEEEEEccccC-CCeee----------eCCceeEEeeCCHH-----HHc--CCCEEE
Confidence            49999999999999999776   45777776443 22221          12334455555432     234  899999


Q ss_pred             ecCCCCcccHHHHHHhC-CCCccEEEEecce
Q 023110           78 DINGREADEVEPILDAL-PNLEQFIYCSSAG  107 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~-~~~~~~i~~Ss~~  107 (287)
                      .+++.  ..+..++..+ +...++|=.|+..
T Consensus        69 ~A~g~--g~s~~~~~~~~~~G~~VIDlS~~~   97 (334)
T PRK14874         69 FSAGG--SVSKKYAPKAAAAGAVVIDNSSAF   97 (334)
T ss_pred             ECCCh--HHHHHHHHHHHhCCCEEEECCchh
Confidence            98763  3444444443 3223677677654

>PRK05086 malate dehydrogenase; Provisional

Probab=96.85  E-value=0.0034  Score=52.74  Aligned_cols=97  Identities=20%  Similarity=0.220  Sum_probs=58.6

Q ss_pred             CCcccchHHHHHHHHHH---cCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      +||+|.+|++++..|..   .++++++++|++......++ +     .. ......+.+  .+.+++.+.++  ++|+||
T Consensus         6 IGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alD-l-----~~-~~~~~~i~~--~~~~d~~~~l~--~~DiVI   74 (312)
T PRK05086          6 LGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVD-L-----SH-IPTAVKIKG--FSGEDPTPALE--GADVVL   74 (312)
T ss_pred             ECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehh-h-----hc-CCCCceEEE--eCCCCHHHHcC--CCCEEE
Confidence            48999999999998855   25688888887432100111 0     00 011122333  22334455666  899999


Q ss_pred             ecCCCCcc--------------cHHHHHHhCC--CCccEEEEeccee
Q 023110           78 DINGREAD--------------EVEPILDALP--NLEQFIYCSSAGV  108 (287)
Q Consensus        78 ~~a~~~~~--------------~~~~ll~~~~--~~~~~i~~Ss~~v  108 (287)
                      .++|....              .+.++++++.  +.+++|.+.|.-+
T Consensus        75 itaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~  121 (312)
T PRK05086         75 ISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPV  121 (312)
T ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCch
Confidence            99997422              3556666665  6677887777543

>PRK14982 acyl-ACP reductase; Provisional

Probab=96.79  E-value=0.00095  Score=56.21  Aligned_cols=64  Identities=22%  Similarity=0.252  Sum_probs=44.2

Q ss_pred             CCcccchHHHHHHHHHHc-C-CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKE-G-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+|++|+.++++|..+ | .+++++.|+..... .+.           .  ++..+++.   ++.+++.  ++|+|||
T Consensus       161 tGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~-~La-----------~--el~~~~i~---~l~~~l~--~aDiVv~  221 (340)
T PRK14982        161 VGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQ-ELQ-----------A--ELGGGKIL---SLEEALP--EADIVVW  221 (340)
T ss_pred             EccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHH-HHH-----------H--HhccccHH---hHHHHHc--cCCEEEE
Confidence            699999999999999865 4 68999988755421 111           0  11123332   4567777  8999999


Q ss_pred             cCCCC
Q 023110           79 INGRE   83 (287)
Q Consensus        79 ~a~~~   83 (287)
                      +++..
T Consensus       222 ~ts~~  226 (340)
T PRK14982        222 VASMP  226 (340)
T ss_pred             CCcCC
Confidence            99863

>cd00704 MDH Malate dehydrogenase

Probab=96.63  E-value=0.0048  Score=52.01  Aligned_cols=73  Identities=14%  Similarity=0.129  Sum_probs=42.4

Q ss_pred             CCcccchHHHHHHHHHHcC-------CeEEEEEcCC--ccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC
Q 023110            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGK--APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-------~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~   71 (287)
                      +||+|.+|++++..|...+       ++++.++++.  +.......++.+.... ...... +    .  ....+.++  
T Consensus         6 iGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~-~~~~~~-i----~--~~~~~~~~--   75 (323)
T cd00704           6 TGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFP-LLKGVV-I----T--TDPEEAFK--   75 (323)
T ss_pred             ECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhccc-ccCCcE-E----e--cChHHHhC--
Confidence            5899999999999999754       2689998876  3211111010000000 001111 1    1  23456666  


Q ss_pred             CccEEEecCCCC
Q 023110           72 GFDVVYDINGRE   83 (287)
Q Consensus        72 ~~d~vi~~a~~~   83 (287)
                      ++|+||++||..
T Consensus        76 ~aDiVVitAG~~   87 (323)
T cd00704          76 DVDVAILVGAFP   87 (323)
T ss_pred             CCCEEEEeCCCC
Confidence            999999999984

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=96.63  E-value=0.0059  Score=43.61  Aligned_cols=93  Identities=18%  Similarity=0.135  Sum_probs=50.0

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCe-EEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      +||||++|+.|++.|.++ .+++..+..+.......+.....     ..... +....+ .+.+.+    .  ++|+||.
T Consensus         5 vGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~-----~~~~~~~~~~~~-~~~~~~----~--~~Dvvf~   72 (121)
T PF01118_consen    5 VGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFP-----HPKGFEDLSVED-ADPEEL----S--DVDVVFL   72 (121)
T ss_dssp             ESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTG-----GGTTTEEEBEEE-TSGHHH----T--TESEEEE
T ss_pred             ECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcc-----ccccccceeEee-cchhHh----h--cCCEEEe
Confidence            499999999999999996 45666655544421111111000     01122 222222 344433    4  8999999


Q ss_pred             cCCCCcccHHHHHHhCC-CCccEEEEecce
Q 023110           79 INGREADEVEPILDALP-NLEQFIYCSSAG  107 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~  107 (287)
                      |.+  ......+...+. ...++|=.|+..
T Consensus        73 a~~--~~~~~~~~~~~~~~g~~ViD~s~~~  100 (121)
T PF01118_consen   73 ALP--HGASKELAPKLLKAGIKVIDLSGDF  100 (121)
T ss_dssp             -SC--HHHHHHHHHHHHHTTSEEEESSSTT
T ss_pred             cCc--hhHHHHHHHHHhhCCcEEEeCCHHH
Confidence            975  333444544433 334777666543

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.57  E-value=0.0054  Score=50.96  Aligned_cols=74  Identities=12%  Similarity=0.136  Sum_probs=51.1

Q ss_pred             CCcccchHHHHHHHHHHcCCe-EEEEEcCC---ccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      +|| |.+|++++..|.+.|.+ |+++.|+.   .+.. .+.    ..+......+.....|+.+.+++...++  .+|+|
T Consensus       132 ~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~-~l~----~~l~~~~~~~~~~~~d~~~~~~~~~~~~--~~Dil  203 (289)
T PRK12548        132 IGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAE-QTA----EKIKQEVPECIVNVYDLNDTEKLKAEIA--SSDIL  203 (289)
T ss_pred             ECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHH-HHH----HHHhhcCCCceeEEechhhhhHHHhhhc--cCCEE
Confidence            477 89999999999999986 99999986   2211 111    0111111234566788888878887777  78999


Q ss_pred             EecCCC
Q 023110           77 YDINGR   82 (287)
Q Consensus        77 i~~a~~   82 (287)
                      ||+...
T Consensus       204 INaTp~  209 (289)
T PRK12548        204 VNATLV  209 (289)
T ss_pred             EEeCCC
Confidence            998653

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.54  E-value=0.0094  Score=50.10  Aligned_cols=98  Identities=18%  Similarity=0.222  Sum_probs=56.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccC-----------C-CCCh-hhhhhhcCCeEEEEecCCChHHHHhhhh
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL-----------P-GESD-QEFAEFSSKILHLKGDRKDYDFVKSSLS   69 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----------~-~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~   69 (287)
                      |+|.+|.+++..|.++|++|++++|++.......           . .... ........+++.       ..++.++++
T Consensus         9 G~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~-------~~~~~~a~~   81 (308)
T PRK06129          9 GAGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV-------TDSLADAVA   81 (308)
T ss_pred             CccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE-------ECcHHHhhC
Confidence            4899999999999999999999999875422100           0 0000 000000111111       123555666


Q ss_pred             cCCccEEEecCCCCcccHHHHHHhCC--CCccEEEEecceee
Q 023110           70 AKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVY  109 (287)
Q Consensus        70 ~~~~d~vi~~a~~~~~~~~~ll~~~~--~~~~~i~~Ss~~v~  109 (287)
                        ++|+|+.+..........+++.+.  .....|+.||+..+
T Consensus        82 --~ad~Vi~avpe~~~~k~~~~~~l~~~~~~~~ii~ssts~~  121 (308)
T PRK06129         82 --DADYVQESAPENLELKRALFAELDALAPPHAILASSTSAL  121 (308)
T ss_pred             --CCCEEEECCcCCHHHHHHHHHHHHHhCCCcceEEEeCCCC
Confidence              899999987655444444554433  22345556766654

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.54  E-value=0.0047  Score=43.63  Aligned_cols=68  Identities=18%  Similarity=0.207  Sum_probs=51.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|.+.+++|+++++++.......           ..++.++.+|..+++.+.++-- .+++.|+-+...
T Consensus         5 G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-----------~~~~~~i~gd~~~~~~l~~a~i-~~a~~vv~~~~~   72 (116)
T PF02254_consen    5 GYGRIGREIAEQLKEGGIDVVVIDRDPERVEELR-----------EEGVEVIYGDATDPEVLERAGI-EKADAVVILTDD   72 (116)
T ss_dssp             S-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-----------HTTSEEEES-TTSHHHHHHTTG-GCESEEEEESSS
T ss_pred             cCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-----------hcccccccccchhhhHHhhcCc-cccCEEEEccCC
Confidence            4578999999999997779999999987632221           2568899999999998887532 278988887753

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.53  E-value=0.0035  Score=52.78  Aligned_cols=160  Identities=14%  Similarity=0.131  Sum_probs=82.7

Q ss_pred             CCcccchHHHHHHHHHHcCC-------eEEEEEcCCcc--ccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~   71 (287)
                      +|++|.+|++++..|+..|.       +++.++.....  ......++....... ...+++. .  .+    .+.++  
T Consensus         8 iGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~-~~~~~i~-~--~~----~~~~~--   77 (322)
T cd01338           8 TGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPL-LAEIVIT-D--DP----NVAFK--   77 (322)
T ss_pred             ECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccc-cCceEEe-c--Cc----HHHhC--
Confidence            48889999999999998764       78899885433  111111111000000 0122221 1  12    34455  


Q ss_pred             CccEEEecCCCCccc--------------HHHHHHhCC--C--CccEEEEecce---eeccCCCCCCCCCC-CCCCCcch
Q 023110           72 GFDVVYDINGREADE--------------VEPILDALP--N--LEQFIYCSSAG---VYLKSDLLPHCETD-TVDPKSRH  129 (287)
Q Consensus        72 ~~d~vi~~a~~~~~~--------------~~~ll~~~~--~--~~~~i~~Ss~~---v~~~~~~~~~~e~~-~~~~~~~~  129 (287)
                      ++|+||.+||.....              .+.+.+.+.  .  ...+|.+|...   +|-      ..... ..++...+
T Consensus        78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~------~~k~sg~~p~~~Vi  151 (322)
T cd01338          78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALI------AMKNAPDIPPDNFT  151 (322)
T ss_pred             CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHH------HHHHcCCCChHheE
Confidence            999999999884211              233334433  2  34566555321   000      00011 12222222


Q ss_pred             -hhhHHHHHHh----hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCc
Q 023110          130 -KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI  177 (287)
Q Consensus       130 -~~k~~~E~~~----~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~  177 (287)
                       .+++..+++.    +..+++...+|...|||++.. ..++.+......|.++
T Consensus       152 G~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~-s~vp~~S~~~v~g~pl  203 (322)
T cd01338         152 AMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP-TQYPDFTNATIGGKPA  203 (322)
T ss_pred             EehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc-cEEEehhhcEECCEeH
Confidence             4566555543    456888899999899999743 3444444443444444

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.48  E-value=0.0067  Score=51.16  Aligned_cols=64  Identities=14%  Similarity=0.071  Sum_probs=42.1

Q ss_pred             CCcccchHHHHHHHHHHcCC-------eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChH-----------
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-----------   62 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~-----------   62 (287)
                      +||+|.+|++++..|...+.       +++.+++.+...                 ..+-...|+.|..           
T Consensus         5 iGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----------------~a~g~~~Dl~d~~~~~~~~~~~~~   67 (324)
T TIGR01758         5 TGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----------------VLEGVVMELMDCAFPLLDGVVPTH   67 (324)
T ss_pred             ECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----------------ccceeEeehhcccchhcCceeccC
Confidence            58899999999999997543       688998865531                 0111122222211           


Q ss_pred             HHHhhhhcCCccEEEecCCCC
Q 023110           63 FVKSSLSAKGFDVVYDINGRE   83 (287)
Q Consensus        63 ~~~~~~~~~~~d~vi~~a~~~   83 (287)
                      ...+.++  ++|+||++||..
T Consensus        68 ~~~~~~~--~aDiVVitAG~~   86 (324)
T TIGR01758        68 DPAVAFT--DVDVAILVGAFP   86 (324)
T ss_pred             ChHHHhC--CCCEEEEcCCCC
Confidence            2345566  999999999985

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=96.45  E-value=0.0086  Score=50.91  Aligned_cols=86  Identities=14%  Similarity=0.145  Sum_probs=52.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEE---EEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~---~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      .||||++|+.|++.|.+++|.+..   +.+..+. .+.+.          ..+.+....|+. .    ..++  ++|+||
T Consensus         5 vGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~-g~~~~----------~~~~~~~~~~~~-~----~~~~--~~D~v~   66 (339)
T TIGR01296         5 VGATGAVGQEMLKILEERNFPIDKLVLLASDRSA-GRKVT----------FKGKELEVNEAK-I----ESFE--GIDIAL   66 (339)
T ss_pred             EcCCCHHHHHHHHHHHhCCCChhhEEEEeccccC-CCeee----------eCCeeEEEEeCC-h----HHhc--CCCEEE
Confidence            499999999999999998876543   3354332 11221          123456666663 2    1235  899999


Q ss_pred             ecCCCCcccHHHHHHhC-C-CCccEEEEecce
Q 023110           78 DINGREADEVEPILDAL-P-NLEQFIYCSSAG  107 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~-~-~~~~~i~~Ss~~  107 (287)
                      .+++..  .+..++..+ + +. ++|=.|+..
T Consensus        67 ~a~g~~--~s~~~a~~~~~~G~-~VID~ss~~   95 (339)
T TIGR01296        67 FSAGGS--VSKEFAPKAAKCGA-IVIDNTSAF   95 (339)
T ss_pred             ECCCHH--HHHHHHHHHHHCCC-EEEECCHHH
Confidence            998743  334444433 3 43 576667644

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=96.43  E-value=0.0097  Score=51.42  Aligned_cols=65  Identities=18%  Similarity=0.231  Sum_probs=47.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHH-Hhhhhc--CCccEEEec
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLSA--KGFDVVYDI   79 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~-~~~~~~--~~~d~vi~~   79 (287)
                      +||.+|.++++.|..+|++|+.+.+.....   .           ...+  ...|+.+.+++ ..+++.  .++|++|++
T Consensus       209 SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~-----------~~~~--~~~~v~~~~~~~~~~~~~~~~~~D~~i~~  272 (390)
T TIGR00521       209 SSGKMGLALAEAAYKRGADVTLITGPVSLL---T-----------PPGV--KSIKVSTAEEMLEAALNELAKDFDIFISA  272 (390)
T ss_pred             CcchHHHHHHHHHHHCCCEEEEeCCCCccC---C-----------CCCc--EEEEeccHHHHHHHHHHhhcccCCEEEEc
Confidence            468999999999999999999988765431   1           1222  45788887777 555522  268999999


Q ss_pred             CCCC
Q 023110           80 NGRE   83 (287)
Q Consensus        80 a~~~   83 (287)
                      ||+.
T Consensus       273 Aavs  276 (390)
T TIGR00521       273 AAVA  276 (390)
T ss_pred             cccc
Confidence            9874

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.39  E-value=0.0056  Score=54.40  Aligned_cols=68  Identities=16%  Similarity=0.293  Sum_probs=53.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d~vi~~a~   81 (287)
                      |.|.+|+++++.|.+.|++|+++++++.... .+..         ..+++++.+|..+...+.++ ++  ++|.||-+..
T Consensus         7 G~G~ig~~~a~~L~~~g~~v~vid~~~~~~~-~~~~---------~~~~~~~~gd~~~~~~l~~~~~~--~a~~vi~~~~   74 (453)
T PRK09496          7 GAGQVGYTLAENLSGENNDVTVIDTDEERLR-RLQD---------RLDVRTVVGNGSSPDVLREAGAE--DADLLIAVTD   74 (453)
T ss_pred             CCCHHHHHHHHHHHhCCCcEEEEECCHHHHH-HHHh---------hcCEEEEEeCCCCHHHHHHcCCC--cCCEEEEecC
Confidence            3499999999999999999999999876532 1110         14688999999999888887 66  8999988765


Q ss_pred             C
Q 023110           82 R   82 (287)
Q Consensus        82 ~   82 (287)
                      .
T Consensus        75 ~   75 (453)
T PRK09496         75 S   75 (453)
T ss_pred             C
Confidence            3

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=96.22  E-value=0.0045  Score=49.14  Aligned_cols=106  Identities=13%  Similarity=0.058  Sum_probs=66.8

Q ss_pred             CCcccchHHHHHHHHHHcC-----CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----
Q 023110            1 MGGTRFIGVFLSRLLVKEG-----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----   70 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----   70 (287)
                      ||++..+|-.|+.+|++..     ..+...+|+-++..+....+. .......-.++++..|+++..++..+.+.     
T Consensus         9 TGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk-~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~~rf   87 (341)
T KOG1478|consen    9 TGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALK-AFHPKSTIEVTYVLVDVSNMQSVFRASKDIKQRF   87 (341)
T ss_pred             ecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHH-HhCCCceeEEEEEEEehhhHHHHHHHHHHHHHHh
Confidence            7999999999999999874     357778888777432221100 00000023688999999987766555432     


Q ss_pred             CCccEEEecCCCCcccHHHHHHhCC--CCccEEEEecce
Q 023110           71 KGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAG  107 (287)
Q Consensus        71 ~~~d~vi~~a~~~~~~~~~ll~~~~--~~~~~i~~Ss~~  107 (287)
                      .+.|.|+-+||.......+.+.++.  -..+++.+.+..
T Consensus        88 ~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt  126 (341)
T KOG1478|consen   88 QRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPT  126 (341)
T ss_pred             hhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCch
Confidence            1789999999987655555544443  223444444433

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.22  E-value=0.008  Score=46.98  Aligned_cols=139  Identities=16%  Similarity=0.165  Sum_probs=79.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d   74 (287)
                      ||+|-.||..++..+..++.+.....+..... .+.+.       -...+......+|+.+...+.+.++.     .+-|
T Consensus        12 TGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~-------v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~   84 (253)
T KOG1204|consen   12 TGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLK-------VAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRD   84 (253)
T ss_pred             ecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceE-------EEecCCcceechHHHHHHHHHHHHhhhhhcCCcee
Confidence            79999999999999998876544444332221 11110       00013444556666665544444432     2688


Q ss_pred             EEEecCCCCcc------------c---------------HHHHHHhCC-C--CccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           75 VVYDINGREAD------------E---------------VEPILDALP-N--LEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        75 ~vi~~a~~~~~------------~---------------~~~ll~~~~-~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      .|||+||....            .               ....+...+ .  .+.++++||.+.--           +..
T Consensus        85 iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~-----------p~~  153 (253)
T KOG1204|consen   85 IIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR-----------PFS  153 (253)
T ss_pred             EEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc-----------ccc
Confidence            99999997311            0               112333333 2  37789999876521           222


Q ss_pred             CCcch-hhhHHHHHHh-----hhC-CCcEEEEecCeeecC
Q 023110          125 PKSRH-KGKLNTESVL-----ESK-GVNWTSLRPVYIYGP  157 (287)
Q Consensus       125 ~~~~~-~~k~~~E~~~-----~~~-~~~~~ilR~~~v~g~  157 (287)
                      ....| .+|++.+-+.     ++. ++.++.++||.+=.+
T Consensus       154 ~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~  193 (253)
T KOG1204|consen  154 SWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQ  193 (253)
T ss_pred             HHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccch
Confidence            22335 7777666544     344 788899999877443

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.13  E-value=0.018  Score=47.41  Aligned_cols=92  Identities=16%  Similarity=0.174  Sum_probs=63.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|+.| +|+--++.....|++|++++++..+..+.++          ..+.+.+..-..|++.+.++.+  -.|.++|+.
T Consensus       188 ~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~----------~LGAd~fv~~~~d~d~~~~~~~--~~dg~~~~v  254 (360)
T KOG0023|consen  188 VGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIK----------SLGADVFVDSTEDPDIMKAIMK--TTDGGIDTV  254 (360)
T ss_pred             ecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHH----------hcCcceeEEecCCHHHHHHHHH--hhcCcceee
Confidence            46777 9988888888899999999999866444444          2356655544458888888887  445555554


Q ss_pred             CC-CcccHHHHHHhCCCCccEEEEec
Q 023110           81 GR-EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~-~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      .. .......+++.++...++|+++-
T Consensus       255 ~~~a~~~~~~~~~~lk~~Gt~V~vg~  280 (360)
T KOG0023|consen  255 SNLAEHALEPLLGLLKVNGTLVLVGL  280 (360)
T ss_pred             eeccccchHHHHHHhhcCCEEEEEeC
Confidence            31 23345567777775568888874

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.12  E-value=0.0063  Score=45.96  Aligned_cols=93  Identities=18%  Similarity=0.183  Sum_probs=50.5

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCC--ChhhhhhhcCCeEEEEecCCChHHHHhhhhc-------CCc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF   73 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-------~~~   73 (287)
                      |.|-+|+.+++.|.+.||+|++.+|+++.........  .-....+...+.+++..-+.+.+.+++++..       ..-
T Consensus         8 GlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~~~l~~g   87 (163)
T PF03446_consen    8 GLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENILAGLRPG   87 (163)
T ss_dssp             --SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHGGGS-TT
T ss_pred             chHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHhhccccc
Confidence            5689999999999999999999999876532211100  0000111122334555555565555555442       123


Q ss_pred             cEEEecCCCCcccHHHHHHhCC
Q 023110           74 DVVYDINGREADEVEPILDALP   95 (287)
Q Consensus        74 d~vi~~a~~~~~~~~~ll~~~~   95 (287)
                      .++|+++.........+.+.+.
T Consensus        88 ~iiid~sT~~p~~~~~~~~~~~  109 (163)
T PF03446_consen   88 KIIIDMSTISPETSRELAERLA  109 (163)
T ss_dssp             EEEEE-SS--HHHHHHHHHHHH
T ss_pred             eEEEecCCcchhhhhhhhhhhh
Confidence            4566666666666666666654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.11  E-value=0.013  Score=49.63  Aligned_cols=89  Identities=16%  Similarity=0.147  Sum_probs=51.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeE---EEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQV---TLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V---~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      +||||++|+.|++.|.+++|.+   ..+ ++.....+.+.          ..+.   ..++.+.+.. + ++  ++|+||
T Consensus        10 vGATG~vG~eLlrlL~~~~hP~~~l~~v-~s~~~aG~~l~----------~~~~---~l~~~~~~~~-~-~~--~vD~vF   71 (336)
T PRK05671         10 VGATGTVGEALVQILEERDFPVGTLHLL-ASSESAGHSVP----------FAGK---NLRVREVDSF-D-FS--QVQLAF   71 (336)
T ss_pred             EccCCHHHHHHHHHHhhCCCCceEEEEE-ECcccCCCeec----------cCCc---ceEEeeCChH-H-hc--CCCEEE
Confidence            5999999999999999876643   333 33222121221          1121   2233222221 2 45  899999


Q ss_pred             ecCCCCcccHHHHHHhCC-CCccEEEEecceee
Q 023110           78 DINGREADEVEPILDALP-NLEQFIYCSSAGVY  109 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~  109 (287)
                      .+.+.  .....+++.+. ...++|=.|+..-+
T Consensus        72 la~p~--~~s~~~v~~~~~~G~~VIDlS~~fR~  102 (336)
T PRK05671         72 FAAGA--AVSRSFAEKARAAGCSVIDLSGALPS  102 (336)
T ss_pred             EcCCH--HHHHHHHHHHHHCCCeEEECchhhcC
Confidence            98763  34445666553 44578888887643

>PRK04148 hypothetical protein; Provisional

Probab=95.98  E-value=0.009  Score=43.08  Aligned_cols=76  Identities=13%  Similarity=0.158  Sum_probs=54.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.| .|.+++..|.+.|++|++++.++.......           ...++.+.+|+++++.  ++-+  ++|.|+-+- .
T Consensus        24 G~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-----------~~~~~~v~dDlf~p~~--~~y~--~a~liysir-p   86 (134)
T PRK04148         24 GIG-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-----------KLGLNAFVDDLFNPNL--EIYK--NAKLIYSIR-P   86 (134)
T ss_pred             Eec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------HhCCeEEECcCCCCCH--HHHh--cCCEEEEeC-C
Confidence            456 788899999999999999999987632111           2467899999998763  3444  788877653 3


Q ss_pred             CcccHHHHHHhCC
Q 023110           83 EADEVEPILDALP   95 (287)
Q Consensus        83 ~~~~~~~ll~~~~   95 (287)
                      ..+-...+++.++
T Consensus        87 p~el~~~~~~la~   99 (134)
T PRK04148         87 PRDLQPFILELAK   99 (134)
T ss_pred             CHHHHHHHHHHHH
Confidence            3444556666665

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.96  E-value=0.11  Score=40.59  Aligned_cols=106  Identities=15%  Similarity=0.217  Sum_probs=64.4

Q ss_pred             CcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCC---------CC-------hhhhhhhcCCeE--EEEecCCC-h
Q 023110            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG---------ES-------DQEFAEFSSKIL--HLKGDRKD-Y   61 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~---------~~-------~~~~~~~~~~~~--~i~~D~~d-~   61 (287)
                      |++| +|.++++.|...|. +++.++.+.-.....-+.         ..       ...+.+..+.++  .+..++.+ .
T Consensus        26 G~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~~~~~~~~  104 (198)
T cd01485          26 GAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVEEDSLSND  104 (198)
T ss_pred             CCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEecccccch
Confidence            4444 99999999999995 588888764321111000         00       112333344444  44444432 4


Q ss_pred             HHHHhhhhcCCccEEEecCCCCcccHHHHHHhCC-CCccEEEEecceeecc
Q 023110           62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (287)
Q Consensus        62 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~  111 (287)
                      +...+.++  ++|+||.+.. +......+-+.|+ ...++|+.++.+.||.
T Consensus       105 ~~~~~~~~--~~dvVi~~~d-~~~~~~~ln~~c~~~~ip~i~~~~~G~~G~  152 (198)
T cd01485         105 SNIEEYLQ--KFTLVIATEE-NYERTAKVNDVCRKHHIPFISCATYGLIGY  152 (198)
T ss_pred             hhHHHHHh--CCCEEEECCC-CHHHHHHHHHHHHHcCCCEEEEEeecCEEE
Confidence            45566777  8999998854 3444445556676 5679999998887775

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=95.94  E-value=0.013  Score=50.08  Aligned_cols=96  Identities=15%  Similarity=0.104  Sum_probs=53.6

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEE-EcCCccccccCCCCChhhhhhhcCCeEEE-EecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      .||||++|+.+++.|.++ +.+++.+ +++.+. .+.+...        ...+... ..++.+. +..++++  ++|+||
T Consensus         6 iGATG~vG~ellr~L~~hP~~el~~l~~s~~sa-gk~~~~~--------~~~l~~~~~~~~~~~-~~~~~~~--~~DvVf   73 (346)
T TIGR01850         6 VGASGYTGGELLRLLLNHPEVEITYLVSSRESA-GKPVSEV--------HPHLRGLVDLNLEPI-DEEEIAE--DADVVF   73 (346)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEeccchhc-CCChHHh--------CccccccCCceeecC-CHHHhhc--CCCEEE
Confidence            499999999999999987 6788855 433221 1111100        0111111 1112211 1233444  799999


Q ss_pred             ecCCCCcccHHHHHHhC-CCCccEEEEecceeec
Q 023110           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGVYL  110 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~-~~~~~~i~~Ss~~v~~  110 (287)
                      .+...  .....++..+ +..+++|=.|+..=+.
T Consensus        74 ~alP~--~~s~~~~~~~~~~G~~VIDlS~~fR~~  105 (346)
T TIGR01850        74 LALPH--GVSAELAPELLAAGVKVIDLSADFRLK  105 (346)
T ss_pred             ECCCc--hHHHHHHHHHHhCCCEEEeCChhhhcC
Confidence            98753  3445555554 3447899899876443

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.90  E-value=0.026  Score=50.22  Aligned_cols=70  Identities=29%  Similarity=0.396  Sum_probs=52.2

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|.+.|++|+++++++..... +.        +...++.++.+|..+++.+.++-- .++|+||-+...
T Consensus       238 G~G~~g~~l~~~L~~~~~~v~vid~~~~~~~~-~~--------~~~~~~~~i~gd~~~~~~L~~~~~-~~a~~vi~~~~~  307 (453)
T PRK09496        238 GGGNIGYYLAKLLEKEGYSVKLIERDPERAEE-LA--------EELPNTLVLHGDGTDQELLEEEGI-DEADAFIALTND  307 (453)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHH-HH--------HHCCCCeEEECCCCCHHHHHhcCC-ccCCEEEECCCC
Confidence            45999999999999999999999998765321 11        112467889999999988864432 278999876653

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=95.66  E-value=0.2  Score=42.83  Aligned_cols=78  Identities=17%  Similarity=0.257  Sum_probs=49.2

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcccccc---CCCCChhhhhhhcC-CeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ---LPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~-~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |+||+|-...-.|.+.||+|++++-++++....   ...+.++.++++.. +..  .+-+.-..+...+++  +.|++|-
T Consensus         7 GtGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~--~gRl~fTtd~~~a~~--~adv~fI   82 (414)
T COG1004           7 GTGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLA--SGRLRFTTDYEEAVK--DADVVFI   82 (414)
T ss_pred             CCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccc--cCcEEEEcCHHHHHh--cCCEEEE
Confidence            799999999999999999999999998874221   11222222322211 111  111222334566676  8999998


Q ss_pred             cCCCCc
Q 023110           79 INGREA   84 (287)
Q Consensus        79 ~a~~~~   84 (287)
                      +.|.+.
T Consensus        83 avgTP~   88 (414)
T COG1004          83 AVGTPP   88 (414)
T ss_pred             EcCCCC
Confidence            888753

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=95.65  E-value=0.029  Score=46.02  Aligned_cols=64  Identities=17%  Similarity=0.062  Sum_probs=53.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||-+|+.++=.+.+.|.+|++++|-...+..+..             -..+..|+.|.+.++.+++..++|.||--
T Consensus        19 GSGELGKEvaIe~QRLG~eViAVDrY~~APAmqVA-------------hrs~Vi~MlD~~al~avv~rekPd~IVpE   82 (394)
T COG0027          19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-------------HRSYVIDMLDGDALRAVVEREKPDYIVPE   82 (394)
T ss_pred             cCCccchHHHHHHHhcCCEEEEecCcCCChhhhhh-------------hheeeeeccCHHHHHHHHHhhCCCeeeeh
Confidence            68999999999999999999999998876544442             12356899999999999999999999943

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.60  E-value=0.028  Score=40.29  Aligned_cols=86  Identities=17%  Similarity=0.171  Sum_probs=48.7

Q ss_pred             CCcccchHHHHHHHHHH-cCCeEEEEE-cCCcccc-ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVK-EGHQVTLFT-RGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~-~g~~V~~~~-r~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      .|++|.+|+.+++.+.+ .++++.+.. |+.+... +.+.     .+    .+..  .....-.+++.++++  .+|+||
T Consensus         6 ~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g-----~~----~~~~--~~~~~v~~~l~~~~~--~~DVvI   72 (124)
T PF01113_consen    6 VGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVG-----EL----AGIG--PLGVPVTDDLEELLE--EADVVI   72 (124)
T ss_dssp             ETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCH-----HH----CTSS--T-SSBEBS-HHHHTT--H-SEEE
T ss_pred             ECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhh-----hh----hCcC--CcccccchhHHHhcc--cCCEEE
Confidence            38899999999999999 588877755 4442211 1110     00    0000  011111256788888  599999


Q ss_pred             ecCCCCcccHHHHHHhCC-CCccEE
Q 023110           78 DINGREADEVEPILDALP-NLEQFI  101 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~-~~~~~i  101 (287)
                      ++.  ....+...++.+. ...++|
T Consensus        73 DfT--~p~~~~~~~~~~~~~g~~~V   95 (124)
T PF01113_consen   73 DFT--NPDAVYDNLEYALKHGVPLV   95 (124)
T ss_dssp             EES---HHHHHHHHHHHHHHT-EEE
T ss_pred             EcC--ChHHhHHHHHHHHhCCCCEE
Confidence            998  4566666666655 434554

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=95.54  E-value=0.032  Score=47.64  Aligned_cols=94  Identities=19%  Similarity=0.136  Sum_probs=54.7

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEE-EecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      +||||++|+.+++.|.+. +++++++.++.+. .+.+...        ...+..+ ..++.+.+..  .++  ++|+|+.
T Consensus         8 iGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~-g~~l~~~--------~~~~~~~~~~~~~~~~~~--~~~--~vD~Vf~   74 (343)
T PRK00436          8 VGASGYTGGELLRLLLNHPEVEIVAVTSRSSA-GKPLSDV--------HPHLRGLVDLVLEPLDPE--ILA--GADVVFL   74 (343)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEECcccc-CcchHHh--------CcccccccCceeecCCHH--Hhc--CCCEEEE
Confidence            499999999999999987 6788887774322 1111100        0111111 1122232222  334  7999998


Q ss_pred             cCCCCcccHHHHHHhC-CCCccEEEEecceee
Q 023110           79 INGREADEVEPILDAL-PNLEQFIYCSSAGVY  109 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~-~~~~~~i~~Ss~~v~  109 (287)
                      +...  .....++..+ +..+++|=.|+..-+
T Consensus        75 alP~--~~~~~~v~~a~~aG~~VID~S~~fR~  104 (343)
T PRK00436         75 ALPH--GVSMDLAPQLLEAGVKVIDLSADFRL  104 (343)
T ss_pred             CCCc--HHHHHHHHHHHhCCCEEEECCcccCC
Confidence            7753  3444444444 355788888887655

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=95.47  E-value=0.05  Score=44.40  Aligned_cols=63  Identities=13%  Similarity=-0.000  Sum_probs=38.3

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      +|++|.+|+.+++.+.+. +.++.++...........                 -..++...+++.++++  ++|+||++
T Consensus         7 iG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-----------------~~~~i~~~~dl~~ll~--~~DvVid~   67 (257)
T PRK00048          7 AGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-----------------GALGVAITDDLEAVLA--DADVLIDF   67 (257)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-----------------CCCCccccCCHHHhcc--CCCEEEEC
Confidence            478899999999998875 688888554332211110                 0112222344555665  68888888


Q ss_pred             CCC
Q 023110           80 NGR   82 (287)
Q Consensus        80 a~~   82 (287)
                      +..
T Consensus        68 t~p   70 (257)
T PRK00048         68 TTP   70 (257)
T ss_pred             CCH
Confidence            743

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=95.42  E-value=0.1  Score=44.50  Aligned_cols=89  Identities=13%  Similarity=0.076  Sum_probs=50.7

Q ss_pred             CCcccchHHHHHHHHHHcCCe---EEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      .||||++|+.|++.|.+++|.   +..+....+. .+.+.          ..+.+....++ +.+    .++  ++|+||
T Consensus        13 vGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsa-Gk~~~----------~~~~~~~v~~~-~~~----~~~--~~D~vf   74 (344)
T PLN02383         13 VGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSA-GKKVT----------FEGRDYTVEEL-TED----SFD--GVDIAL   74 (344)
T ss_pred             EcCCChHHHHHHHHHHhCCCCcceEEEEEccCCC-CCeee----------ecCceeEEEeC-CHH----HHc--CCCEEE
Confidence            499999999999999997763   4333322111 11111          01223333333 222    234  799999


Q ss_pred             ecCCCCcccHHHHHHhC-CCCccEEEEecceee
Q 023110           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGVY  109 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~-~~~~~~i~~Ss~~v~  109 (287)
                      .+++..  ....++..+ +...++|=.|+..-+
T Consensus        75 ~a~p~~--~s~~~~~~~~~~g~~VIDlS~~fR~  105 (344)
T PLN02383         75 FSAGGS--ISKKFGPIAVDKGAVVVDNSSAFRM  105 (344)
T ss_pred             ECCCcH--HHHHHHHHHHhCCCEEEECCchhhc
Confidence            887643  444444443 344678888876643

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=95.42  E-value=0.025  Score=46.88  Aligned_cols=84  Identities=18%  Similarity=0.201  Sum_probs=53.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|++..|+........           ..+...     ...+.+.+.++  ++|+||++...
T Consensus       158 G~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-----------~~g~~~-----~~~~~l~~~l~--~aDiVint~P~  219 (287)
T TIGR02853       158 GFGRTGMTIARTFSALGARVFVGARSSADLARIT-----------EMGLIP-----FPLNKLEEKVA--EIDIVINTIPA  219 (287)
T ss_pred             cChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HCCCee-----ecHHHHHHHhc--cCCEEEECCCh
Confidence            4588999999999999999999999865421110           012221     12345667777  89999998754


Q ss_pred             CcccHHHHHHhCCCCccEEEEec
Q 023110           83 EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ... ....++.++...-+|-++|
T Consensus       220 ~ii-~~~~l~~~k~~aliIDlas  241 (287)
T TIGR02853       220 LVL-TADVLSKLPKHAVIIDLAS  241 (287)
T ss_pred             HHh-CHHHHhcCCCCeEEEEeCc
Confidence            322 2345555654445555554

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.37  E-value=0.24  Score=42.16  Aligned_cols=105  Identities=19%  Similarity=0.259  Sum_probs=65.3

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCC-------C---------ChhhhhhhcCC--eEEEEecCCChHH
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG-------E---------SDQEFAEFSSK--ILHLKGDRKDYDF   63 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~-------~---------~~~~~~~~~~~--~~~i~~D~~d~~~   63 (287)
                      |.|.+|+.++..|...|. +|++++++.-.....-++       .         ....+.+..+.  ++.+..++. .+.
T Consensus        31 G~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~~~~-~~~  109 (339)
T PRK07688         31 GAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQDVT-AEE  109 (339)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEeccCC-HHH
Confidence            569999999999999997 899999875321110000       0         00122222333  445555653 455


Q ss_pred             HHhhhhcCCccEEEecCCCCcccHHHHHHhCC-CCccEEEEecceeecc
Q 023110           64 VKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (287)
Q Consensus        64 ~~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~  111 (287)
                      +.++++  ++|+||.+.. +...-..+-++|. ..+++|+.++.+.||.
T Consensus       110 ~~~~~~--~~DlVid~~D-n~~~r~~ln~~~~~~~iP~i~~~~~g~~G~  155 (339)
T PRK07688        110 LEELVT--GVDLIIDATD-NFETRFIVNDAAQKYGIPWIYGACVGSYGL  155 (339)
T ss_pred             HHHHHc--CCCEEEEcCC-CHHHHHHHHHHHHHhCCCEEEEeeeeeeeE
Confidence            677787  8999999965 3333333445555 5578999888777663

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.35  E-value=0.04  Score=50.38  Aligned_cols=68  Identities=12%  Similarity=0.165  Sum_probs=52.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.++++|.++|++|++++++++... .++          ..+...+.+|..|++.++++-- .++|.++-+.+.
T Consensus       424 G~G~~G~~la~~L~~~g~~vvvId~d~~~~~-~~~----------~~g~~~i~GD~~~~~~L~~a~i-~~a~~viv~~~~  491 (558)
T PRK10669        424 GYGRVGSLLGEKLLAAGIPLVVIETSRTRVD-ELR----------ERGIRAVLGNAANEEIMQLAHL-DCARWLLLTIPN  491 (558)
T ss_pred             CCChHHHHHHHHHHHCCCCEEEEECCHHHHH-HHH----------HCCCeEEEcCCCCHHHHHhcCc-cccCEEEEEcCC
Confidence            5789999999999999999999999877632 222          2578899999999988875432 278887766543

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.34  E-value=0.12  Score=43.54  Aligned_cols=79  Identities=16%  Similarity=0.244  Sum_probs=51.3

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|.....                .++..+    ...+++.++++  ++|+|+.+...
T Consensus       143 G~G~IG~~vA~~l~afG~~V~~~~~~~~~~----------------~~~~~~----~~~~~l~e~l~--~aDvvv~~lPl  200 (312)
T PRK15469        143 GAGVLGSKVAQSLQTWGFPLRCWSRSRKSW----------------PGVQSF----AGREELSAFLS--QTRVLINLLPN  200 (312)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCCCCC----------------CCceee----cccccHHHHHh--cCCEEEECCCC
Confidence            679999999999999999999998865431                111111    12446778888  88988877643


Q ss_pred             CcccHHHH-----HHhCCCCccEEEEe
Q 023110           83 EADEVEPI-----LDALPNLEQFIYCS  104 (287)
Q Consensus        83 ~~~~~~~l-----l~~~~~~~~~i~~S  104 (287)
                      + ..++.+     ++.++...-||.++
T Consensus       201 t-~~T~~li~~~~l~~mk~ga~lIN~a  226 (312)
T PRK15469        201 T-PETVGIINQQLLEQLPDGAYLLNLA  226 (312)
T ss_pred             C-HHHHHHhHHHHHhcCCCCcEEEECC
Confidence            2 234443     34444444566555

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.33  E-value=0.058  Score=46.20  Aligned_cols=31  Identities=23%  Similarity=0.409  Sum_probs=25.3

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~   31 (287)
                      +||||++|+.|++.|.++. .+++++.++.+.
T Consensus         9 ~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~   40 (349)
T PRK08664          9 LGATGMVGQRFVQLLANHPWFEVTALAASERS   40 (349)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEEcChhh
Confidence            4999999999999999875 488888666544

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.26  E-value=0.12  Score=43.89  Aligned_cols=103  Identities=17%  Similarity=0.263  Sum_probs=63.9

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCC----C------------ChhhhhhhcCC--eEEEEecCCChHH
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG----E------------SDQEFAEFSSK--ILHLKGDRKDYDF   63 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~----~------------~~~~~~~~~~~--~~~i~~D~~d~~~   63 (287)
                      |.|-+|+++++.|...|. ++++++++.-+....-++    .            ....+.+..+.  ++.+..|+. .+.
T Consensus        31 G~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~~~~-~~~  109 (338)
T PRK12475         31 GAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVTDVT-VEE  109 (338)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEeccCC-HHH
Confidence            467799999999999997 888888875321110000    0            00122222233  455666664 456


Q ss_pred             HHhhhhcCCccEEEecCCCCcccHHHHH-HhCC-CCccEEEEecceeec
Q 023110           64 VKSSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        64 ~~~~~~~~~~d~vi~~a~~~~~~~~~ll-~~~~-~~~~~i~~Ss~~v~~  110 (287)
                      +.++++  ++|+||.+...  ..++.++ ++|. ...++|+.+..+.+|
T Consensus       110 ~~~~~~--~~DlVid~~D~--~~~r~~in~~~~~~~ip~i~~~~~g~~G  154 (338)
T PRK12475        110 LEELVK--EVDLIIDATDN--FDTRLLINDLSQKYNIPWIYGGCVGSYG  154 (338)
T ss_pred             HHHHhc--CCCEEEEcCCC--HHHHHHHHHHHHHcCCCEEEEEecccEE
Confidence            778888  89999999752  3344444 4454 557888888776665

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=95.19  E-value=0.036  Score=48.60  Aligned_cols=30  Identities=30%  Similarity=0.501  Sum_probs=27.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~   32 (287)
                      |.|++|..++..|.+.|++|+++++++...
T Consensus         7 GlG~~G~~lA~~La~~G~~V~~~d~~~~~v   36 (411)
T TIGR03026         7 GLGYVGLPLAALLADLGHEVTGVDIDQEKV   36 (411)
T ss_pred             CCCchhHHHHHHHHhcCCeEEEEECCHHHH
Confidence            689999999999999999999999987763

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=95.12  E-value=0.084  Score=46.74  Aligned_cols=65  Identities=11%  Similarity=0.032  Sum_probs=45.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhh-cCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-AKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-~~~~d~vi~~a~   81 (287)
                      +||.+|.+|++.+..+|.+|+.++-...-.   .           +.+++++..+  ..+++.+++. ....|++|++|+
T Consensus       280 SSGkmG~alA~aa~~~GA~VtlI~Gp~~~~---~-----------p~~v~~i~V~--ta~eM~~av~~~~~~Di~I~aAA  343 (475)
T PRK13982        280 SSGKQGFAIAAAAAAAGAEVTLISGPVDLA---D-----------PQGVKVIHVE--SARQMLAAVEAALPADIAIFAAA  343 (475)
T ss_pred             CchHHHHHHHHHHHHCCCcEEEEeCCcCCC---C-----------CCCceEEEec--CHHHHHHHHHhhCCCCEEEEecc
Confidence            689999999999999999999998543210   1           3467766543  4444444443 235799999998


Q ss_pred             CC
Q 023110           82 RE   83 (287)
Q Consensus        82 ~~   83 (287)
                      +.
T Consensus       344 Va  345 (475)
T PRK13982        344 VA  345 (475)
T ss_pred             cc
Confidence            63

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.08  E-value=0.038  Score=42.36  Aligned_cols=85  Identities=16%  Similarity=0.095  Sum_probs=51.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-||+.+++.|...|.+|++.+|.........           ...+        ...++.++++  .+|+|+.+...
T Consensus        43 G~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-----------~~~~--------~~~~l~ell~--~aDiv~~~~pl  101 (178)
T PF02826_consen   43 GYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-----------EFGV--------EYVSLDELLA--QADIVSLHLPL  101 (178)
T ss_dssp             STSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-----------HTTE--------EESSHHHHHH--H-SEEEE-SSS
T ss_pred             EEcCCcCeEeeeeecCCceeEEecccCChhhhcc-----------cccc--------eeeehhhhcc--hhhhhhhhhcc
Confidence            6799999999999999999999999987621000           0111        1224666777  78887766543


Q ss_pred             Cc----ccHHHHHHhCCCCccEEEEeccee
Q 023110           83 EA----DEVEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~----~~~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +.    .-....++.++....||.++-..+
T Consensus       102 t~~T~~li~~~~l~~mk~ga~lvN~aRG~~  131 (178)
T PF02826_consen  102 TPETRGLINAEFLAKMKPGAVLVNVARGEL  131 (178)
T ss_dssp             STTTTTSBSHHHHHTSTTTEEEEESSSGGG
T ss_pred             ccccceeeeeeeeeccccceEEEeccchhh
Confidence            22    123445666665556666654443

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.08  E-value=0.052  Score=52.62  Aligned_cols=69  Identities=14%  Similarity=-0.002  Sum_probs=50.7

Q ss_pred             cccchHHHHHHHHHHc-CCe-------------EEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhh
Q 023110            3 GTRFIGVFLSRLLVKE-GHQ-------------VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL   68 (287)
Q Consensus         3 atG~iG~~l~~~l~~~-g~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~   68 (287)
                      |+|++|+..++.|.+. +++             |.+.+++..... .+        .+...+++.++.|+.|.+++.+++
T Consensus       576 GAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~-~l--------a~~~~~~~~v~lDv~D~e~L~~~v  646 (1042)
T PLN02819        576 GAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAK-ET--------VEGIENAEAVQLDVSDSESLLKYV  646 (1042)
T ss_pred             CCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHH-HH--------HHhcCCCceEEeecCCHHHHHHhh
Confidence            4699999999999875 333             666666654421 11        111236778999999999999999


Q ss_pred             hcCCccEEEecCCC
Q 023110           69 SAKGFDVVYDINGR   82 (287)
Q Consensus        69 ~~~~~d~vi~~a~~   82 (287)
                      +  ++|+||.+...
T Consensus       647 ~--~~DaVIsalP~  658 (1042)
T PLN02819        647 S--QVDVVISLLPA  658 (1042)
T ss_pred             c--CCCEEEECCCc
Confidence            8  79999999765

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.03  E-value=0.15  Score=37.49  Aligned_cols=104  Identities=14%  Similarity=0.112  Sum_probs=62.0

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccC-------CCCC-------hhhhhhhcCCe--EEEEecCCChHHHH
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQL-------PGES-------DQEFAEFSSKI--LHLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~-------~~~~-------~~~~~~~~~~~--~~i~~D~~d~~~~~   65 (287)
                      |.|-+|..+++.|...|. ++++++.+.-......       ....       ...+.+..+.+  +.+..++.+. ...
T Consensus         6 G~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~~-~~~   84 (143)
T cd01483           6 GLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISED-NLD   84 (143)
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecChh-hHH
Confidence            468999999999999997 6888887643211100       0000       11222223333  3444444333 335


Q ss_pred             hhhhcCCccEEEecCCCCcccHHHHHHhCC-CCccEEEEecceeec
Q 023110           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~  110 (287)
                      ..++  ++|+||.+... ......+.++|+ ...++|..++.+.+|
T Consensus        85 ~~~~--~~diVi~~~d~-~~~~~~l~~~~~~~~i~~i~~~~~g~~g  127 (143)
T cd01483          85 DFLD--GVDLVIDAIDN-IAVRRALNRACKELGIPVIDAGGLGLGG  127 (143)
T ss_pred             HHhc--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEcCCCcEE
Confidence            6666  89999999865 444555667777 557888777765433

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.03  E-value=0.27  Score=38.53  Aligned_cols=105  Identities=17%  Similarity=0.133  Sum_probs=63.1

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccCC-------CC-------ChhhhhhhcCCeEE--EEecCCChHHHH
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP-------GE-------SDQEFAEFSSKILH--LKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~-------~~-------~~~~~~~~~~~~~~--i~~D~~d~~~~~   65 (287)
                      |.|-+|+.+++.|...|. ++++++.+.-+....-+       ..       ....+.+..+.+++  +...+ +.+.+.
T Consensus        28 G~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i-~~~~~~  106 (202)
T TIGR02356        28 GAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERV-TAENLE  106 (202)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcC-CHHHHH
Confidence            578999999999999996 88888887432110000       00       01122222334433  33333 345677


Q ss_pred             hhhhcCCccEEEecCCCCcccHHHHHHhCC-CCccEEEEecceeecc
Q 023110           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~  111 (287)
                      +.++  ++|+||.+... ......+-+.|. ..+++|+.++.+.+|.
T Consensus       107 ~~~~--~~D~Vi~~~d~-~~~r~~l~~~~~~~~ip~i~~~~~g~~G~  150 (202)
T TIGR02356       107 LLIN--NVDLVLDCTDN-FATRYLINDACVALGTPLISAAVVGFGGQ  150 (202)
T ss_pred             HHHh--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEEeccCeEE
Confidence            7887  89999998743 333333445565 5578998887666553

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=94.95  E-value=0.043  Score=46.11  Aligned_cols=29  Identities=31%  Similarity=0.484  Sum_probs=25.6

Q ss_pred             CCcccchHHHHHHHHHHcCC--eEEEEEcCC
Q 023110            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGK   29 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~--~V~~~~r~~   29 (287)
                      +|++|++|..++..|+..|+  +|++++|..
T Consensus         6 iGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           6 IGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            48899999999999999986  599999954

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=94.88  E-value=0.061  Score=38.34  Aligned_cols=95  Identities=16%  Similarity=0.138  Sum_probs=51.8

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeE-EEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      +|++|.+|+.+++.|.+. ++++.++..+.....+....        ...++. .+..++ +.+.+.  ..  ++|+||.
T Consensus         5 iG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~--------~~~~~~~~~~~~~-~~~~~~--~~--~~DvV~~   71 (122)
T smart00859        5 VGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSE--------AGPHLKGEVVLEL-EPEDFE--EL--AVDIVFL   71 (122)
T ss_pred             ECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHH--------HCccccccccccc-ccCChh--hc--CCCEEEE
Confidence            488999999999999995 88998884332211111110        011221 111222 222232  13  7899998


Q ss_pred             cCCCCccc--HHHHHHhCCCCccEEEEeccee
Q 023110           79 INGREADE--VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        79 ~a~~~~~~--~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +.+.....  ...+...+...+.+|-+||..-
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~g~~viD~s~~~~  103 (122)
T smart00859       72 ALPHGVSKEIAPLLPKAAEAGVKVIDLSSAFR  103 (122)
T ss_pred             cCCcHHHHHHHHHHHhhhcCCCEEEECCcccc
Confidence            87643211  1123333445578888887654

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=94.87  E-value=0.054  Score=39.43  Aligned_cols=66  Identities=17%  Similarity=0.182  Sum_probs=43.2

Q ss_pred             cccchHHHHHHHHHHcCCe-EEEEEcCCccccccCCCCChhhhhhh-cCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            3 GTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |+|.+|+.++..|...|.+ |+++.|+..+..+...        .. ...+.++.  +.   ++...+.  ++|+||++.
T Consensus        19 GaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~--------~~~~~~~~~~~--~~---~~~~~~~--~~DivI~aT   83 (135)
T PF01488_consen   19 GAGGAARAVAAALAALGAKEITIVNRTPERAEALAE--------EFGGVNIEAIP--LE---DLEEALQ--EADIVINAT   83 (135)
T ss_dssp             SSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHH--------HHTGCSEEEEE--GG---GHCHHHH--TESEEEE-S
T ss_pred             CCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHH--------HcCccccceee--HH---HHHHHHh--hCCeEEEec
Confidence            4588999999999999976 9999998766321111        00 12344433  32   3446666  899999997


Q ss_pred             CCC
Q 023110           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      +..
T Consensus        84 ~~~   86 (135)
T PF01488_consen   84 PSG   86 (135)
T ss_dssp             STT
T ss_pred             CCC
Confidence            654

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=94.87  E-value=0.056  Score=45.08  Aligned_cols=84  Identities=19%  Similarity=0.235  Sum_probs=53.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|++.+|++.... ...          ..+.+++     ..+.+.+.+.  ++|+||++...
T Consensus       159 G~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~-~~~----------~~G~~~~-----~~~~l~~~l~--~aDiVI~t~p~  220 (296)
T PRK08306        159 GFGRTGMTLARTLKALGANVTVGARKSAHLA-RIT----------EMGLSPF-----HLSELAEEVG--KIDIIFNTIPA  220 (296)
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHH----------HcCCeee-----cHHHHHHHhC--CCCEEEECCCh
Confidence            3588999999999999999999999865421 111          1233322     2245667777  89999998653


Q ss_pred             CcccHHHHHHhCCCCccEEEEec
Q 023110           83 EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      . .-....++.++...-+|-+++
T Consensus       221 ~-~i~~~~l~~~~~g~vIIDla~  242 (296)
T PRK08306        221 L-VLTKEVLSKMPPEALIIDLAS  242 (296)
T ss_pred             h-hhhHHHHHcCCCCcEEEEEcc
Confidence            2 223455555654345554554

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.85  E-value=0.045  Score=48.65  Aligned_cols=68  Identities=24%  Similarity=0.297  Sum_probs=46.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|+++ +|..+++.|+++|++|++.+++.....+...    ..+.  ..+++++.+|..+     ....  ++|+||+++
T Consensus        11 iG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~----~~l~--~~~~~~~~~~~~~-----~~~~--~~d~vv~~~   76 (450)
T PRK14106         11 VGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEAL----EELG--ELGIELVLGEYPE-----EFLE--GVDLVVVSP   76 (450)
T ss_pred             ECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHH----HHHH--hcCCEEEeCCcch-----hHhh--cCCEEEECC
Confidence            46666 9999999999999999999987532110000    0111  2367778887765     2334  799999998


Q ss_pred             CC
Q 023110           81 GR   82 (287)
Q Consensus        81 ~~   82 (287)
                      +.
T Consensus        77 g~   78 (450)
T PRK14106         77 GV   78 (450)
T ss_pred             CC
Confidence            86

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=94.84  E-value=0.61  Score=33.81  Aligned_cols=104  Identities=15%  Similarity=0.179  Sum_probs=64.4

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCC-------C-------ChhhhhhhcCC--eEEEEecCCChHHHH
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG-------E-------SDQEFAEFSSK--ILHLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~-------~-------~~~~~~~~~~~--~~~i~~D~~d~~~~~   65 (287)
                      |.|-+|+.+++.|...|. +++.++.+.-+....-+.       .       ....+.+..+.  ++.+..++ +.+.+.
T Consensus         9 G~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~-~~~~~~   87 (135)
T PF00899_consen    9 GAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI-DEENIE   87 (135)
T ss_dssp             STSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC-SHHHHH
T ss_pred             CcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc-cccccc
Confidence            678999999999999997 788888765332111111       0       01112222333  44555555 556678


Q ss_pred             hhhhcCCccEEEecCCCCcccHHHHHHhCC-CCccEEEEecceeec
Q 023110           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~  110 (287)
                      ++++  ++|+||.+... ......+.+.|. ..+++|+.++.+.+|
T Consensus        88 ~~~~--~~d~vi~~~d~-~~~~~~l~~~~~~~~~p~i~~~~~g~~G  130 (135)
T PF00899_consen   88 ELLK--DYDIVIDCVDS-LAARLLLNEICREYGIPFIDAGVNGFYG  130 (135)
T ss_dssp             HHHH--TSSEEEEESSS-HHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred             cccc--CCCEEEEecCC-HHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence            8887  89999998753 333444555666 556888888765554

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=94.80  E-value=0.19  Score=43.51  Aligned_cols=65  Identities=15%  Similarity=0.050  Sum_probs=50.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |+|..|..+++.+.+.|++|++++.++......+.           +  +.+..|..|.+.+.++.++.++|+|+...
T Consensus         6 G~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~a-----------d--~~~~~~~~d~~~l~~~~~~~~id~v~~~~   70 (380)
T TIGR01142         6 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-----------H--RSYVINMLDGDALRAVIEREKPDYIVPEI   70 (380)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhhhC-----------c--eEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence            46899999999999999999999998655322221           1  34567888999999999877899998654

This enzyme is an alternative to PurN (TIGR00639)

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=94.80  E-value=0.083  Score=44.96  Aligned_cols=91  Identities=14%  Similarity=0.184  Sum_probs=56.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh----HHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~----~~~~~~~~~~~~d~v   76 (287)
                      +||+|.+|..+++.+...|.+|++++++..+. +.+++         .-+++.+ .|..+.    +.+..... .++|+|
T Consensus       158 ~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~-~~~~~---------~lGa~~v-i~~~~~~~~~~~i~~~~~-~gvd~v  225 (338)
T cd08295         158 SAASGAVGQLVGQLAKLKGCYVVGSAGSDEKV-DLLKN---------KLGFDDA-FNYKEEPDLDAALKRYFP-NGIDIY  225 (338)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHH---------hcCCcee-EEcCCcccHHHHHHHhCC-CCcEEE
Confidence            48899999999999999999999998886552 11110         0122222 222111    22233222 479999


Q ss_pred             EecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +++.+.  ......++.++...+++.++.
T Consensus       226 ~d~~g~--~~~~~~~~~l~~~G~iv~~G~  252 (338)
T cd08295         226 FDNVGG--KMLDAVLLNMNLHGRIAACGM  252 (338)
T ss_pred             EECCCH--HHHHHHHHHhccCcEEEEecc
Confidence            999873  445667777775567876664

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR00518 alaDH alanine dehydrogenase

Probab=94.77  E-value=0.13  Score=44.31  Aligned_cols=90  Identities=9%  Similarity=0.038  Sum_probs=59.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|-+|...++.|...|.+|++++|+..... .+..        ...  ..+..+..+.+.+.+.+.  ++|+||+++..
T Consensus       174 GaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~-~l~~--------~~g--~~v~~~~~~~~~l~~~l~--~aDvVI~a~~~  240 (370)
T TIGR00518       174 GGGVVGTNAAKMANGLGATVTILDINIDRLR-QLDA--------EFG--GRIHTRYSNAYEIEDAVK--RADLLIGAVLI  240 (370)
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEECCHHHHH-HHHH--------hcC--ceeEeccCCHHHHHHHHc--cCCEEEEcccc
Confidence            4589999999999999999999999865421 1100        001  123344556777888887  89999998743


Q ss_pred             Cc-----ccHHHHHHhCCCCccEEEEec
Q 023110           83 EA-----DEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~-----~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ..     .-+...++.++....+|-++.
T Consensus       241 ~g~~~p~lit~~~l~~mk~g~vIvDva~  268 (370)
T TIGR00518       241 PGAKAPKLVSNSLVAQMKPGAVIVDVAI  268 (370)
T ss_pred             CCCCCCcCcCHHHHhcCCCCCEEEEEec
Confidence            21     124666676764456776664

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=94.72  E-value=0.13  Score=43.39  Aligned_cols=86  Identities=19%  Similarity=0.189  Sum_probs=59.2

Q ss_pred             ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCCC
Q 023110            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~~   83 (287)
                      .|-+|..-++.+...|.+|++++|+.++.....           .-+.+.+... .|++.+..+-+  .+|++|.+++  
T Consensus       175 ~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-----------~lGAd~~i~~-~~~~~~~~~~~--~~d~ii~tv~--  238 (339)
T COG1064         175 AGGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-----------KLGADHVINS-SDSDALEAVKE--IADAIIDTVG--  238 (339)
T ss_pred             CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-----------HhCCcEEEEc-CCchhhHHhHh--hCcEEEECCC--
Confidence            347888888888889999999999988732111           1233333322 26666666555  4999999998  


Q ss_pred             cccHHHHHHhCCCCccEEEEec
Q 023110           84 ADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        84 ~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      .....+.+++++...+++.++-
T Consensus       239 ~~~~~~~l~~l~~~G~~v~vG~  260 (339)
T COG1064         239 PATLEPSLKALRRGGTLVLVGL  260 (339)
T ss_pred             hhhHHHHHHHHhcCCEEEEECC
Confidence            6666777788875567776663

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=94.67  E-value=0.25  Score=41.71  Aligned_cols=92  Identities=12%  Similarity=0.194  Sum_probs=57.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHh---hhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS---SLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~---~~~~~~~d~vi   77 (287)
                      +||+|.+|..+++.+...|.+|++++++.++. +.+.+          -+++.+ .|..+.+.+.+   .....++|+|+
T Consensus       145 ~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~-~~~~~----------lGa~~v-i~~~~~~~~~~~~~~~~~~gvdvv~  212 (325)
T TIGR02825       145 NAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKV-AYLKK----------LGFDVA-FNYKTVKSLEETLKKASPDGYDCYF  212 (325)
T ss_pred             eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHH----------cCCCEE-EeccccccHHHHHHHhCCCCeEEEE
Confidence            48899999999999988999999998876552 11111          122221 12222212222   22223699999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEecc
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                      ++.|.  ......++.++...+++.++..
T Consensus       213 d~~G~--~~~~~~~~~l~~~G~iv~~G~~  239 (325)
T TIGR02825       213 DNVGG--EFSNTVIGQMKKFGRIAICGAI  239 (325)
T ss_pred             ECCCH--HHHHHHHHHhCcCcEEEEecch
Confidence            99874  3456677777755688866643

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=94.61  E-value=0.14  Score=44.38  Aligned_cols=61  Identities=18%  Similarity=0.152  Sum_probs=47.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |+|.+|+.++..+.+.|++|++++.++......+.             -+++.+|+.|.+.+.++.+  .+|+|..
T Consensus         9 G~Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~a-------------d~~~~~~~~D~~~l~~~a~--~~dvit~   69 (372)
T PRK06019          9 GGGQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVA-------------DEVIVADYDDVAALRELAE--QCDVITY   69 (372)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhC-------------ceEEecCCCCHHHHHHHHh--cCCEEEe
Confidence            45899999999999999999999987655322221             2356688999999999998  8898763

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=94.51  E-value=0.12  Score=37.13  Aligned_cols=95  Identities=19%  Similarity=0.185  Sum_probs=52.7

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccc--cccCCC-------CCh----hhhhhh----cCCeEEEEecCCCh
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI--AQQLPG-------ESD----QEFAEF----SSKILHLKGDRKDY   61 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~--~~~~~~-------~~~----~~~~~~----~~~~~~i~~D~~d~   61 (287)
                      +|+||-||+..++-+.+..  ++|++++-..+..  .++..+       ..+    ..+...    ..+++++.    ..
T Consensus         4 LGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~----G~   79 (129)
T PF02670_consen    4 LGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLS----GP   79 (129)
T ss_dssp             ESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEE----SH
T ss_pred             EcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEe----Ch
Confidence            5999999999999999986  8999988654431  111100       000    000000    11233322    35


Q ss_pred             HHHHhhhhcCCccEEEecCCCCcccHHHHHHhCCCCccE
Q 023110           62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQF  100 (287)
Q Consensus        62 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~~~~~~  100 (287)
                      +.+.++.+..++|+|++... -..+....+.+++..+++
T Consensus        80 ~~l~~~~~~~~~D~vv~Ai~-G~aGL~pt~~Ai~~gk~i  117 (129)
T PF02670_consen   80 EGLEELAEEPEVDIVVNAIV-GFAGLKPTLAAIKAGKDI  117 (129)
T ss_dssp             HHHHHHHTHTT-SEEEE--S-SGGGHHHHHHHHHTTSEE
T ss_pred             HHHHHHhcCCCCCEEEEeCc-ccchHHHHHHHHHCCCeE
Confidence            56677776678898888742 255666666666633333

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=94.45  E-value=0.0045  Score=47.75  Aligned_cols=29  Identities=28%  Similarity=0.449  Sum_probs=23.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.||+|-.++..|.+.|++|++++.++..
T Consensus         7 GlGyvGl~~A~~lA~~G~~V~g~D~~~~~   35 (185)
T PF03721_consen    7 GLGYVGLPLAAALAEKGHQVIGVDIDEEK   35 (185)
T ss_dssp             --STTHHHHHHHHHHTTSEEEEE-S-HHH
T ss_pred             CCCcchHHHHHHHHhCCCEEEEEeCChHH
Confidence            68999999999999999999999998875

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=94.41  E-value=0.13  Score=43.50  Aligned_cols=60  Identities=15%  Similarity=0.168  Sum_probs=49.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      |.|++|+-++......|++|++++-+++....++.             -..+..+.+|++.++++.+  ++|+|-
T Consensus         8 GGGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va-------------~~~i~~~~dD~~al~ela~--~~DViT   67 (375)
T COG0026           8 GGGQLGRMMALAAARLGIKVIVLDPDADAPAAQVA-------------DRVIVAAYDDPEALRELAA--KCDVIT   67 (375)
T ss_pred             cCcHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc-------------cceeecCCCCHHHHHHHHh--hCCEEE
Confidence            67999999999999999999999988777554442             1346677789999999998  899886

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=94.41  E-value=0.13  Score=42.36  Aligned_cols=92  Identities=22%  Similarity=0.255  Sum_probs=53.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCC----CChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-------
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG----ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-------   71 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-------   71 (287)
                      |.|-+|..++..|+++||+|++.+|++.+..+.+..    ..... .+.....+++..-+.|.+.+++++-..       
T Consensus         7 GLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~-~eaa~~aDvVitmv~~~~~V~~V~~g~~g~~~~~   85 (286)
T COG2084           7 GLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASP-AEAAAEADVVITMLPDDAAVRAVLFGENGLLEGL   85 (286)
T ss_pred             cCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCH-HHHHHhCCEEEEecCCHHHHHHHHhCccchhhcC
Confidence            578999999999999999999999998773222211    00000 111234445555555555555555310       


Q ss_pred             -CccEEEecCCCCcccHHHHHHhCC
Q 023110           72 -GFDVVYDINGREADEVEPILDALP   95 (287)
Q Consensus        72 -~~d~vi~~a~~~~~~~~~ll~~~~   95 (287)
                       .=.++|+++......++.+.+.++
T Consensus        86 ~~G~i~IDmSTisp~~a~~~a~~~~  110 (286)
T COG2084          86 KPGAIVIDMSTISPETARELAAALA  110 (286)
T ss_pred             CCCCEEEECCCCCHHHHHHHHHHHH
Confidence             122455555555555555555554

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=94.40  E-value=0.45  Score=38.56  Aligned_cols=76  Identities=18%  Similarity=0.075  Sum_probs=59.4

Q ss_pred             hHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCCCc-c
Q 023110            7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREA-D   85 (287)
Q Consensus         7 iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~-~   85 (287)
                      =|+.|++.|.+.|++|++.+-.....   ..          ...+..+.+-+.+.+.+.+++++.+++.||+...+-. .
T Consensus        13 egr~la~~L~~~g~~v~~Svat~~g~---~~----------~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~~   79 (248)
T PRK08057         13 EARALARALAAAGVDIVLSLAGRTGG---PA----------DLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYAAQ   79 (248)
T ss_pred             HHHHHHHHHHhCCCeEEEEEccCCCC---cc----------cCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccHHH
Confidence            47899999999999888876665432   11          2467788898889999999999999999999987644 4


Q ss_pred             cHHHHHHhCC
Q 023110           86 EVEPILDALP   95 (287)
Q Consensus        86 ~~~~ll~~~~   95 (287)
                      -+.++.++|+
T Consensus        80 is~~a~~ac~   89 (248)
T PRK08057         80 ISANAAAACR   89 (248)
T ss_pred             HHHHHHHHHH
Confidence            4667778877

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=94.35  E-value=0.21  Score=38.16  Aligned_cols=105  Identities=15%  Similarity=0.183  Sum_probs=61.7

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCcc---ccccC---CCC-------ChhhhhhhcCC--eEEEEecCCChHHHHh
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP---IAQQL---PGE-------SDQEFAEFSSK--ILHLKGDRKDYDFVKS   66 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~---~~~~~---~~~-------~~~~~~~~~~~--~~~i~~D~~d~~~~~~   66 (287)
                      |.|-+|+.+++.|...|. +++.++.+.-.   ...+.   .+.       ....+.+..+.  ++.+...+ +.+.+.+
T Consensus         6 G~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~-~~~~~~~   84 (174)
T cd01487           6 GAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKI-DENNLEG   84 (174)
T ss_pred             CcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeec-ChhhHHH
Confidence            568999999999999997 58888887521   11111   011       01122222333  34444444 3355777


Q ss_pred             hhhcCCccEEEecCCCCcccHHHHHHhCC-C-CccEEEEecceeecc
Q 023110           67 SLSAKGFDVVYDINGREADEVEPILDALP-N-LEQFIYCSSAGVYLK  111 (287)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~-~~~~i~~Ss~~v~~~  111 (287)
                      .++  ++|+||.+.. +...-..+.+.+. . ...+|+.+...-|+.
T Consensus        85 ~l~--~~DlVi~~~d-~~~~r~~i~~~~~~~~~ip~i~~~~~~~~~~  128 (174)
T cd01487          85 LFG--DCDIVVEAFD-NAETKAMLAESLLGNKNKPVVCASGMAGFGD  128 (174)
T ss_pred             Hhc--CCCEEEECCC-CHHHHHHHHHHHHHHCCCCEEEEehhhccCC
Confidence            888  8999999943 3333334555554 3 578887765554443

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PLN02494 adenosylhomocysteinase

Probab=94.33  E-value=0.2  Score=44.27  Aligned_cols=82  Identities=13%  Similarity=0.048  Sum_probs=55.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.+...|.+|+++.+++.......           ..++..+        .+.++++  ++|+||.+.+.
T Consensus       261 GyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-----------~~G~~vv--------~leEal~--~ADVVI~tTGt  319 (477)
T PLN02494        261 GYGDVGKGCAAAMKAAGARVIVTEIDPICALQAL-----------MEGYQVL--------TLEDVVS--EADIFVTTTGN  319 (477)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-----------hcCCeec--------cHHHHHh--hCCEEEECCCC
Confidence            6789999999999999999999988875422111           1234322        1345666  78999997764


Q ss_pred             CcccHHHHHHhCCCCccEEEEec
Q 023110           83 EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ...-....++.++....++.++.
T Consensus       320 ~~vI~~e~L~~MK~GAiLiNvGr  342 (477)
T PLN02494        320 KDIIMVDHMRKMKNNAIVCNIGH  342 (477)
T ss_pred             ccchHHHHHhcCCCCCEEEEcCC
Confidence            33334566777776667777764

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.24  E-value=0.18  Score=44.18  Aligned_cols=82  Identities=11%  Similarity=0.017  Sum_probs=52.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|++.++++.......           ..+++..     +   +.++++  ++|+||.+.+.
T Consensus       219 G~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-----------~~G~~v~-----~---l~eal~--~aDVVI~aTG~  277 (425)
T PRK05476        219 GYGDVGKGCAQRLRGLGARVIVTEVDPICALQAA-----------MDGFRVM-----T---MEEAAE--LGDIFVTATGN  277 (425)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-----------hcCCEec-----C---HHHHHh--CCCEEEECCCC
Confidence            4689999999999999999999998876522111           1233321     1   345566  89999998764


Q ss_pred             CcccHHHHHHhCCCCccEEEEec
Q 023110           83 EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ...-....++.++....++.++.
T Consensus       278 ~~vI~~~~~~~mK~GailiNvG~  300 (425)
T PRK05476        278 KDVITAEHMEAMKDGAILANIGH  300 (425)
T ss_pred             HHHHHHHHHhcCCCCCEEEEcCC
Confidence            22222245555664456665554

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=94.23  E-value=0.099  Score=48.25  Aligned_cols=79  Identities=13%  Similarity=0.239  Sum_probs=58.3

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d~vi~~a~   81 (287)
                      |-|.+|+.+++.|.++|+++++++++++... .++          ..+...+.||.++++.++++ ++  ++|.++-+.+
T Consensus       407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~-~~~----------~~g~~v~~GDat~~~~L~~agi~--~A~~vv~~~~  473 (601)
T PRK03659        407 GFGRFGQVIGRLLMANKMRITVLERDISAVN-LMR----------KYGYKVYYGDATQLELLRAAGAE--KAEAIVITCN  473 (601)
T ss_pred             cCchHHHHHHHHHHhCCCCEEEEECCHHHHH-HHH----------hCCCeEEEeeCCCHHHHHhcCCc--cCCEEEEEeC
Confidence            5789999999999999999999999987632 222          24788999999999988765 44  7888887765


Q ss_pred             CCcccHHHHHHhCC
Q 023110           82 READEVEPILDALP   95 (287)
Q Consensus        82 ~~~~~~~~ll~~~~   95 (287)
                      .. .....++..++
T Consensus       474 d~-~~n~~i~~~~r  486 (601)
T PRK03659        474 EP-EDTMKIVELCQ  486 (601)
T ss_pred             CH-HHHHHHHHHHH
Confidence            42 33333444444

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=94.23  E-value=0.19  Score=43.79  Aligned_cols=81  Identities=10%  Similarity=0.024  Sum_probs=54.2

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|..+++.+...|.+|+++++++.+.....           ..+++.+.        +.++++  ++|+||.++|.
T Consensus       209 G~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-----------~~G~~~~~--------~~e~v~--~aDVVI~atG~  267 (413)
T cd00401         209 GYGDVGKGCAQSLRGQGARVIVTEVDPICALQAA-----------MEGYEVMT--------MEEAVK--EGDIFVTTTGN  267 (413)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-----------hcCCEEcc--------HHHHHc--CCCEEEECCCC
Confidence            6799999999999999999999988866532111           12443321        124555  78999999875


Q ss_pred             CcccHHHHHHhCCCCccEEEEe
Q 023110           83 EADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      ...-....++.++....++.++
T Consensus       268 ~~~i~~~~l~~mk~GgilvnvG  289 (413)
T cd00401         268 KDIITGEHFEQMKDGAIVCNIG  289 (413)
T ss_pred             HHHHHHHHHhcCCCCcEEEEeC
Confidence            3322334566677556777776

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=94.22  E-value=0.18  Score=42.81  Aligned_cols=93  Identities=20%  Similarity=0.214  Sum_probs=57.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh---HHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~~~~~~~~~~~d~vi   77 (287)
                      +||+|-+|+..++.+...|+.+++.+.+..+.. .+++          .+...+ .|..+.   +.+.++....++|+|+
T Consensus       149 ~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~----------lGAd~v-i~y~~~~~~~~v~~~t~g~gvDvv~  216 (326)
T COG0604         149 HGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKE----------LGADHV-INYREEDFVEQVRELTGGKGVDVVL  216 (326)
T ss_pred             ecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHh----------cCCCEE-EcCCcccHHHHHHHHcCCCCceEEE
Confidence            589999999999999999977777777665532 2221          222221 123332   2334444434799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEecce
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~  107 (287)
                      +..|  .......+.+++...+++.+....
T Consensus       217 D~vG--~~~~~~~l~~l~~~G~lv~ig~~~  244 (326)
T COG0604         217 DTVG--GDTFAASLAALAPGGRLVSIGALS  244 (326)
T ss_pred             ECCC--HHHHHHHHHHhccCCEEEEEecCC
Confidence            9876  344445666666336777666533

>PRK06436 glycerate dehydrogenase; Provisional

Probab=94.18  E-value=0.21  Score=41.76  Aligned_cols=81  Identities=19%  Similarity=0.103  Sum_probs=52.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|++.+|+...                 .++...      ..++.++++  ++|+|+.+...
T Consensus       129 G~G~IG~~vA~~l~afG~~V~~~~r~~~~-----------------~~~~~~------~~~l~ell~--~aDiv~~~lp~  183 (303)
T PRK06436        129 GYGGIGRRVALLAKAFGMNIYAYTRSYVN-----------------DGISSI------YMEPEDIMK--KSDFVLISLPL  183 (303)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCcc-----------------cCcccc------cCCHHHHHh--hCCEEEECCCC
Confidence            57999999999888889999999987432                 111100      124667777  78988876543


Q ss_pred             Ccc--c--HHHHHHhCCCCccEEEEeccee
Q 023110           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~--~--~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +..  +  ....++.++...-||.+|...+
T Consensus       184 t~~T~~li~~~~l~~mk~ga~lIN~sRG~~  213 (303)
T PRK06436        184 TDETRGMINSKMLSLFRKGLAIINVARADV  213 (303)
T ss_pred             CchhhcCcCHHHHhcCCCCeEEEECCCccc
Confidence            221  1  2345566665567777776554

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=94.13  E-value=0.11  Score=43.54  Aligned_cols=29  Identities=24%  Similarity=0.410  Sum_probs=26.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|..+++.|.+.|++|.+.+|++..
T Consensus         7 GlG~mG~~la~~L~~~g~~V~~~dr~~~~   35 (298)
T TIGR00872         7 GLGRMGANIVRRLAKRGHDCVGYDHDQDA   35 (298)
T ss_pred             cchHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            47999999999999999999999998765

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=94.12  E-value=0.23  Score=42.42  Aligned_cols=29  Identities=21%  Similarity=0.384  Sum_probs=24.1

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCC
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGK   29 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~   29 (287)
                      +|++|++|++|++.|.+++ .+|..+..+.
T Consensus         6 vGatG~~G~~L~~~l~~~~~~~l~~v~~~~   35 (341)
T TIGR00978         6 LGATGLVGQKFVKLLAKHPYFELAKVVASP   35 (341)
T ss_pred             ECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence            5999999999999998876 5888885543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.11  E-value=0.048  Score=45.91  Aligned_cols=86  Identities=8%  Similarity=0.047  Sum_probs=47.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhc-CCe--EEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKI--LHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~--~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |+|.+|..++..|+..|++|++.++++.........+ ...+.... .+.  .-....+.-..++.++++  ++|.|+-+
T Consensus        14 GaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~--~aDlViEa   90 (321)
T PRK07066         14 GSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANV-ANAWPALERQGLAPGASPARLRFVATIEACVA--DADFIQES   90 (321)
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH-HHHHHHHHHcCCChhhHHhhceecCCHHHHhc--CCCEEEEC
Confidence            5799999999999999999999999876422110000 00000000 000  000011111224556777  89999998


Q ss_pred             CCCCcccHHHHH
Q 023110           80 NGREADEVEPIL   91 (287)
Q Consensus        80 a~~~~~~~~~ll   91 (287)
                      ..-+..--+.+.
T Consensus        91 vpE~l~vK~~lf  102 (321)
T PRK07066         91 APEREALKLELH  102 (321)
T ss_pred             CcCCHHHHHHHH
Confidence            765554433343

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.07  E-value=0.031  Score=46.43  Aligned_cols=29  Identities=17%  Similarity=0.313  Sum_probs=26.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |+|.+|..++..|...|++|++.++++..
T Consensus        10 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   38 (287)
T PRK08293         10 GAGVLGSQIAFQTAFHGFDVTIYDISDEA   38 (287)
T ss_pred             CCCHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            57999999999999999999999998764

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=93.97  E-value=0.17  Score=36.33  Aligned_cols=27  Identities=33%  Similarity=0.517  Sum_probs=23.5

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEE-cCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFT-RGK   29 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~-r~~   29 (287)
                      |+|.+|++|++.|.+.||+|.++. |+.
T Consensus        17 GaGrVG~~La~aL~~ag~~v~~v~srs~   44 (127)
T PF10727_consen   17 GAGRVGTALARALARAGHEVVGVYSRSP   44 (127)
T ss_dssp             CTSCCCCHHHHHHHHTTSEEEEESSCHH
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEEeCCc
Confidence            569999999999999999999975 444

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=93.95  E-value=0.52  Score=37.74  Aligned_cols=104  Identities=14%  Similarity=0.136  Sum_probs=61.9

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccCC-------CCC-------hhhhhhhcC--CeEEEEecCCChHHHH
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP-------GES-------DQEFAEFSS--KILHLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~-------~~~-------~~~~~~~~~--~~~~i~~D~~d~~~~~   65 (287)
                      |.|-+|+++++.|...|. ++++++.+.-.....-+       +..       ...+.+..+  +++.+..++ +.+.+.
T Consensus        28 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i-~~~~~~  106 (228)
T cd00757          28 GAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERL-DAENAE  106 (228)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEeccee-CHHHHH
Confidence            578999999999999986 67777655322110000       011       111222223  344454444 345677


Q ss_pred             hhhhcCCccEEEecCCCCcccHHHHHHhCC-CCccEEEEecceeec
Q 023110           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~  110 (287)
                      +.++  ++|+||.+... ...-..+-++|. ...++|+.+..+.+|
T Consensus       107 ~~~~--~~DvVi~~~d~-~~~r~~l~~~~~~~~ip~i~~g~~g~~g  149 (228)
T cd00757         107 ELIA--GYDLVLDCTDN-FATRYLINDACVKLGKPLVSGAVLGFEG  149 (228)
T ss_pred             HHHh--CCCEEEEcCCC-HHHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            7887  89999999763 333334555565 557888887666554

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=93.88  E-value=0.17  Score=42.15  Aligned_cols=75  Identities=15%  Similarity=0.073  Sum_probs=47.4

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      .|||||+|..|++.|..+. .++..++.+...                         +..+   ..++++  ++|+||.+
T Consensus         7 vGasGy~G~el~rlL~~HP~~el~~l~s~~~~-------------------------~~~~---~~~~~~--~~D~vFla   56 (310)
T TIGR01851         7 DGEAGTTGLQIRERLSGRDDIELLSIAPDRRK-------------------------DAAE---RAKLLN--AADVAILC   56 (310)
T ss_pred             ECCCChhHHHHHHHHhCCCCeEEEEEeccccc-------------------------CcCC---HhHhhc--CCCEEEEC
Confidence            4999999999999999984 456555433210                         0112   234445  78999887


Q ss_pred             CCCCcccHHHHHHhCC-CCccEEEEecce
Q 023110           80 NGREADEVEPILDALP-NLEQFIYCSSAG  107 (287)
Q Consensus        80 a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~  107 (287)
                      ..  ......++..+. ...++|=+|+..
T Consensus        57 lp--~~~s~~~~~~~~~~g~~VIDlSadf   83 (310)
T TIGR01851        57 LP--DDAAREAVSLVDNPNTCIIDASTAY   83 (310)
T ss_pred             CC--HHHHHHHHHHHHhCCCEEEECChHH
Confidence            74  334444555443 445788888765

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=93.86  E-value=0.11  Score=43.75  Aligned_cols=29  Identities=17%  Similarity=0.090  Sum_probs=24.8

Q ss_pred             CCcccchHHHHHHHHHHcCC-------eEEEEEcCC
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGK   29 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-------~V~~~~r~~   29 (287)
                      +|++|.+|++++..|+..+.       +++.++...
T Consensus         9 IGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~   44 (323)
T TIGR01759         9 TGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPP   44 (323)
T ss_pred             ECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCC
Confidence            48889999999999998873       788998864

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=93.79  E-value=0.24  Score=42.88  Aligned_cols=29  Identities=24%  Similarity=0.558  Sum_probs=26.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK   29 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~   29 (287)
                      .||.|.+|+++++.|.+.|++|++.+|+.
T Consensus       104 iGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199        104 VGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             EcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            37899999999999999999999999864

>PRK08655 prephenate dehydrogenase; Provisional

Probab=93.79  E-value=0.14  Score=45.35  Aligned_cols=31  Identities=29%  Similarity=0.544  Sum_probs=27.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      .||+|.+|+++++.|.+.|++|++.+|++..
T Consensus         6 IGG~G~mG~slA~~L~~~G~~V~v~~r~~~~   36 (437)
T PRK08655          6 IGGTGGLGKWFARFLKEKGFEVIVTGRDPKK   36 (437)
T ss_pred             EecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence            3789999999999999999999999998654

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=93.79  E-value=0.26  Score=43.54  Aligned_cols=82  Identities=11%  Similarity=-0.021  Sum_probs=53.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|++..+++.......           ..+++..        .+.++++  .+|+|+.+.+.
T Consensus       261 G~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-----------~~G~~~~--------~leell~--~ADIVI~atGt  319 (476)
T PTZ00075        261 GYGDVGKGCAQALRGFGARVVVTEIDPICALQAA-----------MEGYQVV--------TLEDVVE--TADIFVTATGN  319 (476)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-----------hcCceec--------cHHHHHh--cCCEEEECCCc
Confidence            4688999999999999999999988765421111           1233321        2456677  89999988763


Q ss_pred             CcccHHHHHHhCCCCccEEEEec
Q 023110           83 EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ...-....++.++....++.++-
T Consensus       320 ~~iI~~e~~~~MKpGAiLINvGr  342 (476)
T PTZ00075        320 KDIITLEHMRRMKNNAIVGNIGH  342 (476)
T ss_pred             ccccCHHHHhccCCCcEEEEcCC
Confidence            22223456666765566766653

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=93.76  E-value=0.34  Score=40.87  Aligned_cols=91  Identities=15%  Similarity=0.242  Sum_probs=57.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh---HHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~~~~~~~~~~~d~vi   77 (287)
                      +||+|-+|..+++.+...|.+|++++++..+. +.+++          -+++.+ .|..+.   +.+..... .++|+|+
T Consensus       150 ~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~-~~l~~----------~Ga~~v-i~~~~~~~~~~v~~~~~-~gvd~vl  216 (329)
T cd08294         150 NGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKV-AWLKE----------LGFDAV-FNYKTVSLEEALKEAAP-DGIDCYF  216 (329)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHH----------cCCCEE-EeCCCccHHHHHHHHCC-CCcEEEE
Confidence            48999999999999999999999998876552 11111          122222 222222   22333222 4799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEecc
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                      ++.+.  ......++.++...+++.+++.
T Consensus       217 d~~g~--~~~~~~~~~l~~~G~iv~~g~~  243 (329)
T cd08294         217 DNVGG--EFSSTVLSHMNDFGRVAVCGSI  243 (329)
T ss_pred             ECCCH--HHHHHHHHhhccCCEEEEEcch
Confidence            99874  4455666777644678777643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=93.72  E-value=0.05  Score=40.53  Aligned_cols=67  Identities=12%  Similarity=0.049  Sum_probs=41.5

Q ss_pred             CcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |+ |.+|+++++.|.+.| ++|++.+|+.....+....          -+...+..+..+.   .+.++  ++|+||.+.
T Consensus        26 G~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~----------~~~~~~~~~~~~~---~~~~~--~~Dvvi~~~   89 (155)
T cd01065          26 GA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAER----------FGELGIAIAYLDL---EELLA--EADLIINTT   89 (155)
T ss_pred             CC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHH----------Hhhcccceeecch---hhccc--cCCEEEeCc
Confidence            54 899999999999985 7899999986653211110          0111111223332   33355  899999997


Q ss_pred             CCCc
Q 023110           81 GREA   84 (287)
Q Consensus        81 ~~~~   84 (287)
                      ....
T Consensus        90 ~~~~   93 (155)
T cd01065          90 PVGM   93 (155)
T ss_pred             CCCC
Confidence            6543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=93.70  E-value=1.1  Score=35.00  Aligned_cols=97  Identities=14%  Similarity=0.194  Sum_probs=56.1

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcC---CccccccC---CCCC-------hhhhhhhcC--CeEEEEecCCChHHHHh
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRG---KAPIAQQL---PGES-------DQEFAEFSS--KILHLKGDRKDYDFVKS   66 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~---~~~~~~~~---~~~~-------~~~~~~~~~--~~~~i~~D~~d~~~~~~   66 (287)
                      |.|-+|+.++..|...|. +|+.++++   .+....+.   ....       ...+....+  .++.+..++ +.+.+.+
T Consensus        28 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~i-~~~~~~~  106 (200)
T TIGR02354        28 GLGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEKI-TEENIDK  106 (200)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeeeC-CHhHHHH
Confidence            468899999999999998 69999988   33322111   1111       111122223  344455555 3456777


Q ss_pred             hhhcCCccEEEecCCCCcccHHH-HHHhCC---CCccEEEEe
Q 023110           67 SLSAKGFDVVYDINGREADEVEP-ILDALP---NLEQFIYCS  104 (287)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~-ll~~~~---~~~~~i~~S  104 (287)
                      +++  ++|+||.+.  ....++. +.+.+.   +...++..|
T Consensus       107 ~~~--~~DlVi~a~--Dn~~~k~~l~~~~~~~~~~~~ii~~~  144 (200)
T TIGR02354       107 FFK--DADIVCEAF--DNAEAKAMLVNAVLEKYKDKYLIAAS  144 (200)
T ss_pred             Hhc--CCCEEEECC--CCHHHHHHHHHHHHHHcCCCcEEEEe
Confidence            887  899999993  2333443 344443   344445543

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=93.69  E-value=0.19  Score=42.32  Aligned_cols=89  Identities=19%  Similarity=0.225  Sum_probs=54.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhh-cCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-AKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-~~~~d~vi~~   79 (287)
                      +||+|.+|..+++.+...|.+|++++++.... +.+..          .+...+ .+..+   +.+.+. ..++|.|+++
T Consensus       169 ~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~----------~~~~~~-~~~~~---~~~~~~~~~~~d~v~~~  233 (332)
T cd08259         169 TGAGGGVGIHAIQLAKALGARVIAVTRSPEKL-KILKE----------LGADYV-IDGSK---FSEDVKKLGGADVVIEL  233 (332)
T ss_pred             ECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHH-HHHHH----------cCCcEE-EecHH---HHHHHHhccCCCEEEEC
Confidence            48999999999999999999999999876542 11110          111111 12211   222221 1279999999


Q ss_pred             CCCCcccHHHHHHhCCCCccEEEEecc
Q 023110           80 NGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        80 a~~~~~~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                      ++..  .....++.+....++|.++..
T Consensus       234 ~g~~--~~~~~~~~~~~~g~~v~~g~~  258 (332)
T cd08259         234 VGSP--TIEESLRSLNKGGRLVLIGNV  258 (332)
T ss_pred             CChH--HHHHHHHHhhcCCEEEEEcCC
Confidence            8743  355566666644578777653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=93.66  E-value=1  Score=36.32  Aligned_cols=105  Identities=11%  Similarity=0.084  Sum_probs=62.0

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccCC-------CCC-------hhhhhhhcCCeEEEEecC-CChHHHHh
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP-------GES-------DQEFAEFSSKILHLKGDR-KDYDFVKS   66 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~-------~~~-------~~~~~~~~~~~~~i~~D~-~d~~~~~~   66 (287)
                      |.|-+|+.++..|...|. +++.++.+.-.....-+       +..       ...+.+..+.+++...+- .+.+.+.+
T Consensus        31 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i~~~~~~~  110 (240)
T TIGR02355        31 GLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKLDDAELAA  110 (240)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccCCHHHHHH
Confidence            678999999999999984 67777776533111111       111       112223334444333322 24456777


Q ss_pred             hhhcCCccEEEecCCCCcccHHHHHHhCC-CCccEEEEecceeec
Q 023110           67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~  110 (287)
                      +++  ++|+||.+... ......+-++|. ...++|+.++.+.+|
T Consensus       111 ~~~--~~DlVvd~~D~-~~~r~~ln~~~~~~~ip~v~~~~~g~~G  152 (240)
T TIGR02355       111 LIA--EHDIVVDCTDN-VEVRNQLNRQCFAAKVPLVSGAAIRMEG  152 (240)
T ss_pred             Hhh--cCCEEEEcCCC-HHHHHHHHHHHHHcCCCEEEEEecccEe
Confidence            888  89999998753 232333445555 667888877665554

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=93.66  E-value=0.077  Score=46.57  Aligned_cols=30  Identities=17%  Similarity=0.241  Sum_probs=27.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~   32 (287)
                      |.|++|..++..|.+.|++|+++++++...
T Consensus        10 GlG~~G~~~A~~La~~G~~V~~~D~~~~~v   39 (415)
T PRK11064         10 GLGYIGLPTAAAFASRQKQVIGVDINQHAV   39 (415)
T ss_pred             CcchhhHHHHHHHHhCCCEEEEEeCCHHHH
Confidence            679999999999999999999999988764

>TIGR00936 ahcY adenosylhomocysteinase

Probab=93.64  E-value=0.27  Score=42.79  Aligned_cols=82  Identities=7%  Similarity=-0.008  Sum_probs=53.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.+...|.+|+++++++.......           ..++...  +      +.++++  ++|+||.+.+.
T Consensus       202 G~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-----------~~G~~v~--~------leeal~--~aDVVItaTG~  260 (406)
T TIGR00936       202 GYGWCGKGIAMRARGMGARVIVTEVDPIRALEAA-----------MDGFRVM--T------MEEAAK--IGDIFITATGN  260 (406)
T ss_pred             CCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-----------hcCCEeC--C------HHHHHh--cCCEEEECCCC
Confidence            6799999999999999999999998875521111           1234322  1      233556  78999998764


Q ss_pred             CcccHHHHHHhCCCCccEEEEec
Q 023110           83 EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ...-....+..++....+++++.
T Consensus       261 ~~vI~~~~~~~mK~GailiN~G~  283 (406)
T TIGR00936       261 KDVIRGEHFENMKDGAIVANIGH  283 (406)
T ss_pred             HHHHHHHHHhcCCCCcEEEEECC
Confidence            22222335555665567776664

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK13243 glyoxylate reductase; Reviewed

Probab=93.63  E-value=0.18  Score=42.86  Aligned_cols=83  Identities=18%  Similarity=0.117  Sum_probs=53.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|++.+|+.....  ..          ..++.        ..++.++++  ++|+|+.+...
T Consensus       157 G~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~----------~~~~~--------~~~l~ell~--~aDiV~l~lP~  214 (333)
T PRK13243        157 GFGRIGQAVARRAKGFGMRILYYSRTRKPEA--EK----------ELGAE--------YRPLEELLR--ESDFVSLHVPL  214 (333)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCChhh--HH----------HcCCE--------ecCHHHHHh--hCCEEEEeCCC
Confidence            5799999999999999999999998754310  00          01111        124667777  88988877643


Q ss_pred             CcccHH-----HHHHhCCCCccEEEEeccee
Q 023110           83 EADEVE-----PILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~~~~-----~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      + ..+.     ..++.++...-+|.+|...+
T Consensus       215 t-~~T~~~i~~~~~~~mk~ga~lIN~aRg~~  244 (333)
T PRK13243        215 T-KETYHMINEERLKLMKPTAILVNTARGKV  244 (333)
T ss_pred             C-hHHhhccCHHHHhcCCCCeEEEECcCchh
Confidence            2 2233     34555665567777776654

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=93.58  E-value=0.06  Score=44.11  Aligned_cols=73  Identities=14%  Similarity=0.077  Sum_probs=44.2

Q ss_pred             CCcccchHHHHHHHHHHcC----CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      .||+|.+|..++..|+..|    .+|+.++.++........+     +.......  ....+.-.+++.+.++  ++|+|
T Consensus         4 IGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~d-----l~~~~~~~--~~~~i~~~~d~~~~~~--~aDiV   74 (263)
T cd00650           4 IGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMD-----LQDAVEPL--ADIKVSITDDPYEAFK--DADVV   74 (263)
T ss_pred             ECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHH-----HHHhhhhc--cCcEEEECCchHHHhC--CCCEE
Confidence            4888999999999999988    7999999887553211110     00000000  0111111223455566  99999


Q ss_pred             EecCCC
Q 023110           77 YDINGR   82 (287)
Q Consensus        77 i~~a~~   82 (287)
                      |.+++.
T Consensus        75 v~t~~~   80 (263)
T cd00650          75 IITAGV   80 (263)
T ss_pred             EECCCC
Confidence            998876

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=93.56  E-value=0.072  Score=41.45  Aligned_cols=31  Identities=32%  Similarity=0.344  Sum_probs=27.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      .||+|.+|..|+++|.+.||+|+.-+|+.++
T Consensus         6 i~GtGniG~alA~~~a~ag~eV~igs~r~~~   36 (211)
T COG2085           6 IIGTGNIGSALALRLAKAGHEVIIGSSRGPK   36 (211)
T ss_pred             EeccChHHHHHHHHHHhCCCeEEEecCCChh
Confidence            4899999999999999999999999777665

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=93.45  E-value=0.13  Score=43.57  Aligned_cols=90  Identities=14%  Similarity=0.080  Sum_probs=49.9

Q ss_pred             CCcccchHHHHHHHHHHcC---CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      .||||++|+.|++.|.++.   .++..+....+. -+.+.          ..+.....-++. .    ..+.  ++|+||
T Consensus        10 vGATG~vG~ellrlL~~~~hP~~~l~~laS~~sa-G~~~~----------~~~~~~~v~~~~-~----~~~~--~~Dvvf   71 (336)
T PRK08040         10 LGATGAVGEALLELLAERQFPVGELYALASEESA-GETLR----------FGGKSVTVQDAA-E----FDWS--QAQLAF   71 (336)
T ss_pred             EccCCHHHHHHHHHHhcCCCCceEEEEEEccCcC-CceEE----------ECCcceEEEeCc-h----hhcc--CCCEEE
Confidence            4999999999999999853   466666544222 11111          001111111221 1    1224  789999


Q ss_pred             ecCCCCcccHHHHHHhC-CCCccEEEEecceeec
Q 023110           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGVYL  110 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~-~~~~~~i~~Ss~~v~~  110 (287)
                      .+++.  .....++..+ +...++|=.|+..-+.
T Consensus        72 ~a~p~--~~s~~~~~~~~~~g~~VIDlS~~fRl~  103 (336)
T PRK08040         72 FVAGR--EASAAYAEEATNAGCLVIDSSGLFALE  103 (336)
T ss_pred             ECCCH--HHHHHHHHHHHHCCCEEEECChHhcCC
Confidence            98753  3444455543 3445788888766443

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=93.44  E-value=0.3  Score=40.65  Aligned_cols=29  Identities=28%  Similarity=0.334  Sum_probs=26.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|..+++.|++.|++|++.+|+++.
T Consensus         3 GlG~mG~~mA~~L~~~G~~V~v~dr~~~~   31 (288)
T TIGR01692         3 GLGNMGGPMAANLLKAGHPVRVFDLFPDA   31 (288)
T ss_pred             cccHhHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            68999999999999999999999998765

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=93.40  E-value=0.16  Score=42.66  Aligned_cols=71  Identities=18%  Similarity=0.219  Sum_probs=42.6

Q ss_pred             cccchHHHHHHHHHHcC--CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            3 GTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |+|.+|+.++..|+..|  ++|++++++.........++.+.... ......+..   .+.+    .++  ++|+||.++
T Consensus         7 GaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~-~~~~~~i~~---~~~~----~l~--~aDIVIita   76 (306)
T cd05291           7 GAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAF-LPSPVKIKA---GDYS----DCK--DADIVVITA   76 (306)
T ss_pred             CCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhc-cCCCeEEEc---CCHH----HhC--CCCEEEEcc
Confidence            36999999999999998  68999999876632221111000000 011222221   2222    245  899999999


Q ss_pred             CCC
Q 023110           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      |..
T Consensus        77 g~~   79 (306)
T cd05291          77 GAP   79 (306)
T ss_pred             CCC
Confidence            874

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=93.37  E-value=1  Score=35.62  Aligned_cols=104  Identities=13%  Similarity=0.174  Sum_probs=61.1

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCcc---cccc-C--CCCC-------hhhhhhhcCC--eEEEEecCCChHHHHh
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP---IAQQ-L--PGES-------DQEFAEFSSK--ILHLKGDRKDYDFVKS   66 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~---~~~~-~--~~~~-------~~~~~~~~~~--~~~i~~D~~d~~~~~~   66 (287)
                      |.|-+|+.+++.|...|. +++.++.+.-.   ...+ +  .+..       ...+.+..+.  ++.+...+. .+.+.+
T Consensus        35 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~-~~~~~~  113 (212)
T PRK08644         35 GAGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKID-EDNIEE  113 (212)
T ss_pred             CcCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeecC-HHHHHH
Confidence            578999999999999986 58888877322   1101 0  0000       1112222233  344444443 345667


Q ss_pred             hhhcCCccEEEecCCCCcccHHHHHHhCC-C-CccEEEEecceeec
Q 023110           67 SLSAKGFDVVYDINGREADEVEPILDALP-N-LEQFIYCSSAGVYL  110 (287)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~-~~~~i~~Ss~~v~~  110 (287)
                      .++  ++|+||.+.. +......+.+.|. . ..++|+.+...-|+
T Consensus       114 ~~~--~~DvVI~a~D-~~~~r~~l~~~~~~~~~~p~I~~~~~~~~~  156 (212)
T PRK08644        114 LFK--DCDIVVEAFD-NAETKAMLVETVLEHPGKKLVAASGMAGYG  156 (212)
T ss_pred             HHc--CCCEEEECCC-CHHHHHHHHHHHHHhCCCCEEEeehhhccC
Confidence            787  8999999853 3333344556665 4 67888877655544

>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway

Probab=93.32  E-value=0.049  Score=38.54  Aligned_cols=87  Identities=15%  Similarity=0.057  Sum_probs=44.8

Q ss_pred             cccchHHHHHHHHHHc----CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            3 GTRFIGVFLSRLLVKE----GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~l~~~----g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |.|.||+.++++|.+.    +.+|.++..+........       ... .....       -..++.++++..++|+||.
T Consensus         1 G~G~VG~~l~~~l~~~~~~~~~~v~~v~~~~~~~~~~~-------~~~-~~~~~-------~~~~~~~~~~~~~~dvvVE   65 (117)
T PF03447_consen    1 GFGNVGRGLLEQLKEQQERIDLEVVGVADRSMLISKDW-------AAS-FPDEA-------FTTDLEELIDDPDIDVVVE   65 (117)
T ss_dssp             --SHHHHHHHHHHHHTHHHCEEEEEEEEESSEEEETTH-------HHH-HTHSC-------EESSHHHHHTHTT-SEEEE
T ss_pred             CCCHHHHHHHHHHHhCcccCCEEEEEEEECCchhhhhh-------hhh-ccccc-------ccCCHHHHhcCcCCCEEEE
Confidence            5799999999999986    567777765552111000       000 01111       1122344444347999999


Q ss_pred             cCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           79 INGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      |++. ......+.++++..+++|-.|-
T Consensus        66 ~t~~-~~~~~~~~~~L~~G~~VVt~nk   91 (117)
T PF03447_consen   66 CTSS-EAVAEYYEKALERGKHVVTANK   91 (117)
T ss_dssp             -SSC-HHHHHHHHHHHHTTCEEEES-H
T ss_pred             CCCc-hHHHHHHHHHHHCCCeEEEECH
Confidence            9653 2223334455556678876554

Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D ....

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=93.32  E-value=0.77  Score=38.73  Aligned_cols=90  Identities=19%  Similarity=0.188  Sum_probs=56.0

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh---HHHHhhhhcCCccEEEe
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~~~~~~~~~~~d~vi~   78 (287)
                      ||+|.+|..+++.+...|.+|++++++..+.. .+++          -+++.+ .|..+.   +.+.+.....++|+||+
T Consensus       151 ~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~-~~~~----------~g~~~~-i~~~~~~~~~~v~~~~~~~~~d~vid  218 (324)
T cd08291         151 AAASALGRMLVRLCKADGIKVINIVRRKEQVD-LLKK----------IGAEYV-LNSSDPDFLEDLKELIAKLNATIFFD  218 (324)
T ss_pred             cCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHH----------cCCcEE-EECCCccHHHHHHHHhCCCCCcEEEE
Confidence            78999999999988888999999988765521 1111          122221 122222   23344443347999999


Q ss_pred             cCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           79 INGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +.+.  ......++.++...+++.++.
T Consensus       219 ~~g~--~~~~~~~~~l~~~G~~v~~g~  243 (324)
T cd08291         219 AVGG--GLTGQILLAMPYGSTLYVYGY  243 (324)
T ss_pred             CCCc--HHHHHHHHhhCCCCEEEEEEe
Confidence            9874  334555666664457776664

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PLN02928 oxidoreductase family protein

Probab=93.31  E-value=0.35  Score=41.37  Aligned_cols=96  Identities=14%  Similarity=0.084  Sum_probs=54.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-||+.+++.|...|.+|++.+|+...........     .  ...+.-+........++.++++  ++|+|+.+...
T Consensus       166 G~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~L~ell~--~aDiVvl~lPl  236 (347)
T PLN02928        166 GYGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLI-----P--NGDVDDLVDEKGGHEDIYEFAG--EADIVVLCCTL  236 (347)
T ss_pred             CCCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhcc-----c--cccccccccccCcccCHHHHHh--hCCEEEECCCC
Confidence            6799999999999999999999988743211000000     0  0000000001113456888888  89998877654


Q ss_pred             CcccHHH-----HHHhCCCCccEEEEeccee
Q 023110           83 EADEVEP-----ILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~~~~~-----ll~~~~~~~~~i~~Ss~~v  108 (287)
                      + ..+..     .+..|+...-||.++=..+
T Consensus       237 t-~~T~~li~~~~l~~Mk~ga~lINvaRG~l  266 (347)
T PLN02928        237 T-KETAGIVNDEFLSSMKKGALLVNIARGGL  266 (347)
T ss_pred             C-hHhhcccCHHHHhcCCCCeEEEECCCccc
Confidence            3 23333     4444554456666664433

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.29  E-value=0.046  Score=45.46  Aligned_cols=30  Identities=20%  Similarity=0.325  Sum_probs=27.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~   32 (287)
                      |.|.+|..++..|.+.|++|+++++++...
T Consensus         8 G~G~mG~~iA~~la~~G~~V~~~d~~~~~~   37 (288)
T PRK09260          8 GAGVMGRGIAYVFAVSGFQTTLVDIKQEQL   37 (288)
T ss_pred             CccHHHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence            569999999999999999999999987663

>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein

Probab=93.28  E-value=0.26  Score=42.30  Aligned_cols=61  Identities=16%  Similarity=0.094  Sum_probs=46.5

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |+|.+|+.+++.+.+.|++|++++.++......+.           +  +.+.++..|.+.+.++.+  .+|+|..
T Consensus         6 G~gql~~~l~~aa~~lG~~v~~~d~~~~~p~~~~a-----------d--~~~~~~~~d~~~i~~~a~--~~dvit~   66 (352)
T TIGR01161         6 GGGQLGRMLALAARPLGIKVHVLDPDANSPAVQVA-----------D--HVVLAPFFDPAAIRELAE--SCDVITF   66 (352)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEECCCCCCChhHhC-----------c--eeEeCCCCCHHHHHHHHh--hCCEEEe
Confidence            45899999999999999999999987655332221           1  245778899999999888  7887643

Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.

>PRK10537 voltage-gated potassium channel; Provisional

Probab=93.24  E-value=0.47  Score=41.26  Aligned_cols=66  Identities=15%  Similarity=0.159  Sum_probs=49.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.++++|.++|++|++++.+..  ....           ..+..++.+|.+|++.++++=- .+++.|+-+...
T Consensus       247 G~g~lg~~v~~~L~~~g~~vvVId~d~~--~~~~-----------~~g~~vI~GD~td~e~L~~AgI-~~A~aVI~~t~d  312 (393)
T PRK10537        247 GHSPLAINTYLGLRQRGQAVTVIVPLGL--EHRL-----------PDDADLIPGDSSDSAVLKKAGA-ARARAILALRDN  312 (393)
T ss_pred             CCChHHHHHHHHHHHCCCCEEEEECchh--hhhc-----------cCCCcEEEeCCCCHHHHHhcCc-ccCCEEEEcCCC
Confidence            4678999999999999999999886522  1111           2567899999999988876532 278888876643

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=93.12  E-value=0.34  Score=34.70  Aligned_cols=86  Identities=19%  Similarity=0.264  Sum_probs=54.9

Q ss_pred             hHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC---hHHHHhhhhcCCccEEEecCCCC
Q 023110            7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVYDINGRE   83 (287)
Q Consensus         7 iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d---~~~~~~~~~~~~~d~vi~~a~~~   83 (287)
                      ||...++.+...|.+|+++++++.+. +.++          .-++..+ .|..+   .+.+.++....++|+||.|.|. 
T Consensus         2 vG~~a~q~ak~~G~~vi~~~~~~~k~-~~~~----------~~Ga~~~-~~~~~~~~~~~i~~~~~~~~~d~vid~~g~-   68 (130)
T PF00107_consen    2 VGLMAIQLAKAMGAKVIATDRSEEKL-ELAK----------ELGADHV-IDYSDDDFVEQIRELTGGRGVDVVIDCVGS-   68 (130)
T ss_dssp             HHHHHHHHHHHTTSEEEEEESSHHHH-HHHH----------HTTESEE-EETTTSSHHHHHHHHTTTSSEEEEEESSSS-
T ss_pred             hHHHHHHHHHHcCCEEEEEECCHHHH-HHHH----------hhccccc-ccccccccccccccccccccceEEEEecCc-
Confidence            68888999989999999999987663 2221          1233333 33333   3445555543479999999983 


Q ss_pred             cccHHHHHHhCCCCccEEEEec
Q 023110           84 ADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        84 ~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      .......++.++...+++.++.
T Consensus        69 ~~~~~~~~~~l~~~G~~v~vg~   90 (130)
T PF00107_consen   69 GDTLQEAIKLLRPGGRIVVVGV   90 (130)
T ss_dssp             HHHHHHHHHHEEEEEEEEEESS
T ss_pred             HHHHHHHHHHhccCCEEEEEEc
Confidence            3445556666664457766654

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=93.07  E-value=0.46  Score=39.93  Aligned_cols=92  Identities=23%  Similarity=0.215  Sum_probs=58.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh-HHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~-~~~~~~~~~~~~d~vi~~   79 (287)
                      .|++|.+|..+++.+...|.+|++++++..... .+++          -++..+ .|..+. ..+.......++|.|+++
T Consensus       153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~----------~g~~~~-~~~~~~~~~~~~~~~~~~~d~vi~~  220 (325)
T cd05280         153 TGATGGVGSIAVAILAKLGYTVVALTGKEEQAD-YLKS----------LGASEV-LDREDLLDESKKPLLKARWAGAIDT  220 (325)
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHh----------cCCcEE-EcchhHHHHHHHHhcCCCccEEEEC
Confidence            378999999999999999999999998865521 1111          122222 122222 123333333468999999


Q ss_pred             CCCCcccHHHHHHhCCCCccEEEEecc
Q 023110           80 NGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        80 a~~~~~~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                      .+.  ......++.+....+++.++..
T Consensus       221 ~~~--~~~~~~~~~l~~~g~~v~~g~~  245 (325)
T cd05280         221 VGG--DVLANLLKQTKYGGVVASCGNA  245 (325)
T ss_pred             Cch--HHHHHHHHhhcCCCEEEEEecC
Confidence            774  3566667777655678877653

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=93.06  E-value=0.23  Score=41.57  Aligned_cols=75  Identities=16%  Similarity=0.132  Sum_probs=46.7

Q ss_pred             CCcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      .||||++|..|++.|.++.+ ++..+.++...                         ++.+   ....++  ++|+||.+
T Consensus         8 vGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~-------------------------~~~~---~~~~~~--~~DvvFla   57 (313)
T PRK11863          8 DGEAGTTGLQIRERLAGRSDIELLSIPEAKRK-------------------------DAAA---RRELLN--AADVAILC   57 (313)
T ss_pred             ECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC-------------------------cccC---chhhhc--CCCEEEEC
Confidence            49999999999999998853 55555443221                         1111   122344  78999987


Q ss_pred             CCCCcccHHHHHHhC-CCCccEEEEecce
Q 023110           80 NGREADEVEPILDAL-PNLEQFIYCSSAG  107 (287)
Q Consensus        80 a~~~~~~~~~ll~~~-~~~~~~i~~Ss~~  107 (287)
                      ..  ......++..+ +...++|=.|+..
T Consensus        58 lp--~~~s~~~~~~~~~~g~~VIDlSadf   84 (313)
T PRK11863         58 LP--DDAAREAVALIDNPATRVIDASTAH   84 (313)
T ss_pred             CC--HHHHHHHHHHHHhCCCEEEECChhh
Confidence            64  33444455444 3445788888765

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=93.06  E-value=0.082  Score=38.81  Aligned_cols=73  Identities=18%  Similarity=0.222  Sum_probs=43.7

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      +|++|.+|++++..|...+  .+++.++++.........++  ..... .......... .+.+    .++  ++|+||.
T Consensus         6 iGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl--~~~~~-~~~~~~~i~~-~~~~----~~~--~aDivvi   75 (141)
T PF00056_consen    6 IGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDL--SHASA-PLPSPVRITS-GDYE----ALK--DADIVVI   75 (141)
T ss_dssp             ESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHH--HHHHH-GSTEEEEEEE-SSGG----GGT--TESEEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhh--hhhhh-hccccccccc-cccc----ccc--cccEEEE
Confidence            4889999999999999985  68999999865421111000  00111 1112211111 2333    344  8999999


Q ss_pred             cCCCC
Q 023110           79 INGRE   83 (287)
Q Consensus        79 ~a~~~   83 (287)
                      ++|..
T Consensus        76 tag~~   80 (141)
T PF00056_consen   76 TAGVP   80 (141)
T ss_dssp             TTSTS
T ss_pred             ecccc
Confidence            99874

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=93.05  E-value=1.1  Score=36.38  Aligned_cols=104  Identities=16%  Similarity=0.178  Sum_probs=60.0

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccc----cC---CCCC-------hhhhhhhcCCe--EEEEecCCChHHHH
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQ----QL---PGES-------DQEFAEFSSKI--LHLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~----~~---~~~~-------~~~~~~~~~~~--~~i~~D~~d~~~~~   65 (287)
                      |.|-+|+.+++.|...|. ++++++.+.-....    .+   ....       ...+.+..+.+  +.+...+ +.+.+.
T Consensus        39 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i-~~~~~~  117 (245)
T PRK05690         39 GLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARL-DDDELA  117 (245)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccC-CHHHHH
Confidence            458999999999999985 77777765432110    00   0111       11222233444  3444444 345567


Q ss_pred             hhhhcCCccEEEecCCCCcccHHHHHHhCC-CCccEEEEecceeec
Q 023110           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~  110 (287)
                      ++++  ++|+||.+.. +......+-++|. ..+++|+.++.+.+|
T Consensus       118 ~~~~--~~DiVi~~~D-~~~~r~~ln~~~~~~~ip~v~~~~~g~~G  160 (245)
T PRK05690        118 ALIA--GHDLVLDCTD-NVATRNQLNRACFAAKKPLVSGAAIRMEG  160 (245)
T ss_pred             HHHh--cCCEEEecCC-CHHHHHHHHHHHHHhCCEEEEeeeccCCc
Confidence            7787  8999999975 2333333445565 557788766544433

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=93.04  E-value=1.6  Score=34.04  Aligned_cols=103  Identities=15%  Similarity=0.102  Sum_probs=60.0

Q ss_pred             ccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCC-------CC-------hhhhhhhcCCe--EEEEecCCChHHHHh
Q 023110            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG-------ES-------DQEFAEFSSKI--LHLKGDRKDYDFVKS   66 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~-------~~-------~~~~~~~~~~~--~~i~~D~~d~~~~~~   66 (287)
                      .|-+|.++++.|...|. +++.++.+.-.....-++       ..       ...+.+..+.+  +.+...+.  +...+
T Consensus        29 ~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~~~--~~~~~  106 (197)
T cd01492          29 LKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDDIS--EKPEE  106 (197)
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecCcc--ccHHH
Confidence            44599999999999996 588887664321111110       00       11123333433  33444443  22345


Q ss_pred             hhhcCCccEEEecCCCCcccHHHHHHhCC-CCccEEEEecceeecc
Q 023110           67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (287)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~  111 (287)
                      .++  ++|+||.+.. +......+-+.|. ...++|+.++.+.+|.
T Consensus       107 ~~~--~~dvVi~~~~-~~~~~~~ln~~c~~~~ip~i~~~~~G~~G~  149 (197)
T cd01492         107 FFS--QFDVVVATEL-SRAELVKINELCRKLGVKFYATGVHGLFGF  149 (197)
T ss_pred             HHh--CCCEEEECCC-CHHHHHHHHHHHHHcCCCEEEEEecCCEEE
Confidence            566  8999998754 3444444555666 5568998888777664

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=92.97  E-value=0.64  Score=39.18  Aligned_cols=93  Identities=18%  Similarity=0.186  Sum_probs=59.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHh---hhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS---SLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~---~~~~~~~d~vi   77 (287)
                      +|++|-+|..+++.+...|.+|++++++..... .+..          .+... ..|..+.+....   .....++|.++
T Consensus       173 ~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~-~~~~----------~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i  240 (342)
T cd08266         173 HGAGSGVGSAAIQIAKLFGATVIATAGSEDKLE-RAKE----------LGADY-VIDYRKEDFVREVRELTGKRGVDVVV  240 (342)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHH----------cCCCe-EEecCChHHHHHHHHHhCCCCCcEEE
Confidence            488899999999999999999999988765421 1110          11111 124444433333   33334789999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEecce
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~  107 (287)
                      ++++.  ......++.++...+++.+++..
T Consensus       241 ~~~g~--~~~~~~~~~l~~~G~~v~~~~~~  268 (342)
T cd08266         241 EHVGA--ATWEKSLKSLARGGRLVTCGATT  268 (342)
T ss_pred             ECCcH--HHHHHHHHHhhcCCEEEEEecCC
Confidence            99874  34555666666446788887643

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=92.94  E-value=0.22  Score=42.40  Aligned_cols=89  Identities=16%  Similarity=0.177  Sum_probs=50.6

Q ss_pred             CCcccchHHHHHHHHHH-cCCe---EEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVK-EGHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      .||||++|+.|++.|.+ ..++   +..+....+. -+.+.          ..+.+...-++ +++.    ++  ++|+|
T Consensus        11 vGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~sa-Gk~~~----------~~~~~l~v~~~-~~~~----~~--~~Div   72 (347)
T PRK06728         11 VGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSA-GKTVQ----------FKGREIIIQEA-KINS----FE--GVDIA   72 (347)
T ss_pred             EeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccC-CCCee----------eCCcceEEEeC-CHHH----hc--CCCEE
Confidence            49999999999999996 4555   5555443221 11111          01112222222 3332    34  79999


Q ss_pred             EecCCCCcccHHHHHHhCC-CCccEEEEecceee
Q 023110           77 YDINGREADEVEPILDALP-NLEQFIYCSSAGVY  109 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~  109 (287)
                      |.+++.  .....++..+. ....+|=.||..-+
T Consensus        73 f~a~~~--~~s~~~~~~~~~~G~~VID~Ss~fR~  104 (347)
T PRK06728         73 FFSAGG--EVSRQFVNQAVSSGAIVIDNTSEYRM  104 (347)
T ss_pred             EECCCh--HHHHHHHHHHHHCCCEEEECchhhcC
Confidence            998753  34455555443 44677777876654

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=92.94  E-value=0.3  Score=40.67  Aligned_cols=29  Identities=31%  Similarity=0.335  Sum_probs=26.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|+.+++.|.+.|++|++.+|++..
T Consensus         6 G~G~mG~~iA~~l~~~G~~V~~~dr~~~~   34 (291)
T TIGR01505         6 GLGIMGSPMSINLAKAGYQLHVTTIGPEV   34 (291)
T ss_pred             EecHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            57999999999999999999999998755

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=92.91  E-value=0.4  Score=40.71  Aligned_cols=29  Identities=21%  Similarity=0.265  Sum_probs=26.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|+.+++.|...|++|++.+|++..
T Consensus       153 G~G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        153 GTGRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            67999999999999999999999988643

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.88  E-value=0.074  Score=44.77  Aligned_cols=29  Identities=24%  Similarity=0.375  Sum_probs=26.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |+|.+|..++..|.+.|++|++++++...
T Consensus        11 GaG~mG~~iA~~l~~~g~~V~~~d~~~~~   39 (311)
T PRK06130         11 GAGTMGSGIAALFARKGLQVVLIDVMEGA   39 (311)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            57999999999999999999999988765

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=92.87  E-value=0.39  Score=40.41  Aligned_cols=91  Identities=16%  Similarity=0.116  Sum_probs=57.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC--hHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d--~~~~~~~~~~~~~d~vi~   78 (287)
                      .|++|.+|..+++.+...|.+|++++++..+.. .+.+          -++..+ .|..+  .+.+... ...++|+|++
T Consensus       153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~----------~g~~~v-~~~~~~~~~~~~~~-~~~~~d~vld  219 (326)
T cd08289         153 TGATGGVGSLAVSILAKLGYEVVASTGKADAAD-YLKK----------LGAKEV-IPREELQEESIKPL-EKQRWAGAVD  219 (326)
T ss_pred             EcCCchHHHHHHHHHHHCCCeEEEEecCHHHHH-HHHH----------cCCCEE-EcchhHHHHHHHhh-ccCCcCEEEE
Confidence            378899999999999999999999988876521 1111          122222 12222  2233333 2347999999


Q ss_pred             cCCCCcccHHHHHHhCCCCccEEEEecc
Q 023110           79 INGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                      +.+.  ......++.++...++|.++..
T Consensus       220 ~~g~--~~~~~~~~~l~~~G~~i~~g~~  245 (326)
T cd08289         220 PVGG--KTLAYLLSTLQYGGSVAVSGLT  245 (326)
T ss_pred             CCcH--HHHHHHHHHhhcCCEEEEEeec
Confidence            9874  3455666776655688877653

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=92.72  E-value=0.86  Score=38.03  Aligned_cols=92  Identities=15%  Similarity=0.161  Sum_probs=56.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChH---HHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~~~~~d~vi   77 (287)
                      +|++|.+|..+++.+...|.+|++++++..... .+..          .++..+ .|..+.+   .+.......++|.++
T Consensus       151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~----------~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi  218 (325)
T cd08253         151 HGGSGAVGHAAVQLARWAGARVIATASSAEGAE-LVRQ----------AGADAV-FNYRAEDLADRILAATAGQGVDVII  218 (325)
T ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHH----------cCCCEE-EeCCCcCHHHHHHHHcCCCceEEEE
Confidence            478999999999999999999999988765421 1110          122221 2333332   333333434799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEecc
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                      ++++..  ......+.+....+++.+++.
T Consensus       219 ~~~~~~--~~~~~~~~l~~~g~~v~~~~~  245 (325)
T cd08253         219 EVLANV--NLAKDLDVLAPGGRIVVYGSG  245 (325)
T ss_pred             ECCchH--HHHHHHHhhCCCCEEEEEeec
Confidence            998642  234444555544678877753

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=92.71  E-value=0.37  Score=42.03  Aligned_cols=65  Identities=17%  Similarity=0.053  Sum_probs=49.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ++|..|+.++..+.+.|++|++++.++......+.           +  .++..|..|.+.+.++.++.++|.|+...
T Consensus        19 G~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a-----------d--~~~~~~~~d~~~l~~~~~~~~id~vi~~~   83 (395)
T PRK09288         19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-----------H--RSHVIDMLDGDALRAVIEREKPDYIVPEI   83 (395)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh-----------h--heEECCCCCHHHHHHHHHHhCCCEEEEee
Confidence            35789999999999999999999988654221111           1  24677888999999988878899998654

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=92.68  E-value=0.5  Score=40.41  Aligned_cols=71  Identities=24%  Similarity=0.225  Sum_probs=44.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhh--cCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS--AKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~~~d~vi~   78 (287)
                      .||+|-+|++.++.+...+..++..+++.+.. +..+.          .+.. ...|..+++..+...+  ..++|+|++
T Consensus       164 ~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~----------lGAd-~vvdy~~~~~~e~~kk~~~~~~DvVlD  231 (347)
T KOG1198|consen  164 LGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKK----------LGAD-EVVDYKDENVVELIKKYTGKGVDVVLD  231 (347)
T ss_pred             EeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHH----------cCCc-EeecCCCHHHHHHHHhhcCCCccEEEE
Confidence            48999999999999999994444555554441 11111          1222 2346666554444444  347999999


Q ss_pred             cCCCC
Q 023110           79 INGRE   83 (287)
Q Consensus        79 ~a~~~   83 (287)
                      |.+..
T Consensus       232 ~vg~~  236 (347)
T KOG1198|consen  232 CVGGS  236 (347)
T ss_pred             CCCCC
Confidence            99864

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.67  E-value=0.069  Score=44.37  Aligned_cols=30  Identities=17%  Similarity=0.314  Sum_probs=27.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~   32 (287)
                      |+|.+|..++..|+..|++|++.+++++..
T Consensus        12 GaG~mG~~iA~~~a~~G~~V~l~d~~~~~~   41 (286)
T PRK07819         12 GAGQMGAGIAEVCARAGVDVLVFETTEELA   41 (286)
T ss_pred             cccHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            569999999999999999999999998763

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=92.66  E-value=0.86  Score=39.21  Aligned_cols=88  Identities=15%  Similarity=0.152  Sum_probs=55.1

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|.+|..+++.+...|.+|++++.+..+.....++          -+++.+. |..+.+.+.+...  ++|+||.+.+.
T Consensus       191 G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~----------~Ga~~vi-~~~~~~~~~~~~~--~~D~vid~~g~  257 (360)
T PLN02586        191 GLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINR----------LGADSFL-VSTDPEKMKAAIG--TMDYIIDTVSA  257 (360)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHh----------CCCcEEE-cCCCHHHHHhhcC--CCCEEEECCCC
Confidence            469999999999999999998887765542211111          1333222 2333344555444  68999999873


Q ss_pred             CcccHHHHHHhCCCCccEEEEe
Q 023110           83 EADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                       .......++.++...+++.++
T Consensus       258 -~~~~~~~~~~l~~~G~iv~vG  278 (360)
T PLN02586        258 -VHALGPLLGLLKVNGKLITLG  278 (360)
T ss_pred             -HHHHHHHHHHhcCCcEEEEeC
Confidence             224455677777446777665

>cd08293 PTGR2 Prostaglandin reductase

Probab=92.62  E-value=0.64  Score=39.55  Aligned_cols=92  Identities=15%  Similarity=0.180  Sum_probs=57.2

Q ss_pred             CCcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh---HHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~~~~~~~~~~~d~v   76 (287)
                      +||+|.+|..+++.+...|. +|++++++.++.. .+.+         .-+++.+ .|..+.   +.+.++.. .++|+|
T Consensus       161 ~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~-~~~~---------~lGa~~v-i~~~~~~~~~~i~~~~~-~gvd~v  228 (345)
T cd08293         161 SGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQ-LLKS---------ELGFDAA-INYKTDNVAERLRELCP-EGVDVY  228 (345)
T ss_pred             ECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHH-HHHH---------hcCCcEE-EECCCCCHHHHHHHHCC-CCceEE
Confidence            48899999999999888998 7999988765521 1100         0122222 222222   22333322 479999


Q ss_pred             EecCCCCcccHHHHHHhCCCCccEEEEecc
Q 023110           77 YDINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                      +++.+..  .....++.++...+++.++..
T Consensus       229 id~~g~~--~~~~~~~~l~~~G~iv~~G~~  256 (345)
T cd08293         229 FDNVGGE--ISDTVISQMNENSHIILCGQI  256 (345)
T ss_pred             EECCCcH--HHHHHHHHhccCCEEEEEeee
Confidence            9998743  346667777755678877643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=92.61  E-value=0.43  Score=35.70  Aligned_cols=71  Identities=14%  Similarity=0.092  Sum_probs=45.9

Q ss_pred             ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCCC
Q 023110            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~~   83 (287)
                      =|.+|+.+++.|...|.+|++...++-...+..           .++++..        .+.+++.  ..|++|.+.|..
T Consensus        31 YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-----------~dGf~v~--------~~~~a~~--~adi~vtaTG~~   89 (162)
T PF00670_consen   31 YGKVGKGIARALRGLGARVTVTEIDPIRALQAA-----------MDGFEVM--------TLEEALR--DADIFVTATGNK   89 (162)
T ss_dssp             -SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-----------HTT-EEE---------HHHHTT--T-SEEEE-SSSS
T ss_pred             CCcccHHHHHHHhhCCCEEEEEECChHHHHHhh-----------hcCcEec--------CHHHHHh--hCCEEEECCCCc
Confidence            488999999999999999999999876533222           3566543        2566777  899999988865


Q ss_pred             cccHHHHHHhCC
Q 023110           84 ADEVEPILDALP   95 (287)
Q Consensus        84 ~~~~~~ll~~~~   95 (287)
                      ..-+..-++.++
T Consensus        90 ~vi~~e~~~~mk  101 (162)
T PF00670_consen   90 DVITGEHFRQMK  101 (162)
T ss_dssp             SSB-HHHHHHS-
T ss_pred             cccCHHHHHHhc
Confidence            444556666666

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=92.60  E-value=0.56  Score=39.43  Aligned_cols=28  Identities=29%  Similarity=0.482  Sum_probs=25.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~   30 (287)
                      |+|.+|+++++.|.+.||+|++.+|+..
T Consensus        11 G~G~~G~~lA~~l~~~G~~V~~~~r~~~   38 (308)
T PRK14619         11 GAGAWGSTLAGLASANGHRVRVWSRRSG   38 (308)
T ss_pred             CccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            6799999999999999999999998753

>PRK07574 formate dehydrogenase; Provisional

Probab=92.57  E-value=0.28  Score=42.47  Aligned_cols=85  Identities=18%  Similarity=0.073  Sum_probs=53.1

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-||+.+++.|...|.+|++.+|...... ...          ..++.       -..++.++++  .+|+|+.+...
T Consensus       199 G~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~-~~~----------~~g~~-------~~~~l~ell~--~aDvV~l~lPl  258 (385)
T PRK07574        199 GAGRIGLAVLRRLKPFDVKLHYTDRHRLPEE-VEQ----------ELGLT-------YHVSFDSLVS--VCDVVTIHCPL  258 (385)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEECCCCCchh-hHh----------hcCce-------ecCCHHHHhh--cCCEEEEcCCC
Confidence            5789999999999999999999998753211 000          01121       1224677787  88988866543


Q ss_pred             CcccHHHH-----HHhCCCCccEEEEeccee
Q 023110           83 EADEVEPI-----LDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~~~~~l-----l~~~~~~~~~i~~Ss~~v  108 (287)
                       ...++.+     +..++...-||.+|-..+
T Consensus       259 -t~~T~~li~~~~l~~mk~ga~lIN~aRG~i  288 (385)
T PRK07574        259 -HPETEHLFDADVLSRMKRGSYLVNTARGKI  288 (385)
T ss_pred             -CHHHHHHhCHHHHhcCCCCcEEEECCCCch
Confidence             3334444     444554456776665444

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=92.51  E-value=0.46  Score=39.71  Aligned_cols=29  Identities=28%  Similarity=0.475  Sum_probs=26.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|..+++.|.+.|++|++.+|++..
T Consensus         8 GlG~mG~~mA~~l~~~G~~V~v~d~~~~~   36 (296)
T PRK15461          8 GLGQMGSPMASNLLKQGHQLQVFDVNPQA   36 (296)
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            57999999999999999999999998765

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=92.46  E-value=1.1  Score=37.62  Aligned_cols=91  Identities=19%  Similarity=0.185  Sum_probs=58.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh---HHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~~~~~~~~~~~d~vi   77 (287)
                      .|++|-+|..+++.+...|.+|++++++..... .+.+          .+++.+. +..+.   +.+.......++|+|+
T Consensus       146 ~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~-~~~~----------~g~~~~~-~~~~~~~~~~i~~~~~~~~~d~v~  213 (324)
T cd08292         146 NAAGGAVGKLVAMLAAARGINVINLVRRDAGVA-ELRA----------LGIGPVV-STEQPGWQDKVREAAGGAPISVAL  213 (324)
T ss_pred             cccccHHHHHHHHHHHHCCCeEEEEecCHHHHH-HHHh----------cCCCEEE-cCCCchHHHHHHHHhCCCCCcEEE
Confidence            488999999999999999999999988765521 1110          1222221 22222   3344444444799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ++.+..  .....++.++...+|+.++.
T Consensus       214 d~~g~~--~~~~~~~~l~~~g~~v~~g~  239 (324)
T cd08292         214 DSVGGK--LAGELLSLLGEGGTLVSFGS  239 (324)
T ss_pred             ECCCCh--hHHHHHHhhcCCcEEEEEec
Confidence            998853  34566666665567877754

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=92.44  E-value=0.1  Score=46.97  Aligned_cols=29  Identities=21%  Similarity=0.249  Sum_probs=26.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |+|.+|..++..|++.|++|++.++++..
T Consensus        11 G~G~MG~~iA~~la~~G~~V~v~D~~~~~   39 (495)
T PRK07531         11 GGGVIGGGWAARFLLAGIDVAVFDPHPEA   39 (495)
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            68999999999999999999999998765

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=92.40  E-value=0.1  Score=42.78  Aligned_cols=29  Identities=31%  Similarity=0.466  Sum_probs=26.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|++++..|++.||+|++.+|+.++
T Consensus        42 GLG~MG~~M~~nLik~G~kVtV~dr~~~k   70 (327)
T KOG0409|consen   42 GLGNMGSAMVSNLIKAGYKVTVYDRTKDK   70 (327)
T ss_pred             eeccchHHHHHHHHHcCCEEEEEeCcHHH
Confidence            56889999999999999999999999876

>PRK06487 glycerate dehydrogenase; Provisional

Probab=92.35  E-value=0.5  Score=39.88  Aligned_cols=77  Identities=17%  Similarity=0.091  Sum_probs=47.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-||+.+++.|...|.+|++.+|....                 ...        +..++.++++  .+|+|+.+...
T Consensus       155 G~G~IG~~vA~~l~~fgm~V~~~~~~~~~-----------------~~~--------~~~~l~ell~--~sDiv~l~lPl  207 (317)
T PRK06487        155 GHGELGGAVARLAEAFGMRVLIGQLPGRP-----------------ARP--------DRLPLDELLP--QVDALTLHCPL  207 (317)
T ss_pred             CCCHHHHHHHHHHhhCCCEEEEECCCCCc-----------------ccc--------cccCHHHHHH--hCCEEEECCCC
Confidence            57999999999999999999998875321                 011        1124677777  77877755443


Q ss_pred             CcccHHH-----HHHhCCCCccEEEEecce
Q 023110           83 EADEVEP-----ILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~~~~~-----ll~~~~~~~~~i~~Ss~~  107 (287)
                      + ..|+.     .++.|+...-||.+|=..
T Consensus       208 t-~~T~~li~~~~~~~mk~ga~lIN~aRG~  236 (317)
T PRK06487        208 T-EHTRHLIGARELALMKPGALLINTARGG  236 (317)
T ss_pred             C-hHHhcCcCHHHHhcCCCCeEEEECCCcc
Confidence            2 22333     334444445566555433

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=92.31  E-value=1.2  Score=37.46  Aligned_cols=92  Identities=23%  Similarity=0.148  Sum_probs=58.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChH---HHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~~~~~d~vi   77 (287)
                      +|++|.+|..+++.+...|.+|++++++..... .+.+          -++..+ .+..+.+   .+.......++|.|+
T Consensus       149 ~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~-~~~~----------~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vl  216 (324)
T cd08244         149 TAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA-LVRA----------LGADVA-VDYTRPDWPDQVREALGGGGVTVVL  216 (324)
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHH----------cCCCEE-EecCCccHHHHHHHHcCCCCceEEE
Confidence            488999999999999999999999988766521 1111          122221 2233322   233333334799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEecc
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                      ++.+..  .....++.+....+++.++..
T Consensus       217 ~~~g~~--~~~~~~~~l~~~g~~v~~g~~  243 (324)
T cd08244         217 DGVGGA--IGRAALALLAPGGRFLTYGWA  243 (324)
T ss_pred             ECCChH--hHHHHHHHhccCcEEEEEecC
Confidence            998743  346667777755688877653

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=92.31  E-value=0.074  Score=39.84  Aligned_cols=85  Identities=21%  Similarity=0.297  Sum_probs=49.5

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|-.|.+++..|..+|++|+...|++..............   ...++.. ...+.-..++.++++  ++|+|+-+.  
T Consensus         6 GaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~---~~~~~~l-~~~i~~t~dl~~a~~--~ad~Iiiav--   77 (157)
T PF01210_consen    6 GAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPK---YLPGIKL-PENIKATTDLEEALE--DADIIIIAV--   77 (157)
T ss_dssp             SSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETT---TSTTSBE-ETTEEEESSHHHHHT--T-SEEEE-S--
T ss_pred             CcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCC---CCCCccc-CcccccccCHHHHhC--cccEEEecc--
Confidence            67999999999999999999999998754211000000000   0011111 111111234667787  899988764  


Q ss_pred             CcccHHHHHHhCC
Q 023110           83 EADEVEPILDALP   95 (287)
Q Consensus        83 ~~~~~~~ll~~~~   95 (287)
                      +....+.+++.+.
T Consensus        78 Ps~~~~~~~~~l~   90 (157)
T PF01210_consen   78 PSQAHREVLEQLA   90 (157)
T ss_dssp             -GGGHHHHHHHHT
T ss_pred             cHHHHHHHHHHHh
Confidence            4666777888766

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=92.28  E-value=0.24  Score=45.99  Aligned_cols=66  Identities=21%  Similarity=0.326  Sum_probs=52.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d~vi~~a~   81 (287)
                      |-|.+|+.+++.|.++|+++++++.+++... .++          ..+...+.+|.++++.++++ ++  ++|.||-+..
T Consensus       407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~-~~~----------~~g~~v~~GDat~~~~L~~agi~--~A~~vvv~~~  473 (621)
T PRK03562        407 GFGRFGQIVGRLLLSSGVKMTVLDHDPDHIE-TLR----------KFGMKVFYGDATRMDLLESAGAA--KAEVLINAID  473 (621)
T ss_pred             ecChHHHHHHHHHHhCCCCEEEEECCHHHHH-HHH----------hcCCeEEEEeCCCHHHHHhcCCC--cCCEEEEEeC
Confidence            5689999999999999999999999987632 222          24788999999999987754 33  7888887764

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=92.27  E-value=0.15  Score=40.59  Aligned_cols=30  Identities=30%  Similarity=0.324  Sum_probs=27.6

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      ||+|.+|++++..|.+.|++|.+.+|+++.
T Consensus         7 GG~G~mG~ala~~L~~~G~~V~v~~r~~~~   36 (219)
T TIGR01915         7 GGTGDQGKGLALRLAKAGNKIIIGSRDLEK   36 (219)
T ss_pred             cCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence            789999999999999999999999998765

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=92.25  E-value=1.7  Score=37.65  Aligned_cols=103  Identities=16%  Similarity=0.093  Sum_probs=60.8

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccCC-------CC-------ChhhhhhhcCCeE--EEEecCCChHHHH
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP-------GE-------SDQEFAEFSSKIL--HLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~-------~~-------~~~~~~~~~~~~~--~i~~D~~d~~~~~   65 (287)
                      |.|-+|+.++..|...|. +++.++++.-.....-+       +.       ....+.+..+.++  .+...+ +.+.+.
T Consensus       142 G~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~-~~~~~~  220 (376)
T PRK08762        142 GAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERV-TSDNVE  220 (376)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccC-ChHHHH
Confidence            568899999999999996 78888887322100000       00       0112222233343  333333 345567


Q ss_pred             hhhhcCCccEEEecCCCCcccHHH-HHHhCC-CCccEEEEecceeec
Q 023110           66 SSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~-ll~~~~-~~~~~i~~Ss~~v~~  110 (287)
                      ++++  ++|+||++....  .++. +-++|. ...++|+.+..+.+|
T Consensus       221 ~~~~--~~D~Vv~~~d~~--~~r~~ln~~~~~~~ip~i~~~~~g~~g  263 (376)
T PRK08762        221 ALLQ--DVDVVVDGADNF--PTRYLLNDACVKLGKPLVYGAVFRFEG  263 (376)
T ss_pred             HHHh--CCCEEEECCCCH--HHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            7787  899999997642  2333 445565 567888887665444

>PRK08328 hypothetical protein; Provisional

Probab=92.24  E-value=2.4  Score=33.99  Aligned_cols=104  Identities=19%  Similarity=0.248  Sum_probs=63.7

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccc----cC---CCCCh--------hhhhhhcCCe--EEEEecCCChHHH
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQ----QL---PGESD--------QEFAEFSSKI--LHLKGDRKDYDFV   64 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~----~~---~~~~~--------~~~~~~~~~~--~~i~~D~~d~~~~   64 (287)
                      |.|-+|+++++.|...|. ++++++.+.-....    .+   .....        ..+.+..+.+  +.+...+ +.+.+
T Consensus        34 G~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~~~-~~~~~  112 (231)
T PRK08328         34 GVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVGRL-SEENI  112 (231)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEeccC-CHHHH
Confidence            678899999999999985 67788766433111    11   01111        1122223333  3444444 44557


Q ss_pred             HhhhhcCCccEEEecCCCCcccHHHHH-HhCC-CCccEEEEecceeecc
Q 023110           65 KSSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYLK  111 (287)
Q Consensus        65 ~~~~~~~~~d~vi~~a~~~~~~~~~ll-~~~~-~~~~~i~~Ss~~v~~~  111 (287)
                      .++++  ++|+||.+... . .++.++ ++|. ...++|+.++.+.+|.
T Consensus       113 ~~~l~--~~D~Vid~~d~-~-~~r~~l~~~~~~~~ip~i~g~~~g~~G~  157 (231)
T PRK08328        113 DEVLK--GVDVIVDCLDN-F-ETRYLLDDYAHKKGIPLVHGAVEGTYGQ  157 (231)
T ss_pred             HHHHh--cCCEEEECCCC-H-HHHHHHHHHHHHcCCCEEEEeeccCEEE
Confidence            77888  89999998764 2 344444 4455 5678998888777764

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=92.20  E-value=0.73  Score=38.86  Aligned_cols=93  Identities=19%  Similarity=0.153  Sum_probs=57.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh---HHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~~~~~~~~~~~d~vi   77 (287)
                      .|++|.+|..+++.+...|.+|++++++..... .+..          -++..+ .+..+.   +.+..... .++|.|+
T Consensus       146 ~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~----------~g~~~v-~~~~~~~~~~~~~~~~~-~~vd~v~  212 (329)
T cd08250         146 TAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE-FLKS----------LGCDRP-INYKTEDLGEVLKKEYP-KGVDVVY  212 (329)
T ss_pred             EeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH-HHHH----------cCCceE-EeCCCccHHHHHHHhcC-CCCeEEE
Confidence            388999999999999999999999988765421 1111          112211 122222   22322222 4799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEeccee
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      ++.+.  ......++.+....++|.+++...
T Consensus       213 ~~~g~--~~~~~~~~~l~~~g~~v~~g~~~~  241 (329)
T cd08250         213 ESVGG--EMFDTCVDNLALKGRLIVIGFISG  241 (329)
T ss_pred             ECCcH--HHHHHHHHHhccCCeEEEEecccC
Confidence            99873  455566666665568888876543

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=92.18  E-value=0.72  Score=41.49  Aligned_cols=92  Identities=12%  Similarity=0.058  Sum_probs=59.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh-------------H---HHHh
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-------------D---FVKS   66 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~-------------~---~~~~   66 (287)
                      |.|-+|...+..+...|.+|+++++++.... ..+          .-+.+++..|..+.             +   ...+
T Consensus       172 GaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle-~ae----------slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        172 GAGVAGLAAIGAAGSLGAIVRAFDTRPEVAE-QVE----------SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH----------HcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            6799999999999999999999999887632 211          12444443333211             1   1112


Q ss_pred             hhhc--CCccEEEecCCCCcc----c-HHHHHHhCCCCccEEEEec
Q 023110           67 SLSA--KGFDVVYDINGREAD----E-VEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        67 ~~~~--~~~d~vi~~a~~~~~----~-~~~ll~~~~~~~~~i~~Ss  105 (287)
                      .+.+  .++|+||.+++....    . ++..++.++....++.++.
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~  286 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAA  286 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEcc
Confidence            2221  279999999987432    2 4778888885567887775

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=92.15  E-value=0.58  Score=39.38  Aligned_cols=27  Identities=19%  Similarity=0.317  Sum_probs=24.2

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGK   29 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~   29 (287)
                      |.|-||+.+++.+...|.+|.+.+|..
T Consensus       152 G~G~IG~~vA~~~~~fgm~V~~~d~~~  178 (311)
T PRK08410        152 GLGTIGKRVAKIAQAFGAKVVYYSTSG  178 (311)
T ss_pred             CCCHHHHHHHHHHhhcCCEEEEECCCc
Confidence            579999999999999999999998853

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=92.10  E-value=1.4  Score=35.80  Aligned_cols=79  Identities=19%  Similarity=0.103  Sum_probs=56.1

Q ss_pred             hHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCCCc-c
Q 023110            7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREA-D   85 (287)
Q Consensus         7 iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~-~   85 (287)
                      =|+.|++.|.+.|+ |.+-+-..-. ......        .......+.+-+.+.+.+.+++++.+++.||+...+-. .
T Consensus        11 E~r~la~~L~~~g~-v~~sv~t~~g-~~~~~~--------~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPfA~~   80 (249)
T PF02571_consen   11 EGRKLAERLAEAGY-VIVSVATSYG-GELLKP--------ELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPFAAE   80 (249)
T ss_pred             HHHHHHHHHHhcCC-EEEEEEhhhh-Hhhhcc--------ccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCchHHH
Confidence            37899999999998 5544333222 111100        02466788888889999999999999999999987654 3


Q ss_pred             cHHHHHHhCC
Q 023110           86 EVEPILDALP   95 (287)
Q Consensus        86 ~~~~ll~~~~   95 (287)
                      -+.++.++|+
T Consensus        81 is~na~~a~~   90 (249)
T PF02571_consen   81 ISQNAIEACR   90 (249)
T ss_pred             HHHHHHHHHh
Confidence            4677888887

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=92.02  E-value=0.12  Score=44.92  Aligned_cols=29  Identities=21%  Similarity=0.391  Sum_probs=25.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~   32 (287)
                      |+|++|..++..|. .||+|+++++++...
T Consensus         7 GlGyvGl~~A~~lA-~G~~VigvD~d~~kv   35 (388)
T PRK15057          7 GTGYVGLSNGLLIA-QNHEVVALDILPSRV   35 (388)
T ss_pred             CCCHHHHHHHHHHH-hCCcEEEEECCHHHH
Confidence            68999999996665 599999999998774

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=92.02  E-value=0.51  Score=40.08  Aligned_cols=94  Identities=19%  Similarity=0.250  Sum_probs=50.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|-+|..++..|.+.|++|+++.|++.... .+........  ...+... ...+.-.+++.++++  ++|+||-+...
T Consensus        11 G~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~-~i~~~~~~~~--~~~g~~~-~~~~~~~~~~~e~~~--~aD~Vi~~v~~   84 (328)
T PRK14618         11 GAGAWGTALAVLAASKGVPVRLWARRPEFAA-ALAAERENRE--YLPGVAL-PAELYPTADPEEALA--GADFAVVAVPS   84 (328)
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHhCcccc--cCCCCcC-CCCeEEeCCHHHHHc--CCCEEEEECch
Confidence            6799999999999999999999999765421 1110000000  0001100 000111123344555  78999887653


Q ss_pred             CcccHHHHHHhCCCCccEEEEe
Q 023110           83 EADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      .  .+..+++.++....+|.++
T Consensus        85 ~--~~~~v~~~l~~~~~vi~~~  104 (328)
T PRK14618         85 K--ALRETLAGLPRALGYVSCA  104 (328)
T ss_pred             H--HHHHHHHhcCcCCEEEEEe
Confidence            3  4566776665333444343

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=91.95  E-value=0.87  Score=38.09  Aligned_cols=92  Identities=21%  Similarity=0.208  Sum_probs=57.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCe-EEEEecCCC-hHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~D~~d-~~~~~~~~~~~~~d~vi~   78 (287)
                      +|++|.+|..+++.+...|.+|+.++++..... .+..          .++ .++..+..+ .+.+.......++|.+++
T Consensus       151 ~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~-~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  219 (328)
T cd08268         151 TAASSSVGLAAIQIANAAGATVIATTRTSEKRD-ALLA----------LGAAHVIVTDEEDLVAEVLRITGGKGVDVVFD  219 (328)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHHH----------cCCCEEEecCCccHHHHHHHHhCCCCceEEEE
Confidence            488999999999999999999999988765421 1110          112 122222111 222333333346999999


Q ss_pred             cCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           79 INGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +.+.  ......++.+....+++.++.
T Consensus       220 ~~~~--~~~~~~~~~l~~~g~~v~~g~  244 (328)
T cd08268         220 PVGG--PQFAKLADALAPGGTLVVYGA  244 (328)
T ss_pred             CCch--HhHHHHHHhhccCCEEEEEEe
Confidence            9875  445566666665557776654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=91.93  E-value=0.54  Score=40.34  Aligned_cols=90  Identities=20%  Similarity=0.246  Sum_probs=49.4

Q ss_pred             CCcccchHHHHHHHHHHc-CCe---EEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      .||||++|+.|++.++++ .+.   ++.++.....  .....         ..+-.....++.+.+.    ++  ++|+|
T Consensus         7 VGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg--~~~~~---------f~g~~~~v~~~~~~~~----~~--~~Div   69 (369)
T PRK06598          7 VGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAG--GAAPS---------FGGKEGTLQDAFDIDA----LK--KLDII   69 (369)
T ss_pred             EeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhC--Ccccc---------cCCCcceEEecCChhH----hc--CCCEE
Confidence            499999999999966665 555   5554443221  11111         0111223334444433    34  79999


Q ss_pred             EecCCCCcccHHHHHHhC-C-CC-ccEEEEecceee
Q 023110           77 YDINGREADEVEPILDAL-P-NL-EQFIYCSSAGVY  109 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~-~-~~-~~~i~~Ss~~v~  109 (287)
                      |.+++.  .....+...+ + +. ..+|=.||..=+
T Consensus        70 f~a~~~--~~s~~~~~~~~~aG~~~~VID~Ss~fR~  103 (369)
T PRK06598         70 ITCQGG--DYTNEVYPKLRAAGWQGYWIDAASTLRM  103 (369)
T ss_pred             EECCCH--HHHHHHHHHHHhCCCCeEEEECChHHhC
Confidence            998863  3444555543 3 44 246766765533

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=91.86  E-value=0.29  Score=40.88  Aligned_cols=29  Identities=24%  Similarity=0.469  Sum_probs=26.2

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|..+++.|.+.|++|.+.+|++..
T Consensus         9 G~G~mG~~~a~~l~~~g~~v~~~d~~~~~   37 (296)
T PRK11559          9 GLGIMGKPMSKNLLKAGYSLVVYDRNPEA   37 (296)
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            57999999999999999999999988765

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=91.83  E-value=0.14  Score=34.63  Aligned_cols=72  Identities=19%  Similarity=0.233  Sum_probs=43.9

Q ss_pred             cccchHHHHHHHHHHcC---CeEEEE-EcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            3 GTRFIGVFLSRLLVKEG---HQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g---~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |+|.+|++|++.|++.|   ++|... +|++++..+..+          .-++.....      +..++++  .+|+||-
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~----------~~~~~~~~~------~~~~~~~--~advvil   67 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAK----------EYGVQATAD------DNEEAAQ--EADVVIL   67 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHH----------HCTTEEESE------EHHHHHH--HTSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHH----------hhccccccC------ChHHhhc--cCCEEEE
Confidence            68999999999999999   999965 888766321111          112222221      2345555  7899998


Q ss_pred             cCCCCcccHHHHHHhC
Q 023110           79 INGREADEVEPILDAL   94 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~   94 (287)
                      +.-  ......+++.+
T Consensus        68 av~--p~~~~~v~~~i   81 (96)
T PF03807_consen   68 AVK--PQQLPEVLSEI   81 (96)
T ss_dssp             -S---GGGHHHHHHHH
T ss_pred             EEC--HHHHHHHHHHH
Confidence            754  34444455444

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=91.76  E-value=0.73  Score=39.45  Aligned_cols=90  Identities=16%  Similarity=0.197  Sum_probs=54.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh----HHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~----~~~~~~~~~~~~d~v   76 (287)
                      +|++|.+|..+++.+...|.+|++++++..+.. .++.         .-+++.+. |..+.    +.+..... .++|+|
T Consensus       165 ~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~-~~~~---------~lGa~~vi-~~~~~~~~~~~i~~~~~-~gvD~v  232 (348)
T PLN03154        165 SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD-LLKN---------KLGFDEAF-NYKEEPDLDAALKRYFP-EGIDIY  232 (348)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHHH---------hcCCCEEE-ECCCcccHHHHHHHHCC-CCcEEE
Confidence            488999999999999999999999887765521 1100         01222221 22221    22222222 379999


Q ss_pred             EecCCCCcccHHHHHHhCCCCccEEEEe
Q 023110           77 YDINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      +++.|.  ......++.++...+++.++
T Consensus       233 ~d~vG~--~~~~~~~~~l~~~G~iv~~G  258 (348)
T PLN03154        233 FDNVGG--DMLDAALLNMKIHGRIAVCG  258 (348)
T ss_pred             EECCCH--HHHHHHHHHhccCCEEEEEC
Confidence            999873  35566677777445777554

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=91.71  E-value=2.3  Score=36.59  Aligned_cols=103  Identities=12%  Similarity=0.061  Sum_probs=61.4

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCC-------C-------ChhhhhhhcCCeE--EEEecCCChHHHH
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG-------E-------SDQEFAEFSSKIL--HLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~-------~-------~~~~~~~~~~~~~--~i~~D~~d~~~~~   65 (287)
                      |.|-+|+.+++.|...|. ++++++.+.-.....-++       .       ....+.+..+.++  .+...+. .+...
T Consensus        35 G~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i~-~~~~~  113 (355)
T PRK05597         35 GAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRLT-WSNAL  113 (355)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeecC-HHHHH
Confidence            568999999999999985 677777764221110000       0       1112223334444  4444443 44566


Q ss_pred             hhhhcCCccEEEecCCCCcccHHH-HHHhCC-CCccEEEEecceeec
Q 023110           66 SSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~-ll~~~~-~~~~~i~~Ss~~v~~  110 (287)
                      ++++  ++|+||.+...  ..++. +-++|. ...+||+.++.+.+|
T Consensus       114 ~~~~--~~DvVvd~~d~--~~~r~~~n~~c~~~~ip~v~~~~~g~~g  156 (355)
T PRK05597        114 DELR--DADVILDGSDN--FDTRHLASWAAARLGIPHVWASILGFDA  156 (355)
T ss_pred             HHHh--CCCEEEECCCC--HHHHHHHHHHHHHcCCCEEEEEEecCeE
Confidence            7787  89999999753  23433 334555 567888877665554

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=91.65  E-value=0.76  Score=38.86  Aligned_cols=29  Identities=21%  Similarity=0.159  Sum_probs=25.5

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|-||+.+++.|...|.+|++.++..+.
T Consensus       149 G~G~IG~~va~~l~afgm~v~~~d~~~~~  177 (324)
T COG0111         149 GLGRIGRAVAKRLKAFGMKVIGYDPYSPR  177 (324)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEECCCCch
Confidence            57999999999999999999999994433

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=91.63  E-value=0.26  Score=40.67  Aligned_cols=30  Identities=27%  Similarity=0.402  Sum_probs=26.6

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      +|.|.+|+++++.|.++|+.|.++.++.+.
T Consensus         9 vG~GliG~s~a~~l~~~g~~v~i~g~d~~~   38 (279)
T COG0287           9 VGLGLMGGSLARALKEAGLVVRIIGRDRSA   38 (279)
T ss_pred             ECCchHHHHHHHHHHHcCCeEEEEeecCcH
Confidence            679999999999999999999888877655

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=91.54  E-value=0.36  Score=40.58  Aligned_cols=72  Identities=22%  Similarity=0.150  Sum_probs=43.0

Q ss_pred             CCcccchHHHHHHHHHHcCC--eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      +|++|.+|++++-.|...+.  +++.++.++.. ...++ +.+     ......+....  +.+++.+.++  ++|+||-
T Consensus         5 iGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~-g~a~D-L~~-----~~~~~~i~~~~--~~~~~~~~~~--daDivvi   73 (312)
T TIGR01772         5 LGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA-GVAAD-LSH-----IPTAASVKGFS--GEEGLENALK--GADVVVI   73 (312)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc-EEEch-hhc-----CCcCceEEEec--CCCchHHHcC--CCCEEEE
Confidence            48889999999999988864  88999887621 11111 100     00111222101  1122445666  9999999


Q ss_pred             cCCCC
Q 023110           79 INGRE   83 (287)
Q Consensus        79 ~a~~~   83 (287)
                      ++|..
T Consensus        74 taG~~   78 (312)
T TIGR01772        74 PAGVP   78 (312)
T ss_pred             eCCCC
Confidence            99874

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK06849 hypothetical protein; Provisional

Probab=91.54  E-value=0.77  Score=40.01  Aligned_cols=72  Identities=19%  Similarity=0.212  Sum_probs=47.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC----hHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d----~~~~~~~~~~~~~d~v   76 (287)
                      ||++..+|..+++.|.+.|++|++++..+.......+         ..+....+...-.+    .+.+.+++++.++|+|
T Consensus        10 ~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~---------~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v   80 (389)
T PRK06849         10 TGARAPAALELARLFHNAGHTVILADSLKYPLSRFSR---------AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL   80 (389)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH---------hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence            6888899999999999999999999887644211000         01222222111123    2556667777789999


Q ss_pred             EecCC
Q 023110           77 YDING   81 (287)
Q Consensus        77 i~~a~   81 (287)
                      |-+..
T Consensus        81 IP~~e   85 (389)
T PRK06849         81 IPTCE   85 (389)
T ss_pred             EECCh
Confidence            98764

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=91.54  E-value=0.62  Score=39.14  Aligned_cols=20  Identities=30%  Similarity=0.433  Sum_probs=17.7

Q ss_pred             CCcccchHHHHHHHHHHcCC
Q 023110            1 MGGTRFIGVFLSRLLVKEGH   20 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~   20 (287)
                      .||||.+|+.+++.|.++..
T Consensus         7 vGATG~VG~~~~~~L~e~~f   26 (334)
T COG0136           7 LGATGAVGQVLLELLEERHF   26 (334)
T ss_pred             EeccchHHHHHHHHHHhcCC
Confidence            49999999999999999643

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=91.52  E-value=0.56  Score=39.49  Aligned_cols=92  Identities=17%  Similarity=0.179  Sum_probs=49.0

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeE-E--EEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-H--LKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~--i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      .||+||.|..|++.|..+. .++...+.+... .+.+.+        ...+.. .  ......|.+.+  ..+  ++|+|
T Consensus         8 vGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~-g~~~~~--------~~p~l~g~~~l~~~~~~~~~~--~~~--~~Dvv   74 (349)
T COG0002           8 VGASGYTGLELLRLLAGHPDVELILISSRERA-GKPVSD--------VHPNLRGLVDLPFQTIDPEKI--ELD--ECDVV   74 (349)
T ss_pred             EcCCCCcHHHHHHHHhcCCCeEEEEeechhhc-CCchHH--------hCcccccccccccccCChhhh--hcc--cCCEE
Confidence            4999999999999999984 576665544422 111110        011211 1  11111223322  233  79999


Q ss_pred             EecCCCCcccHHHHHHh-CCCCccEEEEecce
Q 023110           77 YDINGREADEVEPILDA-LPNLEQFIYCSSAG  107 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~-~~~~~~~i~~Ss~~  107 (287)
                      |.+...  .....++.. .....++|=+|+..
T Consensus        75 FlalPh--g~s~~~v~~l~~~g~~VIDLSadf  104 (349)
T COG0002          75 FLALPH--GVSAELVPELLEAGCKVIDLSADF  104 (349)
T ss_pred             EEecCc--hhHHHHHHHHHhCCCeEEECCccc
Confidence            988642  223333333 33334588888765

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=91.46  E-value=2.8  Score=34.45  Aligned_cols=103  Identities=17%  Similarity=0.205  Sum_probs=59.7

Q ss_pred             cccchHHHHHHHHHHcC-CeEEEEEcCCcccc---ccC----CCC-------ChhhhhhhcCCeEEEEe-cCCChHHHHh
Q 023110            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIA---QQL----PGE-------SDQEFAEFSSKILHLKG-DRKDYDFVKS   66 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~---~~~----~~~-------~~~~~~~~~~~~~~i~~-D~~d~~~~~~   66 (287)
                      |.|-+|+++++.|...| -++++++.+.-...   .++    ...       ....+....+.+++... +..+++.+..
T Consensus        37 G~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~i~~e~~~~  116 (268)
T PRK15116         37 GIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFITPDNVAE  116 (268)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecccChhhHHH
Confidence            57899999999999999 58888887643211   111    000       11222223344433222 2334555666


Q ss_pred             hhhcCCccEEEecCCCCcccHHHHHHhCC-CCccEEEEecce
Q 023110           67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAG  107 (287)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~  107 (287)
                      ++. .++|+||.+... ...-..+.+.|. ...+||...+.+
T Consensus       117 ll~-~~~D~VIdaiD~-~~~k~~L~~~c~~~~ip~I~~gGag  156 (268)
T PRK15116        117 YMS-AGFSYVIDAIDS-VRPKAALIAYCRRNKIPLVTTGGAG  156 (268)
T ss_pred             Hhc-CCCCEEEEcCCC-HHHHHHHHHHHHHcCCCEEEECCcc
Confidence            663 269999999763 333445677776 556777555443

>PRK05442 malate dehydrogenase; Provisional

Probab=91.37  E-value=1.1  Score=37.94  Aligned_cols=30  Identities=20%  Similarity=0.128  Sum_probs=24.4

Q ss_pred             CCcccchHHHHHHHHHHcCC-------eEEEEEcCCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKA   30 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-------~V~~~~r~~~   30 (287)
                      +|++|.+|++++-.|...+.       ++..++.++.
T Consensus        10 iGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~   46 (326)
T PRK05442         10 TGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPA   46 (326)
T ss_pred             ECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCc
Confidence            48889999999999887653       7888888643

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.30  E-value=0.47  Score=39.27  Aligned_cols=27  Identities=19%  Similarity=0.391  Sum_probs=22.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR   27 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r   27 (287)
                      .|++|.+|+.++..|+++|..|++..|
T Consensus       165 iG~gg~vGkpia~~L~~~gatVtv~~~  191 (283)
T PRK14192        165 VGRSAILGKPMAMMLLNANATVTICHS  191 (283)
T ss_pred             ECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence            477888999999999988888887766

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=91.20  E-value=0.72  Score=38.64  Aligned_cols=29  Identities=28%  Similarity=0.473  Sum_probs=26.5

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|+.+++.|++.|++|.+.+|++..
T Consensus         7 GlG~MG~~mA~~L~~~g~~v~v~dr~~~~   35 (301)
T PRK09599          7 GLGRMGGNMARRLLRGGHEVVGYDRNPEA   35 (301)
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            57999999999999999999999998765

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=91.16  E-value=0.21  Score=41.61  Aligned_cols=30  Identities=17%  Similarity=0.395  Sum_probs=27.1

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~   32 (287)
                      |+|.+|..++..|...|++|++.++++...
T Consensus        10 GaG~mG~~iA~~la~~G~~V~l~d~~~~~l   39 (291)
T PRK06035         10 GSGVMGQGIAQVFARTGYDVTIVDVSEEIL   39 (291)
T ss_pred             CccHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence            579999999999999999999999987653

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=91.14  E-value=2.5  Score=36.89  Aligned_cols=104  Identities=12%  Similarity=0.038  Sum_probs=62.2

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCcccc----ccC---CCCC-------hhhhhhhcCCeE--EEEecCCChHHHH
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIA----QQL---PGES-------DQEFAEFSSKIL--HLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~----~~~---~~~~-------~~~~~~~~~~~~--~i~~D~~d~~~~~   65 (287)
                      |.|-+|..++..|...|. ++++++.+.-...    +.+   ....       ...+.+..+.++  .+...+. .+...
T Consensus        49 G~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i~-~~~~~  127 (392)
T PRK07878         49 GAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFRLD-PSNAV  127 (392)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEeccCC-hhHHH
Confidence            578899999999999985 6777776532211    111   1111       112233334444  3444543 44567


Q ss_pred             hhhhcCCccEEEecCCCCcccHHH-HHHhCC-CCccEEEEecceeecc
Q 023110           66 SSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYLK  111 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~-ll~~~~-~~~~~i~~Ss~~v~~~  111 (287)
                      ++++  ++|+||.+... . .++. +-++|. ..++||+.+..+.+|.
T Consensus       128 ~~~~--~~D~Vvd~~d~-~-~~r~~ln~~~~~~~~p~v~~~~~g~~G~  171 (392)
T PRK07878        128 ELFS--QYDLILDGTDN-F-ATRYLVNDAAVLAGKPYVWGSIYRFEGQ  171 (392)
T ss_pred             HHHh--cCCEEEECCCC-H-HHHHHHHHHHHHcCCCEEEEEeccCEEE
Confidence            7787  89999998753 3 3444 334555 5578888887776663

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=91.11  E-value=1.5  Score=35.58  Aligned_cols=93  Identities=19%  Similarity=0.247  Sum_probs=55.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHh--hhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS--SLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~--~~~~~~~d~vi~   78 (287)
                      +|+++ +|..+++.+...|.+|++++++..... .+..          .+... ..|..+.+....  .....++|++++
T Consensus       141 ~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~----------~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~  207 (271)
T cd05188         141 LGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLE-LAKE----------LGADH-VIDYKEEDLEEELRLTGGGGADVVID  207 (271)
T ss_pred             ECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHH-HHHH----------hCCce-eccCCcCCHHHHHHHhcCCCCCEEEE
Confidence            47788 999999999999999999998865421 1110          11111 122222222222  222347999999


Q ss_pred             cCCCCcccHHHHHHhCCCCccEEEEecce
Q 023110           79 INGREADEVEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~  107 (287)
                      +++.. .....+++.++...+++.++...
T Consensus       208 ~~~~~-~~~~~~~~~l~~~G~~v~~~~~~  235 (271)
T cd05188         208 AVGGP-ETLAQALRLLRPGGRIVVVGGTS  235 (271)
T ss_pred             CCCCH-HHHHHHHHhcccCCEEEEEccCC
Confidence            98742 34555667666556787776543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

Probab=90.97  E-value=1.5  Score=35.07  Aligned_cols=107  Identities=24%  Similarity=0.302  Sum_probs=66.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCC-----CC-hhhhhhh-cCCeEEEE---ecCCC--hHHHHhhhhc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-----ES-DQEFAEF-SSKILHLK---GDRKD--YDFVKSSLSA   70 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-----~~-~~~~~~~-~~~~~~i~---~D~~d--~~~~~~~~~~   70 (287)
                      +-|.+|..++++|++.||+|++.++++.........     .. .....++ .++..++-   +|+.+  .+.+...++ 
T Consensus         7 GLGrMG~n~v~rl~~~ghdvV~yD~n~~av~~~~~~ga~~a~sl~el~~~L~~pr~vWlMvPag~it~~vi~~la~~L~-   85 (300)
T COG1023           7 GLGRMGANLVRRLLDGGHDVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAGDITDAVIDDLAPLLS-   85 (300)
T ss_pred             ccchhhHHHHHHHHhCCCeEEEEcCCHHHHHHHHhcCCccccCHHHHHHhcCCCcEEEEEccCCCchHHHHHHHHhhcC-
Confidence            468899999999999999999999998763221110     01 1111111 23444433   45555  356667776 


Q ss_pred             CCccEEEecCCCCcccHHHHHHhCC-CCccEEEEecc-eeecc
Q 023110           71 KGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSA-GVYLK  111 (287)
Q Consensus        71 ~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~-~v~~~  111 (287)
                       .=|+||.-...+...+.+-.+.+. ..-+|+-+.|. +++|.
T Consensus        86 -~GDivIDGGNS~y~Ds~rr~~~l~~kgi~flD~GTSGG~~G~  127 (300)
T COG1023          86 -AGDIVIDGGNSNYKDSLRRAKLLAEKGIHFLDVGTSGGVWGA  127 (300)
T ss_pred             -CCCEEEECCccchHHHHHHHHHHHhcCCeEEeccCCCCchhh
Confidence             678999887766666555555544 55677777654 45553

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=90.96  E-value=0.41  Score=40.20  Aligned_cols=72  Identities=22%  Similarity=0.115  Sum_probs=42.6

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      +|++|.+|++++-.|...+  .+++.++.+  .......++.+.     .....+...  ...+++.+.++  ++|+||-
T Consensus         6 IGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~-----~~~~~i~~~--~~~~~~y~~~~--daDivvi   74 (310)
T cd01337           6 LGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHI-----NTPAKVTGY--LGPEELKKALK--GADVVVI   74 (310)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhC-----CCcceEEEe--cCCCchHHhcC--CCCEEEE
Confidence            4888999999999999887  589999887  211111111000     011122111  01122445566  9999999


Q ss_pred             cCCCC
Q 023110           79 INGRE   83 (287)
Q Consensus        79 ~a~~~   83 (287)
                      +||..
T Consensus        75 taG~~   79 (310)
T cd01337          75 PAGVP   79 (310)
T ss_pred             eCCCC
Confidence            99984

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=90.96  E-value=1.4  Score=36.60  Aligned_cols=91  Identities=18%  Similarity=0.181  Sum_probs=55.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh---HHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~~~~~~~~~~~d~vi   77 (287)
                      +|++|-+|..+++.+...|.+|++++++..... .+..          .++.. ..+..+.   +.+.......++|.++
T Consensus       146 ~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~-~~~~----------~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (323)
T cd05276         146 HGGASGVGTAAIQLAKALGARVIATAGSEEKLE-ACRA----------LGADV-AINYRTEDFAEEVKEATGGRGVDVIL  213 (323)
T ss_pred             EcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHHH----------cCCCE-EEeCCchhHHHHHHHHhCCCCeEEEE
Confidence            488999999999999999999999988755421 1110          11211 1222222   2233333334799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ++++...  ....++.+....+++.++.
T Consensus       214 ~~~g~~~--~~~~~~~~~~~g~~i~~~~  239 (323)
T cd05276         214 DMVGGDY--LARNLRALAPDGRLVLIGL  239 (323)
T ss_pred             ECCchHH--HHHHHHhhccCCEEEEEec
Confidence            9987432  4445555554457776664

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=90.89  E-value=2.1  Score=36.08  Aligned_cols=67  Identities=13%  Similarity=0.052  Sum_probs=43.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |-|.+|+++++.|...|++|++..|..... +...          ..+++.        .++.++++  ++|+|+.+..-
T Consensus        23 G~GsIG~amA~nL~d~G~~ViV~~r~~~s~-~~A~----------~~G~~v--------~sl~Eaak--~ADVV~llLPd   81 (335)
T PRK13403         23 GYGSQGHAQAQNLRDSGVEVVVGVRPGKSF-EVAK----------ADGFEV--------MSVSEAVR--TAQVVQMLLPD   81 (335)
T ss_pred             eEcHHHHHHHHHHHHCcCEEEEEECcchhh-HHHH----------HcCCEE--------CCHHHHHh--cCCEEEEeCCC
Confidence            568999999999999999999987653221 1111          123322        14667787  89998877653


Q ss_pred             CcccHHHHHH
Q 023110           83 EADEVEPILD   92 (287)
Q Consensus        83 ~~~~~~~ll~   92 (287)
                        ..+..++.
T Consensus        82 --~~t~~V~~   89 (335)
T PRK13403         82 --EQQAHVYK   89 (335)
T ss_pred             --hHHHHHHH
Confidence              33455553

>PRK08223 hypothetical protein; Validated

Probab=90.88  E-value=3.6  Score=34.05  Aligned_cols=105  Identities=12%  Similarity=0.013  Sum_probs=61.6

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCcccc---cc-C---CCC-------ChhhhhhhcCCeEE--EEecCCChHHHH
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIA---QQ-L---PGE-------SDQEFAEFSSKILH--LKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~---~~-~---~~~-------~~~~~~~~~~~~~~--i~~D~~d~~~~~   65 (287)
                      |.|-+|+.++..|...|. +++.++.+.-...   .+ +   ...       ....+.++.+.+++  +...+. ++.+.
T Consensus        34 G~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~l~-~~n~~  112 (287)
T PRK08223         34 GLGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEGIG-KENAD  112 (287)
T ss_pred             CCCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEecccC-ccCHH
Confidence            578899999999999985 6777776543211   01 1   011       11222333444443  444443 44567


Q ss_pred             hhhhcCCccEEEecCCCCcccHHH-HHHhCC-CCccEEEEecceeec
Q 023110           66 SSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~-ll~~~~-~~~~~i~~Ss~~v~~  110 (287)
                      ++++  ++|+|+++.......++. +-++|. ..+++|+.|..+..|
T Consensus       113 ~ll~--~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP~V~~~~~g~~g  157 (287)
T PRK08223        113 AFLD--GVDVYVDGLDFFEFDARRLVFAACQQRGIPALTAAPLGMGT  157 (287)
T ss_pred             HHHh--CCCEEEECCCCCcHHHHHHHHHHHHHcCCCEEEEeccCCeE
Confidence            7888  899999887542223444 445566 557888876555433

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=90.86  E-value=0.86  Score=37.96  Aligned_cols=29  Identities=17%  Similarity=0.154  Sum_probs=26.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |+|.+|..++..|+..|++|++.++++..
T Consensus        11 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   39 (292)
T PRK07530         11 GAGQMGNGIAHVCALAGYDVLLNDVSADR   39 (292)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            57999999999999999999999998765

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=90.84  E-value=0.69  Score=38.81  Aligned_cols=80  Identities=21%  Similarity=0.298  Sum_probs=52.1

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEE-----EecCCChHHHHhhhhcCCccEEE
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-----KGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i-----~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      |+|--|++|+..|.+.||+|+...|++....+....         ..+..+.     ..++.-..++.++++  ++|.|+
T Consensus         8 GaGswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~---------~~N~~yLp~i~lp~~l~at~Dl~~a~~--~ad~iv   76 (329)
T COG0240           8 GAGSWGTALAKVLARNGHEVRLWGRDEEIVAEINET---------RENPKYLPGILLPPNLKATTDLAEALD--GADIIV   76 (329)
T ss_pred             cCChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhc---------CcCccccCCccCCcccccccCHHHHHh--cCCEEE
Confidence            578889999999999999999999987653221111         1122222     233344567888887  799888


Q ss_pred             ecCCCCcccHHHHHHhCC
Q 023110           78 DINGREADEVEPILDALP   95 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~   95 (287)
                      -..  +....+.+++.++
T Consensus        77 ~av--Ps~~~r~v~~~l~   92 (329)
T COG0240          77 IAV--PSQALREVLRQLK   92 (329)
T ss_pred             EEC--ChHHHHHHHHHHh
Confidence            754  3455555555543

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=90.78  E-value=2.8  Score=36.29  Aligned_cols=103  Identities=17%  Similarity=0.194  Sum_probs=61.5

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCcccc---cc-C---CCCC-------hhhhhhhcCC--eEEEEecCCChHHHH
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIA---QQ-L---PGES-------DQEFAEFSSK--ILHLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~---~~-~---~~~~-------~~~~~~~~~~--~~~i~~D~~d~~~~~   65 (287)
                      |.|-+|..++..|...|. ++++++.+.-...   .+ +   .+..       ...+.+..+.  ++.+...+ +.+.+.
T Consensus        48 G~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i-~~~~~~  126 (370)
T PRK05600         48 GAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRERL-TAENAV  126 (370)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeeeec-CHHHHH
Confidence            678899999999999985 8888887642211   11 0   0000       1122222333  44444444 345677


Q ss_pred             hhhhcCCccEEEecCCCCcccHHHHH-HhCC-CCccEEEEecceeec
Q 023110           66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~ll-~~~~-~~~~~i~~Ss~~v~~  110 (287)
                      ++++  ++|+||.|...  ..++.++ ++|. ...++|+.+..+.+|
T Consensus       127 ~~~~--~~DlVid~~Dn--~~~r~~in~~~~~~~iP~v~~~~~g~~G  169 (370)
T PRK05600        127 ELLN--GVDLVLDGSDS--FATKFLVADAAEITGTPLVWGTVLRFHG  169 (370)
T ss_pred             HHHh--CCCEEEECCCC--HHHHHHHHHHHHHcCCCEEEEEEecCEE
Confidence            7888  89999998753  3344444 4454 556788777655444

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=90.77  E-value=2  Score=35.93  Aligned_cols=91  Identities=14%  Similarity=0.118  Sum_probs=56.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh---HHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~~~~~~~~~~~d~vi   77 (287)
                      .|++|.+|..+++.+...|.+|++++++..+.. .+++          -+++. ..+..+.   +.+.......++|.|+
T Consensus       145 ~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~----------~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vl  212 (323)
T cd05282         145 NAANSAVGRMLIQLAKLLGFKTINVVRRDEQVE-ELKA----------LGADE-VIDSSPEDLAQRVKEATGGAGARLAL  212 (323)
T ss_pred             cccccHHHHHHHHHHHHCCCeEEEEecChHHHH-HHHh----------cCCCE-EecccchhHHHHHHHHhcCCCceEEE
Confidence            478999999999999999999999888765421 1111          12211 1122222   2233333334799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ++.+.  ......++.++...+++.++.
T Consensus       213 ~~~g~--~~~~~~~~~l~~~g~~v~~g~  238 (323)
T cd05282         213 DAVGG--ESATRLARSLRPGGTLVNYGL  238 (323)
T ss_pred             ECCCC--HHHHHHHHhhCCCCEEEEEcc
Confidence            99874  234556666665567776654

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PLN03139 formate dehydrogenase; Provisional

Probab=90.68  E-value=0.55  Score=40.70  Aligned_cols=84  Identities=13%  Similarity=0.029  Sum_probs=50.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|++.+|...... ...          ..++.       -.+++.++++  .+|+|+.+...
T Consensus       206 G~G~IG~~vA~~L~afG~~V~~~d~~~~~~~-~~~----------~~g~~-------~~~~l~ell~--~sDvV~l~lPl  265 (386)
T PLN03139        206 GAGRIGRLLLQRLKPFNCNLLYHDRLKMDPE-LEK----------ETGAK-------FEEDLDAMLP--KCDVVVINTPL  265 (386)
T ss_pred             eecHHHHHHHHHHHHCCCEEEEECCCCcchh-hHh----------hcCce-------ecCCHHHHHh--hCCEEEEeCCC
Confidence            5799999999999999999999888643211 000          01221       1124667777  78988866542


Q ss_pred             CcccHHHH-----HHhCCCCccEEEEecce
Q 023110           83 EADEVEPI-----LDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~~~~~l-----l~~~~~~~~~i~~Ss~~  107 (287)
                       ...++.+     +..++...-||.++-..
T Consensus       266 -t~~T~~li~~~~l~~mk~ga~lIN~aRG~  294 (386)
T PLN03139        266 -TEKTRGMFNKERIAKMKKGVLIVNNARGA  294 (386)
T ss_pred             -CHHHHHHhCHHHHhhCCCCeEEEECCCCc
Confidence             3344444     34454445666665444

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=90.67  E-value=1  Score=38.88  Aligned_cols=26  Identities=23%  Similarity=0.164  Sum_probs=23.5

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRG   28 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~   28 (287)
                      |.|.||+.+++.|...|++|.+.++.
T Consensus       123 G~G~IG~~vA~~l~a~G~~V~~~dp~  148 (378)
T PRK15438        123 GVGNVGRRLQARLEALGIKTLLCDPP  148 (378)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCc
Confidence            67999999999999999999998753

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=90.62  E-value=1.1  Score=33.40  Aligned_cols=68  Identities=21%  Similarity=0.233  Sum_probs=45.6

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh-------HHHHhhhhcCCcc
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-------DFVKSSLSAKGFD   74 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~-------~~~~~~~~~~~~d   74 (287)
                      |+-|-+|+++++.+..++|-|.-++...+...               +.-.++.+|-.-.       +.+.+.+...++|
T Consensus        10 GGkGALGSacv~~FkannywV~siDl~eNe~A---------------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvD   74 (236)
T KOG4022|consen   10 GGKGALGSACVEFFKANNYWVLSIDLSENEQA---------------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVD   74 (236)
T ss_pred             cCcchHhHHHHHHHHhcCeEEEEEeecccccc---------------cceEEecCCcchhHHHHHHHHHHHHhhcccccc
Confidence            88999999999999999999998888766521               1112223332212       2233445556899


Q ss_pred             EEEecCCCCc
Q 023110           75 VVYDINGREA   84 (287)
Q Consensus        75 ~vi~~a~~~~   84 (287)
                      .||+.||-..
T Consensus        75 av~CVAGGWA   84 (236)
T KOG4022|consen   75 AVFCVAGGWA   84 (236)
T ss_pred             eEEEeecccc
Confidence            9999987643

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=90.61  E-value=1.7  Score=36.65  Aligned_cols=91  Identities=16%  Similarity=0.224  Sum_probs=56.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCe-EEEEecCCChH---HHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYD---FVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~D~~d~~---~~~~~~~~~~~d~v   76 (287)
                      .|++|.+|..+++.+...|.+|++++++..... .+.+         .-++ .++  +..+.+   .+..... .++|++
T Consensus       152 ~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~-~~~~---------~~g~~~~~--~~~~~~~~~~v~~~~~-~~~d~v  218 (329)
T cd05288         152 SAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCR-WLVE---------ELGFDAAI--NYKTPDLAEALKEAAP-DGIDVY  218 (329)
T ss_pred             ecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHh---------hcCCceEE--ecCChhHHHHHHHhcc-CCceEE
Confidence            478999999999999999999999988765421 1110         0112 122  222322   2232322 379999


Q ss_pred             EecCCCCcccHHHHHHhCCCCccEEEEecc
Q 023110           77 YDINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                      +++.+.  ......++.++...+++.+++.
T Consensus       219 i~~~g~--~~~~~~~~~l~~~G~~v~~g~~  246 (329)
T cd05288         219 FDNVGG--EILDAALTLLNKGGRIALCGAI  246 (329)
T ss_pred             EEcchH--HHHHHHHHhcCCCceEEEEeec
Confidence            999873  3455666677644578777653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK06932 glycerate dehydrogenase; Provisional

Probab=90.53  E-value=0.97  Score=38.10  Aligned_cols=79  Identities=16%  Similarity=0.167  Sum_probs=48.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-||+.+++.|...|.+|++.+|.....   .             .        ....++.++++  .+|+|+.+...
T Consensus       154 G~G~IG~~va~~l~~fg~~V~~~~~~~~~~---~-------------~--------~~~~~l~ell~--~sDiv~l~~Pl  207 (314)
T PRK06932        154 GKGCLGTEVGRLAQALGMKVLYAEHKGASV---C-------------R--------EGYTPFEEVLK--QADIVTLHCPL  207 (314)
T ss_pred             CCCHHHHHHHHHHhcCCCEEEEECCCcccc---c-------------c--------cccCCHHHHHH--hCCEEEEcCCC
Confidence            579999999999999999999987643210   0             0        01234777787  78887755443


Q ss_pred             CcccHHH-----HHHhCCCCccEEEEeccee
Q 023110           83 EADEVEP-----ILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~~~~~-----ll~~~~~~~~~i~~Ss~~v  108 (287)
                      + ..++.     .++.++....||.+|=..+
T Consensus       208 t-~~T~~li~~~~l~~mk~ga~lIN~aRG~~  237 (314)
T PRK06932        208 T-ETTQNLINAETLALMKPTAFLINTGRGPL  237 (314)
T ss_pred             C-hHHhcccCHHHHHhCCCCeEEEECCCccc
Confidence            2 22333     4444554456666664443

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=90.49  E-value=0.31  Score=40.30  Aligned_cols=29  Identities=31%  Similarity=0.297  Sum_probs=26.3

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|.+++..|.+.|++|++.+|++..
T Consensus         7 G~G~mG~sla~~L~~~g~~V~~~d~~~~~   35 (279)
T PRK07417          7 GLGLIGGSLGLDLRSLGHTVYGVSRREST   35 (279)
T ss_pred             eecHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            47999999999999999999999998655

>COG4091 Predicted homoserine dehydrogenase [Amino acid transport and metabolism]

Probab=90.44  E-value=1  Score=37.97  Aligned_cols=92  Identities=15%  Similarity=0.179  Sum_probs=55.8

Q ss_pred             cccchHHHHHHHHHHc-CCeEEEEE-cCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHH---------------H
Q 023110            3 GTRFIGVFLSRLLVKE-GHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV---------------K   65 (287)
Q Consensus         3 atG~iG~~l~~~l~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~---------------~   65 (287)
                      |+|++|+-++.|.... |.+|.+++ |+........+.-       ..+..+.+..  .+....               .
T Consensus        24 GAG~mG~~ivtQi~~m~Gm~vvaisd~~~~~ak~A~~~a-------g~~~~~~~e~--~~~s~~a~Ai~aGKi~vT~D~~   94 (438)
T COG4091          24 GAGEMGTGIVTQIASMPGMEVVAISDRNLDAAKRAYDRA-------GGPKIEAVEA--DDASKMADAIEAGKIAVTDDAE   94 (438)
T ss_pred             cccccchHHHHHHhhcCCceEEEEecccchHHHHHHHHh-------cCCccccccc--chhhHHHHHHhcCcEEEecchh
Confidence            6899999999999875 89999887 4443322211100       0112222222  122222               2


Q ss_pred             hhhhcCCccEEEecCCCCcccHHHHHHhCCCCccEEEE
Q 023110           66 SSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYC  103 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~~~~~~i~~  103 (287)
                      .++....+|+||...|....+.+-.++++...|++|.+
T Consensus        95 ~i~~~~~IdvIIdATG~p~vGA~~~l~Ai~h~KHlVMm  132 (438)
T COG4091          95 LIIANDLIDVIIDATGVPEVGAKIALEAILHGKHLVMM  132 (438)
T ss_pred             hhhcCCcceEEEEcCCCcchhhHhHHHHHhcCCeEEEE
Confidence            23333368999999999888888888887755666644

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=90.39  E-value=1.5  Score=37.95  Aligned_cols=88  Identities=15%  Similarity=0.159  Sum_probs=55.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|.+|..+++.+...|.+|++++++.+...+..++          -+++.+ .|..+.+.+.+...  ++|+||++.|.
T Consensus       186 G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~----------lGa~~~-i~~~~~~~v~~~~~--~~D~vid~~G~  252 (375)
T PLN02178        186 GLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDR----------LGADSF-LVTTDSQKMKEAVG--TMDFIIDTVSA  252 (375)
T ss_pred             cccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHh----------CCCcEE-EcCcCHHHHHHhhC--CCcEEEECCCc
Confidence            458999999999999999999988775432111111          133322 23333444555443  79999999874


Q ss_pred             CcccHHHHHHhCCCCccEEEEe
Q 023110           83 EADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      . ......++.++...+++.++
T Consensus       253 ~-~~~~~~~~~l~~~G~iv~vG  273 (375)
T PLN02178        253 E-HALLPLFSLLKVSGKLVALG  273 (375)
T ss_pred             H-HHHHHHHHhhcCCCEEEEEc
Confidence            3 23455666666446777665

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=90.34  E-value=1.2  Score=40.12  Aligned_cols=91  Identities=16%  Similarity=0.165  Sum_probs=59.3

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC-------------hHH------
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-------------YDF------   63 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d-------------~~~------   63 (287)
                      |.|.+|...+..+...|..|++++++..... ..+          .-+.+++..|..+             .+.      
T Consensus       171 GaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle-~a~----------~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~  239 (511)
T TIGR00561       171 GAGVAGLAAIGAANSLGAIVRAFDTRPEVKE-QVQ----------SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME  239 (511)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH----------HcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence            4699999999999999999999999876521 111          1234444444311             111      


Q ss_pred             -HHhhhhcCCccEEEecC---CC--CcccHHHHHHhCCCCccEEEEecc
Q 023110           64 -VKSSLSAKGFDVVYDIN---GR--EADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        64 -~~~~~~~~~~d~vi~~a---~~--~~~~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                       +.+..+  ++|+||+++   |.  ...-++..++.++....+|-+|..
T Consensus       240 ~~~e~~~--~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d  286 (511)
T TIGR00561       240 LFAAQAK--EVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE  286 (511)
T ss_pred             HHHHHhC--CCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence             333344  899999998   32  223577888888844567777753

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=90.33  E-value=1.1  Score=40.29  Aligned_cols=93  Identities=13%  Similarity=0.119  Sum_probs=52.2

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCC----C-----ChhhhhhhcC---CeEEEEecCCChHHHHhhh--
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG----E-----SDQEFAEFSS---KILHLKGDRKDYDFVKSSL--   68 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~----~-----~~~~~~~~~~---~~~~i~~D~~d~~~~~~~~--   68 (287)
                      |.|-+|+.+++.|+++|++|.+..|++++.......    .     .-....+...   +.+.|..-+.+.+.+++++  
T Consensus        13 GLG~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~~aV~~Vi~g   92 (493)
T PLN02350         13 GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAGAPVDQTIKA   92 (493)
T ss_pred             eeHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCcHHHHHHHHH
Confidence            578999999999999999999999987763321110    0     0000111111   1333444444444443332  


Q ss_pred             --hcC-CccEEEecCCCCcccHHHHHHhCC
Q 023110           69 --SAK-GFDVVYDINGREADEVEPILDALP   95 (287)
Q Consensus        69 --~~~-~~d~vi~~a~~~~~~~~~ll~~~~   95 (287)
                        ... .=|+||++.......+..+.+.++
T Consensus        93 l~~~l~~G~iiID~sT~~~~~t~~~~~~l~  122 (493)
T PLN02350         93 LSEYMEPGDCIIDGGNEWYENTERRIKEAA  122 (493)
T ss_pred             HHhhcCCCCEEEECCCCCHHHHHHHHHHHH
Confidence              111 235677776666666666666654

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=90.32  E-value=0.75  Score=34.84  Aligned_cols=47  Identities=23%  Similarity=0.320  Sum_probs=34.2

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |+++.+|..+++.|.++|.+|++..|+.                                +.+.+.+.  ++|+||.+.+
T Consensus        51 G~G~~~G~~~a~~L~~~g~~V~v~~r~~--------------------------------~~l~~~l~--~aDiVIsat~   96 (168)
T cd01080          51 GRSNIVGKPLAALLLNRNATVTVCHSKT--------------------------------KNLKEHTK--QADIVIVAVG   96 (168)
T ss_pred             CCcHHHHHHHHHHHhhCCCEEEEEECCc--------------------------------hhHHHHHh--hCCEEEEcCC
Confidence            5555678888888888888877777652                                23556666  8899998876


Q ss_pred             C
Q 023110           82 R   82 (287)
Q Consensus        82 ~   82 (287)
                      .
T Consensus        97 ~   97 (168)
T cd01080          97 K   97 (168)
T ss_pred             C
Confidence            5

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=90.14  E-value=3.1  Score=34.97  Aligned_cols=106  Identities=18%  Similarity=0.218  Sum_probs=64.2

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCC-------CC-------hhhhhhhcC--CeEEEEecCCChHHHH
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG-------ES-------DQEFAEFSS--KILHLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~-------~~-------~~~~~~~~~--~~~~i~~D~~d~~~~~   65 (287)
                      |.|-+|.++++.|...|. ++++++.+.-.....-++       ..       ...+.++.+  .++.+..++.+.....
T Consensus         6 GaGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~~~~~~   85 (312)
T cd01489           6 GAGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKDPDFNV   85 (312)
T ss_pred             CCCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCCccchH
Confidence            569999999999999985 677777664331111110       00       111122223  3455666776644445


Q ss_pred             hhhhcCCccEEEecCCCCcccHHHHHHhCC-CCccEEEEecceeecc
Q 023110           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~  111 (287)
                      +.++  ++|+||.+.. +...-..+-+.|. ....||..++.+.+|.
T Consensus        86 ~f~~--~~DvVv~a~D-n~~ar~~in~~c~~~~ip~I~~gt~G~~G~  129 (312)
T cd01489          86 EFFK--QFDLVFNALD-NLAARRHVNKMCLAADVPLIESGTTGFLGQ  129 (312)
T ss_pred             HHHh--cCCEEEECCC-CHHHHHHHHHHHHHCCCCEEEEecCcceeE
Confidence            6777  8999999875 3443334445565 5678888877776653

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=90.04  E-value=1.2  Score=36.74  Aligned_cols=89  Identities=13%  Similarity=0.128  Sum_probs=51.7

Q ss_pred             ccchHHHHHHHHHHcCCe-EEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC-hHHHHhhhhcCCccEEEecCC
Q 023110            4 TRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d-~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      .|.+|...++.+...|.+ |+++++++.+. +..++          -+++.+ .|..+ .+.+.+.....++|+||++.|
T Consensus       129 ~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~-~~a~~----------~Ga~~~-i~~~~~~~~~~~~~~~~g~d~vid~~G  196 (280)
T TIGR03366       129 AGMLGLTAAAAAAAAGAARVVAADPSPDRR-ELALS----------FGATAL-AEPEVLAERQGGLQNGRGVDVALEFSG  196 (280)
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHH----------cCCcEe-cCchhhHHHHHHHhCCCCCCEEEECCC
Confidence            488999999988888986 88877665442 11110          122221 12222 222333333347999999987


Q ss_pred             CCcccHHHHHHhCCCCccEEEEec
Q 023110           82 READEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        82 ~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      .. ......++.++...+++.++.
T Consensus       197 ~~-~~~~~~~~~l~~~G~iv~~G~  219 (280)
T TIGR03366       197 AT-AAVRACLESLDVGGTAVLAGS  219 (280)
T ss_pred             Ch-HHHHHHHHHhcCCCEEEEecc
Confidence            42 234556677775567777664

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=90.03  E-value=0.59  Score=41.71  Aligned_cols=30  Identities=17%  Similarity=0.367  Sum_probs=27.3

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~   32 (287)
                      |.|-+|+.+++.|.++|++|.+.+|+++..
T Consensus         8 GLG~MG~~lA~nL~~~G~~V~v~dr~~~~~   37 (470)
T PTZ00142          8 GLAVMGQNLALNIASRGFKISVYNRTYEKT   37 (470)
T ss_pred             eEhHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            578999999999999999999999998763

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=90.02  E-value=1.8  Score=36.07  Aligned_cols=28  Identities=29%  Similarity=0.459  Sum_probs=25.1

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~   30 (287)
                      |.|.+|..+++.|++.|++|.+.+|++.
T Consensus         7 GlG~MG~~ma~~L~~~G~~v~v~~~~~~   34 (292)
T PRK15059          7 GLGIMGTPMAINLARAGHQLHVTTIGPV   34 (292)
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEeCCHh
Confidence            5799999999999999999999888753

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=89.83  E-value=1.5  Score=37.35  Aligned_cols=91  Identities=22%  Similarity=0.223  Sum_probs=56.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|++|.+|..+++.+...|.+|++++++. . ...++.          -++.. ..|..+.+....+....++|.++++.
T Consensus       169 ~g~~g~ig~~~~~~a~~~G~~v~~~~~~~-~-~~~~~~----------~g~~~-~~~~~~~~~~~~l~~~~~vd~vi~~~  235 (350)
T cd08248         169 LGGSGGVGTFAIQLLKAWGAHVTTTCSTD-A-IPLVKS----------LGADD-VIDYNNEDFEEELTERGKFDVILDTV  235 (350)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCcc-h-HHHHHH----------hCCce-EEECCChhHHHHHHhcCCCCEEEECC
Confidence            47899999999999999999999888652 2 111110          11211 12333333333333334799999998


Q ss_pred             CCCcccHHHHHHhCCCCccEEEEecc
Q 023110           81 GREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        81 ~~~~~~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                      +..  .....++.+....+++.++..
T Consensus       236 g~~--~~~~~~~~l~~~G~~v~~g~~  259 (350)
T cd08248         236 GGD--TEKWALKLLKKGGTYVTLVSP  259 (350)
T ss_pred             ChH--HHHHHHHHhccCCEEEEecCC
Confidence            743  455666777655788877643

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit

Probab=89.82  E-value=2.2  Score=38.06  Aligned_cols=71  Identities=11%  Similarity=0.000  Sum_probs=45.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEE-----ecCCChHHHHhhhhcCCccEEE
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK-----GDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      +.|.++..+++.+.+.|++|++++.+.........-         .+....+.     -+..|.+.+.++.++.++|+|+
T Consensus         9 g~g~~~~~~~~aa~~lG~~vv~~~~~~d~~a~~~~~---------aD~~~~~~~~~~~~~y~d~~~l~~~a~~~~id~I~   79 (449)
T TIGR00514         9 NRGEIALRILRACKELGIKTVAVHSTADRDALHVLL---------ADEAVCIGPAPSAKSYLNIPNIISAAEITGADAIH   79 (449)
T ss_pred             CCCHHHHHHHHHHHHcCCeEEEEEChhhhccccccc---------CCEEEEcCCCCchhchhCHHHHHHHHHHhCCCEEE
Confidence            578999999999999999999997653321111100         12111110     1345566777777778999999


Q ss_pred             ecCCC
Q 023110           78 DINGR   82 (287)
Q Consensus        78 ~~a~~   82 (287)
                      -..+.
T Consensus        80 pg~g~   84 (449)
T TIGR00514        80 PGYGF   84 (449)
T ss_pred             eCCCc
Confidence            76643

This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.

>PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional

Probab=89.78  E-value=1.8  Score=38.73  Aligned_cols=70  Identities=11%  Similarity=-0.011  Sum_probs=46.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEe------cCCChHHHHhhhhcCCccEE
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG------DRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~------D~~d~~~~~~~~~~~~~d~v   76 (287)
                      +.|.++..+++.+.+.|+++++++.+.+.......         ..+.. +..+      |..|.+.+.++.+..++|+|
T Consensus        12 ~~geia~~ii~aa~~lG~~~v~~~s~~d~~~~~~~---------~aD~~-~~i~p~~~~~~y~d~~~i~~~a~~~~~daI   81 (467)
T PRK12833         12 NRGEIAVRIIRAARELGMRTVAACSDADRDSLAAR---------MADEA-VHIGPSHAAKSYLNPAAILAAARQCGADAI   81 (467)
T ss_pred             CCcHHHHHHHHHHHHcCCeEEEEECCCCCCChhHH---------hCCEE-EecCCCCccccccCHHHHHHHHHHhCCCEE
Confidence            46899999999999999999988754332110100         01111 1112      56678888888888899999


Q ss_pred             EecCCC
Q 023110           77 YDINGR   82 (287)
Q Consensus        77 i~~a~~   82 (287)
                      +-..+.
T Consensus        82 ~pg~g~   87 (467)
T PRK12833         82 HPGYGF   87 (467)
T ss_pred             EECCCc
Confidence            865543

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=89.70  E-value=1.2  Score=37.90  Aligned_cols=89  Identities=13%  Similarity=0.092  Sum_probs=53.5

Q ss_pred             ccchHHHHHHHHHHcCCe-EEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC--hHHHHhhhhcCCccEEEecC
Q 023110            4 TRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d--~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|.+|..+++.+...|.+ |+++++++.+.. ...+          -++..+ .|..+  .+.+.+.....++|+||++.
T Consensus       172 ~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~-~~~~----------~ga~~~-i~~~~~~~~~~~~~~~~~~~d~vid~~  239 (339)
T cd08239         172 AGPVGLGALMLARALGAEDVIGVDPSPERLE-LAKA----------LGADFV-INSGQDDVQEIRELTSGAGADVAIECS  239 (339)
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHH----------hCCCEE-EcCCcchHHHHHHHhCCCCCCEEEECC
Confidence            489999999999999988 999888765521 1110          122221 23323  33344444334799999998


Q ss_pred             CCCcccHHHHHHhCCCCccEEEEec
Q 023110           81 GREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +... .....++.++...+++.++.
T Consensus       240 g~~~-~~~~~~~~l~~~G~~v~~g~  263 (339)
T cd08239         240 GNTA-ARRLALEAVRPWGRLVLVGE  263 (339)
T ss_pred             CCHH-HHHHHHHHhhcCCEEEEEcC
Confidence            7432 22445666664457776664

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=89.59  E-value=1.4  Score=38.14  Aligned_cols=26  Identities=27%  Similarity=0.319  Sum_probs=23.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRG   28 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~   28 (287)
                      |.|.||+.+++.|...|++|++.++.
T Consensus       123 G~G~IG~~va~~l~a~G~~V~~~Dp~  148 (381)
T PRK00257        123 GAGHVGGRLVRVLRGLGWKVLVCDPP  148 (381)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCc
Confidence            67999999999999999999998764

>cd08230 glucose_DH Glucose dehydrogenase

Probab=89.52  E-value=1.2  Score=38.12  Aligned_cols=88  Identities=19%  Similarity=0.197  Sum_probs=51.8

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCC---ccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      | +|.+|...++.+...|.+|++++|+.   .+ .+..+          .-+++++  |..+.+ +.+.....++|+||.
T Consensus       180 G-~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~-~~~~~----------~~Ga~~v--~~~~~~-~~~~~~~~~~d~vid  244 (355)
T cd08230         180 G-AGPIGLLAALLLRLRGFEVYVLNRRDPPDPK-ADIVE----------ELGATYV--NSSKTP-VAEVKLVGEFDLIIE  244 (355)
T ss_pred             C-CCHHHHHHHHHHHHcCCeEEEEecCCCCHHH-HHHHH----------HcCCEEe--cCCccc-hhhhhhcCCCCEEEE
Confidence            5 59999999988888899999999853   22 11111          1234433  332221 111111237999999


Q ss_pred             cCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           79 INGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +.|... .....++.++...+++.++.
T Consensus       245 ~~g~~~-~~~~~~~~l~~~G~~v~~G~  270 (355)
T cd08230         245 ATGVPP-LAFEALPALAPNGVVILFGV  270 (355)
T ss_pred             CcCCHH-HHHHHHHHccCCcEEEEEec
Confidence            998432 34556666774446766654

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=89.49  E-value=0.25  Score=40.89  Aligned_cols=30  Identities=17%  Similarity=0.287  Sum_probs=27.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~   32 (287)
                      |+|.+|..++..|+..|++|+++++++...
T Consensus        10 G~G~mG~~ia~~la~~g~~V~~~d~~~~~~   39 (282)
T PRK05808         10 GAGTMGNGIAQVCAVAGYDVVMVDISDAAV   39 (282)
T ss_pred             ccCHHHHHHHHHHHHCCCceEEEeCCHHHH
Confidence            579999999999999999999999887653

>PRK06111 acetyl-CoA carboxylase biotin carboxylase subunit; Validated

Probab=89.32  E-value=2.5  Score=37.58  Aligned_cols=70  Identities=11%  Similarity=0.034  Sum_probs=47.5

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEE-----EecCCChHHHHhhhhcCCccEEE
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-----KGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i-----~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      ++|.+|..+++.+.+.|++|++++.+.......+..         .+....+     ..|..|.+.+.++.++.++|+|+
T Consensus         9 g~g~~~~~~~~~a~~lG~~~v~~~~~~~~~a~~~~~---------ad~~~~~~~~~~~~~~~d~~~l~~~~~~~~id~I~   79 (450)
T PRK06111          9 NRGEIAVRIIRTCQKLGIRTVAIYSEADRDALHVKM---------ADEAYLIGGPRVQESYLNLEKIIEIAKKTGAEAIH   79 (450)
T ss_pred             CCcHHHHHHHHHHHHcCCeEEEEechhhccCcchhh---------CCEEEEcCCCCccccccCHHHHHHHHHHhCCCEEE
Confidence            578999999999999999999998654432111100         1111111     34667888888888888999998


Q ss_pred             ecCC
Q 023110           78 DING   81 (287)
Q Consensus        78 ~~a~   81 (287)
                      -..+
T Consensus        80 p~~~   83 (450)
T PRK06111         80 PGYG   83 (450)
T ss_pred             eCCC
Confidence            6543

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=89.32  E-value=1.9  Score=36.00  Aligned_cols=90  Identities=21%  Similarity=0.195  Sum_probs=56.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC-hHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d-~~~~~~~~~~~~~d~vi~~   79 (287)
                      .|++|.+|..+++.+...|.+|++++++.... +.+.          .-++..+..+-.+ .+.+...  ..++|.++++
T Consensus       149 ~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~-~~~~----------~~g~~~~~~~~~~~~~~i~~~--~~~~d~vl~~  215 (320)
T cd08243         149 RGGTSSVGLAALKLAKALGATVTATTRSPERA-ALLK----------ELGADEVVIDDGAIAEQLRAA--PGGFDKVLEL  215 (320)
T ss_pred             EcCCChHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHH----------hcCCcEEEecCccHHHHHHHh--CCCceEEEEC
Confidence            47899999999999999999999998886542 1111          1123333222111 2233333  3479999999


Q ss_pred             CCCCcccHHHHHHhCCCCccEEEEec
Q 023110           80 NGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        80 a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      .+.  ......++.+....+++.++.
T Consensus       216 ~~~--~~~~~~~~~l~~~g~~v~~g~  239 (320)
T cd08243         216 VGT--ATLKDSLRHLRPGGIVCMTGL  239 (320)
T ss_pred             CCh--HHHHHHHHHhccCCEEEEEcc
Confidence            873  345556666664457776664

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	287
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	2e-22
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	3e-22
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	1e-20
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	2e-20
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	1e-19
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	1e-19
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	1e-19
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	7e-19
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	5e-18
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	6e-18
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	1e-16
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	1e-16
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	3e-16
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	3e-16
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	2e-15
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	2e-15
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	7e-14
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	7e-14
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	1e-13
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	2e-13
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	3e-13
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	6e-13
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	2e-12
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	2e-12
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	9e-12
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	1e-11
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	2e-11
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	3e-11
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	3e-11
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	4e-11
1xq6_A	253	Unknown protein; structural genomics, protein stru	5e-11
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	6e-11
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	8e-11
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	1e-10
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	6e-10
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	9e-10
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	1e-09
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	3e-09
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	5e-09
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	7e-09
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	9e-09
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	9e-09
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	5e-08
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	7e-08
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	6e-07
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	2e-05
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	8e-05
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	9e-05

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 93.8 bits (234), Expect = 2e-22
 Identities = 51/270 (18%), Positives = 86/270 (31%), Gaps = 47/270 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GGT F+G ++   +  +G+   +       K                E+         D 
Sbjct: 9   GGTGFLGQYVVESIKNDGNTPIILTRSIGNK-----------AINDYEY------RVSDY 51

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-------LEQ--------FIYC 103
              D +         D V  +          I +   N        +          +Y 
Sbjct: 52  TLEDLIN---QLNDVDAVVHLAA-TRGSQGKISEFHDNEILTQNLYDACYENNISNIVYA 107

Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGP- 157
           S+   Y     LP  E +   P   +   KL  E +       KG+   +LR  ++YG  
Sbjct: 108 STISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFN 167

Query: 158 LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
              N +   FF +   G  + +  + +   +  + KD A++ +  L  EK S   FNI  
Sbjct: 168 EKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVS-GTFNIGS 226

Query: 218 EKYVTFDGLARACAKAAGFPEPELVHYNPK 247
              +T   +A     A G     L+  NP 
Sbjct: 227 GDALTNYEVANTINNAFGNK-DNLLVKNPN 255

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 93.5 bits (233), Expect = 3e-22
 Identities = 45/263 (17%), Positives = 73/263 (27%), Gaps = 43/263 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G   +R +   GH + L  R         P    Q  A    +      +  D+
Sbjct: 20  GATGLLGHHAARAIRAAGHDLVLIHR---------PSSQIQRLAYLEPEC--RVAEMLDH 68

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEP--------ILDAL--PNLEQFIYCSS 105
             ++ +L  +G D V           R   E              A     + + +Y  S
Sbjct: 69  AGLERAL--RGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126

Query: 106 AGVY-LKSDLLPHCETDTVDPKSRHKG-----KLNTES-VLE--SKGVNWTSLRPVYIYG 156
           A         LP  E    D     K      K   +    E    G+      P  + G
Sbjct: 127 AYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLG 186

Query: 157 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
            L+  P        +  G           V       +  R  +  L   +   + + ++
Sbjct: 187 ELDIGPTTGRVITAIGNGEMTHYVAGQRNVI---DAAEAGRGLLMALERGRIG-ERYLLT 242

Query: 217 GEKYVTFDGLARACAKAAGFPEP 239
           G   +    L R  A+  G P P
Sbjct: 243 GH-NLEMADLTRRIAELLGQPAP 264

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 87.1 bits (216), Expect = 1e-20
 Identities = 39/232 (16%), Positives = 68/232 (29%), Gaps = 41/232 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKD 60
           G + F+G  L    +  G +VT   R    I  +                L + K D   
Sbjct: 11  GASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEH-------------LKVKKADVSS 57

Query: 61  YDFVKSSLSAKGFDVVY---DINGREADEVEPILDALPNL---------EQFIYCSSAGV 108
            D V      KG D V    +      D  +  +     +          +F+    AG 
Sbjct: 58  LDEVCEVC--KGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGS 115

Query: 109 YLKSDLLPHCETDTVD----PKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
              +  L   ++  V     P  +  G+     +++ K ++W    P     P       
Sbjct: 116 LFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPG------ 169

Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
                       + +   G        V+D A A +  L + K  ++ F I 
Sbjct: 170 VRTGRYRLGKDDMIVDIVGNSHI---SVEDYAAAMIDELEHPKHHQERFTIG 218

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 88.5 bits (220), Expect = 2e-20
 Identities = 55/270 (20%), Positives = 90/270 (33%), Gaps = 46/270 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G    IG  ++ LL++ G +V     F  G+    + L    +  F         ++G  
Sbjct: 28  GICGQIGSHIAELLLERGDKVVGIDNFATGR---REHLKDHPNLTF---------VEGSI 75

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVE----PILDALPNL---------------EQ 99
            D+  V   +     D V  ++   A   +       D L N                 +
Sbjct: 76  ADHALVNQLIGDLQPDAV--VH--TAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGR 131

Query: 100 FIYCSSAGVY-LKSDLLPHCETDTVDPKSRHKG--KLNTESVLESKGVNWTSLRPVYIYG 156
           F+Y  +A  Y +K    P       +P +      K   E  LE  G+++ + R   + G
Sbjct: 132 FVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGLDFVTFRLANVVG 191

Query: 157 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
           P N +     FF RL  G+   +            VKDLARA V+ +  +      ++ S
Sbjct: 192 PRNVSGPLPIFFQRLSEGKKCFV---TKARRDFVFVKDLARATVRAV--DGVGHGAYHFS 246

Query: 217 GEKYVTFDGLARACAKAAGFPEPELVHYNP 246
               V    L  A  +A   P         
Sbjct: 247 SGTDVAIKELYDAVVEAMALPSYPEPEIRE 276

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 84.3 bits (208), Expect = 1e-19
 Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 29/222 (13%)

Query: 2   GGTRFIG-VFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G    I     + LL      +TL+ R                      ++  ++G  ++
Sbjct: 12  GAAGQIAQXLTATLLTYTDMHITLYGRQ--------LKTRIPPEIIDHERVTVIEGSFQN 63

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHC 118
              ++ ++     +VV+        ++  I+ AL   N+ + I  S AG+  +  +    
Sbjct: 64  PGXLEQAV--TNAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEK 121

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
            T    P S  +G+    +VL    +N+T LR  ++Y        E              
Sbjct: 122 WTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTDYEL-------IPEGAQ 174

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKAS---RQVFNISG 217
              + +        + + +A   +L     +   R    +  
Sbjct: 175 FNDAQV------SREAVVKAIFDILHAADETPFHRTSIGVGE 210

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 84.3 bits (208), Expect = 1e-19
 Identities = 39/232 (16%), Positives = 65/232 (28%), Gaps = 40/232 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  +       GH+VT   R    I Q                I  L+ D  D 
Sbjct: 7   GATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKD------------INILQKDIFDL 54

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL---------EQFIYCSSAGV-YLK 111
                       +VV D  G   DE E  + +L +L          + +    A    + 
Sbjct: 55  T----LSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQID 110

Query: 112 SDLLPHCETDTVDPKSRHKGKLNTESVLE-----SKGVNWTSLRPVYIYGPLNYNPVEEW 166
            D     E+  +     +         LE         +WT + P  ++ P       E 
Sbjct: 111 EDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEP------GER 164

Query: 167 FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
                     +     G        ++D A A +  +       + F ++G+
Sbjct: 165 TGDYQIGKDHLLFGSDGNSFI---SMEDYAIAVLDEIERPNHLNEHFTVAGK 213

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 85.1 bits (211), Expect = 1e-19
 Identities = 49/252 (19%), Positives = 83/252 (32%), Gaps = 38/252 (15%)

Query: 3   GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--------ESDQEFAEFSSKILHL 54
           G   +G+ L+R L  +GH+VT   R   P+   +          ++         +IL  
Sbjct: 10  GCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVY 69

Query: 55  KGDRKDYDFVKSSLSA-KGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLK 111
                        ++A +  D  Y ++  E   +   L AL    L+   + SS GVY +
Sbjct: 70  ------------CVAASEYSDEHYRLSYVEG--LRNTLSALEGAPLQHVFFVSSTGVYGQ 115

Query: 112 SDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
                  E      K    K  L  E++L     + T LR   IYGP     +      +
Sbjct: 116 EVEEWLDEDTPPIAKDFSGKRMLEAEALLA--AYSSTILRFSGIYGPGRLRMIR-----Q 168

Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGLAR 228
            +     P        T   H  D A     ++         +++ ++  + +    L R
Sbjct: 169 AQTPEQWPARN---AWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLR 225

Query: 229 ACAKAAGFPEPE 240
             A   G   P 
Sbjct: 226 WLADRQGIAYPA 237

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 83.8 bits (207), Expect = 7e-19
 Identities = 34/238 (14%), Positives = 76/238 (31%), Gaps = 16/238 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T +IG  +++  +  GH   L  R     +     +  + F    + I+H  G   D+
Sbjct: 11  GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH--GSIDDH 68

Query: 62  DFVKSSLSAKGFDVVYD-INGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
             +  ++  K  DVV   +   + +    I+ A+      +  + S  G           
Sbjct: 69  ASLVEAV--KNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGN------DVDN 120

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
                  KS  + K      +E++G+ +T +      G   +                + 
Sbjct: 121 VHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAG--YFLRSLAQAGLTAPPRDKVV 178

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKAAG 235
           I G G         +D+    ++ + + +   +   +      ++ + L     K   
Sbjct: 179 ILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID 236

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 79.7 bits (197), Expect = 5e-18
 Identities = 35/229 (15%), Positives = 68/229 (29%), Gaps = 44/229 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G+      V+ G++VT+  R  + +  + P       A        + GD    
Sbjct: 10  GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-----RPAHV------VVGDVLQA 58

Query: 62  DFVKSSLSAKGFDVVYDING--READEVEPILDALPNL---------EQFIYCSSAGVYL 110
             V  ++   G D V  + G   +      + +   N+         ++ + C+SA +  
Sbjct: 59  ADVDKTV--AGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW 116

Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
               +P       D   R         VL   G+ + ++ P      +   P+       
Sbjct: 117 DPTKVPPRLQAVTDDHIR------MHKVLRESGLKYVAVMP----PHIGDQPLTG----A 162

Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
                    P   I         DL    ++ L  ++        S + 
Sbjct: 163 YTVTLDGRGPSRVI------SKHDLGHFMLRCLTTDEYDGHSTYPSHQY 205

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 81.5 bits (202), Expect = 6e-18
 Identities = 55/288 (19%), Positives = 89/288 (30%), Gaps = 55/288 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G   FIG  L   L+K   +V     F  G       L         +  S    ++GD 
Sbjct: 34  GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQR---NLDEVRSLVSEKQWSNFKFIQGDI 90

Query: 59  KDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPNL----------- 97
           ++ D   ++    G D V            IN       +PI     N+           
Sbjct: 91  RNLDDCNNAC--AGVDYVLHQAALGSVPRSIN-------DPITSNATNIDGFLNMLIAAR 141

Query: 98  ----EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTS 148
               + F Y +S+  Y     LP  E     P S +   K   E   +      G +   
Sbjct: 142 DAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIG 201

Query: 149 LRPVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
           LR   ++G        Y  V   +   +  G  + I G G       ++++  +A +   
Sbjct: 202 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAA 261

Query: 204 -GNEKASRQVFNISGEKYVT----FDGLARACAKAAGFPEPELVHYNP 246
                A  QV+NI+     +    F  L    A+       E V+ + 
Sbjct: 262 TAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDF 309

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 77.6 bits (192), Expect = 1e-16
 Identities = 47/271 (17%), Positives = 92/271 (33%), Gaps = 55/271 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  +   L  E +++ +    + G     + +        A        +K D 
Sbjct: 8   GGAGFIGSHVVDKLS-ESNEIVVIDNLSSGNE---EFVNEA-----ARL------VKADL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
              D        KG + V+    + + R   E  P      N       LE        +
Sbjct: 53  AADDIKDY---LKGAEEVWHIAANPDVRIGAE-NPDEIYRNNVLATYRLLEAMRKAGVSR 108

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
            ++ S++ VY ++ ++P  E     P S +   KL  E+++     +  +     R   +
Sbjct: 109 IVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANV 168

Query: 155 YGP-LNYNPVEEWFFHRLKAGRPIPIPGSGIQV---TQLGHVKDLARAFVQVLGNEKASR 210
            G    +  + ++     +    + I G+G Q        ++ D   A +  L  ++   
Sbjct: 169 IGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYI---YISDCVDAMLFGLRGDERV- 224

Query: 211 QVFNISGEKYVTFDGLARACAKAAGF-PEPE 240
            +FNI  E  +    +A    +  G  P   
Sbjct: 225 NIFNIGSEDQIKVKRIAEIVCEELGLSPRFR 255

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 77.3 bits (190), Expect = 1e-16
 Identities = 33/267 (12%), Positives = 85/267 (31%), Gaps = 23/267 (8%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG  +    +  GH   +  R    ++     +    F +  +K++  +    D+
Sbjct: 11  GGTGYIGKRIVNASISLGHPTYVLFR-PEVVSNIDKVQMLLYFKQLGAKLI--EASLDDH 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVE-----PILDA---LPNLEQFIYCSSAGVYLKSD 113
             +  +L  K  DVV                  +++A     N+++F+            
Sbjct: 68  QRLVDAL--KQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDP---- 121

Query: 114 LLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA 173
                E            K      +E+  + +T +      G      + +   H +  
Sbjct: 122 --DIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYF-AGSLAQLDGHMMPP 178

Query: 174 GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAK 232
              + I G G          D+    ++ + + +   +   I      ++   + +   +
Sbjct: 179 RDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWER 238

Query: 233 AAGFPEPELVHYNPKEF-DFGKKKAFP 258
            +     + ++ + ++F    K K++ 
Sbjct: 239 LSE-QNLDKIYISSQDFLADMKDKSYE 264

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 76.4 bits (189), Expect = 3e-16
 Identities = 59/277 (21%), Positives = 97/277 (35%), Gaps = 52/277 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  L   LV+ G++V +    + G+    + +        AE          D 
Sbjct: 7   GGAGFIGSHLVDKLVELGYEVVVVDNLSSGRR---EFVNPS-----AEL------HVRDL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
           KDY +          DVV+    +   R +   EPI+    N       LE         
Sbjct: 53  KDYSWGA----GIKGDVVFHFAANPEVRLSTT-EPIVHFNENVVATFNVLEWARQTGVRT 107

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
            ++ SS+ VY  +D++P  E +   P S +   K   E +        GV   ++R   +
Sbjct: 108 VVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANV 167

Query: 155 YGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVL---GNEKASR 210
            GP   + V   F  +L+     + + G G Q     +V+D   A +          A  
Sbjct: 168 VGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPF 227

Query: 211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPK 247
              N+     V    +A+  A+  G      +   P 
Sbjct: 228 LALNVGNVDAVRVLDIAQIVAEVLGLRPE--IRLVPS 262

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 76.5 bits (188), Expect = 3e-16
 Identities = 45/240 (18%), Positives = 85/240 (35%), Gaps = 19/240 (7%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKD 60
           G T  IG  +    +K G+      R    I    P   ++    + S  ++ L+GD  D
Sbjct: 9   GPTGAIGRHIVWASIKAGNPTYALVR--KTITAANPETKEELIDNYQSLGVILLEGDIND 66

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVE-PILDALP--NLEQFIYCSSAGVYLKSDLLPH 117
           ++ +  ++  K  D+V    GR   E +  I+ A+      +  + S  G+         
Sbjct: 67  HETLVKAI--KQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGL-------DV 117

Query: 118 CETDTVDPKSR-HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
              D V+P  +  + K +   V+E++GV +T L      G   +                
Sbjct: 118 DRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTG--YFLRNLAQLDATDPPRDK 175

Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKAAG 235
           + I G G          D+    ++   +     +  +I   K Y+T + +     K  G
Sbjct: 176 VVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIG 235

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 74.4 bits (182), Expect = 2e-15
 Identities = 51/282 (18%), Positives = 87/282 (30%), Gaps = 54/282 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGH-----QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
           G T  IG  L+ +L          +V    R   P   +               I +++ 
Sbjct: 8   GVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNP------------INYVQC 55

Query: 57  DRKDYDFVKSSLSAKG-----FDVVYDINGREADEVEP-------ILDAL----PNLEQF 100
           D  D D  ++ LS        F V +     E +  E        +LDA+    PNL+  
Sbjct: 56  DISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHI 115

Query: 101 IYCSSAGVY---------LKSDLLPHCETDTVDPKSRHKGKLNT---ESVLESKGVNWTS 148
              +    Y         ++S   P+ E             L     E V + +G+ W+ 
Sbjct: 116 SLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSV 175

Query: 149 LRPVYIYGPLNYNPVEEWFFHRLKA------GRPIPIPGSGIQVTQLGHVKD---LARAF 199
            RP  I+G   Y+ +       + A      G+ +   G            D   +A   
Sbjct: 176 HRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHH 235

Query: 200 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPEL 241
           +    +  A  + FN+S      +    +  A+  G    E 
Sbjct: 236 IWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEY 277

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 72.9 bits (179), Expect = 2e-15
 Identities = 41/222 (18%), Positives = 85/222 (38%), Gaps = 34/222 (15%)

Query: 2   GGTRFIGVFL-SRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G    I   + ++L  K+  + TLF R  A I +  P           +    + GD  +
Sbjct: 30  GAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-----------TNSQIIMGDVLN 78

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEP--ILDALP--NLEQFIYCSSAGVYLKSDLLP 116
           +  +K ++  +G D+VY     E  +++   ++ A+   ++++ I+  S G+Y +     
Sbjct: 79  HAALKQAM--QGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKF 136

Query: 117 HCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
               + V      K        +E+ G+ +T LRP +    L    + ++        R 
Sbjct: 137 VEWNNAV-IGEPLKPFRRAADAIEASGLEYTILRPAW----LTDEDIIDYEL----TSRN 187

Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISG 217
            P  G+ +        K +A     ++   EK   +   I+ 
Sbjct: 188 EPFKGTIV------SRKSVAALITDIIDKPEKHIGENIGINQ 223

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 68.5 bits (168), Expect = 7e-14
 Identities = 28/232 (12%), Positives = 68/232 (29%), Gaps = 53/232 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +  +L   L  +GH+     R +     +L      +          +  + ++ 
Sbjct: 28  GANGKVARYLLSELKNKGHEPVAMVRNEEQ-GPELRERGASDI---------VVANLEE- 76

Query: 62  DFVKSSLSA--KGFDVVYDING--READEVEP----------ILDA--LPNLEQFIYCSS 105
                  S      D V    G        +            +       +++FI  SS
Sbjct: 77  -----DFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131

Query: 106 AGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEE 165
            G     D  P      ++ +     K   +  L+   +++T +RP              
Sbjct: 132 VGTV-DPDQGP------MNMRHYLVAKRLADDELKRSSLDYTIVRPG------------- 171

Query: 166 WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
              +    G+ + +     ++T+     D+A+   +++  +    + F +  
Sbjct: 172 PLSNEESTGK-VTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLN 222

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 69.7 bits (171), Expect = 7e-14
 Identities = 39/279 (13%), Positives = 84/279 (30%), Gaps = 55/279 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G +  IG  L   L ++  +  +       IA  +         +F      +  D  + 
Sbjct: 6   GSSGQIGTELVPYLAEKYGKKNV-------IASDIVQRDTGGI-KF------ITLDVSNR 51

Query: 62  DFVKSSLSAKGFDVVY------------------DINGREADEVEPILDAL--PNLEQFI 101
           D +  ++     D ++                   +N    +    IL+A     +E+ +
Sbjct: 52  DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVN---MNGTYNILEAAKQHRVEKVV 108

Query: 102 YCSSAGVYLKSDLLPHCETDTV-DPKSR-HKGKLNTESVLES----KGVNWTSLRPVYIY 155
             S+ GV+          + T+  P++     K+  E + +      G++  SLR   I 
Sbjct: 109 IPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGII 168

Query: 156 GP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS- 209
                            F+            +  +   + ++ D  +A V +   ++   
Sbjct: 169 SYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKL 228

Query: 210 --RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNP 246
             R  +N++     T   L     +     E E   Y  
Sbjct: 229 VLRNGYNVTAYT-FTPSELYSKIKERIPEFEIE---YKE 263

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 68.4 bits (167), Expect = 1e-13
 Identities = 48/249 (19%), Positives = 82/249 (32%), Gaps = 29/249 (11%)

Query: 6   FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
           +    LSR L  +G ++   +R           +  +      ++ L   G+    D V 
Sbjct: 15  YTARVLSRALAPQGWRIIGTSRNP---------DQMEAIRASGAEPLLWPGEEPSLDGVT 65

Query: 66  SSLSA----KGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
             L +     G D V    G +      I           Y S+  VY   D     ET 
Sbjct: 66  HLLISTAPDSGGDPVLAALGDQ------IAARAAQFRWVGYLSTTAVYGDHDGAWVDETT 119

Query: 122 TVDPKS-RHKGKLN-TESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 179
            + P + R + ++   +       +     R   IYGP    P       +L  G    I
Sbjct: 120 PLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGP-GRGPFS-----KLGKGGIRRI 173

Query: 180 PGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEP 239
                QV    HV+D+A+     +        V+N+  ++ V    +    A+  G P P
Sbjct: 174 IK-PGQVFSRIHVEDIAQVLAASMARPDPGA-VYNVCDDEPVPPQDVIAYAAELQGLPLP 231

Query: 240 ELVHYNPKE 248
             V ++  +
Sbjct: 232 PAVDFDKAD 240

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 68.4 bits (168), Expect = 2e-13
 Identities = 46/285 (16%), Positives = 87/285 (30%), Gaps = 55/285 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G   FIG  L   L+K    V     F+ G       L         E  S+   ++GD 
Sbjct: 32  GVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQY---NLDEVKTLVSTEQWSRFCFIEGDI 88

Query: 59  KDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPNL----------- 97
           +D    +  +  KG D V            I        +PI     N+           
Sbjct: 89  RDLTTCEQVM--KGVDHVLHQAALGSVPRSIV-------DPITTNATNITGFLNILHAAK 139

Query: 98  ----EQFIYCSSAGVYLKSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTS 148
               + F Y +S+  Y     LP  E +  +P S     ++  ++  +    + G     
Sbjct: 140 NAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIG 199

Query: 149 LRPVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
           LR   ++G        Y  V   +   +  G  + I G G       ++ ++ +  +   
Sbjct: 200 LRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSA 259

Query: 204 -GNEKASRQVFNISGEKYVT----FDGLARACAKAAGFPEPELVH 243
              + A   ++N++     T       +           +  + +
Sbjct: 260 LAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKY 304

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 66.6 bits (163), Expect = 3e-13
 Identities = 31/231 (13%), Positives = 75/231 (32%), Gaps = 50/231 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G  L + L    +Q+    R K     Q                  +K    D 
Sbjct: 7   GSTGRVGKSLLKSLSTTDYQIYAGAR-KVEQVPQYNN---------------VKAVHFDV 50

Query: 62  DFVKSSLSA--KGFDVVYDINGREADEVEPI-LDALPNL---------EQFIYCSSAGVY 109
           D+    ++    G D + +++G     +  + L     L         ++FI  S+    
Sbjct: 51  DWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS- 109

Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVL-ESKGVNWTSLRPVYIYGPLNYNPVEEWFF 168
           L+ +       D +     +  K   +  L +   +++T ++P  +              
Sbjct: 110 LQPEKWIGAGFDALKD--YYIAKHFADLYLTKETNLDYTIIQPGALTE------------ 155

Query: 169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGE 218
                     +     +V+    + D+A    +++  + +  +V ++ +G+
Sbjct: 156 -----EEATGLIDINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK 201

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 66.9 bits (163), Expect = 6e-13
 Identities = 39/237 (16%), Positives = 87/237 (36%), Gaps = 18/237 (7%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG F+ R  +   H   ++ R   P +     +  +EF      I  ++G+ +++
Sbjct: 11  GGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTI--IEGEMEEH 68

Query: 62  DFVKSSLSAKGFDVVYD-INGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDLLPH 117
           + + S L  K  D+V   +          I++A+    N+++F+         +   LP 
Sbjct: 69  EKMVSVL--KQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLP- 125

Query: 118 CETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI 177
                   +S  + K      +E+  + +T +             +             I
Sbjct: 126 ------PFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPH--PNRNDDI 177

Query: 178 PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKA 233
            I G+G     L + +D+A+  ++V  + +   ++      K  ++ + L       
Sbjct: 178 VIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAK 234

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 64.3 bits (156), Expect = 2e-12
 Identities = 28/233 (12%), Positives = 55/233 (23%), Gaps = 42/233 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  +     + GH+V    R     A    G +                 ++  
Sbjct: 7   GATGRAGSAIVAEARRRGHEVLAVVRDPQKAA-DRLGATVAT------------LVKEPL 53

Query: 62  DFVKSSLSAKGFDVVYDING---------READEVEPILDAL--PNLEQFIYCSSAGVYL 110
              ++ L     D V D               D    ++  L   +        SA + +
Sbjct: 54  VLTEADL--DSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAM 111

Query: 111 KSDLLPHCETDTVDPKSR------HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
                P          S+             + +  +  VNW  + P   +         
Sbjct: 112 PGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPS------G 165

Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
               +       +        +       ++A A +  L +  A R    +  
Sbjct: 166 PATSYVAGKDTLLVGEDGQSHI----TTGNMALAILDQLEHPTAIRDRIVVRD 214

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 65.3 bits (159), Expect = 2e-12
 Identities = 39/241 (16%), Positives = 87/241 (36%), Gaps = 34/241 (14%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR---GKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GGT +IG  + +  +K GH   +FTR    K  +  +            S   + +KG+ 
Sbjct: 18  GGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ----------SLGAIIVKGEL 67

Query: 59  KDYDFVKSSLSAKGFDVVYD-INGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDL 114
            +++ +   +  K  DVV   +   +  +   IL+A+    N+++F+         + + 
Sbjct: 68  DEHEKLVELM--KKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINA 125

Query: 115 LPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
           LP         ++  + K      +E   + +T +                +        
Sbjct: 126 LPPF-------EALIERKRMIRRAIEEANIPYTYVSANCFASYF-----INYLLRPYDPK 173

Query: 175 RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ--VFNISGEKYVTFDGLARACAK 232
             I + G+G     + + +D+    ++V  + +A  +  ++  S    +T   L     K
Sbjct: 174 DEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNI-ITQLELISRWEK 232

Query: 233 A 233
            
Sbjct: 233 K 233

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 63.3 bits (155), Expect = 9e-12
 Identities = 50/268 (18%), Positives = 84/268 (31%), Gaps = 43/268 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG   +G  L    + +GH++ +   F  GK    + LP  +     E         G  
Sbjct: 27  GGAGCLGSNLIEHWLPQGHEILVIDNFATGKR---EVLPPVAGLSVIE---------GSV 74

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-------LE--------QFIYC 103
            D   ++ +  +     V        D  +   DA  N        +        + +  
Sbjct: 75  TDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNF 134

Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGP---LN 159
            +A  Y +   +P        P + +   K   E+ L    V   SLR   + GP   + 
Sbjct: 135 QTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRLAIG 194

Query: 160 YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGE 218
             P    F+ RLKAG+          V     + D        L   + +  VFN+ +GE
Sbjct: 195 PIPT---FYKRLKAGQKCFC---SDTVRDFLDMSDFLAIADLSLQEGRPTG-VFNVSTGE 247

Query: 219 KYVTFDGLARACAKAAGFPEPELVHYNP 246
            +   + +        G    E V    
Sbjct: 248 GHSIKE-VFDVVLDYVGATLAEPVPVVA 274

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 63.3 bits (154), Expect = 1e-11
 Identities = 43/280 (15%), Positives = 82/280 (29%), Gaps = 45/280 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G  L R+    GH V       K  IA++L    +             +G   +
Sbjct: 12  GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLF---------QGPLLN 62

Query: 61  YDFVKSSLSA--KGFDVVYDI-NGREADEVE---PILDA---LPNLEQFIYCSSAGVYLK 111
                  +    +G  + +     +  DE+     + DA      ++ +IY S       
Sbjct: 63  ---NVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSS------- 112

Query: 112 SDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
              +P        P       K   E+ +   G+  T +            P   +    
Sbjct: 113 ---MPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMEL 169

Query: 171 LKAGR---PIPIPGSGIQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYVTFDG 225
           +  G      P       +  L    D+  A +Q+  +  +K +     ++ E  ++   
Sbjct: 170 MPDGTFEWHAPFDPDI-PLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE-TLSPVQ 227

Query: 226 LARACAKAAGFPEPELVHYNPKEFD-FGKKKAFPFRDQLR 264
           +  A ++A        V Y               +R+QL 
Sbjct: 228 VCAAFSRALNRR----VTYVQVPKVEIKVNIPVGYREQLE 263

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 62.7 bits (153), Expect = 2e-11
 Identities = 51/295 (17%), Positives = 87/295 (29%), Gaps = 74/295 (25%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
           GG  F+G  L + L++ G +QV     L +  K  +        D     F       + 
Sbjct: 39  GGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP-------DHPAVRF------SET 85

Query: 57  DRKDYDFVKSSLSAKGFDVVYDINGREADEV-------EPILDALPN-------LEQ--- 99
              D   + S      +D V+      A          +P+ D   N        E+   
Sbjct: 86  SITDDALLASLQ--DEYDYVF----HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKH 139

Query: 100 ------FIYCSSAGVYLKSDLLPHCETDTVDPKSRHK-------GKLNTESVL----ESK 142
                  +Y ++     +        T+  D  S H         K+  E       +  
Sbjct: 140 FKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH 199

Query: 143 GVNWTSLRPVYIYGPLNYNPVEEW--------------FFHRLKAGRPIPIPGSGIQVTQ 188
            +     R   +YGP        W              F ++   G P+P+   G+    
Sbjct: 200 QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRD 259

Query: 189 LGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVH 243
              V+D+A   +     +     V+NI+  K  +   LA    +  G    EL  
Sbjct: 260 FIFVEDVANGLIACA-ADGTPGGVYNIASGKETSIADLATKINEITG-NNTELDR 312

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 62.2 bits (152), Expect = 3e-11
 Identities = 65/284 (22%), Positives = 103/284 (36%), Gaps = 60/284 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  +   L+  G +V +      GK    + +P         F       + D 
Sbjct: 7   GGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENVPKG-----VPF------FRVDL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
           +D + V+ +        V       + + + E +P+LD   N       LE        +
Sbjct: 53  RDKEGVERAFREFRPTHVSHQAAQASVKVSVE-DPVLDFEVNLLGGLNLLEACRQYGVEK 111

Query: 100 FIYCSSAG-VY-LKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPV 152
            ++ S+ G +Y    +     ET    PKS +   K   E  L       G+ W SLR  
Sbjct: 112 LVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYG 171

Query: 153 YIYGPLNYNPVEE-----WFFHRLKAGRPIPI-----PGSGIQVTQLGHVKDLARAFVQV 202
            +YGP   +P  E      F  R+  G P+ +     PG    V    +V D+A A    
Sbjct: 172 NVYGP-RQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALA 230

Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNP 246
           L    +   ++N+   +  T   +  A A+AAG      V   P
Sbjct: 231 L---FSLEGIYNVGTGEGHTTREVLMAVAEAAGKAPE--VQPAP 269

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 61.9 bits (151), Expect = 3e-11
 Identities = 48/288 (16%), Positives = 97/288 (33%), Gaps = 56/288 (19%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTL---FTRGKAPIAQQLPGESD-QEFAEFSSKILHLK 55
           GG  F+G  L+    +     +V +   F         +       +    F  +++   
Sbjct: 17  GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVI--A 74

Query: 56  GDRKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE------------- 98
            D  +   ++  L    FD ++      +    +     L    N +             
Sbjct: 75  ADINNPLDLRR-LEKLHFDYLFHQAAVSDTTMLN---QELVMKTNYQAFLNLLEIARSKK 130

Query: 99  -QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG--KLNTESVL--ESKGVNWTSLRPVY 153
            + IY SSAGVY  +   P+       P++ + G  KL  +  +   S       LR  Y
Sbjct: 131 AKVIYASSAGVYGNTKA-PNVVGKNESPENVY-GFSKLCMDEFVLSHSNDNVQVGLR--Y 186

Query: 154 --IYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQ----VTQLGHVKDLARAFVQV 202
             +YGP          +         A + + +   G Q    V    +++D+ +A V+ 
Sbjct: 187 FNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFV----YIEDVIQANVKA 242

Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD 250
           +  +K+   V+N+   +  +++ +     +  G  +      NP  F 
Sbjct: 243 MKAQKS--GVYNVGYSQARSYNEIVSILKEHLGDFKVT-YIKNPYAFF 287

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 62.1 bits (151), Expect = 4e-11
 Identities = 56/328 (17%), Positives = 95/328 (28%), Gaps = 92/328 (28%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQL----PGESDQEFAEFSSKILH- 53
           GG  + G   +  L K+ ++V +     R        L    P  S  +       +   
Sbjct: 18  GGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGK 77

Query: 54  ----LKGDRKDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPN--- 96
                 GD  D++F+  S  +   D V          Y +  R       +     N   
Sbjct: 78  SIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRS----RAVYTQHNNVIG 133

Query: 97  ----LE---------QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL---- 139
               L            +   + G Y      P+ + +       H G+ +T        
Sbjct: 134 TLNVLFAIKEFGEECHLVKLGTMGEYGT----PNIDIEEGYITITHNGRTDTLPYPKQAS 189

Query: 140 ----ESK--------------GVNWTSLRPVYIYGP--------------LNYNPVEEW- 166
                SK              G+  T L    +YG               L+Y+ V    
Sbjct: 190 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 249

Query: 167 ---FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ--VFNISGEKYV 221
              F  +   G P+ + G G Q      ++D  +     + N   + +  VFN   E++ 
Sbjct: 250 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFS 309

Query: 222 TFDGLARACAKAA---GFPEPELVHYNP 246
             + LA    KA    G    ++   NP
Sbjct: 310 VNE-LASLVTKAGSKLGLDVKKMTVPNP 336

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 60.6 bits (147), Expect = 5e-11
 Identities = 33/270 (12%), Positives = 66/270 (24%), Gaps = 65/270 (24%)

Query: 2   GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  + + L +           R  A   +++ GE+D              GD  
Sbjct: 11  GASGRTGQIVYKKLKEGSDKFVAKGLVR-SAQGKEKIGGEADV-----------FIGDIT 58

Query: 60  DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALP------------------------ 95
           D D +  +   +G D +  +                                        
Sbjct: 59  DADSINPAF--QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQ 116

Query: 96  -------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTS 148
                   ++  +   S G       L       +        K   E  L   G  +T 
Sbjct: 117 IDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNI-----LVWKRKAEQYLADSGTPYTI 171

Query: 149 LRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
           +R   +                L  G+   +  +  +        D+A   +Q L  E+A
Sbjct: 172 IRAGGLLDKEGG-------VRELLVGKDDELLQTDTKTV---PRADVAEVCIQALLFEEA 221

Query: 209 SRQVFNISGEKYVT---FDGLARACAKAAG 235
             + F++  +   T           ++   
Sbjct: 222 KNKAFDLGSKPEGTSTPTKDFKALFSQVTS 251

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 61.2 bits (148), Expect = 6e-11
 Identities = 35/241 (14%), Positives = 77/241 (31%), Gaps = 26/241 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T FIG F++   +       +  R           +  +   +  + I  + G   + 
Sbjct: 17  GATGFIGQFVATASLDAHRPTYILARPGPRSPS--KAKIFKALEDKGAII--VYGLINEQ 72

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVE-PILDALPNLEQFIYCSSAGV---YLKSDLLPH 117
           + ++  L     D+V    G E+   +  ++ A           + G    +L S+    
Sbjct: 73  EAMEKILKEHEIDIVVSTVGGESILDQIALVKA---------MKAVGTIKRFLPSEF--G 121

Query: 118 CETDTVDPKSR----HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA 173
            + +  DP       ++ K     ++E  G+ +T +    I     YN +       L  
Sbjct: 122 HDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIH--PSEVLPP 179

Query: 174 GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAK 232
                I G G          D+ +  ++ + + +   +  +       +  + LA    K
Sbjct: 180 TDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEK 239

Query: 233 A 233
            
Sbjct: 240 K 240

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 60.9 bits (148), Expect = 8e-11
 Identities = 41/293 (13%), Positives = 73/293 (24%), Gaps = 67/293 (22%)

Query: 2   GGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL 54
           G    +G  L++ LVK+G        + TL    +        G       +        
Sbjct: 21  GAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGA-----VDA------R 69

Query: 55  KGDRKDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNLE------------- 98
             D       +  L     DV++    I   EA E++       NL+             
Sbjct: 70  AADLSAPGEAEK-LVEARPDVIFHLAAIVSGEA-ELDFDKGYRINLDGTRYLFDAIRIAN 127

Query: 99  -------QFIYCSSAGVYLKSDLLPHCETDTVDPKS---RHKGKLNTESVLES----KGV 144
                  + ++ SS  V+      P  +     P +     K     E +L         
Sbjct: 128 GKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQK--AICELLLSDYSRRGFF 185

Query: 145 NWTSLRPVYIYGPL--------NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
           +   +R   I             +             G+   +P            +   
Sbjct: 186 DGIGIRLPTICIRPGKPNAAASGFFSN---ILREPLVGQEAVLPVPESIRHWHASPRSAV 242

Query: 197 RAFVQVL---GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNP 246
              +        +   R+  ++ G    T      A  K AG     L+   P
Sbjct: 243 GFLIHGAMIDVEKVGPRRNLSMPGLSA-TVGEQIEALRKVAGEKAVALIRREP 294

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 60.3 bits (147), Expect = 1e-10
 Identities = 45/284 (15%), Positives = 78/284 (27%), Gaps = 57/284 (20%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  FIG  + + L  +G   + +      G                 + +      K D
Sbjct: 6   GGAGFIGSNIVKALNDKGITDILVVDNLKDG----------TKFVNLVDLNIADYMDKED 55

Query: 58  RKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------Q 99
                           + ++      +  E D  + ++D   N +               
Sbjct: 56  FLIQIMAGEEF--GDVEAIFHEGACSSTTEWDG-KYMMDN--NYQYSKELLHYCLEREIP 110

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPK-----SRHKGKLNTESVLESKGVNWTSLRPVYI 154
           F+Y SSA  Y           +   P      S+         +L          R   +
Sbjct: 111 FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNV 170

Query: 155 YGP-----LNYNPVEEWFFHRLKAG-RPIPIPGSGIQV---TQLGHVKDLARAFVQVLGN 205
           YGP      +   V      +L  G  P    GS           +V D+A   +  L  
Sbjct: 171 YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV---YVGDVADVNLWFL-- 225

Query: 206 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEF 249
           E     +FN+   +  +F  +A A        + E +   P + 
Sbjct: 226 ENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIP-FPDKL 268

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 57.9 bits (141), Expect = 6e-10
 Identities = 45/278 (16%), Positives = 82/278 (29%), Gaps = 71/278 (25%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  FIG  L+R LV  G +VT    L      P                      L+  
Sbjct: 14  GGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK---------------FLEKP 58

Query: 58  RKDYDFVKSSLSAKGFDVVY--------------------DING--------READEVEP 89
               +  +  L      +VY                    +++                 
Sbjct: 59  V--LELEERDL--SDVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSV----- 109

Query: 90  ILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES-----KG 143
                  + + +  S+  VY ++D LP  E   + P+S +   K+  E V  +       
Sbjct: 110 ------GVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVA 163

Query: 144 VNWTSLRPVYIYGP-LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
                +R   +YGP    + +       L     +P+ G G Q     ++ D+    V +
Sbjct: 164 PEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVAL 223

Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
               +    V N    + ++ + + R     +   E  
Sbjct: 224 A--NRPLPSVVNFGSGQSLSVNDVIRILQATSPAAEVA 259

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 57.7 bits (140), Expect = 9e-10
 Identities = 46/285 (16%), Positives = 79/285 (27%), Gaps = 59/285 (20%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  FIG  + + L  +G   + +      G                 + +      K D
Sbjct: 53  GGAGFIGSNIVKALNDKGITDILVVDNLKDG----------TKFVNLVDLNIADYMDKED 102

Query: 58  RKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------Q 99
                           + ++      +  E D  + ++D   N +               
Sbjct: 103 FLIQIMAGEEF--GDVEAIFHEGACSSTTEWDG-KYMMDN--NYQYSKELLHYCLEREIP 157

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPK-----SRHKGKLNTESVLESKGVNWTSLRPVYI 154
           F+Y SSA  Y           +   P      S+         +L          R   +
Sbjct: 158 FLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNV 217

Query: 155 YGP-----LNYNPVEEWFFHRLKAG-RPIPIPGSGIQ----VTQLGHVKDLARAFVQVLG 204
           YGP      +   V      +L  G  P    GS       V    +V D+A   +  L 
Sbjct: 218 YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV----YVGDVADVNLWFL- 272

Query: 205 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEF 249
            E     +FN+   +  +F  +A A        + E +   P + 
Sbjct: 273 -ENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIP-FPDKL 315

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 57.3 bits (139), Expect = 1e-09
 Identities = 33/253 (13%), Positives = 73/253 (28%), Gaps = 54/253 (21%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           G    IG  L++ L K  G +  +     +    +    P                   +
Sbjct: 9   GACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGP---------------FEVVN 53

Query: 58  RKDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNL---------------EQ 99
             D++ ++  +       +Y    +    A E  P      N+               ++
Sbjct: 54  ALDFNQIEHLVEVHKITDIYLMAALLSATA-EKNPAFAWDLNMNSLFHVLNLAKAKKIKK 112

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVD-PKSRHKG--KLNTESVLESK----GVNWTSLRPV 152
             + SS  V+  +    +    T+  P + + G  K   E   E      GV+  S+R  
Sbjct: 113 IFWPSSIAVFGPTTPKENTPQYTIMEPSTVY-GISKQAGERWCEYYHNIYGVDVRSIRYP 171

Query: 153 YIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL---G 204
            +                  F++  A +      S      + ++ D   A + ++    
Sbjct: 172 GLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPV 231

Query: 205 NEKASRQVFNISG 217
            +      +N++ 
Sbjct: 232 EKIKIHSSYNLAA 244

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 55.7 bits (135), Expect = 3e-09
 Identities = 40/187 (21%), Positives = 65/187 (34%), Gaps = 32/187 (17%)

Query: 60  DYDFVKSSLSA-KGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGV----YLKSDL 114
           DY+  +S   A  G   +  I+G   D    I+     ++       AGV    Y     
Sbjct: 53  DYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKA---ARDAGVKHIAYT-G-- 106

Query: 115 LPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLK 172
               E   +     H     TE  + +  + +T LR         Y    V E      +
Sbjct: 107 YAFAEESIIPLAHVHLA---TEYAIRTTNIPYTFLRNAL------YTDFFVNEGLRASTE 157

Query: 173 AGRPIPIPGSG----IQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLAR 228
           +G  +   GSG    +         +LA A   VL  E    + +N+   +  TFD LA+
Sbjct: 158 SGAIVTNAGSGIVNSV------TRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQ 211

Query: 229 ACAKAAG 235
             ++ +G
Sbjct: 212 ILSEVSG 218

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 55.0 bits (133), Expect = 5e-09
 Identities = 38/232 (16%), Positives = 75/232 (32%), Gaps = 39/232 (16%)

Query: 11  LSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA 70
            ++ +        +  R    +     G+      +             DY   +S + A
Sbjct: 17  TNQAIANHIDHFHIGVRNVEKVPDDWRGKV--SVRQL------------DYFNQESMVEA 62

Query: 71  -KGFDVVYDINGREADEVEPILDALPNLEQFIY-CSSAGV----YLKSDLLPHCETDTVD 124
            KG D V  I              +P +E  +Y    +GV    ++        + +   
Sbjct: 63  FKGMDTVVFIPSIIHPSF----KRIPEVENLVYAAKQSGVAHIIFI-G--YYADQHNNPF 115

Query: 125 PKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP-GSG 183
             S + G      +L + G+++T +R         Y    + +   L     +  P G G
Sbjct: 116 HMSPYFGY--ASRLLSTSGIDYTYVRMAM------YMDPLKPYLPELMNMHKLIYPAGDG 167

Query: 184 IQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG 235
                     D+AR  + ++ N     + + +SG  Y     LA   ++A+G
Sbjct: 168 --RINYITRNDIARGVIAIIKNPDTWGKRYLLSGYSY-DMKELAAILSEASG 216

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 54.1 bits (130), Expect = 7e-09
 Identities = 43/248 (17%), Positives = 82/248 (33%), Gaps = 40/248 (16%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  L + ++++G   +VTL  R K    ++     +QE  +F  K+       +
Sbjct: 25  GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFE-KLDDYASAFQ 83

Query: 60  DYDFV-------KSSLSAKGFDVV-YDINGREADEVEPILDALPNLEQFIYCSSAGVYLK 111
            +D         +    A+GF  V  D   + A+  +         + F   SS G    
Sbjct: 84  GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-----GCKHFNLLSSKGADKS 138

Query: 112 SDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL 171
           S+ L            + KG++    V E K   ++  RP  +      +   EW   + 
Sbjct: 139 SNFLY----------LQVKGEVE-AKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKF 187

Query: 172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA 231
                +P   +         V  + RA +  +   +           + +    +     
Sbjct: 188 --FGSLPDSWASGHSV---PVVTVVRAMLNNVVRPRD-------KQMELLENKAIHD-LG 234

Query: 232 KAAGFPEP 239
           KA G  +P
Sbjct: 235 KAHGSLKP 242

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 54.3 bits (131), Expect = 9e-09
 Identities = 54/285 (18%), Positives = 94/285 (32%), Gaps = 59/285 (20%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTLFTR-GKAPIAQQL--PGESDQEFAEFSSKILHLKGD 57
           GGT   G  ++R L+++G  +V + TR  +   A++L   G      AE       ++GD
Sbjct: 12  GGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQG------AEV------VQGD 59

Query: 58  RKDYDFVKSSLSAKGFDVVYDI-----NGREADEVE---PILDA--LPNLEQFIYCSSAG 107
           + D   ++ +L   G    + +     +  +  EV+    + D      L   +Y     
Sbjct: 60  QDDQVIMELAL--NGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLEN 117

Query: 108 VYLKSD---LLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
           +   +       H +           GK   E      GV  TS+R    +     N + 
Sbjct: 118 IKKLTAGRLAAAHFD-----------GKGEVEEYFRDIGVPMTSVRLPCYF----ENLLS 162

Query: 165 EWFFHRLKAGR----PIPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEK 219
            +   +   G+     +P     +       V DL    + +L   EK   Q   +S   
Sbjct: 163 HFLPQKAPDGKSYLLSLPTGDVPM---DGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTC- 218

Query: 220 YVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLR 264
             T +  A    K         VH      +  +K  FP    L 
Sbjct: 219 RHTAEEYAALLTKHTRKV----VHDAKMTPEDYEKLGFPGARDLA 259

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 54.7 bits (132), Expect = 9e-09
 Identities = 49/284 (17%), Positives = 90/284 (31%), Gaps = 56/284 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G   FI   ++R L  EGH V     +    + + +      EF            D + 
Sbjct: 36  GAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMF---CDEF---------HLVDLRV 83

Query: 61  YDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNL---------------EQFI 101
            +        +G D V+    D+ G    +    +    N                ++F 
Sbjct: 84  MENCLKVT--EGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFF 141

Query: 102 YCSSAGVYLKSDLLPHCETDT-------VDPKSRH-KGKLNTESVL----ESKGVNWTSL 149
           Y SSA +Y +   L               +P+      KL TE +     +  G+     
Sbjct: 142 YASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIG 201

Query: 150 RPVYIYGP-LNYNPVEEW----FFHR-LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
           R   IYGP   +    E     F  +   +     + G G+Q      + +     +++ 
Sbjct: 202 RFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT 261

Query: 204 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPK 247
             +   R+  NI  ++ V+ + +A           P  +H+ P 
Sbjct: 262 --KSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLP--IHHIPG 301

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 51.6 bits (124), Expect = 5e-08
 Identities = 41/230 (17%), Positives = 63/230 (27%), Gaps = 56/230 (24%)

Query: 2   GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G T   G  L   ++ E    +V    R       +L                       
Sbjct: 12  GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQL-------DG 64

Query: 60  DYDFV--------KSSLSAKGFDVV-YDINGREADEVEPILDALPNLEQFIYCSSAGVYL 110
             D          K + S + F  V +D+                    ++  S+ G   
Sbjct: 65  SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGK-----RALEMGARHYLVVSALGA-- 117

Query: 111 KSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEE 165
                        D KS     R KG+L  +++ E      T  RP  ++GP       E
Sbjct: 118 -------------DAKSSIFYNRVKGELE-QALQEQGWPQLTIARPSLLFGP------RE 157

Query: 166 WFFHRLKAGRPI--PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
            F        PI   +PG    +       DLARA  ++   E    +  
Sbjct: 158 EFRLAEILAAPIARILPGKYHGI----EACDLARALWRLALEEGKGVRFV 203

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 51.5 bits (124), Expect = 7e-08
 Identities = 39/186 (20%), Positives = 65/186 (34%), Gaps = 33/186 (17%)

Query: 60  DYDFVKSSLSA-KGFDVVYDIN----GREADEVEPILDALPNLEQFIYCSSAGV----YL 110
           DY    +  SA +G + +  I+    G+ A +   +++A           +AGV    Y 
Sbjct: 52  DYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINA---------AKAAGVKFIAYT 102

Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
            S  L H +T  +     H     TE +L   G+ +T LR  +      Y+         
Sbjct: 103 -S--LLHADTSPLGLADEHIE---TEKMLADSGIVYTLLRNGW------YSENYLASAPA 150

Query: 171 LKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA 229
                      G G          D A A  +V+       +V+ ++G+   T   LA  
Sbjct: 151 ALEHGVFIGAAGDG--KIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAE 208

Query: 230 CAKAAG 235
             K +G
Sbjct: 209 LTKQSG 214

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 49.2 bits (117), Expect = 6e-07
 Identities = 43/264 (16%), Positives = 72/264 (27%), Gaps = 53/264 (20%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSK---ILHLKGD 57
           G   F+G  L   L     H +    R             ++E      K   I+HL G 
Sbjct: 7   GAKGFVGKNLKADLTSTTDHHIFEVHRQ----------TKEEELESALLKADFIVHLAGV 56

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDAL--PNLEQFIYCSSAGVYLKSDLL 115
                        +        N      ++ +LD L     +  I  SS+         
Sbjct: 57  N----------RPEHDKEFSLGN---VSYLDHVLDILTRNTKKPAILLSSSIQA------ 97

Query: 116 PHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGP---LNYNPVEEWF 167
                      + + + KL  E +L    E  G      R   ++G     NYN V   F
Sbjct: 98  --------TQDNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATF 149

Query: 168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL-GNEKASRQVFNISGEKYVTFDGL 226
            +++     I +         L +V D+     + + G       V  +     VT   +
Sbjct: 150 CYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEI 208

Query: 227 ARACAKAAGFPEPELVHYNPKEFD 250
                K         +      F+
Sbjct: 209 VDLLYKFKQSRLDRTLPKLDNLFE 232

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 30/212 (14%), Positives = 51/212 (24%), Gaps = 46/212 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  +   L    H+V L           +   + +   E       +  D  D 
Sbjct: 9   GAAGGVGSAIRPHLGTLAHEVRLSDI--------VDLGAAEAHEEI------VACDLADA 54

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVE-PILDALPN--------LE--------QFIYCS 104
             V   +  K  D +  +       VE P  D L           E        + ++ S
Sbjct: 55  QAVHDLV--KDCDGIIHL---GGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFAS 109

Query: 105 SAGVY-LKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGP- 157
           S                    P S +   K   E +         +   ++R    +   
Sbjct: 110 SNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKP 169

Query: 158 LNYNPVEEW---FFHRLKAGRPIPIPGSGIQV 186
            +   +  W           R    P  G  V
Sbjct: 170 KDARMMATWLSVDDFMRLMKRAFVAPKLGCTV 201

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 42.6 bits (101), Expect = 8e-05
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 10/74 (13%)

Query: 154 IYGPLNYNPVEE----WFFHR-----LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204
           +YG   +   ++    WF  +         +P  I G+G QV  + H +D+   +   L 
Sbjct: 195 MYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALA 254

Query: 205 NEKASR-QVFNISG 217
           N    R   FNI G
Sbjct: 255 NVSKIRGNAFNIGG 268

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 42.0 bits (99), Expect = 9e-05
 Identities = 29/239 (12%), Positives = 54/239 (22%), Gaps = 62/239 (25%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  +   L      + L            P +      E       ++ D  D 
Sbjct: 10  GAAGQLGRVMRERLAPMAEILRLADLS--------PLDPAGPNEEC------VQCDLADA 55

Query: 62  DFVKSSLSAKGFDVVY-----DINGREADEVEP-------ILDA--LPNLEQFIYCSSAG 107
           + V + +   G D +       +       ++        + +A       + ++ SS  
Sbjct: 56  NAVNAMV--AGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNH 113

Query: 108 VY-LKSDLLPHCETDTVDPKSRHKG--KLNTESVL----ESKGVNWTSLRPVYIYG-PLN 159
                             P   + G  K   E++     +  G     +R       P N
Sbjct: 114 TIGYYPQTERLGPDVPARPDGLY-GVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNN 172

Query: 160 YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
           Y  +  WF H                        D       V         V   +  
Sbjct: 173 YRMLSTWFSHD-----------------------DFVSLIEAVFRAPVLGCPVVWGASA 208

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	287
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.97
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.97
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.97
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.97
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.97
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.97
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.97
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.96
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.96
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.96
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.96
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.96
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.96
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.96
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.95
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.95
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.95
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.95
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.95
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.95
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.95
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.95
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.94
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.94
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.91
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.9
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.84
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.84
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.83
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.82
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.81
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.79
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.78
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.78
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.77
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.77
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.77
1spx_A	278	Short-chain reductase family member (5L265); paral	99.77
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.77
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.76
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.76
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.76
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.76
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.76
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.75
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.75
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.75
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.75
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.75
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.75
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.75
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.75
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.74
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.74
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.74
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.74
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.73
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.73
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.73
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.73
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.73
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.73
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.73
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.72
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.72
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.72
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.72
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.72
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.72
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.72
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.72
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.72
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.72
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.72
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.72
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.72
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.72
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.72
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.71
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.71
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.71
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.71
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.71
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.71
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.71
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.71
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.71
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.71
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.71
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.7
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.7
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.7
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.7
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.7
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.7
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.7
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.7
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.7
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.69
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.69
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.69
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.69
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.69
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.69
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.69
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.69
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.69
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.69
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.69
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.69
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.69
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.69
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.69
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.69
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.69
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.68
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.68
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.68
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.68
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.68
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.68
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.68
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.68
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.68
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.68
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.68
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.68
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.68
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.68
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.68
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.68
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.67
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.67
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.67
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.67
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.67
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.67
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.67
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.67
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.67
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.66
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.66
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.66
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.66
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.66
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.66
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.66
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.66
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.66
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.66
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.66
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.66
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.66
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.66
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.66
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.66
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.66
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.66
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.65
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.65
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.65
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.65
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.64
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.64
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.64
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.64
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.64
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.64
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.64
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.63
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.63
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.62
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.62
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.62
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.62
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.62
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.62
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.61
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.61
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.61
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.61
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.61
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.61
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.61
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.61
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.61
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.61
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.61
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.6
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.6
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.6
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.6
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.6
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.59
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.59
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.58
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.58
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.58
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.58
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.58
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.58
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.57
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.57
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.57
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.56
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.55
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.55
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.55
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.55
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.54
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.53
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.53
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.52
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.51
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.51
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.5
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.5
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.5
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.49
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.48
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.48
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.48
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.47
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.46
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.46
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.46
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.45
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.45
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.4
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.4
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.38
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.36
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.34
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.29
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.25
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.23
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.23
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.08
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	98.99
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	98.96
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.86
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.85
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.64
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.57
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.52
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	98.5
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.49
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	98.48
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.44
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	98.42
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.42
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.25
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.17
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.09
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.05
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.05
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.0
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.9
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.88
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.84
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.79
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.79
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.68
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.65
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.64
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	97.57
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.56
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.51
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.48
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.45
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.32
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.27
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.27
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.16
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.1
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	96.96
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.88
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	96.85
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.8
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	96.77
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	96.74
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	96.71
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.66
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	96.66
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	96.63
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.59
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.56
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.56
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	96.49
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.49
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	96.49
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.47
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.44
3gms_A	340	Putative NADPH:quinone reductase; structural genom	96.41
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	96.37
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.3
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	96.27
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	96.26
1lnq_A	336	MTHK channels, potassium channel related protein;	96.21
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.16
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.14
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.05
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	95.81
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	95.78
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	95.78
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	95.75
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	95.74
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	95.71
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	95.71
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.64
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	95.64
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.6
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.55
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	95.47
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	95.46
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	95.41
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	95.31
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	95.29
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	95.28
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	95.19
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	95.18
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	95.11
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	95.0
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	94.98
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	94.97
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	94.95
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	94.92
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	94.91
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	94.87
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	94.86
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	94.84
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	94.81
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	94.78
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	94.7
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	94.64
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	94.59
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	94.58
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	94.57
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	94.54
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	94.53
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	94.49
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.47
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	94.4
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	94.35
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	94.34
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	94.31
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	94.31
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	94.23
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	94.2
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	94.2
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	94.2
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	94.11
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	94.07
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	94.01
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	94.01
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	93.99
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	93.98
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	93.97
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	93.96
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	93.91
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	93.91
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	93.9
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	93.9
3ojo_A	431	CAP5O; rossmann fold, complex with cofactor NAD an	93.85
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	93.83
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	93.83
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	93.82
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	93.82
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	93.81
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	93.8
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	93.79
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	93.78
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	93.75
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	93.72
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	93.7
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	93.67
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	93.67
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	93.65
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	93.64
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	93.63
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	93.63
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	93.6
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	93.6
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	93.56
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	93.53
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	93.53
4ezb_A	317	Uncharacterized conserved protein; structural geno	93.52
3qha_A	296	Putative oxidoreductase; seattle structural genomi	93.52
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	93.52
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	93.48
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	93.43
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	93.42
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	93.39
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	93.38
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	93.35
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	93.33
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	93.29
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	93.27
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	93.25
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	93.25
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	93.2
2duw_A	145	Putative COA-binding protein; ligand binding prote	93.2
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	93.16
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	93.14
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	93.12
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	93.12
1vm6_A	228	DHPR, dihydrodipicolinate reductase; TM1520, struc	93.09
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	93.09
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	93.05
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	93.05
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	93.02
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	93.01
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	92.98
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	92.88
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	92.8
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	92.8
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	92.77
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	92.74
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	92.73
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	92.72
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	92.69
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	92.62
1xdw_A	331	NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas	92.59
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	92.57
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	92.49
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	92.46
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	92.39
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	92.3
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	92.24
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	92.23
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	92.21
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	92.21
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	92.14
1sc6_A	404	PGDH, D-3-phosphoglycerate dehydrogenase; alloster	92.11
3oet_A	381	Erythronate-4-phosphate dehydrogenase; structural	92.11
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	92.05

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=1.4e-41  Score=284.59  Aligned_cols=257  Identities=21%  Similarity=0.253  Sum_probs=219.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|++.. .. +            .+++++.+|+. .+++.++++  ++|+|||+|
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~-~------------~~~~~~~~Dl~-~~~~~~~~~--~~d~Vih~a   70 (311)
T 3m2p_A            8 TGGTGFLGQYVVESIKNDGNTPIILTRSIGN-KA-I------------NDYEYRVSDYT-LEDLINQLN--DVDAVVHLA   70 (311)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------CCEEEECCCC-HHHHHHHTT--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-cc-C------------CceEEEEcccc-HHHHHHhhc--CCCEEEEcc
Confidence            7999999999999999999999999999333 21 2            37899999999 999999999  999999999


Q ss_pred             CCC------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhh----
Q 023110           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----  141 (287)
Q Consensus        81 ~~~------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~----  141 (287)
                      +..            +.++.+++++++  ++++|||+||..+|+.....+++|+++..|.+.| .+|..+|.+++.    
T Consensus        71 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~  150 (311)
T 3m2p_A           71 ATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRK  150 (311)
T ss_dssp             CCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            863            445788999987  8889999999999998877789999999888877 999999998854    


Q ss_pred             CCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcc
Q 023110          142 KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (287)
Q Consensus       142 ~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~  220 (287)
                      .+++++++||+.+|||+... .+...++..+..++++.+++++++.++++|++|+|++++.+++++. .+++||+++++.
T Consensus       151 ~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~~i~~~~~  229 (311)
T 3m2p_A          151 KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSGTFNIGSGDA  229 (311)
T ss_dssp             SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCEEEEECCSCE
T ss_pred             cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCCeEEeCCCCc
Confidence            79999999999999997543 5777888888899988888889999999999999999999998876 688999999999


Q ss_pred             cCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          221 VTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       221 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +|+.|+++.+++.+|.+. .+...+..         .........+|+ +|++++|||+|++++++
T Consensus       230 ~s~~e~~~~i~~~~g~~~-~~~~~~~~---------~~~~~~~~~~d~-~k~~~~lG~~p~~~~~~  284 (311)
T 3m2p_A          230 LTNYEVANTINNAFGNKD-NLLVKNPN---------ANEGIHSSYMDS-SKAKELLDFSTDYNFAT  284 (311)
T ss_dssp             ECHHHHHHHHHHHTTCTT-CEEECSSS---------BCCSCCCBCBCC-HHHHHHSCCCCSCCHHH
T ss_pred             ccHHHHHHHHHHHhCCCC-cceecCCC---------CCCCcCceecCH-HHHHHHhCCCcccCHHH
Confidence            999999999999999876 44444331         112235667889 99999999999998875

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=1.5e-41  Score=289.02  Aligned_cols=277  Identities=17%  Similarity=0.171  Sum_probs=220.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|+.......+.............+++++.+|+.|.+++.++++  ++|+|||+|
T Consensus        31 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~A  108 (351)
T 3ruf_A           31 TGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--GVDHVLHQA  108 (351)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--CCCEEEECC
Confidence            799999999999999999999999999876422111100000000001689999999999999999999  999999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhh-
Q 023110           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-  140 (287)
                      +..                +.++.++++++.  ++++|||+||..+|+.....+++|+++..|.+.| .+|..+|.+++ 
T Consensus       109 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  188 (351)
T 3ruf_A          109 ALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQV  188 (351)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHH
Confidence            862                445788999987  7889999999999998888899999999888877 99999998875 


Q ss_pred             ---hCCCcEEEEecCeeecCCCCC-----ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcC-CccCCc
Q 023110          141 ---SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQ  211 (287)
Q Consensus       141 ---~~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~-~~~~~~  211 (287)
                         +.+++++++||+++|||+...     .++..++..+..++++.+++++++.++++|++|+|++++.++.+ +...++
T Consensus       189 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~  268 (351)
T 3ruf_A          189 YARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDN  268 (351)
T ss_dssp             HHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSE
T ss_pred             HHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccccCCC
Confidence               458999999999999997532     46677888888998888888899999999999999999999987 345788


Q ss_pred             eEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          212 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       212 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +||+++++.+|+.|+++.+++.+|.+. .+...+......     .........+|+ +|++++|||+|++++++
T Consensus       269 ~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~-----~~~~~~~~~~d~-~k~~~~lG~~p~~~~~~  336 (351)
T 3ruf_A          269 IYNVAVGDRTTLNELSGYIYDELNLIH-HIDKLSIKYREF-----RSGDVRHSQADV-TKAIDLLKYRPNIKIRE  336 (351)
T ss_dssp             EEEESCSCCEEHHHHHHHHHHHHHTTC-CC-----EEECC-----CTTCCSBCCBCC-HHHHHHHCCCCCCCHHH
T ss_pred             EEEeCCCCcccHHHHHHHHHHHhCccc-ccccccccccCC-----CCCccceeeeCH-HHHHHHhCCCCCCCHHH
Confidence            999999999999999999999999843 211111111100     111234566889 99999999999998875

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=5.5e-41  Score=284.97  Aligned_cols=268  Identities=15%  Similarity=0.204  Sum_probs=219.6

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      ||||||||++|+++|+++|  ++|++++|..... ...+....      ...+++++.+|+.|.+.+.++++..++|+||
T Consensus        30 tGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi  103 (346)
T 4egb_A           30 TGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQ------DHPNYYFVKGEIQNGELLEHVIKERDVQVIV  103 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTT------TCTTEEEEECCTTCHHHHHHHHHHHTCCEEE
T ss_pred             ECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhc------cCCCeEEEEcCCCCHHHHHHHHhhcCCCEEE
Confidence            7999999999999999999  7888888765321 12221110      0258999999999999999999844599999


Q ss_pred             ecCCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccC-CCCCCCCCCCCCCCcch-hhhHHHHH
Q 023110           78 DINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        78 ~~a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (287)
                      |+|+..                +.++.++++++.  ++++|||+||..+|+.. ...+++|+++..|.+.| .+|..+|.
T Consensus       104 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  183 (346)
T 4egb_A          104 NFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADM  183 (346)
T ss_dssp             ECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHH
Confidence            999863                335788999987  78899999999999976 45689999999888877 99999999


Q ss_pred             Hhhh----CCCcEEEEecCeeecCCCC-CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCce
Q 023110          138 VLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV  212 (287)
Q Consensus       138 ~~~~----~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~  212 (287)
                      +++.    .+++++++||+.+|||+.. ..+...++..+..++++.+++++.+.++++|++|+|++++.+++++. .+++
T Consensus       184 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~  262 (346)
T 4egb_A          184 IALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-VGEV  262 (346)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred             HHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC-CCCE
Confidence            8854    6899999999999999754 35677788888999888888889999999999999999999998876 6789


Q ss_pred             EEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          213 FNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       213 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      ||+++++.+|+.|+++.+.+.+|.+.+.+...+..          +.......+|+ +|++++|||+|++++++
T Consensus       263 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----------~~~~~~~~~d~-~k~~~~lG~~p~~~~~e  325 (346)
T 4egb_A          263 YNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDR----------LGHDRRYAINA-EKMKNEFDWEPKYTFEQ  325 (346)
T ss_dssp             EEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC------------CCCSCCCBCC-HHHHHHHCCCCCCCHHH
T ss_pred             EEECCCCceeHHHHHHHHHHHhCCCcccccccCCC----------CCCcceeeccH-HHHHHHcCCCCCCCHHH
Confidence            99999999999999999999999876433332221          11234556888 99999999999999876

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=6.1e-41  Score=280.71  Aligned_cols=265  Identities=20%  Similarity=0.235  Sum_probs=213.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|+........           ..+++++.+|+.|.+ +.++++  + |+|||+|
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~-~~~~~~--~-d~vih~A   70 (312)
T 3ko8_A            6 TGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----------NPSAELHVRDLKDYS-WGAGIK--G-DVVFHFA   70 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-----------CTTSEEECCCTTSTT-TTTTCC--C-SEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-----------CCCceEEECccccHH-HHhhcC--C-CEEEECC
Confidence            799999999999999999999999999876533222           257899999999998 888887  5 9999999


Q ss_pred             CC----------------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhh-
Q 023110           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (287)
Q Consensus        81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-  140 (287)
                      +.                |+.++.+++++++  ++++|||+||..+|+.....+++|+.+..|.+.| .+|..+|.+++ 
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~  150 (312)
T 3ko8_A           71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCAT  150 (312)
T ss_dssp             SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            85                2345778999887  8889999999999998887889999998888877 99999998875 


Q ss_pred             ---hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcC-CCccCCCCCCceeeeeeHHHHHHHHHHHHcC---CccCCceE
Q 023110          141 ---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGN---EKASRQVF  213 (287)
Q Consensus       141 ---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~---~~~~~~~~  213 (287)
                         +.+++++++||+++|||+....+...++..+..+ ..+.+++++++.++++|++|+|++++.++++   ....+++|
T Consensus       151 ~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~  230 (312)
T 3ko8_A          151 YARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLAL  230 (312)
T ss_dssp             HHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred             HHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEE
Confidence               3589999999999999987666677777777666 4566778889999999999999999999987   44467899


Q ss_pred             EecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          214 NISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       214 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      |+++++.+|+.|+++.+.+.+|.+. .+...+......    ..+.......+|+ +|++++|||+|++++++
T Consensus       231 ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~----~~~~~~~~~~~d~-~k~~~~lG~~p~~~~~~  297 (312)
T 3ko8_A          231 NVGNVDAVRVLDIAQIVAEVLGLRP-EIRLVPSTPDGR----GWPGDVKYMTLAV-TKLMKLTGWRPTMTSAE  297 (312)
T ss_dssp             EESCSSCEEHHHHHHHHHHHHTCCC-EEEEC--------------CCCSEECBCC-HHHHHHHCCCCSSCHHH
T ss_pred             EEcCCCceeHHHHHHHHHHHhCCCC-ceeecCcccccc----CCCCCccccccCH-HHHHHHhCCCCCCCHHH
Confidence            9999999999999999999999875 555544322110    1122234567889 99999999999999876

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=1.3e-40  Score=282.77  Aligned_cols=252  Identities=19%  Similarity=0.247  Sum_probs=216.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+...                 .+++++.+|+.|.+.+.++++  ++|+|||+|
T Consensus        25 tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A   85 (347)
T 4id9_A           25 TGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------TGGEEVVGSLEDGQALSDAIM--GVSAVLHLG   85 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------SCCSEEESCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------CCccEEecCcCCHHHHHHHHh--CCCEEEECC
Confidence            7999999999999999999999999998754                 367889999999999999999  999999999


Q ss_pred             CCC--------------cccHHHHHHhCC--CCccEEEEecceeecc--CCCCCCCCCCCCCCCcch-hhhHHHHHHhh-
Q 023110           81 GRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLK--SDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (287)
Q Consensus        81 ~~~--------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~--~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-  140 (287)
                      +..              +.++.++++++.  ++++|||+||..+|+.  ....+++|+++..|.+.| .+|..+|.+++ 
T Consensus        86 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  165 (347)
T 4id9_A           86 AFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRF  165 (347)
T ss_dssp             CCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            863              345788999987  7889999999999998  566789999998888877 99999999874 


Q ss_pred             ---hCCCcEEEEecCeee-------------cCCCC------------CChhHHHHHHHHcCCCccCCCCCCceeee---
Q 023110          141 ---SKGVNWTSLRPVYIY-------------GPLNY------------NPVEEWFFHRLKAGRPIPIPGSGIQVTQL---  189 (287)
Q Consensus       141 ---~~~~~~~ilR~~~v~-------------g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  189 (287)
                         +.+++++++||+.+|             ||+..            ..++..++..+..+.++.+++++++.+++   
T Consensus       166 ~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  245 (347)
T 4id9_A          166 HQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMH  245 (347)
T ss_dssp             HHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEEC
T ss_pred             HHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccC
Confidence               568999999999999             87522            34566677788888887777888888899   


Q ss_pred             -eeHHHHHHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccc
Q 023110          190 -GHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSM  268 (287)
Q Consensus       190 -i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (287)
                       +|++|+|++++.+++++...+++||+++++.+|+.|+++.+++.+|.+. .+...+...             ....+|+
T Consensus       246 ~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~~-------------~~~~~d~  311 (347)
T 4id9_A          246 ITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPI-VTVDFPGDG-------------VYYHTSN  311 (347)
T ss_dssp             EEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCE-EEEECSSCC-------------CBCCBCC
T ss_pred             cEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCC-ceeeCCCcc-------------cccccCH
Confidence             9999999999999998855788999999999999999999999999865 444433221             2556888


Q ss_pred             hhhhhhcCCCcccccccc
Q 023110          269 CSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       269 ~~k~~~~lg~~p~~~~~~  286 (287)
                       +|++++|||+|++++++
T Consensus       312 -~k~~~~lG~~p~~~~~~  328 (347)
T 4id9_A          312 -ERIRNTLGFEAEWTMDR  328 (347)
T ss_dssp             -HHHHHHHCCCCCCCHHH
T ss_pred             -HHHHHHhCCCCCCCHHH
Confidence             99999999999999876

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.8e-40  Score=284.45  Aligned_cols=271  Identities=18%  Similarity=0.223  Sum_probs=215.2

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCC-ChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~-d~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|+++|+++ |++|++++|+.........          ..+++++.+|+. |.+.+.++++  ++|+|||
T Consensus        30 tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~~~~Dl~~d~~~~~~~~~--~~d~Vih   97 (372)
T 3slg_A           30 LGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK----------HERMHFFEGDITINKEWVEYHVK--KCDVILP   97 (372)
T ss_dssp             ESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG----------STTEEEEECCTTTCHHHHHHHHH--HCSEEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc----------CCCeEEEeCccCCCHHHHHHHhc--cCCEEEE
Confidence            799999999999999998 9999999998765322221          368999999999 9999999999  8999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCC-------CCCcch-hhh
Q 023110           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGK  132 (287)
Q Consensus        79 ~a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~~~~~~-~~k  132 (287)
                      +|+..                +.++.+++++++  + ++|||+||..+|+.....+++|++.+       .|.+.| .+|
T Consensus        98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK  176 (372)
T 3slg_A           98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSK  176 (372)
T ss_dssp             CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred             cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHH
Confidence            99863                345688999987  7 99999999999998777788888755       455566 999


Q ss_pred             HHHHHHhhhC---CCcEEEEecCeeecCCCC---------CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          133 LNTESVLESK---GVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       133 ~~~E~~~~~~---~~~~~ilR~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      ..+|.+++..   +++++++||+++|||+..         ..++..++..+..++++.+++++++.++++|++|+|++++
T Consensus       177 ~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  256 (372)
T 3slg_A          177 QLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALM  256 (372)
T ss_dssp             HHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHH
Confidence            9999998655   899999999999999743         2366778888889988888888899999999999999999


Q ss_pred             HHHcCCc--cCCceEEecCC-cccCHHHHHHHHHHHhCCCCCeEEeCCcc-c-cccCC---Ccccccccccccccchhhh
Q 023110          201 QVLGNEK--ASRQVFNISGE-KYVTFDGLARACAKAAGFPEPELVHYNPK-E-FDFGK---KKAFPFRDQLRRQSMCSDG  272 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-~-~~~~~---~~~~~~~~~~~~~~~~~k~  272 (287)
                      .+++++.  ..+++||++++ +.+|+.|+++.+++.+|.+. .+...+.. . .....   ............+|+ +|+
T Consensus       257 ~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~k~  334 (372)
T 3slg_A          257 KIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFP-EYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKI-ENT  334 (372)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCT-TTHHHHHTCCEEEC-------------CCCCBCC-HHH
T ss_pred             HHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCc-ccccccccceeeeccccccccCCccccceeecCH-HHH
Confidence            9998875  46889999994 89999999999999998754 21111100 0 00000   000011234566788 999


Q ss_pred             hhcCCCcccccccc
Q 023110          273 NLSLTWWKVLQTHT  286 (287)
Q Consensus       273 ~~~lg~~p~~~~~~  286 (287)
                      +++|||+|++++++
T Consensus       335 ~~~lG~~p~~~l~e  348 (372)
T 3slg_A          335 MQELGWAPQFTFDD  348 (372)
T ss_dssp             HHHHTCCCCCCHHH
T ss_pred             HHHcCCCCCCCHHH
Confidence            99999999999876

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=1.7e-39  Score=277.36  Aligned_cols=267  Identities=16%  Similarity=0.184  Sum_probs=213.9

Q ss_pred             CCcccchHHHHHHHHHH--cCCeEEEEEcCCcccc---ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCcc
Q 023110            1 MGGTRFIGVFLSRLLVK--EGHQVTLFTRGKAPIA---QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~--~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d   74 (287)
                      ||||||||++|+++|++  .|++|++++|+.....   ....... ........+++++.+|+.|++++..+ ..  ++|
T Consensus        16 TGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~D   92 (362)
T 3sxp_A           16 TGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLG-HFKNLIGFKGEVIAADINNPLDLRRLEKL--HFD   92 (362)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCC-CGGGGTTCCSEEEECCTTCHHHHHHHTTS--CCS
T ss_pred             ECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhh-hhhhccccCceEEECCCCCHHHHHHhhcc--CCC
Confidence            79999999999999999  8999999999765210   0000000 00011134679999999999999998 55  999


Q ss_pred             EEEecCCCC--------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHH
Q 023110           75 VVYDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        75 ~vi~~a~~~--------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (287)
                      +|||+|+..              +.++.+++++++  +++ |||+||..+||.... +++|+++..|.+.| .+|..+|.
T Consensus        93 ~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~E~  170 (362)
T 3sxp_A           93 YLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPENVYGFSKLCMDE  170 (362)
T ss_dssp             EEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCSSHHHHHHHHHHH
T ss_pred             EEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCCChhHHHHHHHHH
Confidence            999999863              356788999987  555 999999999998766 89999999998877 99999999


Q ss_pred             HhhhCC--CcEEEEecCeeecCCCCC-----ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCC
Q 023110          138 VLESKG--VNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (287)
Q Consensus       138 ~~~~~~--~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (287)
                      +++...  ++++++||+++|||+...     .+...++..+..+.++.+++++++.++++|++|+|++++.+++++. .|
T Consensus       171 ~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~-~g  249 (362)
T 3sxp_A          171 FVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK-SG  249 (362)
T ss_dssp             HHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS-CE
T ss_pred             HHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC-CC
Confidence            987654  889999999999998532     5677788888888888888888899999999999999999998775 45


Q ss_pred             ceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       211 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                       +||+++++.+|+.|+++.+.+.+| +. .+...+...         ........+|+ +|++++|||+|++++++
T Consensus       250 -~~~i~~~~~~s~~e~~~~i~~~~g-~~-~~~~~~~~~---------~~~~~~~~~d~-~k~~~~lG~~p~~~l~e  312 (362)
T 3sxp_A          250 -VYNVGYSQARSYNEIVSILKEHLG-DF-KVTYIKNPY---------AFFQKHTQAHI-EPTILDLDYTPLYDLES  312 (362)
T ss_dssp             -EEEESCSCEEEHHHHHHHHHHHHC-CC-EEECCC----------------CCCCBCC-HHHHHHHCCCCCCCHHH
T ss_pred             -EEEeCCCCCccHHHHHHHHHHHcC-CC-ceEECCCCC---------cCcccceecCH-HHHHHHhCCCCCCCHHH
Confidence             999999999999999999999999 54 555444320         11235566889 99999999999998876

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=9.1e-40  Score=273.75  Aligned_cols=260  Identities=19%  Similarity=0.244  Sum_probs=207.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++| .|+++++........+           ...++++.+|+.| +++.++++  ++|+|||+|
T Consensus         7 TGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-----------~~~~~~~~~Dl~~-~~~~~~~~--~~d~vih~a   71 (313)
T 3ehe_A            7 TGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-----------NEAARLVKADLAA-DDIKDYLK--GAEEVWHIA   71 (313)
T ss_dssp             ETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-----------CTTEEEECCCTTT-SCCHHHHT--TCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-----------CCCcEEEECcCCh-HHHHHHhc--CCCEEEECC
Confidence            7999999999999999999 5556555443322222           2578999999999 88999998  999999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhh-
Q 023110           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-  140 (287)
                      +..                +.++.++++++.  ++++|||+||..+||.....+++|+.+..|.+.| .+|..+|.+++ 
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  151 (313)
T 3ehe_A           72 ANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIES  151 (313)
T ss_dssp             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            852                345778899887  7889999999999998887889999888888877 99999998874 


Q ss_pred             ---hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcC-CCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEec
Q 023110          141 ---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  216 (287)
Q Consensus       141 ---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~  216 (287)
                         +.+++++++||+++|||+....++..++..+..+ .++.+++++++.++++|++|+|++++.+++.. ..+++||++
T Consensus       152 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~ni~  230 (313)
T 3ehe_A          152 YCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGD-ERVNIFNIG  230 (313)
T ss_dssp             HHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCC-SSEEEEECC
T ss_pred             HHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccC-CCCceEEEC
Confidence               4689999999999999987666777777777666 56667789999999999999999999999843 367899999


Q ss_pred             CCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          217 GEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       217 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +++.+|+.|+++.+++.+|.+. .+...+....       .........+|+ +|++ +|||+|++++++
T Consensus       231 ~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~-------~~~~~~~~~~d~-~k~~-~lG~~p~~~~~e  290 (313)
T 3ehe_A          231 SEDQIKVKRIAEIVCEELGLSP-RFRFTGGDRG-------WKGDVPVMLLSI-EKLK-RLGWKPRYNSEE  290 (313)
T ss_dssp             CSCCEEHHHHHHHHHHHTTCCC-EEEEC-------------------CCBCC-HHHH-HHTCCCSCCHHH
T ss_pred             CCCCeeHHHHHHHHHHHhCCCC-ceEECCCccC-------CccccceeccCH-HHHH-HcCCCCCCCHHH
Confidence            9999999999999999999875 5544332110       111223456788 9996 599999999876

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-39  Score=275.97  Aligned_cols=270  Identities=17%  Similarity=0.170  Sum_probs=212.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++++++|+++|++|++++|+.........    ........+++++.+|+.|++++.++++..++|+|||+|
T Consensus        11 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   86 (341)
T 3enk_A           11 TGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIA----RIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHFA   86 (341)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHH----HHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEECC
T ss_pred             ecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHH----HHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEECc
Confidence            7999999999999999999999999998765321111    000111357899999999999999999877899999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhh
Q 023110           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~  141 (287)
                      +..                +.++.+++++++  ++++||++||..+||.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        87 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~  166 (341)
T 3enk_A           87 ALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRD  166 (341)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHH
T ss_pred             cccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHH
Confidence            873                345778888876  7789999999999998887889999998888877 999999998853


Q ss_pred             ----C-CCcEEEEecCeeecCCCC-----------CChhHHHHHHHHcC-CCccCCC------CCCceeeeeeHHHHHHH
Q 023110          142 ----K-GVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAG-RPIPIPG------SGIQVTQLGHVKDLARA  198 (287)
Q Consensus       142 ----~-~~~~~ilR~~~v~g~~~~-----------~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~D~a~~  198 (287)
                          . +++++++||+++|||+..           ..+.+.+....... .++.+++      ++++.++++|++|+|++
T Consensus       167 ~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a  246 (341)
T 3enk_A          167 VEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARG  246 (341)
T ss_dssp             HHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHH
T ss_pred             HhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHH
Confidence                3 499999999999999531           23444444433332 3455555      78899999999999999


Q ss_pred             HHHHHcCC--ccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcC
Q 023110          199 FVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSL  276 (287)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l  276 (287)
                      ++.++++.  ...+++||+++++.+|+.|+++.+.+.+|.+. .+...+..          +.......+|+ +|++++|
T Consensus       247 ~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~----------~~~~~~~~~d~-~k~~~~l  314 (341)
T 3enk_A          247 HIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAV-PYELVARR----------PGDVAECYANP-AAAAETI  314 (341)
T ss_dssp             HHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCC-CEEEECCC----------TTCCSEECBCC-HHHHHHH
T ss_pred             HHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCc-ceeeCCCC----------CCCccccccCH-HHHHHHc
Confidence            99999762  34678999999999999999999999999876 33333221          11234566888 9999999


Q ss_pred             CCcccccccc
Q 023110          277 TWWKVLQTHT  286 (287)
Q Consensus       277 g~~p~~~~~~  286 (287)
                      ||+|++++++
T Consensus       315 G~~p~~~l~~  324 (341)
T 3enk_A          315 GWKAERDLER  324 (341)
T ss_dssp             CCCCCCCHHH
T ss_pred             CCCCCCCHHH
Confidence            9999999876

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=1.1e-38  Score=267.96  Aligned_cols=260  Identities=17%  Similarity=0.138  Sum_probs=211.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|+... ..              .+++++.+|+.|++++.++++..++|+|||+|
T Consensus        18 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~--------------l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   82 (321)
T 2pk3_A           18 TGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL--------------PNVEMISLDIMDSQRVKKVISDIKPDYIFHLA   82 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC--------------TTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc--------------ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcC
Confidence            7999999999999999999999999998654 11              16789999999999999999844499999999


Q ss_pred             CCC----------------cccHHHHHHhCC---CCccEEEEecceeeccC--CCCCCCCCCCCCCCcch-hhhHHHHHH
Q 023110           81 GRE----------------ADEVEPILDALP---NLEQFIYCSSAGVYLKS--DLLPHCETDTVDPKSRH-KGKLNTESV  138 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~--~~~~~~e~~~~~~~~~~-~~k~~~E~~  138 (287)
                      +..                +.++.+++++++   ++++|||+||..+|+..  ...+++|+++..|.+.| .+|..+|.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~  162 (321)
T 2pk3_A           83 AKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGML  162 (321)
T ss_dssp             SCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHH
T ss_pred             cccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence            863                234677888876   47899999999999876  56688999888887777 999999998


Q ss_pred             hhh----CCCcEEEEecCeeecCCCCC-ChhHHHHHHHHc---C--CCccCCCCCCceeeeeeHHHHHHHHHHHHcCCcc
Q 023110          139 LES----KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKA---G--RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       139 ~~~----~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (287)
                      ++.    .+++++++||+++|||+... .+...++..+..   +  .++..+++++..++++|++|+|++++.+++++. 
T Consensus       163 ~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-  241 (321)
T 2pk3_A          163 ARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGK-  241 (321)
T ss_dssp             HHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCCC-
Confidence            854    38999999999999997543 345556666655   6  466666788889999999999999999998763 


Q ss_pred             CCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          209 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       209 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      .+++||+++++.+|+.|+++.+.+.+|.+. .+...+...        .+.......+|+ +|++++|||+|++++++
T Consensus       242 ~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~~--------~~~~~~~~~~d~-~k~~~~lG~~p~~~~~e  309 (321)
T 2pk3_A          242 TGDVYNVCSGIGTRIQDVLDLLLAMANVKI-DTELNPLQL--------RPSEVPTLIGSN-KRLKDSTGWKPRIPLEK  309 (321)
T ss_dssp             TTCEEEESCSCEEEHHHHHHHHHHHSSSCC-EEEECGGGC--------CSSCCSBCCBCC-HHHHHHHCCCCCSCHHH
T ss_pred             CCCeEEeCCCCCeeHHHHHHHHHHHhCCCC-ceeeccccC--------CCcccchhccCH-HHHHHHcCCCcCCCHHH
Confidence            578999999999999999999999999865 444433210        111234566888 99999999999998875

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=5.6e-39  Score=273.22  Aligned_cols=272  Identities=19%  Similarity=0.174  Sum_probs=213.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhh-hhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|+++|+++|++|++++|+.......+.... ..+. ....+++++.+|+.|.+++.++++  ++|+|||+
T Consensus        33 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~  109 (352)
T 1sb8_A           33 TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVR-SLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVDYVLHQ  109 (352)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH-HHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHh-hhcccccCCceEEEECCCCCHHHHHHHhc--CCCEEEEC
Confidence            7999999999999999999999999997643111110000 0000 002578999999999999999998  99999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhh
Q 023110           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE  140 (287)
Q Consensus        80 a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~  140 (287)
                      |+..                +.++.++++++.  ++++|||+||..+|+.....+++|+++..|.+.| .+|..+|.+++
T Consensus       110 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~  189 (352)
T 1sb8_A          110 AALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYAD  189 (352)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHH
T ss_pred             CcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence            9863                345678888876  7889999999999998777789999988888777 99999999874


Q ss_pred             ----hCCCcEEEEecCeeecCCCCC-----ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC-ccCC
Q 023110          141 ----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE-KASR  210 (287)
Q Consensus       141 ----~~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~-~~~~  210 (287)
                          +.+++++++||+.+|||+...     .++..++..+..+.++.+++++++.++++|++|+|++++.++.+. ...+
T Consensus       190 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~  269 (352)
T 1sb8_A          190 VFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARN  269 (352)
T ss_dssp             HHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCS
T ss_pred             HHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCC
Confidence                358999999999999997532     355667777778887777788889999999999999999998763 3467


Q ss_pred             ceEEecCCcccCHHHHHHHHHHHh---CCCCCeE-EeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          211 QVFNISGEKYVTFDGLARACAKAA---GFPEPEL-VHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       211 ~~~~i~~~~~~s~~e~~~~i~~~~---g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      ++||+++++.+|+.|+++.+.+.+   |.+.+.. ...+   .       .+.......+|+ +|++++|||+|++++++
T Consensus       270 ~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~---~-------~~~~~~~~~~d~-~k~~~~lG~~p~~~~~e  338 (352)
T 1sb8_A          270 QVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRD---F-------REGDVRHSLADI-SKAAKLLGYAPKYDVSA  338 (352)
T ss_dssp             EEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEEC---C-------CTTCCSBCCBCC-HHHHHHTCCCCCCCHHH
T ss_pred             ceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecC---C-------CccchhhccCCH-HHHHHHhCCCCCCCHHH
Confidence            899999999999999999999999   8765311 1000   0       011124456788 99999999999998876

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=1.4e-38  Score=268.47  Aligned_cols=263  Identities=17%  Similarity=0.231  Sum_probs=208.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|+.....+.+           ..+++++.+|+.|.+.+.++++..++|+|||+|
T Consensus         7 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a   75 (330)
T 2c20_A            7 CGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI-----------TEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFA   75 (330)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGS-----------CTTSEEEECCTTCHHHHHHHHHHSCEEEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhc-----------CCCcEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence            799999999999999999999999999765432222           137889999999999999999766899999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhh
Q 023110           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~  141 (287)
                      +..                +.++.++++++.  ++++|||+||..+|+.....+++|+++..|.+.| .+|..+|.+++.
T Consensus        76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  155 (330)
T 2c20_A           76 ADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHW  155 (330)
T ss_dssp             CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             cccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHH
Confidence            864                235678888876  7789999999999998777789999988887777 999999998753


Q ss_pred             ----CCCcEEEEecCeeecCCC----------CCChhHHHHHHHHcC-CCccCCC------CCCceeeeeeHHHHHHHHH
Q 023110          142 ----KGVNWTSLRPVYIYGPLN----------YNPVEEWFFHRLKAG-RPIPIPG------SGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       142 ----~~~~~~ilR~~~v~g~~~----------~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~D~a~~~~  200 (287)
                          .+++++++||+++|||+.          ...+...++...... ..+.+++      ++++.++++|++|+|++++
T Consensus       156 ~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~  235 (330)
T 2c20_A          156 YSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHF  235 (330)
T ss_dssp             HHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHH
T ss_pred             HHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHH
Confidence                589999999999999962          123445455444432 3455544      6778999999999999999


Q ss_pred             HHHcCCcc--CCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCC
Q 023110          201 QVLGNEKA--SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTW  278 (287)
Q Consensus       201 ~~~~~~~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  278 (287)
                      .+++++..  .+++||+++++.+|+.|+++.+.+.+|.+. .+...+..          ........+|+ +|++++|||
T Consensus       236 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~----------~~~~~~~~~d~-~k~~~~lG~  303 (330)
T 2c20_A          236 LGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEI-PAEVAPRR----------AGDPARLVASS-QKAKEKLGW  303 (330)
T ss_dssp             HHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCC-CEEEECCC----------SSCCSEECBCC-HHHHHHHCC
T ss_pred             HHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCC-ceeeCCCC----------CCcccccccCH-HHHHHHhCC
Confidence            99976432  368999999999999999999999999875 33322211          11224566888 999999999


Q ss_pred             cccc-cccc
Q 023110          279 WKVL-QTHT  286 (287)
Q Consensus       279 ~p~~-~~~~  286 (287)
                      +|++ ++++
T Consensus       304 ~p~~~~l~~  312 (330)
T 2c20_A          304 DPRYVNVKT  312 (330)
T ss_dssp             CCSCCCHHH
T ss_pred             CCccCCHHH
Confidence            9998 8765

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=8.2e-39  Score=267.71  Aligned_cols=259  Identities=22%  Similarity=0.222  Sum_probs=208.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++++++|+++|++|++++|........+           ..+++++.+|+.|++++.++++..++|+|||+|
T Consensus         6 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a   74 (311)
T 2p5y_A            6 TGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV-----------PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQA   74 (311)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS-----------CTTCCEECCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc-----------ccCeEEEECCCCCHHHHHHHHHhcCCCEEEECc
Confidence            799999999999999999999999998543322222           146788999999999999998755799999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCccEEEEecc-eeecc-CCCCCCCCCCCCCCCcch-hhhHHHHHHh
Q 023110           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSA-GVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~-~v~~~-~~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (287)
                      +..                +.++.++++++.  ++++||++||. .+|+. ....+++|+++..|.+.| .+|..+|.++
T Consensus        75 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  154 (311)
T 2p5y_A           75 AQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYL  154 (311)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Confidence            863                234678888876  77899999999 89986 555578888887777766 9999999887


Q ss_pred             h----hCCCcEEEEecCeeecCCCCC----ChhHHHHHHHHcCCCccCC-----CCCCceeeeeeHHHHHHHHHHHHcCC
Q 023110          140 E----SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIP-----GSGIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       140 ~----~~~~~~~ilR~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (287)
                      +    +.+++++++||+++|||+...    .+...++..+..+.++.++     +++.+.++++|++|+|++++.+++++
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  234 (311)
T 2p5y_A          155 SVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL  234 (311)
T ss_dssp             HHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC
Confidence            4    358999999999999997532    2456667777777776666     77788999999999999999998764


Q ss_pred             ccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          207 KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       207 ~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                         +++||+++++.+|+.|+++.+.+.+|.+. .+...+...          .......+|+ +|+++ |||+|++++++
T Consensus       235 ---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~----------~~~~~~~~d~-~k~~~-lg~~p~~~~~~  298 (311)
T 2p5y_A          235 ---EGIYNVGTGEGHTTREVLMAVAEAAGKAP-EVQPAPPRP----------GDLERSVLSP-LKLMA-HGWRPKVGFQE  298 (311)
T ss_dssp             ---CEEEEESCSCCEEHHHHHHHHHHHHTCCC-CEEEECCCT----------TCCSBCCBCC-HHHHT-TTCCCSSCHHH
T ss_pred             ---CCEEEeCCCCCccHHHHHHHHHHHhCCCC-CceeCCCCc----------cchhhccCCH-HHHHH-CCCCCCCCHHH
Confidence               68999999999999999999999999875 333333211          1124566888 99999 99999999875

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=1e-38  Score=273.96  Aligned_cols=261  Identities=18%  Similarity=0.246  Sum_probs=203.7

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|+++|+++| ++|++++|+.......+..         ..+++++.+|+.|++.+.++++  ++|+|||+
T Consensus        38 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~---------~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vih~  106 (377)
T 2q1s_A           38 VGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPD---------HPAVRFSETSITDDALLASLQD--EYDYVFHL  106 (377)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCC---------CTTEEEECSCTTCHHHHHHCCS--CCSEEEEC
T ss_pred             ECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccC---------CCceEEEECCCCCHHHHHHHhh--CCCEEEEC
Confidence            7999999999999999999 9999999986653222220         2578999999999999999998  99999999


Q ss_pred             CCCC----------------cccHHHHHHhCC---CCccEEEEecceeeccCCCCCCC--CCC---CC-CCCcch-hhhH
Q 023110           80 NGRE----------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC--ETD---TV-DPKSRH-KGKL  133 (287)
Q Consensus        80 a~~~----------------~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~--e~~---~~-~~~~~~-~~k~  133 (287)
                      |+..                +.++.++++++.   ++++|||+||..+|+.....+++  |+.   +. .|.+.| .+|.
T Consensus       107 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~  186 (377)
T 2q1s_A          107 ATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKI  186 (377)
T ss_dssp             CCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHH
T ss_pred             CCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHH
Confidence            9864                335788999876   46899999999999977666777  776   55 666666 9999


Q ss_pred             HHHHHhhh----CCCcEEEEecCeeecCCC---------C-----CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          134 NTESVLES----KGVNWTSLRPVYIYGPLN---------Y-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       134 ~~E~~~~~----~~~~~~ilR~~~v~g~~~---------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      .+|.+++.    .+++++++||+.+|||+.         .     ..+...++..+..+.++.+++++++.++++|++|+
T Consensus       187 ~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dv  266 (377)
T 2q1s_A          187 FGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDV  266 (377)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHH
Confidence            99998753    489999999999999975         2     34567788888888888777888899999999999


Q ss_pred             HHH-HHHHHcCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccc-cccccchhhhh
Q 023110          196 ARA-FVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQ-LRRQSMCSDGN  273 (287)
Q Consensus       196 a~~-~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~k~~  273 (287)
                      |++ ++.+++++. .+ +||+++++.+|+.|+++.+.+.+|.+. .+...+..          +.... ...+|+ +|++
T Consensus       267 a~a~i~~~~~~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~----------~~~~~~~~~~d~-~k~~  332 (377)
T 2q1s_A          267 ANGLIACAADGTP-GG-VYNIASGKETSIADLATKINEITGNNT-ELDRLPKR----------PWDNSGKRFGSP-EKAR  332 (377)
T ss_dssp             HHHHHHHHHHCCT-TE-EEECCCCCCEEHHHHHHHHHHHHTCCS-CCCCCCCC----------GGGCC-CCCCCC-HHHH
T ss_pred             HHHHHHHHHhcCC-CC-eEEecCCCceeHHHHHHHHHHHhCCCC-CceeCCCC----------ccccccccccCH-HHHH
Confidence            999 999998865 56 999999999999999999999999865 33322211          11123 566888 9999


Q ss_pred             hcCCCcccccccc
Q 023110          274 LSLTWWKVLQTHT  286 (287)
Q Consensus       274 ~~lg~~p~~~~~~  286 (287)
                      ++|||+|++++++
T Consensus       333 ~~lG~~p~~~l~e  345 (377)
T 2q1s_A          333 RELGFSADVSIDD  345 (377)
T ss_dssp             HHHCCCCCCCHHH
T ss_pred             HHcCCCCCCCHHH
Confidence            9999999998875

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=3.1e-38  Score=267.07  Aligned_cols=266  Identities=18%  Similarity=0.263  Sum_probs=213.2

Q ss_pred             CCcccchHHHHHHHHHHc---C---CeEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCc
Q 023110            1 MGGTRFIGVFLSRLLVKE---G---HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~---g---~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~   73 (287)
                      ||||||||++|+++|+++   |   ++|++++|+.... ...+..     +. ...+++++.+|+.|++++.+++.  ++
T Consensus         6 TGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~-----~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~   77 (337)
T 1r6d_A            6 TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAP-----VD-ADPRLRFVHGDIRDAGLLARELR--GV   77 (337)
T ss_dssp             ETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGG-----GT-TCTTEEEEECCTTCHHHHHHHTT--TC
T ss_pred             ECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhh-----cc-cCCCeEEEEcCCCCHHHHHHHhc--CC
Confidence            799999999999999997   8   9999999975321 111110     00 02578999999999999999997  99


Q ss_pred             cEEEecCCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHH
Q 023110           74 DVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (287)
Q Consensus        74 d~vi~~a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (287)
                      |+|||+|+..                +.++.++++++.  ++++|||+||..+||.....+++|+++..|.+.| .+|..
T Consensus        78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~  157 (337)
T 1r6d_A           78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAG  157 (337)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHH
T ss_pred             CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHH
Confidence            9999999863                345778999877  7789999999999987666678898888887777 99999


Q ss_pred             HHHHhh----hCCCcEEEEecCeeecCCCC-CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccC
Q 023110          135 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       135 ~E~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (287)
                      +|.+++    +.+++++++||+.+|||+.. ..+...++..+..+.++.+++++++.++++|++|+|++++.+++++. .
T Consensus       158 ~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~  236 (337)
T 1r6d_A          158 SDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-A  236 (337)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-T
T ss_pred             HHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC-C
Confidence            998874    35899999999999999754 34566677778888877777888889999999999999999997654 5


Q ss_pred             CceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          210 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       210 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +++||+++++.+|+.|+++.+.+.+|.+.+.+...+..          +.......+|+ +|++++|||+|++++++
T Consensus       237 g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----------~~~~~~~~~d~-~k~~~~lG~~p~~~~~e  302 (337)
T 1r6d_A          237 GEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADR----------KGHDLRYSLDG-GKIERELGYRPQVSFAD  302 (337)
T ss_dssp             TCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCC----------TTCCCBCCBCC-HHHHHHHCCCCCSCHHH
T ss_pred             CCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCCC----------CCCcceeecCH-HHHHHHcCCCCCCCHHH
Confidence            78999999999999999999999999875333322111          11123455788 99999999999998875

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=4.5e-38  Score=265.99  Aligned_cols=266  Identities=23%  Similarity=0.250  Sum_probs=210.2

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCcc-ccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      |||+||||++|+++|+++|  ++|++++|.... ..+.+.....      ..+++++.+|+.|.+.+.+++.  ++|+||
T Consensus         9 TGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi   80 (336)
T 2hun_A            9 TGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLED------DPRYTFVKGDVADYELVKELVR--KVDGVV   80 (336)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTT------CTTEEEEECCTTCHHHHHHHHH--TCSEEE
T ss_pred             ECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhcc------CCceEEEEcCCCCHHHHHHHhh--CCCEEE
Confidence            7999999999999999996  999999997532 1111211100      2578999999999999999997  999999


Q ss_pred             ecCCCC----------------cccHHHHHHhCC--CC-ccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHH
Q 023110           78 DINGRE----------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        78 ~~a~~~----------------~~~~~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (287)
                      |+|+..                +.++.++++++.  +. ++|||+||..+||.....+++|+++..|.+.| .+|..+|.
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (336)
T 2hun_A           81 HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDM  160 (336)
T ss_dssp             ECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHH
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHH
Confidence            999873                234778888876  43 79999999999997666688998888777777 99999998


Q ss_pred             Hhh----hCCCcEEEEecCeeecCCCC-CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCce
Q 023110          138 VLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV  212 (287)
Q Consensus       138 ~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~  212 (287)
                      +++    +.+++++++||+.+|||+.. ..+...++..+..+..+++++++.+.++++|++|+|++++.+++++. .+++
T Consensus       161 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~g~~  239 (336)
T 2hun_A          161 LVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE-SREI  239 (336)
T ss_dssp             HHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred             HHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC-CCCE
Confidence            875    36899999999999999754 34566677788888877777888889999999999999999997654 6789


Q ss_pred             EEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          213 FNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       213 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      ||+++++.+|+.|+++.+++.+|.+.+.+...+..          +.......+|+ +|++++|||+|++++++
T Consensus       240 ~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----------~~~~~~~~~d~-~k~~~~lG~~p~~~~~~  302 (336)
T 2hun_A          240 YNISAGEEKTNLEVVKIILRLMGKGEELIELVEDR----------PGHDLRYSLDS-WKITRDLKWRPKYTFDE  302 (336)
T ss_dssp             EEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCC----------TTCCCCCCBCC-HHHHHHHCCCCSSCHHH
T ss_pred             EEeCCCCcccHHHHHHHHHHHhCCCcccccccCCC----------CCchhhhcCCH-HHHHHHhCCCCCCCHHH
Confidence            99999999999999999999999875433322211          11123456788 99999999999998875

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-38  Score=268.17  Aligned_cols=269  Identities=17%  Similarity=0.167  Sum_probs=209.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh--hcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|+++|+++|++|++++|+......       ..+..  ...+++++.+|+.|.+++.++++..++|+|||
T Consensus        20 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih   92 (335)
T 1rpn_A           20 TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR-------WRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN   92 (335)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC-------HHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc-------cchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence            7999999999999999999999999998654110       00000  02578999999999999999998545799999


Q ss_pred             cCCCC----------------cccHHHHHHhCC--CC-ccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHH
Q 023110           79 INGRE----------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (287)
Q Consensus        79 ~a~~~----------------~~~~~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~  138 (287)
                      +|+..                +.++.++++++.  ++ ++|||+||..+|+.....+++|+++..|.+.| .+|..+|.+
T Consensus        93 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~  172 (335)
T 1rpn_A           93 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWI  172 (335)
T ss_dssp             CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHH
Confidence            99863                234678888877  65 89999999999998777788999988888777 999999998


Q ss_pred             hhh----CCCcEEEEecCeeecCCCCCCh----hHHHHHHHHcCCC-ccCCCCCCceeeeeeHHHHHHHHHHHHcCCccC
Q 023110          139 LES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       139 ~~~----~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (287)
                      ++.    .+++++++||+++|||+....+    +..++..+..+.. ...++++++.++++|++|+|++++.+++++.  
T Consensus       173 ~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~--  250 (335)
T 1rpn_A          173 TVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--  250 (335)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--
T ss_pred             HHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC--
Confidence            753    4899999999999999754333    3445555566653 3345788899999999999999999998765  


Q ss_pred             CceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          210 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       210 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +++||+++++.+|+.|+++.+.+.+|.+.+....+.....       .+.......+|+ +|++++|||+|++++++
T Consensus       251 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~~d~-~k~~~~lG~~p~~~l~e  319 (335)
T 1rpn_A          251 ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFF-------RPAEVDVLLGNP-AKAQRVLGWKPRTSLDE  319 (335)
T ss_dssp             CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGC-------CSSCCCBCCBCT-HHHHHHHCCCCCSCHHH
T ss_pred             CCEEEEeCCCCccHHHHHHHHHHHhCCCcccccccccccc-------CCCcchhhcCCH-HHHHHhcCCCcCCCHHH
Confidence            3799999999999999999999999976321111111111       111224456788 99999999999998876

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=9.1e-39  Score=264.33  Aligned_cols=243  Identities=19%  Similarity=0.143  Sum_probs=203.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      || +||||++|+++|+++|++|++++|+.+..               ..+++++.+|+.|.+.+.++++. ++|+|||+|
T Consensus         9 tG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------~~~~~~~~~Dl~d~~~~~~~~~~-~~d~vih~a   71 (286)
T 3gpi_A            9 AG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------------PAGVQTLIADVTRPDTLASIVHL-RPEILVYCV   71 (286)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------------CTTCCEEECCTTCGGGCTTGGGG-CCSEEEECH
T ss_pred             EC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------ccCCceEEccCCChHHHHHhhcC-CCCEEEEeC
Confidence            68 59999999999999999999999987652               25788999999999999999982 399999998


Q ss_pred             CC-----------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhhCCCcE
Q 023110           81 GR-----------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNW  146 (287)
Q Consensus        81 ~~-----------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~~~~~  146 (287)
                      +.           |+.++.++++++.  ++++|||+||..+|+.....+++|+++..|.+.| .+|..+|.+ .+. +++
T Consensus        72 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~~~  149 (286)
T 3gpi_A           72 AASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-YSS  149 (286)
T ss_dssp             HHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-SSE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-CCe
Confidence            64           4667999999988  7799999999999998887889999999888887 999999999 777 999


Q ss_pred             EEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC--ccCCceEEecCCcccCHH
Q 023110          147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVTFD  224 (287)
Q Consensus       147 ~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s~~  224 (287)
                      +++||+++|||+..     .++..+.+ ..  ..++++..++++|++|+|++++.+++++  ...+++||+++++.+|+.
T Consensus       150 ~ilR~~~v~G~~~~-----~~~~~~~~-~~--~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  221 (286)
T 3gpi_A          150 TILRFSGIYGPGRL-----RMIRQAQT-PE--QWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVH  221 (286)
T ss_dssp             EEEEECEEEBTTBC-----HHHHHTTC-GG--GSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHH
T ss_pred             EEEecccccCCCch-----hHHHHHHh-cc--cCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHH
Confidence            99999999999743     34444444 22  2367788999999999999999999874  346789999999999999


Q ss_pred             HHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccc-cccc
Q 023110          225 GLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVL-QTHT  286 (287)
Q Consensus       225 e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~-~~~~  286 (287)
                      |+++.+++.+|.+. .+...+             .......+|+ +|++ +|||+|++ ++++
T Consensus       222 e~~~~i~~~~g~~~-~~~~~~-------------~~~~~~~~d~-~k~~-~lG~~p~~~~l~e  268 (286)
T 3gpi_A          222 DLLRWLADRQGIAY-PAGATP-------------PVQGNKKLSN-ARLL-ASGYQLIYPDYVS  268 (286)
T ss_dssp             HHHHHHHHHTTCCC-CCSCCC-------------CBCSSCEECC-HHHH-HTTCCCSSCSHHH
T ss_pred             HHHHHHHHHcCCCC-CCCCCc-------------ccCCCeEeeH-HHHH-HcCCCCcCCcHHH
Confidence            99999999999865 222111             1234556888 9998 89999999 4765

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=7.3e-38  Score=265.91  Aligned_cols=273  Identities=19%  Similarity=0.185  Sum_probs=208.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccccc--CCCCChhhhhh-hcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ--LPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      ||||||||++|+++|+++|++|++++|+.......  ... ....+.. ...+++++.+|+.|.+++.++++..++|+||
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   86 (348)
T 1ek6_A            8 TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPE-SLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVI   86 (348)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBH-HHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHH-HHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            79999999999999999999999999875430000  000 0001111 1247899999999999999999866799999


Q ss_pred             ecCCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCC-Ccch-hhhHHHHH
Q 023110           78 DINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-KGKLNTES  137 (287)
Q Consensus        78 ~~a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~-~~k~~~E~  137 (287)
                      |+|+..                +.++.++++++.  ++++|||+||..+|+.....+++|+++..| .+.| .+|..+|.
T Consensus        87 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~  166 (348)
T 1ek6_A           87 HFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEE  166 (348)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred             ECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHH
Confidence            999863                235778888876  778999999999999877778999988777 5556 99999999


Q ss_pred             HhhhC---C--CcEEEEecCeeecCCC-----------CCChhHHHHHHHH-cCCCccCCC------CCCceeeeeeHHH
Q 023110          138 VLESK---G--VNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHVKD  194 (287)
Q Consensus       138 ~~~~~---~--~~~~ilR~~~v~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~D  194 (287)
                      +++..   +  ++++++||+++|||+.           ...+...++..+. .+.++.+++      ++++.++++|++|
T Consensus       167 ~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D  246 (348)
T 1ek6_A          167 MIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVD  246 (348)
T ss_dssp             HHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHH
T ss_pred             HHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHH
Confidence            87531   4  9999999999999842           1235555666665 555565554      5678999999999


Q ss_pred             HHHHHHHHHcCCc-cCC-ceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhh
Q 023110          195 LARAFVQVLGNEK-ASR-QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDG  272 (287)
Q Consensus       195 ~a~~~~~~~~~~~-~~~-~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~  272 (287)
                      +|++++.+++++. ..+ ++||+++++.+|+.|+++.+.+.+|.+. .+...+..          ........+|+ +|+
T Consensus       247 va~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~----------~~~~~~~~~d~-~k~  314 (348)
T 1ek6_A          247 LAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI-PYKVVARR----------EGDVAACYANP-SLA  314 (348)
T ss_dssp             HHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCC-CEEEECCC----------TTCCSEECBCC-HHH
T ss_pred             HHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCC-ceeeCCCC----------CccchhhccCH-HHH
Confidence            9999999997642 234 7999999999999999999999999875 33332211          11124556888 999


Q ss_pred             hhcCCCcccccccc
Q 023110          273 NLSLTWWKVLQTHT  286 (287)
Q Consensus       273 ~~~lg~~p~~~~~~  286 (287)
                      +++|||+|++++++
T Consensus       315 ~~~lG~~p~~~l~~  328 (348)
T 1ek6_A          315 QEELGWTAALGLDR  328 (348)
T ss_dssp             HHTTCCCCCCCHHH
T ss_pred             HHhcCCCCCCCHHH
Confidence            99999999999875

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=8.7e-38  Score=265.46  Aligned_cols=264  Identities=17%  Similarity=0.190  Sum_probs=210.3

Q ss_pred             CCcccchHHHHHHHHHHc--CCeEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      |||+||||++|+++|+++  |++|++++|+.... ...+..     +  ...+++++.+|+.|++++.++++  ++|+||
T Consensus        10 TGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~-----~--~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi   80 (348)
T 1oc2_A           10 TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA-----I--LGDRVELVVGDIADAELVDKLAA--KADAIV   80 (348)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG-----G--CSSSEEEEECCTTCHHHHHHHHT--TCSEEE
T ss_pred             eCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhh-----h--ccCCeEEEECCCCCHHHHHHHhh--cCCEEE
Confidence            799999999999999999  89999999975321 111110     0  02578999999999999999998  889999


Q ss_pred             ecCCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCC------------CCCCCCCCCCCCc
Q 023110           78 DINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL------------LPHCETDTVDPKS  127 (287)
Q Consensus        78 ~~a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~------------~~~~e~~~~~~~~  127 (287)
                      |+|+..                +.++.++++++.  ++ +|||+||..+||....            .+++|+++..|.+
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~  159 (348)
T 1oc2_A           81 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSS  159 (348)
T ss_dssp             ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCS
T ss_pred             ECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCC
Confidence            999864                234778888877  66 9999999999986532            5788888887777


Q ss_pred             ch-hhhHHHHHHhhh----CCCcEEEEecCeeecCCCC-CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          128 RH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       128 ~~-~~k~~~E~~~~~----~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      .| .+|..+|.+++.    .+++++++||+.+|||+.. ..+...++..+..+.++.+++++.+.++++|++|+|++++.
T Consensus       160 ~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  239 (348)
T 1oc2_A          160 PYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA  239 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHH
Confidence            77 999999988753    4899999999999999754 34566677777788777777888889999999999999999


Q ss_pred             HHcCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCccc
Q 023110          202 VLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKV  281 (287)
Q Consensus       202 ~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~  281 (287)
                      +++++. .+++||++++..+|+.|+++.+.+.+|.+.+.+...+..          +.......+|+ +|++++|||+|+
T Consensus       240 ~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----------~~~~~~~~~d~-~k~~~~lG~~p~  307 (348)
T 1oc2_A          240 ILTKGR-MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDR----------AGHDLRYAIDA-SKLRDELGWTPQ  307 (348)
T ss_dssp             HHHHCC-TTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCC----------TTCCCBCCBCC-HHHHHHHCCCCS
T ss_pred             HhhCCC-CCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCC----------CCcccccccCH-HHHHHHcCCCCC
Confidence            997654 678999999999999999999999999865322221110          11123455788 999999999999


Q ss_pred             cc-ccc
Q 023110          282 LQ-THT  286 (287)
Q Consensus       282 ~~-~~~  286 (287)
                      ++ +++
T Consensus       308 ~~~~~~  313 (348)
T 1oc2_A          308 FTDFSE  313 (348)
T ss_dssp             CCCHHH
T ss_pred             CCcHHH
Confidence            98 765

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=9.1e-39  Score=264.33  Aligned_cols=255  Identities=19%  Similarity=0.215  Sum_probs=201.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||| ||||++|+++|+++|++|++++|+..... .+.          ..+++++.+|+.|.+     ++  ++|+|||+|
T Consensus        11 tGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~----------~~~~~~~~~D~~d~~-----~~--~~d~vi~~a   71 (286)
T 3ius_A           11 FGH-GYTARVLSRALAPQGWRIIGTSRNPDQME-AIR----------ASGAEPLLWPGEEPS-----LD--GVTHLLIST   71 (286)
T ss_dssp             ETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHH-HHH----------HTTEEEEESSSSCCC-----CT--TCCEEEECC
T ss_pred             ECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhh-hHh----------hCCCeEEEecccccc-----cC--CCCEEEECC
Confidence            698 99999999999999999999999876521 111          257999999999854     55  899999999


Q ss_pred             CCCc---ccHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhhC-CCcEEEEec
Q 023110           81 GREA---DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK-GVNWTSLRP  151 (287)
Q Consensus        81 ~~~~---~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~-~~~~~ilR~  151 (287)
                      +...   ..+.+++++++    ++++|||+||.++|+.....+++|+++..|.+.| .+|+.+|.++++. +++++++||
T Consensus        72 ~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp  151 (286)
T 3ius_A           72 APDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRL  151 (286)
T ss_dssp             CCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred             CccccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEec
Confidence            8753   23677887764    6789999999999998887789999999998877 9999999999887 999999999


Q ss_pred             CeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHH
Q 023110          152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (287)
Q Consensus       152 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~  231 (287)
                      +++|||+...      +..+..+....+.++ .+.++++|++|+|++++.+++++. .+++||+++++.+|+.|+++.+.
T Consensus       152 ~~v~G~~~~~------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~  223 (286)
T 3ius_A          152 AGIYGPGRGP------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD-PGAVYNVCDDEPVPPQDVIAYAA  223 (286)
T ss_dssp             CEEEBTTBSS------STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEECCSCCBCHHHHHHHHH
T ss_pred             cceECCCchH------HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC-CCCEEEEeCCCCccHHHHHHHHH
Confidence            9999997432      123345555555444 578999999999999999999877 67899999999999999999999


Q ss_pred             HHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccc-cccc
Q 023110          232 KAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVL-QTHT  286 (287)
Q Consensus       232 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~-~~~~  286 (287)
                      +.+|.+.+...+......  +.. ..........+|+ +|++++|||+|++ ++++
T Consensus       224 ~~~g~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~d~-~k~~~~lG~~p~~p~~~e  275 (286)
T 3ius_A          224 ELQGLPLPPAVDFDKADL--TPM-ARSFYSENKRVRN-DRIKEELGVRLKYPNYRV  275 (286)
T ss_dssp             HHHTCCCCCEEEGGGSCC--CHH-HHHTTSCCCEECC-HHHHHTTCCCCSCSSHHH
T ss_pred             HHcCCCCCcccchhhhcc--Chh-HHHhhcCCceeeh-HHHHHHhCCCCCcCCHHH
Confidence            999987643333222111  100 0011124556788 9999999999999 5775

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-38  Score=263.89  Aligned_cols=246  Identities=13%  Similarity=0.105  Sum_probs=207.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++++++|+++|++|++++|.                          .+|+.|.+.+.++++..++|+|||+|
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~D~~d~~~~~~~~~~~~~d~vi~~a   64 (287)
T 3sc6_A           11 TGANGQLGKQLQEELNPEEYDIYPFDKK--------------------------LLDITNISQVQQVVQEIRPHIIIHCA   64 (287)
T ss_dssp             ESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------------TSCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------------ccCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999999999992                          26889999999999865799999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhh
Q 023110           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~  141 (287)
                      +..                +.++.+++++++  ++ +|||+||..+|+.....+++|+++..|.+.| .+|..+|.+++.
T Consensus        65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  143 (287)
T 3sc6_A           65 AYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKE  143 (287)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            874                234678999987  65 7999999999998877899999999998877 999999999988


Q ss_pred             CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCccc
Q 023110          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (287)
Q Consensus       142 ~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~  221 (287)
                      ...+++++||+.+|||+. ..+...++..+..+.++.+.++  +.++++|++|+|++++.+++++.  +++||+++++.+
T Consensus       144 ~~~~~~ilR~~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~  218 (287)
T 3sc6_A          144 LHNKYFIVRTSWLYGKYG-NNFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTSL--YGTYHVSNTGSC  218 (287)
T ss_dssp             HCSSEEEEEECSEECSSS-CCHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTSCC--CEEEECCCBSCE
T ss_pred             hCCCcEEEeeeeecCCCC-CcHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhCCC--CCeEEEcCCCcc
Confidence            888999999999999964 3466777888877887777654  78999999999999999998876  679999999999


Q ss_pred             CHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          222 TFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       222 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      |+.|+++.+++.+|.+. .+.+.+...+...     ........+|+ +|++ +|||+|.+++++
T Consensus       219 s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~-----~~~~~~~~~d~-~k~~-~lg~~p~~~~~~  275 (287)
T 3sc6_A          219 SWFEFAKKIFSYANMKV-NVLPVSTEEFGAA-----AARPKYSIFQH-NMLR-LNGFLQMPSWEE  275 (287)
T ss_dssp             EHHHHHHHHHHHHTCCC-EEEEECHHHHCCS-----SCCCSBCCBCC-HHHH-HTTCCCCCBHHH
T ss_pred             cHHHHHHHHHHHcCCCc-ceeeeehhhcCcc-----cCCCCcccccH-HHHH-hhCCCCCccHHH
Confidence            99999999999999875 6666554432211     12234566888 9999 899999999876

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.1e-38  Score=267.47  Aligned_cols=252  Identities=16%  Similarity=0.177  Sum_probs=203.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|+      +....                ...++++.+|+.|++.+.++++..++|+|||+|
T Consensus        12 tGatG~iG~~l~~~L~~~g~------~~~~~----------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A   69 (319)
T 4b8w_A           12 TGGSGLVGKAIQKVVADGAG------LPGED----------------WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLA   69 (319)
T ss_dssp             ETCSSHHHHHHHHHHHTTTC------CTTCE----------------EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhcCC------ccccc----------------ccccCceecccCCHHHHHHHHhhcCCCEEEECc
Confidence            79999999999999999998      21111                134455679999999999999965699999999


Q ss_pred             CCC-----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCC----CCCCCcc-h-hhhHHH
Q 023110           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKSR-H-KGKLNT  135 (287)
Q Consensus        81 ~~~-----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~----~~~~~~~-~-~~k~~~  135 (287)
                      +..                 +.++.+++++++  ++++|||+||..+|+.....+++|++    ++.|.++ | .+|..+
T Consensus        70 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  149 (319)
T 4b8w_A           70 AMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMI  149 (319)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHH
T ss_pred             eecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHH
Confidence            873                 235778999987  78899999999999988888899987    6666653 5 999999


Q ss_pred             HHHhh----hCCCcEEEEecCeeecCCCC-----CChhHHHHHH----HHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          136 ESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHR----LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       136 E~~~~----~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      |.+++    +.+++++++||+++|||+..     ..+++.++..    +..++++.+++++++.++++|++|+|++++.+
T Consensus       150 E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~  229 (319)
T 4b8w_A          150 DVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWV  229 (319)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHH
Confidence            98874    36899999999999999753     2355666666    77888888888999999999999999999999


Q ss_pred             HcCCc-cCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCccc
Q 023110          203 LGNEK-ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKV  281 (287)
Q Consensus       203 ~~~~~-~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~  281 (287)
                      ++++. ..+++||+++++.+|+.|+++.+.+.+|.+. .+...+...          .......+|+ +|++++|||+|.
T Consensus       230 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~----------~~~~~~~~d~-~k~~~~lg~~p~  297 (319)
T 4b8w_A          230 LREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHG-EVTFDTTKS----------DGQFKKTASN-SKLRTYLPDFRF  297 (319)
T ss_dssp             HHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCS-CEEEETTSC----------CCCSCCCBCC-HHHHHHCTTCCC
T ss_pred             HhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCC-cEEeCCCCC----------cCcccccCCH-HHHHHhcCCCCC
Confidence            98743 3567999999999999999999999999876 444333211          1123456889 999999999999


Q ss_pred             ccccc
Q 023110          282 LQTHT  286 (287)
Q Consensus       282 ~~~~~  286 (287)
                      +++++
T Consensus       298 ~~~~~  302 (319)
T 4b8w_A          298 TPFKQ  302 (319)
T ss_dssp             CCHHH
T ss_pred             CCHHH
Confidence            98876

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=5.1e-38  Score=266.52  Aligned_cols=271  Identities=18%  Similarity=0.222  Sum_probs=207.0

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC-hHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d-~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|+++|+++ |++|++++|+.........          ..+++++.+|+.| .+.+.++++  ++|+|||
T Consensus         6 tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~--~~d~vih   73 (345)
T 2bll_A            6 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP   73 (345)
T ss_dssp             ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----------CTTEEEEECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc----------CCCeEEEeccccCcHHHHHhhcc--CCCEEEE
Confidence            799999999999999998 8999999998765322222          3578999999998 467888888  8999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCC-------CCCcch-hhh
Q 023110           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGK  132 (287)
Q Consensus        79 ~a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~~~~~~-~~k  132 (287)
                      +|+..                +.++.++++++.  + ++|||+||..+|+.....+++|+++.       .|.+.| .+|
T Consensus        74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK  152 (345)
T 2bll_A           74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK  152 (345)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHH
T ss_pred             cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHH
Confidence            99863                234677888876  5 89999999999998766677787653       233345 899


Q ss_pred             HHHHHHhh----hCCCcEEEEecCeeecCCCC---------CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          133 LNTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       133 ~~~E~~~~----~~~~~~~ilR~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      ..+|.+++    +.+++++++||+.+|||+..         ..++..++..+..+.++.+++++++.++++|++|+|+++
T Consensus       153 ~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  232 (345)
T 2bll_A          153 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL  232 (345)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHH
Confidence            99998874    45899999999999999743         234566777778888877777888899999999999999


Q ss_pred             HHHHcCCc--cCCceEEecCCc-ccCHHHHHHHHHHHhCCCCCeEEeCCccccc--cCCCc---ccccccccccccchhh
Q 023110          200 VQVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKAAGFPEPELVHYNPKEFD--FGKKK---AFPFRDQLRRQSMCSD  271 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~k  271 (287)
                      +.+++++.  ..+++||+++++ .+|+.|+++.+.+.+|.+.+. ...+.....  .....   ..........+|+ +|
T Consensus       233 ~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~k  310 (345)
T 2bll_A          233 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR-HHFPPFAGFRVVESSSYYGKGYQDVEHRKPSI-RN  310 (345)
T ss_dssp             HHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTG-GGSCCCCCEEEC------------CCCCCBCC-HH
T ss_pred             HHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCccc-ccCccccccccccchhhccccccchhhhcccH-HH
Confidence            99998764  357899999986 899999999999999876422 122211100  00000   0001124456788 99


Q ss_pred             hhhcCCCcccccccc
Q 023110          272 GNLSLTWWKVLQTHT  286 (287)
Q Consensus       272 ~~~~lg~~p~~~~~~  286 (287)
                      ++++|||+|++++++
T Consensus       311 ~~~~lG~~p~~~l~~  325 (345)
T 2bll_A          311 AHRCLDWEPKIDMQE  325 (345)
T ss_dssp             HHHHHCCCCCCCHHH
T ss_pred             HHHhcCCCccccHHH
Confidence            999999999998875

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=6.8e-38  Score=269.02  Aligned_cols=258  Identities=19%  Similarity=0.226  Sum_probs=207.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|+....... .          ..+++++.+|+.|.+++.++++  ++|+|||+|
T Consensus        35 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~----------~~~v~~~~~Dl~d~~~~~~~~~--~~d~Vih~A  101 (379)
T 2c5a_A           35 TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-D----------MFCDEFHLVDLRVMENCLKVTE--GVDHVFNLA  101 (379)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-G----------GTCSEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-c----------cCCceEEECCCCCHHHHHHHhC--CCCEEEECc
Confidence            79999999999999999999999999987552111 0          2478999999999999999998  999999999


Q ss_pred             CCC-----------------cccHHHHHHhCC--CCccEEEEecceeeccCCC-----CCCCCCC--CCCCCcch-hhhH
Q 023110           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL-----LPHCETD--TVDPKSRH-KGKL  133 (287)
Q Consensus        81 ~~~-----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~-----~~~~e~~--~~~~~~~~-~~k~  133 (287)
                      +..                 +.++.++++++.  ++++|||+||..+|+....     .+++|++  +..|.+.| .+|.
T Consensus       102 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~  181 (379)
T 2c5a_A          102 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL  181 (379)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred             eecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHH
Confidence            853                 224678888876  7789999999999986432     3466665  45566666 9999


Q ss_pred             HHHHHhh----hCCCcEEEEecCeeecCCCCC-----ChhHHHHHHHHcCCC-ccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          134 NTESVLE----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       134 ~~E~~~~----~~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      .+|.+++    +.+++++++||+.+|||+...     .+...++..+..+.+ +.+++++++.++++|++|+|++++.++
T Consensus       182 ~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l  261 (379)
T 2c5a_A          182 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT  261 (379)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHh
Confidence            9998874    358999999999999997432     256667777777765 666788889999999999999999999


Q ss_pred             cCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCccccc
Q 023110          204 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQ  283 (287)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~  283 (287)
                      +++  .+++||+++++.+|+.|+++.+.+.+|.+. .+...+...           ......+|+ +|++++|||+|+++
T Consensus       262 ~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~~-----------~~~~~~~d~-~k~~~~lG~~p~~~  326 (379)
T 2c5a_A          262 KSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKL-PIHHIPGPE-----------GVRGRNSDN-NLIKEKLGWAPNMR  326 (379)
T ss_dssp             HSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCC-CEEEECCCC-----------CCSBCEECC-HHHHHHHSCCCCCC
T ss_pred             hcc--CCCeEEeCCCCccCHHHHHHHHHHHhCCCC-ceeeCCCCC-----------CcccccCCH-HHHHHHhCCCCCCC
Confidence            876  467999999999999999999999999876 444433321           113345788 99999999999998


Q ss_pred             ccc
Q 023110          284 THT  286 (287)
Q Consensus       284 ~~~  286 (287)
                      +++
T Consensus       327 l~e  329 (379)
T 2c5a_A          327 LKE  329 (379)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=1e-37  Score=265.93  Aligned_cols=268  Identities=14%  Similarity=0.179  Sum_probs=208.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++|+++|+++|++|++++|+.........     .+ ....+++++.+|+.|++++.++++..++|+|||+|
T Consensus        15 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   88 (357)
T 1rkx_A           15 TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFE-----TA-RVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   88 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHH-----HT-TTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhH-----hh-ccCCceEEEEccccCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999999999998755221100     00 01257899999999999999999844589999999


Q ss_pred             CCC----------------cccHHHHHHhCC--C-CccEEEEecceeeccCCC-CCCCCCCCCCCCcch-hhhHHHHHHh
Q 023110           81 GRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL-LPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~-~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (287)
                      +..                +.++.++++++.  + +++|||+||..+||.... .+++|+++..|.+.| .+|..+|.++
T Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  168 (357)
T 1rkx_A           89 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT  168 (357)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred             CCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence            852                345677888876  4 789999999999987553 467888777777776 9999999987


Q ss_pred             hhC-------------CCcEEEEecCeeecCCCC--CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          140 ESK-------------GVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       140 ~~~-------------~~~~~ilR~~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      +..             +++++++||+.+|||+..  ..++..++..+..+.++.+. ++++.++++|++|+|++++.+++
T Consensus       169 ~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~v~v~Dva~a~~~~~~  247 (357)
T 1rkx_A          169 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIR-NPHAIRPWQHVLEPLSGYLLLAQ  247 (357)
T ss_dssp             HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECS-CTTCEECCEETHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEEC-CCCCeeccEeHHHHHHHHHHHHH
Confidence            532             899999999999999753  35677788888888876654 56788999999999999999887


Q ss_pred             C----CccCCceEEecCC--cccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCC
Q 023110          205 N----EKASRQVFNISGE--KYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTW  278 (287)
Q Consensus       205 ~----~~~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  278 (287)
                      +    +...+++||++++  +.+|+.|+++.+.+.+|.+. .+...+..         .+.......+|+ +|++++|||
T Consensus       248 ~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~---------~~~~~~~~~~d~-~k~~~~lG~  316 (357)
T 1rkx_A          248 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA-SWQLDGNA---------HPHEAHYLKLDC-SKAKMQLGW  316 (357)
T ss_dssp             HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC-CEEC----------------CCCCCCBCC-HHHHHHHCC
T ss_pred             hhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCC-ccccCCCC---------CCcCcccccCCH-HHHHHHhCC
Confidence            4    2235789999984  67999999999999999865 33322110         011234566888 999999999


Q ss_pred             cccccccc
Q 023110          279 WKVLQTHT  286 (287)
Q Consensus       279 ~p~~~~~~  286 (287)
                      +|++++++
T Consensus       317 ~p~~~l~e  324 (357)
T 1rkx_A          317 HPRWNLNT  324 (357)
T ss_dssp             CCCCCHHH
T ss_pred             CcCCcHHH
Confidence            99998876

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=2.4e-38  Score=265.90  Aligned_cols=253  Identities=19%  Similarity=0.249  Sum_probs=206.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcc---ccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP---IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      ||||||||++|+++|+++|++|++++|+...   ....+....      ...+++++.+|+.            ++|+||
T Consensus        13 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~------------~~d~vi   74 (321)
T 3vps_A           13 TGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL------EKPVLELEERDLS------------DVRLVY   74 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE------CSCGGGCCHHHHT------------TEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc------cCCCeeEEeCccc------------cCCEEE
Confidence            7999999999999999999999999998762   111111000      0134555555553            799999


Q ss_pred             ecCCCC---------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHh
Q 023110           78 DINGRE---------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        78 ~~a~~~---------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (287)
                      |+|+..               +.++.++++++.  ++++|||+||..+|+.....+++|+++..|.+.| .+|..+|.++
T Consensus        75 ~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  154 (321)
T 3vps_A           75 HLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVA  154 (321)
T ss_dssp             ECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             ECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            999863               345688999987  8899999999999998888889999999888877 9999999988


Q ss_pred             hh----CCC-cEEEEecCeeecCCCC-CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceE
Q 023110          140 ES----KGV-NWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (287)
Q Consensus       140 ~~----~~~-~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (287)
                      +.    .++ +++++||+.+|||+.. ..+...++..+..++++.+++++++.++++|++|+|++++.+++++.. | +|
T Consensus       155 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-g-~~  232 (321)
T 3vps_A          155 GAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-S-VV  232 (321)
T ss_dssp             HHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-S-EE
T ss_pred             HHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-C-eE
Confidence            54    688 9999999999999754 356777888888888888888899999999999999999999998774 6 99


Q ss_pred             EecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcc-cccccc
Q 023110          214 NISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWK-VLQTHT  286 (287)
Q Consensus       214 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p-~~~~~~  286 (287)
                      |+++++.+|+.|+++.+. .+|.+. .+...+...          .......+|+ +|++++|||+| ++++++
T Consensus       233 ~i~~~~~~s~~e~~~~i~-~~g~~~-~~~~~~~~~----------~~~~~~~~d~-~k~~~~lG~~p~~~~~~~  293 (321)
T 3vps_A          233 NFGSGQSLSVNDVIRILQ-ATSPAA-EVARKQPRP----------NEITEFRADT-ALQTRQIGERSGGIGIEE  293 (321)
T ss_dssp             EESCSCCEEHHHHHHHHH-TTCTTC-EEEEECCCT----------TCCSBCCBCC-HHHHHHHCCCSCCCCHHH
T ss_pred             EecCCCcccHHHHHHHHH-HhCCCC-ccccCCCCC----------CCcceeeccH-HHHHHHhCCCCCcCCHHH
Confidence            999999999999999999 999876 555444321          1235667889 99999999999 888875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2e-37  Score=262.58  Aligned_cols=262  Identities=16%  Similarity=0.145  Sum_probs=203.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|+..... .+.          ..+++++.+|+.|.+++.++++  ++|+|||+|
T Consensus        19 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~l~----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~a   85 (342)
T 2x4g_A           19 LGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQ-RLA----------YLEPECRVAEMLDHAGLERALR--GLDGVIFSA   85 (342)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGG-GGG----------GGCCEEEECCTTCHHHHHHHTT--TCSEEEEC-
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEecChHhhh-hhc----------cCCeEEEEecCCCHHHHHHHHc--CCCEEEECC
Confidence            799999999999999999999999999876521 111          2378999999999999999998  899999999


Q ss_pred             CCC--------------cccHHHHHHhCC--CCccEEEEecceeeccCCC--CCCCCCCCCCC----Ccch-hhhHHHHH
Q 023110           81 GRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL--LPHCETDTVDP----KSRH-KGKLNTES  137 (287)
Q Consensus        81 ~~~--------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~--~~~~e~~~~~~----~~~~-~~k~~~E~  137 (287)
                      +..              +.++.++++++.  ++++|||+||..+|+....  .+ +|+++..|    .+.| .+|..+|.
T Consensus        86 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~~~e~  164 (342)
T 2x4g_A           86 GYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKWALDE  164 (342)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHHHHHH
T ss_pred             ccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHHHHHHHHH
Confidence            852              345778999887  7899999999999987554  44 88888887    6666 99999999


Q ss_pred             Hhhh---CCCcEEEEecCeeecCCC-CCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceE
Q 023110          138 VLES---KGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (287)
Q Consensus       138 ~~~~---~~~~~~ilR~~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (287)
                      +++.   .+++++++||+.+|||+. ... ...++..+..+....+   +++.++++|++|+|++++.+++++.. +++|
T Consensus       165 ~~~~~~~~g~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~-g~~~  239 (342)
T 2x4g_A          165 QAREQARNGLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI-GERY  239 (342)
T ss_dssp             HHHHHHHTTCCEEEEEECEEECSCCSSCS-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT-TCEE
T ss_pred             HHHHHhhcCCcEEEEeCCceECCCCcccc-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC-CceE
Confidence            8754   389999999999999975 323 4556677777765544   46789999999999999999987664 7899


Q ss_pred             EecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccc------------cCCC-----cccccccccccccchhhhhhcC
Q 023110          214 NISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD------------FGKK-----KAFPFRDQLRRQSMCSDGNLSL  276 (287)
Q Consensus       214 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~------------~~~~-----~~~~~~~~~~~~~~~~k~~~~l  276 (287)
                      |+++++ +|+.|+++.+.+.+|.+. .+ ..+.....            .+..     ...........+|+ +|++++|
T Consensus       240 ~v~~~~-~s~~e~~~~i~~~~g~~~-~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~k~~~~l  315 (342)
T 2x4g_A          240 LLTGHN-LEMADLTRRIAELLGQPA-PQ-PMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDG-RKAREEL  315 (342)
T ss_dssp             EECCEE-EEHHHHHHHHHHHHTCCC-CE-EECHHHHHHHHHHHHC----------------CCTTCCCCBCC-HHHHHHH
T ss_pred             EEcCCc-ccHHHHHHHHHHHhCCCC-CC-cCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccCh-HHHHHhC
Confidence            999999 999999999999999876 44 55443211            0100     00001124566888 9999999


Q ss_pred             CC-cccccccc
Q 023110          277 TW-WKVLQTHT  286 (287)
Q Consensus       277 g~-~p~~~~~~  286 (287)
                      || +| +++++
T Consensus       316 G~~~p-~~~~~  325 (342)
T 2x4g_A          316 GFFST-TALDD  325 (342)
T ss_dssp             CCCCC-SCHHH
T ss_pred             CCCCC-CCHHH
Confidence            99 99 88875

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=2.3e-37  Score=267.46  Aligned_cols=273  Identities=19%  Similarity=0.254  Sum_probs=205.0

Q ss_pred             CCcccchHHHHHHHHH-HcCCeEEEEEcCCccccc-cCCCCChhhh----hhh-----cCC---eEEEEecCCChHHHHh
Q 023110            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQ-QLPGESDQEF----AEF-----SSK---ILHLKGDRKDYDFVKS   66 (287)
Q Consensus         1 tGatG~iG~~l~~~l~-~~g~~V~~~~r~~~~~~~-~~~~~~~~~~----~~~-----~~~---~~~i~~D~~d~~~~~~   66 (287)
                      |||+||||++|+++|+ ++|++|++++|+...... .... ....+    ...     ..+   ++++.+|+.|++++.+
T Consensus         8 TGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   86 (397)
T 1gy8_A            8 CGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVE-TRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNG   86 (397)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSC-CHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccc-hHHHHHHHHHHhhccccccCCceEEEEECCCCCHHHHHH
Confidence            7999999999999999 999999999997644100 0000 00001    000     124   8899999999999999


Q ss_pred             hhhcCC-ccEEEecCCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCC-------CCCCCCC
Q 023110           67 SLSAKG-FDVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD-------LLPHCET  120 (287)
Q Consensus        67 ~~~~~~-~d~vi~~a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~-------~~~~~e~  120 (287)
                      +++..+ +|+|||+|+..                +.++.++++++.  ++++|||+||..+|+...       ..+++|+
T Consensus        87 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~  166 (397)
T 1gy8_A           87 VFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDIN  166 (397)
T ss_dssp             HHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTT
T ss_pred             HHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccccCcCcc
Confidence            997656 99999999864                345778888876  778999999999998765       5688999


Q ss_pred             CCCCCCcch-hhhHHHHHHhhh----CCCcEEEEecCeeecCCC----------CCChhHHHH----HHHHcCC------
Q 023110          121 DTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLN----------YNPVEEWFF----HRLKAGR------  175 (287)
Q Consensus       121 ~~~~~~~~~-~~k~~~E~~~~~----~~~~~~ilR~~~v~g~~~----------~~~~~~~~~----~~~~~~~------  175 (287)
                      ++..|.+.| .+|..+|.+++.    .+++++++||+++|||+.          ...++..++    ..+..+.      
T Consensus       167 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (397)
T 1gy8_A          167 AKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHE  246 (397)
T ss_dssp             SCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-------
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCcccccc
Confidence            888887776 999999998753    489999999999999963          123444444    1333343      


Q ss_pred             ------CccCCC------CCCceeeeeeHHHHHHHHHHHHcCCccC-----C---ceEEecCCcccCHHHHHHHHHHHhC
Q 023110          176 ------PIPIPG------SGIQVTQLGHVKDLARAFVQVLGNEKAS-----R---QVFNISGEKYVTFDGLARACAKAAG  235 (287)
Q Consensus       176 ------~~~~~~------~~~~~~~~i~~~D~a~~~~~~~~~~~~~-----~---~~~~i~~~~~~s~~e~~~~i~~~~g  235 (287)
                            ++.+++      ++++.++++|++|+|++++.+++++...     +   ++||+++++.+|+.|+++.+.+.+|
T Consensus       247 ~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g  326 (397)
T 1gy8_A          247 DASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTG  326 (397)
T ss_dssp             ----CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHC
T ss_pred             ccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHHHHHhC
Confidence                  354554      6778999999999999999998764322     3   7999999999999999999999999


Q ss_pred             CCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccc-cccc
Q 023110          236 FPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVL-QTHT  286 (287)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~-~~~~  286 (287)
                      .+. .+...+..          ........+|+ +|++++|||+|++ ++++
T Consensus       327 ~~~-~~~~~~~~----------~~~~~~~~~d~-~k~~~~lG~~p~~~~l~e  366 (397)
T 1gy8_A          327 HPI-PVRECGRR----------EGDPAYLVAAS-DKAREVLGWKPKYDTLEA  366 (397)
T ss_dssp             CCC-CEEEECCC----------TTCCSEECBCC-HHHHHHTCCCCSCCSHHH
T ss_pred             CCC-CeeeCCCC----------CCcccccccCH-HHHHHHhCCCCCcCCHHH
Confidence            875 33332211          11224566888 9999999999998 8775

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-37  Score=261.90  Aligned_cols=268  Identities=18%  Similarity=0.282  Sum_probs=204.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|+++|+++|++|++++|+.... ....     ..+.. ..+++++.+|+.|.+++.++++..++|+|||+
T Consensus         7 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (347)
T 1orr_A            7 TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNL-----HWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   80 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHH-----HHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             eCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhh-----hhhcc-CCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence            79999999999999999999999999864221 1000     00110 24688999999999999999983339999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CCc-cEEEEecceeeccCCCCC----------------CCCCCCCC
Q 023110           80 NGRE----------------ADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLP----------------HCETDTVD  124 (287)
Q Consensus        80 a~~~----------------~~~~~~ll~~~~--~~~-~~i~~Ss~~v~~~~~~~~----------------~~e~~~~~  124 (287)
                      |+..                +.++.++++++.  +++ +|||+||..+|+.....+                ++|+.+..
T Consensus        81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  160 (347)
T 1orr_A           81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD  160 (347)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred             CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCC
Confidence            9863                234678888876  664 899999999998654322                56666666


Q ss_pred             CCcch-hhhHHHHHHhhh----CCCcEEEEecCeeecCCCCC----ChhHHHHHHHHcCC-----CccCCCCCCceeeee
Q 023110          125 PKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGR-----PIPIPGSGIQVTQLG  190 (287)
Q Consensus       125 ~~~~~-~~k~~~E~~~~~----~~~~~~ilR~~~v~g~~~~~----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i  190 (287)
                      |.+.| .+|..+|.+++.    .+++++++||+.+|||+...    .++..++.....+.     ++.+++++++.++++
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  240 (347)
T 1orr_A          161 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVL  240 (347)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeE
Confidence            77666 999999998754    48999999999999997432    24555665555554     566678889999999


Q ss_pred             eHHHHHHHHHHHHcC-CccCCceEEecCCc--ccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCccccccccccccc
Q 023110          191 HVKDLARAFVQVLGN-EKASRQVFNISGEK--YVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQS  267 (287)
Q Consensus       191 ~~~D~a~~~~~~~~~-~~~~~~~~~i~~~~--~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (287)
                      |++|+|++++.++++ ....+++||++++.  .+|+.|+++.+.+.+|.+. .+...+..          ........+|
T Consensus       241 ~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~----------~~~~~~~~~d  309 (347)
T 1orr_A          241 HAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM-RFTNLPVR----------ESDQRVFVAD  309 (347)
T ss_dssp             EHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCC-CEEEECCC----------SSCCSEECBC
T ss_pred             EHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCC-CceeCCCC----------CCCcceeecC
Confidence            999999999999986 23467899999987  4999999999999999875 44433311          1122445678


Q ss_pred             chhhhhhcCCCcccccccc
Q 023110          268 MCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       268 ~~~k~~~~lg~~p~~~~~~  286 (287)
                      + +|++++|||+|++++++
T Consensus       310 ~-~k~~~~lG~~p~~~~~e  327 (347)
T 1orr_A          310 I-KKITNAIDWSPKVSAKD  327 (347)
T ss_dssp             C-HHHHHHHCCCCCSCHHH
T ss_pred             H-HHHHHHHCCCccCCHHH
Confidence            8 99999999999998875

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=1.3e-37  Score=258.94  Aligned_cols=252  Identities=17%  Similarity=0.118  Sum_probs=204.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||+|++|+++|+ +|++|++++|+..                      ++.+|+.|++++.++++..++|+|||+|
T Consensus         6 tGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------------~~~~D~~d~~~~~~~~~~~~~d~vih~a   62 (299)
T 1n2s_A            6 FGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------------EFCGDFSNPKGVAETVRKLRPDVIVNAA   62 (299)
T ss_dssp             ECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------------SSCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------------cccccCCCHHHHHHHHHhcCCCEEEECc
Confidence            7999999999999999 8999999999752                      1468999999999999844599999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhh
Q 023110           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~  141 (287)
                      +..                +.++.+++++++  ++ +|||+||..+|+.....+++|+++..|.+.| .+|..+|.+++.
T Consensus        63 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  141 (299)
T 1n2s_A           63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD  141 (299)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             ccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence            863                334788999987  55 8999999999998777789999988888777 999999999988


Q ss_pred             CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCc--c-CCceEEecCC
Q 023110          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--A-SRQVFNISGE  218 (287)
Q Consensus       142 ~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~-~~~~~~i~~~  218 (287)
                      ...+++++||+.+|||+.. .+...++..+..+.++.+.+  ++.++++|++|+|++++.+++++.  . .+++||++++
T Consensus       142 ~~~~~~ilRp~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~  218 (299)
T 1n2s_A          142 NCPKHLIFRTSWVYAGKGN-NFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAG  218 (299)
T ss_dssp             HCSSEEEEEECSEECSSSC-CHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCB
T ss_pred             hCCCeEEEeeeeecCCCcC-cHHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCC
Confidence            7779999999999999754 46667777777787766654  378999999999999999998752  2 4789999999


Q ss_pred             cccCHHHHHHHHHHHhCCCC-----CeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          219 KYVTFDGLARACAKAAGFPE-----PELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       219 ~~~s~~e~~~~i~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +.+|+.|+++.+.+.+|.+.     +.+.+.+...+.  .   .........+|+ +|++++|||+|+ ++++
T Consensus       219 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~d~-~k~~~~lG~~p~-~~~~  284 (299)
T 1n2s_A          219 GTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYP--T---PASRPGNSRLNT-EKFQRNFDLILP-QWEL  284 (299)
T ss_dssp             SCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSC--C---SSCCCSBCCBCC-HHHHHHHTCCCC-BHHH
T ss_pred             CCCCHHHHHHHHHHHhCCCcccccccccccccccccc--C---cCCCCCceeeeH-HHHHHhcCCCCC-CHHH
Confidence            99999999999999998763     244443322111  0   111235567888 999999999998 7765

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=8.6e-37  Score=264.40  Aligned_cols=273  Identities=16%  Similarity=0.164  Sum_probs=205.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccc------cCCCCC--hhhh----hhhcCCeEEEEecCCChHHHHhhh
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ------QLPGES--DQEF----AEFSSKILHLKGDRKDYDFVKSSL   68 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~------~~~~~~--~~~~----~~~~~~~~~i~~D~~d~~~~~~~~   68 (287)
                      ||||||||++|+++|+++|++|++++|.......      .+....  ....    .....+++++.+|+.|.+++.+++
T Consensus        17 TG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~   96 (404)
T 1i24_A           17 IGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESF   96 (404)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHHHHHHH
Confidence            7999999999999999999999999986432100      000000  0000    011357899999999999999999


Q ss_pred             hcCCccEEEecCCCC-------------------cccHHHHHHhCC--CC-ccEEEEecceeeccCCCCCCCCC------
Q 023110           69 SAKGFDVVYDINGRE-------------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCET------  120 (287)
Q Consensus        69 ~~~~~d~vi~~a~~~-------------------~~~~~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~------  120 (287)
                      +..++|+|||+|+..                   +.++.++++++.  +. ++||++||.++|+... .+++|+      
T Consensus        97 ~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~E~~~~~~~  175 (404)
T 1i24_A           97 KSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIEEGYITITH  175 (404)
T ss_dssp             HHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBCSSEEEEEE
T ss_pred             hccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCCCcccccccc
Confidence            843499999999863                   234667888876  55 5999999999998654 356665      


Q ss_pred             --------CCCCCCcch-hhhHHHHHHhhh----CCCcEEEEecCeeecCCCC------------------CChhHHHHH
Q 023110          121 --------DTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY------------------NPVEEWFFH  169 (287)
Q Consensus       121 --------~~~~~~~~~-~~k~~~E~~~~~----~~~~~~ilR~~~v~g~~~~------------------~~~~~~~~~  169 (287)
                              .+..|.+.| .+|..+|.+++.    .+++++++||+.||||+..                  ..++..++.
T Consensus       176 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (404)
T 1i24_A          176 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCV  255 (404)
T ss_dssp             TTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHH
T ss_pred             ccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHH
Confidence                    355566666 999999987743    4899999999999999753                  245677888


Q ss_pred             HHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCC--ceEEecCCcccCHHHHHHHHHHH---hCCCCCeEEeC
Q 023110          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKA---AGFPEPELVHY  244 (287)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~--~~~~i~~~~~~s~~e~~~~i~~~---~g~~~~~~~~~  244 (287)
                      .+..++++.+++++.+.++++|++|+|++++.+++++...+  ++||+++ +.+|+.|+++.+++.   +|.+. .+...
T Consensus       256 ~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~~~-~~~~~  333 (404)
T 1i24_A          256 QAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSKLGLDV-KKMTV  333 (404)
T ss_dssp             HHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHTTTCCC-CEEEE
T ss_pred             HHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHhhCCCc-ccccc
Confidence            88888887777888899999999999999999998765445  6999998 889999999999998   78765 33333


Q ss_pred             CccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          245 NPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +....        ........+|+ +|++ +|||+|++++++
T Consensus       334 p~~~~--------~~~~~~~~~d~-~k~~-~LG~~p~~~~~~  365 (404)
T 1i24_A          334 PNPRV--------EAEEHYYNAKH-TKLM-ELGLEPHYLSDS  365 (404)
T ss_dssp             CCSSC--------SCSSCCCCBCC-CHHH-HTTCCCCCCCHH
T ss_pred             CcccC--------ccccceEecCH-HHHH-HcCCCcCcCHHH
Confidence            32211        01123455788 9998 699999988765

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-37  Score=255.40  Aligned_cols=245  Identities=17%  Similarity=0.140  Sum_probs=202.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|+                          .+|+.|.+++.++++..++|+|||+|
T Consensus        18 tGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~Dl~d~~~~~~~~~~~~~d~vih~A   71 (292)
T 1vl0_A           18 TGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------------DLDITNVLAVNKFFNEKKPNVVINCA   71 (292)
T ss_dssp             ESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCeEEeccCc--------------------------cCCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999999999986                          16889999999998755799999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhh
Q 023110           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~  141 (287)
                      +..                +.++.++++++.  ++ +|||+||..+|+.....+++|+++..|.+.| .+|..+|.+++.
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  150 (292)
T 1vl0_A           72 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA  150 (292)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHh
Confidence            864                234678888887  66 9999999999998776789999988887777 999999999988


Q ss_pred             CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCccc
Q 023110          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (287)
Q Consensus       142 ~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~  221 (287)
                      ...+++++||+.+||| . ..+...++..+..+..+.+.+  ++.++++|++|+|++++.+++++  .+++||+++++.+
T Consensus       151 ~~~~~~~lR~~~v~G~-~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~~~~~~  224 (292)
T 1vl0_A          151 LNPKYYIVRTAWLYGD-G-NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTCKGIC  224 (292)
T ss_dssp             HCSSEEEEEECSEESS-S-SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT--CCEEEECCCBSCE
T ss_pred             hCCCeEEEeeeeeeCC-C-cChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC--CCcEEEecCCCCc
Confidence            7789999999999999 3 456666777777777665554  47899999999999999999875  5789999999999


Q ss_pred             CHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          222 TFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       222 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      |+.|+++.+.+.+|.+. .+.+.+...+..     .........+|+ +|++++|||+|+ ++++
T Consensus       225 s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~-----~~~~~~~~~~d~-~k~~~~lG~~p~-~~~~  281 (292)
T 1vl0_A          225 SWYDFAVEIFRLTGIDV-KVTPCTTEEFPR-----PAKRPKYSVLRN-YMLELTTGDITR-EWKE  281 (292)
T ss_dssp             EHHHHHHHHHHHHCCCC-EEEEECSTTSCC-----SSCCCSBCCBCC-HHHHHTTCCCCC-BHHH
T ss_pred             cHHHHHHHHHHHhCCCC-ceeeccccccCc-----ccCCCccccccH-HHHHHHcCCCCC-CHHH
Confidence            99999999999999875 555444332210     011234566889 999999999998 8875

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=4.8e-37  Score=262.12  Aligned_cols=275  Identities=19%  Similarity=0.212  Sum_probs=210.3

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCcc-ccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+||||++|+++|++. |++|++++|+... ....+....      ...+++++.+|+.|.+++.++++..++|+|||
T Consensus         6 TGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (361)
T 1kew_A            6 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS------ESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             ESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTT------TCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhh------cCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            799999999999999998 7999999997531 111221110      02478999999999999999987557999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC----CCc-------cEEEEecceeeccCCC--C--------CCCCCC
Q 023110           79 INGRE----------------ADEVEPILDALP----NLE-------QFIYCSSAGVYLKSDL--L--------PHCETD  121 (287)
Q Consensus        79 ~a~~~----------------~~~~~~ll~~~~----~~~-------~~i~~Ss~~v~~~~~~--~--------~~~e~~  121 (287)
                      +|+..                +.++.++++++.    +++       +|||+||..+||....  .        +++|++
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~  159 (361)
T 1kew_A           80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC
Confidence            99873                335777888875    455       9999999999986532  1        688888


Q ss_pred             CCCCCcch-hhhHHHHHHhhh----CCCcEEEEecCeeecCCCC-CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          122 TVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~~----~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      +..|.+.| .+|..+|.+++.    .+++++++||+.+|||+.. ..+...++..+..+.++.+++++.+.++++|++|+
T Consensus       160 ~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  239 (361)
T 1kew_A          160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHH
Confidence            87777777 999999998753    4899999999999999754 34566677777788777777888889999999999


Q ss_pred             HHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhc
Q 023110          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLS  275 (287)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  275 (287)
                      |++++.+++++. .+++||++++..+|+.|+++.+++.+|.+.+...+.. ....+..  ..+.......+|+ +|++++
T Consensus       240 a~a~~~~~~~~~-~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~-~~~~~~~--~~~~~~~~~~~d~-~k~~~~  314 (361)
T 1kew_A          240 ARALHMVVTEGK-AGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYR-EQITYVA--DRPGHDRRYAIDA-GKISRE  314 (361)
T ss_dssp             HHHHHHHHHHCC-TTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGG-GGEEEEC--CCTTCCCBCCBCC-HHHHHH
T ss_pred             HHHHHHHHhCCC-CCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccc-cceeecC--CCCcccceeecCH-HHHHHH
Confidence            999999997654 6789999999999999999999999986542211100 0000000  0111223456888 999999


Q ss_pred             CCCcccccccc
Q 023110          276 LTWWKVLQTHT  286 (287)
Q Consensus       276 lg~~p~~~~~~  286 (287)
                      |||+|++++++
T Consensus       315 lG~~p~~~~~e  325 (361)
T 1kew_A          315 LGWKPLETFES  325 (361)
T ss_dssp             HCCCCSCCHHH
T ss_pred             hCCCCccCHHH
Confidence            99999998875

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=8.5e-37  Score=257.51  Aligned_cols=255  Identities=16%  Similarity=0.148  Sum_probs=203.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++|+++|+++|++|++++|+.....+....         ..+++++.+|+.|.+++.++++..++|+|||+|
T Consensus        26 TGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   96 (330)
T 2pzm_A           26 TGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP---------VAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSA   96 (330)
T ss_dssp             ETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS---------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc---------cCCceEEEeeCCCHHHHHHHHhhcCCCEEEECC
Confidence            79999999999999999999999999976542211111         147889999999999999998755799999999


Q ss_pred             CCC-------------cccHHHHHHhCC--CCccEEEEecceeeccCCCC--CCCCCCCCCCCcch-hhhHHHHHHhhhC
Q 023110           81 GRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        81 ~~~-------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~--~~~e~~~~~~~~~~-~~k~~~E~~~~~~  142 (287)
                      +..             +.++.++++++.  ++++||++||..+|+.....  +++|++  .|.+.| .+|..+|.+++..
T Consensus        97 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~~~Y~~sK~~~e~~~~~~  174 (330)
T 2pzm_A           97 AAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APFTSYGISKTAGEAFLMMS  174 (330)
T ss_dssp             CCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCCSHHHHHHHHHHHHHHTC
T ss_pred             ccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCCChHHHHHHHHHHHHHHc
Confidence            863             345778888876  78899999999999875443  677776  455555 9999999999888


Q ss_pred             CCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH-HHHHHHcCCccCCceEEecCCccc
Q 023110          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR-AFVQVLGNEKASRQVFNISGEKYV  221 (287)
Q Consensus       143 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~-~~~~~~~~~~~~~~~~~i~~~~~~  221 (287)
                      +++++++||+++|||+....+...++..+..+.  ..++++. .++++|++|+|+ +++.+++++.  +++||+++++.+
T Consensus       175 ~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~--g~~~~v~~~~~~  249 (330)
T 2pzm_A          175 DVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP--TGVFNVSTGEGH  249 (330)
T ss_dssp             SSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC--CEEEEESCSCCE
T ss_pred             CCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC--CCEEEeCCCCCC
Confidence            999999999999999864456666677766665  4455666 889999999999 9999998754  889999999999


Q ss_pred             CHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhh-----hhcCCCcccccccc
Q 023110          222 TFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDG-----NLSLTWWKVLQTHT  286 (287)
Q Consensus       222 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-----~~~lg~~p~~~~~~  286 (287)
                      |+.|+++.+.+.+|.+  .+...+...           ......+|+ +|+     ++ |||+|++++++
T Consensus       250 s~~e~~~~i~~~~g~~--~~~~~~~~~-----------~~~~~~~d~-~k~~~~~l~~-lG~~p~~~~~~  304 (330)
T 2pzm_A          250 SIKEVFDVVLDYVGAT--LAEPVPVVA-----------PGADDVPSV-VLDPSKTETE-FGWKAKVDFKD  304 (330)
T ss_dssp             EHHHHHHHHHHHHTCC--CSSCCCEEC-----------CCTTSCSEE-CBCCHHHHHH-HCCCCCCCHHH
T ss_pred             CHHHHHHHHHHHhCCC--CceeCCCCc-----------chhhccCCH-HHHhhchHHH-cCCcccCCHHH
Confidence            9999999999999976  222222110           124556788 888     77 99999998875

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=1.3e-36  Score=257.21  Aligned_cols=269  Identities=21%  Similarity=0.264  Sum_probs=200.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh-cCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||+||||++++++|+++|++|++++|........+     ..+... ..+++++.+|+.|++++.++++..++|+|||+
T Consensus         6 TGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            6 TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVL-----PVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHH-----HHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHH-----HHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            799999999999999999999999987543211110     111111 24688999999999999999975569999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCC-Ccch-hhhHHHHHHh
Q 023110           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-KGKLNTESVL  139 (287)
Q Consensus        80 a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~-~~k~~~E~~~  139 (287)
                      |+..                +.++.+++++++  ++++||++||..+|+.....+++|+.+..| .+.| .+|..+|.++
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~  160 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHH
Confidence            9863                234677888876  788999999999998766667888877644 5555 9999999887


Q ss_pred             hh----C-CCcEEEEecCeeecCCC-----------CCChhHHHHHHHH-cCCCccCCC------CCCceeeeeeHHHHH
Q 023110          140 ES----K-GVNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHVKDLA  196 (287)
Q Consensus       140 ~~----~-~~~~~ilR~~~v~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~D~a  196 (287)
                      +.    . +++++++||+++|||+.           ...+...++.... .+..+.+++      ++.+.++++|++|+|
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva  240 (338)
T 1udb_A          161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA  240 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHH
T ss_pred             HHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHH
Confidence            43    3 79999999999999842           1234444544444 333443333      567889999999999


Q ss_pred             HHHHHHHcCC--ccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhh
Q 023110          197 RAFVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNL  274 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  274 (287)
                      ++++.++++.  ...+++||+++++.+|+.|+++.+.+.+|.+. .+...+..          ........+|+ +|+++
T Consensus       241 ~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~----------~~~~~~~~~d~-~k~~~  308 (338)
T 1udb_A          241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPV-NYHFAPRR----------EGDLPAYWADA-SKADR  308 (338)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCC-CEEEECCC----------TTCCSBCCBCC-HHHHH
T ss_pred             HHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCC-cceeCCCC----------CCchhhhhcCH-HHHHH
Confidence            9999988753  22237999999999999999999999999865 33322211          11123456788 99999


Q ss_pred             cCCCcccccccc
Q 023110          275 SLTWWKVLQTHT  286 (287)
Q Consensus       275 ~lg~~p~~~~~~  286 (287)
                      +|||+|++++++
T Consensus       309 ~lG~~p~~~l~~  320 (338)
T 1udb_A          309 ELNWRVTRTLDE  320 (338)
T ss_dssp             HHCCCCCCCHHH
T ss_pred             HcCCCcCCCHHH
Confidence            999999998876

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=4.3e-37  Score=257.32  Aligned_cols=261  Identities=13%  Similarity=0.058  Sum_probs=201.0

Q ss_pred             CCcccchHHHHHHHHHHc--CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|+++|+++  |++|++++|+.... . +           ..+++++.+|+.|.+++.++++..++|+|||
T Consensus         8 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~-~-----------~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   74 (312)
T 2yy7_A            8 IGACGQIGTELTQKLRKLYGTENVIASDIRKLNT-D-V-----------VNSGPFEVVNALDFNQIEHLVEVHKITDIYL   74 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC-H-H-----------HHSSCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             ECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc-c-c-----------cCCCceEEecCCCHHHHHHHHhhcCCCEEEE
Confidence            799999999999999999  89999999986541 0 0           1367889999999999999998678999999


Q ss_pred             cCCCC---------------cccHHHHHHhCC--CCccEEEEecceeeccCC-CCCCCCCCCCCCCcch-hhhHHHHHHh
Q 023110           79 INGRE---------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD-LLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        79 ~a~~~---------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~-~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (287)
                      +|+..               +.++.++++++.  ++++|||+||..+|+... ..+.+|+.+..|.+.| .+|..+|.++
T Consensus        75 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  154 (312)
T 2yy7_A           75 MAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWC  154 (312)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHH
T ss_pred             CCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHH
Confidence            99873               234678888876  778999999999998743 3467788777777777 9999999887


Q ss_pred             h----hCCCcEEEEecCeeecCCCCC-----C-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCcc-
Q 023110          140 E----SKGVNWTSLRPVYIYGPLNYN-----P-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA-  208 (287)
Q Consensus       140 ~----~~~~~~~ilR~~~v~g~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~-  208 (287)
                      +    +.+++++++||+.+|||+...     . +...+...+ .+..+..++++++.++++|++|+|++++.+++++.. 
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~  233 (312)
T 2yy7_A          155 EYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAI-ADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEK  233 (312)
T ss_dssp             HHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHH-HTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGG
T ss_pred             HHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHH-cCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccc
Confidence            4    348999999999999975211     1 233333333 444555667788899999999999999999987653 


Q ss_pred             --CCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          209 --SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       209 --~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                        .+++||+++ +.+|+.|+++.+.+.+|. . .+...+....       .........+|+ +|++++|||+|++++++
T Consensus       234 ~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~-~i~~~~~~~~-------~~~~~~~~~~d~-~k~~~~lG~~p~~~l~~  302 (312)
T 2yy7_A          234 IKIHSSYNLAA-MSFTPTEIANEIKKHIPE-F-TITYEPDFRQ-------KIADSWPASIDD-SQAREDWDWKHTFDLES  302 (312)
T ss_dssp             CCCSSCEECCS-EEECHHHHHHHHHTTCTT-C-EEEECCCTHH-------HHHTTSCSSBCC-HHHHHHHCCCCCCCHHH
T ss_pred             cccCceEEeCC-CccCHHHHHHHHHHHCCC-C-ceEeccCccc-------cccccccccCCH-HHHHHHcCCCCCCCHHH
Confidence              247999997 889999999999999983 2 4433322100       000112345788 99999999999999876

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=1.7e-36  Score=257.09  Aligned_cols=258  Identities=20%  Similarity=0.281  Sum_probs=202.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|+.......+..+     . ...+++++.+|+.+..     +.  ++|+|||+|
T Consensus        33 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-----~-~~~~~~~~~~D~~~~~-----~~--~~d~vih~A   99 (343)
T 2b69_A           33 TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW-----I-GHENFELINHDVVEPL-----YI--EVDQIYHLA   99 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG-----T-TCTTEEEEECCTTSCC-----CC--CCSEEEECC
T ss_pred             EcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh-----c-cCCceEEEeCccCChh-----hc--CCCEEEECc
Confidence            799999999999999999999999999754322211100     0 0257899999998753     44  899999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCC-----CCCCCCcch-hhhHHHH
Q 023110           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCET-----DTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~-----~~~~~~~~~-~~k~~~E  136 (287)
                      +..                +.++.++++++.  ++ +|||+||..+|+.....+++|+     .+..|.+.| .+|..+|
T Consensus       100 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  178 (343)
T 2b69_A          100 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAE  178 (343)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHH
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHH
Confidence            863                234678888877  54 9999999999987766677777     345555556 9999999


Q ss_pred             HHhh----hCCCcEEEEecCeeecCCCC---CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccC
Q 023110          137 SVLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       137 ~~~~----~~~~~~~ilR~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (287)
                      .+++    +.+++++++||+.+|||+..   ..++..++..+..++++.+++++++.++++|++|+|++++.+++.+.  
T Consensus       179 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--  256 (343)
T 2b69_A          179 TMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV--  256 (343)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC--
T ss_pred             HHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC--
Confidence            8874    45899999999999999743   34566677777888887777888899999999999999999997653  


Q ss_pred             CceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          210 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       210 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +++||+++++.+|+.|+++.+.+.+|.+. .+...+....          ......+|+ +|++++|||+|++++++
T Consensus       257 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~~~----------~~~~~~~d~-~k~~~~lG~~p~~~l~e  321 (343)
T 2b69_A          257 SSPVNLGNPEEHTILEFAQLIKNLVGSGS-EIQFLSEAQD----------DPQKRKPDI-KKAKLMLGWEPVVPLEE  321 (343)
T ss_dssp             CSCEEESCCCEEEHHHHHHHHHHHHTCCC-CEEEECCCTT----------CCCCCCBCC-HHHHHHHCCCCCSCHHH
T ss_pred             CCeEEecCCCCCcHHHHHHHHHHHhCCCC-CceeCCCCCC----------CCceecCCH-HHHHHHcCCCCCCCHHH
Confidence            57999999999999999999999999876 4444332211          123455788 99999999999998875

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=2.2e-36  Score=255.26  Aligned_cols=258  Identities=19%  Similarity=0.174  Sum_probs=202.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|+.....+.+..         ..+++++.+|+.|.+++.++++..++|+|||+|
T Consensus        27 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~---------~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   97 (333)
T 2q1w_A           27 TGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD---------HPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA   97 (333)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC---------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh---------cCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence            79999999999999999999999999986543222321         147889999999999999999833399999999


Q ss_pred             CCC-------------cccHHHHHHhCC--CCccEEEEecceeec----cCCCCCCCCCCCCCCC-cch-hhhHHHHHHh
Q 023110           81 GRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYL----KSDLLPHCETDTVDPK-SRH-KGKLNTESVL  139 (287)
Q Consensus        81 ~~~-------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~----~~~~~~~~e~~~~~~~-~~~-~~k~~~E~~~  139 (287)
                      +..             +.++.++++++.  ++++|||+||..+|+    .... +++|++  .|. +.| .+|..+|.++
T Consensus        98 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~~~~Y~~sK~~~E~~~  174 (333)
T 2q1w_A           98 ASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPANSSYAISKSANEDYL  174 (333)
T ss_dssp             CCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCTTCHHHHHHHHHHHHH
T ss_pred             eecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCCCCchHHHHHHHHHHH
Confidence            863             245778888876  778999999999998    5444 777776  555 555 9999999999


Q ss_pred             hh-CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCC
Q 023110          140 ES-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE  218 (287)
Q Consensus       140 ~~-~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~  218 (287)
                      +. .. +++++||+++|||+....+.+.++..+..+.  .+++ ++..+++++++|+|++++.+++++.  +++||++++
T Consensus       175 ~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~--g~~~~v~~~  248 (333)
T 2q1w_A          175 EYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG--HGAYHFSSG  248 (333)
T ss_dssp             HHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC--CEEEECSCS
T ss_pred             HhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC--CCEEEeCCC
Confidence            87 66 9999999999999843456677777776665  3445 5678999999999999999998765  789999999


Q ss_pred             cccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          219 KYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       219 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +.+|+.|+++.+.+.+|.+  .+...+... ..     .........+|+ +|++++ ||+|++++++
T Consensus       249 ~~~s~~e~~~~i~~~~g~~--~~~~~~~~~-~~-----~~~~~~~~~~d~-~k~~~~-G~~p~~~~~~  306 (333)
T 2q1w_A          249 TDVAIKELYDAVVEAMALP--SYPEPEIRE-LG-----PDDAPSILLDPS-RTIQDF-GKIEFTPLKE  306 (333)
T ss_dssp             CCEEHHHHHHHHHHHTTCS--SCCCCEEEE-CC-----TTSCCCCCBCCH-HHHHHH-CCCCCCCHHH
T ss_pred             CCccHHHHHHHHHHHhCCC--CceeCCCCC-cc-----cccccccccCCH-HHHHhc-CCCcCCCHHH
Confidence            9999999999999999976  222222111 00     001124566888 999998 9999998875

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-36  Score=259.47  Aligned_cols=282  Identities=16%  Similarity=0.132  Sum_probs=207.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccc-ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||+||||++|+++|+++|++|++++|+..... ..+..+..........+++++.+|+.|.+++.++++..++|+|||+
T Consensus        30 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~  109 (375)
T 1t2a_A           30 TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNL  109 (375)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCCEEEEC
Confidence            799999999999999999999999999865411 1111000000000124788999999999999999985457999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CC---ccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHH
Q 023110           80 NGRE----------------ADEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        80 a~~~----------------~~~~~~ll~~~~--~~---~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (287)
                      |+..                +.++.++++++.  ++   ++|||+||..+|+.....+++|+++..|.+.| .+|..+|.
T Consensus       110 A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  189 (375)
T 1t2a_A          110 GAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYW  189 (375)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             CCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHHH
Confidence            9863                234677888876  55   79999999999998766788999888887777 99999998


Q ss_pred             Hhhh----CCCcEEEEecCeeecCCCCCChh----HHHHHHHHcCCC-ccCCCCCCceeeeeeHHHHHHHHHHHHcCCcc
Q 023110          138 VLES----KGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       138 ~~~~----~~~~~~ilR~~~v~g~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (287)
                      +++.    .+++++++|++++|||+....+.    ..++..+..+.. ...++++++.++++|++|+|++++.+++++. 
T Consensus       190 ~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-  268 (375)
T 1t2a_A          190 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE-  268 (375)
T ss_dssp             HHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS-
T ss_pred             HHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC-
Confidence            8753    48999999999999997543332    334455555643 3345788899999999999999999998765 


Q ss_pred             CCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEe--CCcccc---------ccCCCcccccccccccccchhhhhhcCC
Q 023110          209 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVH--YNPKEF---------DFGKKKAFPFRDQLRRQSMCSDGNLSLT  277 (287)
Q Consensus       209 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~--~~~~~~---------~~~~~~~~~~~~~~~~~~~~~k~~~~lg  277 (287)
                       +++||+++++.+|+.|+++.+++.+|.+. .+..  +|...+         .+......+.......+|+ +|++++||
T Consensus       269 -~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~k~~~~lG  345 (375)
T 1t2a_A          269 -PEDFVIATGEVHSVREFVEKSFLHIGKTI-VWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC-TKAKQKLN  345 (375)
T ss_dssp             -CCCEEECCSCCEEHHHHHHHHHHHTTCCE-EEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCC-HHHHHHHC
T ss_pred             -CceEEEeCCCcccHHHHHHHHHHHhCCCc-ccccccccccccccccccceeecCcccCCcccchhhcCCH-HHHHHhcC
Confidence             37999999999999999999999999764 2221  111110         0111111122234456788 99999999


Q ss_pred             Ccccccccc
Q 023110          278 WWKVLQTHT  286 (287)
Q Consensus       278 ~~p~~~~~~  286 (287)
                      |+|++++++
T Consensus       346 ~~p~~~l~e  354 (375)
T 1t2a_A          346 WKPRVAFDE  354 (375)
T ss_dssp             CCCCSCHHH
T ss_pred             CCccCCHHH
Confidence            999998876

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=6.7e-37  Score=257.16  Aligned_cols=248  Identities=21%  Similarity=0.309  Sum_probs=200.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|+.                         .+|+.|.+++.++++..++|+|||+|
T Consensus         9 tGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------------~~D~~d~~~~~~~~~~~~~d~vih~a   63 (321)
T 1e6u_A            9 AGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDSRAVHDFFASERIDQVYLAA   63 (321)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------------cCCccCHHHHHHHHHhcCCCEEEEcC
Confidence            79999999999999999999999987752                         16889999999998766799999999


Q ss_pred             CCCc-----------------ccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCC----CCCCC-cch-hhhHHH
Q 023110           81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPK-SRH-KGKLNT  135 (287)
Q Consensus        81 ~~~~-----------------~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~----~~~~~-~~~-~~k~~~  135 (287)
                      +...                 .++.++++++.  ++++|||+||..+|+.....+++|++    +..|. +.| .+|..+
T Consensus        64 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  143 (321)
T 1e6u_A           64 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG  143 (321)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred             eecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHH
Confidence            8642                 34678888876  78899999999999987667888886    55554 345 999999


Q ss_pred             HHHhhh----CCCcEEEEecCeeecCCCC-----CChhHHHHHHHHc----C-CCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          136 ESVLES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKA----G-RPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       136 E~~~~~----~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      |.+++.    .+++++++||+.+|||+..     ..++..++..+..    + .++.+++++++.++++|++|+|++++.
T Consensus       144 E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~  223 (321)
T 1e6u_A          144 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIH  223 (321)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHH
Confidence            998854    5899999999999999753     2456667766654    3 566667888899999999999999999


Q ss_pred             HHcCCccC--------CceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhh
Q 023110          202 VLGNEKAS--------RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGN  273 (287)
Q Consensus       202 ~~~~~~~~--------~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~  273 (287)
                      +++++...        +++||+++++.+|+.|+++.+.+.+|.+. .+...+..          +.......+|+ +|++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~----------~~~~~~~~~d~-~k~~  291 (321)
T 1e6u_A          224 VMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG-RVVFDASK----------PDGTPRKLLDV-TRLH  291 (321)
T ss_dssp             HHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCS-EEEEETTS----------CCCCSBCCBCC-HHHH
T ss_pred             HHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCC-ceEeCCCC----------CCCcccccCCH-HHHH
Confidence            99876542        57999999999999999999999999875 44433321          11224556888 9999


Q ss_pred             hcCCCcccccccc
Q 023110          274 LSLTWWKVLQTHT  286 (287)
Q Consensus       274 ~~lg~~p~~~~~~  286 (287)
                      + |||+|++++++
T Consensus       292 ~-lG~~p~~~~~~  303 (321)
T 1e6u_A          292 Q-LGWYHEISLEA  303 (321)
T ss_dssp             H-TTCCCCCCHHH
T ss_pred             h-cCCccCCcHHH
Confidence            9 99999998875

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=7.2e-37  Score=255.69  Aligned_cols=261  Identities=15%  Similarity=0.160  Sum_probs=187.1

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC---CccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~---~~d~v   76 (287)
                      ||||||||++|+++|+++| ++|++++|+.....  .     ..    ..++. +.+|+.|.+.+..+++..   ++|+|
T Consensus         5 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~-----~~----~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~v   72 (310)
T 1eq2_A            5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--F-----VN----LVDLN-IADYMDKEDFLIQIMAGEEFGDVEAI   72 (310)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--G-----HH----HHTSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             EcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--h-----hh----cCcce-eccccccHHHHHHHHhccccCCCcEE
Confidence            7999999999999999999 99999999865421  0     00    11233 778999999999988721   49999


Q ss_pred             EecCCCC--------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHh
Q 023110           77 YDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        77 i~~a~~~--------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (287)
                      ||+|+..              +.++.++++++.  ++ +|||+||..+|+.....+++|+++..|.+.| .+|..+|.++
T Consensus        73 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  151 (310)
T 1eq2_A           73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV  151 (310)
T ss_dssp             EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred             EECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            9999863              334788999887  77 9999999999998776678898888887777 9999999987


Q ss_pred             h----hCCCcEEEEecCeeecCCCC-----CChhHHHHHHHHcCCCccCCCCCCc-eeeeeeHHHHHHHHHHHHcCCccC
Q 023110          140 E----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       140 ~----~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~~~~~~~~~~~~  209 (287)
                      +    +.+++++++||+.+|||+..     ..+...++..+..++++.+++++.+ .++++|++|+|++++.+++++.  
T Consensus       152 ~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~--  229 (310)
T 1eq2_A          152 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--  229 (310)
T ss_dssp             HHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--
T ss_pred             HHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC--
Confidence            4    34799999999999999753     3566777888888887777788888 8999999999999999998765  


Q ss_pred             CceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCC-cccccccc
Q 023110          210 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTW-WKVLQTHT  286 (287)
Q Consensus       210 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~-~p~~~~~~  286 (287)
                      +++||+++++.+|+.|+++.+.+.+|.+.....+.+....        .........++ +|+++ ||| .|..++++
T Consensus       230 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~~~-~~~~~-lG~~~~~~~l~~  297 (310)
T 1eq2_A          230 SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLK--------GRYQAFTQADL-TNLRA-AGYDKPFKTVAE  297 (310)
T ss_dssp             CEEEEESCSCCBCHHHHHHHC-----------------------------CCCSCCBCC-HHHHH-TTCCCCCCCHHH
T ss_pred             CCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhhh--------cccccccccch-HHHHh-cCCCCCCCCHHH
Confidence            7899999999999999999999999976112222221100        01123345678 89976 999 78888875

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=1.4e-36  Score=254.51  Aligned_cols=255  Identities=18%  Similarity=0.136  Sum_probs=188.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|+...                 .+  ++.+|+.|++++.++++..++|+|||+|
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A   68 (315)
T 2ydy_A            8 TGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCA   68 (315)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------------------CHHHHHHHCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------------CC--eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence            7999999999999999999999999987543                 12  6789999999999998844599999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhh
Q 023110           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~  141 (287)
                      +..                +.++.++++++.  ++ +|||+||..+|+. ...+++|+++..|.+.| .+|..+|.+++.
T Consensus        69 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  146 (315)
T 2ydy_A           69 AERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLE  146 (315)
T ss_dssp             -------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence            862                445788999887  55 9999999999987 45678999888887777 999999999988


Q ss_pred             CCCcEEEEecCeeecCCCCC--ChhHHHHHHHH-cCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC---ccCCceEEe
Q 023110          142 KGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLK-AGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE---KASRQVFNI  215 (287)
Q Consensus       142 ~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~~~~i  215 (287)
                      .+.+++++||+.||||....  .+...++..+. .+..+.+.  +++.++++|++|+|++++.++++.   ...+++||+
T Consensus       147 ~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i  224 (315)
T 2ydy_A          147 NNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHW  224 (315)
T ss_dssp             HCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEEC
T ss_pred             hCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEE
Confidence            88999999999999997541  45555666666 66665443  357789999999999999998753   236789999


Q ss_pred             cCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          216 SGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       216 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      ++++.+|+.|+++.+.+.+|.+.+.+.+.+..  . .   ....+.....+|+ +|++++ ||+|.+|+++
T Consensus       225 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~--~-~---~~~~~~~~~~~d~-~k~~~~-G~~p~~~~~~  287 (315)
T 2ydy_A          225 SGNEQMTKYEMACAIADAFNLPSSHLRPITDS--P-V---LGAQRPRNAQLDC-SKLETL-GIGQRTPFRI  287 (315)
T ss_dssp             CCSCCBCHHHHHHHHHHHTTCCCTTEEEECSC--C-C---SSSCCCSBCCBCC-HHHHHT-TCCCCCCHHH
T ss_pred             cCCCcccHHHHHHHHHHHhCCChhheeccccc--c-c---cccCCCcccccch-HHHHhc-CCCCCCCHHH
Confidence            99999999999999999999876434444320  0 0   0111234566888 999997 9999999875

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=3e-36  Score=258.23  Aligned_cols=281  Identities=17%  Similarity=0.151  Sum_probs=203.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||+||||++++++|+++|++|++++|+.... ...+...... ......+++++.+|+.|.+++.++++..++|+|||+
T Consensus         7 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   85 (372)
T 1db3_A            7 TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQD-PHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNL   85 (372)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhc-cccCCCceEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            79999999999999999999999999986541 1111111000 000024788999999999999999985458999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CC---ccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHH
Q 023110           80 NGRE----------------ADEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        80 a~~~----------------~~~~~~ll~~~~--~~---~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (287)
                      |+..                +.++.++++++.  ++   ++||++||..+|+.....+++|+++..|.+.| .+|..+|.
T Consensus        86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  165 (372)
T 1db3_A           86 GAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYW  165 (372)
T ss_dssp             CCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             CcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHH
Confidence            9862                235677888876  55   79999999999998766688999888887777 99999998


Q ss_pred             Hhh----hCCCcEEEEecCeeecCCCCCCh----hHHHHHHHHcCCC-ccCCCCCCceeeeeeHHHHHHHHHHHHcCCcc
Q 023110          138 VLE----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       138 ~~~----~~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (287)
                      +++    +.+++++++|++++|||+....+    +..++..+..+.. ...++++++.++++|++|+|++++.+++++. 
T Consensus       166 ~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-  244 (372)
T 1db3_A          166 ITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ-  244 (372)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS-
T ss_pred             HHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC-
Confidence            874    35899999999999999754332    3344555566653 3345788899999999999999999998765 


Q ss_pred             CCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEe--CCcc-c------------------cccCCCccccccccccccc
Q 023110          209 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVH--YNPK-E------------------FDFGKKKAFPFRDQLRRQS  267 (287)
Q Consensus       209 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~--~~~~-~------------------~~~~~~~~~~~~~~~~~~~  267 (287)
                       +++||+++++.+|+.|+++.+.+.+|.+. .+..  .|.. .                  ..+.+....+.......+|
T Consensus       245 -~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  322 (372)
T 1db3_A          245 -PEDFVIATGVQYSVRQFVEMAAAQLGIKL-RFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGD  322 (372)
T ss_dssp             -CCCEEECCCCCEEHHHHHHHHHHTTTEEE-EEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBC
T ss_pred             -CceEEEcCCCceeHHHHHHHHHHHhCCCc-ccccccccccccccccccccccccccccceeeccccccCCCchhhhccC
Confidence             47999999999999999999999999753 2221  1110 0                  0001110112223345678


Q ss_pred             chhhhhhcCCCcccccccc
Q 023110          268 MCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       268 ~~~k~~~~lg~~p~~~~~~  286 (287)
                      + +|++++|||+|++++++
T Consensus       323 ~-~k~~~~lG~~p~~~l~e  340 (372)
T 1db3_A          323 P-TKAHEKLGWKPEITLRE  340 (372)
T ss_dssp             C-HHHHHHHCCCCCSCHHH
T ss_pred             H-HHHHHHhCCccccCHHH
Confidence            8 99999999999999876

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=1e-35  Score=253.57  Aligned_cols=260  Identities=15%  Similarity=0.165  Sum_probs=206.4

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC---CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~---~~d~   75 (287)
                      ||||||||++|+++|+++| ++|++++|+.... ...+            .++. +.+|+.|.+.+..+++..   ++|+
T Consensus        52 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~------------~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~  118 (357)
T 2x6t_A           52 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL------------VDLN-IADYMDKEDFLIQIMAGEEFGDVEA  118 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGT------------TTSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcc------------cCce-EeeecCcHHHHHHHHhhcccCCCCE
Confidence            7999999999999999999 9999999986542 1111            1233 778999999999888731   5999


Q ss_pred             EEecCCCC--------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHH
Q 023110           76 VYDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (287)
Q Consensus        76 vi~~a~~~--------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~  138 (287)
                      |||+|+..              +.++.++++++.  ++ +|||+||..+|+.....+++|+++..|.+.| .+|..+|.+
T Consensus       119 Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  197 (357)
T 2x6t_A          119 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEY  197 (357)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred             EEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHH
Confidence            99999863              345788999887  77 9999999999998776688999888887777 999999988


Q ss_pred             hh----hCCCcEEEEecCeeecCCCC-----CChhHHHHHHHHcCCCccCCCCCCc-eeeeeeHHHHHHHHHHHHcCCcc
Q 023110          139 LE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       139 ~~----~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~~~~~~~~~~~  208 (287)
                      ++    +.+++++++||+.+|||+..     ..++..++..+..+..+.+++++.+ .++++|++|+|++++.+++++. 
T Consensus       198 ~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-  276 (357)
T 2x6t_A          198 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-  276 (357)
T ss_dssp             HHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC-
Confidence            74    34799999999999999753     2456677778888887766778888 8999999999999999998765 


Q ss_pred             CCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCC-cccccccc
Q 023110          209 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTW-WKVLQTHT  286 (287)
Q Consensus       209 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~-~p~~~~~~  286 (287)
                       +++||+++++.+|+.|+++.+.+.+|.+.....+.+....        .........++ +|+++ ||| .|..++++
T Consensus       277 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~~~-~k~~~-lG~~~~~~~l~e  344 (357)
T 2x6t_A          277 -SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLK--------GRYQAFTQADL-TNLRA-AGYDKPFKTVAE  344 (357)
T ss_dssp             -CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGGT--------TSCCSBCCCCC-HHHHH-TTCCCCCCCHHH
T ss_pred             -CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCcccc--------cccccccccCH-HHHHH-cCCCCCCCCHHH
Confidence             7899999999999999999999999986223333332110        01123445678 89986 999 78888876

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=8.2e-36  Score=256.33  Aligned_cols=274  Identities=16%  Similarity=0.143  Sum_probs=204.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccc-ccCCCCChhhhhhhcC-CeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~-~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+||||++|+++|+++|++|++++|+..... ..+..... ....... +++++.+|+.|.+++.++++..++|+|||
T Consensus        34 tGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih  112 (381)
T 1n7h_A           34 TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYI-DPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYN  112 (381)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhh-ccccccccceEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            799999999999999999999999999875411 11111100 0000012 78899999999999999998545799999


Q ss_pred             cCCCC----------------cccHHHHHHhCC--CCc-----cEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHH
Q 023110           79 INGRE----------------ADEVEPILDALP--NLE-----QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (287)
Q Consensus        79 ~a~~~----------------~~~~~~ll~~~~--~~~-----~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (287)
                      +|+..                +.++.++++++.  +++     +|||+||..+||.... +++|+++..|.+.| .+|..
T Consensus       113 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~~~~Y~~sK~~  191 (381)
T 1n7h_A          113 LAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCA  191 (381)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCCCSHHHHHHHH
T ss_pred             CCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCCCCchHHHHHH
Confidence            99863                234678888876  444     9999999999998766 88999888887777 99999


Q ss_pred             HHHHhhh----CCCcEEEEecCeeecCCCCCCh----hHHHHHHHHcCCC-ccCCCCCCceeeeeeHHHHHHHHHHHHcC
Q 023110          135 TESVLES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       135 ~E~~~~~----~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (287)
                      +|.+++.    .+++++++|++++|||+....+    +..++..+..+.. ...++++++.++++|++|+|++++.++++
T Consensus       192 ~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~  271 (381)
T 1n7h_A          192 AHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQ  271 (381)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhC
Confidence            9988753    4899999999999999754333    2334445555643 23357778899999999999999999987


Q ss_pred             CccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCccccccc
Q 023110          206 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTH  285 (287)
Q Consensus       206 ~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~  285 (287)
                      +.  +++||+++++.+|+.|+++.+.+.+|.+.+....+....       ..+.......+|+ +|++++|||+|+++++
T Consensus       272 ~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~d~-~k~~~~lG~~p~~~l~  341 (381)
T 1n7h_A          272 EK--PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRY-------FRPAEVDNLQGDA-SKAKEVLGWKPQVGFE  341 (381)
T ss_dssp             SS--CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGG-------SCSSCCCBCCBCC-HHHHHHHCCCCCSCHH
T ss_pred             CC--CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCccc-------CCccccccccCCH-HHHHHhcCCcccCCHH
Confidence            65  479999999999999999999999997531111111110       1111224456788 9999999999999887


Q ss_pred             c
Q 023110          286 T  286 (287)
Q Consensus       286 ~  286 (287)
                      +
T Consensus       342 e  342 (381)
T 1n7h_A          342 K  342 (381)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=1.5e-35  Score=251.33  Aligned_cols=275  Identities=19%  Similarity=0.183  Sum_probs=206.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh--cCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|+++|+++|++|++++|+......       ..+...  ..+++++.+|+.|.+++.++++..++|+|||
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            9 TGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS-------WRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT-------HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCCccccc-------ccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            7999999999999999999999999998754210       001100  2468899999999999999998545799999


Q ss_pred             cCCCC----------------cccHHHHHHhCC--CC-ccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHH
Q 023110           79 INGRE----------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (287)
Q Consensus        79 ~a~~~----------------~~~~~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~  138 (287)
                      +|+..                +.++.++++++.  ++ ++|||+||..+||.....+++|+.+..|.+.| .+|..+|.+
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  161 (345)
T 2z1m_A           82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWI  161 (345)
T ss_dssp             CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHH
Confidence            99863                234778888876  65 89999999999998777788898888887777 999999988


Q ss_pred             hhh----CCCcEEEEecCeeecCCCCCChh----HHHHHHHHcCCC-ccCCCCCCceeeeeeHHHHHHHHHHHHcCCccC
Q 023110          139 LES----KGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       139 ~~~----~~~~~~ilR~~~v~g~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (287)
                      ++.    .+++++++|+.++|||+......    ..++..+..+.. ....+++.+.++++|++|+|++++.+++++.  
T Consensus       162 ~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--  239 (345)
T 2z1m_A          162 TVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE--  239 (345)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS--
T ss_pred             HHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC--
Confidence            743    48999999999999997533222    223444455543 2244677788999999999999999998765  


Q ss_pred             CceEEecCCcccCHHHHHHHHHHHhCCCCCeEEe--CCcccc---------ccCCCcccccccccccccchhhhhhcCCC
Q 023110          210 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVH--YNPKEF---------DFGKKKAFPFRDQLRRQSMCSDGNLSLTW  278 (287)
Q Consensus       210 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~--~~~~~~---------~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  278 (287)
                      ++.||+++++.+|+.|+++.+.+.+|.+. .+..  +|....         .+......+.......+|+ +|++++|||
T Consensus       240 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~k~~~~lG~  317 (345)
T 2z1m_A          240 PDDYVIATGETHTVREFVEKAAKIAGFDI-EWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNP-EKAMKKLGW  317 (345)
T ss_dssp             CCCEEECCSCCEEHHHHHHHHHHHTTCCE-EEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCC-HHHHHHHCC
T ss_pred             CceEEEeCCCCccHHHHHHHHHHHhCCCc-cccccccccccccccccccccccCcccCCCCCcceeecCH-HHHHHHcCC
Confidence            37999999999999999999999999864 2221  111110         0111111122223455788 999999999


Q ss_pred             cccccccc
Q 023110          279 WKVLQTHT  286 (287)
Q Consensus       279 ~p~~~~~~  286 (287)
                      +|++++++
T Consensus       318 ~p~~~~~~  325 (345)
T 2z1m_A          318 KPRTTFDE  325 (345)
T ss_dssp             CCCSCHHH
T ss_pred             cccCCHHH
Confidence            99998875

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=2.1e-35  Score=247.61  Aligned_cols=259  Identities=14%  Similarity=0.059  Sum_probs=198.3

Q ss_pred             CCcccchHHHHHHHHHHc--CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+||||++|+++|+++  |++|++++|+....                .+++++.+|+.|++++.++++..++|+|||
T Consensus         5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   68 (317)
T 3ajr_A            5 TGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT----------------GGIKFITLDVSNRDEIDRAVEKYSIDAIFH   68 (317)
T ss_dssp             ESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC----------------TTCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             EcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc----------------cCceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence            799999999999999998  89999999976541                246789999999999999998668999999


Q ss_pred             cCCCC---------------cccHHHHHHhCC--CCccEEEEecceeeccC-CCCCCCCCCCCCCCcch-hhhHHHHHHh
Q 023110           79 INGRE---------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        79 ~a~~~---------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (287)
                      +|+..               +.++.++++++.  ++++|||+||..+|+.. ...+.+|+.+..|.+.| .+|..+|.++
T Consensus        69 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  148 (317)
T 3ajr_A           69 LAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLG  148 (317)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHH
Confidence            99863               234678888876  78899999999999864 33467787777787777 9999999877


Q ss_pred             h----hCCCcEEEEecCeeecCCCC-----CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCcc--
Q 023110          140 E----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA--  208 (287)
Q Consensus       140 ~----~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--  208 (287)
                      +    +.+++++++||+.+||+...     .......+.....+..+..++++++.++++|++|+|++++.+++++..  
T Consensus       149 ~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~  228 (317)
T 3ajr_A          149 QYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKL  228 (317)
T ss_dssp             HHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGC
T ss_pred             HHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccc
Confidence            4    45899999999999997421     122222333334445555566778899999999999999999987643  


Q ss_pred             -CCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          209 -SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       209 -~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                       .+++||+++ ..+|+.|+++.+.+.+|..  .+...+.....       ........+|+ +|++++|||+|++++++
T Consensus       229 ~~g~~~~i~~-~~~s~~e~~~~i~~~~~~~--~i~~~~~~~~~-------~~~~~~~~~d~-~k~~~~lG~~p~~~~~~  296 (317)
T 3ajr_A          229 VLRNGYNVTA-YTFTPSELYSKIKERIPEF--EIEYKEDFRDK-------IAATWPESLDS-SEASNEWGFSIEYDLDR  296 (317)
T ss_dssp             SSCSCEECCS-EEECHHHHHHHHHTTCCSC--CEEECCCHHHH-------HHTTSCSCBCC-HHHHHHHCCCCCCCHHH
T ss_pred             ccCceEecCC-ccccHHHHHHHHHHHCCcc--ccccccccchh-------hccccccccCH-HHHHHHcCCCCCCCHHH
Confidence             357999997 6799999999999998832  33332211000       00112345788 99999999999998875

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=3.9e-35  Score=268.28  Aligned_cols=271  Identities=19%  Similarity=0.229  Sum_probs=207.9

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHH-HHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~-~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|+++|+++ |++|++++|+.........          ..+++++.+|+.|.++ +..+++  ++|+|||
T Consensus       321 TGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~v~~Dl~d~~~~~~~~~~--~~D~Vih  388 (660)
T 1z7e_A          321 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP  388 (660)
T ss_dssp             ETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT----------CTTEEEEECCTTTCHHHHHHHHH--HCSEEEE
T ss_pred             EcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc----------CCceEEEECCCCCcHHHHHHhhc--CCCEEEE
Confidence            799999999999999998 8999999998765322221          3578999999998765 777888  8999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCC-------CCCcch-hhh
Q 023110           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGK  132 (287)
Q Consensus        79 ~a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~~~~~~-~~k  132 (287)
                      +|+..                +.++.++++++.  + ++|||+||..+|+.....+++|+++.       .|.+.| .+|
T Consensus       389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK  467 (660)
T 1z7e_A          389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK  467 (660)
T ss_dssp             CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred             CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHH
Confidence            99863                335778888876  5 99999999999998766678887642       344445 999


Q ss_pred             HHHHHHhh----hCCCcEEEEecCeeecCCCC---------CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          133 LNTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       133 ~~~E~~~~----~~~~~~~ilR~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      ..+|.+++    +.+++++++||+++|||+..         ..+...++..+..+.++.+++++++.++++|++|+|+++
T Consensus       468 ~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai  547 (660)
T 1z7e_A          468 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL  547 (660)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHH
Confidence            99998874    45899999999999999753         345667777888888877777788899999999999999


Q ss_pred             HHHHcCCc--cCCceEEecCCc-ccCHHHHHHHHHHHhCCCCCeEEeCCccc-cc-cCCC---cccccccccccccchhh
Q 023110          200 VQVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKAAGFPEPELVHYNPKE-FD-FGKK---KAFPFRDQLRRQSMCSD  271 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-~~-~~~~---~~~~~~~~~~~~~~~~k  271 (287)
                      +.+++++.  ..+++||+++++ .+|+.|+++.+.+.+|.+.+.+ .++... .. ....   ...........+|+ +|
T Consensus       548 ~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~k  625 (660)
T 1z7e_A          548 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRH-HFPPFAGFRVVESSSYYGKGYQDVEHRKPSI-RN  625 (660)
T ss_dssp             HHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGG-GSCCCCCEEEECTHHHHCTTCCCCSCCCBCC-HH
T ss_pred             HHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCccc-ccCccccccchhccccccccccchhhcccCH-HH
Confidence            99998764  357899999986 8999999999999998653221 122110 00 0000   00001123456788 99


Q ss_pred             hhhcCCCcccccccc
Q 023110          272 GNLSLTWWKVLQTHT  286 (287)
Q Consensus       272 ~~~~lg~~p~~~~~~  286 (287)
                      ++++|||+|++++++
T Consensus       626 a~~~LG~~p~~~l~e  640 (660)
T 1z7e_A          626 AHRCLDWEPKIDMQE  640 (660)
T ss_dssp             HHHHHCCCCCCCHHH
T ss_pred             HHHhcCCCccCcHHH
Confidence            999999999998876

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=4e-35  Score=243.85  Aligned_cols=251  Identities=19%  Similarity=0.226  Sum_probs=184.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++||+|++++|++..                 ..   +..|    +.....++  ++|+|||++
T Consensus         6 TGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-----------------~~---~~~~----~~~~~~l~--~~d~vihla   59 (298)
T 4b4o_A            6 GGGTGFIGTALTQLLNARGHEVTLVSRKPGP-----------------GR---ITWD----ELAASGLP--SCDAAVNLA   59 (298)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----------------TE---EEHH----HHHHHCCC--SCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-----------------Ce---eecc----hhhHhhcc--CCCEEEEec
Confidence            7999999999999999999999999998643                 11   1222    22344566  899999998


Q ss_pred             CCC--------------------cccHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHH
Q 023110           81 GRE--------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (287)
Q Consensus        81 ~~~--------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (287)
                      +.+                    +.++.++++++.    +.++||+.||..+||.....+.+|+++..+.+++ ..+...
T Consensus        60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~  139 (298)
T 4b4o_A           60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKW  139 (298)
T ss_dssp             CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHH
T ss_pred             cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHH
Confidence            753                    223666777654    4556999999999999888889999988887775 555544


Q ss_pred             HHH--hhhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceE
Q 023110          136 ESV--LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (287)
Q Consensus       136 E~~--~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (287)
                      |..  ....+++++++|++.||||+.  .....+......+.. ..++++++.++|||++|+|+++..+++++.. +++|
T Consensus       140 e~~~~~~~~~~~~~~~r~~~v~g~~~--~~~~~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~-~g~y  215 (298)
T 4b4o_A          140 EAAARLPGDSTRQVVVRSGVVLGRGG--GAMGHMLLPFRLGLG-GPIGSGHQFFPWIHIGDLAGILTHALEANHV-HGVL  215 (298)
T ss_dssp             HHHHCCSSSSSEEEEEEECEEECTTS--HHHHHHHHHHHTTCC-CCBTTSCSBCCEEEHHHHHHHHHHHHHCTTC-CEEE
T ss_pred             HHHHHhhccCCceeeeeeeeEEcCCC--CchhHHHHHHhcCCc-ceecccCceeecCcHHHHHHHHHHHHhCCCC-CCeE
Confidence            443  356789999999999999963  345555555555544 3458899999999999999999999998764 4599


Q ss_pred             EecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccc--cCCCcccccccccccccchhhhhhcCCCccccc-ccc
Q 023110          214 NISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD--FGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQ-THT  286 (287)
Q Consensus       214 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~-~~~  286 (287)
                      |+++++++|+.|+++.+++.+|++.  +.++|...++  +|.+........+ ..++ +|++ ++||+|+|| +++
T Consensus       216 n~~~~~~~t~~e~~~~ia~~lgrp~--~~pvP~~~~~~~~g~~~~~~~l~~~-rv~~-~kl~-~~Gf~f~yp~l~~  286 (298)
T 4b4o_A          216 NGVAPSSATNAEFAQTFGAALGRRA--FIPLPSAVVQAVFGRQRAIMLLEGQ-KVIP-RRTL-ATGYQYSFPELGA  286 (298)
T ss_dssp             EESCSCCCBHHHHHHHHHHHHTCCC--CCCBCHHHHHHHHCHHHHHHHHCCC-CBCC-HHHH-HTTCCCSCCSHHH
T ss_pred             EEECCCccCHHHHHHHHHHHhCcCC--cccCCHHHHHHHhcchhHHHhhCCC-EEcH-HHHH-HCCCCCCCCCHHH
Confidence            9999999999999999999999864  2344443322  2322111111112 2456 7887 589999996 543

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3.3e-34  Score=242.88  Aligned_cols=265  Identities=14%  Similarity=0.061  Sum_probs=203.4

Q ss_pred             CCcccchHHHHHHHHHHcC-------CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCc
Q 023110            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~   73 (287)
                      |||+||||++|+++|+++|       ++|++++|+...... ..          ..+++++.+|+.|++++.++++ .++
T Consensus        20 tGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-~~----------~~~~~~~~~Dl~d~~~~~~~~~-~~~   87 (342)
T 2hrz_A           20 IGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-GF----------SGAVDARAADLSAPGEAEKLVE-ARP   87 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-TC----------CSEEEEEECCTTSTTHHHHHHH-TCC
T ss_pred             ECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-cc----------CCceeEEEcCCCCHHHHHHHHh-cCC
Confidence            7999999999999999999       899999998654221 11          2578899999999999999884 289


Q ss_pred             cEEEecCCCC---------------cccHHHHHHhCC--C-----CccEEEEecceeeccCCCCCCCCCCCCCCCcch-h
Q 023110           74 DVVYDINGRE---------------ADEVEPILDALP--N-----LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        74 d~vi~~a~~~---------------~~~~~~ll~~~~--~-----~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (287)
                      |+|||+|+..               +.++.++++++.  +     +++||++||..+|+.....+++|+++..|.+.| .
T Consensus        88 d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~  167 (342)
T 2hrz_A           88 DVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGT  167 (342)
T ss_dssp             SEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHH
T ss_pred             CEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHH
Confidence            9999999864               334678888876  4     789999999999987655689999988888777 9


Q ss_pred             hhHHHHHHhhh----CCCcEEEEecCeeec-CCCC----CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          131 GKLNTESVLES----KGVNWTSLRPVYIYG-PLNY----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       131 ~k~~~E~~~~~----~~~~~~ilR~~~v~g-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      +|..+|.+++.    .+++.+++|++.+|| |+..    ..+...++.....+.+..++.+++...+++|++|+|++++.
T Consensus       168 sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~  247 (342)
T 2hrz_A          168 QKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIH  247 (342)
T ss_dssp             HHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHH
Confidence            99999988743    478999999999998 7532    23455667777778766555555677889999999999999


Q ss_pred             HHcCCcc---CCceEEecCCcccCHHHHHHHHHHHhCCCCC-eEEeCCccccccCCCcccccccccccccchhhhhhcCC
Q 023110          202 VLGNEKA---SRQVFNISGEKYVTFDGLARACAKAAGFPEP-ELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLT  277 (287)
Q Consensus       202 ~~~~~~~---~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg  277 (287)
                      +++.+..   .+++||+++ +.+|+.|+++.+.+.+|.+.+ .+...+.....      .........+|+ +|+++ ||
T Consensus       248 ~~~~~~~~~~~~~~~ni~g-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~~~d~-~k~~~-lG  318 (342)
T 2hrz_A          248 GAMIDVEKVGPRRNLSMPG-LSATVGEQIEALRKVAGEKAVALIRREPNEMIM------RMCEGWAPGFEA-KRARE-LG  318 (342)
T ss_dssp             HHHSCHHHHCSCCEEECCC-EEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHH------HHHTTSCCCBCC-HHHHH-TT
T ss_pred             HHhccccccCCccEEEcCC-CCCCHHHHHHHHHHHcCcccccceeeccCcchh------hhhcccccccCh-HHHHH-cC
Confidence            9987643   467999964 779999999999999987531 23322221100      000111224688 99998 99


Q ss_pred             Ccccccccc
Q 023110          278 WWKVLQTHT  286 (287)
Q Consensus       278 ~~p~~~~~~  286 (287)
                      |+|++++++
T Consensus       319 ~~p~~~l~e  327 (342)
T 2hrz_A          319 FTAESSFEE  327 (342)
T ss_dssp             CCCCSSHHH
T ss_pred             CCCCCCHHH
Confidence            999998875

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=1.2e-33  Score=232.10  Aligned_cols=247  Identities=18%  Similarity=0.120  Sum_probs=195.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||+||++++++|++ |++|++++|+....                .+   +.+|+.|++++.++++..++|+|||+|
T Consensus         6 tGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~----------------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a   65 (273)
T 2ggs_A            6 TGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ----------------GG---YKLDLTDFPRLEDFIIKKRPDVIINAA   65 (273)
T ss_dssp             ETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT----------------TC---EECCTTSHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChhHHHHHHHHhc-CCeEEEecCCCcCC----------------CC---ceeccCCHHHHHHHHHhcCCCEEEECC
Confidence            79999999999999995 89999999986420                12   789999999999999844599999999


Q ss_pred             CCC----------------cccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhhC
Q 023110           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~  142 (287)
                      +..                +.++.++++++. ...+||++||..+|+.... +++|+++..|.+.| .+|..+|.+++. 
T Consensus        66 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~~~~~-  143 (273)
T 2ggs_A           66 AMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKG-NYKEEDIPNPINYYGLSKLLGETFALQ-  143 (273)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSC-SBCTTSCCCCSSHHHHHHHHHHHHHCC-
T ss_pred             cccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCC-CcCCCCCCCCCCHHHHHHHHHHHHHhC-
Confidence            874                234678888876 2249999999999986544 78888888887776 999999999877 


Q ss_pred             CCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccC
Q 023110          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       143 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (287)
                       ++++++||+.+||+   ..+...++.....+..+.+.++   .++++|++|+|++++.+++++.  +++||+++ +.+|
T Consensus       144 -~~~~~iR~~~v~G~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~-~~~s  213 (273)
T 2ggs_A          144 -DDSLIIRTSGIFRN---KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK--TGIIHVAG-ERIS  213 (273)
T ss_dssp             -TTCEEEEECCCBSS---SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC--CEEEECCC-CCEE
T ss_pred             -CCeEEEeccccccc---cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc--CCeEEECC-Cccc
Confidence             88999999999984   3455556666677776655443   7899999999999999998754  45999999 9999


Q ss_pred             HHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcc-ccccccC
Q 023110          223 FDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWK-VLQTHTT  287 (287)
Q Consensus       223 ~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p-~~~~~~~  287 (287)
                      +.|+++.+.+.+|.+.+.+.+....  .     ....+.....+|+ +|++++|||+| .+++++.
T Consensus       214 ~~e~~~~~~~~~g~~~~~~~~~~~~--~-----~~~~~~~~~~~d~-~k~~~~lG~~p~~~~l~~~  271 (273)
T 2ggs_A          214 RFELALKIKEKFNLPGEVKEVDEVR--G-----WIAKRPYDSSLDS-SRARKILSTDFYTLDLDGM  271 (273)
T ss_dssp             HHHHHHHHHHHTTCCSCEEEESSCT--T-----CCSCCCSBCCBCC-HHHHHHCSSCCCSCCGGGC
T ss_pred             HHHHHHHHHHHhCCChhhccccccc--c-----cccCCCcccccCH-HHHHHHhCCCCCCcccccc
Confidence            9999999999999876443322111  0     0112235567899 99999999999 6888874

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=6.7e-34  Score=262.00  Aligned_cols=269  Identities=19%  Similarity=0.220  Sum_probs=201.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh-hcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||+||||++|+++|+++|++|++++|+........     ..+.. ...+++++.+|+.|++++.++++..++|+|||+
T Consensus        17 TGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih~   91 (699)
T 1z45_A           17 TGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSV-----ARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   91 (699)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHH-----HHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHH-----HHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999999765421110     00100 135788999999999999999986679999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCC----CCCCCCCCCCCCCcch-hhhHHHH
Q 023110           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD----LLPHCETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        80 a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~----~~~~~e~~~~~~~~~~-~~k~~~E  136 (287)
                      |+..                +.++.+++++|+  ++++||++||.++|+...    ..+++|+.+..|.+.| .+|..+|
T Consensus        92 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E  171 (699)
T 1z45_A           92 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE  171 (699)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             CcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHHHH
Confidence            9864                234677888876  789999999999998542    2467888777777766 9999999


Q ss_pred             HHhhh------CCCcEEEEecCeeecCCCC-----------CChhHHHHHHHHc-CCCccCCC------CCCceeeeeeH
Q 023110          137 SVLES------KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKA-GRPIPIPG------SGIQVTQLGHV  192 (287)
Q Consensus       137 ~~~~~------~~~~~~ilR~~~v~g~~~~-----------~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i~~  192 (287)
                      .+++.      .+++++++||+++|||+..           ..+...+...... +.++.+++      ++++.++++|+
T Consensus       172 ~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v  251 (699)
T 1z45_A          172 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV  251 (699)
T ss_dssp             HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred             HHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEH
Confidence            98753      5899999999999998521           1234434333332 24565655      57889999999


Q ss_pred             HHHHHHHHHHHcCC------ccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccc
Q 023110          193 KDLARAFVQVLGNE------KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQ  266 (287)
Q Consensus       193 ~D~a~~~~~~~~~~------~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (287)
                      +|+|++++.++++.      ...+++||+++++.+|+.|+++.+++.+|.+.+ +...+..          ........+
T Consensus       252 ~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~----------~~~~~~~~~  320 (699)
T 1z45_A          252 VDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLP-YKVTGRR----------AGDVLNLTA  320 (699)
T ss_dssp             HHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCC-C-------------------CCCCCB
T ss_pred             HHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCC-ceecCCC----------CCccccccC
Confidence            99999999988642      223579999999999999999999999998653 2211110          111245568


Q ss_pred             cchhhhhhcCCCcccccccc
Q 023110          267 SMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       267 ~~~~k~~~~lg~~p~~~~~~  286 (287)
                      |+ +|++++|||+|++++++
T Consensus       321 d~-~ka~~~LG~~p~~~l~e  339 (699)
T 1z45_A          321 KP-DRAKRELKWQTELQVED  339 (699)
T ss_dssp             CC-HHHHHHTCCCCCCCHHH
T ss_pred             CH-HHHHHhcCCCCCCCHHH
Confidence            88 99999999999999876

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=6.6e-34  Score=242.94  Aligned_cols=269  Identities=19%  Similarity=0.192  Sum_probs=196.9

Q ss_pred             CCcccchHHHHHHHHHHcC-----CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCC-cc
Q 023110            1 MGGTRFIGVFLSRLLVKEG-----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG-FD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~-~d   74 (287)
                      ||||||||++|+++|+++|     ++|++++|+.....  +.          ..+++++.+|+.|.+++.++++..+ +|
T Consensus         7 tGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~----------~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   74 (364)
T 2v6g_A            7 VGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HE----------DNPINYVQCDISDPDDSQAKLSPLTDVT   74 (364)
T ss_dssp             ETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CC----------SSCCEEEECCTTSHHHHHHHHTTCTTCC
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cc----------cCceEEEEeecCCHHHHHHHHhcCCCCC
Confidence            7999999999999999999     99999999876522  11          2578999999999999999998333 99


Q ss_pred             EEEecCCCC-----------cccHHHHHHhCC----CCccEE-------EEecceeeccC--CCCCCCCCCCCCC-Ccch
Q 023110           75 VVYDINGRE-----------ADEVEPILDALP----NLEQFI-------YCSSAGVYLKS--DLLPHCETDTVDP-KSRH  129 (287)
Q Consensus        75 ~vi~~a~~~-----------~~~~~~ll~~~~----~~~~~i-------~~Ss~~v~~~~--~~~~~~e~~~~~~-~~~~  129 (287)
                      +|||+|+..           +.++.++++++.    ++++||       |+||..+||..  ...+++|+++..| .+.|
T Consensus        75 ~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y  154 (364)
T 2v6g_A           75 HVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY  154 (364)
T ss_dssp             EEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHH
T ss_pred             EEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhh
Confidence            999999863           446888999876    478887       89999999875  3457888876654 3334


Q ss_pred             hhhHHHHHHh----hhCC-CcEEEEecCeeecCCCCC--C-hhHH-HHHHH--HcCCCccCCCCCC---ceeeeeeHHHH
Q 023110          130 KGKLNTESVL----ESKG-VNWTSLRPVYIYGPLNYN--P-VEEW-FFHRL--KAGRPIPIPGSGI---QVTQLGHVKDL  195 (287)
Q Consensus       130 ~~k~~~E~~~----~~~~-~~~~ilR~~~v~g~~~~~--~-~~~~-~~~~~--~~~~~~~~~~~~~---~~~~~i~~~D~  195 (287)
                         ..+|.++    +..+ ++++++||+.+|||+...  . +... ++..+  ..+.++.++++++   ..++++|++|+
T Consensus       155 ---~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dv  231 (364)
T 2v6g_A          155 ---YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLI  231 (364)
T ss_dssp             ---HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHH
T ss_pred             ---HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHH
Confidence               3355554    3455 999999999999997542  2 2222 23444  3577777677763   45788999999


Q ss_pred             HHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeE-EeCCccccc---------------cCCCcc--c
Q 023110          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPEL-VHYNPKEFD---------------FGKKKA--F  257 (287)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~---------------~~~~~~--~  257 (287)
                      |++++.+++++...+++||+++++.+|+.|+++.+++.+|.+.+.+ ...|.....               .+....  .
T Consensus       232 a~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (364)
T 2v6g_A          232 AEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTPTKLK  311 (364)
T ss_dssp             HHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCCCCHH
T ss_pred             HHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCccccc
Confidence            9999999988765678999999999999999999999999865322 123322110               010000  0


Q ss_pred             cc---------cccc-ccccchhhhhhcCCCcccccccc
Q 023110          258 PF---------RDQL-RRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       258 ~~---------~~~~-~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      ..         .... ..+|+ +|+++ |||+|.+++++
T Consensus       312 ~~~~~~~~~~~~~~~~~~~d~-~k~~~-lG~~p~~~~~e  348 (364)
T 2v6g_A          312 DVGIWWFGDVILGNECFLDSM-NKSKE-HGFLGFRNSKN  348 (364)
T ss_dssp             HHCCHHHHHHHHTSCCCCBCC-HHHHH-TTCCCCCCHHH
T ss_pred             cccccchhhhccccchhhcch-HHHHh-cCCCCCCCHHH
Confidence            00         0133 46888 99987 99999998876

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=6.5e-34  Score=235.27  Aligned_cols=250  Identities=17%  Similarity=0.166  Sum_probs=190.7

Q ss_pred             CCcccchHHHHHHHHHHc--CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||+|++++++|+++  |++|++++|+..... .+.          ..+++++.+|+.|++++.++++  ++|+|||
T Consensus         6 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~l~----------~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~   72 (287)
T 2jl1_A            6 TGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS-TLA----------DQGVEVRHGDYNQPESLQKAFA--GVSKLLF   72 (287)
T ss_dssp             TTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH-HHH----------HTTCEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             EcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh-HHh----------hcCCeEEEeccCCHHHHHHHHh--cCCEEEE
Confidence            799999999999999999  999999999865421 110          2478899999999999999998  8999999


Q ss_pred             cCCC------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCCCcEEEEe
Q 023110           79 INGR------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLR  150 (287)
Q Consensus        79 ~a~~------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~ilR  150 (287)
                      +++.      ++.++.+++++++  ++++|||+||..+|.             .|..|..+|..+|.++++.+++++++|
T Consensus        73 ~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~~~y~~~K~~~E~~~~~~~~~~~ilr  139 (287)
T 2jl1_A           73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE-------------SIIPLAHVHLATEYAIRTTNIPYTFLR  139 (287)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG-------------CCSTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             cCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------CCCchHHHHHHHHHHHHHcCCCeEEEE
Confidence            9986      4567888999987  788999999988752             122355999999999999999999999


Q ss_pred             cCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccCHHHHHHHH
Q 023110          151 PVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC  230 (287)
Q Consensus       151 ~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i  230 (287)
                      |+.++|+.. ..+   +...+..+.. . ...+++.++++|++|+|++++.+++++...+++||+++++.+|+.|+++.+
T Consensus       140 p~~~~~~~~-~~~---~~~~~~~~~~-~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i  213 (287)
T 2jl1_A          140 NALYTDFFV-NEG---LRASTESGAI-V-TNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQIL  213 (287)
T ss_dssp             ECCBHHHHS-SGG---GHHHHHHTEE-E-ESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHH
T ss_pred             CCEeccccc-hhh---HHHHhhCCce-e-ccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHH
Confidence            998888631 111   2222223332 2 234567889999999999999999876556789999999999999999999


Q ss_pred             HHHhCCCCCeEEeCCcccccc-----CCCccc---------ccccccccccchhhhhhcCCCcccccccc
Q 023110          231 AKAAGFPEPELVHYNPKEFDF-----GKKKAF---------PFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       231 ~~~~g~~~~~~~~~~~~~~~~-----~~~~~~---------~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      .+.+|.+. .+.+.+...+..     +.+...         .........++ +|++++||  |.+++++
T Consensus       214 ~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lG--~~~~l~e  279 (287)
T 2jl1_A          214 SEVSGKKV-VHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTS-DDLQKLIG--SLTPLKE  279 (287)
T ss_dssp             HHHHSSCC-EEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCC-SHHHHHHS--SCCCHHH
T ss_pred             HHHHCCcc-eEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCc-hHHHHHhC--CCCCHHH
Confidence            99999876 666666543210     111000         00112345677 89999999  8888875

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=4.5e-33  Score=247.70  Aligned_cols=254  Identities=14%  Similarity=0.088  Sum_probs=179.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|+....                .   .+.+|+.+.  +..+++  ++|+|||+|
T Consensus       153 TGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~---~v~~d~~~~--~~~~l~--~~D~Vih~A  209 (516)
T 3oh8_A          153 TGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------G---KRFWDPLNP--ASDLLD--GADVLVHLA  209 (516)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------T---CEECCTTSC--CTTTTT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------c---ceeecccch--hHHhcC--CCCEEEECC
Confidence            79999999999999999999999999997652                1   156677643  355666  899999999


Q ss_pred             CCC-----------------cccHHHHHHh-CC--CCccEEEEecceeec-cCCCCCCCCCCCCCCCcch-hhhHHHHHH
Q 023110           81 GRE-----------------ADEVEPILDA-LP--NLEQFIYCSSAGVYL-KSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (287)
Q Consensus        81 ~~~-----------------~~~~~~ll~~-~~--~~~~~i~~Ss~~v~~-~~~~~~~~e~~~~~~~~~~-~~k~~~E~~  138 (287)
                      +..                 +.++.+++++ ++  ++++|||+||.++|| .....+++|+.+. +.++| ..|...|.+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~~E~~  288 (516)
T 3oh8_A          210 GEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRDWEHA  288 (516)
T ss_dssp             CC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHHHHHT
T ss_pred             CCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHHHHHH
Confidence            863                 3457889998 43  788999999999998 4545577888776 55555 777777765


Q ss_pred             h---hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEe
Q 023110          139 L---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI  215 (287)
Q Consensus       139 ~---~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i  215 (287)
                      +   +..+++++++||+++|||+.  .+...++..+..+.. ..++++++.++++|++|+|++++.+++++. .++.||+
T Consensus       289 ~~~~~~~gi~~~ilRp~~v~Gp~~--~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~-~~g~~ni  364 (516)
T 3oh8_A          289 TAPASDAGKRVAFIRTGVALSGRG--GMLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ-ISGPINA  364 (516)
T ss_dssp             THHHHHTTCEEEEEEECEEEBTTB--SHHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTT-CCEEEEE
T ss_pred             HHHHHhCCCCEEEEEeeEEECCCC--ChHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCcc-cCCcEEE
Confidence            4   46799999999999999963  455555555444443 355788899999999999999999998876 4569999


Q ss_pred             cCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccc--cCCCcccccccccccccchhhhhhcCCCccccc-ccc
Q 023110          216 SGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD--FGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQ-THT  286 (287)
Q Consensus       216 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~-~~~  286 (287)
                      ++++.+|+.|+++.+++.+|.+.  ..++|.....  ++..............++ +|++ +|||+|++| +++
T Consensus       365 ~~~~~~s~~el~~~i~~~~g~~~--~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~-~kl~-~lG~~~~~~~l~e  434 (516)
T 3oh8_A          365 VAPNPVSNADMTKILATSMHRPA--FIQIPSLGPKILLGSQGAEELALASQRTAP-AALE-NLSHTFRYTDIGA  434 (516)
T ss_dssp             SCSCCEEHHHHHHHTTC-----------------------CCGGGGGGCEEEECC-HHHH-HTTCCCSCSSHHH
T ss_pred             ECCCCCCHHHHHHHHHHHhCCCC--CCCCCHHHHHHHhCCchhHHHhhcCCeech-HHHH-HCCCCCCCCCHHH
Confidence            99999999999999999999764  2333333221  122100111112334566 7888 589999998 654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=100.00  E-value=3.4e-33  Score=230.78  Aligned_cols=250  Identities=17%  Similarity=0.161  Sum_probs=188.0

Q ss_pred             CCcccchHHHHHHHHHHc--CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||||++|++++++|+++  |++|++++|++.... .+.          ..+++++.+|+.|++++.++++  ++|+|||
T Consensus         5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~----------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   71 (286)
T 2zcu_A            5 TGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ-ALA----------AQGITVRQADYGDEAALTSALQ--GVEKLLL   71 (286)
T ss_dssp             ESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH-HHH----------HTTCEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             EcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh-hhh----------cCCCeEEEcCCCCHHHHHHHHh--CCCEEEE
Confidence            799999999999999998  999999999865421 110          2478899999999999999998  8999999


Q ss_pred             cCCC----CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCCCcEEEEecC
Q 023110           79 INGR----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPV  152 (287)
Q Consensus        79 ~a~~----~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~ilR~~  152 (287)
                      +++.    ++.++.++++++.  ++++||++||..+|.             .|..|..+|..+|.++++.+++++++||+
T Consensus        72 ~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~~~y~~sK~~~e~~~~~~~~~~~ilrp~  138 (286)
T 2zcu_A           72 ISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADT-------------SPLGLADEHIETEKMLADSGIVYTLLRNG  138 (286)
T ss_dssp             CC--------CHHHHHHHHHHHHTCCEEEEEEETTTTT-------------CCSTTHHHHHHHHHHHHHHCSEEEEEEEC
T ss_pred             eCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------CcchhHHHHHHHHHHHHHcCCCeEEEeCh
Confidence            9985    3567899999987  889999999988761             12335599999999998889999999998


Q ss_pred             eeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHHH
Q 023110          153 YIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAK  232 (287)
Q Consensus       153 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~  232 (287)
                      .++++.     .. ++.....+..+. .+.+++.++++|++|+|++++.++.++...++.||+++++.+|+.|+++.+.+
T Consensus       139 ~~~~~~-----~~-~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~  211 (286)
T 2zcu_A          139 WYSENY-----LA-SAPAALEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTK  211 (286)
T ss_dssp             CBHHHH-----HT-THHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHH
T ss_pred             HHhhhh-----HH-HhHHhhcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHH
Confidence            766642     11 122222333343 34567889999999999999999988655688999999989999999999999


Q ss_pred             HhCCCCCeEEeCCcccccc-----CCCcc---------cccccccccccchhhhhhcCCCcccccccc
Q 023110          233 AAGFPEPELVHYNPKEFDF-----GKKKA---------FPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       233 ~~g~~~~~~~~~~~~~~~~-----~~~~~---------~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      .+|.+. .+.+.+...+..     +....         ..........++ ++++++||| |..++++
T Consensus       212 ~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lg~-~~~~~~e  276 (286)
T 2zcu_A          212 QSGKQV-TYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDS-KTLSKLIGH-PTTTLAE  276 (286)
T ss_dssp             HHSSCC-EEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCC-CHHHHHHTS-CCCCHHH
T ss_pred             HHCCCC-ceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCc-hHHHHHhCc-CCCCHHH
Confidence            999876 666666543321     11100         000112344677 899999997 5667765

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=4.7e-33  Score=235.64  Aligned_cols=263  Identities=13%  Similarity=0.050  Sum_probs=192.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh-hcCCeEEE-EecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHL-KGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~i-~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+||||++|+++|+++|++|++++|+..... .+.    ..+.. ...+++++ .+|+.|.+.+.++++  ++|+|||
T Consensus        17 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~----~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih   89 (342)
T 1y1p_A           17 TGANGFVASHVVEQLLEHGYKVRGTARSASKLA-NLQ----KRWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGVAH   89 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH----HHHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCcccHH-HHH----HHhhccCCCceEEEEecCCcChHHHHHHHc--CCCEEEE
Confidence            799999999999999999999999999865421 110    00000 01468888 899999999999998  8999999


Q ss_pred             cCCCC-------------cccHHHHHHhCC---CCccEEEEecceeeccCC----CCCCCCCCC----------------
Q 023110           79 INGRE-------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSD----LLPHCETDT----------------  122 (287)
Q Consensus        79 ~a~~~-------------~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~~----~~~~~e~~~----------------  122 (287)
                      +|+..             +.++.++++++.   ++++|||+||..+|+...    +.+++|++.                
T Consensus        90 ~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~  169 (342)
T 1y1p_A           90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP  169 (342)
T ss_dssp             CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTST
T ss_pred             eCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccccccc
Confidence            99863             345778898864   678999999999986432    146777752                


Q ss_pred             CCCCcch-hhhHHHHHHhhh------CCCcEEEEecCeeecCCCCC----ChhHHHHHHHHcCCCccCCCCCCceeeeee
Q 023110          123 VDPKSRH-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~~~------~~~~~~ilR~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                      ..|.+.| .+|..+|.+++.      .+++++++||+++|||....    .....++..+..+++..+.+++ +.++++|
T Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~  248 (342)
T 1y1p_A          170 QKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PPQYYVS  248 (342)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CSEEEEE
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-CcCCEeE
Confidence            2344455 999999998743      27889999999999997432    2566778888888776554544 6789999


Q ss_pred             HHHHHHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhh
Q 023110          192 VKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSD  271 (287)
Q Consensus       192 ~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  271 (287)
                      ++|+|++++.++.++...+..+ ++++..+|+.|+++.+.+.+|.+.  + +.+...          .......+|+ +|
T Consensus       249 v~Dva~a~~~~~~~~~~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~~--~-~~~~~~----------~~~~~~~~d~-~k  313 (342)
T 1y1p_A          249 AVDIGLLHLGCLVLPQIERRRV-YGTAGTFDWNTVLATFRKLYPSKT--F-PADFPD----------QGQDLSKFDT-AP  313 (342)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEE-EECCEEECHHHHHHHHHHHCTTSC--C-CCCCCC----------CCCCCCEECC-HH
T ss_pred             HHHHHHHHHHHHcCcccCCceE-EEeCCCCCHHHHHHHHHHHCCCcc--C-CCCCCc----------cccccccCCh-HH
Confidence            9999999999998765445544 455677999999999999998642  1 111000          0112355788 99


Q ss_pred             hhhcCCC---cccccccc
Q 023110          272 GNLSLTW---WKVLQTHT  286 (287)
Q Consensus       272 ~~~~lg~---~p~~~~~~  286 (287)
                      ++++|||   .+..++++
T Consensus       314 ~~~~lg~~~~~~~~~l~~  331 (342)
T 1y1p_A          314 SLEILKSLGRPGWRSIEE  331 (342)
T ss_dssp             HHHHHHHTTCCSCCCHHH
T ss_pred             HHHHHhhcccCCcCCHHH
Confidence            9999987   45566664

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.97  E-value=3.6e-31  Score=223.76  Aligned_cols=262  Identities=17%  Similarity=0.162  Sum_probs=178.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccc--ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+||||++|+++|+++|++|++++|+.....  ..+...     .....+++++.+|+.|.+++.++++  ++|+|||
T Consensus        11 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih   83 (337)
T 2c29_D           11 TGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDL-----PKAETHLTLWKADLADEGSFDEAIK--GCTGVFH   83 (337)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTS-----TTHHHHEEEEECCTTSTTTTHHHHT--TCSEEEE
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhc-----ccCCCeEEEEEcCCCCHHHHHHHHc--CCCEEEE
Confidence            899999999999999999999999999865311  000000     0001358899999999999999998  8999999


Q ss_pred             cCCCC---------------cccHHHHHHhCC--C-CccEEEEecce-eeccCC-CCCCCCCCCCC---------CCcch
Q 023110           79 INGRE---------------ADEVEPILDALP--N-LEQFIYCSSAG-VYLKSD-LLPHCETDTVD---------PKSRH  129 (287)
Q Consensus        79 ~a~~~---------------~~~~~~ll~~~~--~-~~~~i~~Ss~~-v~~~~~-~~~~~e~~~~~---------~~~~~  129 (287)
                      +|+..               +.++.++++++.  + +++|||+||.. +|+... ..+++|+....         |...|
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  163 (337)
T 2c29_D           84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMY  163 (337)
T ss_dssp             CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred             eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchH
Confidence            98752               234678888876  5 79999999987 454322 23455654221         33335


Q ss_pred             -hhhHHHHHHhh----hCCCcEEEEecCeeecCCCCCChhHHHHHH--HHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR--LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 -~~k~~~E~~~~----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                       .+|..+|.++.    ..+++++++||+++|||+....+...+...  ...+.... ++.. ....++|++|+|++++.+
T Consensus       164 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~-~~~~-~~~~~i~v~Dva~a~~~~  241 (337)
T 2c29_D          164 FVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAH-YSII-RQGQFVHLDDLCNAHIYL  241 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGG-HHHH-TEEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCcc-cccc-CCCCEEEHHHHHHHHHHH
Confidence             99999998763    468999999999999997543322222111  12333221 1111 234599999999999999


Q ss_pred             HcCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccc
Q 023110          203 LGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVL  282 (287)
Q Consensus       203 ~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  282 (287)
                      ++++.. ++.|++++ ..+|+.|+++.+.+.++...     .+..   +...   ........+|+ +|+ ++|||+|++
T Consensus       242 ~~~~~~-~~~~~~~~-~~~s~~e~~~~i~~~~~~~~-----~~~~---~~~~---~~~~~~~~~d~-~k~-~~lG~~p~~  306 (337)
T 2c29_D          242 FENPKA-EGRYICSS-HDCIILDLAKMLREKYPEYN-----IPTE---FKGV---DENLKSVCFSS-KKL-TDLGFEFKY  306 (337)
T ss_dssp             HHCTTC-CEEEEECC-EEEEHHHHHHHHHHHCTTSC-----CCSC---CTTC---CTTCCCCEECC-HHH-HHHTCCCCC
T ss_pred             hcCccc-CceEEEeC-CCCCHHHHHHHHHHHCCCcc-----CCCC---CCcc---cCCCccccccH-HHH-HHcCCCcCC
Confidence            987543 45776655 56899999999999874211     1100   0000   01124456788 999 679999999


Q ss_pred             cccc
Q 023110          283 QTHT  286 (287)
Q Consensus       283 ~~~~  286 (287)
                      ++++
T Consensus       307 ~l~e  310 (337)
T 2c29_D          307 SLED  310 (337)
T ss_dssp             CHHH
T ss_pred             CHHH
Confidence            9876

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.97  E-value=1.1e-31  Score=226.95  Aligned_cols=263  Identities=19%  Similarity=0.200  Sum_probs=177.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++|+++|+++|++|++++|+..... ....  ...+. ...+++++.+|+.|.+++.++++  ++|+|||+|
T Consensus        15 TGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~-~~~~--~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~A   88 (338)
T 2rh8_A           15 VGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQK-KVSH--LLELQ-ELGDLKIFRADLTDELSFEAPIA--GCDFVFHVA   88 (338)
T ss_dssp             ECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTT-TTHH--HHHHG-GGSCEEEEECCTTTSSSSHHHHT--TCSEEEEES
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEEcCcchhh-hHHH--HHhcC-CCCcEEEEecCCCChHHHHHHHc--CCCEEEEeC
Confidence            799999999999999999999999999765311 0000  00011 12468899999999999999998  899999998


Q ss_pred             CCC---------------cccHHHHHHhCC--C-CccEEEEecce-eeccC-C--CCCCCCCCCC--------CC-C-cc
Q 023110           81 GRE---------------ADEVEPILDALP--N-LEQFIYCSSAG-VYLKS-D--LLPHCETDTV--------DP-K-SR  128 (287)
Q Consensus        81 ~~~---------------~~~~~~ll~~~~--~-~~~~i~~Ss~~-v~~~~-~--~~~~~e~~~~--------~~-~-~~  128 (287)
                      +..               +.++.++++++.  + +++|||+||.. +|+.. .  ..+++|+...        .| . .|
T Consensus        89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  168 (338)
T 2rh8_A           89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGY  168 (338)
T ss_dssp             SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCC
T ss_pred             CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchH
Confidence            752               234678888876  4 78999999987 44321 1  1256666522        11 1 24


Q ss_pred             hhhhHHHHHHhh----hCCCcEEEEecCeeecCCCCCChhHHH--HHHHHcCCCccCCCC------CCceeeeeeHHHHH
Q 023110          129 HKGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWF--FHRLKAGRPIPIPGS------GIQVTQLGHVKDLA  196 (287)
Q Consensus       129 ~~~k~~~E~~~~----~~~~~~~ilR~~~v~g~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~i~~~D~a  196 (287)
                      ..+|..+|.++.    ..+++++++||+++|||+........+  +.....+....+ +.      +...++++|++|+|
T Consensus       169 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~i~v~Dva  247 (338)
T 2rh8_A          169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLI-NGMKGMQMLSGSVSIAHVEDVC  247 (338)
T ss_dssp             TTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHH-HHHHHHHHHHSSEEEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccc-ccccccccccCcccEEEHHHHH
Confidence            499999998763    358999999999999997533221111  111233332211 11      11234899999999


Q ss_pred             HHHHHHHcCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcC
Q 023110          197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSL  276 (287)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l  276 (287)
                      ++++.+++++. .++.|++++ ..+|+.|+++.+.+.++...  +   +..   ++..   . ......+|+ +|+ ++|
T Consensus       248 ~a~~~~~~~~~-~~~~~~~~~-~~~s~~e~~~~l~~~~~~~~--~---~~~---~~~~---~-~~~~~~~d~-~k~-~~l  311 (338)
T 2rh8_A          248 RAHIFVAEKES-ASGRYICCA-ANTSVPELAKFLSKRYPQYK--V---PTD---FGDF---P-PKSKLIISS-EKL-VKE  311 (338)
T ss_dssp             HHHHHHHHCTT-CCEEEEECS-EEECHHHHHHHHHHHCTTSC--C---CCC---CTTS---C-SSCSCCCCC-HHH-HHH
T ss_pred             HHHHHHHcCCC-cCCcEEEec-CCCCHHHHHHHHHHhCCCCC--C---CCC---CCCC---C-cCcceeech-HHH-HHh
Confidence            99999998754 345788776 56999999999999876311  1   100   0000   0 011256788 999 569


Q ss_pred             CCcccccccc
Q 023110          277 TWWKVLQTHT  286 (287)
Q Consensus       277 g~~p~~~~~~  286 (287)
                      ||+|++++++
T Consensus       312 G~~p~~~l~~  321 (338)
T 2rh8_A          312 GFSFKYGIEE  321 (338)
T ss_dssp             TCCCSCCHHH
T ss_pred             CCCCCCCHHH
Confidence            9999999876

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.97  E-value=1.7e-30  Score=215.03  Aligned_cols=246  Identities=15%  Similarity=0.124  Sum_probs=183.3

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||||++|++++++|.+. |++|++++|++..... +.          ..+++++.+|+.|++++.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~-~~----------~~~v~~~~~D~~d~~~l~~~~~--~~d~vi~~   72 (289)
T 3e48_A            6 TGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD-DW----------RGKVSVRQLDYFNQESMVEAFK--GMDTVVFI   72 (289)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG-GG----------BTTBEEEECCTTCHHHHHHHTT--TCSEEEEC
T ss_pred             EcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH-hh----------hCCCEEEEcCCCCHHHHHHHHh--CCCEEEEe
Confidence            799999999999999998 9999999999766322 11          3689999999999999999999  99999999


Q ss_pred             CCCC------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCCCcEEEEec
Q 023110           80 NGRE------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRP  151 (287)
Q Consensus        80 a~~~------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~ilR~  151 (287)
                      ++..      +..+.+++++++  ++++|||+||.+.   ..         ..|......+..+|..+++.+++++++||
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~~---------~~~~~~~~~~~~~e~~~~~~g~~~~ilrp  140 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD---QH---------NNPFHMSPYFGYASRLLSTSGIDYTYVRM  140 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCC---ST---------TCCSTTHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCC---CC---------CCCCccchhHHHHHHHHHHcCCCEEEEec
Confidence            9864      356788999987  8899999999442   11         11222223345778888888999999999


Q ss_pred             CeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHH
Q 023110          152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (287)
Q Consensus       152 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~  231 (287)
                      +.++|+.     .. ++.....+... ..+.+++.+++++++|+|++++.++.++...+++|+++ ++.+|+.|+++.+.
T Consensus       141 ~~~~~~~-----~~-~~~~~~~~~~~-~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~~e~~~~~~  212 (289)
T 3e48_A          141 AMYMDPL-----KP-YLPELMNMHKL-IYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDMKELAAILS  212 (289)
T ss_dssp             CEESTTH-----HH-HHHHHHHHTEE-CCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEHHHHHHHHH
T ss_pred             ccccccc-----HH-HHHHHHHCCCE-ecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCHHHHHHHHH
Confidence            9999972     22 23333333333 33567889999999999999999999877668899999 99999999999999


Q ss_pred             HHhCCCCCeEEeCCccccccCCCc-c----------cccccccccccchhhhhhcCCCccc
Q 023110          232 KAAGFPEPELVHYNPKEFDFGKKK-A----------FPFRDQLRRQSMCSDGNLSLTWWKV  281 (287)
Q Consensus       232 ~~~g~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~~~~~~~~k~~~~lg~~p~  281 (287)
                      +.+|++. .+.+.+...+...... .          ...........+ ..+++.+|+.|+
T Consensus       213 ~~~g~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~G~~p~  271 (289)
T 3e48_A          213 EASGTEI-KYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQES-NDFKQLVNDQPQ  271 (289)
T ss_dssp             HHHTSCC-EECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCC-SHHHHHHSSCCC
T ss_pred             HHHCCce-eEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccC-chHHHHhCCCCC
Confidence            9999876 6666655433211000 0          001122333455 678888998875

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.97  E-value=1.1e-30  Score=219.37  Aligned_cols=264  Identities=18%  Similarity=0.206  Sum_probs=176.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEc-CCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|+++|+++|++|++++| ++.... .....  ..+.....+++++.+|+.|++++.++++  ++|+|||+
T Consensus         7 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~~--~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~   81 (322)
T 2p4h_X            7 TGGTGFLGSWIIKSLLENGYSVNTTIRADPERKR-DVSFL--TNLPGASEKLHFFNADLSNPDSFAAAIE--GCVGIFHT   81 (322)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEECCCC----C-CCHHH--HTSTTHHHHEEECCCCTTCGGGGHHHHT--TCSEEEEC
T ss_pred             ECChhHHHHHHHHHHHHCCCEEEEEEeCCccchh-HHHHH--HhhhccCCceEEEecCCCCHHHHHHHHc--CCCEEEEc
Confidence            799999999999999999999999998 543210 00000  0000001357889999999999999998  89999999


Q ss_pred             CCCC---------------cccHHHHHHhCC---CCccEEEEecceee-ccC-CCCCCCCCCCC--------CCC--cch
Q 023110           80 NGRE---------------ADEVEPILDALP---NLEQFIYCSSAGVY-LKS-DLLPHCETDTV--------DPK--SRH  129 (287)
Q Consensus        80 a~~~---------------~~~~~~ll~~~~---~~~~~i~~Ss~~v~-~~~-~~~~~~e~~~~--------~~~--~~~  129 (287)
                      |+..               +.++.++++++.   ++++|||+||..++ +.. ...+++|+...        .|.  .|.
T Consensus        82 A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~  161 (322)
T 2p4h_X           82 ASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYA  161 (322)
T ss_dssp             CCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHH
T ss_pred             CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHH
Confidence            8641               234677888875   46899999998744 332 22345665432        222  244


Q ss_pred             hhhHHHHHHhh----hCCCcEEEEecCeeecCCCCCChhHHH--HHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWF--FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       130 ~~k~~~E~~~~----~~~~~~~ilR~~~v~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      .+|..+|.++.    ..+++++++||+++|||+........+  +.....+....+ +.  ..++++|++|+|++++.++
T Consensus       162 ~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~~~  238 (322)
T 2p4h_X          162 VSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQI-GV--TRFHMVHVDDVARAHIYLL  238 (322)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGC-CE--EEEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccC-cC--CCcCEEEHHHHHHHHHHHh
Confidence            99999998763    468999999999999997533221111  112234443332 22  3458999999999999999


Q ss_pred             cCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCccccc
Q 023110          204 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQ  283 (287)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~  283 (287)
                      +++...+ .|| ++++.+|+.|+++.+.+.++..  .   .+... .+...   . ......+|+ +|+ ++|||+|+++
T Consensus       239 ~~~~~~g-~~~-~~~~~~s~~e~~~~i~~~~~~~--~---~~~~~-~~~~~---~-~~~~~~~d~-~k~-~~lG~~p~~~  304 (322)
T 2p4h_X          239 ENSVPGG-RYN-CSPFIVPIEEMSQLLSAKYPEY--Q---ILTVD-ELKEI---K-GARLPDLNT-KKL-VDAGFDFKYT  304 (322)
T ss_dssp             HSCCCCE-EEE-CCCEEEEHHHHHHHHHHHCTTS--C---CCCTT-TTTTC---C-CEECCEECC-HHH-HHTTCCCCCC
T ss_pred             hCcCCCC-CEE-EcCCCCCHHHHHHHHHHhCCCC--C---CCCCc-cccCC---C-CCcceeccc-HHH-HHhCCccCCC
Confidence            7754334 588 5668899999999999887421  1   11110 00100   0 113456788 999 5699999999


Q ss_pred             ccc
Q 023110          284 THT  286 (287)
Q Consensus       284 ~~~  286 (287)
                      +++
T Consensus       305 ~~~  307 (322)
T 2p4h_X          305 IED  307 (322)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            876

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.97  E-value=1.2e-30  Score=229.92  Aligned_cols=242  Identities=15%  Similarity=0.153  Sum_probs=180.1

Q ss_pred             CCcccchHHHHHHHHHHc---CCeEEEEEcCCcccc------ccCCCCCh----hhhhhhcCCeEEEEecCC------Ch
Q 023110            1 MGGTRFIGVFLSRLLVKE---GHQVTLFTRGKAPIA------QQLPGESD----QEFAEFSSKILHLKGDRK------DY   61 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~---g~~V~~~~r~~~~~~------~~~~~~~~----~~~~~~~~~~~~i~~D~~------d~   61 (287)
                      ||||||||++|+++|+++   |++|++++|+.....      +.+.....    ........+++++.+|+.      |.
T Consensus        79 TGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~gld~  158 (478)
T 4dqv_A           79 TGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQ  158 (478)
T ss_dssp             ECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGGCCH
T ss_pred             ECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccCCCH
Confidence            799999999999999999   899999999876421      11111000    000111368999999998      66


Q ss_pred             HHHHhhhhcCCccEEEecCCC------------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           62 DFVKSSLSAKGFDVVYDINGR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        62 ~~~~~~~~~~~~d~vi~~a~~------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      +.+..+++  ++|+|||+|+.            |+.++.+++++|.  ++++|||+||.++|+.....+++|+....|.+
T Consensus       159 ~~~~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~  236 (478)
T 4dqv_A          159 PMWRRLAE--TVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVIS  236 (478)
T ss_dssp             HHHHHHHH--HCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHC
T ss_pred             HHHHHHHc--CCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCcccccccC
Confidence            78999998  89999999986            3456889999987  77899999999999987777788887654432


Q ss_pred             c-----------h-hhhHHHHHHhhh----CCCcEEEEecCeeecCCCC------CChhHHHHHHHHcCCCccC--CCC-
Q 023110          128 R-----------H-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY------NPVEEWFFHRLKAGRPIPI--PGS-  182 (287)
Q Consensus       128 ~-----------~-~~k~~~E~~~~~----~~~~~~ilR~~~v~g~~~~------~~~~~~~~~~~~~~~~~~~--~~~-  182 (287)
                      +           | .+|+.+|.++++    .+++++++|||+|||+...      ..++..++.........+.  ... 
T Consensus       237 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~  316 (478)
T 4dqv_A          237 PTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPD  316 (478)
T ss_dssp             CEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCC
T ss_pred             cccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccc
Confidence            2           5 999999998854    4899999999999998531      2244444444433222221  111 


Q ss_pred             -----CCceeeeeeHHHHHHHHHHHHcC----CccCCceEEecCCcc--cCHHHHHHHHHHHhCCCCCeEEeCC
Q 023110          183 -----GIQVTQLGHVKDLARAFVQVLGN----EKASRQVFNISGEKY--VTFDGLARACAKAAGFPEPELVHYN  245 (287)
Q Consensus       183 -----~~~~~~~i~~~D~a~~~~~~~~~----~~~~~~~~~i~~~~~--~s~~e~~~~i~~~~g~~~~~~~~~~  245 (287)
                           ++..++++|++|+|++++.++.+    +...+++||+++++.  +|+.|+++.+.+. |.+.+.+.+++
T Consensus       317 ~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~~~i~~~~  389 (478)
T 4dqv_A          317 SEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYPIRRIDDFA  389 (478)
T ss_dssp             TTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCSCEEESSHH
T ss_pred             cccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCCcccCCCHH
Confidence                 26789999999999999999876    444678999999988  9999999999995 77653433343

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.97  E-value=8.4e-31  Score=209.28  Aligned_cols=201  Identities=20%  Similarity=0.189  Sum_probs=158.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||++|++++++|+++|++|++++|++... ..+           ..+++++.+|+.|.+++.++++  ++|+|||++
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a   75 (227)
T 3dhn_A           10 IGASGFVGSALLNEALNRGFEVTAVVRHPEKI-KIE-----------NEHLKVKKADVSSLDEVCEVCK--GADAVISAF   75 (227)
T ss_dssp             ETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC-CCC-----------CTTEEEECCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEEcCcccc-hhc-----------cCceEEEEecCCCHHHHHHHhc--CCCEEEEeC
Confidence            69999999999999999999999999997653 222           2589999999999999999999  899999999


Q ss_pred             CCC----------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHh---h-hCC
Q 023110           81 GRE----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL---E-SKG  143 (287)
Q Consensus        81 ~~~----------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~---~-~~~  143 (287)
                      +..          +.++.++++++.  ++++|||+||.++|...... ..++.+..|.+.| .+|..+|.++   . +.+
T Consensus        76 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  154 (227)
T 3dhn_A           76 NPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL-RLMDSGEVPENILPGVKALGEFYLNFLMKEKE  154 (227)
T ss_dssp             CC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE-EGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCS
T ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC-ccccCCcchHHHHHHHHHHHHHHHHHHhhccC
Confidence            874          556888999987  78899999999877654432 3455566677777 9999999554   3 578


Q ss_pred             CcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccCH
Q 023110          144 VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTF  223 (287)
Q Consensus       144 ~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~  223 (287)
                      ++++++||+.+|||+......       ..+....+. .++. ++++|++|+|++++.+++++...+++|+++++++.++
T Consensus       155 ~~~~ilrp~~v~g~~~~~~~~-------~~~~~~~~~-~~~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~  225 (227)
T 3dhn_A          155 IDWVFFSPAADMRPGVRTGRY-------RLGKDDMIV-DIVG-NSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHH  225 (227)
T ss_dssp             SEEEEEECCSEEESCCCCCCC-------EEESSBCCC-CTTS-CCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC-
T ss_pred             ccEEEEeCCcccCCCccccce-------eecCCCccc-CCCC-CcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhccc
Confidence            999999999999997543221       122222222 2222 8999999999999999999988899999999999887


Q ss_pred             HH
Q 023110          224 DG  225 (287)
Q Consensus       224 ~e  225 (287)
                      .+
T Consensus       226 ~~  227 (227)
T 3dhn_A          226 HH  227 (227)
T ss_dssp             --
T ss_pred             CC
Confidence            53

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=2.1e-30  Score=219.84  Aligned_cols=232  Identities=16%  Similarity=0.178  Sum_probs=181.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhh-hhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||||++|++|+++|++.|++|++++|+.+.......     .+ .....+++++.+|+.|.+++.+++++.++|+|||+
T Consensus        16 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-----~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~   90 (346)
T 3i6i_A           16 AGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-----IFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST   90 (346)
T ss_dssp             ECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-----HHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-----HHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence            7999999999999999999999999998733111110     00 00136899999999999999999987789999999


Q ss_pred             CCC-CcccHHHHHHhCC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhhCCCcEEEEecCee
Q 023110           80 NGR-EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYI  154 (287)
Q Consensus        80 a~~-~~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~~~~~~ilR~~~v  154 (287)
                      ++. ++.++.+++++++  + +++||+ |   +||.    +.+|.++..|...| .+|+.+|.++++.+++++++||+.+
T Consensus        91 a~~~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivrpg~~  162 (346)
T 3i6i_A           91 VGGESILDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSI  162 (346)
T ss_dssp             CCGGGGGGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTCCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEECCEE
T ss_pred             CchhhHHHHHHHHHHHHHcCCceEEee-c---ccCC----CCCccCcCCCcchHHHHHHHHHHHHHHcCCCEEEEEeccc
Confidence            987 6888999999987  7 888885 4   4542    24555666666555 9999999999999999999999999


Q ss_pred             ecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecC-CcccCHHHHHHHHHHH
Q 023110          155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG-EKYVTFDGLARACAKA  233 (287)
Q Consensus       155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~-~~~~s~~e~~~~i~~~  233 (287)
                      +|..... +.. .......+..+.++++++..+++++++|+|++++.++.++...++.|++++ ++.+|+.|+++.+++.
T Consensus       163 ~g~~~~~-~~~-~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~  240 (346)
T 3i6i_A          163 ASWPYYN-NIH-PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKK  240 (346)
T ss_dssp             SSCCCSC-C------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHH
T ss_pred             ccccCcc-ccc-cccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHH
Confidence            9975221 111 111112445667778899999999999999999999998876688999986 4889999999999999


Q ss_pred             hCCCCCeEEeCCccc
Q 023110          234 AGFPEPELVHYNPKE  248 (287)
Q Consensus       234 ~g~~~~~~~~~~~~~  248 (287)
                      +|.+. .+.+.+...
T Consensus       241 ~g~~~-~~~~~~~~~  254 (346)
T 3i6i_A          241 IGRTL-PRVTVTEDD  254 (346)
T ss_dssp             HTSCC-CEEEECHHH
T ss_pred             HCCCC-ceEecCHHH
Confidence            99886 565555543

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.97  E-value=6.2e-30  Score=218.77  Aligned_cols=191  Identities=17%  Similarity=0.167  Sum_probs=163.5

Q ss_pred             CCcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||+|++|+++|+++|+ +|++++|+                              .|++++.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~~v~~~d~~------------------------------~d~~~l~~~~~--~~d~Vih~   53 (369)
T 3st7_A            6 TGAKGFVGKNLKADLTSTTDHHIFEVHRQ------------------------------TKEEELESALL--KADFIVHL   53 (369)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEECCTT------------------------------CCHHHHHHHHH--HCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEECCC------------------------------CCHHHHHHHhc--cCCEEEEC
Confidence            79999999999999999998 77776654                              47778899998  89999999


Q ss_pred             CCC------------CcccHHHHHHhCC--CCc-cEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhh---
Q 023110           80 NGR------------EADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLES---  141 (287)
Q Consensus        80 a~~------------~~~~~~~ll~~~~--~~~-~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~---  141 (287)
                      |+.            |+.++.+++++++  +++ +|||+||..+|+              ...|..+|..+|.++++   
T Consensus        54 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~--------------~~~Y~~sK~~~E~~~~~~~~  119 (369)
T 3st7_A           54 AGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ--------------DNPYGESKLQGEQLLREYAE  119 (369)
T ss_dssp             CCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS--------------CSHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC--------------CCCchHHHHHHHHHHHHHHH
Confidence            986            4567899999987  666 999999999976              22345999999998865   


Q ss_pred             -CCCcEEEEecCeeecCCCC---CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccC-CceEEec
Q 023110          142 -KGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS-RQVFNIS  216 (287)
Q Consensus       142 -~~~~~~ilR~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~-~~~~~i~  216 (287)
                       .+++++++||+++|||+..   ..+...++..+..+.++.+ .++++.++++|++|+|++++.+++++... +++||++
T Consensus       120 ~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~  198 (369)
T 3st7_A          120 EYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVP  198 (369)
T ss_dssp             HHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCS
T ss_pred             HhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeC
Confidence             7899999999999999753   3577788888888887766 47788999999999999999999887653 7899999


Q ss_pred             CCcccCHHHHHHHHHHHhCCCC
Q 023110          217 GEKYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       217 ~~~~~s~~e~~~~i~~~~g~~~  238 (287)
                      +++.+|+.|+++.+++.+|.+.
T Consensus       199 ~~~~~s~~e~~~~~~~~~g~~~  220 (369)
T 3st7_A          199 NVFKVTLGEIVDLLYKFKQSRL  220 (369)
T ss_dssp             CCEEEEHHHHHHHHHHHHHHHH
T ss_pred             CCCceeHHHHHHHHHHHhCCCc
Confidence            9999999999999999998753

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.96  E-value=4.9e-30  Score=223.46  Aligned_cols=228  Identities=17%  Similarity=0.190  Sum_probs=175.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccc--ccCCCCChh-----hhhhhcCCeEEEEecCCChHHHHhhhhcCCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQ-----EFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~--~~~~~~~~~-----~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~   73 (287)
                      |||||+||++|+++|++.|++|++++|+.....  ..+......     .......+++++.+|+.|++.+. .+.  ++
T Consensus        75 TGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~--~~  151 (427)
T 4f6c_A           75 TGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPE--NM  151 (427)
T ss_dssp             ECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-CSS--CC
T ss_pred             ecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-CcC--CC
Confidence            799999999999999999999999999987311  000000000     01112468999999999987777 554  99


Q ss_pred             cEEEecCCC-------------CcccHHHHHHhCC-CCccEEEEecceeecc-----CCCCCCCCCCC---CCCCcch-h
Q 023110           74 DVVYDINGR-------------EADEVEPILDALP-NLEQFIYCSSAGVYLK-----SDLLPHCETDT---VDPKSRH-K  130 (287)
Q Consensus        74 d~vi~~a~~-------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~-----~~~~~~~e~~~---~~~~~~~-~  130 (287)
                      |+|||+|+.             |+.++.++++++. ++++|||+||..+ |.     ....+++|+++   ..|.+.| .
T Consensus       152 d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~  230 (427)
T 4f6c_A          152 DTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTR  230 (427)
T ss_dssp             SEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCCCCSHHHH
T ss_pred             CEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCccccccccccCCCCCCchHH
Confidence            999999986             3456788999887 8899999999998 43     23456777776   3455566 9


Q ss_pred             hhHHHHHHhhh---CCCcEEEEecCeeecCCCCC--------ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          131 GKLNTESVLES---KGVNWTSLRPVYIYGPLNYN--------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       131 ~k~~~E~~~~~---~~~~~~ilR~~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      +|+.+|.++++   .+++++++|||+||||....        .++..++.....+..++. +.++..+++++++|+|+++
T Consensus       231 sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~DvA~ai  309 (427)
T 4f6c_A          231 SKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQI  309 (427)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEEEeeHHHHHHHH
Confidence            99999998865   79999999999999997543        235566777777766654 3457889999999999999


Q ss_pred             HHHHcCCccCCceEEecCCcccCHHHHHHHHHHHhC
Q 023110          200 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG  235 (287)
Q Consensus       200 ~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g  235 (287)
                      +.++.++. .+++||+++++++|+.|+++.+.+ ++
T Consensus       310 ~~~~~~~~-~g~~~~l~~~~~~s~~el~~~i~~-~g  343 (427)
T 4f6c_A          310 VALAQVNT-PQIIYHVLSPNKMPVKSLLECVKR-KE  343 (427)
T ss_dssp             HHHTTSCC-CCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred             HHHHcCCC-CCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence            99998877 788999999999999999999998 66

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.96  E-value=7.5e-30  Score=226.88  Aligned_cols=228  Identities=17%  Similarity=0.185  Sum_probs=177.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccc--ccC----CCCC-hhhhhhhcCCeEEEEecCCChHHHHhhhhcCCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQL----PGES-DQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~--~~~----~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~   73 (287)
                      ||||||||++|+++|.+.|++|++++|+.....  ..+    .... .........+++++.+|+.+++.+. ...  ++
T Consensus       156 TGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~--~~  232 (508)
T 4f6l_B          156 TGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPE--NM  232 (508)
T ss_dssp             SCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-CSS--CC
T ss_pred             ECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-Ccc--CC
Confidence            799999999999999888999999999987311  000    0000 0001112468999999999977777 554  99


Q ss_pred             cEEEecCCC-------------CcccHHHHHHhCC-CCccEEEEecceeecc-----CCCCCCCCCCC---CCCCcch-h
Q 023110           74 DVVYDINGR-------------EADEVEPILDALP-NLEQFIYCSSAGVYLK-----SDLLPHCETDT---VDPKSRH-K  130 (287)
Q Consensus        74 d~vi~~a~~-------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~-----~~~~~~~e~~~---~~~~~~~-~  130 (287)
                      |+|||+|+.             |+.++.++++++. +.++|||+||.++ |.     ....+++|+++   ..|.+.| .
T Consensus       233 D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~  311 (508)
T 4f6l_B          233 DTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTR  311 (508)
T ss_dssp             SEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSBCCCSHHHH
T ss_pred             CEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCccCCcCcccccccccccccCCCcHHH
Confidence            999999986             3556889999987 7899999999999 43     23446777776   3345555 9


Q ss_pred             hhHHHHHHhhh---CCCcEEEEecCeeecCCCCCC--------hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          131 GKLNTESVLES---KGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       131 ~k~~~E~~~~~---~~~~~~ilR~~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      +|+.+|.++++   .+++++++||+.|||+.....        .+..++........++. +.+++.+++++++|+|+++
T Consensus       312 sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~v~v~DvA~ai  390 (508)
T 4f6l_B          312 SKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQI  390 (508)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEEEEcHHHHHHHH
Confidence            99999998864   799999999999999974332        35566777776666655 4467899999999999999


Q ss_pred             HHHHcCCccCCceEEecCCcccCHHHHHHHHHHHh
Q 023110          200 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKAA  234 (287)
Q Consensus       200 ~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~  234 (287)
                      +.++.++. .+++||+++++.+|+.|+++.+.+..
T Consensus       391 ~~~~~~~~-~~~~~nl~~~~~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          391 VALAQVNT-PQIIYHVLSPNKMPVKSLLECVKRKE  424 (508)
T ss_dssp             HHHTTBCC-SCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred             HHHHhCCC-CCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence            99998876 78899999999999999999999865

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.96  E-value=2e-29  Score=200.22  Aligned_cols=192  Identities=15%  Similarity=0.173  Sum_probs=158.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC-hHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d-~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||||++|++++++|+++|++|++++|+..... .            ..+++++.+|+.| ++++.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~------------~~~~~~~~~D~~d~~~~~~~~~~--~~d~vi~~   70 (219)
T 3dqp_A            6 VGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP-Q------------YNNVKAVHFDVDWTPEEMAKQLH--GMDAIINV   70 (219)
T ss_dssp             ESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC-C------------CTTEEEEECCTTSCHHHHHTTTT--TCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCccchh-h------------cCCceEEEecccCCHHHHHHHHc--CCCEEEEC
Confidence            799999999999999999999999999976521 1            1479999999999 999999999  89999999


Q ss_pred             CCC--------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHh-hhCCCcEE
Q 023110           80 NGR--------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL-ESKGVNWT  147 (287)
Q Consensus        80 a~~--------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~-~~~~~~~~  147 (287)
                      ++.        +..++.+++++++  ++++||++||..+++..   +..| .+..|.+.| .+|..+|.++ +..+++++
T Consensus        71 ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~  146 (219)
T 3dqp_A           71 SGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-AGFDALKDYYIAKHFADLYLTKETNLDYT  146 (219)
T ss_dssp             CCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-HHHHHTHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-cccccccHHHHHHHHHHHHHHhccCCcEE
Confidence            986        4566889999987  78899999998776543   2334 334445555 9999999999 78899999


Q ss_pred             EEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccCHHHHH
Q 023110          148 SLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA  227 (287)
Q Consensus       148 ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~  227 (287)
                      ++||+.+||+.....+              ..   ++..+++++++|+|++++.++.++...+++||++++. .++.|+.
T Consensus       147 ilrp~~v~g~~~~~~~--------------~~---~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~-~~~~e~~  208 (219)
T 3dqp_A          147 IIQPGALTEEEATGLI--------------DI---NDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK-TAIKEAL  208 (219)
T ss_dssp             EEEECSEECSCCCSEE--------------EE---SSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECS-EEHHHHH
T ss_pred             EEeCceEecCCCCCcc--------------cc---CCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCC-ccHHHHH
Confidence            9999999998543221              11   1466899999999999999999887678999998875 8999887


Q ss_pred             HH
Q 023110          228 RA  229 (287)
Q Consensus       228 ~~  229 (287)
                      +.
T Consensus       209 ~~  210 (219)
T 3dqp_A          209 ES  210 (219)
T ss_dssp             HT
T ss_pred             HH
Confidence            64

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.96  E-value=1.2e-28  Score=208.47  Aligned_cols=206  Identities=17%  Similarity=0.227  Sum_probs=166.3

Q ss_pred             CCcccchHHHHHHHHHHc-CC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKE-GH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||||++|++++++|+++ |+ +|++++|+.........     .+.  ..+++++.+|+.|.+.+.++++  ++|+|||
T Consensus        27 TGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~-----~~~--~~~v~~~~~Dl~d~~~l~~~~~--~~D~Vih   97 (344)
T 2gn4_A           27 TGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAM-----EFN--DPRMRFFIGDVRDLERLNYALE--GVDICIH   97 (344)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHH-----HHC--CTTEEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHH-----Hhc--CCCEEEEECCCCCHHHHHHHHh--cCCEEEE
Confidence            799999999999999999 97 99999998654211000     000  2578999999999999999998  8999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHh
Q 023110           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        79 ~a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (287)
                      +|+..                +.++.++++++.  ++++||++||..++.              |.+.| .+|..+|.++
T Consensus        98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~--------------p~~~Y~~sK~~~E~~~  163 (344)
T 2gn4_A           98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN--------------PINLYGATKLCSDKLF  163 (344)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS--------------CCSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC--------------CccHHHHHHHHHHHHH
Confidence            99864                234678888876  889999999976531              23445 9999999987


Q ss_pred             hh-------CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCC-CccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCc
Q 023110          140 ES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (287)
Q Consensus       140 ~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (287)
                      +.       .+++++++|||++|||+.  .+++.++..+..++ ++.+. ++...++++|++|+|++++.+++++. .++
T Consensus       164 ~~~~~~~~~~g~~~~~vRpg~v~g~~~--~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l~~~~-~g~  239 (344)
T 2gn4_A          164 VSANNFKGSSQTQFSVVRYGNVVGSRG--SVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSLKRMH-GGE  239 (344)
T ss_dssp             HHGGGCCCSSCCEEEEECCCEETTCTT--SHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHHHHCC-SSC
T ss_pred             HHHHHHhCCCCcEEEEEEeccEECCCC--CHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHHhhcc-CCC
Confidence            53       469999999999999863  46677777787887 66664 67788999999999999999998764 577


Q ss_pred             eEEecCCcccCHHHHHHHHHHHh
Q 023110          212 VFNISGEKYVTFDGLARACAKAA  234 (287)
Q Consensus       212 ~~~i~~~~~~s~~e~~~~i~~~~  234 (287)
                      +|++.++ .+|+.|+++.+.+.+
T Consensus       240 ~~~~~~~-~~s~~el~~~i~~~~  261 (344)
T 2gn4_A          240 IFVPKIP-SMKMTDLAKALAPNT  261 (344)
T ss_dssp             EEEECCC-EEEHHHHHHHHCTTC
T ss_pred             EEecCCC-cEEHHHHHHHHHHhC
Confidence            9998876 599999999998755

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.96  E-value=2.3e-28  Score=204.39  Aligned_cols=232  Identities=13%  Similarity=0.147  Sum_probs=171.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccc-cccCCCCChhhhhh-hcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||||++|++++++|+++|++|++++|+.+.. ....     ..+.. ...+++++.+|+.|++++.++++  ++|+|||
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~   82 (313)
T 1qyd_A           10 VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKV-----QMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVIS   82 (313)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHH-----HHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEE
T ss_pred             EcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHH-----HHHHHHHhCCeEEEeCCCCCHHHHHHHHh--CCCEEEE
Confidence            69999999999999999999999999986431 0000     00000 13579999999999999999999  8999999


Q ss_pred             cCCC-----CcccHHHHHHhCC--C-CccEEEEecceeeccCCCCCCCCCCCCCC-CcchhhhHHHHHHhhhCCCcEEEE
Q 023110           79 INGR-----EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSL  149 (287)
Q Consensus        79 ~a~~-----~~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~~~k~~~E~~~~~~~~~~~il  149 (287)
                      +++.     +...+.+++++++  + +++||+ |   +||.....+   ..+..| .+.|.+|..+|.++++.+++++++
T Consensus        83 ~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~y~sK~~~e~~~~~~g~~~~il  155 (313)
T 1qyd_A           83 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPGSITFIDKRKVRRAIEAASIPYTYV  155 (313)
T ss_dssp             CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSSTTHHHHHHHHHHHHHHHTTCCBCEE
T ss_pred             CCccccchhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCCcchHHHHHHHHHHHHhcCCCeEEE
Confidence            9986     4667899999987  6 889985 3   455322211   122233 334599999999999999999999


Q ss_pred             ecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCC-cccCHHHHHH
Q 023110          150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLAR  228 (287)
Q Consensus       150 R~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~-~~~s~~e~~~  228 (287)
                      ||+.++|+.... +..........++.+.++++++..+++++++|+|++++.++.++...++.|+++++ +.+|+.|+++
T Consensus       156 rp~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~  234 (313)
T 1qyd_A          156 SSNMFAGYFAGS-LAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQ  234 (313)
T ss_dssp             ECCEEHHHHTTT-SSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHH
T ss_pred             Eeceeccccccc-cccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHH
Confidence            999988752110 00000000123345566678888999999999999999999887656778888765 7899999999


Q ss_pred             HHHHHhCCCCCeEEeCCccc
Q 023110          229 ACAKAAGFPEPELVHYNPKE  248 (287)
Q Consensus       229 ~i~~~~g~~~~~~~~~~~~~  248 (287)
                      .+.+.+|++. .+.+.+...
T Consensus       235 ~~~~~~g~~~-~~~~~~~~~  253 (313)
T 1qyd_A          235 IWERLSEQNL-DKIYISSQD  253 (313)
T ss_dssp             HHHHHHTCCC-EECCBCSHH
T ss_pred             HHHHhcCCCC-ceEECCHHH
Confidence            9999999876 666666443

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.96  E-value=2.6e-28  Score=204.56  Aligned_cols=225  Identities=19%  Similarity=0.232  Sum_probs=172.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||++|++++++|+++|++|++++|+.+.....+.     .+  ...+++++.+|+.|++++.++++  ++|+|||++
T Consensus        17 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-----~l--~~~~v~~v~~Dl~d~~~l~~a~~--~~d~vi~~a   87 (318)
T 2r6j_A           17 FGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLD-----EF--QSLGAIIVKGELDEHEKLVELMK--KVDVVISAL   87 (318)
T ss_dssp             ETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHH-----HH--HHTTCEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHH-----Hh--hcCCCEEEEecCCCHHHHHHHHc--CCCEEEECC
Confidence            6999999999999999999999999998752111110     00  13579999999999999999999  899999999


Q ss_pred             CCC-cccHHHHHHhCC--C-CccEEEEecceeeccCCCCCCCCCCCCCC-CcchhhhHHHHHHhhhCCCcEEEEecCeee
Q 023110           81 GRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYIY  155 (287)
Q Consensus        81 ~~~-~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~~~k~~~E~~~~~~~~~~~ilR~~~v~  155 (287)
                      +.. ...+.+++++++  + +++||+ |   +||...    ++..+..| ...|.+|..+|.++++.+++++++||+.++
T Consensus        88 ~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lr~~~~~  159 (318)
T 2r6j_A           88 AFPQILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFA  159 (318)
T ss_dssp             CGGGSTTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTCCCCHHHHHHHHHHHHHHHHHHHTTCCBEEEECCEEH
T ss_pred             chhhhHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccccCCCCcchhHHHHHHHHHHHHhcCCCeEEEEcceeh
Confidence            864 567899999987  6 889984 4   354321    22233333 234589999999999999999999999877


Q ss_pred             cCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecC-CcccCHHHHHHHHHHHh
Q 023110          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG-EKYVTFDGLARACAKAA  234 (287)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~-~~~~s~~e~~~~i~~~~  234 (287)
                      +.     +.+.++.....++.+.++++++..+++++++|+|++++.++.++...++.|++.+ ++.+|+.|+++.+.+.+
T Consensus       160 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~  234 (318)
T 2r6j_A          160 SY-----FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKI  234 (318)
T ss_dssp             HH-----HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHH
T ss_pred             hh-----hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHh
Confidence            64     2333332223445556667788899999999999999999988765677888875 47899999999999999


Q ss_pred             CCCCCeEEeCCccc
Q 023110          235 GFPEPELVHYNPKE  248 (287)
Q Consensus       235 g~~~~~~~~~~~~~  248 (287)
                      |++. .+...+...
T Consensus       235 g~~~-~~~~~~~~~  247 (318)
T 2r6j_A          235 GKKF-KKIHVPEEE  247 (318)
T ss_dssp             TCCC-EEEEECHHH
T ss_pred             CCCC-ceeecCHHH
Confidence            9876 666666543

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.96  E-value=3.1e-28  Score=193.44  Aligned_cols=200  Identities=18%  Similarity=0.236  Sum_probs=133.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||+||++++++|+++|++|++++|++..... +           ..+++++.+|+.|.++  +.+.  ++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-~-----------~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~a   69 (221)
T 3ew7_A            6 IGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ-T-----------HKDINILQKDIFDLTL--SDLS--DQNVVVDAY   69 (221)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH-H-----------CSSSEEEECCGGGCCH--HHHT--TCSEEEECC
T ss_pred             EcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh-c-----------cCCCeEEeccccChhh--hhhc--CCCEEEECC
Confidence            7999999999999999999999999999765321 1           1578999999999877  6777  899999999


Q ss_pred             CCC-------cccHHHHHHhCC--CCccEEEEecceeecc-CCCCCCCCCCCCCCCcch-hhhHHHHHH--hh--hCCCc
Q 023110           81 GRE-------ADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESV--LE--SKGVN  145 (287)
Q Consensus        81 ~~~-------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~-~~~~~~~e~~~~~~~~~~-~~k~~~E~~--~~--~~~~~  145 (287)
                      +..       ...+.+++++++  +.+++|++||..+|.. ....+..|+.+..|..+| .+|..+|.+  ++  ..+++
T Consensus        70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~  149 (221)
T 3ew7_A           70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFS  149 (221)
T ss_dssp             CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTSC
T ss_pred             cCCccccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCcc
Confidence            874       356789999987  6899999999876543 333345566666666666 888888875  55  68999


Q ss_pred             EEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccCHHH
Q 023110          146 WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDG  225 (287)
Q Consensus       146 ~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e  225 (287)
                      ++++||+.+|||+.....   +   ...+..+...+++   .++++++|+|++++.+++++...++.|+++++...+..|
T Consensus       150 ~~ivrp~~v~g~~~~~~~---~---~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~~~  220 (221)
T 3ew7_A          150 WTYISPSAMFEPGERTGD---Y---QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHHHH  220 (221)
T ss_dssp             EEEEECSSCCCCC------------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC--------
T ss_pred             EEEEeCcceecCCCccCc---e---EeccccceecCCC---CceEeHHHHHHHHHHHHhCccccCCEEEECCCCcccccc
Confidence            999999999998432111   1   1122333333332   368999999999999999988889999999998877654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.95  E-value=7.5e-29  Score=206.07  Aligned_cols=222  Identities=18%  Similarity=0.173  Sum_probs=169.7

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCcccc-ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||||++|++++++|+++| ++|++++|++.... ..+.          ..+++++.+|+.|++++.++++  ++|+|||
T Consensus        11 tGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~----------~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~   78 (299)
T 2wm3_A           11 FGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR----------LQGAEVVQGDQDDQVIMELALN--GAYATFI   78 (299)
T ss_dssp             ETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH----------HTTCEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred             ECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH----------HCCCEEEEecCCCHHHHHHHHh--cCCEEEE
Confidence            7999999999999999998 99999999876521 1111          2578999999999999999998  8999999


Q ss_pred             cCCCC--------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCCCcEEE
Q 023110           79 INGRE--------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTS  148 (287)
Q Consensus        79 ~a~~~--------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~i  148 (287)
                      +++..        ...+.+++++++  ++++||++|+..+|+....      .  .+..|+.+|..+|.++++.++++++
T Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~------~--~~~~y~~sK~~~e~~~~~~gi~~~i  150 (299)
T 2wm3_A           79 VTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG------R--LAAAHFDGKGEVEEYFRDIGVPMTS  150 (299)
T ss_dssp             CCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTT------S--CCCHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             eCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCC------c--ccCchhhHHHHHHHHHHHCCCCEEE
Confidence            98742        335778888887  8899999998888764221      1  1233559999999999999999999


Q ss_pred             EecCeeecCCCCCChhHHHHHHHHcCCC-ccCCCCCCceeeeeeHHHHHHHHHHHHcCCc-cCCceEEecCCcccCHHHH
Q 023110          149 LRPVYIYGPLNYNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGEKYVTFDGL  226 (287)
Q Consensus       149 lR~~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~i~~~~~~s~~e~  226 (287)
                      +||+.+||+.... +...   ....++. ......++..+++++++|+|++++.++.++. ..++.|++++ +.+|+.|+
T Consensus       151 lrp~~~~~~~~~~-~~~~---~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~~~s~~e~  225 (299)
T 2wm3_A          151 VRLPCYFENLLSH-FLPQ---KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAEEY  225 (299)
T ss_dssp             EECCEEGGGGGTT-TCCE---ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-EEECHHHH
T ss_pred             EeecHHhhhchhh-cCCc---ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee-ccCCHHHH
Confidence            9999999974210 1100   0112222 1112346678999999999999999998752 3578999987 67999999


Q ss_pred             HHHHHHHhCCCCCeEEeCCccc
Q 023110          227 ARACAKAAGFPEPELVHYNPKE  248 (287)
Q Consensus       227 ~~~i~~~~g~~~~~~~~~~~~~  248 (287)
                      ++.+.+.+|++. .+.+.+...
T Consensus       226 ~~~~~~~~g~~~-~~~~~~~~~  246 (299)
T 2wm3_A          226 AALLTKHTRKVV-HDAKMTPED  246 (299)
T ss_dssp             HHHHHHHHSSCE-EECCCCTHH
T ss_pred             HHHHHHHHCCCc-eeEecCHHH
Confidence            999999999875 555555544

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.95  E-value=4.9e-28  Score=205.29  Aligned_cols=223  Identities=15%  Similarity=0.146  Sum_probs=168.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccc-ccCCCCChhhhhhhcCCeEEEEec-CCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGD-RKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~D-~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||||++|++|+++|+++|++|++++|+.+... ..+..         ..+++++.+| +.|++++.++++  ++|+|||
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~---------~~~v~~v~~D~l~d~~~l~~~~~--~~d~Vi~   79 (352)
T 1xgk_A           11 VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA---------IPNVTLFQGPLLNNVPLMDTLFE--GAHLAFI   79 (352)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT---------STTEEEEESCCTTCHHHHHHHHT--TCSEEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhh---------cCCcEEEECCccCCHHHHHHHHh--cCCEEEE
Confidence            799999999999999999999999999876521 11110         2478999999 999999999998  8999999


Q ss_pred             cCCCC----cccHHHHHHhCC--C-CccEEEEecce--eeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCCCcEEEE
Q 023110           79 INGRE----ADEVEPILDALP--N-LEQFIYCSSAG--VYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL  149 (287)
Q Consensus        79 ~a~~~----~~~~~~ll~~~~--~-~~~~i~~Ss~~--v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~il  149 (287)
                      +++..    .....+++++++  + +++|||+||..  .|+.           ..+..|+.+|..+|.++++.+++++++
T Consensus        80 ~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----------~~~~~y~~sK~~~E~~~~~~gi~~~iv  148 (352)
T 1xgk_A           80 NTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP-----------WPAVPMWAPKFTVENYVRQLGLPSTFV  148 (352)
T ss_dssp             CCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS-----------CCCCTTTHHHHHHHHHHHTSSSCEEEE
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCC-----------CCCccHHHHHHHHHHHHHHcCCCEEEE
Confidence            98653    233588898887  7 89999999975  3321           223345699999999999999999999


Q ss_pred             ecCeeecCCCCCChhHHHHHH--HHcCCC-ccCCCCCCceeeeeeH-HHHHHHHHHHHcCCc--cCCceEEecCCcccCH
Q 023110          150 RPVYIYGPLNYNPVEEWFFHR--LKAGRP-IPIPGSGIQVTQLGHV-KDLARAFVQVLGNEK--ASRQVFNISGEKYVTF  223 (287)
Q Consensus       150 R~~~v~g~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~i~~-~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s~  223 (287)
                      ||+ +||++....+.. ++..  ...+.. +.+++++++.++++|+ +|+|++++.+++++.  ..+++|++++ +.+|+
T Consensus       149 rpg-~~g~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~-~~~s~  225 (352)
T 1xgk_A          149 YAG-IYNNNFTSLPYP-LFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSP  225 (352)
T ss_dssp             EEC-EEGGGCBSSSCS-SCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECH
T ss_pred             ecc-eecCCchhcccc-cccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec-CCCCH
Confidence            976 788754222111 1100  112222 2335667788999999 899999999998753  2578999996 67999


Q ss_pred             HHHHHHHHHHhCCCCCeEEeCCcccc
Q 023110          224 DGLARACAKAAGFPEPELVHYNPKEF  249 (287)
Q Consensus       224 ~e~~~~i~~~~g~~~~~~~~~~~~~~  249 (287)
                      .|+++.+.+.+|++. .+.++|...+
T Consensus       226 ~e~~~~i~~~~G~~~-~~~~vp~~~~  250 (352)
T 1xgk_A          226 VQVCAAFSRALNRRV-TYVQVPKVEI  250 (352)
T ss_dssp             HHHHHHHHHHHTSCE-EEEECSSCCC
T ss_pred             HHHHHHHHHHHCCCC-ceEECCHHHH
Confidence            999999999999875 6666665433

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.95  E-value=3.5e-28  Score=198.82  Aligned_cols=187  Identities=13%  Similarity=0.021  Sum_probs=150.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||+||++|+++|+++|++|++++|+....   +           ..+++++.+|+.|++.+.++++  ++|+|||++
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a   71 (267)
T 3ay3_A            8 TGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA---A-----------EAHEEIVACDLADAQAVHDLVK--DCDGIIHLG   71 (267)
T ss_dssp             ESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC---C-----------CTTEEECCCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc---c-----------CCCccEEEccCCCHHHHHHHHc--CCCEEEECC
Confidence            79999999999999999999999999987541   1           1367899999999999999998  899999999


Q ss_pred             CCC------------cccHHHHHHhCC--CCccEEEEecceeeccC-CCCCCCCCCCCCCCcch-hhhHHHHHHhh----
Q 023110           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTESVLE----  140 (287)
Q Consensus        81 ~~~------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~~~~~~~~~~-~~k~~~E~~~~----  140 (287)
                      +..            +.++.++++++.  ++++|||+||..+|+.. ...+++|+++..|.+.| .+|..+|.+++    
T Consensus        72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~  151 (267)
T 3ay3_A           72 GVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYH  151 (267)
T ss_dssp             SCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            863            345678888876  77899999999999864 34678999888887777 99999998874    


Q ss_pred             hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcc
Q 023110          141 SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (287)
Q Consensus       141 ~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~  220 (287)
                      ..+++++++||+.+|+..                      .++...++++|++|+|++++.+++++...+.+|++.++..
T Consensus       152 ~~gi~~~~lrp~~v~~~~----------------------~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~  209 (267)
T 3ay3_A          152 KFDIETLNIRIGSCFPKP----------------------KDARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANT  209 (267)
T ss_dssp             TTCCCEEEEEECBCSSSC----------------------CSHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSCS
T ss_pred             HcCCCEEEEeceeecCCC----------------------CCCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCcc
Confidence            468999999999998421                      0122356889999999999999988754456787766543


Q ss_pred             cCHHH
Q 023110          221 VTFDG  225 (287)
Q Consensus       221 ~s~~e  225 (287)
                      .++.+
T Consensus       210 ~~~~d  214 (267)
T 3ay3_A          210 ESWWD  214 (267)
T ss_dssp             SCCBC
T ss_pred             ccccC
Confidence            33333

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.95  E-value=4e-28  Score=194.84  Aligned_cols=193  Identities=12%  Similarity=0.165  Sum_probs=153.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCe-EEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||||+||++++++|+++|++|++++|+...... +.          ..++ +++.+|+.  +.+.+.+.  ++|+|||+
T Consensus        27 tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~-~~----------~~~~~~~~~~Dl~--~~~~~~~~--~~D~vi~~   91 (236)
T 3e8x_A           27 VGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE-LR----------ERGASDIVVANLE--EDFSHAFA--SIDAVVFA   91 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HH----------HTTCSEEEECCTT--SCCGGGGT--TCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH-HH----------hCCCceEEEcccH--HHHHHHHc--CCCEEEEC
Confidence            7999999999999999999999999998765321 11          2478 99999998  67788888  99999999


Q ss_pred             CCC------------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhhCCC
Q 023110           80 NGR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGV  144 (287)
Q Consensus        80 a~~------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~~~  144 (287)
                      ++.            |+.++.+++++++  ++++||++||.+.+..       +..+ .+...| .+|..+|.+++..++
T Consensus        92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~-~~~~~Y~~sK~~~e~~~~~~gi  163 (236)
T 3e8x_A           92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGP-MNMRHYLVAKRLADDELKRSSL  163 (236)
T ss_dssp             CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSC-GGGHHHHHHHHHHHHHHHHSSS
T ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCCh-hhhhhHHHHHHHHHHHHHHCCC
Confidence            986            3456888999987  8899999999555322       1111 334445 999999999999999


Q ss_pred             cEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccCHH
Q 023110          145 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD  224 (287)
Q Consensus       145 ~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~  224 (287)
                      +++++||+.++|+.....              +.........+++++++|+|++++.+++++...++.|+++++ ..++.
T Consensus       164 ~~~~lrpg~v~~~~~~~~--------------~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~-~~~~~  228 (236)
T 3e8x_A          164 DYTIVRPGPLSNEESTGK--------------VTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG-DTPIA  228 (236)
T ss_dssp             EEEEEEECSEECSCCCSE--------------EEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC-SEEHH
T ss_pred             CEEEEeCCcccCCCCCCe--------------EEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCC-CcCHH
Confidence            999999999999853221              111123344689999999999999999988667899999987 49999


Q ss_pred             HHHHHHH
Q 023110          225 GLARACA  231 (287)
Q Consensus       225 e~~~~i~  231 (287)
                      |+++.++
T Consensus       229 e~~~~i~  235 (236)
T 3e8x_A          229 KVVEQLG  235 (236)
T ss_dssp             HHHHTC-
T ss_pred             HHHHHhc
Confidence            9998765

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.95  E-value=8.7e-28  Score=191.33  Aligned_cols=198  Identities=14%  Similarity=0.133  Sum_probs=148.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||+||++|+++|+++|++|++++|+........           ..+++++.+|+.|.++  ..++  ++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----------~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~a   70 (224)
T 3h2s_A            6 LGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-----------GATVATLVKEPLVLTE--ADLD--SVDAVVDAL   70 (224)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-----------CTTSEEEECCGGGCCH--HHHT--TCSEEEECC
T ss_pred             EcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-----------CCCceEEecccccccH--hhcc--cCCEEEECC
Confidence            799999999999999999999999999876632222           2589999999999887  6777  899999999


Q ss_pred             CC---------CcccHHHHHHhCC--CCccEEEEecceeeccCCC---CCCCCCCCCCCCcch-hhhHHHHHH--h-hhC
Q 023110           81 GR---------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDL---LPHCETDTVDPKSRH-KGKLNTESV--L-ESK  142 (287)
Q Consensus        81 ~~---------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~---~~~~e~~~~~~~~~~-~~k~~~E~~--~-~~~  142 (287)
                      +.         ++.++.+++++++  + ++||++||.+.+.....   .+.++...+.|.++| .+|..+|.+  + +..
T Consensus        71 g~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~  149 (224)
T 3h2s_A           71 SVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNA  149 (224)
T ss_dssp             CCCTTSSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCT
T ss_pred             ccCCCcchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcC
Confidence            88         4567899999988  6 99999999865543222   133344444445666 899998864  2 467


Q ss_pred             CCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccC
Q 023110          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       143 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (287)
                      +++++++||+.+||++....+.       .....+..   +....++++++|+|++++.+++++...+++|++++.+..+
T Consensus       150 ~i~~~ivrp~~v~g~~~~~~~~-------~~~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~~~  219 (224)
T 3h2s_A          150 NVNWIGISPSEAFPSGPATSYV-------AGKDTLLV---GEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDADLEH  219 (224)
T ss_dssp             TSCEEEEEECSBCCCCCCCCEE-------EESSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC---
T ss_pred             CCcEEEEcCccccCCCcccCce-------eccccccc---CCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCcchh
Confidence            8999999999999985433211       11222222   2345689999999999999999988889999999977655


Q ss_pred             HH
Q 023110          223 FD  224 (287)
Q Consensus       223 ~~  224 (287)
                      +.
T Consensus       220 ~~  221 (224)
T 3h2s_A          220 HH  221 (224)
T ss_dssp             --
T ss_pred             cc
Confidence            44

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.95  E-value=7.9e-28  Score=201.88  Aligned_cols=226  Identities=17%  Similarity=0.230  Sum_probs=170.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCC-cccc-ccCCCCChhhhhh-hcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIA-QQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~-~~~~-~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      |||||++|++++++|+++|++|++++|+. +... ...     ..+.. ...+++++.+|+.|++++.++++  ++|+||
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-----~~l~~~~~~~v~~v~~D~~d~~~l~~a~~--~~d~vi   82 (321)
T 3c1o_A           10 YGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSV-----QLREEFRSMGVTIIEGEMEEHEKMVSVLK--QVDIVI   82 (321)
T ss_dssp             ETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHH-----HHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEE
T ss_pred             EcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHH-----HHHHHhhcCCcEEEEecCCCHHHHHHHHc--CCCEEE
Confidence            69999999999999999999999999986 2100 000     00000 13579999999999999999999  899999


Q ss_pred             ecCCCC-cccHHHHHHhCC--C-CccEEEEecceeeccCCCCCCCCCCCCCC-CcchhhhHHHHHHhhhCCCcEEEEecC
Q 023110           78 DINGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPV  152 (287)
Q Consensus        78 ~~a~~~-~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~~~k~~~E~~~~~~~~~~~ilR~~  152 (287)
                      |+++.. ...+.++++++.  + +++||+ |   +||...    +|..+..| .+.|.+|..+|.++++.+++++++||+
T Consensus        83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lrp~  154 (321)
T 3c1o_A           83 SALPFPMISSQIHIINAIKAAGNIKRFLP-S---DFGCEE----DRIKPLPPFESVLEKKRIIRRAIEAAALPYTYVSAN  154 (321)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHCCCCEEEC-S---CCSSCG----GGCCCCHHHHHHHHHHHHHHHHHHHHTCCBEEEECC
T ss_pred             ECCCccchhhHHHHHHHHHHhCCccEEec-c---ccccCc----cccccCCCcchHHHHHHHHHHHHHHcCCCeEEEEec
Confidence            999864 577899999987  7 899983 3   454321    22233333 233589999999999889999999999


Q ss_pred             eeecCCCCCChhHHHHHH---HHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecC-CcccCHHHHHH
Q 023110          153 YIYGPLNYNPVEEWFFHR---LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG-EKYVTFDGLAR  228 (287)
Q Consensus       153 ~v~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~-~~~~s~~e~~~  228 (287)
                      .++++     +...+...   ...++.+.++++++..+++++++|+|++++.++.++...++.|++++ ++.+|+.|+++
T Consensus       155 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~  229 (321)
T 3c1o_A          155 CFGAY-----FVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELIS  229 (321)
T ss_dssp             EEHHH-----HHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHH
T ss_pred             eeccc-----cccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHH
Confidence            88875     22222211   12334455667788899999999999999999988765678888886 47899999999


Q ss_pred             HHHHHhCCCCCeEEeCCcc
Q 023110          229 ACAKAAGFPEPELVHYNPK  247 (287)
Q Consensus       229 ~i~~~~g~~~~~~~~~~~~  247 (287)
                      .+.+.+|++. .+...+..
T Consensus       230 ~~~~~~g~~~-~~~~~~~~  247 (321)
T 3c1o_A          230 LWEAKSGLSF-KKVHMPDE  247 (321)
T ss_dssp             HHHHHHTSCC-CEEEECHH
T ss_pred             HHHHHcCCcc-eeeeCCHH
Confidence            9999999876 55665543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.95  E-value=6.2e-28  Score=201.34  Aligned_cols=229  Identities=16%  Similarity=0.202  Sum_probs=171.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccc--cccCCCCChhhhhh-hcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI--AQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      |||||++|++++++|+++|++|++++|+.+..  ....     ..+.. ...+++++.+|+.|++++.++++  ++|+||
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-----~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi   82 (308)
T 1qyc_A           10 IGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKA-----QLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVI   82 (308)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHH-----HHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEE
T ss_pred             EcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHH-----HHHHHHHhCCCEEEEeccCCHHHHHHHHc--CCCEEE
Confidence            69999999999999999999999999986431  0000     00000 13579999999999999999999  899999


Q ss_pred             ecCCCC-cccHHHHHHhCC--C-CccEEEEecceeeccCCCCCCCCCCCCCC-CcchhhhHHHHHHhhhCCCcEEEEecC
Q 023110           78 DINGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPV  152 (287)
Q Consensus        78 ~~a~~~-~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~~~k~~~E~~~~~~~~~~~ilR~~  152 (287)
                      |+++.. ...+.+++++++  + +++||+ |   +||..    .++..+..| .+.|.+|..+|.++++.+++++++||+
T Consensus        83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~~r~~  154 (308)
T 1qyc_A           83 STVGSLQIESQVNIIKAIKEVGTVKRFFP-S---EFGND----VDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSN  154 (308)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHCCCSEEEC-S---CCSSC----TTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECC
T ss_pred             ECCcchhhhhHHHHHHHHHhcCCCceEee-c---ccccC----ccccccCCcchhHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            999864 567889999987  6 899984 4   34432    123333344 234599999999999889999999999


Q ss_pred             eeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCC-cccCHHHHHHHHH
Q 023110          153 YIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARACA  231 (287)
Q Consensus       153 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~-~~~s~~e~~~~i~  231 (287)
                      .++|+.... +... ......++.+.++++++..+++++++|+|++++.++.++...++.|+++++ +.+|+.|+++.+.
T Consensus       155 ~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~  232 (308)
T 1qyc_A          155 CFAGYFLRS-LAQA-GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWE  232 (308)
T ss_dssp             EEHHHHTTT-TTCT-TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHH
T ss_pred             eeccccccc-cccc-cccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHH
Confidence            998853111 1000 000113344556678888999999999999999999887656778888764 7899999999999


Q ss_pred             HHhCCCCCeEEeCCcc
Q 023110          232 KAAGFPEPELVHYNPK  247 (287)
Q Consensus       232 ~~~g~~~~~~~~~~~~  247 (287)
                      +.+|++. .+...+..
T Consensus       233 ~~~g~~~-~~~~~~~~  247 (308)
T 1qyc_A          233 KKIDKTL-EKAYVPEE  247 (308)
T ss_dssp             HHTTSCC-EEEEECHH
T ss_pred             HHhCCCC-ceEeCCHH
Confidence            9999886 66666643

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.95  E-value=3e-27  Score=197.06  Aligned_cols=227  Identities=18%  Similarity=0.206  Sum_probs=170.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcc-cc--ccCCCCChhhhhh-hcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IA--QQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~-~~--~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      |||||++|++++++|+++|++|++++|+.+. ..  ...     ..+.. ...+++++.+|+.|++++.++++  ++|+|
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-----~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~v   80 (307)
T 2gas_A            8 LGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKE-----ELIDNYQSLGVILLEGDINDHETLVKAIK--QVDIV   80 (307)
T ss_dssp             ESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHH-----HHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEE
T ss_pred             ECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHH-----HHHHHHHhCCCEEEEeCCCCHHHHHHHHh--CCCEE
Confidence            6999999999999999999999999998621 00  000     00000 13578999999999999999999  89999


Q ss_pred             EecCCCC-cccHHHHHHhCC--C-CccEEEEecceeeccCCCCCCCCCCCCCC-CcchhhhHHHHHHhhhCCCcEEEEec
Q 023110           77 YDINGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRP  151 (287)
Q Consensus        77 i~~a~~~-~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~~~k~~~E~~~~~~~~~~~ilR~  151 (287)
                      ||+++.. ...+.+++++++  + +++||+ |   +||...    ++.....| .+.|.+|..+|.++++.+++++++||
T Consensus        81 i~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~i~~~~lrp  152 (307)
T 2gas_A           81 ICAAGRLLIEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCC  152 (307)
T ss_dssp             EECSSSSCGGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEEC
T ss_pred             EECCcccccccHHHHHHHHHhcCCceEEee-c---ccccCc----ccccCCCcchhHHHHHHHHHHHHHHcCCCeEEEEc
Confidence            9999864 577889999987  6 899983 3   454321    22233344 23459999999999999999999999


Q ss_pred             CeeecCCCCCChhHHHHHH---HHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCC-cccCHHHHH
Q 023110          152 VYIYGPLNYNPVEEWFFHR---LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLA  227 (287)
Q Consensus       152 ~~v~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~-~~~s~~e~~  227 (287)
                      +.++++..     +.+...   ...++.+.++++++..+++++++|+|++++.++.++...++.|++.++ +.+|+.|++
T Consensus       153 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~  227 (307)
T 2gas_A          153 HAFTGYFL-----RNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVI  227 (307)
T ss_dssp             CEETTTTG-----GGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHH
T ss_pred             ceeecccc-----ccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHH
Confidence            99888631     111110   113334555677788999999999999999999887656778888764 689999999


Q ss_pred             HHHHHHhCCCCCeEEeCCccc
Q 023110          228 RACAKAAGFPEPELVHYNPKE  248 (287)
Q Consensus       228 ~~i~~~~g~~~~~~~~~~~~~  248 (287)
                      +.+.+.+|++. .+.+.+...
T Consensus       228 ~~~~~~~g~~~-~~~~~~~~~  247 (307)
T 2gas_A          228 ALWEKKIGKTL-EKTYVSEEQ  247 (307)
T ss_dssp             HHHHHHHTSCC-EEEEECHHH
T ss_pred             HHHHHHhCCCC-ceeecCHHH
Confidence            99999999876 666666443

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.94  E-value=4.8e-27  Score=190.35  Aligned_cols=204  Identities=14%  Similarity=0.122  Sum_probs=156.8

Q ss_pred             CCcccchHHHHHHHHHHc--CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+|+||++++++|+++  |++|++++|++.... .+           ..+++++.+|+.|.+++.++++  ++|+|||
T Consensus        10 tGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~-~~-----------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   75 (253)
T 1xq6_A           10 TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-KI-----------GGEADVFIGDITDADSINPAFQ--GIDALVI   75 (253)
T ss_dssp             ESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHH-HT-----------TCCTTEEECCTTSHHHHHHHHT--TCSEEEE
T ss_pred             EcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchh-hc-----------CCCeeEEEecCCCHHHHHHHHc--CCCEEEE
Confidence            799999999999999999  899999999865421 11           2467899999999999999998  8999999


Q ss_pred             cCCCC-----------------------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCC-
Q 023110           79 INGRE-----------------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-  126 (287)
Q Consensus        79 ~a~~~-----------------------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~-  126 (287)
                      +++..                             +.++.++++++.  ++++||++||..++..        ..+..+. 
T Consensus        76 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~--------~~~~~~~~  147 (253)
T 1xq6_A           76 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP--------DHPLNKLG  147 (253)
T ss_dssp             CCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT--------TCGGGGGG
T ss_pred             eccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC--------CCcccccc
Confidence            99853                             124678888876  7889999999876421        1111121 


Q ss_pred             --cchhhhHHHHHHhhhCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          127 --SRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       127 --~~~~~k~~~E~~~~~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                        .|..+|..+|.+++..+++++++||+.+||+.... .+.        .+....++++   ...+++++|+|++++.++
T Consensus       148 ~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~~~--------~~~~~~~~~~---~~~~~~~~Dva~~~~~~~  216 (253)
T 1xq6_A          148 NGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELL--------VGKDDELLQT---DTKTVPRADVAEVCIQAL  216 (253)
T ss_dssp             GCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSSCEE--------EESTTGGGGS---SCCEEEHHHHHHHHHHHT
T ss_pred             chhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchhhhh--------ccCCcCCcCC---CCcEEcHHHHHHHHHHHH
Confidence              12368999999999999999999999999986321 111        1111111111   346899999999999999


Q ss_pred             cCCccCCceEEecCCc---ccCHHHHHHHHHHHhCCC
Q 023110          204 GNEKASRQVFNISGEK---YVTFDGLARACAKAAGFP  237 (287)
Q Consensus       204 ~~~~~~~~~~~i~~~~---~~s~~e~~~~i~~~~g~~  237 (287)
                      +++...+++||+++++   .+|+.|+++.+++.+|++
T Consensus       217 ~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~  253 (253)
T 1xq6_A          217 LFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF  253 (253)
T ss_dssp             TCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred             cCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence            8876568899999964   599999999999988863

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.94  E-value=1.3e-26  Score=189.34  Aligned_cols=197  Identities=12%  Similarity=0.020  Sum_probs=163.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+|+||++++++|+++|++|++++|+.....              ..+++++.+|+.|.+++.++++  ++|+|||+|
T Consensus         9 TGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~A   72 (267)
T 3rft_A            9 TGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------------GPNEECVQCDLADANAVNAMVA--GCDGIVHLG   72 (267)
T ss_dssp             ESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------------CTTEEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------------CCCCEEEEcCCCCHHHHHHHHc--CCCEEEECC
Confidence            799999999999999999999999999976521              2578999999999999999999  999999999


Q ss_pred             CCC------------cccHHHHHHhCC--CCccEEEEecceeecc-CCCCCCCCCCCCCCCcch-hhhHHHHHHhh----
Q 023110           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVLE----  140 (287)
Q Consensus        81 ~~~------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~-~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~----  140 (287)
                      +..            +.++.++++++.  +.++||++||..+|+. ....+++|+.+..|.+.| .+|..+|.+++    
T Consensus        73 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~  152 (267)
T 3rft_A           73 GISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFD  152 (267)
T ss_dssp             SCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            873            445778888876  7789999999999974 344578888888887777 99999998874    


Q ss_pred             hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcc
Q 023110          141 SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (287)
Q Consensus       141 ~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~  220 (287)
                      +.+++++++||+.++|+.                      .++...+++++++|+++++..+++.+...+.++++.+++.
T Consensus       153 ~~g~~~~~vr~~~v~~~~----------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~  210 (267)
T 3rft_A          153 KFGQETALVRIGSCTPEP----------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASAND  210 (267)
T ss_dssp             HHCCCEEEEEECBCSSSC----------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCT
T ss_pred             HhCCeEEEEEeecccCCC----------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCC
Confidence            568999999999999872                      2334556789999999999999988775566888888888


Q ss_pred             cCHHHHHHHHHHHhCCC
Q 023110          221 VTFDGLARACAKAAGFP  237 (287)
Q Consensus       221 ~s~~e~~~~i~~~~g~~  237 (287)
                      .++.++...  +.+|..
T Consensus       211 ~~~~~~~~~--~~~g~~  225 (267)
T 3rft_A          211 AGWWDNSHL--GFLGWK  225 (267)
T ss_dssp             TCCBCCGGG--GGGCCC
T ss_pred             CCcccChhH--HHCCCC
Confidence            888776443  566653

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.94  E-value=1.5e-25  Score=176.04  Aligned_cols=184  Identities=18%  Similarity=0.261  Sum_probs=143.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||++|++++++|+++|++|++++|++..... +.          ..+++++.+|+.|++++.++++  ++|+|||++
T Consensus         9 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~----------~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a   75 (206)
T 1hdo_A            9 FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-EG----------PRPAHVVVGDVLQAADVDKTVA--GQDAVIVLL   75 (206)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-SS----------CCCSEEEESCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             EcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-cc----------CCceEEEEecCCCHHHHHHHHc--CCCEEEECc
Confidence            6999999999999999999999999998765321 11          2578999999999999999998  899999999


Q ss_pred             CCCc---------ccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhhCCCcEEE
Q 023110           81 GREA---------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTS  148 (287)
Q Consensus        81 ~~~~---------~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~~~~~~i  148 (287)
                      +...         .++.++++++.  ++++||++||..+|+.....+.       +...| .+|..+|.++++.++++++
T Consensus        76 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~-------~~~~y~~~K~~~e~~~~~~~i~~~~  148 (206)
T 1hdo_A           76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPP-------RLQAVTDDHIRMHKVLRESGLKYVA  148 (206)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCG-------GGHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred             cCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccc-------cchhHHHHHHHHHHHHHhCCCCEEE
Confidence            8643         35788888877  7889999999999875432211       33445 9999999999999999999


Q ss_pred             EecCeeecCCCC-CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCc
Q 023110          149 LRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK  219 (287)
Q Consensus       149 lR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~  219 (287)
                      +||+.+ +++.. ..+..            .+.+.+.  .++++++|+|++++.+++++...++.|+++++.
T Consensus       149 lrp~~~-~~~~~~~~~~~------------~~~~~~~--~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~  205 (206)
T 1hdo_A          149 VMPPHI-GDQPLTGAYTV------------TLDGRGP--SRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY  205 (206)
T ss_dssp             ECCSEE-ECCCCCSCCEE------------ESSSCSS--CSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred             EeCCcc-cCCCCCcceEe------------cccCCCC--CCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence            999997 43321 11110            0001111  489999999999999998876678899999874

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.92  E-value=3.4e-26  Score=180.90  Aligned_cols=183  Identities=17%  Similarity=0.134  Sum_probs=141.6

Q ss_pred             CCcccchHHHHHHHHHHcCC--eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+|++|++++++|+++|+  +|++++|++..     .          ..+++++.+|+.|.+++.+++    +|+|||
T Consensus        11 tGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----~----------~~~~~~~~~D~~~~~~~~~~~----~d~vi~   71 (215)
T 2a35_A           11 AGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----E----------HPRLDNPVGPLAELLPQLDGS----IDTAFC   71 (215)
T ss_dssp             ECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----C----------CTTEECCBSCHHHHGGGCCSC----CSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----c----------CCCceEEeccccCHHHHHHhh----hcEEEE
Confidence            69999999999999999998  99999998764     1          257888899998888777666    899999


Q ss_pred             cCCCC--------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhC
Q 023110           79 INGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESK  142 (287)
Q Consensus        79 ~a~~~--------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~  142 (287)
                      +++..              ..++.++++++.  +.++||++||..+|+.            .+..|..+|..+|.+++..
T Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------------~~~~y~~sK~~~e~~~~~~  139 (215)
T 2a35_A           72 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK------------SSIFYNRVKGELEQALQEQ  139 (215)
T ss_dssp             CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------CSSHHHHHHHHHHHHHTTS
T ss_pred             CeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC------------CccHHHHHHHHHHHHHHHc
Confidence            99874              335677888876  7789999999998752            1122449999999999999


Q ss_pred             CCc-EEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCccc
Q 023110          143 GVN-WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (287)
Q Consensus       143 ~~~-~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~  221 (287)
                      +++ ++++||+.+|||.....+...+    . +...++ .+  ..++++|++|+|++++.+++++.  ++.||+++++.+
T Consensus       140 ~~~~~~~vrp~~v~g~~~~~~~~~~~----~-~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~~~~~  209 (215)
T 2a35_A          140 GWPQLTIARPSLLFGPREEFRLAEIL----A-APIARI-LP--GKYHGIEACDLARALWRLALEEG--KGVRFVESDELR  209 (215)
T ss_dssp             CCSEEEEEECCSEESTTSCEEGGGGT----T-CCCC-------CHHHHHHHHHHHHHHHHHHTCCC--SEEEEEEHHHHH
T ss_pred             CCCeEEEEeCceeeCCCCcchHHHHH----H-Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcCC--CCceEEcHHHHH
Confidence            999 9999999999997543222221    1 111222 22  26789999999999999998875  679999998766


Q ss_pred             CHH
Q 023110          222 TFD  224 (287)
Q Consensus       222 s~~  224 (287)
                      ++.
T Consensus       210 ~~~  212 (215)
T 2a35_A          210 KLG  212 (215)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            553

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=9.5e-24  Score=169.30  Aligned_cols=192  Identities=17%  Similarity=0.190  Sum_probs=139.2

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||+|+||++++++|+++| ++|++++|++.......           ..+++++.+|+.|++++.++++  ++|+|||+
T Consensus        29 tGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~D~vv~~   95 (236)
T 3qvo_A           29 LGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-----------PTNSQIIMGDVLNHAALKQAMQ--GQDIVYAN   95 (236)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-----------CTTEEEEECCTTCHHHHHHHHT--TCSEEEEE
T ss_pred             EeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-----------cCCcEEEEecCCCHHHHHHHhc--CCCEEEEc
Confidence            7999999999999999999 99999999977633222           2578999999999999999999  89999999


Q ss_pred             CCCCc--ccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCCCcEEEEecCeee
Q 023110           80 NGREA--DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIY  155 (287)
Q Consensus        80 a~~~~--~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~ilR~~~v~  155 (287)
                      ++...  ..+++++++++  ++++||++||..+|+.......... ...+..+...+..+|..++..+++++++|||.++
T Consensus        96 a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~  174 (236)
T 3qvo_A           96 LTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWN-NAVIGEPLKPFRRAADAIEASGLEYTILRPAWLT  174 (236)
T ss_dssp             CCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC-----------------CGGGHHHHHHHHHHHTSCSEEEEEEECEEE
T ss_pred             CCCCchhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccch-hhcccchHHHHHHHHHHHHHCCCCEEEEeCCccc
Confidence            98643  34678888876  7889999999999986543221111 1122234456677788888899999999999999


Q ss_pred             cCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCc-cCCceEEecCCcc
Q 023110          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGEKY  220 (287)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~i~~~~~  220 (287)
                      ++.....             .... ........+++.+|+|++++.++..+. ..++.|+++++..
T Consensus       175 ~~~~~~~-------------~~~~-~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~  226 (236)
T 3qvo_A          175 DEDIIDY-------------ELTS-RNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT  226 (236)
T ss_dssp             CCSCCCC-------------EEEC-TTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred             CCCCcce-------------EEec-cCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence            8742210             0000 010112358999999999999998866 4688999998763

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.91  E-value=5.3e-24  Score=171.43  Aligned_cols=186  Identities=18%  Similarity=0.175  Sum_probs=140.3

Q ss_pred             CCcccchHHHHHHHHHHcCC--eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+|+||++++++|+++|+  +|++++|++.......           ..++.++.+|+.|.+++.++++  ++|+|||
T Consensus        24 tGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   90 (242)
T 2bka_A           24 LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----------YKNVNQEVVDFEKLDDYASAFQ--GHDVGFC   90 (242)
T ss_dssp             ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----------GGGCEEEECCGGGGGGGGGGGS--SCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-----------cCCceEEecCcCCHHHHHHHhc--CCCEEEE
Confidence            79999999999999999999  9999999876522111           2468899999999999999998  8999999


Q ss_pred             cCCCC-------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCC
Q 023110           79 INGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKG  143 (287)
Q Consensus        79 ~a~~~-------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~  143 (287)
                      +++..             ..++.++++++.  +.++||++||..+|+.            .+..|..+|..+|.+++..+
T Consensus        91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~------------~~~~Y~~sK~~~e~~~~~~~  158 (242)
T 2bka_A           91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS------------SNFLYLQVKGEVEAKVEELK  158 (242)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------CSSHHHHHHHHHHHHHHTTC
T ss_pred             CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC------------CcchHHHHHHHHHHHHHhcC
Confidence            99974             345677888876  6789999999988752            11224499999999999989


Q ss_pred             C-cEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecC
Q 023110          144 V-NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  217 (287)
Q Consensus       144 ~-~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~  217 (287)
                      + +++++|||.+|||.........+........+. ..    ....+++++|+|++++.++.++.. .+.|++.+
T Consensus       159 ~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~dva~~~~~~~~~~~~-~~~~~~~~  227 (242)
T 2bka_A          159 FDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPD-SW----ASGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN  227 (242)
T ss_dssp             CSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCT-TG----GGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred             CCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCc-cc----cCCcccCHHHHHHHHHHHHhCccc-cCeeEeeH
Confidence            9 599999999999964332333333333322221 11    123589999999999999987663 34666554

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.90  E-value=2.6e-23  Score=165.05  Aligned_cols=193  Identities=18%  Similarity=0.217  Sum_probs=141.2

Q ss_pred             CCcccchHHHHHHHHH-HcCCeEEEEEcCCc-cccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKA-PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+|+||++++++|+ ++|++|++++|++. .... +        .....+++++.+|+.|.+++.++++  ++|+|||
T Consensus        11 tGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~-~--------~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vv~   79 (221)
T 3r6d_A           11 LGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP-E--------IIDHERVTVIEGSFQNPGXLEQAVT--NAEVVFV   79 (221)
T ss_dssp             ESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCH-H--------HHTSTTEEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred             EeCCcHHHHHHHHHHHhcCCceEEEEecCccccchh-h--------ccCCCceEEEECCCCCHHHHHHHHc--CCCEEEE
Confidence            7999999999999999 89999999999876 4211 1        0013689999999999999999998  9999999


Q ss_pred             cCCC-CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCC-cchhhhHHHHHHhhhCCCcEEEEecCee
Q 023110           79 INGR-EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRHKGKLNTESVLESKGVNWTSLRPVYI  154 (287)
Q Consensus        79 ~a~~-~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~-~~~~~k~~~E~~~~~~~~~~~ilR~~~v  154 (287)
                      +++. +.. +++++++++  +.++||++||..+|+..... ..+....... .|..+|..+|.++++.+++++++|||.+
T Consensus        80 ~ag~~n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~-~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg~v  157 (221)
T 3r6d_A           80 GAMESGSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVA-LEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWL  157 (221)
T ss_dssp             SCCCCHHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH-HHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEEECEE
T ss_pred             cCCCCChh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcc-cccccccccccHHHHHHHHHHHHHHhCCCCEEEEechhh
Confidence            9987 344 888999887  77899999999987643211 0000000111 3458999999999999999999999999


Q ss_pred             ecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH--cCCc-cCCceEEecCCc
Q 023110          155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL--GNEK-ASRQVFNISGEK  219 (287)
Q Consensus       155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~--~~~~-~~~~~~~i~~~~  219 (287)
                      +++.....+.            ... ........+++.+|+|++++.++  ..+. ..++.+.++++.
T Consensus       158 ~~~~~~~~~~------------~~~-~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          158 YNDPEXTDYE------------LIP-EGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             ECCTTCCCCE------------EEC-TTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred             cCCCCCccee------------ecc-CCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence            9973211110            000 00011124899999999999999  7654 356778887654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.84  E-value=8.2e-22  Score=159.72  Aligned_cols=200  Identities=19%  Similarity=0.153  Sum_probs=136.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC--CccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--~~d~vi~   78 (287)
                      |||+|+||++++++|+++|++|++++|+.....               .   .+.+|+.+.+++.++++..  ++|+|||
T Consensus         7 tGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------~---~~~~D~~~~~~~~~~~~~~~~~~d~vi~   68 (255)
T 2dkn_A            7 TGSASGIGAALKELLARAGHTVIGIDRGQADIE---------------A---DLSTPGGRETAVAAVLDRCGGVLDGLVC   68 (255)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------C---CTTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc---------------c---cccCCcccHHHHHHHHHHcCCCccEEEE
Confidence            799999999999999999999999999876521               1   1568999988888888643  7999999


Q ss_pred             cCCCCc-------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCC-C-------CCCC-------CCC
Q 023110           79 INGREA-------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLP-H-------CETD-------TVD  124 (287)
Q Consensus        79 ~a~~~~-------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~-~-------~e~~-------~~~  124 (287)
                      +|+...             .++.++++++    .  +.+++|++||..+|+.....+ .       +|+.       ...
T Consensus        69 ~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (255)
T 2dkn_A           69 CAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQ  148 (255)
T ss_dssp             CCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCC
Confidence            998743             2344555543    2  458999999999886431100 0       0000       012


Q ss_pred             CCcch-hhhHHHHHHhhh-------CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          125 PKSRH-KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       125 ~~~~~-~~k~~~E~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      +...| .+|..+|.+++.       .+++++++|||.++|+..     ..++.....+....... + ....+++++|+|
T Consensus       149 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~-----~~~~~~~~~~~~~~~~~-~-~~~~~~~~~dva  221 (255)
T 2dkn_A          149 THLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL-----QASKADPRYGESTRRFV-A-PLGRGSEPREVA  221 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH-----HHHHHCTTTHHHHHSCC-C-TTSSCBCHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh-----hhcccchhhHHHHHHHH-H-HhcCCCCHHHHH
Confidence            33345 999999887642       589999999999999731     11111000000011111 1 234689999999


Q ss_pred             HHHHHHHcCC--ccCCceEEecCCcccCHHH
Q 023110          197 RAFVQVLGNE--KASRQVFNISGEKYVTFDG  225 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~s~~e  225 (287)
                      ++++.++..+  ...|+.|+++++..++++|
T Consensus       222 ~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          222 EAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             HHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence            9999999765  3468899999998776654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.84  E-value=1.9e-20  Score=153.91  Aligned_cols=212  Identities=17%  Similarity=0.147  Sum_probs=146.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..        .+....++++.+|+.|.+++.++++..     ++|+
T Consensus        11 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A           11 TGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV--------AAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH--------HHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999999876532111        111357899999999999998888743     7899


Q ss_pred             EEecCCCC--------------------ccc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+||..                    +.+    ++.+++.++  +..++|++||...+..           ..+...|
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y  151 (281)
T 3m1a_A           83 LVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS-----------FAGFSAY  151 (281)
T ss_dssp             EEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------CTTCHHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC-----------CCCchHH
Confidence            99999863                    112    444555554  6789999999776422           2233445


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC------ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                       .+|..+|.+.+       ..++++++++||.+.++....      .....+.........+..   ......+.+++|+
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dv  228 (281)
T 3m1a_A          152 SATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQ---GSDGSQPGDPAKA  228 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHH---C-----CBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHh---hccCCCCCCHHHH
Confidence             99999887763       268999999999998874210      111111111111111111   1123467789999


Q ss_pred             HHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHHHHhC
Q 023110          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG  235 (287)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g  235 (287)
                      |++++.+++++. .+..|+++++......+....+.+.++
T Consensus       229 a~a~~~~~~~~~-~~~~~~l~s~~~~~i~g~~~~i~~~~~  267 (281)
T 3m1a_A          229 AAAIRLALDTEK-TPLRLALGGDAVDFLTGHLDSVRAELT  267 (281)
T ss_dssp             HHHHHHHHHSSS-CCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCC-CCeEEecCchHHHHHHHHHHHHHHHHH
Confidence            999999998876 467999999877777777777766554

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.83  E-value=1.3e-20  Score=154.75  Aligned_cols=211  Identities=15%  Similarity=0.137  Sum_probs=146.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.........     .+. ...++.++.+|+.|.+++.++++..     ++|+
T Consensus        22 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   95 (278)
T 2bgk_A           22 TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN-----NIG-SPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI   95 (278)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHH-----HhC-CCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997644211100     000 0126899999999999998887642     7999


Q ss_pred             EEecCCCCc----------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           76 VYDINGREA----------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~----------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      |||+||...                      .++.+++++    +.  +..++|++||...|....          .+..
T Consensus        96 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~  165 (278)
T 2bgk_A           96 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE----------GVSH  165 (278)
T ss_dssp             EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------TSCH
T ss_pred             EEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC----------CCCc
Confidence            999998531                      112233333    22  567999999988764321          1223


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh--hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      .| .+|...|.+++       ..+++++++|||.++++......  ............+.       ....+++++|+|+
T Consensus       166 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~  238 (278)
T 2bgk_A          166 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN-------LKGTLLRAEDVAD  238 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS-------SCSCCCCHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccc-------cccccCCHHHHHH
Confidence            34 99999887763       25899999999999998632211  12222222221111       1235789999999


Q ss_pred             HHHHHHcCC--ccCCceEEecCCcccCHHHHHHHHHHHh
Q 023110          198 AFVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKAA  234 (287)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~~~~s~~e~~~~i~~~~  234 (287)
                      +++.++...  ...|+.|++.++..+++.|+++.+.+.+
T Consensus       239 ~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          239 AVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             HHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            999998653  2368899999999999999999876543

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.82  E-value=8.1e-20  Score=148.02  Aligned_cols=198  Identities=13%  Similarity=0.128  Sum_probs=138.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+........     ..+.....++.++.+|+.|++++.++++..     ++|+
T Consensus        17 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   91 (255)
T 1fmc_A           17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHVV-----DEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI   91 (255)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865421111     111112357889999999999998887632     7999


Q ss_pred             EEecCCCCc-------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-
Q 023110           76 VYDINGREA-------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~-------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (287)
                      |||+|+...                   .++.++++++    +  +..++|++||...+...           .+...| 
T Consensus        92 vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~  160 (255)
T 1fmc_A           92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN-----------INMTSYA  160 (255)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----------TTCHHHH
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-----------CCCcccH
Confidence            999998632                   1233344443    2  56899999998775421           223345 


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...|.+++       ..++++.++|||.++++.......+.+......+.++         ..+++++|+|++++.+
T Consensus       161 ~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l  231 (255)
T 1fmc_A          161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------RRLGQPQDIANAALFL  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS---------CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCc---------ccCCCHHHHHHHHHHH
Confidence            89999887763       2489999999999998742111223333344333322         2367899999999999


Q ss_pred             HcCCc--cCCceEEecCCcccCH
Q 023110          203 LGNEK--ASRQVFNISGEKYVTF  223 (287)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~~~s~  223 (287)
                      +....  ..|+.|+++++...|+
T Consensus       232 ~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          232 CSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             HSGGGTTCCSCEEEESTTSCCCC
T ss_pred             hCCccccCCCcEEEECCceeccC
Confidence            86543  2578999999887764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.81  E-value=5.4e-20  Score=148.11  Aligned_cols=192  Identities=15%  Similarity=0.151  Sum_probs=134.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|+||++++++|+++|++|++++|+.....+.         .....+++++.+|+.|.+++.++++.. ++|+|||+
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 1cyd_A           13 TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSL---------AKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence            79999999999999999999999999986542111         111246788899999999999998743 48999999


Q ss_pred             CCCC--------------------cccHHHHHHhC----C--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcch-hh
Q 023110           80 NGRE--------------------ADEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (287)
Q Consensus        80 a~~~--------------------~~~~~~ll~~~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (287)
                      ||..                    +.++.++++++    .  + ..+||++||...|...           .+...| .+
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~s  152 (244)
T 1cyd_A           84 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF-----------PNLITYSST  152 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------TTBHHHHHH
T ss_pred             CcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC-----------CCcchhHHH
Confidence            9853                    12233344443    2  3 5799999998876431           122334 89


Q ss_pred             hHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      |...|.+++       ..++++.++|||.++++.... .....++..+..+.+         ...+++++|+|++++.++
T Consensus       153 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~  223 (244)
T 1cyd_A          153 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP---------LRKFAEVEDVVNSILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST---------TSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCC---------ccCCCCHHHHHHHHHHHh
Confidence            999888764       258999999999999874210 011223233333222         246899999999999999


Q ss_pred             cCCc--cCCceEEecCCccc
Q 023110          204 GNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       204 ~~~~--~~~~~~~i~~~~~~  221 (287)
                      ..+.  ..|+.+++.++...
T Consensus       224 ~~~~~~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          224 SDRSASTSGGGILVDAGYLA  243 (244)
T ss_dssp             SGGGTTCCSSEEEESTTGGG
T ss_pred             CchhhcccCCEEEECCCccC
Confidence            7543  35788999887643

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.79  E-value=1.8e-19  Score=149.64  Aligned_cols=210  Identities=17%  Similarity=0.188  Sum_probs=142.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh-cCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|+++|++|++++|+.........     .+... ..++.++.+|+.|.+++.++++..     ++|
T Consensus        32 TGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  106 (302)
T 1w6u_A           32 TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAE-----QISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN  106 (302)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999998654221110     11111 356899999999999998887743     579


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHh----C--C-CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           75 VVYDINGREA--------------------DEVEPILDA----L--P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~----~--~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      +|||+||...                    .++.+++++    +  + +..++|++||...+...           .+..
T Consensus       107 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~  175 (302)
T 1w6u_A          107 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS-----------GFVV  175 (302)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC-----------TTCH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC-----------CCcc
Confidence            9999998531                    122233333    2  2 45799999998765321           1233


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhH--HHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE--WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      .| .+|..+|.+.+       ..+++++++|||.+++++.......  ..........+.         ..+++++|+|+
T Consensus       176 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva~  246 (302)
T 1w6u_A          176 PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC---------GRLGTVEELAN  246 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT---------SSCBCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCc---------CCCCCHHHHHH
Confidence            34 89999887763       2689999999999998732111100  111222222221         13678999999


Q ss_pred             HHHHHHcCCc--cCCceEEecCCcccCHHHHHHHHHHHhC
Q 023110          198 AFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKAAG  235 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~s~~e~~~~i~~~~g  235 (287)
                      +++.++....  ..|+.|++.++..++..++++.+.+..|
T Consensus       247 ~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          247 LAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred             HHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence            9999986533  2688999999988888888777766554

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.78  E-value=1.2e-17  Score=135.45  Aligned_cols=186  Identities=16%  Similarity=0.170  Sum_probs=134.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....              ...+.++.+|+.|++++.++++..     ++|+
T Consensus        34 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   99 (260)
T 3un1_A           34 TGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA--------------DPDIHTVAGDISKPETADRIVREGIERFGRIDS   99 (260)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS--------------STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc--------------cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999865421              246889999999999988888743     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++..+++++    .  +..++|++||...+....         ..+...|
T Consensus       100 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------~~~~~~Y  170 (260)
T 3un1_A          100 LVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMV---------GMPSALA  170 (260)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBT---------TCCCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCC---------CCccHHH
Confidence            999998731                    2233344443    2  567999999977643211         1223344


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                       .+|...+.+.+       ..++++.+++||.+++|......    ........++         ..+.+++|+|++++.
T Consensus       171 ~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~p~---------~r~~~~~dva~av~~  237 (260)
T 3un1_A          171 SLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET----HSTLAGLHPV---------GRMGEIRDVVDAVLY  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG----HHHHHTTSTT---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH----HHHHhccCCC---------CCCcCHHHHHHHHHH
Confidence             88998887663       24899999999999998532211    1222222222         245679999999999


Q ss_pred             HHcCCccCCceEEecCCcccC
Q 023110          202 VLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       202 ~~~~~~~~~~~~~i~~~~~~s  222 (287)
                      +.+.....|+.+++.++...+
T Consensus       238 L~~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          238 LEHAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             HHHCTTCCSCEEEESTTGGGC
T ss_pred             hcccCCCCCcEEEECCCeecc
Confidence            966655678999999987654

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.78  E-value=2.4e-18  Score=139.75  Aligned_cols=196  Identities=13%  Similarity=0.196  Sum_probs=133.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+........     ..+.....++.++.+|+.|.+++.++++..     ++|+
T Consensus        19 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   93 (260)
T 3awd_A           19 TGGAQNIGLACVTALAEAGARVIIADLDEAMATKAV-----EDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDI   93 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     111111346899999999999988887632     6999


Q ss_pred             EEecCCCCc---------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA---------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||+||...                     .++.++++++    .  +..++|++||...+...         +..+...
T Consensus        94 vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~~~~~~~  164 (260)
T 3awd_A           94 LVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN---------RPQQQAA  164 (260)
T ss_dssp             EEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSCCHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC---------CCCCccc
Confidence            999998532                     1123334432    2  56799999997654321         1112234


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCC-CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      | .+|...|.+++       ..+++++++|||.++++... ......+......+.+.         ..+++.+|+|+++
T Consensus       165 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~  235 (260)
T 3awd_A          165 YNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPM---------GRVGQPDEVASVV  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTT---------SSCBCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCc---------CCCCCHHHHHHHH
Confidence            4 99999887764       26899999999999998532 11112233333333221         2467899999999


Q ss_pred             HHHHcCC--ccCCceEEecCCc
Q 023110          200 VQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      +.++...  ...|+.|++.++.
T Consensus       236 ~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          236 QFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCchhccCCCcEEEECCce
Confidence            9998653  2367899999875

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.77  E-value=1.4e-18  Score=139.84  Aligned_cols=192  Identities=14%  Similarity=0.153  Sum_probs=132.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|+||++++++|+++|++|++++|+........         ....+++++.+|+.|.+++.++++.. ++|+|||+
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 3d3w_A           13 TGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLV---------RECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---------HHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---------HHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence            799999999999999999999999999865421111         11235778899999999999998743 58999999


Q ss_pred             CCCCc--------------------ccHHHHHHh----CC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcch-hh
Q 023110           80 NGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (287)
Q Consensus        80 a~~~~--------------------~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (287)
                      ||...                    .++..++++    +.  + ..++|++||...+..           ..+...| .+
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~s  152 (244)
T 3d3w_A           84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----------VTNHSVYCST  152 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------CTTBHHHHHH
T ss_pred             CccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC-----------CCCCchHHHH
Confidence            98632                    112223333    22  3 678999999876532           1223345 99


Q ss_pred             hHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      |..+|.+++       ..++++.++|||.++++..... .............+         ...+++++|+|++++.++
T Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~  223 (244)
T 3d3w_A          153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIP---------LGKFAEVEHVVNAILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCT---------TCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCC---------CCCCcCHHHHHHHHHHHc
Confidence            999988763       2579999999999998742100 00111122222211         135788999999999999


Q ss_pred             cCCc--cCCceEEecCCccc
Q 023110          204 GNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       204 ~~~~--~~~~~~~i~~~~~~  221 (287)
                      ....  ..|+.|++.++...
T Consensus       224 ~~~~~~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          224 SDRSGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CccccCCCCCEEEECCCccC
Confidence            7542  36889999987643

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.77  E-value=3.9e-18  Score=137.00  Aligned_cols=185  Identities=16%  Similarity=0.183  Sum_probs=131.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC----CccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~----~~d~v   76 (287)
                      |||+|+||++++++|+++|++|++++|+...                 ..+.++.+|+.|.+++.+++++.    ++|++
T Consensus         8 tGasggiG~~la~~l~~~G~~V~~~~r~~~~-----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l   70 (242)
T 1uay_A            8 TGGASGLGRAAALALKARGYRVVVLDLRREG-----------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   70 (242)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEccCccc-----------------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence            7999999999999999999999999998651                 34578999999999998888643    78999


Q ss_pred             EecCCCCc------------------------ccHHHHHHhC----CC-----C---ccEEEEecceeeccCCCCCCCCC
Q 023110           77 YDINGREA------------------------DEVEPILDAL----PN-----L---EQFIYCSSAGVYLKSDLLPHCET  120 (287)
Q Consensus        77 i~~a~~~~------------------------~~~~~ll~~~----~~-----~---~~~i~~Ss~~v~~~~~~~~~~e~  120 (287)
                      ||+++...                        .++.++++++    ..     .   .++|++||...+....       
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------  143 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI-------  143 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-------
T ss_pred             EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC-------
Confidence            99998631                        1123344432    21     1   2899999988765321       


Q ss_pred             CCCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeH
Q 023110          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (287)
Q Consensus       121 ~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (287)
                          +...| .+|...|.+.+       ..+++++++|||.++++.... ....+...+....++  .      ..++++
T Consensus       144 ----~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~--~------~~~~~~  210 (242)
T 1uay_A          144 ----GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVPF--P------PRLGRP  210 (242)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-SCHHHHHHHHTTCCS--S------CSCCCH
T ss_pred             ----CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc-cchhHHHHHHhhCCC--c------ccCCCH
Confidence                22344 89988877653       348999999999999874211 112222333332221  0      236789


Q ss_pred             HHHHHHHHHHHcCCccCCceEEecCCcccC
Q 023110          193 KDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       193 ~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (287)
                      +|+|++++.++......|+.|++.++..++
T Consensus       211 ~dva~~~~~l~~~~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          211 EEYAALVLHILENPMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHhcCCCCCCcEEEEcCCeecC
Confidence            999999999998755578899999886553

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.77  E-value=8e-18  Score=135.84  Aligned_cols=194  Identities=14%  Similarity=0.243  Sum_probs=132.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhh-hhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|+++|++|++++|+.........     .+ .....++.++.+|+.|.+++.++++..     ++|
T Consensus         8 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (250)
T 2cfc_A            8 TGASSGNGLAIATRFLARGDRVAALDLSAETLEETAR-----THWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAID   82 (250)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999998654221100     00 111346889999999999988887642     799


Q ss_pred             EEEecCCCCcc-----------------------cH----HHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           75 VVYDINGREAD-----------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        75 ~vi~~a~~~~~-----------------------~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      +|||+||....                       ++    +.+++.+.  +..++|++||...+...           .+
T Consensus        83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~  151 (250)
T 2cfc_A           83 VLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF-----------PG  151 (250)
T ss_dssp             EEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TT
T ss_pred             EEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-----------CC
Confidence            99999986311                       11    23344443  66899999998765321           12


Q ss_pred             Ccch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ...| .+|...|.+.+       ..+++++++|||.++++...... ...+........+.         ..+.+.+|+|
T Consensus       152 ~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva  222 (250)
T 2cfc_A          152 RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQ---------KEIGTAAQVA  222 (250)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTT---------CSCBCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCC---------CCCcCHHHHH
Confidence            2334 89999887663       24899999999999998532101 11222333322221         2367899999


Q ss_pred             HHHHHHHcCCc--cCCceEEecCCc
Q 023110          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++++.++..+.  ..|+.+++.++.
T Consensus       223 ~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          223 DAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             HHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             HHHHHHcCchhhcccCCEEEECCce
Confidence            99999987643  358899998875

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.77  E-value=6.7e-18  Score=138.51  Aligned_cols=209  Identities=15%  Similarity=0.153  Sum_probs=130.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhh---hhhcCCeEEEEecCCChHHHHhhhhcC-----C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF---AEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~   72 (287)
                      |||+|+||++++++|+++|++|++++|+.....+...     .+   .....++.++.+|+.|++++.++++..     +
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (278)
T 1spx_A           12 TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQ-----QILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK   86 (278)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999998654221100     00   000246889999999999988887643     7


Q ss_pred             ccEEEecCCCCcc------------------------cHHHHHHh----CC-CCccEEEEeccee-eccCCCCCCCCCCC
Q 023110           73 FDVVYDINGREAD------------------------EVEPILDA----LP-NLEQFIYCSSAGV-YLKSDLLPHCETDT  122 (287)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~~~~ll~~----~~-~~~~~i~~Ss~~v-~~~~~~~~~~e~~~  122 (287)
                      +|++||+||....                        ++.+++++    ++ ...++|++||... +...          
T Consensus        87 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  156 (278)
T 1spx_A           87 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHAT----------  156 (278)
T ss_dssp             CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCC----------
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCC----------
Confidence            9999999986311                        11223333    32 2379999999765 4321          


Q ss_pred             CCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh--hHHH------HHHHHcCCCccCCCCCCce
Q 023110          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWF------FHRLKAGRPIPIPGSGIQV  186 (287)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~~~  186 (287)
                       .+...| .+|..++.+.+       ..++++++++||.+.++......  ....      ........+.         
T Consensus       157 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------  226 (278)
T 1spx_A          157 -PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA---------  226 (278)
T ss_dssp             -TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT---------
T ss_pred             -CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCC---------
Confidence             122234 89998887663       35899999999999987522110  0000      1111111111         


Q ss_pred             eeeeeHHHHHHHHHHHHcCCc---cCCceEEecCCcccCHHHHHHHHHHHh
Q 023110          187 TQLGHVKDLARAFVQVLGNEK---ASRQVFNISGEKYVTFDGLARACAKAA  234 (287)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~~---~~~~~~~i~~~~~~s~~e~~~~i~~~~  234 (287)
                      ..+.+.+|+|++++.++..+.   ..|+.+++.++..+++.++++.+.+.+
T Consensus       227 ~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          227 GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             cCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            136789999999999986532   368899999999999999999988754

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.77  E-value=1.5e-18  Score=142.56  Aligned_cols=212  Identities=18%  Similarity=0.158  Sum_probs=146.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhc---CCeEEEEecCCChHHHHhhhhcC-----C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS---SKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~D~~d~~~~~~~~~~~-----~   72 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+...     .+....   ..+.++.+|+.|++++.++++..     +
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   91 (281)
T 3svt_A           17 TGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQ-----ELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGR   91 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999998765321110     111111   26889999999999988888743     6


Q ss_pred             ccEEEecCCCC---------------------cccHHHHHHhCC------CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           73 FDVVYDINGRE---------------------ADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        73 ~d~vi~~a~~~---------------------~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      +|++||+||..                     +.++.++++++.      +..++|++||...+....           +
T Consensus        92 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~  160 (281)
T 3svt_A           92 LHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR-----------W  160 (281)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT-----------T
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC-----------C
Confidence            89999999961                     112333444322      445999999988763221           1


Q ss_pred             Ccch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ...| .+|...+.+.+       ..++++..++||.+.++..... .............++         ..+.+++|+|
T Consensus       161 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva  231 (281)
T 3svt_A          161 FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPL---------PRQGEVEDVA  231 (281)
T ss_dssp             CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSS---------SSCBCHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            2234 99999887763       3579999999999988742110 001122222222222         2345799999


Q ss_pred             HHHHHHHcCCc--cCCceEEecCCcccC-HHHHHHHHHHHhCCC
Q 023110          197 RAFVQVLGNEK--ASRQVFNISGEKYVT-FDGLARACAKAAGFP  237 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~s-~~e~~~~i~~~~g~~  237 (287)
                      ++++.++....  ..|+.+++.++..++ ..++.+.+.+.+|.+
T Consensus       232 ~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~  275 (281)
T 3svt_A          232 NMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRD  275 (281)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTT
T ss_pred             HHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCc
Confidence            99999987543  368999999998877 778899999888865

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.76  E-value=3.2e-18  Score=139.51  Aligned_cols=196  Identities=14%  Similarity=0.134  Sum_probs=121.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc------CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~------~~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+......+.++.+|+.|.+++.++++.      .++|
T Consensus        20 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   94 (266)
T 1xq1_A           20 TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL-----SKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   94 (266)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            799999999999999999999999999865422111     11111134688999999999988888753      3799


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +|||+||...                    .++.++++++    +  +..++|++||...+...           .+...
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~  163 (266)
T 1xq1_A           95 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA-----------SVGSI  163 (266)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------CCH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCC-----------CCCch
Confidence            9999998631                    1233455544    3  67899999998775421           11223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      | .+|...|.+.+       ..+++++++|||.++++.........+........         ....+++.+|+|++++
T Consensus       164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~  234 (266)
T 1xq1_A          164 YSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRK---------PLGRFGEPEEVSSLVA  234 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcC---------CCCCCcCHHHHHHHHH
Confidence            4 89998887663       24899999999999998532211111111111111         1124678999999999


Q ss_pred             HHHcCC--ccCCceEEecCCccc
Q 023110          201 QVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~~  221 (287)
                      .++...  ...|+.+++.++..+
T Consensus       235 ~l~~~~~~~~~G~~~~v~gG~~~  257 (266)
T 1xq1_A          235 FLCMPAASYITGQTICVDGGLTV  257 (266)
T ss_dssp             HHTSGGGTTCCSCEEECCCCEEE
T ss_pred             HHcCccccCccCcEEEEcCCccc
Confidence            998653  236889999998653

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.76  E-value=2e-18  Score=140.14  Aligned_cols=201  Identities=17%  Similarity=0.206  Sum_probs=135.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..        .+....+.++++|+.|++++.++++..     ++|+
T Consensus        14 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A           14 TGSARGIGRAFAEAYVREGATVAIADIDIERARQAA--------AEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865532111        112357889999999999988887643     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhCC------C-CccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||...                    .++.++++++.      + ..++|++||...+...           .+...
T Consensus        86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  154 (259)
T 4e6p_A           86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE-----------ALVAI  154 (259)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------TTBHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC-----------CCChH
Confidence            999999731                    12334444432      2 4689999998764321           12233


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcC---CCccCCCCCCceeeeeeHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      | .+|...+.+.+       ..++++..++||.+++|....  ...++......   +......+......+.+++|+|+
T Consensus       155 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~  232 (259)
T 4e6p_A          155 YCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG--VDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTG  232 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH--HHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh--hhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHH
Confidence            4 99999887763       348999999999999984211  11111111110   00011111122346788999999


Q ss_pred             HHHHHHcCCc--cCCceEEecCCcccC
Q 023110          198 AFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      +++.++....  ..|+.|++.++..+|
T Consensus       233 ~v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          233 MAIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             HHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHHhCCccCCCCCCEEEECcChhcC
Confidence            9999886432  368899999987654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.76  E-value=1.1e-17  Score=134.69  Aligned_cols=194  Identities=17%  Similarity=0.225  Sum_probs=135.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+.+.    ..+.....++.++++|+.|.+++.++++..     ++|+
T Consensus        10 TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   85 (246)
T 3osu_A           10 TGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVV----EEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDV   85 (246)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            8999999999999999999999999886543221111    111122357889999999999988888743     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++.++++++    .  +..++|++||...+...           .+...|
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  154 (246)
T 3osu_A           86 LVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN-----------PGQANY  154 (246)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTCHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-----------CCChHH
Confidence            999999731                    2233444443    2  56799999997765321           122334


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                       .+|...+.+.+       ..++++..++||.+.++.... +............++         ..+.+.+|+|++++.
T Consensus       155 ~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~~~dva~~v~~  224 (246)
T 3osu_A          155 VATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA-LSDELKEQMLTQIPL---------ARFGQDTDIANTVAF  224 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC-SCHHHHHHHHTTCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             99998887653       458999999999999885322 233444444444333         235668999999999


Q ss_pred             HHcCCc--cCCceEEecCCc
Q 023110          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++....  ..|+.+++.++.
T Consensus       225 l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          225 LASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             HTSGGGTTCCSCEEEESTTS
T ss_pred             HhCccccCCCCCEEEeCCCc
Confidence            886543  358899999875

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.76  E-value=3.7e-18  Score=138.09  Aligned_cols=195  Identities=15%  Similarity=0.213  Sum_probs=111.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..     ..+......+.++.+|+.|.+++.++++..     ++|+
T Consensus        15 TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   89 (253)
T 3qiv_A           15 TGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVA-----KQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDY   89 (253)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999866532111     111122356889999999999988887643     7999


Q ss_pred             EEecCCCC-----------------------ccc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCC
Q 023110           76 VYDINGRE-----------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        76 vi~~a~~~-----------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (287)
                      +||+||..                       +.+    ++.++..+.  +..++|++||...|..             ..
T Consensus        90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------~~  156 (253)
T 3qiv_A           90 LVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY-------------SN  156 (253)
T ss_dssp             EEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------
T ss_pred             EEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC-------------Cc
Confidence            99999872                       011    233444443  5678999999887521             11


Q ss_pred             cchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      .|..+|...+.+.+       ..++++..++||.++++.........+...+.++.         ....+.+++|+|+++
T Consensus       157 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~  227 (253)
T 3qiv_A          157 YYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGL---------PLSRMGTPDDLVGMC  227 (253)
T ss_dssp             ---CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------------CCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccC---------CCCCCCCHHHHHHHH
Confidence            24488998887653       34799999999999988532211111222222221         123455689999999


Q ss_pred             HHHHcCCc--cCCceEEecCCcccC
Q 023110          200 VQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      +.++....  ..|+.|++.++..++
T Consensus       228 ~~l~s~~~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          228 LFLLSDEASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             HHHHSGGGTTCCSCEEEC-------
T ss_pred             HHHcCccccCCCCCEEEECCCeecC
Confidence            99986543  268999999987543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.76  E-value=3.5e-18  Score=133.47  Aligned_cols=162  Identities=12%  Similarity=0.110  Sum_probs=120.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|+||++++++|+ +|++|++++|+..                      .+.+|+.|++++.++++.. ++|+|||+
T Consensus         9 tGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~   65 (202)
T 3d7l_A            9 IGASGTLGSAVKERLE-KKAEVITAGRHSG----------------------DVTVDITNIDSIKKMYEQVGKVDAIVSA   65 (202)
T ss_dssp             ETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------------SEECCTTCHHHHHHHHHHHCCEEEEEEC
T ss_pred             EcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------------ceeeecCCHHHHHHHHHHhCCCCEEEEC
Confidence            7999999999999999 9999999999853                      2679999999999988742 48999999


Q ss_pred             CCCC--------------------cccHHHHHHhCC-C---CccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHH
Q 023110           80 NGRE--------------------ADEVEPILDALP-N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (287)
Q Consensus        80 a~~~--------------------~~~~~~ll~~~~-~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (287)
                      ||..                    ..++.++++++. .   ..++|++||...+..           ..+...| .+|..
T Consensus        66 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~~  134 (202)
T 3d7l_A           66 TGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDP-----------IVQGASAAMANGA  134 (202)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSC-----------CTTCHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCC-----------CCccHHHHHHHHH
Confidence            9853                    223456777765 2   369999999765421           1222344 99999


Q ss_pred             HHHHhhh------CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCcc
Q 023110          135 TESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       135 ~E~~~~~------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (287)
                      +|.+.+.      .+++++++|||.++++..          ....         ....+.+++++|+|++++.++... .
T Consensus       135 ~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~----------~~~~---------~~~~~~~~~~~dva~~~~~~~~~~-~  194 (202)
T 3d7l_A          135 VTAFAKSAAIEMPRGIRINTVSPNVLEESWD----------KLEP---------FFEGFLPVPAAKVARAFEKSVFGA-Q  194 (202)
T ss_dssp             HHHHHHHHTTSCSTTCEEEEEEECCBGGGHH----------HHGG---------GSTTCCCBCHHHHHHHHHHHHHSC-C
T ss_pred             HHHHHHHHHHHccCCeEEEEEecCccCCchh----------hhhh---------hccccCCCCHHHHHHHHHHhhhcc-c
Confidence            9987742      389999999999998731          0101         112356899999999999888543 3


Q ss_pred             CCceEEec
Q 023110          209 SRQVFNIS  216 (287)
Q Consensus       209 ~~~~~~i~  216 (287)
                      .|+.|++.
T Consensus       195 ~G~~~~vd  202 (202)
T 3d7l_A          195 TGESYQVY  202 (202)
T ss_dssp             CSCEEEEC
T ss_pred             cCceEecC
Confidence            67788863

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.75  E-value=2.8e-18  Score=139.12  Aligned_cols=194  Identities=19%  Similarity=0.229  Sum_probs=132.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcC-CccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|+++|++|++++|+ ........     ..+.....++.++.+|+.|++++.++++..     ++|
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (258)
T 3afn_B           13 TGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETI-----ASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGID   87 (258)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHH-----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999998 44321111     111111346889999999999998888643     799


Q ss_pred             EEEecCCC-Cc--------------------ccHHHHHHh----CC--C--C---ccEEEEecceeeccCCCCCCCCCCC
Q 023110           75 VVYDINGR-EA--------------------DEVEPILDA----LP--N--L---EQFIYCSSAGVYLKSDLLPHCETDT  122 (287)
Q Consensus        75 ~vi~~a~~-~~--------------------~~~~~ll~~----~~--~--~---~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (287)
                      +|||+||. ..                    .++..++++    +.  +  .   .++|++||...+..          +
T Consensus        88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~  157 (258)
T 3afn_B           88 VLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG----------G  157 (258)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC----------C
T ss_pred             EEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC----------C
Confidence            99999986 21                    112223332    22  2  2   78999999776531          1


Q ss_pred             CCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHH
Q 023110          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      ..+...| .+|...|.+.+       ..+++++++|||.++++.... ....+...+..+.+.         ..+++++|
T Consensus       158 ~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~d  227 (258)
T 3afn_B          158 GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD-KTQDVRDRISNGIPM---------GRFGTAEE  227 (258)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT-CCHHHHHHHHTTCTT---------CSCBCGGG
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc-cCHHHHHHHhccCCC---------CcCCCHHH
Confidence            1123344 99999887763       248999999999999985322 122333333333221         25788999


Q ss_pred             HHHHHHHHHcCCc---cCCceEEecCCc
Q 023110          195 LARAFVQVLGNEK---ASRQVFNISGEK  219 (287)
Q Consensus       195 ~a~~~~~~~~~~~---~~~~~~~i~~~~  219 (287)
                      +|++++.++....   ..|+.|++.++.
T Consensus       228 va~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          228 MAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             THHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             HHHHHHHHhCcchhccccCCEEeECCCc
Confidence            9999999987542   258899999875

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.75  E-value=3.3e-18  Score=138.23  Aligned_cols=194  Identities=19%  Similarity=0.186  Sum_probs=131.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.........     .+.. ..++.++.+|+.|.+++.++++..     ++|+
T Consensus        12 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (251)
T 1zk4_A           12 TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAK-----SVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST   85 (251)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----Hhhc-cCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654211110     0000 147899999999999988888732     5999


Q ss_pred             EEecCCCCcc------------------------cHHHHHHhCC--CC-ccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD------------------------EVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~------------------------~~~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||+||....                        .++.+++.+.  +. .++|++||...+...           .+...
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~  154 (251)
T 1zk4_A           86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD-----------PSLGA  154 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC-----------CCCcc
Confidence            9999986311                        1234555554  44 799999998765321           12233


Q ss_pred             h-hhhHHHHHHhh---------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~-~~k~~~E~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      | .+|...|.+.+         ..+++++++|||.++++.... ........ ......       ....+++.+|+|++
T Consensus       155 Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~-~~~~~~-------~~~~~~~~~dva~~  225 (251)
T 1zk4_A          155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD-LPGAEEAM-SQRTKT-------PMGHIGEPNDIAYI  225 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT-STTHHHHH-TSTTTC-------TTSSCBCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh-cCchhhhH-HHhhcC-------CCCCCcCHHHHHHH
Confidence            4 89998887653         458999999999999874211 10000000 000111       11247899999999


Q ss_pred             HHHHHcCCc--cCCceEEecCCcc
Q 023110          199 FVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      ++.++....  ..|+.+++.++..
T Consensus       226 ~~~l~~~~~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          226 CVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHcCcccccccCcEEEECCCcc
Confidence            999986542  3688999998764

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.75  E-value=3.4e-18  Score=139.15  Aligned_cols=204  Identities=16%  Similarity=0.167  Sum_probs=127.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccc---cCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ---QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~   72 (287)
                      |||+|+||+++++.|+++|++|++++|+......   .+....... .....++.++.+|+.|.+++.++++..     +
T Consensus        13 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   91 (264)
T 2pd6_A           13 TGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKE-GPPRGNHAAFQADVSEARAARCLLEQVQACFSR   91 (264)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC-------------CCEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccc-cccCcceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            7999999999999999999999999998655221   111000000 000146889999999999988888732     3


Q ss_pred             c-cEEEecCCCCc--------------------ccHHHHHHhCC------C-CccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           73 F-DVVYDINGREA--------------------DEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        73 ~-d~vi~~a~~~~--------------------~~~~~ll~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      + |+|||+||...                    .++.++++++.      + ..+||++||...+...           .
T Consensus        92 i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~  160 (264)
T 2pd6_A           92 PPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN-----------V  160 (264)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC-----------T
T ss_pred             CCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC-----------C
Confidence            4 99999998632                    12334444432      3 5689999997654221           1


Q ss_pred             CCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       125 ~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      +...| .+|..+|.+.+       ..+++++++|||.++++.... ....+........         ....+++.+|+|
T Consensus       161 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~dva  230 (264)
T 2pd6_A          161 GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK-VPQKVVDKITEMI---------PMGHLGDPEDVA  230 (264)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-----------CTGGGC---------TTCSCBCHHHHH
T ss_pred             CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh-cCHHHHHHHHHhC---------CCCCCCCHHHHH
Confidence            22344 99998887653       368999999999999985321 1111111111111         112467899999


Q ss_pred             HHHHHHHcCCc--cCCceEEecCCcccCHHHH
Q 023110          197 RAFVQVLGNEK--ASRQVFNISGEKYVTFDGL  226 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~s~~e~  226 (287)
                      ++++.++....  ..|+.+++.++..++....
T Consensus       231 ~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~  262 (264)
T 2pd6_A          231 DVVAFLASEDSGYITGTSVEVTGGLFMAENLY  262 (264)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred             HHHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence            99999986532  3688999999876655443

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.75  E-value=5.1e-17  Score=132.68  Aligned_cols=191  Identities=16%  Similarity=0.125  Sum_probs=134.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..        .+...++.++.+|+.|.+++.++++..     ++|+
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B           17 TGACGGIGLETSRVLARAGARVVLADLPETDLAGAA--------ASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHH--------HHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876532111        112357889999999999998888743     7999


Q ss_pred             EEecCCCC-c---------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           76 VYDINGRE-A---------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~-~---------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      +||+||.. .                     .++..+++++    .  +..++|++||...+...           .+..
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~  157 (271)
T 3tzq_B           89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAY-----------DMST  157 (271)
T ss_dssp             EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBC-----------SSCH
T ss_pred             EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCC-----------CCCh
Confidence            99999874 1                     1122344443    3  56799999998765321           1223


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      .| .+|...+.+.+       ..++++..++||.+++|..................+.         ..+.+.+|+|+++
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~dvA~~v  228 (271)
T 3tzq_B          158 AYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLA---------GRIGEPHEIAELV  228 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTT---------SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence            34 99999887663       3689999999999999864322223333333332222         1356799999999


Q ss_pred             HHHHcCCc--cCCceEEecCCc
Q 023110          200 VQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      +.++....  ..|+.+++.++.
T Consensus       229 ~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          229 CFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCcccCCcCCCEEEECCCc
Confidence            99986543  368899999983

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.75  E-value=4.9e-18  Score=138.97  Aligned_cols=195  Identities=18%  Similarity=0.167  Sum_probs=129.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+.+.    ..+.....++.++.+|+.|++++.++++..     ++|+
T Consensus        27 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~  102 (274)
T 1ja9_A           27 TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVV----AELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDF  102 (274)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999994322111110    111111356889999999999988887642     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CCCCccEEEEecceee-ccCCCCCCCCCCCCCCCcch-
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~~~~~~-  129 (287)
                      |||+||...                    .++.+++++    ++...+||++||...+ ...           .+...| 
T Consensus       103 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~~Y~  171 (274)
T 1ja9_A          103 VMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI-----------PNHALYA  171 (274)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC-----------CSCHHHH
T ss_pred             EEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCC-----------CCCchHH
Confidence            999998632                    123334333    3212699999998775 321           122234 


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-----------Chh-HHHHHHHHcCCCccCCCCCCceeeee
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----------PVE-EWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                      .+|..+|.+++       ..+++++++|||.++++....           ... .........+.         ....++
T Consensus       172 ~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  242 (274)
T 1ja9_A          172 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN---------PLKRIG  242 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS---------TTSSCB
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcC---------CCCCcc
Confidence            99999987764       248999999999998763110           010 11111111211         123578


Q ss_pred             eHHHHHHHHHHHHcCCc--cCCceEEecCCc
Q 023110          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       191 ~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      +++|+|++++.++..+.  ..|+.|+++++.
T Consensus       243 ~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          243 YPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            99999999999997543  268899998863

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.75  E-value=7e-18  Score=137.27  Aligned_cols=197  Identities=14%  Similarity=0.166  Sum_probs=132.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh-cCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+... ..++.++.+|+.|++++.++++..     ++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (263)
T 3ai3_A           13 TGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAA-----RSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGAD   87 (263)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865421111     011111 246889999999999988887643     799


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +|||+||...                    .++..++++    +.  +..++|++||...+...           .+...
T Consensus        88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  156 (263)
T 3ai3_A           88 ILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL-----------WYEPI  156 (263)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----------CCcch
Confidence            9999998631                    112223333    33  56899999998876422           12223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh----------hHHHHHHHHcC-CCccCCCCCCceeee
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAG-RPIPIPGSGIQVTQL  189 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~~~~  189 (287)
                      | .+|...+.+.+       ..+++++++|||.+++|......          ........... .+         ...+
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~~~  227 (263)
T 3ai3_A          157 YNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAP---------IKRF  227 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCT---------TCSC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCC---------CCCC
Confidence            4 89998887663       35899999999999987311000          00111111111 11         1247


Q ss_pred             eeHHHHHHHHHHHHcCCc--cCCceEEecCCcccC
Q 023110          190 GHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       190 i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      .+++|+|++++.++....  ..|+.|++.++..+|
T Consensus       228 ~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          228 ASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             BCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             cCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            889999999999987543  368899999987654

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.75  E-value=1.1e-17  Score=135.25  Aligned_cols=193  Identities=14%  Similarity=0.190  Sum_probs=131.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCe-EEEEecCCChHHHHhhhhc----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSA----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~D~~d~~~~~~~~~~----~~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+........        .+....+ .++.+|+.|.+++.++++.    .++|+
T Consensus        17 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A           17 TGAGSGIGLEICRAFAASGARLILIDREAAALDRAA--------QELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            799999999999999999999999999865421111        1112355 8899999999999888753    37999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+||....                    +    ++.+++.++  +..+||++||...+....         ..|...|
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------~~~~~~Y  159 (254)
T 2wsb_A           89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNR---------PQFASSY  159 (254)
T ss_dssp             EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS---------SSCBHHH
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCC---------CCcchHH
Confidence            9999986311                    1    223333433  678999999987653221         1222344


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                       .+|...|.+.+       ..+++++++|||.++++...... .+.+........+.         ..+++++|+|++++
T Consensus       160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~  230 (254)
T 2wsb_A          160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPM---------GRCGEPSEIAAAAL  230 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTT---------SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCC---------CCCCCHHHHHHHHH
Confidence             89999887663       24899999999999987321000 01122222222111         24688999999999


Q ss_pred             HHHcCC--ccCCceEEecCCc
Q 023110          201 QVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~  219 (287)
                      .++...  ...|+.+++.++.
T Consensus       231 ~l~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          231 FLASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhCcccccccCCEEEECCCE
Confidence            998653  2368899998874

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.75  E-value=2e-18  Score=135.35  Aligned_cols=164  Identities=20%  Similarity=0.129  Sum_probs=120.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-CCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-~~~d~vi~~   79 (287)
                      |||+|+||++++++|+++  +|++++|+........        .+ ... +++.+|+.|++++.++++. .++|+|||+
T Consensus         6 tGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~--------~~-~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~   73 (207)
T 2yut_A            6 TGATGGLGGAFARALKGH--DLLLSGRRAGALAELA--------RE-VGA-RALPADLADELEAKALLEEAGPLDLLVHA   73 (207)
T ss_dssp             ETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHH--------HH-HTC-EECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred             EcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHH--------Hh-ccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999998  9999999865421110        00 112 8899999999999988863 269999999


Q ss_pred             CCCCc--------------------ccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHH
Q 023110           80 NGREA--------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        80 a~~~~--------------------~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E  136 (287)
                      +|...                    .++.++++++.  +..+||++||...|...           .+...| .+|..+|
T Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~sK~a~~  142 (207)
T 2yut_A           74 VGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQV-----------PGFAAYAAAKGALE  142 (207)
T ss_dssp             CCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSS-----------TTBHHHHHHHHHHH
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----------CCcchHHHHHHHHH
Confidence            98631                    23456777776  66899999998876422           223345 8999988


Q ss_pred             HHhhh-------CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCc
Q 023110          137 SVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       137 ~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (287)
                      .+++.       .+++++++|||.++++..             .+       .+.....+++++|+|++++.+++++.
T Consensus       143 ~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~-------------~~-------~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          143 AYLEAARKELLREGVHLVLVRLPAVATGLW-------------AP-------LGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECCCCBCSGGG-------------GG-------GTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHHHHhhhCCEEEEEecCcccCCCc-------------cc-------cCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            87642       589999999999988730             00       11223578999999999999998765

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.74  E-value=2.2e-17  Score=133.91  Aligned_cols=189  Identities=13%  Similarity=0.076  Sum_probs=128.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.+.          ..++.++.+|+.|.+++.++++..     ++|+
T Consensus        33 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           33 TGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR----------QAGAVALYGDFSCETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH----------HHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH----------hcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999999765322111          135889999999999988887642     7999


Q ss_pred             EEecCCCCc-------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-
Q 023110           76 VYDINGREA-------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~-------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (287)
                      +||+||...                   .++..++++    +.  +..++|++||...+...           .+...| 
T Consensus       103 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~  171 (260)
T 3gem_A          103 VVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS-----------SKHIAYC  171 (260)
T ss_dssp             EEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC-----------SSCHHHH
T ss_pred             EEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC-----------CCcHhHH
Confidence            999999632                   122333333    22  45799999998765321           122334 


Q ss_pred             hhhHHHHHHhh----h--CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       130 ~~k~~~E~~~~----~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      .+|...+.+.+    +  .++++..++||.+.++....   ...........+.         .-+...+|+|++++.++
T Consensus       172 asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~---~~~~~~~~~~~p~---------~r~~~~edva~~v~~L~  239 (260)
T 3gem_A          172 ATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD---AAYRANALAKSAL---------GIEPGAEVIYQSLRYLL  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------------------CCS---------CCCCCTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC---HHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHh
Confidence            99998887663    1  25999999999998764211   1111122222222         12345899999999999


Q ss_pred             cCCccCCceEEecCCcccC
Q 023110          204 GNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s  222 (287)
                      +.....|+.+++.++..++
T Consensus       240 ~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          240 DSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             HCSSCCSCEEEESTTTTTC
T ss_pred             hCCCCCCCEEEECCCcccC
Confidence            7666689999999987654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.74  E-value=2.3e-17  Score=133.01  Aligned_cols=193  Identities=14%  Similarity=0.171  Sum_probs=130.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh-hcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|+++|++|++++|+........     ..+.. ....+.++.+|+.|.+++.+++++.     ++|
T Consensus        13 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   87 (248)
T 2pnf_A           13 TGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVA-----EEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGID   87 (248)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-----HHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            799999999999999999999999999865421110     01111 1346889999999999998888642     799


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +|||+||...                    .++.+++++    +.  +..++|++||...+...           .+...
T Consensus        88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  156 (248)
T 2pnf_A           88 ILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN-----------VGQVN  156 (248)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC-----------TTCHH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC-----------CCCch
Confidence            9999998632                    123223333    32  56899999997654221           11223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      | .+|...|.+.+       ..+++++++|||.++++.... +...+........+         ...+++++|+|++++
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~  226 (248)
T 2pnf_A          157 YSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV-LSEEIKQKYKEQIP---------LGRFGSPEEVANVVL  226 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCT---------TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh-ccHHHHHHHHhcCC---------CCCccCHHHHHHHHH
Confidence            4 89998887653       347999999999999874321 11112222222211         124778999999999


Q ss_pred             HHHcCC--ccCCceEEecCCc
Q 023110          201 QVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~  219 (287)
                      .++...  ...|+.|++.++.
T Consensus       227 ~l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          227 FLCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCchhhcCCCcEEEeCCCc
Confidence            998653  2358899998863

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.74  E-value=1.6e-17  Score=134.55  Aligned_cols=198  Identities=15%  Similarity=0.117  Sum_probs=135.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..     ..+.....++.++.+|+.|.+++.++++..     ++|+
T Consensus        18 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   92 (256)
T 3gaf_A           18 TGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVA-----AAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITV   92 (256)
T ss_dssp             CSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999875522111     111122357899999999999888887643     7999


Q ss_pred             EEecCCCCc-------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-
Q 023110           76 VYDINGREA-------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~-------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (287)
                      +||+||...                   .++..++++    +.  +..++|++||...+..           ..+...| 
T Consensus        93 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  161 (256)
T 3gaf_A           93 LVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENT-----------NVRMASYG  161 (256)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCC-----------CTTCHHHH
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCC-----------CCCchHHH
Confidence            999998732                   123334444    22  5579999999876432           1122334 


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+.+       ..++++..++||.+.++..................++         ..+.+++|+|++++.+
T Consensus       162 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~~~~L  232 (256)
T 3gaf_A          162 SSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPL---------GRLGEAQDIANAALFL  232 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTT---------SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHH
Confidence            99998887663       3589999999999987631100011222233322222         2467799999999999


Q ss_pred             HcCCc--cCCceEEecCCcccCH
Q 023110          203 LGNEK--ASRQVFNISGEKYVTF  223 (287)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~~~s~  223 (287)
                      +....  ..|+.+++.++...++
T Consensus       233 ~s~~~~~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          233 CSPAAAWISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             HSGGGTTCCSCEEEESTTSCCC-
T ss_pred             cCCcccCccCCEEEECCCccccC
Confidence            86532  3689999999876654

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.74  E-value=2.7e-17  Score=133.64  Aligned_cols=196  Identities=16%  Similarity=0.128  Sum_probs=129.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEc-CCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|+++|++|++++| +........     ..+......+.++.+|+.|.+++.++++..     ++|
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (261)
T 1gee_A           13 TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVL-----EEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLD   87 (261)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999 443211110     011111346788999999999888887643     799


Q ss_pred             EEEecCCCCcc--------------------cHHHHHHh----CC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           75 VVYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      +|||+||....                    ++.+++++    +.  + ..++|++||...+.           +..+..
T Consensus        88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~  156 (261)
T 1gee_A           88 VMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-----------PWPLFV  156 (261)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------CCTTCH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC-----------CCCCcc
Confidence            99999986321                    12223333    32  3 57999999976542           122333


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      .| .+|...+.+.+       ..+++++++|||.++++...... ............+         ...+++++|+|++
T Consensus       157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~  227 (261)
T 1gee_A          157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIP---------MGYIGEPEEIAAV  227 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCT---------TSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCC---------CCCCcCHHHHHHH
Confidence            45 89988776653       34899999999999988421100 0111222222111         1246789999999


Q ss_pred             HHHHHcCC--ccCCceEEecCCccc
Q 023110          199 FVQVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~~~  221 (287)
                      ++.++...  ...|+.+++.++..+
T Consensus       228 ~~~l~~~~~~~~~G~~~~v~gg~~~  252 (261)
T 1gee_A          228 AAWLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCccccCCCCcEEEEcCCccc
Confidence            99998643  236889999988643

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.73  E-value=4.6e-17  Score=133.70  Aligned_cols=211  Identities=15%  Similarity=0.140  Sum_probs=135.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCCh-------hhhhhhcCCeEEEEecCCChHHHHhhhhcC--
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--   71 (287)
                      |||+|+||+++++.|+++|++|++++|+.............       ..+......+.++.+|+.|.+++.++++..  
T Consensus        16 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (281)
T 3s55_A           16 TGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAED   95 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999999985431111100000       111122457889999999999988888643  


Q ss_pred             ---CccEEEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCC
Q 023110           72 ---GFDVVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (287)
Q Consensus        72 ---~~d~vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (287)
                         ++|++||+||...                    .++..++++    +.  +..++|++||...+...          
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  165 (281)
T 3s55_A           96 TLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSAN----------  165 (281)
T ss_dssp             HHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC----------
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCC----------
Confidence               7999999999732                    123334444    32  56799999998765321          


Q ss_pred             CCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHH-HHHHHHcCCC----ccCCCCCCceeee
Q 023110          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEW-FFHRLKAGRP----IPIPGSGIQVTQL  189 (287)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~  189 (287)
                       .+...| .+|..++.+.+       ..++++..++||.+++|......... +.........    ..+.........+
T Consensus       166 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (281)
T 3s55_A          166 -FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF  244 (281)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSC
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCC
Confidence             122334 99998887653       35899999999999998643211000 0000000000    0000001112467


Q ss_pred             eeHHHHHHHHHHHHcCCc--cCCceEEecCCcccC
Q 023110          190 GHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       190 i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      .+++|+|++++.++....  ..|+.+++.++...+
T Consensus       245 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          245 LKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             CCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            899999999999987543  368999999987654

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.73  E-value=6.8e-18  Score=136.75  Aligned_cols=196  Identities=13%  Similarity=0.076  Sum_probs=129.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+... .+..        .+ ... .++.+|+.|.+++.++++..     ++|+
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~--------~~-~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   80 (256)
T 2d1y_A           12 TGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVA--------EA-IGG-AFFQVDLEDERERVRFVEEAAYALGRVDV   80 (256)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHH--------HH-HTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHH--------HH-hhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998754 2111        11 114 78999999999888887642     7899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++.+++++    ++  +..++|++||...+...           .+...|
T Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  149 (256)
T 2d1y_A           81 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-----------QENAAY  149 (256)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-----------TTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC-----------CCChhH
Confidence            999998632                    122333333    32  56899999998754221           122334


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHH-cCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK-AGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                       .+|...+.+.+       ..++++.+++||.+.++.     ...++.... ................+++++|+|++++
T Consensus       150 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~  224 (256)
T 2d1y_A          150 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA-----VLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVL  224 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-----HHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch-----hhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence             99998887663       358999999999987652     111100000 0110000011112235789999999999


Q ss_pred             HHHcCCc--cCCceEEecCCcccCH
Q 023110          201 QVLGNEK--ASRQVFNISGEKYVTF  223 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~~s~  223 (287)
                      .++....  ..|+.+++.++...++
T Consensus       225 ~l~s~~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          225 FLASEKASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HHhCchhcCCCCCEEEECCCccccc
Confidence            9986542  3688999999876554

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.73  E-value=6.2e-17  Score=130.84  Aligned_cols=194  Identities=15%  Similarity=0.172  Sum_probs=129.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..        .+...++.++.+|+.|.+++.++++..     ++|+
T Consensus        12 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A           12 TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLA--------AELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH--------HHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421110        111246889999999999988887642     5799


Q ss_pred             EEecCCCCcc------------------------cHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~------------------------~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....                        .++.++..++  + .++|++||...+...           .+...|
T Consensus        84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----------~~~~~Y  151 (253)
T 1hxh_A           84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPI-----------EQYAGY  151 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCC-----------TTBHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCC-----------CCCccH
Confidence            9999986321                        1334555554  5 899999998765321           122234


Q ss_pred             -hhhHHHHHHhhh-------C--CCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          130 -KGKLNTESVLES-------K--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       130 -~~k~~~E~~~~~-------~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                       .+|...+.+.+.       .  +++++++|||.+++|....................     ......+.+.+|+|+++
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-----~~p~~~~~~~~dvA~~~  226 (253)
T 1hxh_A          152 SASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPK-----LNRAGRAYMPERIAQLV  226 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTT-----TBTTCCEECHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhc-----cCccCCCCCHHHHHHHH
Confidence             899988876642       3  89999999999998731000000000000111000     01112478999999999


Q ss_pred             HHHHcCCc--cCCceEEecCCc
Q 023110          200 VQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      +.++....  ..|+.+++.++.
T Consensus       227 ~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          227 LFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHHHSGGGTTCCSCEEEESSSC
T ss_pred             HHHcCccccCCCCcEEEECCCc
Confidence            99987542  368899998874

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.73  E-value=1.5e-16  Score=128.25  Aligned_cols=191  Identities=15%  Similarity=0.148  Sum_probs=129.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.        ..+....+.++.+|+.+.+++.+++++. ++|++||+
T Consensus        20 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   91 (249)
T 3f9i_A           20 TGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSL--------GNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCN   91 (249)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--------HHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            79999999999999999999999999986552211        1112357889999999999999998865 69999999


Q ss_pred             CCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhh
Q 023110           80 NGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (287)
Q Consensus        80 a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (287)
                      ||...                    .++..++++    +.  +..++|++||...+...           .+...| .+|
T Consensus        92 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~sK  160 (249)
T 3f9i_A           92 AGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN-----------PGQANYCASK  160 (249)
T ss_dssp             CC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC-----------SCSHHHHHHH
T ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC-----------CCCchhHHHH
Confidence            98632                    123334333    22  55799999998765322           122334 999


Q ss_pred             HHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcC
Q 023110          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (287)
                      ...+.+.+       ..++++.+++||.+.++.... .............+         ...+.+.+|+|++++.++..
T Consensus       161 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~  230 (249)
T 3f9i_A          161 AGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDK-LNEKQREAIVQKIP---------LGTYGIPEDVAYAVAFLASN  230 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBC-------CCHHHHHHHHHHCT---------TCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccc-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCC
Confidence            98887653       358999999999998874322 12222222222221         13467799999999999975


Q ss_pred             Cc--cCCceEEecCCcc
Q 023110          206 EK--ASRQVFNISGEKY  220 (287)
Q Consensus       206 ~~--~~~~~~~i~~~~~  220 (287)
                      ..  ..|+.+++.++..
T Consensus       231 ~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          231 NASYITGQTLHVNGGML  247 (249)
T ss_dssp             GGTTCCSCEEEESTTSS
T ss_pred             ccCCccCcEEEECCCEe
Confidence            43  3688999998754

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.73  E-value=7.3e-17  Score=130.61  Aligned_cols=197  Identities=18%  Similarity=0.234  Sum_probs=130.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....  .     ..+.....++.++.+|+.|++++.++++..     ++|+
T Consensus        10 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~--~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A           10 TGSTSGIGLGIAQVLARAGANIVLNGFGDPAPA--L-----AEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHH--H-----HHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHH--H-----HHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865210  0     111111246888999999999998888643     7999


Q ss_pred             EEecCCCCcc------------------------cHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~------------------------~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....                        .++.++..++  +..++|++||...+...           .+...|
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  151 (255)
T 2q2v_A           83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS-----------TGKAAY  151 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC-----------CCchhH
Confidence            9999986321                        1333444443  56899999998765321           112234


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHH--HHHcCCC----ccCCCCCCceeeeeeHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH--RLKAGRP----IPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~i~~~D~  195 (287)
                       .+|...+.+.+       ..++++++++||.+++|..     .....  .......    -.+.........+++++|+
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv  226 (255)
T 2q2v_A          152 VAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLV-----QKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHL  226 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHH-----HHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcch-----hhhcccccccccchHHHHHHHHhccCCCCCCcCHHHH
Confidence             89998887663       3579999999999988731     11110  0000000    0000111112357899999


Q ss_pred             HHHHHHHHcCCc--cCCceEEecCCcc
Q 023110          196 ARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      |++++.++....  ..|+.|++.++..
T Consensus       227 A~~~~~l~s~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          227 GELVLFLCSEAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhCCccCCCCCCEEEECCCcc
Confidence            999999986533  3588999998754

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.73  E-value=7.9e-17  Score=130.56  Aligned_cols=194  Identities=12%  Similarity=0.153  Sum_probs=127.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+...+        ....+.++.+|+.|.+++.++++..     ++|+
T Consensus        13 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A           13 TGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE--------LGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH--------hCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999997763322221        1347889999999999988887643     7999


Q ss_pred             EEecCCCCc------------------------ccHHHHHHh----CC--------CCccEEEEecceeeccCCCCCCCC
Q 023110           76 VYDINGREA------------------------DEVEPILDA----LP--------NLEQFIYCSSAGVYLKSDLLPHCE  119 (287)
Q Consensus        76 vi~~a~~~~------------------------~~~~~ll~~----~~--------~~~~~i~~Ss~~v~~~~~~~~~~e  119 (287)
                      +||+||...                        .++..++++    +.        +..++|++||...+....      
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~------  158 (257)
T 3tpc_A           85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI------  158 (257)
T ss_dssp             EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT------
T ss_pred             EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC------
Confidence            999998641                        112223333    22        235799999987653221      


Q ss_pred             CCCCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeee
Q 023110          120 TDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       120 ~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                           +...| .+|...+.+.+       ..++++..++||.+.++.... ............  .+.      ...+.+
T Consensus       159 -----~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~--~p~------~~r~~~  224 (257)
T 3tpc_A          159 -----GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAG-MPQDVQDALAAS--VPF------PPRLGR  224 (257)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------CC--SSS------SCSCBC
T ss_pred             -----CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhcc-CCHHHHHHHHhc--CCC------CCCCCC
Confidence                 22234 99998887652       368999999999998874211 111111111111  111      024678


Q ss_pred             HHHHHHHHHHHHcCCccCCceEEecCCcccC
Q 023110          192 VKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       192 ~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (287)
                      .+|+|++++.+++.....|+.+++.++..++
T Consensus       225 ~~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          225 AEEYAALVKHICENTMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred             HHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence            9999999999998766689999999987654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.73  E-value=1.8e-17  Score=134.80  Aligned_cols=192  Identities=15%  Similarity=0.164  Sum_probs=129.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.........        +...++.++.+|+.|.+++.++++..     ++|+
T Consensus        18 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           18 TGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVA--------GLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------TCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654221111        01136788999999999988887643     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||+||...                    .++..++++    +.  + ..++|++||...+...           .+...
T Consensus        90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  158 (263)
T 3ak4_A           90 LCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA-----------PLLAH  158 (263)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC-----------CCchh
Confidence            999998631                    112233333    22  3 5799999997764221           12223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-----h-----HHHHHHHHcCCCccCCCCCCceeeee
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----E-----EWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                      | .+|...+.+.+       ..+++++++|||.++++......     .     ...........+         ...++
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~~~~  229 (263)
T 3ak4_A          159 YSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTP---------LGRIE  229 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCT---------TCSCB
T ss_pred             HHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCC---------CCCCc
Confidence            4 89998887663       34899999999999887311000     0     011111111111         12478


Q ss_pred             eHHHHHHHHHHHHcCC--ccCCceEEecCCcc
Q 023110          191 HVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       191 ~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      +++|+|++++.++...  ...|+.|++.++..
T Consensus       230 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          230 EPEDVADVVVFLASDAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence            8999999999998654  23688999998754

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.72  E-value=4.4e-18  Score=138.78  Aligned_cols=203  Identities=16%  Similarity=0.173  Sum_probs=135.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccc---cCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ---QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~   72 (287)
                      |||+|+||++++++|+++|++|++++|+.....+   .+....      ...++.++.+|+.|++++.++++..     +
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (267)
T 2gdz_A           13 TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF------EPQKTLFIQCDVADQQQLRDTFRKVVDHFGR   86 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS------CGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc------CCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999998654211   111000      0236889999999999998887642     5


Q ss_pred             ccEEEecCCCCcc----------------cHHHHHHhCC--C---CccEEEEecceeeccCCCCCCCCCCCCCCCcch-h
Q 023110           73 FDVVYDINGREAD----------------EVEPILDALP--N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        73 ~d~vi~~a~~~~~----------------~~~~ll~~~~--~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (287)
                      +|+|||+||....                .++.+++.+.  +   ..++|++||...+...           .+...| .
T Consensus        87 id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~  155 (267)
T 2gdz_A           87 LDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-----------AQQPVYCA  155 (267)
T ss_dssp             CCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------TTCHHHHH
T ss_pred             CCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-----------CCCchHHH
Confidence            8999999986421                2345566654  2   5789999998775421           112234 8


Q ss_pred             hhHHHHHHhh---------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccC---CCCCCceeeeeeHHHHHHH
Q 023110          131 GKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI---PGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       131 ~k~~~E~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~D~a~~  198 (287)
                      +|..++.+.+         ..++++.+++||.+.++.... ....   .... .....   .........+++.+|+|++
T Consensus       156 sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~dvA~~  230 (267)
T 2gdz_A          156 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES-IEKE---ENMG-QYIEYKDHIKDMIKYYGILDPPLIANG  230 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG-GGCH---HHHG-GGGGGHHHHHHHHHHHCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc-cccc---cccc-hhhhHHHHHHHHhccccCCCHHHHHHH
Confidence            8988776543         358999999999997762100 0000   0000 00000   0000112346789999999


Q ss_pred             HHHHHcCCccCCceEEecCCcccCHHH
Q 023110          199 FVQVLGNEKASRQVFNISGEKYVTFDG  225 (287)
Q Consensus       199 ~~~~~~~~~~~~~~~~i~~~~~~s~~e  225 (287)
                      ++.++......|+.+++.+++..++.|
T Consensus       231 v~~l~s~~~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          231 LITLIEDDALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             HHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             HHHHhcCcCCCCcEEEecCCCcccccC
Confidence            999998766688999999988776654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.72  E-value=4.8e-17  Score=131.01  Aligned_cols=192  Identities=16%  Similarity=0.205  Sum_probs=122.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEE-EcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|+++|++|+++ .|+........     ..+.....++.++.+|+.|++++.++++..     ++|
T Consensus        11 tGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   85 (247)
T 2hq1_A           11 TGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATA-----EEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRID   85 (247)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHH-----HHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            7999999999999999999999999 45544321110     111111356889999999999998887643     799


Q ss_pred             EEEecCCCCc--------------------ccHHHHH----HhCC--CCccEEEEecce-eeccCCCCCCCCCCCCCCCc
Q 023110           75 VVYDINGREA--------------------DEVEPIL----DALP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll----~~~~--~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~~~~  127 (287)
                      +|||+||...                    .++.++.    +.+.  +..++|++||.. .|+..            +..
T Consensus        86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~  153 (247)
T 2hq1_A           86 ILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA------------GQA  153 (247)
T ss_dssp             EEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------CH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC------------CCc
Confidence            9999998631                    1222233    3332  568999999974 33321            122


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      .| .+|...|.+.+       ..++++.+++||.+.++.... +..........+.+         ...+++.+|+|+++
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~  223 (247)
T 2hq1_A          154 NYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV-LPDKVKEMYLNNIP---------LKRFGTPEEVANVV  223 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHTTST---------TSSCBCHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh-cchHHHHHHHhhCC---------CCCCCCHHHHHHHH
Confidence            34 89998887663       248999999999987753111 11112222222221         12467899999999


Q ss_pred             HHHHcCCc--cCCceEEecCCc
Q 023110          200 VQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      +.++..+.  ..|+.|+++++.
T Consensus       224 ~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          224 GFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHcCcccccccCcEEEeCCCc
Confidence            99886532  367899999875

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.72  E-value=1.2e-16  Score=128.74  Aligned_cols=195  Identities=16%  Similarity=0.174  Sum_probs=134.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..     ..+......+.++.+|+.|.+++.++++..     ++|+
T Consensus        11 TGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (247)
T 3lyl_A           11 TGASRGIGFEVAHALASKGATVVGTATSQASAEKFE-----NSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDI   85 (247)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876532111     111122357899999999999988887642     6899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++.+++++    +.  +..++|++||...+....           +...|
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y  154 (247)
T 3lyl_A           86 LVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNP-----------GQTNY  154 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------TCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC-----------CcHHH
Confidence            999999742                    122333333    22  556999999987653211           22334


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                       .+|...+.+.+       ..++++..++||.+.++.... .............+         ...+.+++|+|++++.
T Consensus       155 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~i~~  224 (247)
T 3lyl_A          155 CAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDK-LTDEQKSFIATKIP---------SGQIGEPKDIAAAVAF  224 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTT-SCHHHHHHHHTTST---------TCCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchh-ccHHHHHHHhhcCC---------CCCCcCHHHHHHHHHH
Confidence             99998776653       358999999999998875322 22222222222211         2356789999999999


Q ss_pred             HHcCCc--cCCceEEecCCccc
Q 023110          202 VLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (287)
                      ++....  ..|+.+++.++..+
T Consensus       225 l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          225 LASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSC
T ss_pred             HhCCCcCCccCCEEEECCCEec
Confidence            986543  36899999988654

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.72  E-value=2.2e-17  Score=134.38  Aligned_cols=202  Identities=15%  Similarity=0.202  Sum_probs=134.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.........    ........++.++.+|+.|.+++.++++.     ..+|+
T Consensus        20 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   95 (265)
T 1h5q_A           20 TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTE----KVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG   95 (265)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHH----HHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHH----HHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999997654221111    00011135788999999999988887763     25999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhCC------C-CccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||+||...                    .++.++++++.      + ..+||++||...+.....    ...+..+...
T Consensus        96 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~~~~~~~~  171 (265)
T 1h5q_A           96 LIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SLNGSLTQVF  171 (265)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ETTEECSCHH
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----cccccccccc
Confidence            999998632                    12334444432      2 478999999876532110    0112223444


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      | .+|...|.+++       ..+++++++|||.++++.... .............+.         ..+++.+|+|++++
T Consensus       172 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~  241 (265)
T 1h5q_A          172 YNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH-MDKKIRDHQASNIPL---------NRFAQPEEMTGQAI  241 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCTT---------SSCBCGGGGHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccc-cchhHHHHHHhcCcc---------cCCCCHHHHHHHHH
Confidence            5 99999887763       348999999999999874221 112222222222111         23678999999999


Q ss_pred             HHHcCCc--cCCceEEecCCcc
Q 023110          201 QVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      .++....  ..|+.|++.++..
T Consensus       242 ~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          242 LLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGG
T ss_pred             hhccCchhcCcCcEEEecCCEe
Confidence            9986542  3688999998864

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.72  E-value=7e-17  Score=131.64  Aligned_cols=194  Identities=18%  Similarity=0.199  Sum_probs=132.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+.+.    ..+......+.++.+|+.|.+++.++++..     ++|+
T Consensus        34 TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~  109 (269)
T 4dmm_A           34 TGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVV----AAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDV  109 (269)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999986443221111    111222357889999999999988887643     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++..++++    +.  +..++|++||...+....           ....|
T Consensus       110 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y  178 (269)
T 4dmm_A          110 LVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNP-----------GQANY  178 (269)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCT-----------TCHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC-----------CchhH
Confidence            999998742                    122333443    22  567999999977643211           12234


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                       .+|...+.+.+       ..++++..++||.+.++.... .   .........+.         ..+.+.+|+|++++.
T Consensus       179 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~---~~~~~~~~~p~---------~r~~~~~dvA~~v~~  245 (269)
T 4dmm_A          179 SAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE-L---AAEKLLEVIPL---------GRYGEAAEVAGVVRF  245 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH-H---HHHHHGGGCTT---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc-c---cHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence             89998876653       358999999999998874321 1   11222222221         235678999999999


Q ss_pred             HHcCCc---cCCceEEecCCcccC
Q 023110          202 VLGNEK---ASRQVFNISGEKYVT  222 (287)
Q Consensus       202 ~~~~~~---~~~~~~~i~~~~~~s  222 (287)
                      ++..+.   ..|+.+++.++..++
T Consensus       246 l~s~~~~~~itG~~i~vdGG~~~s  269 (269)
T 4dmm_A          246 LAADPAAAYITGQVINIDGGLVMA  269 (269)
T ss_dssp             HHHCGGGGGCCSCEEEESTTSCCC
T ss_pred             HhCCcccCCCcCCEEEECCCeecC
Confidence            997732   368999999986543

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.72  E-value=9.3e-17  Score=132.40  Aligned_cols=196  Identities=17%  Similarity=0.197  Sum_probs=134.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh-cCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|+++|++|++++|+.....+...     .+... ...+.++.+|+.|.+++.++++..     ++|
T Consensus        47 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  121 (293)
T 3rih_A           47 TGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTA-----ELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALD  121 (293)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHH-----HHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999999998765321111     11111 147889999999999888877643     789


Q ss_pred             EEEecCCCC--------------------cccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      ++||+||..                    +.++..+++++    .  +..++|++||...+..          ...+...
T Consensus       122 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~----------~~~~~~~  191 (293)
T 3rih_A          122 VVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT----------GYPGWSH  191 (293)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTB----------BCTTCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccC----------CCCCCHH
Confidence            999999873                    12344455554    2  6679999999764210          0112233


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      | .+|..++.+.+       ..++++..++||.++++.... ....+........++.         -+...+|+|++++
T Consensus       192 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~~---------r~~~p~dvA~~v~  261 (293)
T 3rih_A          192 YGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVD-MGEEYISGMARSIPMG---------MLGSPVDIGHLAA  261 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH-TCHHHHHHHHTTSTTS---------SCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhh-ccHHHHHHHHhcCCCC---------CCCCHHHHHHHHH
Confidence            4 99998887663       358999999999999874211 1122333333333322         2346899999999


Q ss_pred             HHHcCC--ccCCceEEecCCccc
Q 023110          201 QVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~~  221 (287)
                      .++...  ...|+.+++.++..+
T Consensus       262 fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          262 FLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHhCccccCCCCCEEEECCCccC
Confidence            998653  236889999998654

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.72  E-value=6.7e-17  Score=130.11  Aligned_cols=190  Identities=14%  Similarity=0.121  Sum_probs=129.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|+||++++++|+++|++|++++|+.....+.. +         ..++.++.+|+.|++++.++++.. ++|++||+
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~---------~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~   81 (246)
T 2ag5_A           12 TAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-K---------YPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (246)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-G---------STTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-h---------ccCceEEEeeCCCHHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999999865432111 1         236889999999999988776543 79999999


Q ss_pred             CCCCcc--------------------cHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhh
Q 023110           80 NGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (287)
Q Consensus        80 a~~~~~--------------------~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (287)
                      ||....                    ++..++++    +.  +..++|++||...+...          +.+...| .+|
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~~Y~~sK  151 (246)
T 2ag5_A           82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG----------VVNRCVYSTTK  151 (246)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----------CTTBHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC----------CCCCccHHHHH
Confidence            986321                    12223333    32  56899999997764321          1022234 999


Q ss_pred             HHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-----hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      ...|.+.+       ..+++++++|||.+++|......     ............+.         ..+.+.+|+|++++
T Consensus       152 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dvA~~v~  222 (246)
T 2ag5_A          152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT---------GRFATAEEIAMLCV  222 (246)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT---------SSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCC---------CCCCCHHHHHHHHH
Confidence            99887764       24899999999999987311000     01111112211111         13678999999999


Q ss_pred             HHHcCCc--cCCceEEecCCc
Q 023110          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (287)
                      .++....  ..|+.+++.++.
T Consensus       223 ~l~s~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          223 YLASDESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             HHHSGGGTTCCSCEEEECTTG
T ss_pred             HHhCccccCCCCCEEEECCCc
Confidence            9986532  368899998874

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.72  E-value=2.3e-17  Score=132.68  Aligned_cols=193  Identities=12%  Similarity=0.196  Sum_probs=129.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEE-EcCCccccccCCCCChhhhhhhcCCeEE-EEecCCChHHHHhhhhc-----CCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILH-LKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~D~~d~~~~~~~~~~-----~~~   73 (287)
                      |||+|+||++++++|+++|++|+++ +|+........     ..+.....++.. +.+|+.|.+++.++++.     .++
T Consensus         7 TGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (245)
T 2ph3_A            7 TGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVA-----EEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL   81 (245)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHH-----HHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999998 67654421110     011111235666 89999999988887653     279


Q ss_pred             cEEEecCCCCc--------------------cc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           74 DVVYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      |+|||+||...                    .+    ++.+++.++  +..++|++||...+...           .+..
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~  150 (245)
T 2ph3_A           82 DTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN-----------PGQA  150 (245)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------SSBH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC-----------CCCc
Confidence            99999998632                    11    334455554  67899999997654221           1122


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      .| .+|...+.+.+       ..+++++++|||.++++.... .............+         ...+++++|+|+++
T Consensus       151 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~  220 (245)
T 2ph3_A          151 NYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER-LPQEVKEAYLKQIP---------AGRFGRPEEVAEAV  220 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHTCT---------TCSCBCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHH
Confidence            34 89998876653       248999999999998874211 11122222222211         12467999999999


Q ss_pred             HHHHcCCc--cCCceEEecCCc
Q 023110          200 VQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      +.++..+.  ..|+.|++.++.
T Consensus       221 ~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          221 AFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHhCcccccccCCEEEECCCC
Confidence            99986542  358899998864

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.72  E-value=7.4e-18  Score=136.86  Aligned_cols=197  Identities=14%  Similarity=0.110  Sum_probs=131.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc------CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~------~~~d   74 (287)
                      |||+|+||++++++|+++|++|++++|+........     ..+.....++.++.+|+.|++++.++++.      .++|
T Consensus        15 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   89 (260)
T 2ae2_A           15 TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL-----TQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN   89 (260)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCC
Confidence            799999999999999999999999999865422111     11111124688899999999988888753      3799


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      ++||+||...                    .++.++++++    .  +..++|++||...+...           .+...
T Consensus        90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  158 (260)
T 2ae2_A           90 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV-----------PYEAV  158 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----------CCcch
Confidence            9999998631                    1233344443    2  56799999998764321           12223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHH---HHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFH---RLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      | .+|...|.+.+       ..++++.+++||.+.++...... ......   ......+         ...+.+.+|+|
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA  229 (260)
T 2ae2_A          159 YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA---------LRRMGEPKELA  229 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST---------TCSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCC---------CCCCCCHHHHH
Confidence            4 99999887763       24899999999999876210000 000011   1111111         12477899999


Q ss_pred             HHHHHHHcCCc--cCCceEEecCCcccC
Q 023110          197 RAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      ++++.++....  ..|+.+++.++...+
T Consensus       230 ~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          230 AMVAFLCFPAASYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHcCccccCCCCCEEEECCCcccc
Confidence            99999886532  368899999986543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.72  E-value=1.9e-17  Score=136.60  Aligned_cols=198  Identities=19%  Similarity=0.219  Sum_probs=132.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.........    .........+.++.+|+.|.+++.+++++.     ++|+
T Consensus        53 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  128 (291)
T 3ijr_A           53 TGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETK----QYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNI  128 (291)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998754221111    111112357889999999999888887643     7999


Q ss_pred             EEecCCCCc---------------------ccHHHHHHhC----CCCccEEEEecceeeccCCCCCCCCCCCCCCCcchh
Q 023110           76 VYDINGREA---------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~ll~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  130 (287)
                      +||+||...                     .++..+++++    +...++|++||...+.....          ...|..
T Consensus       129 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~Y~a  198 (291)
T 3ijr_A          129 LVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNET----------LIDYSA  198 (291)
T ss_dssp             EEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTT----------CHHHHH
T ss_pred             EEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCC----------ChhHHH
Confidence            999998631                     1233344443    34458999999887643211          122449


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      +|...+.+.+       ..++++..++||.++++..............         ........+.+.+|+|++++.++
T Consensus       199 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~---------~~~~p~~r~~~p~dvA~~v~~L~  269 (291)
T 3ijr_A          199 TKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQF---------GSNVPMQRPGQPYELAPAYVYLA  269 (291)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHT---------TTTSTTSSCBCGGGTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHH---------HccCCCCCCcCHHHHHHHHHHHh
Confidence            9998887653       3489999999999988731000001111111         11112234678999999999998


Q ss_pred             cCCc--cCCceEEecCCccc
Q 023110          204 GNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       204 ~~~~--~~~~~~~i~~~~~~  221 (287)
                      ....  ..|+.+++.++..+
T Consensus       270 s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          270 SSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             SGGGTTCCSCEEEESSSCCC
T ss_pred             CCccCCCcCCEEEECCCccc
Confidence            6542  37889999987543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.72  E-value=8.7e-17  Score=130.51  Aligned_cols=187  Identities=16%  Similarity=0.159  Sum_probs=131.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..        .+....+.++.+|+.|++++.++++..     ++|+
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A           13 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA--------AELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111        111235788999999999988887642     7999


Q ss_pred             EEecCCCCcc--------------------cH----HHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....                    ++    +.+++.++  +..++|++||...+...           .+...|
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  153 (260)
T 1nff_A           85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-----------VACHGY  153 (260)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC-----------CCchhH
Confidence            9999986321                    12    34444444  66899999998775321           122234


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                       .+|...+.+.+       ..+++++++|||.++++...  .         ....+.  .  .....+.+.+|+|++++.
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~---------~~~~~~--~--~~~~~~~~~~dvA~~v~~  218 (260)
T 1nff_A          154 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--W---------VPEDIF--Q--TALGRAAEPVEVSNLVVY  218 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--T---------SCTTCS--C--CSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--c---------chhhHH--h--CccCCCCCHHHHHHHHHH
Confidence             89998887663       35899999999999988421  0         001110  0  111246789999999999


Q ss_pred             HHcCCc--cCCceEEecCCccc
Q 023110          202 VLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (287)
                      ++....  ..|+.|++.++...
T Consensus       219 l~s~~~~~~~G~~~~v~gG~~~  240 (260)
T 1nff_A          219 LASDESSYSTGAEFVVDGGTVA  240 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCccccCCcCCEEEECCCeec
Confidence            986532  35889999998653

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.72  E-value=4.7e-17  Score=133.54  Aligned_cols=204  Identities=19%  Similarity=0.216  Sum_probs=129.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh-cCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|+++|++|++++|+.....+.+.    ..+... ...+.++.+|+.|.+++.++++..     ++|
T Consensus        31 TGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  106 (281)
T 3v2h_A           31 TGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVT----DEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGAD  106 (281)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHH----HHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCC
Confidence            7999999999999999999999999995433111110    011111 357889999999999988887643     799


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      ++||+||...                    .++..+++++    .  +..++|++||...+...           .....
T Consensus       107 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  175 (281)
T 3v2h_A          107 ILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS-----------PFKSA  175 (281)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC-----------CCchH
Confidence            9999999731                    1233344442    3  56789999997764321           11223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHH-HHHHHcCCC-ccCCCCCCceeeeeeHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWF-FHRLKAGRP-IPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      | .+|..++.+.+       ..++++..++||.+.++.......... .......+. .....+......+++++|+|++
T Consensus       176 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~  255 (281)
T 3v2h_A          176 YVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASL  255 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHH
Confidence            4 99998887653       358999999999999874221110000 000000000 0111223334568999999999


Q ss_pred             HHHHHcCCc--cCCceEEecCCc
Q 023110          199 FVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++.++....  ..|+.+++.++.
T Consensus       256 v~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          256 ALYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             HHHHHSSGGGGCCSCEEEESTTG
T ss_pred             HHHHcCCCcCCCCCcEEEECCCc
Confidence            999987643  378899999875

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.72  E-value=8.2e-17  Score=130.22  Aligned_cols=191  Identities=16%  Similarity=0.144  Sum_probs=130.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+...        +....+.++.+|+.|++++.++++..     ++|+
T Consensus        11 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A           11 TGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAR--------ELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------TTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654221111        11246888999999999888887642     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....                    +    ++.+++.++  +..++|++||...+...           .+...|
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  151 (254)
T 1hdc_A           83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL-----------ALTSSY  151 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-----------CCchhH
Confidence            9999986321                    1    224555554  56899999998765321           122234


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeee-eHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG-HVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~D~a~~~~  200 (287)
                       .+|...+.+.+       ..++++.+++||.++++.     ..    .. ................+. +.+|+|++++
T Consensus       152 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-----~~----~~-~~~~~~~~~~~~p~~~~~~~~~dvA~~v~  221 (254)
T 1hdc_A          152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-----TA----ET-GIRQGEGNYPNTPMGRVGNEPGEIAGAVV  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-----HH----HH-TCCCSTTSCTTSTTSSCB-CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc-----cc----cc-chhHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence             89998887653       358999999999998862     11    11 111000001101112356 8999999999


Q ss_pred             HHHcCCc--cCCceEEecCCcc
Q 023110          201 QVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      .++....  ..|+.+++.++..
T Consensus       222 ~l~s~~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          222 KLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHhCchhcCCCCCEEEECCCcc
Confidence            9986542  3688999988754

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.72  E-value=4.1e-17  Score=131.17  Aligned_cols=193  Identities=17%  Similarity=0.182  Sum_probs=128.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEE-EcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|+++|++|+++ .|+........     ..+.....++.++.+|+.|.+++.++++..     ++|
T Consensus         7 TGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (244)
T 1edo_A            7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVS-----KQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999995 67654321110     111112346888999999999998888642     699


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +|||+||...                    .++.++++++    .  +..++|++||...+...           .+...
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  150 (244)
T 1edo_A           82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN-----------IGQAN  150 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTCHH
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC-----------CCCcc
Confidence            9999998632                    1223334432    2  56799999998654221           11223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      | .+|...+.+.+       ..+++++++|||.++++.... +............+.         ..+++.+|+|++++
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~  220 (244)
T 1edo_A          151 YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGTIPL---------GRTGQPENVAGLVE  220 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCHHHHHHHHTSCTT---------CSCBCHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh-cChHHHHHHhhcCCC---------CCCCCHHHHHHHHH
Confidence            4 89998776653       358999999999998873211 112222222222111         24678999999999


Q ss_pred             HHHcCCc---cCCceEEecCCc
Q 023110          201 QVLGNEK---ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~---~~~~~~~i~~~~  219 (287)
                      .++..+.   ..|+.|++.++.
T Consensus       221 ~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          221 FLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHhCCCccCCcCCCEEEeCCCc
Confidence            9984432   258899998874

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.72  E-value=4.8e-17  Score=132.40  Aligned_cols=199  Identities=14%  Similarity=0.189  Sum_probs=133.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+.+.    ........++.++.+|+.|.+++.++++..     ++|+
T Consensus        13 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   88 (264)
T 3i4f_A           13 TAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMK----ETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDF   88 (264)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999888654322211    111112357899999999999998888743     7999


Q ss_pred             EEecCCCC----------------------cccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           76 VYDINGRE----------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~----------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      |||+||..                      +.++..+++++    +  +..++|++||...++...         ..+..
T Consensus        89 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------~~~~~  159 (264)
T 3i4f_A           89 LINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPG---------WIYRS  159 (264)
T ss_dssp             EECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCC---------CTTCH
T ss_pred             EEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCC---------CCCCc
Confidence            99999931                      11233444443    3  667999999875532211         12223


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      .| .+|...+.+.+       ..++++..++||.++++..... ............         ....+.+.+|+|+++
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~---------p~~r~~~~~dva~~v  229 (264)
T 3i4f_A          160 AFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT-IQEARQLKEHNT---------PIGRSGTGEDIARTI  229 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC-HHHHHHC-----------------CCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc-cHHHHHHHhhcC---------CCCCCcCHHHHHHHH
Confidence            44 89998887653       3689999999999998853221 222111111111         122457899999999


Q ss_pred             HHHHcCCc--cCCceEEecCCcccC
Q 023110          200 VQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      +.++....  ..|+.+++.++....
T Consensus       230 ~~l~s~~~~~itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          230 SFLCEDDSDMITGTIIEVTGAVDVI  254 (264)
T ss_dssp             HHHHSGGGTTCCSCEEEESCSCCCC
T ss_pred             HHHcCcccCCCCCcEEEEcCceeec
Confidence            99997543  368999999986543

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.71  E-value=1.1e-16  Score=130.79  Aligned_cols=195  Identities=13%  Similarity=0.119  Sum_probs=128.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc------CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~------~~~d   74 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..     ..+.....++.++.+|+.|++++.++++.      .++|
T Consensus        27 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id  101 (273)
T 1ae1_A           27 TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL-----EIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN  101 (273)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred             ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            799999999999999999999999999865422111     11111134688999999999988887753      3799


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      ++||+||...                    .++..+++++    +  +..++|++||...+...           .+...
T Consensus       102 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~  170 (273)
T 1ae1_A          102 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL-----------PSVSL  170 (273)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC-----------CCcch
Confidence            9999998631                    1223344433    2  56799999998876421           12223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-----hHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      | .+|...+.+.+       ..++++.+++||.++++......     ............+.         ..+.+.+|+
T Consensus       171 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dv  241 (273)
T 1ae1_A          171 YSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM---------GRAGKPQEV  241 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT---------CSCBCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC---------CCCcCHHHH
Confidence            4 89998887653       34899999999999988522110     01111222211111         136789999


Q ss_pred             HHHHHHHHcCCc--cCCceEEecCCcc
Q 023110          196 ARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      |++++.++....  ..|+.+++.++..
T Consensus       242 A~~v~~l~s~~~~~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          242 SALIAFLCFPAASYITGQIIWADGGFT  268 (273)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhCccccCcCCCEEEECCCcc
Confidence            999999886432  3688999998854

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.71  E-value=9.9e-17  Score=130.44  Aligned_cols=183  Identities=17%  Similarity=0.157  Sum_probs=126.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+...                ..++.++.+|+.|.+++.++++..     ++|+
T Consensus        14 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   77 (264)
T 2dtx_A           14 TGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISV   77 (264)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654                246788999999999988887642     6999


Q ss_pred             EEecCCCCc--------------------cc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+||...                    .+    ++.++..+.  +..++|++||...+...           .+...|
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  146 (264)
T 2dtx_A           78 LVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT-----------KNASAY  146 (264)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC-----------TTBHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC-----------CCchhH
Confidence            999998632                    12    223334443  56799999998765321           122334


Q ss_pred             -hhhHHHHHHhhh----C--CCcEEEEecCeeecCCCCCChh-------H----HHHHHHHcCCCccCCCCCCceeeeee
Q 023110          130 -KGKLNTESVLES----K--GVNWTSLRPVYIYGPLNYNPVE-------E----WFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       130 -~~k~~~E~~~~~----~--~~~~~ilR~~~v~g~~~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                       .+|...+.+.+.    .  .+++.+++||.+.++.... ..       .    ..........         ....+++
T Consensus       147 ~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~~  216 (264)
T 2dtx_A          147 VTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRK-AAELEVGSDPMRIEKKISEWGHEH---------PMQRIGK  216 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHH-HHHHHHCSCHHHHHHHHHHHHHHS---------TTSSCBC
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhh-hhhcccccCchhhHHHHHHHHhcC---------CCCCCcC
Confidence             899998876631    1  1899999999987752100 00       0    0111111111         1124788


Q ss_pred             HHHHHHHHHHHHcCCc--cCCceEEecCCcc
Q 023110          192 VKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       192 ~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      ++|+|++++.++....  ..|+.+++.++..
T Consensus       217 p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (264)
T 2dtx_A          217 PQEVASAVAFLASREASFITGTCLYVDGGLS  247 (264)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHhCchhcCCCCcEEEECCCcc
Confidence            9999999999986532  3688999988753

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.71  E-value=7.4e-17  Score=132.26  Aligned_cols=212  Identities=14%  Similarity=0.137  Sum_probs=136.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCCh-------hhhhhhcCCeEEEEecCCChHHHHhhhhcC--
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--   71 (287)
                      |||+|+||++++++|+++|++|++++|+.............       ..+......+.++++|+.|.+++.++++..  
T Consensus        19 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   98 (278)
T 3sx2_A           19 TGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLD   98 (278)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999999974321100000000       111222467899999999999998888643  


Q ss_pred             ---CccEEEecCCCCc----------------ccHHHHHHh----CC--C-CccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           72 ---GFDVVYDINGREA----------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        72 ---~~d~vi~~a~~~~----------------~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                         ++|++||+||...                .++..++++    +.  + ..++|++||...+....       .+..+
T Consensus        99 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------~~~~~  171 (278)
T 3sx2_A           99 ELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG-------SADPG  171 (278)
T ss_dssp             HHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC-------CSSHH
T ss_pred             HcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc-------cCCCC
Confidence               7999999999742                123334444    22  2 46899999987643211       01112


Q ss_pred             Ccch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHH-HHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ...| .+|...+.+.+       ..++++..++||.+.++............ ............+... ..+++.+|+|
T Consensus       172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA  250 (278)
T 3sx2_A          172 SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVA  250 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHH
T ss_pred             chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHH
Confidence            2234 89998887653       35799999999999998643322222221 1222222222233223 5788999999


Q ss_pred             HHHHHHHcCCc--cCCceEEecCCcc
Q 023110          197 RAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      ++++.++....  ..|+.+++.++..
T Consensus       251 ~~v~~l~s~~~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          251 NAVAWLVSDQARYITGVTLPVDAGFL  276 (278)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHhCcccccccCCEEeECCCcc
Confidence            99999986532  3788999998753

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.71  E-value=1.7e-16  Score=128.07  Aligned_cols=192  Identities=14%  Similarity=0.058  Sum_probs=121.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+...     .          ..++.++.+|+.|.+++.++++..     ++|+
T Consensus        13 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   77 (250)
T 2fwm_X           13 TGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----E----------QYPFATEVMDVADAAQVAQVCQRLLAETERLDA   77 (250)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----S----------CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----h----------cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998642     1          123788999999999998887642     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++..+++++    +  +..++|++||...+..           ..+...|
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  146 (250)
T 2fwm_X           78 LVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTP-----------RIGMSAY  146 (250)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------CTTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC-----------CCCCchH
Confidence            999998631                    1223344443    3  5689999999876431           1122334


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChh-HHHHH-HHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                       .+|...+.+.+       ..++++++++||.++++....... ..... .......  ..........+.+.+|+|+++
T Consensus       147 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~p~dvA~~v  224 (250)
T 2fwm_X          147 GASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGE--QFKLGIPLGKIARPQEIANTI  224 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhh--cccccCCCCCCcCHHHHHHHH
Confidence             89998887663       358999999999999875221100 00000 0000000  000001112467899999999


Q ss_pred             HHHHcCCc--cCCceEEecCCcc
Q 023110          200 VQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      +.++....  ..|+.+++.++..
T Consensus       225 ~~l~s~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          225 LFLASDLASHITLQDIVVDGGST  247 (250)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHhCccccCCCCCEEEECCCcc
Confidence            99986532  3688999988754

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.71  E-value=4.8e-17  Score=134.23  Aligned_cols=200  Identities=14%  Similarity=0.038  Sum_probs=132.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|+||++++++|+++|++|++++|+..........        ...++.++.+|+.|.+++.++++.. ++|++||+
T Consensus        22 TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n   93 (291)
T 3rd5_A           22 TGANSGLGAVTARELARRGATVIMAVRDTRKGEAAART--------MAGQVEVRELDLQDLSSVRRFADGVSGADVLINN   93 (291)
T ss_dssp             ECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT--------SSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--------hcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            79999999999999999999999999987653222211        1357899999999999999999865 78999999


Q ss_pred             CCCC------------------cccHHHHHHhCC--CCccEEEEecceeeccCCC-CCCC-CCCCCCCCcch-hhhHHHH
Q 023110           80 NGRE------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL-LPHC-ETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        80 a~~~------------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~-~~~~-e~~~~~~~~~~-~~k~~~E  136 (287)
                      ||..                  ..++..+++++.  ..+++|++||...+..... .... +..+..+...| .+|...+
T Consensus        94 Ag~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~  173 (291)
T 3rd5_A           94 AGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANL  173 (291)
T ss_dssp             CCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHH
T ss_pred             CcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHH
Confidence            9963                  223555666654  3469999999887643221 1111 21223333445 9999888


Q ss_pred             HHhh-------hCC--CcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCc
Q 023110          137 SVLE-------SKG--VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       137 ~~~~-------~~~--~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (287)
                      .+.+       ..+  +++..++||.+..+..... ...+..... ..        -..+-..+.+|+|++++.++..+.
T Consensus       174 ~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~-~~~~~~~~~-~~--------~~~~~~~~~~~~A~~~~~l~~~~~  243 (291)
T 3rd5_A          174 LFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS-GRKLGDALM-SA--------ATRVVATDADFGARQTLYAASQDL  243 (291)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------------CHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc-chHHHHHHH-HH--------HHHHHhCCHHHHHHHHHHHHcCCC
Confidence            7653       234  9999999999987642111 011111100 00        011223458999999999998766


Q ss_pred             cCCceEEecCC
Q 023110          208 ASRQVFNISGE  218 (287)
Q Consensus       208 ~~~~~~~i~~~  218 (287)
                      ..|+.+.+.++
T Consensus       244 ~~G~~~~vdgG  254 (291)
T 3rd5_A          244 PGDSFVGPRFG  254 (291)
T ss_dssp             CTTCEEEETTS
T ss_pred             CCCceeCCccc
Confidence            67878887654

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.71  E-value=2.8e-17  Score=133.50  Aligned_cols=197  Identities=13%  Similarity=0.129  Sum_probs=132.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..     ..+......+.++.+|+.|.+++.++++..     ++|+
T Consensus        20 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   94 (260)
T 2zat_A           20 TASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTV-----ATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDI   94 (260)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     111111346888999999999888877642     7999


Q ss_pred             EEecCCCCc---------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||...                     .++.+++++    ++  +..++|++||...+...           .+...
T Consensus        95 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  163 (260)
T 2zat_A           95 LVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF-----------PNLGP  163 (260)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTBHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC-----------CCchh
Confidence            999998631                     112223333    32  56799999998876321           12233


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChh-HHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      | .+|...+.+.+       ..++++.+++||.+.++....... ..........  .       ....+.+.+|+|+++
T Consensus       164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~dva~~v  234 (260)
T 2zat_A          164 YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKES--L-------RIRRLGNPEDCAGIV  234 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHH--H-------TCSSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhc--C-------CCCCCCCHHHHHHHH
Confidence            4 89998887763       348999999999998874211000 0000111110  1       112467899999999


Q ss_pred             HHHHcCCc--cCCceEEecCCcccC
Q 023110          200 VQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      +.++....  ..|+.+++.++...|
T Consensus       235 ~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          235 SFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHcCcccCCccCCEEEECCCcccc
Confidence            99986543  268899999987665

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.71  E-value=1.2e-16  Score=129.88  Aligned_cols=196  Identities=18%  Similarity=0.200  Sum_probs=133.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh-cCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+...     .+... ..++.++++|+.|++++.++++..     ++|
T Consensus        16 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   90 (262)
T 3pk0_A           16 TGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVA-----DLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGID   90 (262)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999998765321111     11111 147899999999999988887643     799


Q ss_pred             EEEecCCCCc--------------------ccHHHHHH----hCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREA--------------------DEVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~----~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      ++||+||...                    .++..+++    .+.  +..++|++||......          ...+...
T Consensus        91 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~----------~~~~~~~  160 (262)
T 3pk0_A           91 VVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT----------GYPGWSH  160 (262)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTB----------CCTTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC----------CCCCChh
Confidence            9999998631                    12223333    333  5679999999764200          1112233


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      | .+|...+.+.+       ..++++..++||.++++.... .............+.         ..+.+.+|+|++++
T Consensus       161 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~p~dva~~v~  230 (262)
T 3pk0_A          161 YGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE-NGEEYIASMARSIPA---------GALGTPEDIGHLAA  230 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT-TCHHHHHHHHTTSTT---------SSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            4 99999887663       368999999999998874211 112233333333222         13567899999999


Q ss_pred             HHHcCCc--cCCceEEecCCccc
Q 023110          201 QVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~~  221 (287)
                      .++....  ..|+.+++.++..+
T Consensus       231 ~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          231 FLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHhCccccCCcCCEEEECCCeec
Confidence            9986542  37889999998654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.71  E-value=6.1e-17  Score=133.36  Aligned_cols=219  Identities=16%  Similarity=0.140  Sum_probs=137.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCCh-------hhhhhhcCCeEEEEecCCChHHHHhhhhcC--
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--   71 (287)
                      |||+|+||++++++|+++|++|++++|+.............       ........++.++.+|+.|.+++.+++++.  
T Consensus        16 TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   95 (287)
T 3pxx_A           16 TGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVA   95 (287)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999999974331111100000       111122457899999999999988887643  


Q ss_pred             ---CccEEEecCCCCc------------------ccHHHHHHhC----CCCccEEEEecceeeccCCCCCCCCCCCCCCC
Q 023110           72 ---GFDVVYDINGREA------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        72 ---~~d~vi~~a~~~~------------------~~~~~ll~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (287)
                         ++|++||+||...                  .++.++++++    .+..++|++||...+......+..+..+..+.
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  175 (287)
T 3pxx_A           96 EFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGG  175 (287)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-----CHHHH
T ss_pred             HcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccccCCCcc
Confidence               7999999999732                  1233444443    24468999999877654322233333322233


Q ss_pred             cch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcC---CCc-----cCCCCCCceeeee
Q 023110          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RPI-----PIPGSGIQVTQLG  190 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~i  190 (287)
                      ..| .+|...+.+.+       ..++++..++||.+.++.......   .......   ...     ...........+.
T Consensus       176 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (287)
T 3pxx_A          176 AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPM---YRQFRPDLEAPSRADALLAFPAMQAMPTPYV  252 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHH---HHHHCTTSSSCCHHHHHHHGGGGCSSSCSCB
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccch---hhhhccccccchhHHHHhhhhhhcccCCCCC
Confidence            335 89998887653       348999999999999885322110   0011000   000     0000001114678


Q ss_pred             eHHHHHHHHHHHHcCC--ccCCceEEecCCcccC
Q 023110          191 HVKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (287)
Q Consensus       191 ~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (287)
                      +++|+|++++.++...  ...|+.+++.++..++
T Consensus       253 ~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          253 EASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             CHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            9999999999998643  2378899999987554

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.71  E-value=1.4e-16  Score=129.14  Aligned_cols=197  Identities=14%  Similarity=0.141  Sum_probs=133.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEE-EcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|+++|++|+++ .|+.....+..     ..+.....++.++.+|+.|.+++.++++..     ++|
T Consensus        10 TGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (258)
T 3oid_A           10 TGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETA-----EEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLD   84 (258)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999997 66654321111     111112357899999999999998888743     689


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      ++||+||...                    .++..++++    +.  +..++|++||...+..           ..+...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~  153 (258)
T 3oid_A           85 VFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY-----------LENYTT  153 (258)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB-----------CTTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC-----------CCCcHH
Confidence            9999998631                    123333333    22  5579999999876432           112234


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      | .+|...+.+.+       ..++++..++||.+.++..... .............+.         ..+.+.+|+|+++
T Consensus       154 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~v  224 (258)
T 3oid_A          154 VGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPA---------GRMVEIKDMVDTV  224 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTT---------SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence            4 99998887663       3479999999999988742111 111222232222222         2356799999999


Q ss_pred             HHHHcCCc--cCCceEEecCCcccC
Q 023110          200 VQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      +.++....  ..|+.+++.++....
T Consensus       225 ~~L~s~~~~~itG~~i~vdGG~~~~  249 (258)
T 3oid_A          225 EFLVSSKADMIRGQTIIVDGGRSLL  249 (258)
T ss_dssp             HHHTSSTTTTCCSCEEEESTTGGGB
T ss_pred             HHHhCcccCCccCCEEEECCCccCC
Confidence            99987643  378999999987543

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.71  E-value=9.7e-17  Score=130.54  Aligned_cols=195  Identities=17%  Similarity=0.188  Sum_probs=132.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.....+..     ..+.....++.++++|+.|.+++.++++..     ++|+
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   91 (264)
T 3ucx_A           17 SGVGPALGTTLARRCAEQGADLVLAARTVERLEDVA-----KQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDV   91 (264)
T ss_dssp             ESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            799999999999999999999999999865532111     111122357899999999999988887643     7999


Q ss_pred             EEecCCCC---------------------cccHHHHHHhCC-----CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGRE---------------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~---------------------~~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||..                     ..++..+++++.     +..++|++||...+...           .+...|
T Consensus        92 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  160 (264)
T 3ucx_A           92 VINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQ-----------AKYGAY  160 (264)
T ss_dssp             EEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCC-----------TTCHHH
T ss_pred             EEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCC-----------CccHHH
Confidence            99999762                     112333444432     23699999998765321           122234


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh----------hHHHHHHHHcCCCccCCCCCCceeeeee
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                       .+|...+.+.+       ..++++..++||.+++|.....+          ...+........+         ...+.+
T Consensus       161 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~  231 (264)
T 3ucx_A          161 KMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSD---------LKRLPT  231 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSS---------SSSCCB
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCC---------cccCCC
Confidence             89998887653       36899999999999887311000          0111222222221         234678


Q ss_pred             HHHHHHHHHHHHcCCc--cCCceEEecCCcc
Q 023110          192 VKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       192 ~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      .+|+|++++.++....  ..|+.+++.++..
T Consensus       232 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          232 EDEVASAILFMASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            9999999999986532  3788999998864

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.71  E-value=1.5e-16  Score=130.81  Aligned_cols=193  Identities=17%  Similarity=0.240  Sum_probs=128.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+........     ..+.....++.++.+|+.|.+++.++++.     .++|+
T Consensus        50 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~  124 (285)
T 2c07_A           50 TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV-----DEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI  124 (285)
T ss_dssp             ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----HHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999888765421111     01111134688999999999999888753     26999


Q ss_pred             EEecCCCCc--------------------cc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+||...                    .+    ++.++..+.  +..++|++||...+....           +...|
T Consensus       125 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~Y  193 (285)
T 2c07_A          125 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV-----------GQANY  193 (285)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------TCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC-----------CCchH
Confidence            999998632                    12    222333333  568999999986643211           12234


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                       .+|...|.+.+       ..++++++++||.+.++.... .............+.         ..+++++|+|++++.
T Consensus       194 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dvA~~~~~  263 (285)
T 2c07_A          194 SSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNIPA---------GRMGTPEEVANLACF  263 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTT---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh-cCHHHHHHHHhhCCC---------CCCCCHHHHHHHHHH
Confidence             89998877653       358999999999998874321 112222222222111         136889999999999


Q ss_pred             HHcCCc--cCCceEEecCCc
Q 023110          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++....  ..|+.+++.++.
T Consensus       264 l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          264 LSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCCCcCCCCCCEEEeCCCc
Confidence            987543  368899998874

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.70  E-value=8.4e-17  Score=130.37  Aligned_cols=197  Identities=15%  Similarity=0.180  Sum_probs=132.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.....+...     .+.....++.++.+|+.|.+++.++++..     ++|+
T Consensus        12 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   86 (257)
T 3imf_A           12 TGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKL-----EIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDI   86 (257)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765321110     11111357889999999999988887643     7899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----C-C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEPILDA----L-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||...                    .++..+.++    + +  +..++|++||...+...           .....
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  155 (257)
T 3imf_A           87 LINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG-----------PGVIH  155 (257)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC-----------TTCHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC-----------CCcHH
Confidence            999998631                    122333333    2 2  35789999998764321           12223


Q ss_pred             h-hhhHHHHHHhh--------hCCCcEEEEecCeeecCCCCCCh--hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          129 H-KGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       129 ~-~~k~~~E~~~~--------~~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      | .+|...+.+.+        ..++++..++||.+.++......  ...+........+         ...+.+.+|+|+
T Consensus       156 Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~  226 (257)
T 3imf_A          156 SAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVP---------LGRLGTPEEIAG  226 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTST---------TCSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCC---------CCCCcCHHHHHH
Confidence            4 88988776552        34899999999999987532111  0111111111111         124678999999


Q ss_pred             HHHHHHcCCc--cCCceEEecCCcccC
Q 023110          198 AFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      +++.++....  ..|+.+++.++..++
T Consensus       227 ~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          227 LAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             HHHHHcCchhcCccCCEEEECCCcccC
Confidence            9999986543  378899999987654

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.70  E-value=1.3e-16  Score=130.73  Aligned_cols=200  Identities=16%  Similarity=0.151  Sum_probs=135.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.....+...     .+......+.++.+|+.|.+++.++++..     ++|+
T Consensus        14 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   88 (280)
T 3tox_A           14 TGASSGIGRAAALLFAREGAKVVVTARNGNALAELTD-----EIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDT   88 (280)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHH-----HHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765321110     11111357889999999999988887642     7999


Q ss_pred             EEecCCCCc---------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||...                     .++..++++    +.  +..++|++||...+..          ...+...
T Consensus        89 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~~~~  158 (280)
T 3tox_A           89 AFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA----------GFAGVAP  158 (280)
T ss_dssp             EEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB----------CCTTCHH
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC----------CCCCchh
Confidence            999998531                     112233333    22  4569999999776421          1112233


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC---ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      | .+|...+.+.+       ..++++..++||.+.+|....   ..............++         ..+.+++|+|+
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~  229 (280)
T 3tox_A          159 YAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHAL---------KRIARPEEIAE  229 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTT---------SSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCcc---------CCCcCHHHHHH
Confidence            4 99998887653       358999999999999885321   1112222222222221         23677999999


Q ss_pred             HHHHHHcCCc--cCCceEEecCCcccCHH
Q 023110          198 AFVQVLGNEK--ASRQVFNISGEKYVTFD  224 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~s~~  224 (287)
                      +++.++....  ..|+.+++.++..++..
T Consensus       230 ~v~~L~s~~a~~itG~~i~vdGG~~~~~~  258 (280)
T 3tox_A          230 AALYLASDGASFVTGAALLADGGASVTKA  258 (280)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGCC-
T ss_pred             HHHHHhCccccCCcCcEEEECCCcccccc
Confidence            9999987543  36899999999876543

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.70  E-value=4.5e-16  Score=127.39  Aligned_cols=194  Identities=15%  Similarity=0.190  Sum_probs=132.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..        .+....+.++.+|+.|.+++.++++..     ++|+
T Consensus        33 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           33 TGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVA--------NEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865522111        112357889999999999988888643     7999


Q ss_pred             EEecCCCCc--------------------ccHH----HHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVE----PILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~----~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++.    .++..++  +..++|++||...+..           ..+...|
T Consensus       105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  173 (277)
T 4dqx_A          105 LVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSA-----------IADRTAY  173 (277)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSC-----------CTTBHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcC-----------CCCChhH
Confidence            999999631                    1222    3334444  4569999999876532           1222334


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCC-----CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                       .+|...+.+.+       ..++++..++||.+.++...     ...............+         ...+.+++|+|
T Consensus       174 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---------~~r~~~pedvA  244 (277)
T 4dqx_A          174 VASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAV---------MDRMGTAEEIA  244 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTST---------TCSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCc---------ccCCcCHHHHH
Confidence             99998887653       35899999999999776200     0000111111222111         22456799999


Q ss_pred             HHHHHHHcCCc--cCCceEEecCCcccC
Q 023110          197 RAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      ++++.++....  ..|+.+++.++..++
T Consensus       245 ~~v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          245 EAMLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             HHHHHHhCCccCCCcCCEEEECCchhhh
Confidence            99999986543  378999999987554

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.70  E-value=2.9e-16  Score=126.35  Aligned_cols=193  Identities=16%  Similarity=0.217  Sum_probs=129.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEc-CCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|+++|++|++++| +.....+ +.    ..+.....++.++.+|+.|++++.++++..     ++|
T Consensus        10 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   84 (246)
T 2uvd_A           10 TGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANE-VV----DEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVD   84 (246)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-HH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH-HH----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999 4433111 10    111111346889999999999998887642     799


Q ss_pred             EEEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      ++||+||....                    +    ++.++..+.  +..++|++||...+...           .+...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  153 (246)
T 2uvd_A           85 ILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN-----------PGQAN  153 (246)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTBHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC-----------CCCch
Confidence            99999986321                    1    233444443  56899999998654321           11223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      | .+|...+.+.+       ..++++++++||.+.++.... .............+.         ..+++.+|+|++++
T Consensus       154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~~~~~dvA~~~~  223 (246)
T 2uvd_A          154 YVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDV-LDENIKAEMLKLIPA---------AQFGEAQDIANAVT  223 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSC-CCTTHHHHHHHTCTT---------CSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhh-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            4 88988776642       458999999999998874221 111111222221111         23678999999999


Q ss_pred             HHHcCCc--cCCceEEecCCc
Q 023110          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (287)
                      .++....  ..|+.+++.++.
T Consensus       224 ~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          224 FFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HHHSGGGTTCCSCEEEESTTS
T ss_pred             HHcCchhcCCCCCEEEECcCc
Confidence            9986532  368899998874

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.70  E-value=1.3e-16  Score=130.43  Aligned_cols=196  Identities=18%  Similarity=0.197  Sum_probs=122.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|+++.+......+.+.    ..+......+.++.+|+.|.+++.++++..     ++|+
T Consensus        32 TGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  107 (272)
T 4e3z_A           32 TGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVV----AAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDG  107 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHH----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            7999999999999999999999887544332121111    111222357889999999999998887743     7899


Q ss_pred             EEecCCCCcc---------------------cHHHHHH----hCC-----CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           76 VYDINGREAD---------------------EVEPILD----ALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        76 vi~~a~~~~~---------------------~~~~ll~----~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |||+||....                     ++..+++    .+.     +..++|++||...+.....         ..
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------~~  178 (272)
T 4e3z_A          108 LVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT---------QY  178 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT---------TC
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC---------Cc
Confidence            9999986321                     1222322    222     2458999999776532110         11


Q ss_pred             CcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      ..|..+|..++.+.+       ..++++..++||.+.++..................+         ...+.+++|+|++
T Consensus       179 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~edvA~~  249 (272)
T 4e3z_A          179 VDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVP---------MQRAGMPEEVADA  249 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCT---------TSSCBCHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCC---------cCCCcCHHHHHHH
Confidence            124499998887653       348999999999999875322111111112111111         1235679999999


Q ss_pred             HHHHHcCCc--cCCceEEecCC
Q 023110          199 FVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~  218 (287)
                      ++.++....  ..|+.|++.++
T Consensus       250 i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          250 ILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCCccccccCCEEeecCC
Confidence            999986533  36889999876

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.70  E-value=5e-16  Score=126.57  Aligned_cols=185  Identities=15%  Similarity=0.191  Sum_probs=128.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+....               ...+..+.+|+.|.+++.++++..     ++|+
T Consensus        20 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           20 TGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD---------------VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCC--C---------------TTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc---------------cCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999987652               135678999999999988887643     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++..++++    +.  +..++|++||...+....           ....|
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y  153 (269)
T 3vtz_A           85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATK-----------NAAAY  153 (269)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT-----------TCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCC-----------CChhH
Confidence            999998731                    122233333    32  567999999988764321           12234


Q ss_pred             -hhhHHHHHHhh----h--CCCcEEEEecCeeecCCCC----------CChhHHHHHHHHcCCCccCCCCCCceeeeeeH
Q 023110          130 -KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (287)
Q Consensus       130 -~~k~~~E~~~~----~--~~~~~~ilR~~~v~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (287)
                       .+|..++.+.+    +  .++++..++||.+.++...          ...............+         ...+.+.
T Consensus       154 ~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p  224 (269)
T 3vtz_A          154 VTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHP---------MGRIGRP  224 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHST---------TSSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCC---------CCCCcCH
Confidence             99999887763    2  2799999999999876310          0000111112211111         1245679


Q ss_pred             HHHHHHHHHHHcCCc--cCCceEEecCCcc
Q 023110          193 KDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       193 ~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      +|+|++++.++....  ..|+.+++.++..
T Consensus       225 edvA~~v~~L~s~~~~~itG~~i~vdGG~~  254 (269)
T 3vtz_A          225 EEVAEVVAFLASDRSSFITGACLTVDGGLL  254 (269)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHhCCccCCCcCcEEEECCCcc
Confidence            999999999986542  3688999999864

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.70  E-value=2.4e-17  Score=135.08  Aligned_cols=193  Identities=20%  Similarity=0.257  Sum_probs=128.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..     ..+.....++.++.+|+.|.+++.++++..     ++|+
T Consensus        28 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (277)
T 2rhc_B           28 TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL-----KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV  102 (277)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865422111     111111346889999999999888877642     6999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh------CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           76 VYDINGREA--------------------DEVEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~------~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      |||+||...                    .++.+++++      +.  +..++|++||...+..           ..+..
T Consensus       103 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~  171 (277)
T 2rhc_B          103 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG-----------VVHAA  171 (277)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC-----------CTTCH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC-----------CCCCc
Confidence            999998631                    122233333      22  3479999999765421           11222


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChh-----------HHHHHHHHcCCCccCCCCCCceee
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-----------EWFFHRLKAGRPIPIPGSGIQVTQ  188 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  188 (287)
                      .| .+|..++.+.+       ..++++++++||.+.++.... ..           ...........         ....
T Consensus       172 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r  241 (277)
T 2rhc_B          172 PYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS-VREHYSDIWEVSTEEAFDRITARV---------PIGR  241 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHH-HHHHHHHHHTCCHHHHHHHHHHHS---------TTSS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhh-hhhhcccccccchHHHHHHHHhcC---------CCCC
Confidence            34 89998887653       247999999999998863110 00           00011111111         1124


Q ss_pred             eeeHHHHHHHHHHHHcCCc--cCCceEEecCCc
Q 023110          189 LGHVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       189 ~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      +++.+|+|++++.++..+.  ..|+.+++.++.
T Consensus       242 ~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          242 YVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            7889999999999986542  368899998874

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.70  E-value=1.9e-16  Score=129.97  Aligned_cols=206  Identities=15%  Similarity=0.103  Sum_probs=131.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccccc-CCCCCh-------hhhhhhcCCeEEEEecCCChHHHHhhhhcC-
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ-LPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK-   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~-------~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-   71 (287)
                      |||+|+||++++++|+++|++|++++|+....... ......       ..+......+.++++|+.|.+++.++++.. 
T Consensus        21 TGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  100 (280)
T 3pgx_A           21 TGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADGM  100 (280)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            79999999999999999999999999853221000 000000       111112357889999999999998887643 


Q ss_pred             ----CccEEEecCCCCc--------------------ccHHHHHHh----CC--C-CccEEEEecceeeccCCCCCCCCC
Q 023110           72 ----GFDVVYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCET  120 (287)
Q Consensus        72 ----~~d~vi~~a~~~~--------------------~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~  120 (287)
                          ++|++||+||...                    .++..++++    +.  + ..++|++||...+...        
T Consensus       101 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  172 (280)
T 3pgx_A          101 EQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT--------  172 (280)
T ss_dssp             HHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC--------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC--------
Confidence                7999999999732                    123334443    22  2 5689999998764321        


Q ss_pred             CCCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHc-CCCccCCCCCCceeeeee
Q 023110          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-GRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       121 ~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~  191 (287)
                         .....| .+|...+.+.+       ..++++..++||.+.+|................ ...... .. .....+++
T Consensus       173 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~r~~~  247 (280)
T 3pgx_A          173 ---PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPP-MP-VQPNGFMT  247 (280)
T ss_dssp             ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCC-BT-TBCSSCBC
T ss_pred             ---CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhh-cc-cCCCCCCC
Confidence               122334 99998887653       368999999999999985322111111111000 011111 11 11124889


Q ss_pred             HHHHHHHHHHHHcCCc--cCCceEEecCCc
Q 023110          192 VKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       192 ~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++|+|++++.++....  ..|+.+++.++.
T Consensus       248 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          248 ADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             HHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             HHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            9999999999986543  368899998875

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.69  E-value=2.4e-16  Score=128.36  Aligned_cols=194  Identities=13%  Similarity=0.121  Sum_probs=126.6

Q ss_pred             CCccc-chHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh-hcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTR-FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG-~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+| .||++++++|+++|++|++++|+.....+...     .+.. ...++.++.+|+.|.+++.++++..     ++
T Consensus        28 TGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  102 (266)
T 3o38_A           28 TAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRD-----QLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRL  102 (266)
T ss_dssp             SSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHH-----HHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCC
Confidence            79998 59999999999999999999998765321111     1101 1257899999999999998888643     78


Q ss_pred             cEEEecCCCCc--------------------ccHHHHHHh----CC---CCccEEEEecceeeccCCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREA--------------------DEVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        74 d~vi~~a~~~~--------------------~~~~~ll~~----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (287)
                      |++||+||...                    .++.+++++    +.   +..++|++||...+..           ..+.
T Consensus       103 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~  171 (266)
T 3o38_A          103 DVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA-----------QHSQ  171 (266)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC-----------CTTC
T ss_pred             cEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC-----------CCCC
Confidence            99999999731                    122333333    22   3468999999776421           1223


Q ss_pred             cch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      ..| .+|...+.+.+       ..++++..++||.+.++...............         .......+.+.+|+|++
T Consensus       172 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~---------~~~~~~r~~~~~dva~~  242 (266)
T 3o38_A          172 SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLA---------SDEAFGRAAEPWEVAAT  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------------------CCTTSSCCCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHH---------hcCCcCCCCCHHHHHHH
Confidence            345 99998887663       36899999999999887422111111111111         11122346789999999


Q ss_pred             HHHHHcCCc--cCCceEEecCCc
Q 023110          199 FVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++.++....  ..|+.+++.++.
T Consensus       243 i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          243 IAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSCC
T ss_pred             HHHHcCccccCccCCEEEEcCCc
Confidence            999987532  368899998864

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.69  E-value=2.5e-16  Score=127.86  Aligned_cols=199  Identities=15%  Similarity=0.209  Sum_probs=128.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh--cCCeEEEEecCCChHHHHhhhhc----CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~----~~~d   74 (287)
                      |||+|+||++++++|+++|++|++++|+.....+...     .+...  ..++.++.+|+.|++++.++++.    .++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gid   87 (260)
T 2z1n_A           13 TAGSSGLGFASALELARNGARLLLFSRNREKLEAAAS-----RIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGAD   87 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999998654221110     11110  12688999999999988887762    2499


Q ss_pred             EEEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +|||+||....                    +    ++.+++.+.  +..++|++||...+...           .+...
T Consensus        88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  156 (260)
T 2z1n_A           88 ILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPW-----------QDLAL  156 (260)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTBHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCC-----------CCCch
Confidence            99999986311                    1    234444443  66899999998775321           12223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhH-----HHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-----WFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      | .+|...+.+.+       ..++++.+++||.++++.....+..     ........ ..+   ........+.+.+|+
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~p~~r~~~~~dv  232 (260)
T 2z1n_A          157 SNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEAL-KSM---ASRIPMGRVGKPEEL  232 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC---------------------------CCTTSSCCCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHH-HHH---HhcCCCCCccCHHHH
Confidence            4 88988877653       3589999999999998853210000     00000000 000   000011236789999


Q ss_pred             HHHHHHHHcCC--ccCCceEEecCCc
Q 023110          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      |++++.++...  ...|+.+++.++.
T Consensus       233 a~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          233 ASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHhCccccCCCCCEEEeCCCc
Confidence            99999998653  2368899998874

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.69  E-value=2.4e-16  Score=128.94  Aligned_cols=194  Identities=14%  Similarity=0.105  Sum_probs=131.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..        .+....+.++.+|+.|.+++.++++..     ++|+
T Consensus        35 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           35 TGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAA--------TKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             TTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865532111        112357889999999999888887643     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++..++++    +.  +..++|++||...+..           ..+...|
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y  175 (277)
T 3gvc_A          107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVA-----------VGGTGAY  175 (277)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------CTTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----------CCCchhH
Confidence            999999732                    122233333    32  5568999999775421           1222345


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCC--CccC-CCC---CCceeeeeeHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR--PIPI-PGS---GIQVTQLGHVKDL  195 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~--~~~~-~~~---~~~~~~~i~~~D~  195 (287)
                       .+|...+.+.+       ..++++..++||.+.+|.     ...    .....  .... ...   ......+.+.+|+
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-----~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~pedv  246 (277)
T 3gvc_A          176 GMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM-----QQT----AMAMFDGALGAGGARSMIARLQGRMAAPEEM  246 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-----HHH----HHTCC------CCHHHHHHHHHSSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch-----HHH----hhhcchhhHHHHhhhhhhhccccCCCCHHHH
Confidence             99998887663       368999999999998862     111    11100  0000 000   0011246789999


Q ss_pred             HHHHHHHHcCC--ccCCceEEecCCcccC
Q 023110          196 ARAFVQVLGNE--KASRQVFNISGEKYVT  222 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (287)
                      |++++.++...  ...|+.+++.++...+
T Consensus       247 A~~v~~L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          247 AGIVVFLLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHHHHHHcCCccCCccCcEEEECCcchhc
Confidence            99999998653  2378999999987654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.69  E-value=4.1e-16  Score=125.75  Aligned_cols=192  Identities=14%  Similarity=0.169  Sum_probs=125.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCC-ccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d   74 (287)
                      |||+|+||++++++|+++|++|++++|+. ....+        .+.....++.++.+|+.|++++.++++.     .++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A           13 TGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA--------AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH--------HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH--------HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999999987 43221        1111235688999999999988887653     2799


Q ss_pred             EEEecCCCCc--------------------cc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      ++||+||...                    .+    ++.++..++  +..++|++||...+...           .+...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  153 (249)
T 2ew8_A           85 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI-----------EAYTH  153 (249)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC-----------SSCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC-----------CCchh
Confidence            9999998631                    11    223333343  56899999998775321           12223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      | .+|...+.+.+       ..++++.+++||.+.++.......... .....  .+..     ....+.+.+|+|++++
T Consensus       154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~--~~~~-----~~~~~~~p~dva~~~~  225 (249)
T 2ew8_A          154 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM-FDVLP--NMLQ-----AIPRLQVPLDLTGAAA  225 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTTS-----SSCSCCCTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccch-hhHHH--HhhC-----ccCCCCCHHHHHHHHH
Confidence            4 89998887663       358999999999998874220110000 00000  1100     1124678999999999


Q ss_pred             HHHcCC--ccCCceEEecCCc
Q 023110          201 QVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~  219 (287)
                      .++...  ...|+.+++.++.
T Consensus       226 ~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          226 FLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             HHTSGGGTTCCSCEEEESSSC
T ss_pred             HHcCcccCCCCCcEEEECCCc
Confidence            998643  2368899998874

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.69  E-value=4.1e-17  Score=132.26  Aligned_cols=197  Identities=14%  Similarity=0.060  Sum_probs=122.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC--CccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--~~d~vi~   78 (287)
                      |||+|+||+++++.|+++|++|++++|+.....               .  . +.+|+.|.+++.++++..  ++|++||
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------~--~-~~~Dl~~~~~v~~~~~~~~~~id~lv~   68 (257)
T 1fjh_A            7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI---------------A--D-LSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------C--C-TTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc---------------c--c-cccCCCCHHHHHHHHHHhCCCCCEEEE
Confidence            799999999999999999999999999875521               1  1 568999999999988743  6799999


Q ss_pred             cCCCCc-------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCC-----------------CC
Q 023110           79 INGREA-------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCET-----------------DT  122 (287)
Q Consensus        79 ~a~~~~-------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~-----------------~~  122 (287)
                      +||...             .++..+++++    .  +..++|++||...+......+..+.                 .+
T Consensus        69 ~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (257)
T 1fjh_A           69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGE  148 (257)
T ss_dssp             CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCT
T ss_pred             CCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccC
Confidence            998753             1233344433    2  5589999999887732111000000                 11


Q ss_pred             CCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHH
Q 023110          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      ..+...| .+|...+.+.+       ..++++++++||.+.++.................-..       ....+++.+|
T Consensus       149 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~d  221 (257)
T 1fjh_A          149 QGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVP-------PMGRRAEPSE  221 (257)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCC-------STTSCCCTHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhccc-------ccCCCCCHHH
Confidence            1122334 89998887663       3589999999999988742211000010111100000       1123678999


Q ss_pred             HHHHHHHHHcCC--ccCCceEEecCCcccC
Q 023110          195 LARAFVQVLGNE--KASRQVFNISGEKYVT  222 (287)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (287)
                      +|++++.++..+  ...|+.+++.++...+
T Consensus       222 vA~~~~~l~~~~~~~~tG~~~~vdgG~~~~  251 (257)
T 1fjh_A          222 MASVIAFLMSPAASYVHGAQIVIDGGIDAV  251 (257)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHHHHHHhCchhcCCcCCEEEECCCcccc
Confidence            999999998754  3368899999886443

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.69  E-value=2.1e-16  Score=129.11  Aligned_cols=194  Identities=19%  Similarity=0.224  Sum_probs=129.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+.+.    ..+......+.++.+|+.|.+++.+++++.     ++|+
T Consensus        35 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (271)
T 4iin_A           35 TGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALK----NELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSY  110 (271)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999997554222111    111222357899999999999888887643     7999


Q ss_pred             EEecCCCCcc--------------------cHHH----HHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------EVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~----ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....                    ++..    ++..++  +..++|++||...+...           .+...|
T Consensus       111 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  179 (271)
T 4iin_A          111 LVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN-----------MGQTNY  179 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTCHHH
T ss_pred             EEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC-----------CCchHh
Confidence            9999997321                    1222    333333  55799999997764321           122334


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                       .+|...+.+.+       ..++++..++||.+.++....     +.......     .........+.+.+|+|++++.
T Consensus       180 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-----~~~~~~~~-----~~~~~~~~~~~~p~dvA~~i~~  249 (271)
T 4iin_A          180 SASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN-----LKDELKAD-----YVKNIPLNRLGSAKEVAEAVAF  249 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----------------------CGGGCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh-----hcHHHHHH-----HHhcCCcCCCcCHHHHHHHHHH
Confidence             99998887663       358999999999998773211     11111100     0111112346789999999999


Q ss_pred             HHcCCc--cCCceEEecCCc
Q 023110          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++....  ..|+.+++.++.
T Consensus       250 l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          250 LLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCCCcCCCcCCEEEeCCCe
Confidence            987543  378899998875

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.69  E-value=1.3e-16  Score=130.10  Aligned_cols=196  Identities=15%  Similarity=0.151  Sum_probs=132.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+......+.++.+|+.|.+++.++++..     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (270)
T 3ftp_A           34 TGASRGIGRAIALELARRGAMVIGTATTEAGAEGIG-----AAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNV  108 (270)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999865422111     111122357889999999999888887643     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++..+++++    .  +..++|++||...+...           .+...|
T Consensus       109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  177 (270)
T 3ftp_A          109 LVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN-----------PGQVNY  177 (270)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTBHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC-----------CCchhH
Confidence            999998632                    1233344432    2  55689999997765321           122334


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                       .+|...+.+.+       ..++++..++||.+.++.... +............+         ...+.+.+|+|++++.
T Consensus       178 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~  247 (270)
T 3ftp_A          178 AAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG-LPQEQQTALKTQIP---------LGRLGSPEDIAHAVAF  247 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH-SCHHHHHHHHTTCT---------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh-cCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHH
Confidence             99998876653       358999999999998762110 11112222222221         1246789999999999


Q ss_pred             HHcCC--ccCCceEEecCCcccC
Q 023110          202 VLGNE--KASRQVFNISGEKYVT  222 (287)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~~s  222 (287)
                      ++...  ...|+.+++.++..+|
T Consensus       248 L~s~~~~~itG~~i~vdGG~~~s  270 (270)
T 3ftp_A          248 LASPQAGYITGTTLHVNGGMFMS  270 (270)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSCC
T ss_pred             HhCCCcCCccCcEEEECCCcccC
Confidence            98543  2378899999986543

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.69  E-value=2.9e-16  Score=127.77  Aligned_cols=186  Identities=18%  Similarity=0.182  Sum_probs=128.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+....                .....+.+|+.|.+++..+++..     ++|+
T Consensus        34 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~----------------~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~   97 (266)
T 3uxy_A           34 TGAAGGIGGAVVTALRAAGARVAVADRAVAGI----------------AADLHLPGDLREAAYADGLPGAVAAGLGRLDI   97 (266)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS----------------CCSEECCCCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HhhhccCcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            79999999999999999999999999986552                12234579999998887776532     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++..+++++    +  +..++|++||...+..           ..+...|
T Consensus        98 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  166 (266)
T 3uxy_A           98 VVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP-----------GPGHALY  166 (266)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC-----------CTTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC-----------CCCChHH
Confidence            999999742                    1233344443    3  5679999999776422           1122334


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC------ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                       .+|..++.+.+       ..++++..++||.+.++....      ..............+         ...+.+++|+
T Consensus       167 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedv  237 (266)
T 3uxy_A          167 CLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVP---------LGRIAEPEDI  237 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTST---------TSSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCC---------CCCCcCHHHH
Confidence             99998887663       358999999999998863100      000111122222211         2346789999


Q ss_pred             HHHHHHHHcCCc--cCCceEEecCCcccC
Q 023110          196 ARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      |++++.++....  ..|+.+++.++..++
T Consensus       238 A~~v~~L~s~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          238 ADVVLFLASDAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence            999999987543  368899999987553

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.69  E-value=1.9e-16  Score=129.07  Aligned_cols=197  Identities=17%  Similarity=0.220  Sum_probs=131.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh--cCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..     ..+...  ..++.++.+|+.|.+++.++++..     ++
T Consensus        19 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   93 (267)
T 1iy8_A           19 TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASK-----AAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI   93 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999865422111     011111  246889999999999998887642     68


Q ss_pred             cEEEecCCCCcc---------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        74 d~vi~~a~~~~~---------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (287)
                      |++||+||....                     +    ++.+++.++  +..++|++||...+...           .+.
T Consensus        94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~  162 (267)
T 1iy8_A           94 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI-----------GNQ  162 (267)
T ss_dssp             SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC-----------SSB
T ss_pred             CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC-----------CCC
Confidence            999999986321                     0    223444443  56899999998764221           122


Q ss_pred             cch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-------ChhHHHHHHHHcCCCccCCCCCCceeeeee
Q 023110          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                      ..| .+|...+.+.+       ..++++.+++||.++++....       ..............+         ...+.+
T Consensus       163 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~  233 (267)
T 1iy8_A          163 SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP---------SKRYGE  233 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT---------TCSCBC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCC---------CCCCcC
Confidence            234 89998887653       358999999999998763100       000000001111111         123678


Q ss_pred             HHHHHHHHHHHHcCC--ccCCceEEecCCcccC
Q 023110          192 VKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (287)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (287)
                      .+|+|++++.++...  ...|+.+++.++..++
T Consensus       234 ~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          234 APEIAAVVAFLLSDDASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence            999999999998654  2368899999886543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.69  E-value=2.1e-16  Score=127.87  Aligned_cols=197  Identities=20%  Similarity=0.195  Sum_probs=134.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.....+.        ..+...++.++.+|+.|.+++.++++..     ++|+
T Consensus        14 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A           14 IGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARI--------REEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999986552211        1112357899999999999888777542     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-h
Q 023110           76 VYDINGREA--------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (287)
                      +||+||...                    .++..+++++.    ...++|++||...+...           .+...| .
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~a  154 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH-----------PGMSVYSA  154 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC-----------TTBHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC-----------CCchHHHH
Confidence            999998742                    12333444432    33589999998765321           122345 9


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhH----HHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEE----WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      +|...+.+.+       ..++++..++||.+.+|.... ....    .+........+.         ..+.+.+|+|++
T Consensus       155 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~  225 (255)
T 4eso_A          155 SKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM---------KRNGTADEVARA  225 (255)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT---------SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC---------CCCcCHHHHHHH
Confidence            9998887653       348999999999999885321 1111    111222221221         134579999999


Q ss_pred             HHHHHcC-CccCCceEEecCCcccCHHH
Q 023110          199 FVQVLGN-EKASRQVFNISGEKYVTFDG  225 (287)
Q Consensus       199 ~~~~~~~-~~~~~~~~~i~~~~~~s~~e  225 (287)
                      ++.++.. ....|+.+++.++...++.+
T Consensus       226 v~~L~s~~~~itG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          226 VLFLAFEATFTTGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             HHHHHHTCTTCCSCEEEESTTTTTTBCC
T ss_pred             HHHHcCcCcCccCCEEEECCCccccCcC
Confidence            9998865 22378899999987765443

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.69  E-value=3.8e-16  Score=127.05  Aligned_cols=190  Identities=16%  Similarity=0.226  Sum_probs=129.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.        ..+....+.++.+|+.|.+++.++++..     ++|+
T Consensus        33 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           33 TGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEI--------AADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999986553211        1122357899999999999988887642     7999


Q ss_pred             EEecCCCCc--------------------cc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .+    ++.++..+.  +..++|++||...+...           .+...|
T Consensus       105 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~-----------~~~~~Y  173 (266)
T 3grp_A          105 LVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN-----------PGQTNY  173 (266)
T ss_dssp             EEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------------------CHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC-----------CCchhH
Confidence            999999742                    12    233444443  56799999997764221           122234


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                       .+|...+.+.+       ..++++..++||.+.++.... .............++         ..+.+.+|+|++++.
T Consensus       174 ~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~~edvA~~v~~  243 (266)
T 3grp_A          174 CAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK-LNEKQKEAIMAMIPM---------KRMGIGEEIAFATVY  243 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT-CCHHHHHHHHTTCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             89998776653       358999999999998763111 112223333333222         235678999999999


Q ss_pred             HHcCCc--cCCceEEecCCc
Q 023110          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++....  ..|+.+++.++.
T Consensus       244 L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          244 LASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             HHSGGGTTCCSCEEEESTTC
T ss_pred             HhCccccCccCCEEEECCCe
Confidence            986543  368899998875

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.69  E-value=7.7e-16  Score=124.99  Aligned_cols=198  Identities=12%  Similarity=0.077  Sum_probs=132.4

Q ss_pred             CCcc--cchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+  |+||++++++|+++|++|++++|+... .+.+     ..+......+.++.+|+.|++++.++++..     ++
T Consensus        14 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (261)
T 2wyu_A           14 MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERL-RPEA-----EKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL   87 (261)
T ss_dssp             ESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGG-HHHH-----HHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHH-----HHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            7998  999999999999999999999998641 1111     111111134789999999999988887643     68


Q ss_pred             cEEEecCCCCcc------------------------cHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |+|||+||....                        ++.++++++.    ...++|++||...+...           .+
T Consensus        88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~  156 (261)
T 2wyu_A           88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV-----------PK  156 (261)
T ss_dssp             EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC-----------TT
T ss_pred             CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC-----------CC
Confidence            999999986421                        2334555544    13589999997664221           12


Q ss_pred             Ccch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ...| .+|...+.+.+       ..++++.+++||.++++..... ....+........++         ..+.+++|+|
T Consensus       157 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva  227 (261)
T 2wyu_A          157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL---------RRNITQEEVG  227 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            2234 89998887663       3489999999999998853211 112222222222222         1246799999


Q ss_pred             HHHHHHHcCCc--cCCceEEecCCcccCHH
Q 023110          197 RAFVQVLGNEK--ASRQVFNISGEKYVTFD  224 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~s~~  224 (287)
                      ++++.++....  ..|+.+++.++..++..
T Consensus       228 ~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~  257 (261)
T 2wyu_A          228 NLGLFLLSPLASGITGEVVYVDAGYHIMGM  257 (261)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGBC-
T ss_pred             HHHHHHcChhhcCCCCCEEEECCCccccCC
Confidence            99999986432  36889999998765533

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.69  E-value=1.1e-15  Score=124.39  Aligned_cols=193  Identities=16%  Similarity=0.182  Sum_probs=130.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..        .+...++.++.+|+.|.+++.++++..     ++|+
T Consensus        18 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           18 TGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA--------KKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHH--------HHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999876532111        111357899999999999988887643     7999


Q ss_pred             EEecCCCCc--------------------------ccHHHHHHh----CC--------CCccEEEEecceeeccCCCCCC
Q 023110           76 VYDINGREA--------------------------DEVEPILDA----LP--------NLEQFIYCSSAGVYLKSDLLPH  117 (287)
Q Consensus        76 vi~~a~~~~--------------------------~~~~~ll~~----~~--------~~~~~i~~Ss~~v~~~~~~~~~  117 (287)
                      |||+||...                          .++.+++++    +.        +..++|++||...+...     
T Consensus        90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----  164 (265)
T 2o23_A           90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ-----  164 (265)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-----
T ss_pred             EEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC-----
Confidence            999998631                          112233333    22        24689999998775422     


Q ss_pred             CCCCCCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeee
Q 023110          118 CETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       118 ~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                            .+...| .+|...+.+.+       ..++++++++||.+.++.... ............  .+.      ...+
T Consensus       165 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~--~~~------~~~~  229 (265)
T 2o23_A          165 ------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQ--VPF------PSRL  229 (265)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHT--CSS------SCSC
T ss_pred             ------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc-cCHHHHHHHHHc--CCC------cCCC
Confidence                  122334 89998776653       358999999999998874211 100011111111  111      0236


Q ss_pred             eeHHHHHHHHHHHHcCCccCCceEEecCCccc
Q 023110          190 GHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (287)
Q Consensus       190 i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~  221 (287)
                      ++.+|+|++++.+++.....|+.+++.++..+
T Consensus       230 ~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          230 GDPAEYAHLVQAIIENPFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             BCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             CCHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence            78999999999999876667889999987644

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.69  E-value=6.3e-16  Score=125.94  Aligned_cols=193  Identities=16%  Similarity=0.157  Sum_probs=131.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|+++.+..........    ..+.....++.++.+|+.|.+++.++++..     ++|+
T Consensus        32 TGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  107 (267)
T 4iiu_A           32 TGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETL----NAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYG  107 (267)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            8999999999999999999999887755432111110    111122357899999999999988887643     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC------C-CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEPILDAL------P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~------~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||+||...                    .++.++++++      + +..++|++||...+...           .+...
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  176 (267)
T 4iiu_A          108 VVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN-----------RGQVN  176 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC-----------TTCHH
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC-----------CCCch
Confidence            999998732                    1233444443      2 56799999997765321           12223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      | .+|...+.+.+       ..++++..++||.+.++.....  ...........+.         ..+.+.+|+|++++
T Consensus       177 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~p~---------~~~~~~edva~~~~  245 (267)
T 4iiu_A          177 YSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME--ESALKEAMSMIPM---------KRMGQAEEVAGLAS  245 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC--HHHHHHHHHTCTT---------CSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc--HHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            4 89987776542       3589999999999998753221  2333333333222         13567999999999


Q ss_pred             HHHcCCc--cCCceEEecCCc
Q 023110          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (287)
                      .++....  ..|+.+++.++.
T Consensus       246 ~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          246 YLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCCcccCccCCEEEeCCCc
Confidence            9986532  368899998863

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.69  E-value=5.7e-17  Score=134.60  Aligned_cols=196  Identities=12%  Similarity=0.174  Sum_probs=129.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh-----hcCCeEEEEecCCChHHHHhhhhcC----
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-----FSSKILHLKGDRKDYDFVKSSLSAK----   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~D~~d~~~~~~~~~~~----   71 (287)
                      |||+|+||++++++|+++|++|++++|+.........     .+..     ...++.++.+|+.|.+++.++++..    
T Consensus        24 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   98 (303)
T 1yxm_A           24 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAAD-----ELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF   98 (303)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence            7999999999999999999999999998654211100     0000     1347899999999999998888742    


Q ss_pred             -CccEEEecCCCC--------------------cccHHHHHHhCC------CCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           72 -GFDVVYDINGRE--------------------ADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        72 -~~d~vi~~a~~~--------------------~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                       ++|+|||+||..                    +.++.++++++.      +..++|++||...++            ..
T Consensus        99 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------~~  166 (303)
T 1yxm_A           99 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG------------FP  166 (303)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC------------CT
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccC------------CC
Confidence             599999999852                    122344555431      457899999977211            11


Q ss_pred             CCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh---hHHHHHHHHcCCCccCCCCCCceeeeeeHH
Q 023110          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       125 ~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                      ....| .+|...+.+.+       ..+++++++|||.++|+......   ...+.......  .       ....+.+.+
T Consensus       167 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~-------p~~~~~~~~  237 (303)
T 1yxm_A          167 LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK--I-------PAKRIGVPE  237 (303)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG--S-------TTSSCBCTH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhc--C-------cccCCCCHH
Confidence            12234 78887776553       34899999999999998311111   01111111110  0       112367899


Q ss_pred             HHHHHHHHHHcCCc--cCCceEEecCCcccC
Q 023110          194 DLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       194 D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      |+|++++.++....  ..|+.+++.++..++
T Consensus       238 dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          238 EVSSVVCFLLSPAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence            99999999986532  368899999987554

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.69  E-value=4e-16  Score=126.62  Aligned_cols=203  Identities=16%  Similarity=0.150  Sum_probs=127.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcc-ccccCCCCChhhhhhh-cCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~-~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|+... .....     ..+... ..++.++.+|+.|++++.++++..     ++
T Consensus        10 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   84 (260)
T 1x1t_A           10 TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVR-----AGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRI   84 (260)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHH-----HHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             eCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHH-----HHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999998654 22111     011111 246888999999999988887642     69


Q ss_pred             cEEEecCCCCc--------------------ccHHHHHH----hCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           74 DVVYDINGREA--------------------DEVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~--------------------~~~~~ll~----~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      |++||+||...                    .++..+++    .+.  +..++|++||...+...           .+..
T Consensus        85 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~  153 (260)
T 1x1t_A           85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS-----------ANKS  153 (260)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTCH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC-----------CCCc
Confidence            99999998632                    11222333    333  56899999998765321           1222


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHH-Hc-CCCccCC-CCCCceeeeeeHHHHH
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL-KA-GRPIPIP-GSGIQVTQLGHVKDLA  196 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~-~~-~~~~~~~-~~~~~~~~~i~~~D~a  196 (287)
                      .| .+|..++.+.+       ..++++..++||.+.++...... ....... .. ....... ........+.+.+|+|
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva  232 (260)
T 1x1t_A          154 AYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQI-SALAEKNGVDQETAARELLSEKQPSLQFVTPEQLG  232 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------CHHHHCTTCCCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhh-hhhccccCCchHHHHHHHhhccCCCCCCcCHHHHH
Confidence            34 89998887663       34899999999999887422110 0000000 00 0000000 0000113478899999


Q ss_pred             HHHHHHHcCC--ccCCceEEecCCcc
Q 023110          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      ++++.++...  ...|+.+++.++..
T Consensus       233 ~~~~~l~s~~~~~~tG~~~~vdgG~~  258 (260)
T 1x1t_A          233 GTAVFLASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhChhhcCCCCCEEEECCCcc
Confidence            9999998653  23688999988753

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.69  E-value=1.9e-16  Score=129.15  Aligned_cols=198  Identities=14%  Similarity=0.180  Sum_probs=130.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.........    ........++.++.+|+.|.+++.++++..     ++|+
T Consensus        31 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  106 (269)
T 3gk3_A           31 TGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWL----MHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDV  106 (269)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHH----HHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999865543211110    011111357899999999999888887643     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++.+++++    +.  +..++|++||...+...           .+...|
T Consensus       107 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  175 (269)
T 3gk3_A          107 LINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA-----------FGQANY  175 (269)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTBHHH
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC-----------CCcchH
Confidence            999998732                    122233333    22  55799999997765321           122334


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                       .+|...+.+.+       ..++++..++||.+.++.... ..    .........    .......+.+.+|+|++++.
T Consensus       176 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~----~~~~~~~~~----~~~~~~~~~~p~dvA~~v~~  246 (269)
T 3gk3_A          176 ASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEA-VP----QDVLEAKIL----PQIPVGRLGRPDEVAALIAF  246 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC------------CCSG----GGCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhh-hc----hhHHHHHhh----hcCCcCCccCHHHHHHHHHH
Confidence             89998877653       358999999999998874221 11    111111111    11112345679999999999


Q ss_pred             HHcCCc--cCCceEEecCCcccC
Q 023110          202 VLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      ++....  ..|+.+++.++..+|
T Consensus       247 L~s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          247 LCSDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             HTSTTCTTCCSCEEEESTTSCCC
T ss_pred             HhCCCcCCeeCcEEEECCCEeCc
Confidence            987643  378999999987553

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.68  E-value=2.7e-16  Score=127.38  Aligned_cols=195  Identities=17%  Similarity=0.237  Sum_probs=131.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEc-CCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|+++|++|+++++ +........     .........+.++.+|+.|.+++.++++..     ++|
T Consensus        19 TGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   93 (256)
T 3ezl_A           19 TGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWL-----EDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEID   93 (256)
T ss_dssp             TTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-----HHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCC
Confidence            899999999999999999999999884 433321111     111122357889999999999888887643     789


Q ss_pred             EEEecCCCCc--------------------ccH----HHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      ++||+||...                    .++    +.++..+.  +..++|++||...+...           .+...
T Consensus        94 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  162 (256)
T 3ezl_A           94 VLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ-----------FGQTN  162 (256)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC-----------SCCHH
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC-----------CCCcc
Confidence            9999998632                    122    22333333  56799999997764321           12234


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      | .+|...+.+.+       ..++++..++||.+.++.... ..+..........+.         ..+.+.+|+|++++
T Consensus       163 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~  232 (256)
T 3ezl_A          163 YSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIPV---------RRLGSPDEIGSIVA  232 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHHSTT---------SSCBCHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            4 89998876653       358999999999998763111 122233333332222         23567999999999


Q ss_pred             HHHcCC--ccCCceEEecCCccc
Q 023110          201 QVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~~  221 (287)
                      .++...  ...|+.+++.++..+
T Consensus       233 ~l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          233 WLASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSCC
T ss_pred             HHhCCcccCCcCcEEEECCCEeC
Confidence            988643  247889999987643

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.68  E-value=7.7e-17  Score=131.50  Aligned_cols=197  Identities=15%  Similarity=0.170  Sum_probs=133.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..     ..+.....++.++.+|+.|.+++.++++..     ++|+
T Consensus        32 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (271)
T 4ibo_A           32 TGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTV-----QEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDI  106 (271)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-----HHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999866532211     111222357889999999999988888643     6999


Q ss_pred             EEecCCCCc--------------------ccHHHHHH----hCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~----~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++..+.+    .+.  +..++|++||...+..           ..+...|
T Consensus       107 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~-----------~~~~~~Y  175 (271)
T 4ibo_A          107 LVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELA-----------RATVAPY  175 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-----------CTTCHHH
T ss_pred             EEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCC-----------CCCchhH
Confidence            999999731                    12223333    332  5579999999765421           1122334


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                       .+|...+.+.+       ..++++..++||.+.++...... .+.+........+.         ..+.+.+|+|++++
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~~v~  246 (271)
T 4ibo_A          176 TVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA---------KRWGKPQELVGTAV  246 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTT---------CSCBCGGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence             89998887653       35899999999999887321100 01122222222222         23566899999999


Q ss_pred             HHHcCCc--cCCceEEecCCcccC
Q 023110          201 QVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      .++....  ..|+.+++.++...+
T Consensus       247 ~L~s~~~~~itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          247 FLSASASDYVNGQIIYVDGGMLSV  270 (271)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHhCccccCCCCcEEEECCCeecc
Confidence            9886532  378899999986543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.68  E-value=2.4e-16  Score=126.69  Aligned_cols=185  Identities=15%  Similarity=0.112  Sum_probs=127.3

Q ss_pred             CCcccchHHHHHHHHHHcCC-------eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc---
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---   70 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~---   70 (287)
                      |||+|+||++++++|+++|+       +|++++|+........     ..+......+.++.+|+.|++++.++++.   
T Consensus         8 TGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (244)
T 2bd0_A            8 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKIS-----LECRAEGALTDTITADISDMADVRRLTTHIVE   82 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHH-----HHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHH-----HHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence            79999999999999999999       9999999865421110     01111134688999999999988888763   


Q ss_pred             --CCccEEEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCC
Q 023110           71 --KGFDVVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (287)
Q Consensus        71 --~~~d~vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (287)
                        .++|+|||+||...                    .++.++++++    .  +..++|++||...+...          
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------  152 (244)
T 2bd0_A           83 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF----------  152 (244)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred             hCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC----------
Confidence              26999999998631                    1233344443    2  56899999998875321          


Q ss_pred             CCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHH
Q 023110          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                       .+...| .+|...|.+.+       ..+++++++|||.++++......           .      . . ...+++.+|
T Consensus       153 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----------~------~-~-~~~~~~~~d  212 (244)
T 2bd0_A          153 -RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD-----------D------E-M-QALMMMPED  212 (244)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC-----------S------T-T-GGGSBCHHH
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc-----------c------c-c-cccCCCHHH
Confidence             122344 89998887652       35899999999999998522100           0      0 0 125789999


Q ss_pred             HHHHHHHHHcCCcc--CCceEEecCCcc
Q 023110          195 LARAFVQVLGNEKA--SRQVFNISGEKY  220 (287)
Q Consensus       195 ~a~~~~~~~~~~~~--~~~~~~i~~~~~  220 (287)
                      +|++++.++..+..  .++.+...+++.
T Consensus       213 va~~~~~l~~~~~~~~~g~~~~~~~~~~  240 (244)
T 2bd0_A          213 IAAPVVQAYLQPSRTVVEEIILRPTSGD  240 (244)
T ss_dssp             HHHHHHHHHTSCTTEEEEEEEEEETTCC
T ss_pred             HHHHHHHHHhCCccccchheEEeccccc
Confidence            99999999976542  345555555443

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.68  E-value=8.4e-16  Score=123.78  Aligned_cols=190  Identities=16%  Similarity=0.186  Sum_probs=131.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+..        .+.......+++|+.|.+++.++++..     ++|+
T Consensus        15 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A           15 TGASRGIGKAIAELLAERGAKVIGTATSESGAQAIS--------DYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865522111        111345788999999999988888643     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++..+.++    +.  +..++|++||...+...           .+...|
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  155 (248)
T 3op4_A           87 LVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN-----------AGQANY  155 (248)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-----------CCChHH
Confidence            999999732                    122333333    32  56799999997764321           122334


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                       .+|...+.+.+       ..++++..++||.+..+.... .............+.         ..+.+++|+|++++.
T Consensus       156 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p~---------~r~~~p~dva~~v~~  225 (248)
T 3op4_A          156 AAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA-LNDEQRTATLAQVPA---------GRLGDPREIASAVAF  225 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTT-SCHHHHHHHHHTCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhh-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             89998876653       358999999999998875322 112222222222221         246789999999999


Q ss_pred             HHcCCc--cCCceEEecCCc
Q 023110          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++....  ..|+.+++.++.
T Consensus       226 L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          226 LASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HcCCccCCccCcEEEECCCe
Confidence            886533  368899998875

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.68  E-value=3.7e-16  Score=125.85  Aligned_cols=184  Identities=19%  Similarity=0.266  Sum_probs=123.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+....                ..+..+.+|+.|++++.++++..     ++|+
T Consensus        21 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   84 (247)
T 1uzm_A           21 TGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   84 (247)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH----------------HHhcCeeccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542                12224889999999888887642     6899


Q ss_pred             EEecCCCCcc--------------------cHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....                    ++..++++    ++  +..++|++||...+....          ....|.
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~  154 (247)
T 1uzm_A           85 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG----------NQANYA  154 (247)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------------CCHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCC----------CChhHH
Confidence            9999986321                    12233333    32  568999999976542111          111234


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+.+       ..++++.+++||.+.++.... +...........  .+       ...+.+.+|+|++++.+
T Consensus       155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~--~p-------~~~~~~~~dvA~~~~~l  224 (247)
T 1uzm_A          155 ASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-LDERIQQGALQF--IP-------AKRVGTPAEVAGVVSFL  224 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-SCHHHHHHHGGG--CT-------TCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh-cCHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHH
Confidence            89998876653       358999999999997652100 001111111111  11       12367899999999999


Q ss_pred             HcCCc--cCCceEEecCCcc
Q 023110          203 LGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~~  220 (287)
                      +....  ..|+.+++.++..
T Consensus       225 ~s~~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          225 ASEDASYISGAVIPVDGGMG  244 (247)
T ss_dssp             HSGGGTTCCSCEEEESTTTT
T ss_pred             cCccccCCcCCEEEECCCcc
Confidence            86532  3688999998754

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.68  E-value=1.7e-16  Score=132.60  Aligned_cols=222  Identities=16%  Similarity=0.118  Sum_probs=132.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccc-ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|+++|++|++.+|+..... +.+... .........++.++.+|++|.+++.++++..     ++|
T Consensus        11 TGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l-~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD   89 (324)
T 3u9l_A           11 TGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAI-AGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRID   89 (324)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHH-HHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHH-HHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999753211 111100 0111112357899999999999998888743     799


Q ss_pred             EEEecCCCC--------------------cccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +|||+||..                    +.++.++++++    +  +..++|++||...+...          ......
T Consensus        90 ~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~----------~~~~~~  159 (324)
T 3u9l_A           90 VLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGT----------PPYLAP  159 (324)
T ss_dssp             EEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------CSSCHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCC----------CCcchh
Confidence            999999963                    22344454543    3  66899999998764221          111233


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCC---C--ChhHHHHHHHHcCCCccCCCCCCc--------ee
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY---N--PVEEWFFHRLKAGRPIPIPGSGIQ--------VT  187 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~--------~~  187 (287)
                      | .+|..+|.+.+       ..|+++++++||.+.++...   .  ................   +.+..        ..
T Consensus       160 Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~  236 (324)
T 3u9l_A          160 YFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNA---GLGEEIKKAFAAIVP  236 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTT---THHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhcccccc---CCHHHHHHHHHHhcC
Confidence            4 99999887663       35899999999999865321   0  0001111111110000   00000        00


Q ss_pred             eeeeHHHHHHHHHHHHcCCcc-CCceEEecCCcccC-------HHHHHHHHHHHhCCC
Q 023110          188 QLGHVKDLARAFVQVLGNEKA-SRQVFNISGEKYVT-------FDGLARACAKAAGFP  237 (287)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~~~-~~~~~~i~~~~~~s-------~~e~~~~i~~~~g~~  237 (287)
                      +..+.+|+|++++.++..+.. ....+.++. ....       ..++.+.+.+.+|.+
T Consensus       237 ~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp-~~~~~~~~~~~~~~~~~~~~~~~g~~  293 (324)
T 3u9l_A          237 PDADVSLVADAIVRVVGTASGKRPFRVHVDP-AEDGADVGFSVLDRLRAEMLHRVGLS  293 (324)
T ss_dssp             TTCCTHHHHHHHHHHHTSCTTCCCSEEEECT-TCCSHHHHHHHHHHHHHHHHHHTTCG
T ss_pred             CCCCHHHHHHHHHHHhcCCCCCCCeEEEeCC-cchHHHHHHHHHHHHHHHHHHHcChH
Confidence            125789999999999987642 233555543 3334       334444555555654

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.68  E-value=8e-16  Score=125.27  Aligned_cols=194  Identities=19%  Similarity=0.214  Sum_probs=129.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhh-hhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+........     ..+ ......+.++.+|+.|++++.++++..     ++|
T Consensus        27 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  101 (267)
T 1vl8_A           27 TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAA-----QKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLD  101 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865422111     011 111346888999999999888887642     799


Q ss_pred             EEEecCCCCc--------------------ccHHHH----HHhCC--CCccEEEEeccee-eccCCCCCCCCCCCCCCCc
Q 023110           75 VVYDINGREA--------------------DEVEPI----LDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~l----l~~~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~  127 (287)
                      ++||+||...                    .++..+    +..++  +..++|++||..+ +.           +..+..
T Consensus       102 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~  170 (267)
T 1vl8_A          102 TVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-----------TMPNIS  170 (267)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-----------CSSSCH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc-----------CCCCCh
Confidence            9999998632                    112223    33333  5679999999763 11           111223


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChh--HHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      .| .+|..++.+.+       ..++++.+++||.+.++.... ..  ...........+.         ..+.+.+|+|+
T Consensus       171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p~---------~~~~~p~dvA~  240 (267)
T 1vl8_A          171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA-VFSDPEKLDYMLKRIPL---------GRTGVPEDLKG  240 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH-HHTCHHHHHHHHHTCTT---------SSCBCGGGGHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccc-cccChHHHHHHHhhCCC---------CCCcCHHHHHH
Confidence            34 89999887663       358999999999998774211 10  1111222222111         13678999999


Q ss_pred             HHHHHHcCC--ccCCceEEecCCcc
Q 023110          198 AFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      +++.++...  ...|+.+.+.++..
T Consensus       241 ~v~~l~s~~~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          241 VAVFLASEEAKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHcCccccCCcCCeEEECCCCC
Confidence            999998653  23688899888753

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.68  E-value=9.5e-17  Score=133.03  Aligned_cols=186  Identities=15%  Similarity=0.107  Sum_probs=119.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..     ..+......+.++.+|+.|.+++.++++..     ++|+
T Consensus        37 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~  111 (301)
T 3tjr_A           37 TGGASGIGLATATEFARRGARLVLSDVDQPALEQAV-----NGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDV  111 (301)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999999876532211     111112357899999999999998887643     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||...                    .++.+++++    +.  + ..++|++||...+..           ..+...
T Consensus       112 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  180 (301)
T 3tjr_A          112 VFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP-----------NAGLGT  180 (301)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-----------CCCchH
Confidence            999999631                    123334444    22  3 569999999876422           112233


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHH-----HHcCCCccCCCCCCceeeeeeHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR-----LKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      | .+|...+.+.+       ..++++..++||.+..+.     .......     .....+...++.......+++++|+
T Consensus       181 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv  255 (301)
T 3tjr_A          181 YGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL-----VSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDV  255 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSH-----HHHHHHHC----------------------CCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccc-----ccccccccchhhccccChhhhccccccccCCCCHHHH
Confidence            4 89998876653       358999999999997762     1111100     0011111112222334568899999


Q ss_pred             HHHHHHHHcCCc
Q 023110          196 ARAFVQVLGNEK  207 (287)
Q Consensus       196 a~~~~~~~~~~~  207 (287)
                      |++++.+++++.
T Consensus       256 A~~i~~~l~~~~  267 (301)
T 3tjr_A          256 ARLTADAILANR  267 (301)
T ss_dssp             HHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCC
Confidence            999999997754

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.68  E-value=2.8e-16  Score=128.89  Aligned_cols=198  Identities=17%  Similarity=0.251  Sum_probs=121.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.+.    ..+......+.++++|+.|.+++.++++..     ++|+
T Consensus        35 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  110 (280)
T 4da9_A           35 TGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVI----AELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDC  110 (280)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHH----HHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCE
T ss_pred             ecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999975433111110    111112357899999999999888887643     7999


Q ss_pred             EEecCCCC----------------------cccHHHHHHh----CC--C---CccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           76 VYDINGRE----------------------ADEVEPILDA----LP--N---LEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        76 vi~~a~~~----------------------~~~~~~ll~~----~~--~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      +||+||..                      +.++..++++    +.  +   ..++|++||...+....          .
T Consensus       111 lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~----------~  180 (280)
T 4da9_A          111 LVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSP----------E  180 (280)
T ss_dssp             EEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-----------------C
T ss_pred             EEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCC----------C
Confidence            99999872                      1112223333    32  2   46899999987653211          1


Q ss_pred             CCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ...|..+|...+.+.+       ..++++..++||.+.++.... ...........+        ......+.+.+|+|+
T Consensus       181 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~--------~~p~~r~~~pedvA~  251 (280)
T 4da9_A          181 RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAA-VSGKYDGLIESG--------LVPMRRWGEPEDIGN  251 (280)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------------CCBCHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhh-cchhHHHHHhhc--------CCCcCCcCCHHHHHH
Confidence            1123499998887653       368999999999998874211 111111111110        111234678999999


Q ss_pred             HHHHHHcCCc--cCCceEEecCCccc
Q 023110          198 AFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~  221 (287)
                      +++.++....  ..|+.+++.++..+
T Consensus       252 ~v~~L~s~~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          252 IVAGLAGGQFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             HHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred             HHHHHhCccccCCCCCEEEECCCccc
Confidence            9999987643  37899999998643

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.68  E-value=1.8e-15  Score=123.84  Aligned_cols=193  Identities=14%  Similarity=0.143  Sum_probs=129.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEc-CCccccccCCCCChhhhhhh-cCCeEEEEecCCCh----HHHHhhhhcC---
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDY----DFVKSSLSAK---   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~D~~d~----~~~~~~~~~~---   71 (287)
                      |||+|+||++++++|+++|++|++++| +.....+..     ..+... ...+.++.+|+.|.    +++.++++..   
T Consensus        17 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   91 (276)
T 1mxh_A           17 TGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLV-----AELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   91 (276)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-----HHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHh
Confidence            799999999999999999999999999 544321111     111111 24688999999999    8888877642   


Q ss_pred             --CccEEEecCCCCc--------------------cc-----------HHHHHHh----CC-CC------ccEEEEecce
Q 023110           72 --GFDVVYDINGREA--------------------DE-----------VEPILDA----LP-NL------EQFIYCSSAG  107 (287)
Q Consensus        72 --~~d~vi~~a~~~~--------------------~~-----------~~~ll~~----~~-~~------~~~i~~Ss~~  107 (287)
                        ++|++||+||...                    ..           +..++++    +. +.      .++|++||..
T Consensus        92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  171 (276)
T 1mxh_A           92 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  171 (276)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             cCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchh
Confidence              7999999998631                    11           1123333    32 33      7999999987


Q ss_pred             eeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccC
Q 023110          108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI  179 (287)
Q Consensus       108 v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~  179 (287)
                      .+...           .+...| .+|..++.+.+       ..++++.+++||.+++| .  .+............+.  
T Consensus       172 ~~~~~-----------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~--~~~~~~~~~~~~~~p~--  235 (276)
T 1mxh_A          172 TDLPL-----------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P--AMPQETQEEYRRKVPL--  235 (276)
T ss_dssp             GGSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S--SSCHHHHHHHHTTCTT--
T ss_pred             hcCCC-----------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c--cCCHHHHHHHHhcCCC--
Confidence            75321           122234 89998887653       34899999999999998 2  1222233333322211  


Q ss_pred             CCCCCceeeeeeHHHHHHHHHHHHcCCc--cCCceEEecCCcc
Q 023110          180 PGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       180 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                       +     +++.+.+|+|++++.++....  ..|+.+++.++..
T Consensus       236 -~-----r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~  272 (276)
T 1mxh_A          236 -G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  272 (276)
T ss_dssp             -T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -C-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence             1     126789999999999986533  2688999998754

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.68  E-value=1.7e-16  Score=131.25  Aligned_cols=209  Identities=17%  Similarity=0.139  Sum_probs=136.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcC---CeEEEEecCCChHHHHhhhhcC-----C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS---KILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~D~~d~~~~~~~~~~~-----~   72 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..     ..+.....   ++.++.+|+.|++++.++++..     +
T Consensus        32 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  106 (297)
T 1xhl_A           32 TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETK-----QQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK  106 (297)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            799999999999999999999999999865422111     01111112   6889999999999888887642     7


Q ss_pred             ccEEEecCCCCcc----------------------cHHHHHHh----CC-CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           73 FDVVYDINGREAD----------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        73 ~d~vi~~a~~~~~----------------------~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      +|++||+||....                      ++..++++    +. ...++|++||...+...          ..+
T Consensus       107 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~----------~~~  176 (297)
T 1xhl_A          107 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA----------HSG  176 (297)
T ss_dssp             CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC----------CTT
T ss_pred             CCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCC----------CCC
Confidence            9999999986321                      12233333    32 22799999998765321          012


Q ss_pred             Ccch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC--hh------HHHHHHHHcCCCccCCCCCCceeee
Q 023110          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VE------EWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                      ...| .+|..++.+.+       ..++++++++||.+.++.....  ..      ........  ...+       ...+
T Consensus       177 ~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~--~~~p-------~~r~  247 (297)
T 1xhl_A          177 YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRK--ECIP-------VGHC  247 (297)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT--TTCT-------TSSC
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHH--hcCC-------CCCC
Confidence            2234 89998887653       3689999999999988731100  00      00111110  1111       1246


Q ss_pred             eeHHHHHHHHHHHHcCC---ccCCceEEecCCcccCHHHHHHHHHHH
Q 023110          190 GHVKDLARAFVQVLGNE---KASRQVFNISGEKYVTFDGLARACAKA  233 (287)
Q Consensus       190 i~~~D~a~~~~~~~~~~---~~~~~~~~i~~~~~~s~~e~~~~i~~~  233 (287)
                      .+.+|+|++++.++...   ...|+.+++.++..+.+.+.+..+.+.
T Consensus       248 ~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~  294 (297)
T 1xhl_A          248 GKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSV  294 (297)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred             cCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhh
Confidence            78999999999998643   346889999998877666655444443

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.68  E-value=2.4e-16  Score=127.62  Aligned_cols=199  Identities=18%  Similarity=0.187  Sum_probs=128.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+........     ..+.....++.++.+|+.|.+++.++++..     ++|+
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (256)
T 1geg_A            8 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVA-----SEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   82 (256)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865422111     011111246889999999999888887642     7999


Q ss_pred             EEecCCCCcc--------------------cH----HHHHHhCC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD--------------------EV----EPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||....                    ++    +.+++.+.  + ..++|++||...+...           .+...
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  151 (256)
T 1geg_A           83 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN-----------PELAV  151 (256)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------TTBHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC-----------CCchh
Confidence            9999986321                    12    22333333  4 5799999997653211           11223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHc-----CCC-ccCCCCCCceeeeeeHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-----GRP-IPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~i~~~D  194 (287)
                      | .+|...+.+.+       ..++++.+++||.+.++.     ..........     ... ...+........+.+.+|
T Consensus       152 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d  226 (256)
T 1geg_A          152 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM-----WAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPED  226 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH-----HHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccch-----hhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHH
Confidence            4 89998887653       358999999999998762     1111100000     000 000000001123678999


Q ss_pred             HHHHHHHHHcCC--ccCCceEEecCCcc
Q 023110          195 LARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      +|++++.++...  ...|+.+.+.++..
T Consensus       227 vA~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          227 VAACVSYLASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            999999998654  23688999988753

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.68  E-value=2.5e-16  Score=125.84  Aligned_cols=166  Identities=17%  Similarity=0.116  Sum_probs=111.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.......         .....++.++.+|+.|.+++.++++..     ++|+
T Consensus        11 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (234)
T 2ehd_A           11 TGASRGIGEATARLLHAKGYRVGLMARDEKRLQAL---------AAELEGALPLPGDVREEGDWARAVAAMEEAFGELSA   81 (234)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---------HHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542111         111236889999999999888877642     7899


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+||....                    +    ++.+++.+.  +..++|++||...+..           ..+...|
T Consensus        82 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  150 (234)
T 2ehd_A           82 LVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNP-----------FKGGAAY  150 (234)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSC-----------CTTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCC-----------CCCCchh
Confidence            9999986321                    1    234455543  6789999999876532           1222334


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                       .+|...+.+.+       ..+++++++|||.+.++....         . . ..          +.+++.+|+|++++.
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------~-~-~~----------~~~~~~~dvA~~~~~  209 (234)
T 2ehd_A          151 NASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN---------T-P-GQ----------AWKLKPEDVAQAVLF  209 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-------------------------------------CCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc---------c-c-cc----------cCCCCHHHHHHHHHH
Confidence             89998776552       358999999999887652110         0 0 00          115789999999999


Q ss_pred             HHcCCc
Q 023110          202 VLGNEK  207 (287)
Q Consensus       202 ~~~~~~  207 (287)
                      ++..+.
T Consensus       210 l~~~~~  215 (234)
T 2ehd_A          210 ALEMPG  215 (234)
T ss_dssp             HHHSCC
T ss_pred             HhCCCc
Confidence            997653

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.68  E-value=3.2e-16  Score=127.29  Aligned_cols=198  Identities=17%  Similarity=0.104  Sum_probs=124.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..        .+....+.++.+|+.|.+++.++++..     ++|+
T Consensus        15 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A           15 TGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVA--------GEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999876532111        122457899999999999988888743     7899


Q ss_pred             EEecCCCCc---------------------ccHHHHHHh----CC--C----CccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           76 VYDINGREA---------------------DEVEPILDA----LP--N----LEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~ll~~----~~--~----~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      +||+||...                     .++..++++    +.  +    ..++|++||...+..           ..
T Consensus        87 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~  155 (261)
T 3n74_A           87 LVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP-----------RP  155 (261)
T ss_dssp             EEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC-----------CT
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC-----------CC
Confidence            999998632                     112223333    22  1    346999999775421           11


Q ss_pred             CCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       125 ~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ....| .+|...+.+.+       ..++++..++||.+.++.....     ..... ...............+++.+|+|
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~dva  229 (261)
T 3n74_A          156 NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTF-----MGEDS-EEIRKKFRDSIPMGRLLKPDDLA  229 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------CTTSSCCCHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhh-----cccCc-HHHHHHHhhcCCcCCCcCHHHHH
Confidence            22234 99998887653       3589999999999988742111     00000 00000111112223578899999


Q ss_pred             HHHHHHHcCCc--cCCceEEecCCcccCH
Q 023110          197 RAFVQVLGNEK--ASRQVFNISGEKYVTF  223 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~s~  223 (287)
                      ++++.++....  ..|+.+++.++..++-
T Consensus       230 ~~~~~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          230 EAAAFLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             HHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence            99999986432  3789999999876654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.68  E-value=8.7e-16  Score=123.49  Aligned_cols=189  Identities=18%  Similarity=0.180  Sum_probs=128.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+...          ..++.++.+|+.|++++.++++..     ++|+
T Consensus        11 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (245)
T 1uls_A           11 TGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE----------AVGAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (245)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----------TTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------HcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654221111          013788999999999988887642     5899


Q ss_pred             EEecCCCCcc--------------------cHHH----HHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------EVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~----ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....                    ++..    ++..+.  +..++|++||...++..           ....|.
T Consensus        81 lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~Y~  149 (245)
T 1uls_A           81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL-----------GQANYA  149 (245)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT-----------TCHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC-----------CchhHH
Confidence            9999986321                    1222    334443  56799999998733211           111234


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+.+       ..++++.+++||.+.++.... +............+.         ..+.+.+|+|++++.+
T Consensus       150 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~~~~~dvA~~v~~l  219 (245)
T 1uls_A          150 ASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAIAATPL---------GRAGKPLEVAYAALFL  219 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHHHTCTT---------CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhhCCC---------CCCcCHHHHHHHHHHH
Confidence            88888776553       358999999999998874321 112222222222111         1267899999999999


Q ss_pred             HcCCc--cCCceEEecCCcc
Q 023110          203 LGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~~  220 (287)
                      +....  ..|+.+.+.++..
T Consensus       220 ~s~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          220 LSDESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             HSGGGTTCCSCEEEESTTTT
T ss_pred             hCchhcCCcCCEEEECCCcc
Confidence            86532  3688999988754

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.68  E-value=3.4e-16  Score=128.31  Aligned_cols=194  Identities=15%  Similarity=0.194  Sum_probs=130.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.....+..     ..+......+.++.+|+.|.+++.++++..     ++|+
T Consensus        30 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~  104 (279)
T 3sju_A           30 TGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAV-----DGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGI  104 (279)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            799999999999999999999999999876532111     111112357899999999999888887643     7899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh------CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           76 VYDINGREA--------------------DEVEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~------~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      +||+||...                    .++..++++      +.  +..++|++||...+...           .+..
T Consensus       105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~-----------~~~~  173 (279)
T 3sju_A          105 LVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGV-----------MYAA  173 (279)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCC-----------TTCH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCC-----------CCCh
Confidence            999999732                    122233333      22  55799999998764221           1222


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC---------C-hhHHHHHHHHcCCCccCCCCCCceeee
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN---------P-VEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                      .| .+|..++.+.+       ..++++..++||.+.++....         . .............+         ...+
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~  244 (279)
T 3sju_A          174 PYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIP---------LGRY  244 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCT---------TSSC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCC---------CCCC
Confidence            34 99998877653       358999999999998762100         0 01112222222221         1245


Q ss_pred             eeHHHHHHHHHHHHcCCc--cCCceEEecCCc
Q 023110          190 GHVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       190 i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      .+++|+|++++.++....  ..|+.+++.++.
T Consensus       245 ~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          245 STPEEVAGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             BCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             CCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            779999999999987543  378899999875

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.67  E-value=3.1e-16  Score=127.63  Aligned_cols=196  Identities=15%  Similarity=0.156  Sum_probs=131.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh-hcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+...     .+.+ ....+.++++|+.|.+++.++++..     ++|
T Consensus        26 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  100 (266)
T 4egf_A           26 TGATKGIGADIARAFAAAGARLVLSGRDVSELDAARR-----ALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLD  100 (266)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999998665321111     1111 2457899999999998888877643     799


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHh----CC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           75 VVYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      ++||+||...                    .++..+.++    +.  + ..++|++||...+...           .+..
T Consensus       101 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~  169 (266)
T 4egf_A          101 VLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL-----------PDHY  169 (266)
T ss_dssp             EEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------TTCH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC-----------CCCh
Confidence            9999998742                    122233333    22  2 4699999998765321           1222


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      .| .+|...+.+.+       ..++++..++||.+.++..... .............++         ..+.+.+|+|++
T Consensus       170 ~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva~~  240 (266)
T 4egf_A          170 AYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPL---------GRFAVPHEVSDA  240 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTT---------SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCC---------CCCcCHHHHHHH
Confidence            34 99998887653       3589999999999987631000 001112222222222         235679999999


Q ss_pred             HHHHHcCC--ccCCceEEecCCccc
Q 023110          199 FVQVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~~~  221 (287)
                      ++.++...  ...|+.+++.++..+
T Consensus       241 v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          241 VVWLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCchhcCccCcEEEECCCccC
Confidence            99998653  237889999998654

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.67  E-value=1.7e-15  Score=123.52  Aligned_cols=196  Identities=16%  Similarity=0.133  Sum_probs=129.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++++.....+.+.    ..+.....++.++.+|+.|.+++.++++..     ++|+
T Consensus        24 TGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   99 (270)
T 3is3_A           24 TGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVV----SEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDI   99 (270)
T ss_dssp             SCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998876544221111    111222457899999999999998888743     7899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CCCCccEEEEecceeeccCCCCCCCCCCCCCCCcch-h
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (287)
                      +||+||...                    .++..++++    +....++|++||.....          ....+...| .
T Consensus       100 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~~~~Y~a  169 (270)
T 3is3_A          100 AVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD----------FSVPKHSLYSG  169 (270)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT----------CCCTTCHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc----------CCCCCCchhHH
Confidence            999999732                    122333333    33445899999965210          111223345 9


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCC-----------CChhHHHHHHHHcCCCccCCCCCCceeeeeeH
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (287)
                      +|...+.+.+       ..++++..++||.+.++...           ...............++         ..+.+.
T Consensus       170 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p  240 (270)
T 3is3_A          170 SKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL---------HRNGWP  240 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT---------CSCBCH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC---------CCCCCH
Confidence            9998887653       35899999999999887411           00011111122211111         235679


Q ss_pred             HHHHHHHHHHHcCCc--cCCceEEecCCc
Q 023110          193 KDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       193 ~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      +|+|++++.++....  ..|+.+++.++.
T Consensus       241 ~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          241 QDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            999999999986432  368899998864

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.67  E-value=6.1e-16  Score=125.31  Aligned_cols=191  Identities=17%  Similarity=0.204  Sum_probs=129.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC----CccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~----~~d~v   76 (287)
                      |||+|.||++++++|+++|++|++++|+.....+.+           ...+.++.+|+.|.+++.++++..    ++|++
T Consensus        15 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~l   83 (257)
T 3tl3_A           15 TGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL-----------GDRARFAAADVTDEAAVASALDLAETMGTLRIV   83 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT-----------CTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc-----------CCceEEEECCCCCHHHHHHHHHHHHHhCCCCEE
Confidence            799999999999999999999999999655432222           357899999999999888877643    79999


Q ss_pred             EecCCCCc------------------------ccHHHHHHh----CC----------CCccEEEEecceeeccCCCCCCC
Q 023110           77 YDINGREA------------------------DEVEPILDA----LP----------NLEQFIYCSSAGVYLKSDLLPHC  118 (287)
Q Consensus        77 i~~a~~~~------------------------~~~~~ll~~----~~----------~~~~~i~~Ss~~v~~~~~~~~~~  118 (287)
                      ||+||...                        .++..++++    +.          +..++|++||...+...      
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  157 (257)
T 3tl3_A           84 VNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ------  157 (257)
T ss_dssp             EECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH------
T ss_pred             EECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC------
Confidence            99998531                        112223333    21          13479999998764211      


Q ss_pred             CCCCCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeee
Q 023110          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       119 e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                           .+...| .+|...+.+.+       ..++++..++||.+.++.... .............+.  .      ..+.
T Consensus       158 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~--~------~r~~  223 (257)
T 3tl3_A          158 -----IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS-LPEEARASLGKQVPH--P------SRLG  223 (257)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC----CHHHHHHHHHTSSS--S------CSCB
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh-ccHHHHHHHHhcCCC--C------CCcc
Confidence                 112234 89998876653       358999999999998874321 122222222222211  0      2367


Q ss_pred             eHHHHHHHHHHHHcCCccCCceEEecCCcccC
Q 023110          191 HVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       191 ~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (287)
                      +.+|+|++++.+++.....|+.+++.++..++
T Consensus       224 ~p~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          224 NPDEYGALAVHIIENPMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             CHHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred             CHHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence            89999999999998866689999999987554

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.67  E-value=1.5e-16  Score=131.37  Aligned_cols=197  Identities=22%  Similarity=0.231  Sum_probs=131.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcc-ccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|.||++++++|+++|++|++.+|+... ..+.+.    ........++.++.+|+.|.+++.++++..     ++|
T Consensus        55 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  130 (294)
T 3r3s_A           55 TGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVK----ALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLD  130 (294)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHH----HHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHH----HHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999987432 111111    111122357889999999999888877642     799


Q ss_pred             EEEecCCCCc---------------------ccHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           75 VVYDINGREA---------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        75 ~vi~~a~~~~---------------------~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      ++||+||...                     .++..+++++.    ...++|++||...+....           ....|
T Consensus       131 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~-----------~~~~Y  199 (294)
T 3r3s_A          131 ILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSP-----------HLLDY  199 (294)
T ss_dssp             EEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCT-----------TCHHH
T ss_pred             EEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCC-----------CchHH
Confidence            9999998632                     12334444432    335899999988764221           22234


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCC-CCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                       .+|...+.+.+       ..++++..++||.+.++.. .......         .............+.+.+|+|++++
T Consensus       200 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~---------~~~~~~~~~p~~r~~~p~dvA~~v~  270 (294)
T 3r3s_A          200 AATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQD---------KIPQFGQQTPMKRAGQPAELAPVYV  270 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGG---------GSTTTTTTSTTSSCBCGGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHH---------HHHHHHhcCCCCCCcCHHHHHHHHH
Confidence             99998887653       3589999999999988631 0000000         0111111122234677999999999


Q ss_pred             HHHcCCc--cCCceEEecCCccc
Q 023110          201 QVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~~  221 (287)
                      .++....  ..|+++++.++..+
T Consensus       271 ~L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          271 YLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             HHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHhCccccCCCCCEEEECCCccC
Confidence            9986532  36899999998654

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.67  E-value=1.9e-15  Score=122.99  Aligned_cols=196  Identities=14%  Similarity=0.108  Sum_probs=130.5

Q ss_pred             CCcc--cchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+  |+||++++++|+++|++|++++|+. ...+.+     ..+........++.+|+.|++++.++++..     ++
T Consensus        15 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (265)
T 1qsg_A           15 TGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRV-----EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF   88 (265)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHH-----HHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            7999  9999999999999999999999986 211111     111111134578999999999888877642     68


Q ss_pred             cEEEecCCCCcc-------------------------cHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        74 d~vi~~a~~~~~-------------------------~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      |++||+||....                         ++..+++++.    ...++|++||...+...           .
T Consensus        89 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~  157 (265)
T 1qsg_A           89 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI-----------P  157 (265)
T ss_dssp             EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----------T
T ss_pred             CEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC-----------C
Confidence            999999986421                         1223444433    23589999997764321           1


Q ss_pred             CCc-chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          125 PKS-RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       125 ~~~-~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      +.. |..+|...+.+.+       ..++++.+++||.++++.... .....+........++         ..+.+++|+
T Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dv  228 (265)
T 1qsg_A          158 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---------RRTVTIEDV  228 (265)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC---------CCCCCHHHH
Confidence            122 3489999887663       248999999999999885321 1112223333222222         135679999


Q ss_pred             HHHHHHHHcCCc--cCCceEEecCCcccC
Q 023110          196 ARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      |++++.++....  ..|+.+++.++..++
T Consensus       229 a~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          229 GNSAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence            999999986532  268899999986544

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.67  E-value=4.4e-16  Score=126.21  Aligned_cols=195  Identities=16%  Similarity=0.153  Sum_probs=128.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcc--ccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||++++++|+++|++|++++|+...  ..+..     ..+.....++.++.+|+.|.+++.++++..     ++
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (258)
T 3a28_C            8 TGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETI-----KLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGF   82 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999998654  21111     011111346889999999999888877632     79


Q ss_pred             cEEEecCCCCcc--------------------cHHHHH----HhCC--CC-ccEEEEecceeeccCCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD--------------------EVEPIL----DALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~ll----~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (287)
                      |++||+||....                    ++..++    ..+.  +. .++|++||...+...           .+.
T Consensus        83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~  151 (258)
T 3a28_C           83 DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF-----------PIL  151 (258)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC-----------TTC
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC-----------CCc
Confidence            999999986321                    122233    3332  45 799999998764321           122


Q ss_pred             cch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChh-----------HHHHHHHHcCCCccCCCCCCcee
Q 023110          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-----------EWFFHRLKAGRPIPIPGSGIQVT  187 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~  187 (287)
                      ..| .+|...+.+.+       ..++++.+++||.+.++.... ..           ...........+         ..
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p---------~~  221 (258)
T 3a28_C          152 SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ-IDAELSKINGKPIGENFKEYSSSIA---------LG  221 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH-HHHHHHHHHCCCTTHHHHHHHTTCT---------TS
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh-hhhhhccccCCchHHHHHHHHhcCC---------CC
Confidence            234 89998887653       358999999999987652100 00           000111111111         12


Q ss_pred             eeeeHHHHHHHHHHHHcCC--ccCCceEEecCCccc
Q 023110          188 QLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (287)
                      .+.+.+|+|++++.++...  ...|+.+++.++..+
T Consensus       222 r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          222 RPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred             CccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence            3678999999999998654  236889999887543

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.67  E-value=1.5e-15  Score=122.41  Aligned_cols=180  Identities=15%  Similarity=0.083  Sum_probs=119.1

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-------
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-------   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-------   71 (287)
                      |||+|+||++++++|+++|  ++|++++|+..... .+.+.       ...++.++.+|+.|.+++.++++..       
T Consensus         9 tGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~-~l~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            9 TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT-ELKSI-------KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH-HHHTC-------CCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             ecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHH-HHHhc-------cCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999  99999999866532 11110       0357899999999999888887643       


Q ss_pred             CccEEEecCCCCc---------------------ccHHHHHHhCC-----C------------CccEEEEecceeeccCC
Q 023110           72 GFDVVYDINGREA---------------------DEVEPILDALP-----N------------LEQFIYCSSAGVYLKSD  113 (287)
Q Consensus        72 ~~d~vi~~a~~~~---------------------~~~~~ll~~~~-----~------------~~~~i~~Ss~~v~~~~~  113 (287)
                      ++|+|||+||...                     .++.++++++.     .            ..++|++||...+....
T Consensus        81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  160 (250)
T 1yo6_A           81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc
Confidence            7999999998643                     11233444432     2            57899999987654321


Q ss_pred             CCCCCCCCCCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCc
Q 023110          114 LLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (287)
Q Consensus       114 ~~~~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (287)
                      .    +..+..+...| .+|...+.+++       ..++++.+++||.+.++....                        
T Consensus       161 ~----~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------------  212 (250)
T 1yo6_A          161 T----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK------------------------  212 (250)
T ss_dssp             C----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred             c----cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC------------------------
Confidence            1    11122333345 89999887763       248999999999987763110                        


Q ss_pred             eeeeeeHHHHHHHHHHHHcCCc--cCCceEEecC
Q 023110          186 VTQLGHVKDLARAFVQVLGNEK--ASRQVFNISG  217 (287)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~  217 (287)
                       ..+++.+|+|++++.++....  ..|..+.+.+
T Consensus       213 -~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g  245 (250)
T 1yo6_A          213 -NAALTVEQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             -------HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             -CCCCCHHHHHHHHHHHHhcccccCCCeEEEECC
Confidence             135789999999999997654  2555555444

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.67  E-value=5.3e-16  Score=126.19  Aligned_cols=177  Identities=17%  Similarity=0.163  Sum_probs=122.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+ +.          ...+.++.+|+.|.+++.++++..     ++|+
T Consensus        22 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   90 (266)
T 3p19_A           22 TGASSGIGEAIARRFSEEGHPLLLLARRVERLKA-LN----------LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADA   90 (266)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHT-TC----------CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-hh----------cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence            7999999999999999999999999998765322 22          247889999999999888887643     7999


Q ss_pred             EEecCCCCc--------------------ccHHH----HHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~----ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++..    ++..+.  +..++|++||...+...           .+...|
T Consensus        91 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-----------~~~~~Y  159 (266)
T 3p19_A           91 IVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF-----------PDHAAY  159 (266)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----------TTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC-----------CCCchH
Confidence            999999731                    12223    333333  66899999998765321           122234


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                       .+|...+.+.+       ..++++..++||.+.++................ ...+.       ..+++.+|+|++++.
T Consensus       160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~~-------~r~~~pedvA~av~~  231 (266)
T 3p19_A          160 CGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDA-WRVDM-------GGVLAADDVARAVLF  231 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHH-HHHHT-------TCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHh-hcccc-------cCCCCHHHHHHHHHH
Confidence             89998886653       358999999999998874211111111111110 00111       236789999999999


Q ss_pred             HHcCCc
Q 023110          202 VLGNEK  207 (287)
Q Consensus       202 ~~~~~~  207 (287)
                      ++.++.
T Consensus       232 l~~~~~  237 (266)
T 3p19_A          232 AYQQPQ  237 (266)
T ss_dssp             HHHSCT
T ss_pred             HHcCCC
Confidence            998765

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.67  E-value=2.3e-15  Score=120.99  Aligned_cols=184  Identities=13%  Similarity=0.144  Sum_probs=129.1

Q ss_pred             CCcccchHHHHHHHHHH-cCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC---CccEE
Q 023110            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~---~~d~v   76 (287)
                      |||+|+||+++++.|++ .|+.|++.+|+....               ...+.++.+|+.|.+++.++++..   ++|++
T Consensus        10 TGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~---------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~l   74 (244)
T 4e4y_A           10 TGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS---------------AENLKFIKADLTKQQDITNVLDIIKNVSFDGI   74 (244)
T ss_dssp             ETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC---------------CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEE
T ss_pred             eCCCChHHHHHHHHHHhcCCcEEEEeccccccc---------------cccceEEecCcCCHHHHHHHHHHHHhCCCCEE
Confidence            79999999999999999 789999999886521               246789999999999998887543   79999


Q ss_pred             EecCCCC--------------------cccHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hh
Q 023110           77 YDINGRE--------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (287)
Q Consensus        77 i~~a~~~--------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (287)
                      ||+||..                    ..++..+++++.    ...++|++||...+...           .+...| .+
T Consensus        75 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~~~~Y~as  143 (244)
T 4e4y_A           75 FLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAK-----------PNSFAYTLS  143 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCC-----------TTBHHHHHH
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCC-----------CCCchhHHH
Confidence            9999973                    122444566544    22489999998765321           122234 99


Q ss_pred             hHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHH-----------HHHHHHcCCCccCCCCCCceeeeeeHH
Q 023110          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEW-----------FFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                      |...+.+.+       ..++++..++||.+.++.... ....           .........         ....+.+++
T Consensus       144 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p~  213 (244)
T 4e4y_A          144 KGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRN-LIQKYANNVGISFDEAQKQEEKEF---------PLNRIAQPQ  213 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHH-HHHHHHHHHTCCHHHHHHHHHTTS---------TTSSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHH-HHHhhhhhcCCCHHHHHHHHhhcC---------CCCCCcCHH
Confidence            998887663       458999999999998763100 0000           111111111         122467899


Q ss_pred             HHHHHHHHHHcCCc--cCCceEEecCCcc
Q 023110          194 DLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       194 D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      |+|++++.++....  ..|+.+++.++..
T Consensus       214 dvA~~v~~l~s~~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          214 EIAELVIFLLSDKSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHhcCccccccCCeEeECCCcc
Confidence            99999999997543  3688999998754

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.66  E-value=2.8e-15  Score=122.25  Aligned_cols=194  Identities=18%  Similarity=0.184  Sum_probs=129.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++++.....+.+.    ..+......+.++.+|+.|.+++.+++++.     ++|+
T Consensus        37 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  112 (271)
T 3v2g_A           37 TGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVV----SEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDI  112 (271)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            7999999999999999999999999877543221111    111222457889999999999988887643     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CCCCccEEEEecceeeccCCCCCCCCCCCCCCCcch-h
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (287)
                      +||+||...                    .++..++++    ++...++|++||.....          .+..+...| .
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~----------~~~~~~~~Y~a  182 (271)
T 3v2g_A          113 LVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL----------VPWPGISLYSA  182 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC----------CCSTTCHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc----------CCCCCchHHHH
Confidence            999998731                    122233333    44456899998854321          011223335 9


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      +|...+.+.+       ..++++..++||.+.++......  ..........+.         ..+...+|+|++++.++
T Consensus       183 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~---------~r~~~pedvA~~v~fL~  251 (271)
T 3v2g_A          183 SKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG--DHAEAQRERIAT---------GSYGEPQDIAGLVAWLA  251 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC--SSHHHHHHTCTT---------SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc--hhHHHHHhcCCC---------CCCCCHHHHHHHHHHHh
Confidence            9998887653       35899999999999987532110  111222222222         12467899999999988


Q ss_pred             cCC--ccCCceEEecCCc
Q 023110          204 GNE--KASRQVFNISGEK  219 (287)
Q Consensus       204 ~~~--~~~~~~~~i~~~~  219 (287)
                      ...  ...|+.+++.++.
T Consensus       252 s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          252 GPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             CcccCCccCCEEEeCcCc
Confidence            543  3378899998874

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.66  E-value=3.2e-16  Score=127.95  Aligned_cols=196  Identities=15%  Similarity=0.142  Sum_probs=131.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc----CCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~----~~~d~v   76 (287)
                      |||+|+||++++++|+++|++|++++|+... .+..     ..+......+.++.+|+.|.+++.++.+.    .++|++
T Consensus        37 TGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~l  110 (273)
T 3uf0_A           37 TGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEVA-----DEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVL  110 (273)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTHH-HHHH-----HHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCHHHH-HHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEE
Confidence            7999999999999999999999999976432 1110     11111135688999999999888777442    279999


Q ss_pred             EecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-
Q 023110           77 YDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        77 i~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (287)
                      ||+||...                    .++..++++    +.  +..++|++||...+...           .+...| 
T Consensus       111 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-----------~~~~~Y~  179 (273)
T 3uf0_A          111 VNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGG-----------RNVAAYA  179 (273)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------SSCHHHH
T ss_pred             EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCC-----------CCChhHH
Confidence            99998732                    123334443    22  56799999998765321           122234 


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      .+|...+.+.+       ..++++..++||.+.++..... .............+.         ..+.+++|+|++++.
T Consensus       180 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~~v~~  250 (273)
T 3uf0_A          180 ASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA---------GRWATPEDMVGPAVF  250 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT---------SSCBCGGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence            99998887663       3689999999999988742110 011112222222221         235678999999999


Q ss_pred             HHcCC--ccCCceEEecCCcccC
Q 023110          202 VLGNE--KASRQVFNISGEKYVT  222 (287)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~~s  222 (287)
                      ++...  ...|+.+++.++...|
T Consensus       251 L~s~~a~~itG~~i~vdGG~~~s  273 (273)
T 3uf0_A          251 LASDAASYVHGQVLAVDGGWLAS  273 (273)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhCchhcCCcCCEEEECcCccCC
Confidence            98753  2378999999986543

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.66  E-value=8.3e-16  Score=124.08  Aligned_cols=175  Identities=10%  Similarity=0.095  Sum_probs=124.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+....                 ....+.+|+.|.+++.++++..     ++|+
T Consensus        28 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-----------------~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~   90 (251)
T 3orf_A           28 LGGSGALGAEVVKFFKSKSWNTISIDFRENPN-----------------ADHSFTIKDSGEEEIKSVIEKINSKSIKVDT   90 (251)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------------SSEEEECSCSSHHHHHHHHHHHHTTTCCEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------------cccceEEEeCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999997652                 2235788999999888887643     6899


Q ss_pred             EEecCCCC---------------------cccHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-
Q 023110           76 VYDINGRE---------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~---------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (287)
                      |||+||..                     +.++.++++++.    ...++|++||...+..           ..+...| 
T Consensus        91 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  159 (251)
T 3orf_A           91 FVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR-----------TSGMIAYG  159 (251)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHHHH
T ss_pred             EEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC-----------CCCCchhH
Confidence            99999852                     112333444432    3358999999876521           1222334 


Q ss_pred             hhhHHHHHHhh---------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          130 KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 ~~k~~~E~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      .+|...+.+.+         ..++++.+++||.+.++.         ........         ....+++.+|+|++++
T Consensus       160 ~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~---------~~~~~~~~---------~~~~~~~~~dva~~i~  221 (251)
T 3orf_A          160 ATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT---------NRKYMSDA---------NFDDWTPLSEVAEKLF  221 (251)
T ss_dssp             HHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH---------HHHHCTTS---------CGGGSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc---------hhhhcccc---------cccccCCHHHHHHHHH
Confidence            99998887663         257899999999887651         11211111         2235678999999999


Q ss_pred             HHHcC---CccCCceEEecCCccc
Q 023110          201 QVLGN---EKASRQVFNISGEKYV  221 (287)
Q Consensus       201 ~~~~~---~~~~~~~~~i~~~~~~  221 (287)
                      .++..   ....|+.+++.+++..
T Consensus       222 ~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          222 EWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             HHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             HHhcCccccCCcceEEEEecCCcc
Confidence            99987   3347889998876553

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.66  E-value=4.6e-16  Score=126.12  Aligned_cols=201  Identities=15%  Similarity=0.106  Sum_probs=125.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++++.........    ..+......+.++.+|+.|.+++.++++..     ++|+
T Consensus        14 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   89 (259)
T 3edm_A           14 AGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAV----AEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHG   89 (259)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHH----HHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999998655433111110    111122357889999999999988888643     7999


Q ss_pred             EEecCCCC---------------------cccHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-
Q 023110           76 VYDINGRE---------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~---------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (287)
                      +||+||..                     +.++..+++++.    ...++|++||...+..          ...+...| 
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~~~~Y~  159 (259)
T 3edm_A           90 LVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG----------GGPGALAYA  159 (259)
T ss_dssp             EEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC----------CSTTCHHHH
T ss_pred             EEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC----------CCCCcHHHH
Confidence            99999853                     112334555543    2348999999876511          11122234 


Q ss_pred             hhhHHHHHHhh----h--CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       130 ~~k~~~E~~~~----~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      .+|...+.+.+    +  .++++..+.||.+.++..............         ........+.+.+|+|++++.++
T Consensus       160 asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~---------~~~~p~~r~~~pedva~~v~~L~  230 (259)
T 3edm_A          160 TSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERV---------AGATSLKREGSSEDVAGLVAFLA  230 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-------------------------------CCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHc
Confidence            99998887663    1  248999999999987642111001111111         11112234668999999999998


Q ss_pred             cCCc--cCCceEEecCCcccCHH
Q 023110          204 GNEK--ASRQVFNISGEKYVTFD  224 (287)
Q Consensus       204 ~~~~--~~~~~~~i~~~~~~s~~  224 (287)
                      ....  ..|+.+++.++...+..
T Consensus       231 s~~~~~itG~~i~vdGg~~~~~~  253 (259)
T 3edm_A          231 SDDAAYVTGACYDINGGVLFSEG  253 (259)
T ss_dssp             SGGGTTCCSCEEEESBCSSBC--
T ss_pred             CccccCccCCEEEECCCcCCCCC
Confidence            6543  37899999998765443

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.66  E-value=6.6e-16  Score=123.76  Aligned_cols=187  Identities=18%  Similarity=0.244  Sum_probs=125.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....           .+ . ++.++.+|+.| +++.++++.     .++|+
T Consensus         8 TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~~-~-~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~   73 (239)
T 2ekp_A            8 TGGSRGIGRAIAEALVARGYRVAIASRNPEEAA-----------QS-L-GAVPLPTDLEK-DDPKGLVKRALEALGGLHV   73 (239)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH-----------HH-H-TCEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------Hh-h-CcEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999875411           11 1 37889999998 666665542     27999


Q ss_pred             EEecCCCCc--------------------ccH----HHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++    +.++..+.  +..++|++||...+....         ..+...|
T Consensus        74 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~~~Y  144 (239)
T 2ekp_A           74 LVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG---------PVPIPAY  144 (239)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------TSCCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC---------CCCCccH
Confidence            999998632                    112    22333333  678999999988764321         1223344


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                       .+|...+.+.+       ..+++++++|||.+.++...... ............+.         ..+.+.+|+|++++
T Consensus       145 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dvA~~~~  215 (239)
T 2ekp_A          145 TTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPM---------GRWARPEEIARVAA  215 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTT---------SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence             89998887653       34899999999999887421000 01112222221111         23678999999999


Q ss_pred             HHHcCCc--cCCceEEecCCc
Q 023110          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (287)
                      .++....  ..|+.+++.++.
T Consensus       216 ~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          216 VLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             HHTSGGGTTCCSCEEEESTTT
T ss_pred             HHcCchhcCCCCCEEEECCCc
Confidence            9986532  368889988874

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.66  E-value=1.3e-15  Score=124.65  Aligned_cols=195  Identities=17%  Similarity=0.177  Sum_probs=132.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..     ..+.....++.++++|+.|.+++.++++..     ++|+
T Consensus        38 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~  112 (276)
T 3r1i_A           38 TGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVA-----DEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDI  112 (276)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999866532111     111222357889999999999998888743     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||...                    .++..++++    +.  + ..++|++||...+...         ...+...
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~---------~~~~~~~  183 (276)
T 3r1i_A          113 AVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN---------IPQQVSH  183 (276)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------CSSCCHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC---------CCCCcch
Confidence            999999742                    122233333    22  2 3689999997654211         1112333


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      | .+|...+.+.+       ..++++..++||.+..+.... . ...........++         ..+.+.+|+|++++
T Consensus       184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~-~-~~~~~~~~~~~p~---------~r~~~pedvA~~v~  252 (276)
T 3r1i_A          184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP-L-ADYHALWEPKIPL---------GRMGRPEELTGLYL  252 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG-G-GGGHHHHGGGSTT---------SSCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc-c-hHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            5 99998887663       358999999999998875321 1 1122222222221         13567899999999


Q ss_pred             HHHcCCc--cCCceEEecCCcc
Q 023110          201 QVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      .++....  ..|+.+++.++..
T Consensus       253 fL~s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          253 YLASAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHcCccccCccCcEEEECcCcc
Confidence            9987532  3788999988753

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.66  E-value=1.6e-15  Score=124.32  Aligned_cols=195  Identities=13%  Similarity=0.105  Sum_probs=132.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+........     .........+.++.+|+.|.+++.++++.     ..+|+
T Consensus        40 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  114 (279)
T 3ctm_A           40 TGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAE-----HLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDV  114 (279)
T ss_dssp             TTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHH-----HHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999875421110     11111135788999999999999888873     14999


Q ss_pred             EEecCCCCcc----------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      |||+||....                      +    ++.+++.+.  +..+||++||...+...         ...+..
T Consensus       115 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~~~  185 (279)
T 3ctm_A          115 FVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN---------IPQLQA  185 (279)
T ss_dssp             EEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------------CCHH
T ss_pred             EEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC---------CCCCcc
Confidence            9999875321                      1    345666654  67899999997754210         112233


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      .| .+|...|.+++       ..+ ++.+++||.+.++.... .............+.         ..+++.+|+|+++
T Consensus       186 ~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~~~~~dvA~~~  254 (279)
T 3ctm_A          186 PYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDF-ASKDMKAKWWQLTPL---------GREGLTQELVGGY  254 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSS-CCHHHHHHHHHHSTT---------CSCBCGGGTHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccc-cChHHHHHHHHhCCc---------cCCcCHHHHHHHH
Confidence            45 89999988763       246 89999999998874321 111222222211111         1367899999999


Q ss_pred             HHHHcCC--ccCCceEEecCCcc
Q 023110          200 VQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      +.++...  ...|+.+++.++..
T Consensus       255 ~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          255 LYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHhCccccCccCCEEEECCCee
Confidence            9998753  23688999998753

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.66  E-value=5.5e-15  Score=121.39  Aligned_cols=196  Identities=17%  Similarity=0.127  Sum_probs=128.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.+.    ..+.....++.++.+|+.|.+++.++++..     ++|+
T Consensus        35 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~  110 (283)
T 1g0o_A           35 TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVV----AAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI  110 (283)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH----HHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211110    111112346889999999999888777632     6899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CCCCccEEEEecceeeccCCCCCCCCCCCCCCCcch-h
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (287)
                      +||+||...                    .++.+++++    +++..++|++||...+...          ..+...| .
T Consensus       111 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~~Y~a  180 (283)
T 1g0o_A          111 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA----------VPKHAVYSG  180 (283)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS----------CSSCHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC----------CCCCcchHH
Confidence            999998632                    122233333    4455799999997653211          1112334 8


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC----------hhHHHHHHHHc--CCCccCCCCCCceeeeee
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP----------VEEWFFHRLKA--GRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~  191 (287)
                      +|...+.+.+       ..++++.+++||.+.++.....          ...........  ..+         ...+.+
T Consensus       181 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~  251 (283)
T 1g0o_A          181 SKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP---------LRRVGL  251 (283)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT---------TCSCBC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC---------CCCCcC
Confidence            9998887663       3589999999999987621000          00111111111  111         113578


Q ss_pred             HHHHHHHHHHHHcCCc--cCCceEEecCCc
Q 023110          192 VKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       192 ~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      .+|+|++++.++....  ..|+.+++.++.
T Consensus       252 p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          252 PIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            9999999999986532  368899998874

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.66  E-value=8.5e-16  Score=123.83  Aligned_cols=183  Identities=13%  Similarity=0.161  Sum_probs=122.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|+||++++++|+++|++|++++|+.... +.+            ..+.++ +|+  .+++..+++.. ++|+|||+
T Consensus        25 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-~~~------------~~~~~~-~D~--~~~~~~~~~~~~~iD~lv~~   88 (249)
T 1o5i_A           25 LAASRGIGRAVADVLSQEGAEVTICARNEELL-KRS------------GHRYVV-CDL--RKDLDLLFEKVKEVDILVLN   88 (249)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHT------------CSEEEE-CCT--TTCHHHHHHHSCCCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH-Hhh------------CCeEEE-eeH--HHHHHHHHHHhcCCCEEEEC
Confidence            79999999999999999999999999986321 111            256667 999  33444444433 79999999


Q ss_pred             CCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhh
Q 023110           80 NGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (287)
Q Consensus        80 a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (287)
                      ||....                    +    ++.+++.+.  +..++|++||...+...           .+...| .+|
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~sK  157 (249)
T 1o5i_A           89 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI-----------ENLYTSNSAR  157 (249)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTBHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC-----------CCCchHHHHH
Confidence            986321                    1    234455554  66899999998876421           122234 889


Q ss_pred             HHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHH-HHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      ...+.+.+       ..++++++++||.+.++.... ....... ......+         ...+.+++|+|++++.++.
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~i~~l~s  227 (249)
T 1o5i_A          158 MALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE-LLSEEKKKQVESQIP---------MRRMAKPEEIASVVAFLCS  227 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH-HSCHHHHHHHHTTST---------TSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc-cchhhHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcC
Confidence            98886653       358999999999999884210 0011111 1222111         1246789999999999886


Q ss_pred             CCc--cCCceEEecCCcc
Q 023110          205 NEK--ASRQVFNISGEKY  220 (287)
Q Consensus       205 ~~~--~~~~~~~i~~~~~  220 (287)
                      ...  ..|+.|++.++..
T Consensus       228 ~~~~~~tG~~~~vdgG~~  245 (249)
T 1o5i_A          228 EKASYLTGQTIVVDGGLS  245 (249)
T ss_dssp             GGGTTCCSCEEEESTTCC
T ss_pred             ccccCCCCCEEEECCCcc
Confidence            532  3588999998753

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.66  E-value=1.5e-16  Score=130.26  Aligned_cols=199  Identities=13%  Similarity=0.163  Sum_probs=133.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.....+...    .........+.++.+|+.|.+++.++++..     ++|+
T Consensus        33 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  108 (277)
T 4fc7_A           33 TGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAAR----KLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDI  108 (277)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHH----HHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998655321111    000111357899999999999888887643     7999


Q ss_pred             EEecCCCC--------------------cccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||..                    ..++.++.++    +.  +..++|++||...+....           ....|
T Consensus       109 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y  177 (277)
T 4fc7_A          109 LINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQA-----------LQVHA  177 (277)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCT-----------TCHHH
T ss_pred             EEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC-----------CcHHH
Confidence            99999853                    1123334443    32  457999999987653211           12234


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC--ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                       .+|...+.+.+       ..++++..++||.+.++....  ..............++         ..+.+.+|+|+++
T Consensus       178 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dvA~~v  248 (277)
T 4fc7_A          178 GSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL---------QRLGNKTEIAHSV  248 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTT---------SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCC---------CCCcCHHHHHHHH
Confidence             89998887653       358999999999998863100  0011122222232222         1356799999999


Q ss_pred             HHHHcCC--ccCCceEEecCCcccCH
Q 023110          200 VQVLGNE--KASRQVFNISGEKYVTF  223 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~~~s~  223 (287)
                      +.++...  ...|+.+++.++..+++
T Consensus       249 ~fL~s~~~~~itG~~i~vdGG~~~~~  274 (277)
T 4fc7_A          249 LYLASPLASYVTGAVLVADGGAWLTF  274 (277)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTHHHHC
T ss_pred             HHHcCCccCCcCCCEEEECCCcccCC
Confidence            9998743  24789999999875543

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.66  E-value=1.4e-15  Score=122.73  Aligned_cols=184  Identities=16%  Similarity=0.219  Sum_probs=124.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+....                ..+.++.+|+.|++++.++++..     ++|+
T Consensus        27 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~   90 (253)
T 2nm0_A           27 TGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------------EGFLAVKCDITDTEQVEQAYKEIEETHGPVEV   90 (253)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTSHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh----------------ccceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986541                34788999999999988887632     5799


Q ss_pred             EEecCCCCc--------------------ccHHHHHH----hCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~----~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++..+++    .+.  +..++|++||...+...           .+...|
T Consensus        91 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  159 (253)
T 2nm0_A           91 LIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS-----------AGQANY  159 (253)
T ss_dssp             EEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH-----------HHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC-----------CCcHHH
Confidence            999998631                    11223333    332  56799999997654211           112234


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                       .+|...+.+.+       ..++++.+++||.+.++.... +............+         ...+++.+|+|++++.
T Consensus       160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p---------~~~~~~p~dvA~~i~~  229 (253)
T 2nm0_A          160 AASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV-LTDEQRANIVSQVP---------LGRYARPEEIAATVRF  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------CHHHHHTTCT---------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence             89998887653       357999999999987763211 10001111111111         1236789999999999


Q ss_pred             HHcCCc--cCCceEEecCCccc
Q 023110          202 VLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (287)
                      ++....  ..|+.+.+.++..+
T Consensus       230 l~s~~~~~~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          230 LASDDASYITGAVIPVDGGLGM  251 (253)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTC
T ss_pred             HhCccccCCcCcEEEECCcccc
Confidence            986542  36889999887543

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.66  E-value=7.4e-16  Score=125.43  Aligned_cols=196  Identities=21%  Similarity=0.225  Sum_probs=125.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++.+++.....+.+.    ..+......+.++.+|+.|.+++.++++..     ++|+
T Consensus        33 TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  108 (267)
T 3u5t_A           33 TGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVA----GKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDV  108 (267)
T ss_dssp             ESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998665543221111    111222357889999999999988887643     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CCCCccEEEEecceeeccCCCCCCCCCCCCCCCcchhh
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  131 (287)
                      +||+||...                    .++..++++    ++...++|++||...+.....          ...|..+
T Consensus       109 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~Y~as  178 (267)
T 3u5t_A          109 LVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPS----------YGIYAAA  178 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTT----------CHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCC----------chHHHHH
Confidence            999998731                    122233333    223358999999776432111          1123499


Q ss_pred             hHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      |...+.+.+       ..++++..++||.+..+..................+         ...+...+|+|++++.++.
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L~s  249 (267)
T 3u5t_A          179 KAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAP---------LERLGTPQDIAGAVAFLAG  249 (267)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSST---------TCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhC
Confidence            999887663       358999999999998764211111111122222211         1245679999999999986


Q ss_pred             CCc--cCCceEEecCCc
Q 023110          205 NEK--ASRQVFNISGEK  219 (287)
Q Consensus       205 ~~~--~~~~~~~i~~~~  219 (287)
                      ...  ..|+.+++.++.
T Consensus       250 ~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          250 PDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             TTTTTCCSEEEEESSSC
T ss_pred             ccccCccCCEEEeCCCc
Confidence            543  378889888763

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.66  E-value=1.6e-15  Score=124.17  Aligned_cols=206  Identities=12%  Similarity=0.095  Sum_probs=131.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccc---------ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA---------QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-   70 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-   70 (287)
                      |||+|.||+++++.|+++|++|++++|+.....         +.+.+ ....+......+.++.+|+.|.+++.++++. 
T Consensus        17 TGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   95 (277)
T 3tsc_A           17 TGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSE-TVRLVEAANRRIVAAVVDTRDFDRLRKVVDDG   95 (277)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHH-HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHH-HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            799999999999999999999999998532100         00000 0011112235788999999999999888864 


Q ss_pred             ----CCccEEEecCCCCcc--------------------cHHHHHHh----CC--C-CccEEEEecceeeccCCCCCCCC
Q 023110           71 ----KGFDVVYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCE  119 (287)
Q Consensus        71 ----~~~d~vi~~a~~~~~--------------------~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e  119 (287)
                          .++|++||+||....                    ++..++++    +.  + ..++|++||...+...       
T Consensus        96 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  168 (277)
T 3tsc_A           96 VAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ-------  168 (277)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC-------
Confidence                269999999987321                    22233333    32  2 4689999998764321       


Q ss_pred             CCCCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCc-cCCCCCCceeeee
Q 023110          120 TDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQLG  190 (287)
Q Consensus       120 ~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i  190 (287)
                          .....| .+|...+.+.+       ..++++..++||.+.++.................... ...... ....+.
T Consensus       169 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~r~~  243 (277)
T 3tsc_A          169 ----PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPF-LPDWVA  243 (277)
T ss_dssp             ----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCS-SSCSCB
T ss_pred             ----CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhc-cCCCCC
Confidence                112234 99998887663       3589999999999988742211111111111111111 111111 112478


Q ss_pred             eHHHHHHHHHHHHcCCc--cCCceEEecCCc
Q 023110          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       191 ~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      +.+|+|++++.++....  ..|+.+++.++.
T Consensus       244 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          244 EPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            99999999999986543  368899999875

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.66  E-value=7.2e-16  Score=126.48  Aligned_cols=197  Identities=16%  Similarity=0.131  Sum_probs=129.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcC---CeEEEEecCCChHHHHhhhhcC-----C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS---KILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~D~~d~~~~~~~~~~~-----~   72 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..     ..+.....   ++.++.+|+.|.+++.++++..     +
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (280)
T 1xkq_A           12 TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETR-----QIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK   86 (280)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            799999999999999999999999999865422111     00111012   6889999999999888887642     6


Q ss_pred             ccEEEecCCCCcc------------------------cHHHHHHh----CC-CCccEEEEecceeeccCCCCCCCCCCCC
Q 023110           73 FDVVYDINGREAD------------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (287)
                      +|+|||+||....                        ++.+++++    +. ...++|++||...+...          .
T Consensus        87 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  156 (280)
T 1xkq_A           87 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA----------Q  156 (280)
T ss_dssp             CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC----------C
T ss_pred             CCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCC----------C
Confidence            9999999986311                        12223333    22 12799999998765321          0


Q ss_pred             CCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC--hh------HHHHHHHHcCCCccCCCCCCcee
Q 023110          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VE------EWFFHRLKAGRPIPIPGSGIQVT  187 (287)
Q Consensus       124 ~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~  187 (287)
                      .+...| .+|...+.+.+       ..++++.+++||.+.++.....  ..      ..+.....  ...+       ..
T Consensus       157 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~p-------~~  227 (280)
T 1xkq_A          157 PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHK--ECIP-------IG  227 (280)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT--TTCT-------TS
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHH--cCCC-------CC
Confidence            122334 89998887663       3589999999999988731110  00      00111111  1111       12


Q ss_pred             eeeeHHHHHHHHHHHHcCC---ccCCceEEecCCccc
Q 023110          188 QLGHVKDLARAFVQVLGNE---KASRQVFNISGEKYV  221 (287)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~---~~~~~~~~i~~~~~~  221 (287)
                      .+.+.+|+|++++.++...   ...|+.+++.++..+
T Consensus       228 ~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~  264 (280)
T 1xkq_A          228 AAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  264 (280)
T ss_dssp             SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence            4678999999999998643   236889999988643

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.66  E-value=8.3e-17  Score=134.69  Aligned_cols=213  Identities=15%  Similarity=0.099  Sum_probs=139.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccC--CCC---ChhhhhhhcCCeEEEEecCCChHHHHhhhhcC----
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL--PGE---SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--~~~---~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~----   71 (287)
                      |||+|.||+++++.|+++|++|++++|+........  ...   ....+......+.++.+|+.|.+++.++++..    
T Consensus        33 TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  112 (322)
T 3qlj_A           33 TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETF  112 (322)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            899999999999999999999999998721100000  000   00111112356888999999999988887643    


Q ss_pred             -CccEEEecCCCCc--------------------ccHHHHHHhCC------C------CccEEEEecceeeccCCCCCCC
Q 023110           72 -GFDVVYDINGREA--------------------DEVEPILDALP------N------LEQFIYCSSAGVYLKSDLLPHC  118 (287)
Q Consensus        72 -~~d~vi~~a~~~~--------------------~~~~~ll~~~~------~------~~~~i~~Ss~~v~~~~~~~~~~  118 (287)
                       ++|++||+||...                    .++..+++++.      +      ..++|++||...+....     
T Consensus       113 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~-----  187 (322)
T 3qlj_A          113 GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSV-----  187 (322)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCBT-----
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCCC-----
Confidence             7999999999732                    11223333321      1      25899999987653211     


Q ss_pred             CCCCCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeee
Q 023110          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       119 e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                            ....| .+|..++.+.+       ..++++..++|| +..+....... ...            ......+.++
T Consensus       188 ------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~-~~~------------~~~~~~~~~~  247 (322)
T 3qlj_A          188 ------GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFA-EMM------------ATQDQDFDAM  247 (322)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCC-C--------------------CCTT
T ss_pred             ------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhh-hhh------------hccccccCCC
Confidence                  12234 99998887663       368999999999 65543211110 000            0111223456


Q ss_pred             eHHHHHHHHHHHHcCCc--cCCceEEecCCccc-----------------CHHHHHHHHHHHhCCCC
Q 023110          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEKYV-----------------TFDGLARACAKAAGFPE  238 (287)
Q Consensus       191 ~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~-----------------s~~e~~~~i~~~~g~~~  238 (287)
                      +.+|+|.+++.++....  ..|+.+++.++...                 +..|+++.+.+.+|.+.
T Consensus       248 ~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~  314 (322)
T 3qlj_A          248 APENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKAR  314 (322)
T ss_dssp             CGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSC
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccC
Confidence            79999999999986533  36889999998755                 77999999999998654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.66  E-value=4.9e-16  Score=127.11  Aligned_cols=195  Identities=15%  Similarity=0.184  Sum_probs=128.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+...     .+.. ..++.++.+|+.|.+++.++++..     ++|+
T Consensus        35 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~-----~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (276)
T 2b4q_A           35 TGGSRGIGQMIAQGLLEAGARVFICARDAEACADTAT-----RLSA-YGDCQAIPADLSSEAGARRLAQALGELSARLDI  108 (276)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----HHTT-SSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHh-cCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654221110     0110 126888999999999888887642     7999


Q ss_pred             EEecCCCCc--------------------ccH----HHHHHhCC--CC----ccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           76 VYDINGREA--------------------DEV----EPILDALP--NL----EQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~----~~ll~~~~--~~----~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      +||+||...                    .++    +.++..++  +.    .++|++||...+....          ..
T Consensus       109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~----------~~  178 (276)
T 2b4q_A          109 LVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG----------EQ  178 (276)
T ss_dssp             EEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC----------CS
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC----------CC
Confidence            999998631                    112    22333332  33    7999999987653211          11


Q ss_pred             C-cchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          126 K-SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       126 ~-~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      . .|..+|..++.+.+       ..++++.+++||.+.++.... ...............+.       ..+.+.+|+|+
T Consensus       179 ~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p~-------~r~~~p~dvA~  250 (276)
T 2b4q_A          179 AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH-IANDPQALEADSASIPM-------GRWGRPEEMAA  250 (276)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH-HHHCHHHHHHHHHTSTT-------SSCCCHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh-cchhHHHHHHhhcCCCC-------CCcCCHHHHHH
Confidence            2 35599999887663       358999999999998874211 11111111111001111       23678999999


Q ss_pred             HHHHHHcCC--ccCCceEEecCCc
Q 023110          198 AFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      +++.++...  ...|+.+++.++.
T Consensus       251 ~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          251 LAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhCccccCCCCCEEEeCCCc
Confidence            999998654  2368899998874

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.66  E-value=1.4e-15  Score=124.16  Aligned_cols=202  Identities=14%  Similarity=0.111  Sum_probs=133.9

Q ss_pred             CCcc--cchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+  |+||++++++|+++|++|++++|+... .+.+.     .+......+.++.+|+.|.+++.++++..     ++
T Consensus        20 TGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~-----~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   93 (271)
T 3ek2_A           20 TGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRIT-----EFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSL   93 (271)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHH-----HHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCE
T ss_pred             eCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHH-----HHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            7988  999999999999999999999998432 11111     11111345889999999999998888743     78


Q ss_pred             cEEEecCCCCcc-------------------------cHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        74 d~vi~~a~~~~~-------------------------~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      |++||+||....                         ++..+++++.    ...++|++||...+...           .
T Consensus        94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~  162 (271)
T 3ek2_A           94 DGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAI-----------P  162 (271)
T ss_dssp             EEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----------T
T ss_pred             CEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCC-----------C
Confidence            999999986421                         1233444433    24589999998764321           1


Q ss_pred             CCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       125 ~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      +...| .+|...+.+.+       ..++++..++||.+.++...... ............+.         ..+.+.+|+
T Consensus       163 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~pedv  233 (271)
T 3ek2_A          163 NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL---------KRNVTIEQV  233 (271)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc---------CCCCCHHHH
Confidence            22234 89998887653       35899999999999887532211 12233333332222         134568999


Q ss_pred             HHHHHHHHcCC--ccCCceEEecCCcccCHHHHHH
Q 023110          196 ARAFVQVLGNE--KASRQVFNISGEKYVTFDGLAR  228 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~~~s~~e~~~  228 (287)
                      |++++.++...  ...|+.+++.++..++..++.+
T Consensus       234 a~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          234 GNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             HHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred             HHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence            99999998753  3478999999998877666543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.65  E-value=6.3e-16  Score=125.01  Aligned_cols=188  Identities=17%  Similarity=0.084  Sum_probs=125.0

Q ss_pred             CCcccchHHHHHHHHHHcCCe-EEEEEcCCccccccCCCCChhhhhhh--cCCeEEEEecCCCh-HHHHhhhhcC-----
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDY-DFVKSSLSAK-----   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~D~~d~-~~~~~~~~~~-----   71 (287)
                      |||+|+||++++++|+++|++ |++++|+.....  +     ..+.+.  ..++.++.+|+.|+ +++.++++..     
T Consensus        11 tGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~--~-----~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A           11 VAALGGIGLDTSRELVKRNLKNFVILDRVENPTA--L-----AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHH--H-----HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             ECCCChHHHHHHHHHHHCCCcEEEEEecCchHHH--H-----HHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            799999999999999999997 999999864210  0     011111  23688999999998 8887777632     


Q ss_pred             CccEEEecCCCC------------cccHHHHHHh----CC--C---CccEEEEecceeeccCCCCCCCCCCCCCCCcch-
Q 023110           72 GFDVVYDINGRE------------ADEVEPILDA----LP--N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        72 ~~d~vi~~a~~~------------~~~~~~ll~~----~~--~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (287)
                      ++|+|||+||..            ..++.+++++    +.  +   ..++|++||...+...           .+...| 
T Consensus        84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~  152 (254)
T 1sby_A           84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI-----------HQVPVYS  152 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------TTSHHHH
T ss_pred             CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC-----------CCchHHH
Confidence            799999999863            2233344444    32  1   4679999998775321           122234 


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC--Chh--HHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN--PVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      .+|...|.+.+       ..++++++++||.+.++....  ...  .........            ...+.+++|+|++
T Consensus       153 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~dvA~~  220 (254)
T 1sby_A          153 ASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL------------SHPTQTSEQCGQN  220 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT------------TSCCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh------------cCCCCCHHHHHHH
Confidence            89999887663       258999999999998873100  000  000011111            1123489999999


Q ss_pred             HHHHHcCCccCCceEEecCCc
Q 023110          199 FVQVLGNEKASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~~~~~~~~~i~~~~  219 (287)
                      ++.+++.. ..|+.|++.++.
T Consensus       221 i~~~~~~~-~~G~~~~v~gG~  240 (254)
T 1sby_A          221 FVKAIEAN-KNGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHHHC-CTTCEEEEETTE
T ss_pred             HHHHHHcC-CCCCEEEEeCCc
Confidence            99988743 368899999873

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.65  E-value=3.9e-16  Score=127.17  Aligned_cols=195  Identities=15%  Similarity=0.139  Sum_probs=132.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh--cCCeEEEEecCCChHHHHhhhhcC-CccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-GFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi   77 (287)
                      |||+|.||++++++|+++|++|++++|+.....+...     .+...  ...+..+.+|+.+.+++.+++++. ++|++|
T Consensus        16 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv   90 (267)
T 3t4x_A           16 TGSTAGIGKAIATSLVAEGANVLINGRREENVNETIK-----EIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILI   90 (267)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----HHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence            8999999999999999999999999998765321111     11111  235778999999999999888765 799999


Q ss_pred             ecCCCCc--------------------cc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-h
Q 023110           78 DINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        78 ~~a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (287)
                      |+||...                    .+    ++.++..+.  +..++|++||...+..           ..+...| .
T Consensus        91 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~a  159 (267)
T 3t4x_A           91 NNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMP-----------SQEMAHYSA  159 (267)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSC-----------CTTCHHHHH
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccC-----------CCcchHHHH
Confidence            9999731                    11    233344443  5579999999876522           1222345 9


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHH---------------HHHcC-CCccCCCCCCcee
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH---------------RLKAG-RPIPIPGSGIQVT  187 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~---------------~~~~~-~~~~~~~~~~~~~  187 (287)
                      +|...+.+.+       ..++++..++||.+.++.     ...++.               ..... .+.      ....
T Consensus       160 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  228 (267)
T 3t4x_A          160 TKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEG-----VETMLNSLYPNEQLTIEEAEKRFMKENRPT------SIIQ  228 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHH-----HHHHHHHSSTTSCCCHHHHHHHHHHHHCTT------CSSC
T ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCcc-----HHHHHhhcCcccCCCHHHHHHHHhhccCCc------cccc
Confidence            9998887663       246899999999987752     111111               11110 000      0123


Q ss_pred             eeeeHHHHHHHHHHHHcCC--ccCCceEEecCCcccC
Q 023110          188 QLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (287)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (287)
                      .+.+++|+|++++.++...  ...|+.+++.++...+
T Consensus       229 r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          229 RLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             SCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             CccCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            5788999999999998643  2378999999987654

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.65  E-value=1.3e-15  Score=124.16  Aligned_cols=198  Identities=17%  Similarity=0.155  Sum_probs=129.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.......         .....++.++.+|+.|.+++.++++..     ++|+
T Consensus        15 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A           15 TGGGRGIGAGIVRAFVNSGARVVICDKDESGGRAL---------EQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542111         111235789999999999988887643     7899


Q ss_pred             EEecCCCCc---------------------ccHHHHHHhC----C-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA---------------------DEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                     .++.++++++    . +..++|++||...+....          ....|.
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~  155 (270)
T 1yde_A           86 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA----------QAVPYV  155 (270)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT----------TCHHHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC----------CCcccH
Confidence            999998631                     1122333332    2 357999999976432111          111244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-----ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      .+|...+.+.+       ..++++.+++||.++++....     ......+.......++         ..+.+.+|+|+
T Consensus       156 asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva~  226 (270)
T 1yde_A          156 ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL---------GRMGQPAEVGA  226 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT---------SSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCC---------CCCcCHHHHHH
Confidence            99998887663       358999999999999873100     0000001111111111         12467999999


Q ss_pred             HHHHHHcCC-ccCCceEEecCCcccCHHHH
Q 023110          198 AFVQVLGNE-KASRQVFNISGEKYVTFDGL  226 (287)
Q Consensus       198 ~~~~~~~~~-~~~~~~~~i~~~~~~s~~e~  226 (287)
                      +++.++... ...|+.+++.++..+.+...
T Consensus       227 ~v~~L~s~~~~itG~~i~vdGG~~~~~~~~  256 (270)
T 1yde_A          227 AAVFLASEANFCTGIELLVTGGAELGYGCK  256 (270)
T ss_dssp             HHHHHHHHCTTCCSCEEEESTTTTSCC---
T ss_pred             HHHHHcccCCCcCCCEEEECCCeecccCcC
Confidence            999888642 33688999999876654433

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.65  E-value=1e-14  Score=119.86  Aligned_cols=194  Identities=13%  Similarity=0.064  Sum_probs=129.3

Q ss_pred             CCcc--cchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+  |+||+++++.|+++|++|++++|+... .+.+     ..+......+.++.+|+.|.+++.++++..     ++
T Consensus        27 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  100 (285)
T 2p91_A           27 TGVANERSIAYGIAKSFHREGAQLAFTYATPKL-EKRV-----REIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSL  100 (285)
T ss_dssp             CCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             ECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHH-HHHH-----HHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            7998  999999999999999999999998641 1111     111111134788999999999888887642     78


Q ss_pred             cEEEecCCCCcc------------------------cHHHHHHhCC-----CCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD------------------------EVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      |++||+||....                        ++..+++++.     +..++|++||...+...           .
T Consensus       101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~  169 (285)
T 2p91_A          101 DIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV-----------P  169 (285)
T ss_dssp             CEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC-----------T
T ss_pred             CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC-----------C
Confidence            999999986421                        1223444432     33699999997664321           1


Q ss_pred             CCc-chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          125 PKS-RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       125 ~~~-~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      +.. |..+|..++.+.+       ..++++.+++||.+.++..... ....+........++         ..+.+++|+
T Consensus       170 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dv  240 (285)
T 2p91_A          170 HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF---------GKPITIEDV  240 (285)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC---------CCCcCHHHH
Confidence            122 3489998887663       3589999999999999853221 112222232222222         124679999


Q ss_pred             HHHHHHHHcCCc--cCCceEEecCCcc
Q 023110          196 ARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      |++++.++....  ..|+.|++.++..
T Consensus       241 a~~~~~l~s~~~~~~tG~~~~vdgg~~  267 (285)
T 2p91_A          241 GDTAVFLCSDWARAITGEVVHVDNGYH  267 (285)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHcCCcccCCCCCEEEECCCcc
Confidence            999999986432  2678999998753

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.64  E-value=7.6e-16  Score=125.09  Aligned_cols=191  Identities=18%  Similarity=0.253  Sum_probs=129.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+...        +...++.++.+|+.|.+++.++++..     ++|+
T Consensus        12 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A           12 TGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA--------ALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------TCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            7999999999999999999999999998654321111        11246889999999999988887642     6899


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CCCCccEEEEecceeeccCCCCCCCCCCCCCCCcch-h
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (287)
                      +||+||...                    .++..++++    ++...++|++||...++.            .+...| .
T Consensus        84 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------~~~~~Y~a  151 (263)
T 2a4k_A           84 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA------------FGLAHYAA  151 (263)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH------------HHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCC------------CCcHHHHH
Confidence            999998632                    122233333    222469999999876521            011234 8


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      +|...+.+.+       ..++++.+++||.+.++.... .............+.         ..+.+.+|+|++++.++
T Consensus       152 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~~~p~dvA~~v~~l~  221 (263)
T 2a4k_A          152 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG-LPPWAWEQEVGASPL---------GRAGRPEEVAQAALFLL  221 (263)
T ss_dssp             CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT-SCHHHHHHHHHTSTT---------CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHh
Confidence            8887776553       358999999999998874221 112222222222211         13578999999999998


Q ss_pred             cCCc--cCCceEEecCCccc
Q 023110          204 GNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       204 ~~~~--~~~~~~~i~~~~~~  221 (287)
                      ....  ..|+.+++.++..+
T Consensus       222 s~~~~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          222 SEESAYITGQALYVDGGRSI  241 (263)
T ss_dssp             SGGGTTCCSCEEEESTTTTT
T ss_pred             CccccCCcCCEEEECCCccc
Confidence            6532  36889999988644

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.64  E-value=4.8e-15  Score=120.63  Aligned_cols=197  Identities=9%  Similarity=0.057  Sum_probs=132.1

Q ss_pred             CCcccc--hHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhc-CCeEEEEecCCChHHHHhhhhcC-----C
Q 023110            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~--iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~D~~d~~~~~~~~~~~-----~   72 (287)
                      |||+|+  ||++++++|+++|++|++++|+.... +.+.    ....+.. .++.++.+|+.|.+++.++++..     +
T Consensus        13 TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (266)
T 3oig_A           13 MGVANKRSIAWGIARSLHEAGARLIFTYAGERLE-KSVH----ELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGV   87 (266)
T ss_dssp             ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHH----HHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSC
T ss_pred             EcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHH-HHHH----HHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            799988  99999999999999999999985431 1110    0001111 26899999999999988887643     7


Q ss_pred             ccEEEecCCCCc------------------------ccHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           73 FDVVYDINGREA------------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        73 ~d~vi~~a~~~~------------------------~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      +|++||+||...                        .++..+++++.    ...++|++||...+..           ..
T Consensus        88 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~  156 (266)
T 3oig_A           88 IHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV-----------MP  156 (266)
T ss_dssp             CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-----------CT
T ss_pred             eeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc-----------CC
Confidence            899999998642                        11223444432    3468999999776422           11


Q ss_pred             CCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       125 ~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      ....| .+|...+.+.+       ..++++..++||.+.++..... .............+.         ..+.+.+|+
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~p~dv  227 (266)
T 3oig_A          157 NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL---------RRTTTPEEV  227 (266)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC---------CCCCCHHHH
Confidence            22334 89998887653       3589999999999988642211 112233333322222         134679999


Q ss_pred             HHHHHHHHcCCc--cCCceEEecCCcccC
Q 023110          196 ARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      |++++.++....  ..|+.+++.++....
T Consensus       228 a~~v~~l~s~~~~~~tG~~i~vdGG~~~~  256 (266)
T 3oig_A          228 GDTAAFLFSDMSRGITGENLHVDSGFHIT  256 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHcCCchhcCcCCEEEECCCeEEe
Confidence            999999997533  478899999986543

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.64  E-value=4.6e-16  Score=127.58  Aligned_cols=183  Identities=17%  Similarity=0.182  Sum_probs=119.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh--cCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||++++++|+++|++|++++|+........     ..+...  ...+.++.+|+.|.+++.++++..     ++
T Consensus        38 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  112 (279)
T 1xg5_A           38 TGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-----AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV  112 (279)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHH-----HHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999865421110     001100  135788999999999988887632     69


Q ss_pred             cEEEecCCCCcc--------------------c----HHHHHHhCC--CC--ccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD--------------------E----VEPILDALP--NL--EQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~--------------------~----~~~ll~~~~--~~--~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |+|||+||....                    +    ++.+++.++  +.  .++|++||...+...         +..+
T Consensus       113 D~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~---------~~~~  183 (279)
T 1xg5_A          113 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL---------PLSV  183 (279)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC---------SCGG
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccC---------CCCC
Confidence            999999986311                    1    455666665  43  799999998765321         1122


Q ss_pred             Ccch-hhhHHHHHHhh---------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          126 KSRH-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      ...| .+|..++.+.+         ..++++.+++||.+.++..     .    .......... ........+++.+|+
T Consensus       184 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~-----~----~~~~~~~~~~-~~~~~~~~~~~~~dv  253 (279)
T 1xg5_A          184 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA-----F----KLHDKDPEKA-AATYEQMKCLKPEDV  253 (279)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHH-----H----HHTTTCHHHH-HHHHC---CBCHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhh-----h----hhcccChhHH-hhhcccccCCCHHHH
Confidence            2334 89998876552         4579999999999987621     0    0000000000 000011246789999


Q ss_pred             HHHHHHHHcCCc
Q 023110          196 ARAFVQVLGNEK  207 (287)
Q Consensus       196 a~~~~~~~~~~~  207 (287)
                      |++++.++..+.
T Consensus       254 A~~i~~l~~~~~  265 (279)
T 1xg5_A          254 AEAVIYVLSTPA  265 (279)
T ss_dssp             HHHHHHHHHSCT
T ss_pred             HHHHHHHhcCCc
Confidence            999999997654

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.64  E-value=8.1e-15  Score=120.17  Aligned_cols=194  Identities=9%  Similarity=0.073  Sum_probs=131.7

Q ss_pred             CCcccc--hHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~--iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+|+  ||++++++|+++|++|++++|+...  +.+     ..+......+.++.+|+.|.+++.++++..     ++
T Consensus        32 TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~--~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  104 (280)
T 3nrc_A           32 TGLLSNKSIAYGIAKAMHREGAELAFTYVGQFK--DRV-----EKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGL  104 (280)
T ss_dssp             CCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCH--HHH-----HHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred             ECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHH--HHH-----HHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            799977  9999999999999999999998721  111     111111346889999999999988888643     68


Q ss_pred             cEEEecCCCCcc-------------------------cHHHHHHh----CC-CCccEEEEecceeeccCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD-------------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        74 d~vi~~a~~~~~-------------------------~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (287)
                      |++||+||....                         ++..++++    +. +..++|++||...+..           .
T Consensus       105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~  173 (280)
T 3nrc_A          105 DAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKA-----------M  173 (280)
T ss_dssp             CEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSC-----------C
T ss_pred             CEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccC-----------C
Confidence            999999986421                         12223333    33 4579999999876432           1


Q ss_pred             CCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHH
Q 023110          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       124 ~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      .+...| .+|...+.+.+       ..++++..++||.+.++.... ..............+.         ..+.+.+|
T Consensus       174 ~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~ped  244 (280)
T 3nrc_A          174 PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL---------KKNVDIME  244 (280)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT---------CSCCCHHH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC---------CCCCCHHH
Confidence            122334 89998887653       368999999999998874221 1112233333222222         13466899


Q ss_pred             HHHHHHHHHcCCc--cCCceEEecCCccc
Q 023110          195 LARAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (287)
                      +|++++.++....  ..|+.+++.++..+
T Consensus       245 vA~~v~~l~s~~~~~~tG~~i~vdgG~~~  273 (280)
T 3nrc_A          245 VGNTVAFLCSDMATGITGEVVHVDAGYHC  273 (280)
T ss_dssp             HHHHHHHTTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHhCcccCCcCCcEEEECCCccc
Confidence            9999999987532  47899999998654

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.64  E-value=7.5e-15  Score=121.30  Aligned_cols=196  Identities=12%  Similarity=0.071  Sum_probs=133.0

Q ss_pred             CCccc--chHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+|  .||+++++.|+++|++|++++|+.... +.+.     ........+.++++|+.|.+++.++++..     ++
T Consensus        36 TGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~-~~~~-----~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (296)
T 3k31_A           36 IGVANDKSLAWGIAKAVCAQGAEVALTYLSETFK-KRVD-----PLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSL  109 (296)
T ss_dssp             ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHH-----HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             EeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHH-HHHH-----HHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            69987  999999999999999999999985431 1111     11111245789999999999998888743     78


Q ss_pred             cEEEecCCCCcc------------------------cHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |++||+||....                        ++..+++++.    ...++|++||...+...           ..
T Consensus       110 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~-----------~~  178 (296)
T 3k31_A          110 DFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV-----------PH  178 (296)
T ss_dssp             SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC-----------TT
T ss_pred             CEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC-----------CC
Confidence            999999986421                        1333444432    34589999998764221           12


Q ss_pred             Ccch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ...| .+|..++.+.+       ..++++..++||.+.++...... ............++.         .+...+|+|
T Consensus       179 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~---------r~~~pedvA  249 (296)
T 3k31_A          179 YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLR---------RNTTLDDVG  249 (296)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTS---------SCCCHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCC---------CCCCHHHHH
Confidence            2234 89998887653       35899999999999987533221 122223332222221         245689999


Q ss_pred             HHHHHHHcCC--ccCCceEEecCCcccC
Q 023110          197 RAFVQVLGNE--KASRQVFNISGEKYVT  222 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (287)
                      ++++.++...  ...|+.+++.++..++
T Consensus       250 ~~v~fL~s~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          250 GAALYLLSDLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHcCCccCCccCCEEEECCCcccc
Confidence            9999998753  3378999999987654

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.64  E-value=2.8e-15  Score=123.07  Aligned_cols=202  Identities=15%  Similarity=0.133  Sum_probs=131.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+...     .+......+.++++|+.|.+++.++++..     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (283)
T 3v8b_A           34 TGAGSGIGRATALALAADGVTVGALGRTRTEVEEVAD-----EIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDI  108 (283)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----HHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998765321110     11111357889999999999988888753     7999


Q ss_pred             EEecCCCCc---------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA---------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||...                     .++..+++++    +  +..++|++||...+...         +..+...
T Consensus       109 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~---------~~~~~~~  179 (283)
T 3v8b_A          109 VVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF---------TTPGATA  179 (283)
T ss_dssp             EEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC---------CSTTCHH
T ss_pred             EEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC---------CCCCchH
Confidence            999999631                     1233344443    3  56799999997654211         1112233


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCce--eeeeeHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV--TQLGHVKDLARA  198 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~D~a~~  198 (287)
                      | .+|...+.+.+       ..++++..++||.+..+.........-  .. ...+..........  ..+...+|+|++
T Consensus       180 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~--~~-~~~~~~~~~~~~p~~~~r~~~pedvA~~  256 (283)
T 3v8b_A          180 YTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHE--EE-TAIPVEWPKGQVPITDGQPGRSEDVAEL  256 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCH--HH-HSCCCBCTTCSCGGGTTCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccc--hh-hhhhhhhhhhcCccccCCCCCHHHHHHH
Confidence            4 99998887663       357999999999998875321110000  00 00011111111111  245678999999


Q ss_pred             HHHHHcCCc--cCCceEEecCCc
Q 023110          199 FVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++.++....  -.|+.+++.++.
T Consensus       257 v~fL~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          257 IRFLVSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHcCccccCCcCCEEEECcCc
Confidence            999986533  368899998875

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.64  E-value=4.1e-15  Score=120.00  Aligned_cols=180  Identities=15%  Similarity=0.109  Sum_probs=112.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC----CccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~----~~d~v   76 (287)
                      |||+|.||++++++|+++|++|++++|+.....+..     ..+.....++.++.+|+.|.+++.++++..    ++|++
T Consensus        13 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~l   87 (252)
T 3h7a_A           13 IGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLV-----AEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEVT   87 (252)
T ss_dssp             ECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceEE
Confidence            799999999999999999999999999876532211     111112357899999999999998888743    78999


Q ss_pred             EecCCCCc--------------------ccHHHH----HHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-
Q 023110           77 YDINGREA--------------------DEVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        77 i~~a~~~~--------------------~~~~~l----l~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (287)
                      ||+||...                    .++..+    +..++  +..++|++||...+...           .....| 
T Consensus        88 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~  156 (252)
T 3h7a_A           88 IFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG-----------SGFAAFA  156 (252)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC-----------TTCHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC-----------CCCccHH
Confidence            99999732                    122223    33333  55799999997764221           122334 


Q ss_pred             hhhHHHHHHhh-------hCCCcE-EEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNW-TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~-~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      .+|...+.+.+       ..++++ .++.||.+..+..... ......         ......... +.+.+|+|++++.
T Consensus       157 asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~-~~~~~~---------~~~~~~~~~-~~~pedvA~~~~~  225 (252)
T 3h7a_A          157 SAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER-REQMFG---------KDALANPDL-LMPPAAVAGAYWQ  225 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------------CCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc-chhhhh---------hhhhcCCcc-CCCHHHHHHHHHH
Confidence            99998886653       357889 8999999877632110 000000         001111123 7889999999999


Q ss_pred             HHcCCc
Q 023110          202 VLGNEK  207 (287)
Q Consensus       202 ~~~~~~  207 (287)
                      ++..+.
T Consensus       226 l~s~~~  231 (252)
T 3h7a_A          226 LYQQPK  231 (252)
T ss_dssp             HHHCCG
T ss_pred             HHhCch
Confidence            998654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.63  E-value=1e-14  Score=121.66  Aligned_cols=206  Identities=13%  Similarity=0.111  Sum_probs=130.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChh-------hhhhhcCCeEEEEecCCChHHHHhhhhcC--
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQ-------EFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--   71 (287)
                      |||+|.||+++++.|+++|++|++++|+..............       .+......+.++.+|+.|.+++.++++..  
T Consensus        52 TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  131 (317)
T 3oec_A           52 TGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALA  131 (317)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            799999999999999999999999998743311111000001       11122357889999999999988887643  


Q ss_pred             ---CccEEEecCCCCc--------------------ccHHHHHHh----CC---CCccEEEEecceeeccCCCCCCCCCC
Q 023110           72 ---GFDVVYDINGREA--------------------DEVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETD  121 (287)
Q Consensus        72 ---~~d~vi~~a~~~~--------------------~~~~~ll~~----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (287)
                         ++|++||+||...                    .++..++++    +.   ...++|++||...+...         
T Consensus       132 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~---------  202 (317)
T 3oec_A          132 EFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA---------  202 (317)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC---------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC---------
Confidence               7999999999732                    122333333    22   24679999998765321         


Q ss_pred             CCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcC---CC------ccCCCCCC
Q 023110          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RP------IPIPGSGI  184 (287)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~  184 (287)
                        .....| .+|..++.+.+       ..++++..++||.+.++....   ..........   ..      ...... .
T Consensus       203 --~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  276 (317)
T 3oec_A          203 --PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALN---EKLLKMFLPHLENPTREDAAELFSQLT-L  276 (317)
T ss_dssp             --TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHC---HHHHHHHCTTCSSCCHHHHHHHHTTTC-S
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccc---hhhhhhhhhhccccchhHHHHHHhhhc-c
Confidence              122334 89998887653       358999999999998863110   0001111000   00      000001 1


Q ss_pred             ceeeeeeHHHHHHHHHHHHcCCc--cCCceEEecCCccc
Q 023110          185 QVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       185 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (287)
                      ....+++.+|+|++++.++....  ..|+.+++.++...
T Consensus       277 ~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~  315 (317)
T 3oec_A          277 LPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA  315 (317)
T ss_dssp             SSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhh
Confidence            11467899999999999886432  37889999998643

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.63  E-value=3.3e-15  Score=121.86  Aligned_cols=178  Identities=18%  Similarity=0.164  Sum_probs=115.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..        .+...++.++.+|+.|.+++.++++..     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           34 TGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETA--------AEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865532111        112357899999999999998888643     7999


Q ss_pred             EEecCCCCcc---------------------c----HHHHHHhCC--C--CccEEEEecceeeccCCCCCCCCCCCCCCC
Q 023110           76 VYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~ll~~~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (287)
                      +||+||....                     +    ++.++..+.  +  ..++|++||...+..           ..+.
T Consensus       106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----------~~~~  174 (272)
T 4dyv_A          106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP-----------RPYS  174 (272)
T ss_dssp             EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC-----------CTTC
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC-----------CCCc
Confidence            9999987311                     1    222333333  2  469999999776421           1223


Q ss_pred             cch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      ..| .+|..++.+.+       ..++++..++||.+..+....     +.    .+....  ........+++++|+|++
T Consensus       175 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-----~~----~~~~~~--~~~~~~~~~~~pedvA~~  243 (272)
T 4dyv_A          175 APYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK-----MK----AGVPQA--DLSIKVEPVMDVAHVASA  243 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------------CHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh-----hc----ccchhh--hhcccccCCCCHHHHHHH
Confidence            334 99998887653       358999999999998773211     10    000000  001112347889999999


Q ss_pred             HHHHHcCCcc
Q 023110          199 FVQVLGNEKA  208 (287)
Q Consensus       199 ~~~~~~~~~~  208 (287)
                      ++.++..+..
T Consensus       244 v~fL~s~~~~  253 (272)
T 4dyv_A          244 VVYMASLPLD  253 (272)
T ss_dssp             HHHHHHSCTT
T ss_pred             HHHHhCCCCc
Confidence            9999987654

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.62  E-value=4.3e-15  Score=121.91  Aligned_cols=194  Identities=16%  Similarity=0.169  Sum_probs=132.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc----CCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~----~~~d~v   76 (287)
                      |||+|.||++++++|+++|++|++++|+.....+..        .+....+.++++|+.|.+++.++++.    .++|++
T Consensus        36 TGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           36 SGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALA--------DELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH--------HHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            799999999999999999999999999866532111        11235789999999999998888764    268999


Q ss_pred             Eec-CCCCc-------------------------ccHHHHHHhCC------------CCccEEEEecceeeccCCCCCCC
Q 023110           77 YDI-NGREA-------------------------DEVEPILDALP------------NLEQFIYCSSAGVYLKSDLLPHC  118 (287)
Q Consensus        77 i~~-a~~~~-------------------------~~~~~ll~~~~------------~~~~~i~~Ss~~v~~~~~~~~~~  118 (287)
                      ||+ ++...                         .++.++++++.            +..++|++||...+...      
T Consensus       108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  181 (281)
T 3ppi_A          108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ------  181 (281)
T ss_dssp             EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC------
T ss_pred             EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC------
Confidence            999 44311                         11222333221            33589999998765321      


Q ss_pred             CCCCCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeee
Q 023110          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       119 e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                           .+...| .+|...+.+.+       ..++++..++||.+..+.... .............+.        ...+.
T Consensus       182 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~--------~~~~~  247 (281)
T 3ppi_A          182 -----IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES-VGEEALAKFAANIPF--------PKRLG  247 (281)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-TCHHHHHHHHHTCCS--------SSSCB
T ss_pred             -----CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc-ccHHHHHHHHhcCCC--------CCCCC
Confidence                 122334 89998876653       358999999999997753111 112222233322221        02467


Q ss_pred             eHHHHHHHHHHHHcCCccCCceEEecCCcccC
Q 023110          191 HVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       191 ~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (287)
                      +.+|+|++++.++......|+.+++.++..++
T Consensus       248 ~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          248 TPDEFADAAAFLLTNGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             CHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred             CHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence            89999999999998766689999999987654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.62  E-value=1.7e-14  Score=118.94  Aligned_cols=196  Identities=10%  Similarity=0.071  Sum_probs=130.5

Q ss_pred             CCcccc--hHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~--iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+|+  ||+++++.|+++|++|++++|+... .+.+.     .+......+.++.+|+.|.+++.++++..     ++
T Consensus        37 TGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~-----~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  110 (293)
T 3grk_A           37 LGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-KKRVE-----PLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKL  110 (293)
T ss_dssp             ECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-HHHHH-----HHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             EcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHH-----HHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            799988  9999999999999999999998432 11111     11111346889999999999988887643     79


Q ss_pred             cEEEecCCCCc------------------------ccHHHHHHh----CCCCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREA------------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~------------------------~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |++||+||...                        .++..++++    ++...++|++||...+....           .
T Consensus       111 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~-----------~  179 (293)
T 3grk_A          111 DFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP-----------N  179 (293)
T ss_dssp             SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT-----------T
T ss_pred             CEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC-----------c
Confidence            99999999742                        112223333    33456999999987653211           1


Q ss_pred             Ccch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ...| .+|...+.+.+       ..++++..++||.+.++.... ..............+.         ..+...+|+|
T Consensus       180 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA  250 (293)
T 3grk_A          180 YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL---------RRTVTIDEVG  250 (293)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            2234 89998887653       358999999999998874221 1112223333322222         1245689999


Q ss_pred             HHHHHHHcCC--ccCCceEEecCCcccC
Q 023110          197 RAFVQVLGNE--KASRQVFNISGEKYVT  222 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (287)
                      ++++.++...  ...|+.+++.++..++
T Consensus       251 ~~v~~L~s~~~~~itG~~i~vdGG~~~~  278 (293)
T 3grk_A          251 DVGLYFLSDLSRSVTGEVHHADSGYHVI  278 (293)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHcCccccCCcceEEEECCCcccC
Confidence            9999998653  2478999999987543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.62  E-value=1.5e-15  Score=124.10  Aligned_cols=176  Identities=15%  Similarity=0.059  Sum_probs=120.1

Q ss_pred             CCcccchHHHHHHHHHH-cCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|++ .|++|++++|+........     ..+.....++.++.+|+.|.+++..+++..     ++|
T Consensus        10 TGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   84 (276)
T 1wma_A           10 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-----QQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   84 (276)
T ss_dssp             SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHH-----HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            79999999999999999 8999999999865422111     111111346889999999999888887643     799


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHhCC----CCccEEEEecceeecc-CC----------CCCCCC
Q 023110           75 VVYDINGREA--------------------DEVEPILDALP----NLEQFIYCSSAGVYLK-SD----------LLPHCE  119 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~~~----~~~~~i~~Ss~~v~~~-~~----------~~~~~e  119 (287)
                      +|||+||...                    .++.++++++.    ...++|++||...+.. ..          ..+++|
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e  164 (276)
T 1wma_A           85 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITE  164 (276)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCH
T ss_pred             EEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccch
Confidence            9999998641                    12334555543    2349999999877632 00          001111


Q ss_pred             CC-------------------CCCCCcch-hhhHHHHHHhh-------h----CCCcEEEEecCeeecCCCCCChhHHHH
Q 023110          120 TD-------------------TVDPKSRH-KGKLNTESVLE-------S----KGVNWTSLRPVYIYGPLNYNPVEEWFF  168 (287)
Q Consensus       120 ~~-------------------~~~~~~~~-~~k~~~E~~~~-------~----~~~~~~ilR~~~v~g~~~~~~~~~~~~  168 (287)
                      ++                   ...|...| .+|...|.+.+       .    .++++++++||.+.++....       
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~-------  237 (276)
T 1wma_A          165 EELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-------  237 (276)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-------
T ss_pred             hhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-------
Confidence            11                   11233445 99988887653       2    58999999999987763210       


Q ss_pred             HHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC
Q 023110          169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (287)
                                        ..+.+.+|+|++++.++..+
T Consensus       238 ------------------~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          238 ------------------KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             ------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred             ------------------cccCChhHhhhhHhhhhcCc
Confidence                              12578999999999999754

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.62  E-value=4.7e-15  Score=120.42  Aligned_cols=173  Identities=17%  Similarity=0.115  Sum_probs=115.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..     ..+......+.++.+|+.|.+++.++++..     ++|+
T Consensus        35 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~  109 (262)
T 3rkr_A           35 TGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVE-----REIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDV  109 (262)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999876532111     111112357889999999999998887642     6999


Q ss_pred             EEecCCCC---------------------cccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGRE---------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~---------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |||+||..                     +.++..++++    +.  +..++|++||...+..           ..+...
T Consensus       110 lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  178 (262)
T 3rkr_A          110 LVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNP-----------VADGAA  178 (262)
T ss_dssp             EEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCC-----------CTTCHH
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCC-----------CCCCch
Confidence            99999972                     1112233333    32  5679999999876422           122233


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      | .+|...+.+.+       ..++++.+++||.+..+....         ....         .....+++.+|+|++++
T Consensus       179 Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---------~~~~---------~~~~~~~~p~dvA~~v~  240 (262)
T 3rkr_A          179 YTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG---------LSAK---------KSALGAIEPDDIADVVA  240 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------------CCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccc---------cccc---------cccccCCCHHHHHHHHH
Confidence            4 89998887653       358999999999987663110         0000         11234578999999999


Q ss_pred             HHHcCCc
Q 023110          201 QVLGNEK  207 (287)
Q Consensus       201 ~~~~~~~  207 (287)
                      .++....
T Consensus       241 ~l~s~~~  247 (262)
T 3rkr_A          241 LLATQAD  247 (262)
T ss_dssp             HHHTCCT
T ss_pred             HHhcCcc
Confidence            9997654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.62  E-value=7.8e-16  Score=125.74  Aligned_cols=171  Identities=15%  Similarity=0.142  Sum_probs=119.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..     ..+.....++.++.+|+.|.+++.++++..     ++|+
T Consensus        37 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  111 (272)
T 1yb1_A           37 TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA-----AKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI  111 (272)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHH-----HHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence            799999999999999999999999999865422111     111111347899999999999888887642     7899


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      |||+||....                    +    ++.+++.+.  +..++|++||...+...           .+...|
T Consensus       112 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  180 (272)
T 1yb1_A          112 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV-----------PFLLAY  180 (272)
T ss_dssp             EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH-----------HHHHHH
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC-----------CCchhH
Confidence            9999986321                    1    222333333  56899999998775321           112234


Q ss_pred             -hhhHHHHHHhh----------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          130 -KGKLNTESVLE----------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       130 -~~k~~~E~~~~----------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                       .+|...|.+++          ..+++++++|||.+.++.....              .      .....+++.+|+|++
T Consensus       181 ~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~--------------~------~~~~~~~~~~dva~~  240 (272)
T 1yb1_A          181 CSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP--------------S------TSLGPTLEPEEVVNR  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT--------------H------HHHCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc--------------c------ccccCCCCHHHHHHH
Confidence             89998887653          2379999999999988742110              0      011246789999999


Q ss_pred             HHHHHcCCc
Q 023110          199 FVQVLGNEK  207 (287)
Q Consensus       199 ~~~~~~~~~  207 (287)
                      ++.++..+.
T Consensus       241 i~~~~~~~~  249 (272)
T 1yb1_A          241 LMHGILTEQ  249 (272)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHHcCC
Confidence            999998764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.62  E-value=1.7e-15  Score=121.90  Aligned_cols=190  Identities=13%  Similarity=0.098  Sum_probs=128.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+..        .+....+.++.+|+.|++++.++++..     ++|+
T Consensus        12 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A           12 TGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAA--------ASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH--------HHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999875532111        112357889999999999988887643     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||...                    .++..+.++    ++  + ..++|++||...+....           ....
T Consensus        84 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~  152 (247)
T 3rwb_A           84 LVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP-----------NMAA  152 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT-----------TCHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC-----------Cchh
Confidence            999999731                    122233333    43  3 57999999987653221           1223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcC-CCccCCCCCCceeeeeeHHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      | .+|...+.+.+       ..++++..++||.+.++......... ....... .++         ..+.+.+|+|+++
T Consensus       153 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~---------~r~~~pedva~~v  222 (247)
T 3rwb_A          153 YVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNE-AFGFVEMLQAM---------KGKGQPEHIADVV  222 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGG-GHHHHHHHSSS---------CSCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhH-HHHHHhccccc---------CCCcCHHHHHHHH
Confidence            4 89988776653       36899999999999876311000000 0011110 111         1245689999999


Q ss_pred             HHHHcCCc--cCCceEEecCCc
Q 023110          200 VQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      ..++....  -.|+.+++.++.
T Consensus       223 ~~L~s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          223 SFLASDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHhCccccCCCCCEEEECCCc
Confidence            99986543  378899998874

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.61  E-value=2.6e-15  Score=122.71  Aligned_cols=193  Identities=12%  Similarity=0.105  Sum_probs=128.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC----CccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~----~~d~v   76 (287)
                      |||+|.||++++++|+++|++|++++|+........     ..+......+.++.+|+.|.+++.++++..    ++|++
T Consensus        39 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~l  113 (275)
T 4imr_A           39 TGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQ-----QRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDIL  113 (275)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHH-----HHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCEE
Confidence            899999999999999999999999999876532111     111222457899999999998888777642    79999


Q ss_pred             EecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc-ch
Q 023110           77 YDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RH  129 (287)
Q Consensus        77 i~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~~  129 (287)
                      ||+||...                    .++..++++    +.  +..++|++||...+.           +..+.. |.
T Consensus       114 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~~~~~~Y~  182 (275)
T 4imr_A          114 VINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR-----------PKSVVTAYA  182 (275)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTBHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------CCCCchhhH
Confidence            99999631                    122333333    33  567999999987643           111222 34


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh--hHHHHHHHHcCC-CccCCCCCCceeeeeeHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      .+|...+.+.+       ..++++..++||.+..+......  ............ ++         .-+...+|+|+++
T Consensus       183 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v  253 (275)
T 4imr_A          183 ATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM---------GRAGRPEEMVGAA  253 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTT---------CSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCcc---------CCCcCHHHHHHHH
Confidence            99998887653       34899999999999776210000  011111111111 11         1245689999999


Q ss_pred             HHHHcCCc--cCCceEEecCC
Q 023110          200 VQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~  218 (287)
                      +.++....  ..|+.+++.++
T Consensus       254 ~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          254 LFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             HHHHSGGGTTCCSCEEEESSC
T ss_pred             HHHcCcccCCCCCCEEEeCCC
Confidence            99986532  36889998876

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.61  E-value=2.2e-14  Score=115.46  Aligned_cols=188  Identities=14%  Similarity=0.113  Sum_probs=121.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..        .+...++.++.+|+.|.+++.++++..     ++|+
T Consensus         6 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQELK--------DELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             TTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999999865421110        111246889999999999999888753     6999


Q ss_pred             EEecCCCCc---------------------ccH----HHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA---------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||...                     .++    +.++..+.  +..++|++||...+..           ..+...
T Consensus        78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~  146 (248)
T 3asu_A           78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP-----------YAGGNV  146 (248)
T ss_dssp             EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccC-----------CCCCch
Confidence            999998631                     012    22333332  5679999999876421           112233


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeee-cCCCCCChhHHHHHHHHcCCCc-cCCCCCCceeeeeeHHHHHHH
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~-g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      | .+|...+.+.+       ..++++..++||.+. .+.....+.     .  ..... ...    ....+++.+|+|++
T Consensus       147 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~-----~--~~~~~~~~~----~~~~~~~p~dvA~~  215 (248)
T 3asu_A          147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFK-----G--DDGKAEKTY----QNTVALTPEDVSEA  215 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC---------------------------------CCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhccc-----C--chHHHHHHH----hccCCCCHHHHHHH
Confidence            4 99999887663       358999999999998 453110000     0  00000 000    01124689999999


Q ss_pred             HHHHHcCCc-cCCceEEecCC
Q 023110          199 FVQVLGNEK-ASRQVFNISGE  218 (287)
Q Consensus       199 ~~~~~~~~~-~~~~~~~i~~~  218 (287)
                      ++.++..+. ..+..+.+...
T Consensus       216 v~~l~s~~~~~~g~~i~v~~~  236 (248)
T 3asu_A          216 VWWVSTLPAHVNINTLEMMPV  236 (248)
T ss_dssp             HHHHHHSCTTCCCCEEEECCT
T ss_pred             HHHHhcCCccceeeEEEEccc
Confidence            999987643 35566665543

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.61  E-value=4e-15  Score=122.39  Aligned_cols=206  Identities=17%  Similarity=0.163  Sum_probs=131.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccC----CCCChh-------hhhhhcCCeEEEEecCCChHHHHhhhh
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL----PGESDQ-------EFAEFSSKILHLKGDRKDYDFVKSSLS   69 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~~-------~~~~~~~~~~~i~~D~~d~~~~~~~~~   69 (287)
                      |||+|.||+++++.|+++|++|++++|+........    ......       .+......+.++.+|+.|.+++.++++
T Consensus        17 TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   96 (286)
T 3uve_A           17 TGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVD   96 (286)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHH
Confidence            799999999999999999999999999843211100    000001       111123578899999999999988876


Q ss_pred             cC-----CccEEEecCCCCc---------------------ccHHHHHHh----CC--C-CccEEEEecceeeccCCCCC
Q 023110           70 AK-----GFDVVYDINGREA---------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLP  116 (287)
Q Consensus        70 ~~-----~~d~vi~~a~~~~---------------------~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~  116 (287)
                      ..     ++|++||+||...                     .++..++++    +.  + ..++|++||...+...    
T Consensus        97 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  172 (286)
T 3uve_A           97 SGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAY----  172 (286)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----
T ss_pred             HHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCC----
Confidence            42     7999999999631                     112223333    22  2 4689999998764321    


Q ss_pred             CCCCCCCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcC---CC------ccC
Q 023110          117 HCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RP------IPI  179 (287)
Q Consensus       117 ~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~---~~------~~~  179 (287)
                             .....| .+|..++.+.+       ..++++..++||.+.++.......   .......   ..      ...
T Consensus       173 -------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  242 (286)
T 3uve_A          173 -------PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGT---FKMFRPDLENPGPDDMAPICQ  242 (286)
T ss_dssp             -------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHH---HHHHCTTSSSCCHHHHHHHHH
T ss_pred             -------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccch---hhhccccccccchhhHHHHHH
Confidence                   122234 89998887653       358999999999998875321100   0000000   00      000


Q ss_pred             CCCCCceeeeeeHHHHHHHHHHHHcCC--ccCCceEEecCCccc
Q 023110          180 PGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       180 ~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (287)
                      ...... ..+.+.+|+|++++.++...  .-.|+.+++.++..+
T Consensus       243 ~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          243 MFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             TTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            011111 35678999999999998653  237889999998654

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.61  E-value=1.1e-14  Score=120.49  Aligned_cols=209  Identities=12%  Similarity=0.164  Sum_probs=130.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCCh-------hhhhhhcCCeEEEEecCCChHHHHhhhhcC--
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--   71 (287)
                      |||+|.||+++++.|+++|++|++++|+.......+.....       ..+......+.++.+|+.|.+++.++++..  
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  113 (299)
T 3t7c_A           34 TGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVT  113 (299)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999999984321111110000       111222457899999999999988887642  


Q ss_pred             ---CccEEEecCCCCc---------------------ccHHHHHHh----CC---CCccEEEEecceeeccCCCCCCCCC
Q 023110           72 ---GFDVVYDINGREA---------------------DEVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCET  120 (287)
Q Consensus        72 ---~~d~vi~~a~~~~---------------------~~~~~ll~~----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~  120 (287)
                         ++|++||+||...                     .++..++++    +.   +..++|++||...+...        
T Consensus       114 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~--------  185 (299)
T 3t7c_A          114 QLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA--------  185 (299)
T ss_dssp             HHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC--------
T ss_pred             HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC--------
Confidence               7999999998631                     112223333    22   35689999998764321        


Q ss_pred             CCCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccC------CCCCCce
Q 023110          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI------PGSGIQV  186 (287)
Q Consensus       121 ~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  186 (287)
                         .....| .+|..++.+.+       ..++++..++||.+.++......................      ..... .
T Consensus       186 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p  261 (299)
T 3t7c_A          186 ---ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVL-P  261 (299)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSS-S
T ss_pred             ---CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhccc-C
Confidence               122234 89998887653       358999999999999875321100000000000000000      00000 1


Q ss_pred             eeeeeHHHHHHHHHHHHcCCc--cCCceEEecCCccc
Q 023110          187 TQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (287)
                      ..+...+|+|++++.++....  ..|+.+++.++..+
T Consensus       262 ~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          262 IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            246789999999999986543  36899999998654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.61  E-value=2.8e-15  Score=125.11  Aligned_cols=190  Identities=11%  Similarity=0.100  Sum_probs=115.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhc--CCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS--SKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||++++++|+++|++|++++|+.....+...     .+....  ..+.++.+|+.|.+++.++++..     ++
T Consensus        14 TGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (319)
T 3ioy_A           14 TGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALA-----TLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPV   88 (319)
T ss_dssp             ETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCE
T ss_pred             cCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999998765322111     111111  27889999999999988887642     68


Q ss_pred             cEEEecCCCC--------------------cccHHHHHHhCC------------CCccEEEEecceeeccCCCCCCCCCC
Q 023110           74 DVVYDINGRE--------------------ADEVEPILDALP------------NLEQFIYCSSAGVYLKSDLLPHCETD  121 (287)
Q Consensus        74 d~vi~~a~~~--------------------~~~~~~ll~~~~------------~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (287)
                      |+|||+||..                    +.++.++++++.            +..++|++||...+....        
T Consensus        89 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~--------  160 (319)
T 3ioy_A           89 SILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG--------  160 (319)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS--------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC--------
Confidence            9999999963                    122333444322            145799999987653211        


Q ss_pred             CCCCCcchhhhHHHHHHh-------hhCCCcEEEEecCeeecCCCCCC-hhHHHHHHHHc---CCCccCCCCCCceeeee
Q 023110          122 TVDPKSRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKA---GRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       122 ~~~~~~~~~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~i  190 (287)
                        ....|..+|..++.+.       ...++++++++||.|.++..... .....+.....   ...+....  ......+
T Consensus       161 --~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  236 (319)
T 3ioy_A          161 --SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLA--GVHEFGM  236 (319)
T ss_dssp             --SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------C--CGGGSSB
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHH--HhhhcCC
Confidence              1122448999655443       24589999999999988742110 00111100000   00000000  0111227


Q ss_pred             eHHHHHHHHHHHHcCCc
Q 023110          191 HVKDLARAFVQVLGNEK  207 (287)
Q Consensus       191 ~~~D~a~~~~~~~~~~~  207 (287)
                      +.+|+|+.++.+++++.
T Consensus       237 ~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          237 EPDVIGARVIEAMKANR  253 (319)
T ss_dssp             CHHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHHHHcCC
Confidence            89999999999998764

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.61  E-value=5.2e-14  Score=115.85  Aligned_cols=193  Identities=15%  Similarity=0.124  Sum_probs=128.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCC-ccccccCCCCChhhhh-hhcCCeEEEEecCCC----hHHHHhhhhcC---
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFA-EFSSKILHLKGDRKD----YDFVKSSLSAK---   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~-~~~~~~~~i~~D~~d----~~~~~~~~~~~---   71 (287)
                      |||+|+||++++++|+++|++|++++|+. ....+..     ..+. .....+.++.+|+.|    .+++.++++..   
T Consensus        29 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~  103 (288)
T 2x9g_A           29 TGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLA-----DELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRA  103 (288)
T ss_dssp             TTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHH
T ss_pred             eCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-----HHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHh
Confidence            89999999999999999999999999987 4321111     0111 113468899999999    88888777632   


Q ss_pred             --CccEEEecCCCCc----------c-----c-------------------HHHHHHhCC--C------CccEEEEecce
Q 023110           72 --GFDVVYDINGREA----------D-----E-------------------VEPILDALP--N------LEQFIYCSSAG  107 (287)
Q Consensus        72 --~~d~vi~~a~~~~----------~-----~-------------------~~~ll~~~~--~------~~~~i~~Ss~~  107 (287)
                        ++|++||+||...          .     .                   ++.++..+.  +      ..++|++||..
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~  183 (288)
T 2x9g_A          104 FGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAM  183 (288)
T ss_dssp             HSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTT
T ss_pred             cCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEeccc
Confidence              7999999998631          1     1                   112233333  2      56999999977


Q ss_pred             eeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccC
Q 023110          108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI  179 (287)
Q Consensus       108 v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~  179 (287)
                      .+..           ..+...| .+|..++.+.+       ..++++.+++||.++++. .. . ...........+.  
T Consensus       184 ~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~-~-~~~~~~~~~~~p~--  247 (288)
T 2x9g_A          184 VDQP-----------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AM-G-EEEKDKWRRKVPL--  247 (288)
T ss_dssp             TTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TS-C-HHHHHHHHHTCTT--
T ss_pred             ccCC-----------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-cc-C-hHHHHHHHhhCCC--
Confidence            6431           1122334 89988776653       358999999999999985 21 1 2122222222221  


Q ss_pred             CCCCCceeee-eeHHHHHHHHHHHHcCC--ccCCceEEecCCccc
Q 023110          180 PGSGIQVTQL-GHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       180 ~~~~~~~~~~-i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (287)
                       +      .+ .+.+|+|++++.++...  ...|+.+++.++..+
T Consensus       248 -~------r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  285 (288)
T 2x9g_A          248 -G------RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL  285 (288)
T ss_dssp             -T------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -C------CCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhh
Confidence             1      13 57899999999998653  236888999887543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.61  E-value=5.3e-15  Score=118.24  Aligned_cols=175  Identities=13%  Similarity=0.121  Sum_probs=120.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-------CCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-------~~~   73 (287)
                      |||+|+||++++++|+++|++|++++|+.....               ....++.+|+.|.+++.++++.       .++
T Consensus         9 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i   73 (236)
T 1ooe_A            9 YGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   73 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            799999999999999999999999999876521               2356788999999888877753       279


Q ss_pred             cEEEecCCCCc-----c----------------cHHHHHHh----CCCCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           74 DVVYDINGREA-----D----------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        74 d~vi~~a~~~~-----~----------------~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |+|||+||...     .                ++..++++    ++...++|++||...+..           ..+...
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  142 (236)
T 1ooe_A           74 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP-----------TPSMIG  142 (236)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHH
T ss_pred             CEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC-----------CCCcHH
Confidence            99999998531     1                12223333    222358999999876531           122233


Q ss_pred             h-hhhHHHHHHhh---------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~-~~k~~~E~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      | .+|...+.+.+         ..++++++++||.+.++.         ........         ....+++.+|+|++
T Consensus       143 Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~---------~~~~~~~~---------~~~~~~~~~dvA~~  204 (236)
T 1ooe_A          143 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM---------NRKWMPNA---------DHSSWTPLSFISEH  204 (236)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH---------HHHHSTTC---------CGGGCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc---------hhhcCCCc---------cccccCCHHHHHHH
Confidence            4 89998887653         335999999999987761         11111111         11235678999999


Q ss_pred             HHHHHcCCc---cCCceEEecCCc
Q 023110          199 FVQVLGNEK---ASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~~---~~~~~~~i~~~~  219 (287)
                      ++.++..+.   ..|+.+.+.++.
T Consensus       205 i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          205 LLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             HHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             HHHHHcCCCcccccccEEEEecCC
Confidence            997774332   357888887754

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.61  E-value=1.9e-14  Score=116.39  Aligned_cols=195  Identities=16%  Similarity=0.190  Sum_probs=128.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC---------
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---------   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~---------   71 (287)
                      |||+|.||++++++|+++|++|+++.++.........    ..+......+.++.+|+.|.+++..+++..         
T Consensus        13 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   88 (255)
T 3icc_A           13 TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETV----YEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTG   88 (255)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHH----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHS
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH----HHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhccccc
Confidence            7999999999999999999999997554433111110    111122356888999999998888776532         


Q ss_pred             --CccEEEecCCCCc--------------------ccHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           72 --GFDVVYDINGREA--------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        72 --~~d~vi~~a~~~~--------------------~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                        .+|++||+||...                    .++..+++++.    +..++|++||...+...           ..
T Consensus        89 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~  157 (255)
T 3icc_A           89 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL-----------PD  157 (255)
T ss_dssp             SSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCC-----------TT
T ss_pred             CCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCC-----------CC
Confidence              3999999998731                    12334555543    34589999998764321           12


Q ss_pred             Ccch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChh-HHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ...| .+|...+.+.+       ..++++..++||.+..+....... ...........+.         ..+.+++|+|
T Consensus       158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva  228 (255)
T 3icc_A          158 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAF---------NRLGEVEDIA  228 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTT---------SSCBCHHHHH
T ss_pred             cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCc---------CCCCCHHHHH
Confidence            2334 89998887653       358999999999998875322111 1112222222221         2356799999


Q ss_pred             HHHHHHHcCC--ccCCceEEecCCc
Q 023110          197 RAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      ++++.++...  ...|+.+++.++.
T Consensus       229 ~~~~~l~s~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          229 DTAAFLASPDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSST
T ss_pred             HHHHHHhCcccCCccCCEEEecCCe
Confidence            9999988643  2378899998875

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.61  E-value=6.4e-15  Score=119.56  Aligned_cols=191  Identities=18%  Similarity=0.141  Sum_probs=119.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.....+..     ..+......+.++.+|+.|.+++.++++..     ++|+
T Consensus        10 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   84 (264)
T 3tfo_A           10 TGASGGIGEGIARELGVAGAKILLGARRQARIEAIA-----TEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDV   84 (264)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999876532111     111112356888999999999988887643     7999


Q ss_pred             EEecCCCCcc--------------------cHH----HHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------EVE----PILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~----~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....                    ++.    .++..+.  +..++|++||...+...           .....|
T Consensus        85 lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-----------~~~~~Y  153 (264)
T 3tfo_A           85 LVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV-----------PTAAVY  153 (264)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----------TTCHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccC-----------CCChhH
Confidence            9999987421                    122    2333333  56799999998764321           122234


Q ss_pred             -hhhHHHHHHhh----h-CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE----S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       130 -~~k~~~E~~~~----~-~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                       .+|...+.+.+    + .++++..++||.+..+....     +    ...........  ....++..+|+|++++.++
T Consensus       154 ~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~-----~----~~~~~~~~~~~--~~~~~~~pedvA~~v~~l~  222 (264)
T 3tfo_A          154 CATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGT-----I----THEETMAAMDT--YRAIALQPADIARAVRQVI  222 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----------------------------------CCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccc-----c----cchhHHHHHHh--hhccCCCHHHHHHHHHHHh
Confidence             89998887653    2 38999999999987763211     0    00000000000  1112468999999999999


Q ss_pred             cCCcc--CCceEEecCC
Q 023110          204 GNEKA--SRQVFNISGE  218 (287)
Q Consensus       204 ~~~~~--~~~~~~i~~~  218 (287)
                      ..+..  .+++.....+
T Consensus       223 s~~~~~~~~~i~i~p~~  239 (264)
T 3tfo_A          223 EAPQSVDTTEITIRPTA  239 (264)
T ss_dssp             HSCTTEEEEEEEEEECC
T ss_pred             cCCccCccceEEEecCc
Confidence            87653  3344444443

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.61  E-value=1.9e-14  Score=117.71  Aligned_cols=194  Identities=11%  Similarity=0.048  Sum_probs=128.6

Q ss_pred             CCcc--cchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+  |+||+++++.|+++|++|++++|+... .+.+     ..+......+.++.+|+.|.+++.++++..     ++
T Consensus        12 TGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   85 (275)
T 2pd4_A           12 VGVANNKSIAYGIAQSCFNQGATLAFTYLNESL-EKRV-----RPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL   85 (275)
T ss_dssp             ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT-HHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH-HHHH-----HHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            7998  999999999999999999999998741 1111     111111134788999999999888887642     68


Q ss_pred             cEEEecCCCCcc------------------------cHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |++||+||....                        ++..+++++.    ...++|++||...+...           .+
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~  154 (275)
T 2pd4_A           86 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM-----------AH  154 (275)
T ss_dssp             EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----------TT
T ss_pred             CEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC-----------CC
Confidence            999999986421                        1333444433    23589999997654211           12


Q ss_pred             Ccch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ...| .+|...+.+.+       ..++++..++||.+.++..... .............++         ..+.+.+|+|
T Consensus       155 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~p~dva  225 (275)
T 2pd4_A          155 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------RKNVSLEEVG  225 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc---------CCCCCHHHHH
Confidence            2234 89998887653       3489999999999988742211 112222222222221         1245789999


Q ss_pred             HHHHHHHcCC--ccCCceEEecCCcc
Q 023110          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      ++++.++...  ...|+.+++.++..
T Consensus       226 ~~~~~l~s~~~~~~tG~~~~vdgg~~  251 (275)
T 2pd4_A          226 NAGMYLLSSLSSGVSGEVHFVDAGYH  251 (275)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCccccCCCCCEEEECCCcc
Confidence            9999998643  23678899988753

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.61  E-value=1.4e-14  Score=121.36  Aligned_cols=194  Identities=11%  Similarity=0.034  Sum_probs=130.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEE-cCCccccccCCCCChhhhh-hhcCCeEEEEecCCChH----------------
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYD----------------   62 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~D~~d~~----------------   62 (287)
                      |||+|+||+++++.|+++|++|++++ |+........     ..+. ....++.++.+|+.|.+                
T Consensus        52 TGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~  126 (328)
T 2qhx_A           52 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS-----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF  126 (328)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHH
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhhcCCeEEEEEeeCCCchhccccccccccccccH
Confidence            79999999999999999999999999 8765422111     0111 11346889999999988                


Q ss_pred             -HHHhhhhcC-----CccEEEecCCCCcc----------------------------------cHHHHHHh----CC--C
Q 023110           63 -FVKSSLSAK-----GFDVVYDINGREAD----------------------------------EVEPILDA----LP--N   96 (287)
Q Consensus        63 -~~~~~~~~~-----~~d~vi~~a~~~~~----------------------------------~~~~ll~~----~~--~   96 (287)
                       ++.++++..     ++|++||+||....                                  ++..++++    +.  +
T Consensus       127 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~  206 (328)
T 2qhx_A          127 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  206 (328)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence             888777643     79999999986310                                  01122232    22  3


Q ss_pred             ------CccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC
Q 023110           97 ------LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP  162 (287)
Q Consensus        97 ------~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~  162 (287)
                            ..++|++||...+..           ..+...| .+|..++.+.+       ..++++..|+||.+.++. .. 
T Consensus       207 ~~~~~~~g~IV~isS~~~~~~-----------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~-  273 (328)
T 2qhx_A          207 AKHRGTNYSIINMVDAMTNQP-----------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DM-  273 (328)
T ss_dssp             GGGSCSCEEEEEECCTTTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CS-
T ss_pred             CcCCCCCcEEEEECchhhccC-----------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cc-
Confidence                  579999999876431           1122234 89998887653       358999999999999885 22 


Q ss_pred             hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC--ccCCceEEecCCccc
Q 023110          163 VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (287)
                      . +..........++   +     ..+.+.+|+|++++.++...  ...|+.+++.++..+
T Consensus       274 ~-~~~~~~~~~~~p~---~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          274 P-PAVWEGHRSKVPL---Y-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             C-HHHHHHHHTTCTT---T-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             c-HHHHHHHHhhCCC---C-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            2 2233333322221   1     02567999999999998643  236889999988644

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.60  E-value=1e-14  Score=118.42  Aligned_cols=193  Identities=14%  Similarity=0.211  Sum_probs=123.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+..     ..+.....++.++.+|+.|++++.++++..     ++|+
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   87 (262)
T 1zem_A           13 TGAGGNIGLATALRLAEEGTAIALLDMNREALEKAE-----ASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF   87 (262)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865422111     111111346889999999999888777643     7999


Q ss_pred             EEecCCCC-c--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGRE-A--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~-~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||.. .                    .++..++++    +.  +..++|++||...+...           .....
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  156 (262)
T 1zem_A           88 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP-----------PNMAA  156 (262)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC-----------TTBHH
T ss_pred             EEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----------CCCch
Confidence            99999864 1                    112223333    22  45799999998765321           11223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC------------h--hHH-HHHHHHcCCCccCCCCCCc
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------------V--EEW-FFHRLKAGRPIPIPGSGIQ  185 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~------------~--~~~-~~~~~~~~~~~~~~~~~~~  185 (287)
                      | .+|...+.+.+       ..++++.+++||.+..+.....            .  ... .........++        
T Consensus       157 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------  228 (262)
T 1zem_A          157 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM--------  228 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT--------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCC--------
Confidence            4 88988776553       3589999999998866521000            0  000 11111111111        


Q ss_pred             eeeeeeHHHHHHHHHHHHcCCc--cCCceEEecCC
Q 023110          186 VTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~  218 (287)
                       ..+...+|+|++++.++....  ..|+.+.+.++
T Consensus       229 -~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          229 -RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             -SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             -CCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence             125678999999999986532  36778877654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.60  E-value=6.3e-14  Score=111.07  Aligned_cols=189  Identities=16%  Similarity=0.173  Sum_probs=131.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||++-||+++++.|.++|++|++.+|+.+......           ..++..+++|++|++++++++++. ++|++||+
T Consensus        17 TGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNN   85 (242)
T 4b79_A           17 TGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-----------HPRIRREELDITDSQRLQRLFEALPRLDVLVNN   85 (242)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-----------CTTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-----------cCCeEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999999999999999876633222           357889999999999999998865 69999999


Q ss_pred             CCCCcc------------------c----HHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHH
Q 023110           80 NGREAD------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTE  136 (287)
Q Consensus        80 a~~~~~------------------~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E  136 (287)
                      ||....                  +    ++..+..++ +..++|++||........          ....|..+|..+.
T Consensus        86 AGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~----------~~~~Y~asKaav~  155 (242)
T 4b79_A           86 AGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSA----------DRPAYSASKGAIV  155 (242)
T ss_dssp             CCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCS----------SCHHHHHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCC----------CCHHHHHHHHHHH
Confidence            997421                  1    222333343 447999999976532111          1112348998877


Q ss_pred             HHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCc-
Q 023110          137 SVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  207 (287)
Q Consensus       137 ~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-  207 (287)
                      .+.+       ..|+++..|.||.+..|.... .......+.+.+..++..         +...+|+|.+++.++.... 
T Consensus       156 ~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR---------~g~peeiA~~v~fLaSd~a~  226 (242)
T 4b79_A          156 QLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLAR---------WGEAPEVASAAAFLCGPGAS  226 (242)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCS---------CBCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhCchhc
Confidence            6553       468999999999998774211 111223344444444422         3448999999999885432 


Q ss_pred             -cCCceEEecCCc
Q 023110          208 -ASRQVFNISGEK  219 (287)
Q Consensus       208 -~~~~~~~i~~~~  219 (287)
                       -.|+.+.+.++.
T Consensus       227 ~iTG~~l~VDGG~  239 (242)
T 4b79_A          227 FVTGAVLAVDGGY  239 (242)
T ss_dssp             TCCSCEEEESTTG
T ss_pred             CccCceEEECccH
Confidence             378899988874

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.60  E-value=2.2e-14  Score=116.77  Aligned_cols=178  Identities=17%  Similarity=0.170  Sum_probs=123.0

Q ss_pred             CCcccchHHHHHHHHHHcC---CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC------
Q 023110            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~------   71 (287)
                      |||+|+||++++++|+++|   ++|++++|+..... .+     ..+.....++.++.+|+.|.+++.++++..      
T Consensus        27 TGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~-~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  100 (267)
T 1sny_A           27 TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-EL-----EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD  100 (267)
T ss_dssp             SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH-HH-----HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             ECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH-HH-----HHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCC
Confidence            7999999999999999999   99999999876521 11     111111357899999999999888887643      


Q ss_pred             -CccEEEecCCCCc---------------------ccHHHHHHhCC-----C------------CccEEEEecceeeccC
Q 023110           72 -GFDVVYDINGREA---------------------DEVEPILDALP-----N------------LEQFIYCSSAGVYLKS  112 (287)
Q Consensus        72 -~~d~vi~~a~~~~---------------------~~~~~ll~~~~-----~------------~~~~i~~Ss~~v~~~~  112 (287)
                       ++|+|||+||...                     .++..+++++.     .            ..++|++||...+...
T Consensus       101 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  180 (267)
T 1sny_A          101 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  180 (267)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccC
Confidence             6999999998643                     11223333321     1            4689999998775432


Q ss_pred             CCCCCCCCCCCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCC
Q 023110          113 DLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI  184 (287)
Q Consensus       113 ~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (287)
                      .        +..+...| .+|..+|.+.+       ..+++++++|||.+..+....                       
T Consensus       181 ~--------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------------  229 (267)
T 1sny_A          181 N--------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------------------  229 (267)
T ss_dssp             C--------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------------
T ss_pred             C--------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------------
Confidence            1        11123334 89999887663       258999999999987663110                       


Q ss_pred             ceeeeeeHHHHHHHHHHHHcCC--ccCCceEEecC
Q 023110          185 QVTQLGHVKDLARAFVQVLGNE--KASRQVFNISG  217 (287)
Q Consensus       185 ~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~  217 (287)
                        ...+..+|+|+.++.++...  ..+|..+.+.+
T Consensus       230 --~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g  262 (267)
T 1sny_A          230 --SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDG  262 (267)
T ss_dssp             --TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTS
T ss_pred             --CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCC
Confidence              02367899999999998753  23565555544

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.60  E-value=4e-15  Score=117.89  Aligned_cols=177  Identities=16%  Similarity=0.131  Sum_probs=124.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|+||++++++|.++|++|++++|+..                         +|+.|++++++++++. ++|++||+
T Consensus        12 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------------~D~~~~~~v~~~~~~~g~id~lv~n   66 (223)
T 3uce_A           12 LGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------------LDISDEKSVYHYFETIGAFDHLIVT   66 (223)
T ss_dssp             ETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------------CCTTCHHHHHHHHHHHCSEEEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------------cCCCCHHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999988732                         7899999998888753 69999999


Q ss_pred             CCCCc---------------------ccHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhH
Q 023110           80 NGREA---------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKL  133 (287)
Q Consensus        80 a~~~~---------------------~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~  133 (287)
                      ||...                     .++..+++++.    ...++|++||...+...           .+...| .+|.
T Consensus        67 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~~~~Y~asK~  135 (223)
T 3uce_A           67 AGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVV-----------ANTYVKAAINA  135 (223)
T ss_dssp             CCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCC-----------TTCHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCC-----------CCchHHHHHHH
Confidence            99641                     12333444432    23589999998765321           122334 8999


Q ss_pred             HHHHHhh----hC-CCcEEEEecCeeecCCCCCCh---hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcC
Q 023110          134 NTESVLE----SK-GVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       134 ~~E~~~~----~~-~~~~~ilR~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (287)
                      ..+.+.+    +. .+++..++||.+.++......   ...+........+.         ..+.+++|+|++++.+++.
T Consensus       136 a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dvA~~~~~l~~~  206 (223)
T 3uce_A          136 AIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV---------GKVGEASDIAMAYLFAIQN  206 (223)
T ss_dssp             HHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT---------CSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC---------CCccCHHHHHHHHHHHccC
Confidence            8887663    22 389999999999887422111   11122222222221         2456799999999999987


Q ss_pred             CccCCceEEecCCcccC
Q 023110          206 EKASRQVFNISGEKYVT  222 (287)
Q Consensus       206 ~~~~~~~~~i~~~~~~s  222 (287)
                      ....|+.+++.++..++
T Consensus       207 ~~~tG~~i~vdgG~~~s  223 (223)
T 3uce_A          207 SYMTGTVIDVDGGALLG  223 (223)
T ss_dssp             TTCCSCEEEESTTGGGC
T ss_pred             CCCCCcEEEecCCeecC
Confidence            66689999999987543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.60  E-value=1.1e-14  Score=116.32  Aligned_cols=187  Identities=17%  Similarity=0.083  Sum_probs=123.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+...    .........+.++.+|+.|++++.++++..     ++|+
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (235)
T 3l77_A            8 TGASRGIGEAIARALARDGYALALGARSVDRLEKIAH----ELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDV   83 (235)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998765321111    000112357899999999999999888743     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcchh
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  130 (287)
                      +||+||...                    .++..++++    ++ +..++|++||...+...          +....|..
T Consensus        84 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~----------~~~~~Y~~  153 (235)
T 3l77_A           84 VVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI----------PYGGGYVS  153 (235)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC----------TTCHHHHH
T ss_pred             EEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC----------CCcchHHH
Confidence            999998731                    123334443    33 34567777765543211          11122448


Q ss_pred             hhHHHHHHhh-----hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcC
Q 023110          131 GKLNTESVLE-----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       131 ~k~~~E~~~~-----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (287)
                      +|..++.+.+     ..++++..++||.+..+.....          .       .. .....+++.+|+|++++.++..
T Consensus       154 sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~----------~-------~~-~~~~~~~~p~dva~~v~~l~~~  215 (235)
T 3l77_A          154 TKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSK----------P-------GK-PKEKGYLKPDEIAEAVRCLLKL  215 (235)
T ss_dssp             HHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCC----------S-------CC-CGGGTCBCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccccc----------C-------Cc-ccccCCCCHHHHHHHHHHHHcC
Confidence            9998887764     3589999999999876631110          0       00 1112467899999999999987


Q ss_pred             Ccc--CCceEEecCCc
Q 023110          206 EKA--SRQVFNISGEK  219 (287)
Q Consensus       206 ~~~--~~~~~~i~~~~  219 (287)
                      +..  .++.....+++
T Consensus       216 ~~~~~~~~~~~~~~~~  231 (235)
T 3l77_A          216 PKDVRVEELMLRSVYQ  231 (235)
T ss_dssp             CTTCCCCEEEECCTTS
T ss_pred             CCCCccceEEEeeccc
Confidence            653  45555555544

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.59  E-value=1.6e-14  Score=115.75  Aligned_cols=175  Identities=11%  Similarity=0.048  Sum_probs=121.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-------CCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-------~~~   73 (287)
                      |||+|+||++++++|+++|++|++++|+.....               ....++.+|+.|++++.++++.       .++
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~i   77 (241)
T 1dhr_A           13 YGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   77 (241)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            799999999999999999999999999875421               2356788999999888887764       379


Q ss_pred             cEEEecCCCCc-----c----------------cHHHHHHhC----CCCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           74 DVVYDINGREA-----D----------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        74 d~vi~~a~~~~-----~----------------~~~~ll~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |++||+||...     .                ++..+++++    +...++|++||...+...           .+...
T Consensus        78 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  146 (241)
T 1dhr_A           78 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT-----------PGMIG  146 (241)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----------TTBHH
T ss_pred             CEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC-----------CCchH
Confidence            99999998631     1                122233332    223589999998765321           12223


Q ss_pred             h-hhhHHHHHHhh---------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~-~~k~~~E~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      | .+|...+.+.+         ..++++..++||.+-.+     +    ........         ....+++.+|+|++
T Consensus       147 Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~-----~----~~~~~~~~---------~~~~~~~~~~vA~~  208 (241)
T 1dhr_A          147 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP-----M----NRKSMPEA---------DFSSWTPLEFLVET  208 (241)
T ss_dssp             HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH-----H----HHHHSTTS---------CGGGSEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc-----c----ccccCcch---------hhccCCCHHHHHHH
Confidence            4 89998887653         34699999999988665     1    11111111         11235778999999


Q ss_pred             HHHHHcCCc--cCCceEEecCCc
Q 023110          199 FVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++.++....  ..|+.+.+.++.
T Consensus       209 v~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          209 FHDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             HHHHHTTTTCCCTTCEEEEEEET
T ss_pred             HHHHhcCCCcCccceEEEEeCCC
Confidence            999986543  357888887654

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.59  E-value=1.2e-14  Score=117.24  Aligned_cols=190  Identities=13%  Similarity=0.105  Sum_probs=124.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhh-hhcCCeEEEEecC--CChHHHHhhhhcC-----C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDR--KDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~D~--~d~~~~~~~~~~~-----~   72 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+...     .+. .....+.++.+|+  .|.+++.++++..     +
T Consensus        18 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~   92 (252)
T 3f1l_A           18 TGASDGIGREAAMTYARYGATVILLGRNEEKLRQVAS-----HINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPR   92 (252)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999998765321111     111 1123788999999  8888887777642     7


Q ss_pred             ccEEEecCCCCc---------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           73 FDVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        73 ~d~vi~~a~~~~---------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      +|++||+||...                     .++..++++    ++  +..++|++||...+...           .+
T Consensus        93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~  161 (252)
T 3f1l_A           93 LDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR-----------AN  161 (252)
T ss_dssp             CSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCC-----------TT
T ss_pred             CCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCC-----------CC
Confidence            999999998621                     112233333    32  56799999997754211           12


Q ss_pred             Ccch-hhhHHHHHHhh----h--CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          126 KSRH-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~----~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      ...| .+|...+.+.+    +  ..+++..+.||.+..+     +    .........         ...+.+.+|+|.+
T Consensus       162 ~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~-----~----~~~~~~~~~---------~~~~~~p~dva~~  223 (252)
T 3f1l_A          162 WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA-----M----RASAFPTED---------PQKLKTPADIMPL  223 (252)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH-----H----HHHHCTTCC---------GGGSBCTGGGHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc-----h----hhhhCCccc---------hhccCCHHHHHHH
Confidence            2234 99998887653    2  2388899999987654     1    111111111         1235678999999


Q ss_pred             HHHHHcCCc--cCCceEEecCCcccCHH
Q 023110          199 FVQVLGNEK--ASRQVFNISGEKYVTFD  224 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~~~s~~  224 (287)
                      ++.++....  ..|+.+++.++...++.
T Consensus       224 ~~~L~s~~~~~itG~~i~vdgG~~~~~~  251 (252)
T 3f1l_A          224 YLWLMGDDSRRKTGMTFDAQPGRKPGIS  251 (252)
T ss_dssp             HHHHHSGGGTTCCSCEEESSCC------
T ss_pred             HHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence            999986543  37889999998876654

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.58  E-value=9.5e-15  Score=118.79  Aligned_cols=197  Identities=16%  Similarity=0.153  Sum_probs=128.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh-h-cCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~-~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+|.||++++++|+++|++|++++|+.....+...     .+.. . ...+.++.+|+.|.+++.++++..     ++
T Consensus        14 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   88 (265)
T 3lf2_A           14 TGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAES-----ALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCA   88 (265)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999998765321111     1111 1 124889999999999888887643     78


Q ss_pred             cEEEecCCCCcc--------------------cHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           74 DVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      |++||+||....                    ++..++++    +.  +..++|++||...+..           .....
T Consensus        89 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~  157 (265)
T 3lf2_A           89 SILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQP-----------EPHMV  157 (265)
T ss_dssp             SEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSC-----------CTTBH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCC-----------CCCch
Confidence            999999997311                    12233333    33  4578999999776421           11223


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC---------hhHHHHHHHHcCCCccCCCCCCceeeee
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP---------VEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                      .| .+|...+.+.+       ..++++..++||.+.+|.....         ....+..........+.       ..+.
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~r~~  230 (265)
T 3lf2_A          158 ATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPL-------GRLG  230 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTT-------CSCB
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCc-------CCCc
Confidence            34 89998887653       3589999999999987621000         00111111111111111       2356


Q ss_pred             eHHHHHHHHHHHHcCC--ccCCceEEecCCcc
Q 023110          191 HVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       191 ~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      ..+|+|++++.++...  ...|+.+++.++..
T Consensus       231 ~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          231 KPIEAARAILFLASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred             CHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence            7999999999998643  23788999988753

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.58  E-value=5.6e-14  Score=114.55  Aligned_cols=191  Identities=14%  Similarity=0.096  Sum_probs=120.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++++++|+++|++|++++|+.....+...     .+.. ..++.++.+|+.|.+++.++++..     ++|+
T Consensus        27 TGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           27 TGATSGFGEACARRFAEAGWSLVLTGRREERLQALAG-----ELSA-KTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             SSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHTT-TSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----Hhhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654221110     0000 136889999999999999988743     5799


Q ss_pred             EEecCCCCcc---------------------c----HHHHHHhCC--CCc-cEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           76 VYDINGREAD---------------------E----VEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~ll~~~~--~~~-~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      +||+||....                     +    ++.++..+.  +.. ++|++||...+..           .....
T Consensus       101 lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~-----------~~~~~  169 (272)
T 2nwq_A          101 LINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP-----------YPGSH  169 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC-----------CTTCH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC-----------CCCCc
Confidence            9999986321                     1    223344443  556 9999999876421           11222


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      .| .+|...+.+.+       ..++++.+++||.+.++.....+.    ..  .........    ...++..+|+|+++
T Consensus       170 ~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~----~~--~~~~~~~~~----~~~~~~pedvA~~v  239 (272)
T 2nwq_A          170 VYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFG----GD--QARYDKTYA----GAHPIQPEDIAETI  239 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------------------------------CCCCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccc----cc--hHHHHHhhc----cCCCCCHHHHHHHH
Confidence            34 99999887763       357999999999998773211000    00  000000000    01246899999999


Q ss_pred             HHHHcCCcc-CCceEEecCC
Q 023110          200 VQVLGNEKA-SRQVFNISGE  218 (287)
Q Consensus       200 ~~~~~~~~~-~~~~~~i~~~  218 (287)
                      +.++..+.. .+..+.+.++
T Consensus       240 ~~l~s~~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          240 FWIMNQPAHLNINSLEIMPV  259 (272)
T ss_dssp             HHHHTSCTTEEEEEEEEEET
T ss_pred             HHHhCCCccCccceEEEeec
Confidence            999976432 4555555543

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.58  E-value=2.3e-14  Score=117.79  Aligned_cols=191  Identities=13%  Similarity=0.101  Sum_probs=128.5

Q ss_pred             CCcccchHHHHHHHHHHcCC---eEEEEEcCCccccccCCCCChhhhhhh--cCCeEEEEecCCChHHHHhhhhcC----
Q 023110            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK----   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~~----   71 (287)
                      |||+|.||++++++|+++|+   +|++.+|+.....+...     .+...  ...+.++.+|+.|.+++.++++..    
T Consensus        39 TGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  113 (287)
T 3rku_A           39 TGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKK-----TIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEF  113 (287)
T ss_dssp             ESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-----HHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGG
T ss_pred             ecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHH-----HHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            79999999999999999987   99999998765321110     11111  246889999999999999988754    


Q ss_pred             -CccEEEecCCCCc---------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCC
Q 023110           72 -GFDVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        72 -~~d~vi~~a~~~~---------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (287)
                       ++|++||+||...                     .++..++++    ++  +..++|++||...+..           .
T Consensus       114 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-----------~  182 (287)
T 3rku_A          114 KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDA-----------Y  182 (287)
T ss_dssp             CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------C
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCC-----------C
Confidence             6999999999632                     122333333    33  5679999999776421           1


Q ss_pred             CCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCC---CCChhHHHHHHHHcCCCccCCCCCCceeeeeeH
Q 023110          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN---YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (287)
Q Consensus       124 ~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (287)
                      .....| .+|..++.+.+       ..++++..++||.+..+..   ...... ........            ...+..
T Consensus       183 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~------------~~p~~p  249 (287)
T 3rku_A          183 PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEE-QAKNVYKD------------TTPLMA  249 (287)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHH-HHHHHHTT------------SCCEEH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHH-HHHHhhcc------------cCCCCH
Confidence            122334 99998887653       3689999999999987621   000000 01111111            113479


Q ss_pred             HHHHHHHHHHHcCCcc--CCceEEecCCcc
Q 023110          193 KDLARAFVQVLGNEKA--SRQVFNISGEKY  220 (287)
Q Consensus       193 ~D~a~~~~~~~~~~~~--~~~~~~i~~~~~  220 (287)
                      +|+|++++.++..+..  .++.+.+.+++.
T Consensus       250 edvA~~v~~l~s~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          250 DDVADLIVYATSRKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             HHHHHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred             HHHHHHHHHHhCCCCCeEecceEEeeCCCC
Confidence            9999999999976543  577888888765

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.58  E-value=1.9e-14  Score=116.27  Aligned_cols=193  Identities=13%  Similarity=0.124  Sum_probs=128.0

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+|.||++++++|+++|  +.|++.+|+.....+.        ..+...++.++.+|+.|.+++.++++..     ++
T Consensus         8 TGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            8 TGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKL--------KEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHH--------HHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHH--------HHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence            8999999999999999985  7898888886542211        1112357899999999999998888643     79


Q ss_pred             cEEEecCCCCc---------------------ccHHHHHHhC----C-CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           74 DVVYDINGREA---------------------DEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~---------------------~~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      |++||+||...                     .++..+++++    + ...++|++||...+..           ..+..
T Consensus        80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~-----------~~~~~  148 (254)
T 3kzv_A           80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMY-----------FSSWG  148 (254)
T ss_dssp             CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCS-----------SCCSH
T ss_pred             cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccC-----------CCCcc
Confidence            99999998731                     1223333332    3 2379999999876432           12223


Q ss_pred             ch-hhhHHHHHHhh----h-CCCcEEEEecCeeecCCCCCC--------hhHHHHHHHHcCCCccCCCCCCceeeeeeHH
Q 023110          128 RH-KGKLNTESVLE----S-KGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       128 ~~-~~k~~~E~~~~----~-~~~~~~ilR~~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                      .| .+|...+.+.+    + .++++..++||.+.++.....        .............+         ...+.+.+
T Consensus       149 ~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~r~~~p~  219 (254)
T 3kzv_A          149 AYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE---------NNQLLDSS  219 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT---------TC----CH
T ss_pred             hHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh---------cCCcCCcc
Confidence            44 99998887663    2 489999999999988752211        01122222222111         12467789


Q ss_pred             HHHHHHHHHHcCCc---cCCceEEecCCccc
Q 023110          194 DLARAFVQVLGNEK---ASRQVFNISGEKYV  221 (287)
Q Consensus       194 D~a~~~~~~~~~~~---~~~~~~~i~~~~~~  221 (287)
                      |+|++++.++....   ..|+.+++.+++..
T Consensus       220 dva~~v~~L~s~~~~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          220 VPATVYAKLALHGIPDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             HHHHHHHHHHHHCCCGGGTTCEEETTCGGGG
T ss_pred             cHHHHHHHHHhhcccCCCCccEEEecCcccc
Confidence            99999999986542   47889998887643

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.58  E-value=1.9e-14  Score=115.80  Aligned_cols=181  Identities=18%  Similarity=0.142  Sum_probs=118.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+........     ..+.....++.++.+|+.|++++.++++..     ++|+
T Consensus        13 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   87 (247)
T 2jah_A           13 TGASSGIGEATARALAAEGAAVAIAARRVEKLRALG-----DELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDI   87 (247)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     111111346889999999999888887642     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                    .++..++++    +.  + .++|++||...+..           ..+...|
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-----------~~~~~~Y  155 (247)
T 2jah_A           88 LVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN-----------VRNAAVY  155 (247)
T ss_dssp             EEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC-----------CTTCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC-----------CCCCcHH
Confidence            999998631                    122233333    22  4 79999999776421           1122234


Q ss_pred             -hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                       .+|...+.+.+       ..++++.+++||.+.++......... .......  .+  +    .+.+++.+|+|++++.
T Consensus       156 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~--~~--~----~~~~~~pedvA~~v~~  226 (247)
T 2jah_A          156 QATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTA-TKEMYEQ--RI--S----QIRKLQAQDIAEAVRY  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHH-HHHHHHH--HT--T----TSCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchh-hHHHHHh--cc--c----ccCCCCHHHHHHHHHH
Confidence             88988776552       45899999999999877421100011 1111110  10  1    1125789999999999


Q ss_pred             HHcCCc
Q 023110          202 VLGNEK  207 (287)
Q Consensus       202 ~~~~~~  207 (287)
                      ++..+.
T Consensus       227 l~s~~~  232 (247)
T 2jah_A          227 AVTAPH  232 (247)
T ss_dssp             HHHSCT
T ss_pred             HhCCCc
Confidence            987643

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.58  E-value=9.7e-16  Score=124.41  Aligned_cols=202  Identities=11%  Similarity=0.094  Sum_probs=124.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|...... .+... ...+.....++.++.+|+.|.+++.++++..     ++|+
T Consensus        17 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~-~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   94 (262)
T 3ksu_A           17 AGGIKNLGALTAKTFALESVNLVLHYHQAKDSD-TANKL-KDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDI   94 (262)
T ss_dssp             ETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHH-HHHHH-HHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecCccCHH-HHHHH-HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999988643311 00000 0111111356889999999999998888643     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhC----CCCccEEEEecceeeccCCCCCCCCCCCCCCCcchhh
Q 023110           76 VYDINGREA--------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  131 (287)
                      +||+||...                    .++..+++++    ++..++|++||...+.....          ...|..+
T Consensus        95 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~----------~~~Y~as  164 (262)
T 3ksu_A           95 AINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF----------YSTYAGN  164 (262)
T ss_dssp             EEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCC----------CCC----
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCC----------CchhHHH
Confidence            999999631                    1233344443    24468999999876543221          1124488


Q ss_pred             hHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      |...+.+.+       ..++++..+.||.+..+........         ..............+.+.+|+|++++.++.
T Consensus       165 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---------~~~~~~~~~~~~~r~~~pedvA~~v~~L~s  235 (262)
T 3ksu_A          165 KAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETK---------ESTAFHKSQAMGNQLTKIEDIAPIIKFLTT  235 (262)
T ss_dssp             -CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC---------------------CCCCSCCGGGTHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCch---------HHHHHHHhcCcccCCCCHHHHHHHHHHHcC
Confidence            888776653       3589999999998866521000000         000000111112245678999999999987


Q ss_pred             CC-ccCCceEEecCCcccCH
Q 023110          205 NE-KASRQVFNISGEKYVTF  223 (287)
Q Consensus       205 ~~-~~~~~~~~i~~~~~~s~  223 (287)
                      .. ...|+.+++.++.....
T Consensus       236 ~~~~itG~~i~vdGg~~~~~  255 (262)
T 3ksu_A          236 DGWWINGQTIFANGGYTTRE  255 (262)
T ss_dssp             TTTTCCSCEEEESTTCCCC-
T ss_pred             CCCCccCCEEEECCCccCCC
Confidence            52 23688999999865443

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.57  E-value=1.7e-14  Score=114.83  Aligned_cols=170  Identities=14%  Similarity=0.075  Sum_probs=113.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC--CccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--~~d~vi~   78 (287)
                      |||+|.||++++++|+++|++|++++|+.....+...        +....+.++.+|+.+.+++.++++..  ..|++||
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            7 TGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTN--------CLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence            7999999999999999999999999998765321111        11357889999999999999998843  2499999


Q ss_pred             cCCCCc--------------------ccHHHHHH----hCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhh
Q 023110           79 INGREA--------------------DEVEPILD----ALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (287)
Q Consensus        79 ~a~~~~--------------------~~~~~ll~----~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (287)
                      +||...                    .++..+++    .+. ...++|++||...+..           ..+...| .+|
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y~asK  147 (230)
T 3guy_A           79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP-----------KAQESTYCAVK  147 (230)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC-----------CTTCHHHHHHH
T ss_pred             eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC-----------CCCCchhHHHH
Confidence            998631                    11223333    333 2349999999876532           1122334 999


Q ss_pred             HHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcC
Q 023110          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (287)
                      ...+.+.+       ..++++..++||.+..+...         ....  ..       ....+++.+|+|++++.++..
T Consensus       148 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~---------~~~~--~~-------~~~~~~~~~dvA~~i~~l~~~  209 (230)
T 3guy_A          148 WAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWE---------TSGK--SL-------DTSSFMSAEDAALMIHGALAN  209 (230)
T ss_dssp             HHHHHHHHHHHHHTTTSSCEEEEEEECCC----------------------------------CCCHHHHHHHHHHHCCE
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHH---------hcCC--CC-------CcccCCCHHHHHHHHHHHHhC
Confidence            98887653       34899999999998776211         1000  11       123567899999999999875


Q ss_pred             Cc
Q 023110          206 EK  207 (287)
Q Consensus       206 ~~  207 (287)
                      +.
T Consensus       210 ~~  211 (230)
T 3guy_A          210 IG  211 (230)
T ss_dssp             ET
T ss_pred             cC
Confidence            44

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.57  E-value=4.4e-14  Score=112.68  Aligned_cols=186  Identities=17%  Similarity=0.166  Sum_probs=127.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|.++|++|++.+|+.....+..+         ...++.++++|+.|+++++++++..     ++|+
T Consensus         8 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~---------~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            8 TGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK---------ERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT---------TCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---------hcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765322111         1357889999999999888877642     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcchh
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  130 (287)
                      +||+||....                    +    ++.++..+. +..++|++||...+...+          ....|..
T Consensus        79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~----------~~~~Y~a  148 (247)
T 3ged_A           79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEP----------DSEAYAS  148 (247)
T ss_dssp             EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCT----------TCHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCC----------CCHHHHH
Confidence            9999987421                    1    223333343 447999999977532111          1122348


Q ss_pred             hhHHHHHHhh------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          131 GKLNTESVLE------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       131 ~k~~~E~~~~------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      +|..+..+.+      ..++++..|.||.+-.+....     +.....+..++..         +...+|+|.+++.++.
T Consensus       149 sKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~-----~~~~~~~~~Pl~R---------~g~pediA~~v~fL~s  214 (247)
T 3ged_A          149 AKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE-----FTQEDCAAIPAGK---------VGTPKDISNMVLFLCQ  214 (247)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC--------CCHHHHHTSTTSS---------CBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH-----HHHHHHhcCCCCC---------CcCHHHHHHHHHHHHh
Confidence            8888776543      247999999999987664211     1222223223221         3458999999999997


Q ss_pred             CCccCCceEEecCCc
Q 023110          205 NEKASRQVFNISGEK  219 (287)
Q Consensus       205 ~~~~~~~~~~i~~~~  219 (287)
                      ..--.|+.+.+.++-
T Consensus       215 ~~~iTG~~i~VDGG~  229 (247)
T 3ged_A          215 QDFITGETIIVDGGM  229 (247)
T ss_dssp             CSSCCSCEEEESTTG
T ss_pred             CCCCCCCeEEECcCH
Confidence            655578899998874

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.57  E-value=3.4e-14  Score=113.37  Aligned_cols=169  Identities=17%  Similarity=0.153  Sum_probs=115.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.....+..        .+...++.++.+|+.|.+++.++++..     ++|+
T Consensus         9 TGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            9 TGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQE--------LLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999999999999876532111        111236889999999999988887643     6899


Q ss_pred             EEecCCCCc--------------------ccH----HHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-
Q 023110           76 VYDINGREA--------------------DEV----EPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~----~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (287)
                      +||+||...                    .++    +.++..+. ...++|++||...+...           .....| 
T Consensus        81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y~  149 (235)
T 3l6e_A           81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGK-----------ANESLYC  149 (235)
T ss_dssp             EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSC-----------SSHHHHH
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCC-----------CCCcHHH
Confidence            999999731                    112    22333333 33499999997764321           112234 


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+.+       ..++++..++||.+..+....     .     ..  .       ....+++.+|+|++++.+
T Consensus       150 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-----~-----~~--~-------~~~~~~~pedvA~~v~~l  210 (235)
T 3l6e_A          150 ASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDN-----T-----DH--V-------DPSGFMTPEDAAAYMLDA  210 (235)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC------------------------------CBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhc-----c-----CC--C-------CCcCCCCHHHHHHHHHHH
Confidence            99998887653       357999999999997763110     0     00  0       012467899999999999


Q ss_pred             HcCCc
Q 023110          203 LGNEK  207 (287)
Q Consensus       203 ~~~~~  207 (287)
                      +..+.
T Consensus       211 ~~~~~  215 (235)
T 3l6e_A          211 LEARS  215 (235)
T ss_dssp             TCCCS
T ss_pred             HhCCC
Confidence            97654

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.56  E-value=3.8e-15  Score=119.78  Aligned_cols=180  Identities=16%  Similarity=0.155  Sum_probs=107.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHH---HhhhhcC-CccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV---KSSLSAK-GFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~---~~~~~~~-~~d~v   76 (287)
                      |||+|+||++++++|.+ |+.|++++|+.........          ..++.++.+|+.+.+..   .+.++.. ++|++
T Consensus        11 TGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   79 (245)
T 3e9n_A           11 TGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----------IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTL   79 (245)
T ss_dssp             ESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----------STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEE
T ss_pred             EcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----------hcCCcceecccchHHHHHHHHHHHHhcCCCCEE
Confidence            79999999999999988 9999999998665321111          24688999999876442   2223222 79999


Q ss_pred             EecCCCCcc--------------------c----HHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-h
Q 023110           77 YDINGREAD--------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        77 i~~a~~~~~--------------------~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (287)
                      ||+||....                    +    ++.++..++ ...++|++||...+....           +...| .
T Consensus        80 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y~a  148 (245)
T 3e9n_A           80 VHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHP-----------GNTIYAA  148 (245)
T ss_dssp             EECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC---------------------CHHHHH
T ss_pred             EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCC-----------CchHHHH
Confidence            999987321                    1    222333333 337899999988764321           22334 9


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      +|...+.+.+       ..++++..++||.+.++....     +....  +..       .....+++.+|+|++++.++
T Consensus       149 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~~~~--~~~-------~~~~~~~~p~dvA~~i~~l~  214 (245)
T 3e9n_A          149 SKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG-----LMDSQ--GTN-------FRPEIYIEPKEIANAIRFVI  214 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------CCGGGSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh-----hhhhh--hcc-------cccccCCCHHHHHHHHHHHH
Confidence            9998887663       358999999999998873211     11010  000       11234678999999999999


Q ss_pred             cCCccCCceEEecC
Q 023110          204 GNEKASRQVFNISG  217 (287)
Q Consensus       204 ~~~~~~~~~~~i~~  217 (287)
                      +.+. .+.++++.-
T Consensus       215 ~~~~-~~~~~~i~~  227 (245)
T 3e9n_A          215 DAGE-TTQITNVDV  227 (245)
T ss_dssp             TSCT-TEEEEEEEE
T ss_pred             cCCC-ccceeeeEE
Confidence            8776 456777653

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.55  E-value=7.6e-14  Score=113.59  Aligned_cols=197  Identities=15%  Similarity=0.109  Sum_probs=131.1

Q ss_pred             CCcc--cchHHHHHHHHHHcCCeEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----C
Q 023110            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGat--G~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~   72 (287)
                      |||+  |.||++++++|+++|++|++++|+.... .+...    ........++.++.+|+.|.+++.++++..     +
T Consensus        26 TGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  101 (267)
T 3gdg_A           26 TGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVK----ELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQ  101 (267)
T ss_dssp             TTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHH----HHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSC
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHH----HHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            7999  8999999999999999999999887553 11111    011112457889999999999988887743     7


Q ss_pred             ccEEEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCC
Q 023110           73 FDVVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        73 ~d~vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (287)
                      +|++||+||...                    .++.++++++    .  +..++|++||...+...         ...+.
T Consensus       102 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~~~~  172 (267)
T 3gdg_A          102 IDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN---------FPQEQ  172 (267)
T ss_dssp             CSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---------SSSCC
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC---------CCCCC
Confidence            899999998732                    1233344433    3  56799999997653211         11122


Q ss_pred             cch-hhhHHHHHHhh----h--CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          127 SRH-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~----~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      ..| .+|...+.+.+    +  ..+++..+.||.+..+... ..............+         ...+.+.+|+|+++
T Consensus       173 ~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~~---------~~r~~~~~dva~~~  242 (267)
T 3gdg_A          173 TSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSD-FVPKETQQLWHSMIP---------MGRDGLAKELKGAY  242 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGG-GSCHHHHHHHHTTST---------TSSCEETHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhh-hCCHHHHHHHHhcCC---------CCCCcCHHHHHhHh
Confidence            334 99998887663    2  2378999999999876421 111222222222221         12466799999999


Q ss_pred             HHHHcCC--ccCCceEEecCCcc
Q 023110          200 VQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      +.++...  ...|+.+++.++..
T Consensus       243 ~~l~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          243 VYFASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             HHHHSTTCTTCCSCEEEESTTGG
T ss_pred             heeecCccccccCCEEEECCcee
Confidence            9998653  23688999998764

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.55  E-value=8.3e-14  Score=114.76  Aligned_cols=194  Identities=11%  Similarity=0.046  Sum_probs=128.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEE-cCCccccccCCCCChhhhh-hhcCCeEEEEecCCChH----------------
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYD----------------   62 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~D~~d~~----------------   62 (287)
                      |||+|.||+++++.|+++|++|++++ |+........     ..+. ....++.++.+|+.|.+                
T Consensus        15 TGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   89 (291)
T 1e7w_A           15 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS-----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   89 (291)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-----HHHhhhcCCeeEEEEeecCCcccccccccccccccchH
Confidence            79999999999999999999999999 8765422111     0111 11347889999999988                


Q ss_pred             -HHHhhhhcC-----CccEEEecCCCCc-------c---------------------------cHHHHHHh----CC--C
Q 023110           63 -FVKSSLSAK-----GFDVVYDINGREA-------D---------------------------EVEPILDA----LP--N   96 (287)
Q Consensus        63 -~~~~~~~~~-----~~d~vi~~a~~~~-------~---------------------------~~~~ll~~----~~--~   96 (287)
                       ++.++++..     ++|++||+||...       .                           ++..++++    +.  +
T Consensus        90 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~  169 (291)
T 1e7w_A           90 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  169 (291)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence             888877643     7999999998631       0                           01122232    22  3


Q ss_pred             ------CccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC
Q 023110           97 ------LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP  162 (287)
Q Consensus        97 ------~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~  162 (287)
                            ..++|++||...+...           .....| .+|...+.+.+       ..++++..++||.+..+. .  
T Consensus       170 ~~~~~~~g~Iv~isS~~~~~~~-----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--  235 (291)
T 1e7w_A          170 AKHRGTNYSIINMVDAMTNQPL-----------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--  235 (291)
T ss_dssp             GGGSCSCEEEEEECCTTTTSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--
T ss_pred             CCCCCCCcEEEEEechhhcCCC-----------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--
Confidence                  5789999997764321           122234 89998877653       358999999999987764 1  


Q ss_pred             hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC--ccCCceEEecCCccc
Q 023110          163 VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (287)
                      +.+..........++   +.     -+...+|+|++++.++...  ...|+.+++.++..+
T Consensus       236 ~~~~~~~~~~~~~p~---~~-----r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          236 MPPAVWEGHRSKVPL---YQ-----RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             SCHHHHHHHHTTCTT---TT-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHhhCCC---CC-----CCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence            112222222222111   10     2457999999999998643  236888999887654

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.55  E-value=5.4e-14  Score=115.23  Aligned_cols=181  Identities=13%  Similarity=0.110  Sum_probs=118.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh-cCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|+++|++|++++|+.....+...     .+... ...+.++++|+.|.+++.++++..     ++|
T Consensus        39 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  113 (281)
T 4dry_A           39 TGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAG-----EIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLD  113 (281)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999999998765321111     11111 223589999999999988887643     789


Q ss_pred             EEEecCCCCcc---------------------c----HHHHHHhCC--C--CccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           75 VVYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        75 ~vi~~a~~~~~---------------------~----~~~ll~~~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      ++||+||....                     +    ++.++..+.  +  ..++|++||...+..           ..+
T Consensus       114 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----------~~~  182 (281)
T 4dry_A          114 LLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP-----------RPN  182 (281)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC-----------CTT
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC-----------CCC
Confidence            99999987321                     1    222333333  2  468999999775421           122


Q ss_pred             Ccch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ...| .+|...+.+.+       ..++++..++||.+..+...         ..... .... ........++..+|+|+
T Consensus       183 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~---------~~~~~-~~~~-~~~~~~~~~~~pedvA~  251 (281)
T 4dry_A          183 SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA---------RMSTG-VLQA-NGEVAAEPTIPIEHIAE  251 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----------------CE-EECT-TSCEEECCCBCHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh---------hhcch-hhhh-hhcccccCCCCHHHHHH
Confidence            2334 99998887653       35899999999998776311         11111 0000 01112234678999999


Q ss_pred             HHHHHHcCCcc
Q 023110          198 AFVQVLGNEKA  208 (287)
Q Consensus       198 ~~~~~~~~~~~  208 (287)
                      +++.++..+..
T Consensus       252 ~v~fL~s~~~~  262 (281)
T 4dry_A          252 AVVYMASLPLS  262 (281)
T ss_dssp             HHHHHHHSCTT
T ss_pred             HHHHHhCCCcc
Confidence            99999987653

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.55  E-value=1.6e-14  Score=118.42  Aligned_cols=193  Identities=16%  Similarity=0.165  Sum_probs=127.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||++++++|+++|++|++++|+.....+..        .+...++.++.+|+.|.+++.++++..     ++|+
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A           11 TGGASGLGRALVDRFVAEGARVAVLDKSAERLRELE--------VAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH--------HHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865532111        112357899999999999888877643     7899


Q ss_pred             EEecCCCCc-------------------------ccHHHHHHh----CC-CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           76 VYDINGREA-------------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        76 vi~~a~~~~-------------------------~~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      +||+||...                         .++..++++    +. +..++|++||...+...           ..
T Consensus        83 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~  151 (281)
T 3zv4_A           83 LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPN-----------GG  151 (281)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSS-----------SS
T ss_pred             EEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCC-----------CC
Confidence            999998621                         112223333    22 33689999997764211           12


Q ss_pred             Ccch-hhhHHHHHHhh------hCCCcEEEEecCeeecCCCCCC---hhH------HHHHHHHcCCCccCCCCCCceeee
Q 023110          126 KSRH-KGKLNTESVLE------SKGVNWTSLRPVYIYGPLNYNP---VEE------WFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~------~~~~~~~ilR~~~v~g~~~~~~---~~~------~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                      ...| .+|...+.+.+      ..++++..+.||.+..+.....   ...      ..........++         ..+
T Consensus       152 ~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~  222 (281)
T 3zv4_A          152 GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI---------GRM  222 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT---------SSC
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC---------CCC
Confidence            2234 99998887663      1249999999999987632110   000      011222222222         235


Q ss_pred             eeHHHHHHHHHHHHcCCc---cCCceEEecCCccc
Q 023110          190 GHVKDLARAFVQVLGNEK---ASRQVFNISGEKYV  221 (287)
Q Consensus       190 i~~~D~a~~~~~~~~~~~---~~~~~~~i~~~~~~  221 (287)
                      ...+|+|++++.++..+.   -.|+.+++.++..+
T Consensus       223 ~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~  257 (281)
T 3zv4_A          223 PALEEYTGAYVFFATRGDSLPATGALLNYDGGMGV  257 (281)
T ss_dssp             CCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGG
T ss_pred             CCHHHHHHHHHHhhcccccccccCcEEEECCCCcc
Confidence            668999999999997332   37899999998643

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.54  E-value=1.9e-13  Score=112.19  Aligned_cols=191  Identities=18%  Similarity=0.230  Sum_probs=124.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCC---hhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES---DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~   72 (287)
                      |||+|.||++++++|+++|++|++++|+.....+ +.+..   ...+......+.++++|+.|.+++.++++..     +
T Consensus        15 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   93 (285)
T 3sc4_A           15 SGGSRGIGLAIAKRVAADGANVALVAKSAEPHPK-LPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGG   93 (285)
T ss_dssp             ESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSS-SCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhh-hhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999999765221 11111   1112222457899999999999988887743     7


Q ss_pred             ccEEEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCC
Q 023110           73 FDVVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        73 ~d~vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (287)
                      +|++||+||...                    .++..+.++    ++  +..++|++||...+....         ....
T Consensus        94 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------~~~~  164 (285)
T 3sc4_A           94 IDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW---------LRPT  164 (285)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGG---------SCSH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCC---------CCCc
Confidence            999999999731                    122233343    33  456999999976542210         1112


Q ss_pred             cchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      .|..+|...+.+.+       ..++++..++||.+...        .+......... +       ...+...+|+|+++
T Consensus       165 ~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t--------~~~~~~~~~~~-~-------~~r~~~pedvA~~~  228 (285)
T 3sc4_A          165 PYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT--------AAVQNLLGGDE-A-------MARSRKPEVYADAA  228 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC--------HHHHHHHTSCC-C-------CTTCBCTHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc--------HHHHhhccccc-c-------ccCCCCHHHHHHHH
Confidence            24499998887653       36899999999843221        12222222211 1       11345789999999


Q ss_pred             HHHHcCCc-cCCceEEecC
Q 023110          200 VQVLGNEK-ASRQVFNISG  217 (287)
Q Consensus       200 ~~~~~~~~-~~~~~~~i~~  217 (287)
                      +.++.... ..|+.+.+.+
T Consensus       229 ~~l~s~~~~~tG~~i~~dg  247 (285)
T 3sc4_A          229 YVVLNKPSSYTGNTLLCED  247 (285)
T ss_dssp             HHHHTSCTTCCSCEEEHHH
T ss_pred             HHHhCCcccccceEEEEcC
Confidence            99997653 3455555444

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.53  E-value=2.8e-14  Score=114.94  Aligned_cols=173  Identities=17%  Similarity=0.202  Sum_probs=115.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh---hcCCeEEEEecCCChHHHHhhhhcC-----C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~D~~d~~~~~~~~~~~-----~   72 (287)
                      |||+|.||++++++|+++|++|++++|+.....+...     .+..   ....+.++.+|+.|.+++.++++..     +
T Consensus        13 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (250)
T 3nyw_A           13 TGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHD-----EIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGA   87 (250)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHH-----HHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            7999999999999999999999999998765321111     0111   0157889999999999888887642     7


Q ss_pred             ccEEEecCCCCcc-------------------cHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           73 FDVVYDINGREAD-------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        73 ~d~vi~~a~~~~~-------------------~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      +|++||+||....                   ++..++++    ++  +..++|++||...+..           ..+..
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~  156 (250)
T 3nyw_A           88 VDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYG-----------FADGG  156 (250)
T ss_dssp             EEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------CCTT
T ss_pred             CCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCC-----------CCCCc
Confidence            9999999997321                   12233333    33  5679999999765421           11122


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      .| .+|...+.+.+       ..++++..++||.+..+     +    ....  ....       ....+++.+|+|+++
T Consensus       157 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~-----~----~~~~--~~~~-------~~~~~~~p~dva~~v  218 (250)
T 3nyw_A          157 IYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD-----M----AKKA--GTPF-------KDEEMIQPDDLLNTI  218 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH-----H----HHHT--TCCS-------CGGGSBCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc-----h----hhhc--CCCc-------ccccCCCHHHHHHHH
Confidence            34 89998876653       35899999999988665     1    1111  1111       112468899999999


Q ss_pred             HHHHcCCc
Q 023110          200 VQVLGNEK  207 (287)
Q Consensus       200 ~~~~~~~~  207 (287)
                      +.++..+.
T Consensus       219 ~~l~s~~~  226 (250)
T 3nyw_A          219 RCLLNLSE  226 (250)
T ss_dssp             HHHHTSCT
T ss_pred             HHHHcCCC
Confidence            99998654

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.53  E-value=1.1e-13  Score=111.86  Aligned_cols=192  Identities=16%  Similarity=0.111  Sum_probs=118.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHh-hhhc-CCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-SLSA-KGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~-~~~~-~~~d~vi~   78 (287)
                      |||+|+||+++++.|+++|++|++++|+...... +.    . +......+..+  |..+.+.+.+ +.+. .++|++||
T Consensus         7 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~----~-l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~   78 (254)
T 1zmt_A            7 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE-LE----A-FAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS   78 (254)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH-HH----H-HHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----H-HHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence            7999999999999999999999999998654211 10    0 11112233333  5444332222 2111 17999999


Q ss_pred             cCCCC-cc--------------------cHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-h
Q 023110           79 INGRE-AD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        79 ~a~~~-~~--------------------~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (287)
                      +||.. ..                    ++..++++    +.  +..++|++||...+...           .+...| .
T Consensus        79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~  147 (254)
T 1zmt_A           79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW-----------KELSTYTS  147 (254)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC-----------TTCHHHHH
T ss_pred             CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC-----------CCchHHHH
Confidence            99864 11                    12223333    32  56799999997764221           122234 8


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHH-------HHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWF-------FHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      +|...+.+.+       ..++++.+++||.++||.........+       ........+.         ..+.+.+|+|
T Consensus       148 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~---------~~~~~p~dvA  218 (254)
T 1zmt_A          148 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL---------QRLGTQKELG  218 (254)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS---------SSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCC---------CCCcCHHHHH
Confidence            9998887653       358999999999998875322111111       1111111111         1256799999


Q ss_pred             HHHHHHHcCCc--cCCceEEecCCcc
Q 023110          197 RAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      ++++.++....  ..|+.+++.++..
T Consensus       219 ~~v~~l~s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          219 ELVAFLASGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             HHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             HHHHHHhCcccCCccCCEEEECCCch
Confidence            99999987543  3688999988753

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.52  E-value=4.9e-14  Score=115.87  Aligned_cols=173  Identities=15%  Similarity=0.109  Sum_probs=116.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh-cCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||++++++|+++|++|++++|+........     ..+... ...+.++.+|+.|.+++.++++..     ++|
T Consensus        34 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD  108 (286)
T 1xu9_A           34 TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV-----SHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD  108 (286)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865522111     011111 136889999999998888877632     799


Q ss_pred             EEEec-CCCCc-------------------ccHHHHHHhC----C-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           75 VVYDI-NGREA-------------------DEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        75 ~vi~~-a~~~~-------------------~~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +|||+ ++...                   .++.++++++    . +..++|++||...+...           .+...|
T Consensus       109 ~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  177 (286)
T 1xu9_A          109 MLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY-----------PMVAAY  177 (286)
T ss_dssp             EEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC-----------TTCHHH
T ss_pred             EEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCC-----------CCccHH
Confidence            99999 55421                   1222333332    2 34699999998764321           122334


Q ss_pred             -hhhHHHHHHhh---------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          130 -KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       130 -~~k~~~E~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                       .+|...+.+.+         ..++++++++||.+.++.     .    .....+         ......++.+|+|+.+
T Consensus       178 ~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~-----~----~~~~~~---------~~~~~~~~~~~vA~~i  239 (286)
T 1xu9_A          178 SASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET-----A----MKAVSG---------IVHMQAAPKEECALEI  239 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH-----H----HHHSCG---------GGGGGCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh-----H----HHhccc---------cccCCCCCHHHHHHHH
Confidence             89998876652         347999999999886651     1    111111         1123568899999999


Q ss_pred             HHHHcCCc
Q 023110          200 VQVLGNEK  207 (287)
Q Consensus       200 ~~~~~~~~  207 (287)
                      +..+..+.
T Consensus       240 ~~~~~~~~  247 (286)
T 1xu9_A          240 IKGGALRQ  247 (286)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHhcCC
Confidence            99997754

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.51  E-value=1.1e-13  Score=112.24  Aligned_cols=193  Identities=16%  Similarity=0.085  Sum_probs=118.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc------CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~------~~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+........     ..+.....++.++.+|+.|++++.++++.      .++|
T Consensus        11 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id   85 (260)
T 2qq5_A           11 TGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVA-----QEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLD   85 (260)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCce
Confidence            799999999999999999999999999865422111     11111134688999999999888877653      2579


Q ss_pred             EEEecCCCC---------------------------cccH----HHHHHhCC--CCccEEEEecceeeccCCCCCCCCCC
Q 023110           75 VVYDINGRE---------------------------ADEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD  121 (287)
Q Consensus        75 ~vi~~a~~~---------------------------~~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (287)
                      ++||+||..                           +.++    +.++..+.  +..++|++||...+..          
T Consensus        86 ~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------  155 (260)
T 2qq5_A           86 VLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY----------  155 (260)
T ss_dssp             EEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC----------
T ss_pred             EEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC----------
Confidence            999999421                           0112    22333333  5679999999876421          


Q ss_pred             CCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHH
Q 023110          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                        .+...| .+|...+.+.+       ..++++.+++||.+..+.........   .............+  .......+
T Consensus       156 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~pe  228 (260)
T 2qq5_A          156 --MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKE---EVLQDPVLKQFKSA--FSSAETTE  228 (260)
T ss_dssp             --CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC---------------------------CHHHHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccc---cccchhHHHHHHhh--hccCCCHH
Confidence              122334 89999887653       35899999999999877421100000   00000000000000  01135689


Q ss_pred             HHHHHHHHHHcCCcc---CCceEEe
Q 023110          194 DLARAFVQVLGNEKA---SRQVFNI  215 (287)
Q Consensus       194 D~a~~~~~~~~~~~~---~~~~~~i  215 (287)
                      |+|++++.++.....   .|+.+.+
T Consensus       229 ~va~~v~~l~s~~~~~~itG~~i~~  253 (260)
T 2qq5_A          229 LSGKCVVALATDPNILSLSGKVLPS  253 (260)
T ss_dssp             HHHHHHHHHHTCTTGGGGTTCEEEH
T ss_pred             HHHHHHHHHhcCcccccccceeech
Confidence            999999999876431   4555544

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.51  E-value=3e-13  Score=113.83  Aligned_cols=190  Identities=15%  Similarity=0.112  Sum_probs=123.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCC--ChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||+|.||++++++|+++|++|++++|+.....+....+  ....+.....++.++.+|+.|.+++.++++..     ++
T Consensus        51 TGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  130 (346)
T 3kvo_A           51 TGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGI  130 (346)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             eCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999977532211111  01112222357889999999999988888753     79


Q ss_pred             cEEEecCCCC--------------------cccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           74 DVVYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      |+|||+||..                    +.++..++++    ++  +..++|++||...+....         ..+..
T Consensus       131 DilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~---------~~~~~  201 (346)
T 3kvo_A          131 DILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW---------FKQHC  201 (346)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG---------TSSSH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC---------CCCch
Confidence            9999999963                    2223334444    33  557999999977643210         11222


Q ss_pred             ch-hhhHHHHHHhh----h--CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          128 RH-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       128 ~~-~~k~~~E~~~~----~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      .| .+|..++.+.+    +  .++++..+.||.++..        .+.+.+....+         ...+...+|+|++++
T Consensus       202 ~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T--------~~~~~~~~~~~---------~~r~~~pedvA~~v~  264 (346)
T 3kvo_A          202 AYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT--------AAMDMLGGPGI---------ESQCRKVDIIADAAY  264 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC--------HHHHHHCC--C---------GGGCBCTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc--------HHHHhhccccc---------cccCCCHHHHHHHHH
Confidence            34 89998876653    2  5799999999964332        11222211111         123457899999999


Q ss_pred             HHHcCCc-cCCceEEecC
Q 023110          201 QVLGNEK-ASRQVFNISG  217 (287)
Q Consensus       201 ~~~~~~~-~~~~~~~i~~  217 (287)
                      .++.... ..|+.+ +.+
T Consensus       265 ~L~s~~~~itG~~i-vdg  281 (346)
T 3kvo_A          265 SIFQKPKSFTGNFV-IDE  281 (346)
T ss_dssp             HHHTSCTTCCSCEE-EHH
T ss_pred             HHHhcCCCCCceEE-ECC
Confidence            9997732 255544 544

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.50  E-value=2.6e-13  Score=110.78  Aligned_cols=185  Identities=18%  Similarity=0.182  Sum_probs=119.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCCh---hhhhhhcCCeEEEEecCCChHHHHhhhhcC-----C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD---QEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~   72 (287)
                      |||+|.||++++++|.++|++|++++|+...... +.+...   ..+......+.++.+|+.|.+++.++++..     +
T Consensus        12 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   90 (274)
T 3e03_A           12 TGASRGIGLAIALRAARDGANVAIAAKSAVANPK-LPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGG   90 (274)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTT-SCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeccchhhhh-hHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999999765222 111111   111222457889999999999988887643     7


Q ss_pred             ccEEEecCCCCc--------------------ccHHH----HHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCC
Q 023110           73 FDVVYDINGREA--------------------DEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        73 ~d~vi~~a~~~~--------------------~~~~~----ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (287)
                      +|++||+||...                    .++..    ++..+.  +..++|++||...+....         ..+.
T Consensus        91 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------~~~~  161 (274)
T 3e03_A           91 IDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW---------WGAH  161 (274)
T ss_dssp             CCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH---------HHHC
T ss_pred             CCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC---------CCCC
Confidence            999999999731                    12222    333333  557999999977543210         0111


Q ss_pred             c-chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          127 S-RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       127 ~-~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      . |..+|...+.+.+       ..++++..+.||.+....    +.     ....+.+         ...+...+|+|++
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~----~~-----~~~~~~~---------~~~~~~pedvA~~  223 (274)
T 3e03_A          162 TGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD----AI-----NMLPGVD---------AAACRRPEIMADA  223 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------------CCC---------GGGSBCTHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc----hh-----hhccccc---------ccccCCHHHHHHH
Confidence            2 3489998887653       358999999999543221    11     1111111         1125679999999


Q ss_pred             HHHHHcCCcc--CCceE
Q 023110          199 FVQVLGNEKA--SRQVF  213 (287)
Q Consensus       199 ~~~~~~~~~~--~~~~~  213 (287)
                      ++.++.....  .|+.+
T Consensus       224 v~~l~s~~~~~itG~~i  240 (274)
T 3e03_A          224 AHAVLTREAAGFHGQFL  240 (274)
T ss_dssp             HHHHHTSCCTTCCSCEE
T ss_pred             HHHHhCccccccCCeEE
Confidence            9999975432  56555

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.50  E-value=6.9e-13  Score=106.21  Aligned_cols=197  Identities=13%  Similarity=0.131  Sum_probs=129.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|.++|.+|++.+|+.+...+..     .++.....++.++++|++|++++++++++.     ++|+
T Consensus        13 TGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~-----~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   87 (254)
T 4fn4_A           13 TGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIV-----QELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDV   87 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876532211     122222457889999999999988887642     7999


Q ss_pred             EEecCCCCc---------------------cc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREA---------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~---------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||...                     .+    ++.++..+.  +..++|++||...+-..          +....|
T Consensus        88 LVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~----------~~~~~Y  157 (254)
T 4fn4_A           88 LCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGG----------FAGAPY  157 (254)
T ss_dssp             EEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSS----------SSCHHH
T ss_pred             EEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCC----------CCChHH
Confidence            999998531                     11    333444443  56799999997653211          111123


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh--hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      ..+|..+..+.+       .+|+++..|.||.+-.|......  .....+......  +..+      -+...+|+|.++
T Consensus       158 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~--~~~~------R~g~pediA~~v  229 (254)
T 4fn4_A          158 TVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLM--SLSS------RLAEPEDIANVI  229 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHH--TTCC------CCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcC--CCCC------CCcCHHHHHHHH
Confidence            488888776553       46899999999999776421111  111111111111  1111      134589999999


Q ss_pred             HHHHcCCc--cCCceEEecCCcc
Q 023110          200 VQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      +.++....  -.|+.+.+.++..
T Consensus       230 ~fLaSd~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          230 VFLASDEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhCchhcCCcCCEEEeCCCcc
Confidence            99986432  3788999988753

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.50  E-value=4e-13  Score=109.43  Aligned_cols=193  Identities=16%  Similarity=0.092  Sum_probs=124.1

Q ss_pred             CCc--ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-------
Q 023110            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-------   71 (287)
Q Consensus         1 tGa--tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-------   71 (287)
                      |||  +|.||++++++|+++|++|++++|+.....+.+.       .+...++.++.+|+.|++++.++++..       
T Consensus        13 TGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A           13 SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT-------DRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             CCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH-------TTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             ECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH-------HhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            788  9999999999999999999999998754211111       011246788999999999998888743       


Q ss_pred             -CccEEEecCCCCcc-------------------------cHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCC
Q 023110           72 -GFDVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETD  121 (287)
Q Consensus        72 -~~d~vi~~a~~~~~-------------------------~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (287)
                       ++|++||+||....                         ++..+++++.    ...++|++||...++           
T Consensus        86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~-----------  154 (269)
T 2h7i_A           86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA-----------  154 (269)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC-----------
T ss_pred             CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc-----------
Confidence             79999999986430                         1223444432    225899999865421           


Q ss_pred             CCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC----hhHH-------HHHHHHcCCCccCCCC
Q 023110          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP----VEEW-------FFHRLKAGRPIPIPGS  182 (287)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~----~~~~-------~~~~~~~~~~~~~~~~  182 (287)
                       ......| .+|...+.+.+       ..++++..++||.+..+.....    ....       +........++   + 
T Consensus       155 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~-  229 (269)
T 2h7i_A          155 -MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI---G-  229 (269)
T ss_dssp             -CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT---C-
T ss_pred             -cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCc---c-
Confidence             1122334 89998887653       3589999999998866510000    0000       01111111111   1 


Q ss_pred             CCceeeeeeHHHHHHHHHHHHcCCc--cCCceEEecCCcc
Q 023110          183 GIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       183 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                          +.+...+|+|++++.++....  ..|+.+.+.++..
T Consensus       230 ----rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  265 (269)
T 2h7i_A          230 ----WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH  265 (269)
T ss_dssp             ----CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred             ----cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCee
Confidence                024557999999999986532  3688888888753

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.49  E-value=2.1e-13  Score=109.59  Aligned_cols=181  Identities=15%  Similarity=0.112  Sum_probs=118.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh-hcCCeEEEEecC--CChHHHHhhhhcC-----C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDR--KDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~D~--~d~~~~~~~~~~~-----~   72 (287)
                      |||+|+||++++++|+++|++|++++|+.....+...     .+.. ......++.+|+  .+.+++.++++..     +
T Consensus        20 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~   94 (247)
T 3i1j_A           20 TGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSD-----QIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGR   94 (247)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHH-----HHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999998765321110     1111 124677888888  8888887776643     7


Q ss_pred             ccEEEecCCCC---------------------cccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           73 FDVVYDINGRE---------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        73 ~d~vi~~a~~~---------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      +|++||+||..                     ..++..++++    ++  +..++|++||...+..           ..+
T Consensus        95 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~  163 (247)
T 3i1j_A           95 LDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKG-----------RAN  163 (247)
T ss_dssp             CSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSC-----------CTT
T ss_pred             CCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCC-----------CCC
Confidence            99999999863                     1122333333    34  5579999999765422           112


Q ss_pred             Ccch-hhhHHHHHHhh-------h-CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          126 KSRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~-~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ...| .+|...+.+.+       . .++++..++||.+..+     +    ........         ....+...+|+|
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~-----~----~~~~~~~~---------~~~~~~~p~dva  225 (247)
T 3i1j_A          164 WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG-----M----RAQAYPDE---------NPLNNPAPEDIM  225 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH-----H----HHHHSTTS---------CGGGSCCGGGGT
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc-----c----chhccccc---------CccCCCCHHHHH
Confidence            2234 89998887653       2 5788999999987554     1    11111111         112345689999


Q ss_pred             HHHHHHHcCCc--cCCceEEe
Q 023110          197 RAFVQVLGNEK--ASRQVFNI  215 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i  215 (287)
                      ++++.++....  ..|+.+++
T Consensus       226 ~~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          226 PVYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEC
T ss_pred             HHHHHHhCchhccccCeeecC
Confidence            99999986432  25666554

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.48  E-value=3.2e-13  Score=118.66  Aligned_cols=198  Identities=16%  Similarity=0.125  Sum_probs=129.7

Q ss_pred             CCcccchHHHHHHHHHHcCCe-EEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~----~~d~   75 (287)
                      |||+|+||.+++++|.++|++ |++++|+..... ...+ ....+.....++.++.+|+.|.+++..+++..    .+|.
T Consensus       232 TGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~-~~~~-l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g~ld~  309 (486)
T 2fr1_A          232 TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDAD-GAGE-LVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSA  309 (486)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGST-THHH-HHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEE
T ss_pred             ECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcH-HHHH-HHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999995 999999864311 0000 00112222356889999999999999999843    4699


Q ss_pred             EEecCCCC--------------------cccHHHHHHhCC--CCccEEEEeccee-eccCCCCCCCCCCCCCCCcchhhh
Q 023110           76 VYDINGRE--------------------ADEVEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRHKGK  132 (287)
Q Consensus        76 vi~~a~~~--------------------~~~~~~ll~~~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~~~~~k  132 (287)
                      |||+||..                    +.++.++.+++.  +.++||++||... ++...           ...|..+|
T Consensus       310 VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g-----------~~~Yaaak  378 (486)
T 2fr1_A          310 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG-----------LGGYAPGN  378 (486)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT-----------CTTTHHHH
T ss_pred             EEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCC-----------CHHHHHHH
Confidence            99999973                    234566777766  6789999999754 33211           12344888


Q ss_pred             HHHHHHh---hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccC
Q 023110          133 LNTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       133 ~~~E~~~---~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (287)
                      ...+.+.   +..++++++++||.+.+++    +...    ... ..+   .  ......++.+|+++++..++.++.. 
T Consensus       379 a~l~~la~~~~~~gi~v~~i~pG~~~~~g----m~~~----~~~-~~~---~--~~g~~~i~~e~~a~~l~~~l~~~~~-  443 (486)
T 2fr1_A          379 AYLDGLAQQRRSDGLPATAVAWGTWAGSG----MAEG----PVA-DRF---R--RHGVIEMPPETACRALQNALDRAEV-  443 (486)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEECCBC---------------------C---T--TTTEECBCHHHHHHHHHHHHHTTCS-
T ss_pred             HHHHHHHHHHHhcCCeEEEEECCeeCCCc----ccch----hHH-HHH---H--hcCCCCCCHHHHHHHHHHHHhCCCC-
Confidence            8877654   4578999999999987763    1110    000 111   1  1224679999999999999987653 


Q ss_pred             CceEEecCCcccCHHHHHHHHH
Q 023110          210 RQVFNISGEKYVTFDGLARACA  231 (287)
Q Consensus       210 ~~~~~i~~~~~~s~~e~~~~i~  231 (287)
                        .+.+..   +.|..+...+.
T Consensus       444 --~~~v~~---~d~~~~~~~~~  460 (486)
T 2fr1_A          444 --CPIVID---VRWDRFLLAYT  460 (486)
T ss_dssp             --SCEECE---ECHHHHHHHHT
T ss_pred             --eEEEEe---CCHHHHhhhhc
Confidence              223322   56666655443

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.48  E-value=4.6e-13  Score=108.29  Aligned_cols=192  Identities=17%  Similarity=0.197  Sum_probs=128.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|.++|++|++.+|+.+...+.        ..+...++..+++|+.|++++++++++.     ++|+
T Consensus        35 TGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~--------~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           35 TGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAA--------IAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999987653221        2223467889999999999888887642     7999


Q ss_pred             EEecCCCCc--------------------ccHHHHHHh----CCCCccEEEEecceeeccCCCCCCCCCCCCCCCcchhh
Q 023110           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  131 (287)
                      +||+||...                    .++..+.++    +++..++|++||.......+          ....|..+
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~----------~~~~Y~as  176 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTP----------AFSVYAAS  176 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCT----------TCHHHHHH
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCC----------CchHHHHH
Confidence            999998732                    123333333    23345899999876532111          11123489


Q ss_pred             hHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-----C-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----P-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      |..+..+.+       ..|+++..|.||.+..|.-..     . ....+...+.+..|+..         +...+|+|.+
T Consensus       177 Kaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR---------~g~peeiA~~  247 (273)
T 4fgs_A          177 KAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGR---------VGRAEEVAAA  247 (273)
T ss_dssp             HHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSS---------CBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCC---------CcCHHHHHHH
Confidence            998876653       468999999999997764111     0 01122333333333322         3348999999


Q ss_pred             HHHHHcCCc--cCCceEEecCCc
Q 023110          199 FVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++.++....  -.|+.+.+.++.
T Consensus       248 v~FLaSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          248 ALFLASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHhCchhcCccCCeEeECcCh
Confidence            999986432  378899988874

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.48  E-value=9.8e-14  Score=111.18  Aligned_cols=195  Identities=14%  Similarity=0.131  Sum_probs=129.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|.++|++|++.+|+.+...+..     ..+.....++..+++|++|++++++++++.     ++|+
T Consensus        15 TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~-----~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   89 (255)
T 4g81_D           15 TGSARGLGFAYAEGLAAAGARVILNDIRATLLAESV-----DTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDI   89 (255)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-----HHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence            899999999999999999999999999876532211     112222457889999999999888777642     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC---CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||....                    +    ++.++..+.   +..++|++||...+...+          ....|
T Consensus        90 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~----------~~~~Y  159 (255)
T 4g81_D           90 LINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARP----------TVAPY  159 (255)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCT----------TCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCC----------CchhH
Confidence            9999997421                    1    233444442   446999999977542211          11123


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      ..+|..+..+.+       ..|+++..|.||.+..|...... ...+...+.+..++..         +...+|+|.+++
T Consensus       160 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R---------~g~pediA~~v~  230 (255)
T 4g81_D          160 TAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQR---------WGRPEELIGTAI  230 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCS---------CBCGGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCC---------CcCHHHHHHHHH
Confidence            388988776553       46899999999999776311000 0112222333333322         345799999999


Q ss_pred             HHHcCCc--cCCceEEecCCc
Q 023110          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (287)
                      .++....  -.|+.+.+.++.
T Consensus       231 fL~S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          231 FLSSKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhCchhCCCcCCEEEECCCe
Confidence            9885432  378899998874

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.47  E-value=1.4e-12  Score=115.15  Aligned_cols=199  Identities=17%  Similarity=0.171  Sum_probs=131.3

Q ss_pred             CCcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||+|+||.+++++|.++|+ +|++++|+..... ...+ ....+.....++.++.+|+.|.+++.++++...+|+|||+
T Consensus       265 TGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~-~~~~-l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~VVh~  342 (511)
T 2z5l_A          265 TGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAP-GAAE-LAEELRGHGCEVVHAACDVAERDALAALVTAYPPNAVFHT  342 (511)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGST-THHH-HHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccH-HHHH-HHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcEEEEC
Confidence            79999999999999999999 5888999864311 0000 0011121234688999999999999999985569999999


Q ss_pred             CCCC--------------------cccHHHHHHhCC---CCccEEEEeccee-eccCCCCCCCCCCCCCCCcchhhhHHH
Q 023110           80 NGRE--------------------ADEVEPILDALP---NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRHKGKLNT  135 (287)
Q Consensus        80 a~~~--------------------~~~~~~ll~~~~---~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~~~~~k~~~  135 (287)
                      ||..                    +.++.++.+++.   +.++||++||... ++..           ....|..+|..+
T Consensus       343 AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~-----------g~~~YaaaKa~l  411 (511)
T 2z5l_A          343 AGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA-----------GQGAYAAANAAL  411 (511)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT-----------TBHHHHHHHHHH
T ss_pred             CcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC-----------CCHHHHHHHHHH
Confidence            9973                    223556777765   4679999999753 3321           112244899988


Q ss_pred             HHHhh---hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCce
Q 023110          136 ESVLE---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV  212 (287)
Q Consensus       136 E~~~~---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~  212 (287)
                      +.+.+   ..++++++++||.+-+.+-.....   ......           ..+..++.+|+++++..++.++..   .
T Consensus       412 d~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~---~~~~~~-----------~g~~~l~~e~~a~~l~~al~~~~~---~  474 (511)
T 2z5l_A          412 DALAERRRAAGLPATSVAWGLWGGGGMAAGAG---EESLSR-----------RGLRAMDPDAAVDALLGAMGRNDV---C  474 (511)
T ss_dssp             HHHHHHHHTTTCCCEEEEECCBCSTTCCCCHH---HHHHHH-----------HTBCCBCHHHHHHHHHHHHHHTCS---E
T ss_pred             HHHHHHHHHcCCcEEEEECCcccCCccccccc---HHHHHh-----------cCCCCCCHHHHHHHHHHHHhCCCC---E
Confidence            87763   578999999999873322111111   111110           113467899999999999977642   3


Q ss_pred             EEecCCcccCHHHHHHHHHH
Q 023110          213 FNISGEKYVTFDGLARACAK  232 (287)
Q Consensus       213 ~~i~~~~~~s~~e~~~~i~~  232 (287)
                      +.+..   +.|..+...+..
T Consensus       475 v~v~~---~d~~~~~~~~~~  491 (511)
T 2z5l_A          475 VTVVD---VDWERFAPATNA  491 (511)
T ss_dssp             EEECC---BCHHHHHHHHHH
T ss_pred             EEEEe---CCHHHHHhhhcc
Confidence            33433   557776665544

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.46  E-value=8.5e-13  Score=109.65  Aligned_cols=187  Identities=16%  Similarity=0.108  Sum_probs=119.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh-hcCCeEEEEecCCCh-HHHHhhhhcC-----Cc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDY-DFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~-~~~~~~~~~~-----~~   73 (287)
                      |||+|+||++++++|+++|++|++++|+.....+...     .+.. ...++.++.+|+.|. +.+..+++..     ++
T Consensus        18 TGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~i   92 (311)
T 3o26_A           18 TGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVE-----KLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKL   92 (311)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSC
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999999765322111     0111 124789999999998 7776666532     79


Q ss_pred             cEEEecCCCCc--------------------------------------------------cc----HHHHHHhCC--CC
Q 023110           74 DVVYDINGREA--------------------------------------------------DE----VEPILDALP--NL   97 (287)
Q Consensus        74 d~vi~~a~~~~--------------------------------------------------~~----~~~ll~~~~--~~   97 (287)
                      |++||+||...                                                  .+    ++.++..++  +.
T Consensus        93 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~  172 (311)
T 3o26_A           93 DILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDS  172 (311)
T ss_dssp             CEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS
T ss_pred             CEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCC
Confidence            99999999641                                                  11    223344444  55


Q ss_pred             ccEEEEecceeeccCCC--------------------------------CCCCCCCCCCCCcch-hhhHHHHHHhh----
Q 023110           98 EQFIYCSSAGVYLKSDL--------------------------------LPHCETDTVDPKSRH-KGKLNTESVLE----  140 (287)
Q Consensus        98 ~~~i~~Ss~~v~~~~~~--------------------------------~~~~e~~~~~~~~~~-~~k~~~E~~~~----  140 (287)
                      .++|++||...+.....                                ....+...+.+...| .+|...+.+.+    
T Consensus       173 ~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~  252 (311)
T 3o26_A          173 PRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLAN  252 (311)
T ss_dssp             CEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHh
Confidence            79999999765432100                                001111111222335 99999887763    


Q ss_pred             h-CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCcc-CCceEEecC
Q 023110          141 S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA-SRQVFNISG  217 (287)
Q Consensus       141 ~-~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~-~~~~~~i~~  217 (287)
                      + .++++..+.||.|..+...             +  .          .....++.++.++.++..+.. .+..|..++
T Consensus       253 e~~~i~v~~v~PG~v~T~~~~-------------~--~----------~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~s  306 (311)
T 3o26_A          253 KIPKFQVNCVCPGLVKTEMNY-------------G--I----------GNYTAEEGAEHVVRIALFPDDGPSGFFYDCS  306 (311)
T ss_dssp             HCTTSEEEEECCCSBCSGGGT-------------T--C----------CSBCHHHHHHHHHHHHTCCSSCCCSCEETC-
T ss_pred             hcCCceEEEecCCceecCCcC-------------C--C----------CCCCHHHHHHHHHHHHhCCCCCCCceEeccc
Confidence            2 3589999999988765210             0  0          114678999999988765432 334555544

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.46  E-value=3.3e-12  Score=103.08  Aligned_cols=194  Identities=11%  Similarity=0.092  Sum_probs=127.0

Q ss_pred             CCccc--chHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh-cCCeEEEEecCCChHHHHhhhhc-----CC
Q 023110            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KG   72 (287)
Q Consensus         1 tGatG--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~D~~d~~~~~~~~~~-----~~   72 (287)
                      |||+|  -||+++++.|.++|++|++.+|+.....+ +.    ....+. ..++.++++|++|++++.++++.     -+
T Consensus        12 TGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~-~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (256)
T 4fs3_A           12 MGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKE-LE----KLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGN   86 (256)
T ss_dssp             ECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHH-HH----HHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             ECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH----HHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            68876  79999999999999999999998655221 11    111111 24788999999999888877753     27


Q ss_pred             ccEEEecCCCCccc------------------------HHHHHHh----CCCCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           73 FDVVYDINGREADE------------------------VEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        73 ~d~vi~~a~~~~~~------------------------~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      +|++||++|.....                        ...+..+    +++..++|++||....-.           ..
T Consensus        87 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~-----------~~  155 (256)
T 4fs3_A           87 IDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFA-----------VQ  155 (256)
T ss_dssp             CSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSC-----------CT
T ss_pred             CCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccC-----------cc
Confidence            99999999863110                        1111111    224468999999764211           11


Q ss_pred             CCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       125 ~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      ....| .+|..++.+.+       ..|+++..|.||.+-.+.... ...+...+...+..++..         +...+|+
T Consensus       156 ~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R---------~g~peev  226 (256)
T 4fs3_A          156 NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKR---------NVDQVEV  226 (256)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSS---------CCCHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCC---------CcCHHHH
Confidence            12234 88988776553       468999999999987764221 122334444444434322         2348999


Q ss_pred             HHHHHHHHcCCc--cCCceEEecCCc
Q 023110          196 ARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      |.+++.++....  -.|+.+.+.++.
T Consensus       227 A~~v~fL~Sd~a~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          227 GKTAAYLLSDLSSGVTGENIHVDSGF  252 (256)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCchhcCccCCEEEECcCH
Confidence            999999885432  378899998874

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.46  E-value=3.3e-12  Score=103.02  Aligned_cols=186  Identities=15%  Similarity=0.152  Sum_probs=122.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|.++|++|++.+|+....               .....++++|+.+++++..+++..     ++|+
T Consensus        17 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   81 (261)
T 4h15_A           17 TAGTKGAGAATVSLFLELGAQVLTTARARPEG---------------LPEELFVEADLTTKEGCAIVAEATRQRLGGVDV   81 (261)
T ss_dssp             SCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------SCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSE
T ss_pred             eccCcHHHHHHHHHHHHcCCEEEEEECCchhC---------------CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999986431               123347899999998888776642     6999


Q ss_pred             EEecCCCCc----------------------cc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           76 VYDINGREA----------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~----------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      +||+||...                      .+    ++.++..+.  +..++|++||....-..          +....
T Consensus        82 lVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~----------~~~~~  151 (261)
T 4h15_A           82 IVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPL----------PESTT  151 (261)
T ss_dssp             EEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------TTTCH
T ss_pred             EEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCC----------CCccH
Confidence            999998521                      11    233444443  56789999997642110          11123


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-----------C--hhHHHHHHHHcCCCccCCCCCCce
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----------P--VEEWFFHRLKAGRPIPIPGSGIQV  186 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-----------~--~~~~~~~~~~~~~~~~~~~~~~~~  186 (287)
                      +| .+|..++.+.+       ..|+++..|.||.+-.|....           .  .............++.        
T Consensus       152 ~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg--------  223 (261)
T 4h15_A          152 AYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLG--------  223 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTS--------
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCC--------
Confidence            45 88988876553       468999999999886652000           0  0001111111122221        


Q ss_pred             eeeeeHHHHHHHHHHHHcCCc--cCCceEEecCCcc
Q 023110          187 TQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                       -+...+|+|.+++.++....  -.|+.+.+.++-.
T Consensus       224 -R~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          224 -RPAKPEEVANLIAFLASDRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             -SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred             -CCcCHHHHHHHHHHHhCchhcCccCcEEEECCcCc
Confidence             24558999999999885432  3788999988753

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.45  E-value=1.4e-12  Score=103.52  Aligned_cols=193  Identities=18%  Similarity=0.145  Sum_probs=129.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||++-||+++++.|.++|.+|++.+|+.....       .....+...++..+++|+.|+++++++++..++|++||+|
T Consensus        15 TGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~-------~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA   87 (247)
T 4hp8_A           15 TGANTGLGQAIAVGLAAAGAEVVCAARRAPDET-------LDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA   87 (247)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH-------HHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred             eCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHH-------HHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence            899999999999999999999999999864311       0122223467889999999999999888877899999999


Q ss_pred             CCCcc--------------------c----HHHHHHhCC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhH
Q 023110           81 GREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL  133 (287)
Q Consensus        81 ~~~~~--------------------~----~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~  133 (287)
                      |....                    +    ++.++..+.  + ..++|++||...+....          ....|..+|.
T Consensus        88 Gi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~----------~~~~Y~asKa  157 (247)
T 4hp8_A           88 GIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGI----------RVPSYTAAKH  157 (247)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCS----------SCHHHHHHHH
T ss_pred             CCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCC----------CChHHHHHHH
Confidence            97421                    1    233344332  3 46899999976532111          1112348898


Q ss_pred             HHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcC
Q 023110          134 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       134 ~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (287)
                      .+..+.+       ..|+++..|.||.+-.|...... .....+.+.+..++..         +-..+|+|.+++.++..
T Consensus       158 av~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR---------~g~peeiA~~v~fLaSd  228 (247)
T 4hp8_A          158 GVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGR---------WGHSEDIAGAAVFLSSA  228 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSS---------CBCTHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCC---------CcCHHHHHHHHHHHhCc
Confidence            8776543       46899999999998766311000 0112233333333322         33479999999998854


Q ss_pred             Cc--cCCceEEecCCc
Q 023110          206 EK--ASRQVFNISGEK  219 (287)
Q Consensus       206 ~~--~~~~~~~i~~~~  219 (287)
                      ..  -.|+.+.+.++.
T Consensus       229 ~a~~iTG~~i~VDGG~  244 (247)
T 4hp8_A          229 AADYVHGAILNVDGGW  244 (247)
T ss_dssp             GGTTCCSCEEEESTTG
T ss_pred             hhcCCcCCeEEECccc
Confidence            32  378899988874

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.45  E-value=2.9e-12  Score=103.06  Aligned_cols=196  Identities=17%  Similarity=0.163  Sum_probs=130.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|.++|.+|++.+|+.+... ..     ..+.+...++.++.+|++|++++++++++.     ++|+
T Consensus        13 TGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDi   86 (258)
T 4gkb_A           13 TGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FL-----DALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDG   86 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HH-----HHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HH-----HHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999876521 11     122233467899999999998888777642     7999


Q ss_pred             EEecCCCCc-------------------cc----HHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhh
Q 023110           76 VYDINGREA-------------------DE----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (287)
Q Consensus        76 vi~~a~~~~-------------------~~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  131 (287)
                      +||+||...                   .+    ++..+..++ +..++|++||...+.....          ...|..+
T Consensus        87 LVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~----------~~~Y~as  156 (258)
T 4gkb_A           87 LVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGN----------TSGYCAS  156 (258)
T ss_dssp             EEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSS----------CHHHHHH
T ss_pred             EEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCC----------chHHHHH
Confidence            999999731                   11    233344444 4468999999775432111          1123488


Q ss_pred             hHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-----hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      |..++.+.+       ..|+++..|.||.+-.|......     ............++   +     .-+...+|+|.++
T Consensus       157 Kaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---g-----~R~g~peeiA~~v  228 (258)
T 4gkb_A          157 KGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL---G-----RRFTTPDEIADTA  228 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT---T-----TSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC---C-----CCCcCHHHHHHHH
Confidence            988876653       46899999999999776421110     11122233332222   1     1244589999999


Q ss_pred             HHHHcCCc--cCCceEEecCCcc
Q 023110          200 VQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      +.++....  -.|+.+.+.++..
T Consensus       229 ~fLaS~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          229 VFLLSPRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHhCchhcCccCCeEEECCCcc
Confidence            99885432  3788999988753

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.40  E-value=1.4e-12  Score=109.13  Aligned_cols=142  Identities=15%  Similarity=0.090  Sum_probs=100.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh------hcCCeEEEEecCCChHHHHhhhhcC---
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE------FSSKILHLKGDRKDYDFVKSSLSAK---   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~D~~d~~~~~~~~~~~---   71 (287)
                      |||+|+||++++++|+++|++|+++.|+...... ..    .....      ...++.++.+|+.|.+++.++++..   
T Consensus         8 TGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~g   82 (327)
T 1jtv_A            8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKT-QG----RLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (327)
T ss_dssp             SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGG-TH----HHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             ECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHH-HH----HHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhcC
Confidence            8999999999999999999999999887544211 11    01111      0246889999999999999998743   


Q ss_pred             CccEEEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           72 GFDVVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        72 ~~d~vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      ++|++||+||...                    .++.+++++    +.  +..++|++||...+...           ..
T Consensus        83 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~-----------~~  151 (327)
T 1jtv_A           83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL-----------PF  151 (327)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-----------TT
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC-----------CC
Confidence            5999999998631                    123334444    33  66899999998764221           11


Q ss_pred             Ccch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCC
Q 023110          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL  158 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~  158 (287)
                      ...| .+|..++.+.+       ..++++++|+||.|..+.
T Consensus       152 ~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          152 NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence            2234 99999887663       368999999999998764

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.40  E-value=2.8e-12  Score=111.66  Aligned_cols=192  Identities=15%  Similarity=0.108  Sum_probs=122.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC------Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~------~~d   74 (287)
                      |||+|.||.++++.|.++|++|++++|+.....  +.    ....  ..++.++.+|+.|.+++.++++..      .+|
T Consensus       219 TGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~--l~----~~~~--~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          219 TGAARGIGATIAEVFARDGATVVAIDVDGAAED--LK----RVAD--KVGGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHH--HH----HHHH--HHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             eCCchHHHHHHHHHHHHCCCEEEEEeCCccHHH--HH----HHHH--HcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            799999999999999999999999998753210  00    0001  125678999999998888877642      399


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHhC----C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +|||+||...                    .++.++.+++    .  +..+||++||...+.....          ...|
T Consensus       291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g----------~~~Y  360 (454)
T 3u0b_A          291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRG----------QTNY  360 (454)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTT----------CHHH
T ss_pred             EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCC----------CHHH
Confidence            9999999742                    2233444442    2  4579999999775432211          1224


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      ..+|...+.+.+       ..++++..+.||.+.++.... .............+         ...+...+|+|+++..
T Consensus       361 aasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~---------l~r~g~pedvA~~v~f  430 (454)
T 3u0b_A          361 ATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEA-IPLATREVGRRLNS---------LFQGGQPVDVAELIAY  430 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----------CHHHHHSBT---------TSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhh-cchhhHHHHHhhcc---------ccCCCCHHHHHHHHHH
Confidence            489997665542       468999999999998764211 00000000111111         1123568999999999


Q ss_pred             HHcCC--ccCCceEEecCCcc
Q 023110          202 VLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~  220 (287)
                      ++...  ...|+.+++.++..
T Consensus       431 L~s~~a~~itG~~i~vdGG~~  451 (454)
T 3u0b_A          431 FASPASNAVTGNTIRVCGQAM  451 (454)
T ss_dssp             HHCGGGTTCCSCEEEESSSBS
T ss_pred             HhCCccCCCCCcEEEECCccc
Confidence            98643  23788999988653

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.38  E-value=7.7e-12  Score=100.29  Aligned_cols=189  Identities=14%  Similarity=0.139  Sum_probs=113.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEE-E--cCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHH-HhhhhcC-CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLF-T--RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLSAK-GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~-~~~~~~~-~~d~   75 (287)
                      |||+|+||++++++|+++|++|+++ +  |+.........        +. .+.+..  |..+.+.+ ..+.+.. ++|+
T Consensus         7 TGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~--------~~-~~~~~~--~~~~v~~~~~~~~~~~g~iD~   75 (244)
T 1zmo_A            7 THARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFES--------EN-PGTIAL--AEQKPERLVDATLQHGEAIDT   75 (244)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH--------HS-TTEEEC--CCCCGGGHHHHHGGGSSCEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHH--------Hh-CCCccc--CHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999 5  87654211110        00 122222  44443322 3333322 6999


Q ss_pred             EEecCCCCcc-----------------------cHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCC
Q 023110           76 VYDINGREAD-----------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        76 vi~~a~~~~~-----------------------~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (287)
                      +||+||....                       ++..++++    +.  +..++|++||...+....          ...
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------~~~  145 (244)
T 1zmo_A           76 IVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLA----------YNP  145 (244)
T ss_dssp             EEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT----------TCT
T ss_pred             EEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCC----------Cch
Confidence            9999986322                       12223333    32  567999999987653211          111


Q ss_pred             cchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCC--CChh-HHHHHHHHc-CCCccCCCCCCceeeeeeHHHH
Q 023110          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY--NPVE-EWFFHRLKA-GRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       127 ~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~--~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      .|..+|...+.+.+       ..++++..++||.+..+...  .... ......... ..+.         ..+...+|+
T Consensus       146 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pe~v  216 (244)
T 1zmo_A          146 LYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPL---------GRLGRPDEM  216 (244)
T ss_dssp             THHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTT---------CSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCC---------CCCcCHHHH
Confidence            24489998887653       35899999999998776320  0000 011111111 1111         135679999


Q ss_pred             HHHHHHHHcCCc--cCCceEEecCCc
Q 023110          196 ARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      |++++.++....  ..|+.+.+.++.
T Consensus       217 A~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          217 GALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             HHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             HHHHHHHcCccccCccCCEEEeCCCC
Confidence            999999987543  368888888763

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.36  E-value=1.1e-12  Score=106.32  Aligned_cols=185  Identities=15%  Similarity=0.132  Sum_probs=116.3

Q ss_pred             CCcccchHHHHHHHHHH---cCCeEEEEEcCCccccccCCCCChhhhhhh--cCCeEEEEecCCChHHHHhhhhcC----
Q 023110            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK----   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~~----   71 (287)
                      |||+|.||++++++|++   +|++|++++|+........     ..+...  ...+.++.+|+.|++++.++++..    
T Consensus        12 TGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (259)
T 1oaa_A           12 TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK-----EELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP   86 (259)
T ss_dssp             SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH-----HHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred             eCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHH-----HHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhcc
Confidence            79999999999999999   8999999999865422111     011111  246889999999999888777532    


Q ss_pred             ---Ccc--EEEecCCCCc---------cc--------------HHHHHHh----CC-C---CccEEEEecceeeccCCCC
Q 023110           72 ---GFD--VVYDINGREA---------DE--------------VEPILDA----LP-N---LEQFIYCSSAGVYLKSDLL  115 (287)
Q Consensus        72 ---~~d--~vi~~a~~~~---------~~--------------~~~ll~~----~~-~---~~~~i~~Ss~~v~~~~~~~  115 (287)
                         ++|  ++||+||...         ..              +..++++    +. .   ..++|++||...+..    
T Consensus        87 ~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~----  162 (259)
T 1oaa_A           87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP----  162 (259)
T ss_dssp             CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC----
T ss_pred             ccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC----
Confidence               467  9999998631         11              1123333    32 2   257999999876532    


Q ss_pred             CCCCCCCCCCCcch-hhhHHHHHHhh----h-CCCcEEEEecCeeecCCCCCChhHHHH---------HHHHcCCCccCC
Q 023110          116 PHCETDTVDPKSRH-KGKLNTESVLE----S-KGVNWTSLRPVYIYGPLNYNPVEEWFF---------HRLKAGRPIPIP  180 (287)
Q Consensus       116 ~~~e~~~~~~~~~~-~~k~~~E~~~~----~-~~~~~~ilR~~~v~g~~~~~~~~~~~~---------~~~~~~~~~~~~  180 (287)
                             ..+...| .+|...+.+.+    + .++++..+.||.+-.+     +...+.         ......  .+  
T Consensus       163 -------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~-----~~~~~~~~~~~~~~~~~~~~~--~p--  226 (259)
T 1oaa_A          163 -------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND-----MQQLARETSKDPELRSKLQKL--KS--  226 (259)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH-----HHHHHHHHCSCHHHHHHHHHH--HH--
T ss_pred             -------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcc-----hHHHHhhccCChhHHHHHHHh--hh--
Confidence                   1122334 99999887763    2 2488888999887544     111111         001000  00  


Q ss_pred             CCCCceeeeeeHHHHHHHHHHHHcCCc-cCCceEEe
Q 023110          181 GSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNI  215 (287)
Q Consensus       181 ~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~i  215 (287)
                           ...+.+.+|+|++++.++.... ..|+.+++
T Consensus       227 -----~~~~~~p~dvA~~v~~l~~~~~~itG~~i~v  257 (259)
T 1oaa_A          227 -----DGALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             -----TTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             -----cCCcCCHHHHHHHHHHHHhhccccCCcEEec
Confidence                 1135679999999999886422 24555544

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.34  E-value=6.8e-14  Score=117.09  Aligned_cols=145  Identities=14%  Similarity=0.130  Sum_probs=96.1

Q ss_pred             CCcccchHHHHHHHHHHcCC-------eEEEEEcCCccccccCCCCChhhhhhh-cCCeEEEEecCCChHHHHhhhhcCC
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKG   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~D~~d~~~~~~~~~~~~   72 (287)
                      |||+||||++++..|+++|+       +|+++++......  ..    .....+ ...+.++ +|+.+.+.+.++++  +
T Consensus        10 tGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~--~~----g~~~dl~~~~~~~~-~di~~~~~~~~a~~--~   80 (327)
T 1y7t_A           10 TGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKA--LE----GVVMELEDCAFPLL-AGLEATDDPKVAFK--D   80 (327)
T ss_dssp             SSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHH--HH----HHHHHHHTTTCTTE-EEEEEESCHHHHTT--T
T ss_pred             ECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhh--cc----chhhhhhccccccc-CCeEeccChHHHhC--C
Confidence            79999999999999999886       8999988642100  00    000000 1122233 67777666778887  9


Q ss_pred             ccEEEecCCCC--------------cccHHHHHHhCC--C-Cc-cEEEEecce-eeccCCCCCCC-CCC-CCCCCcch-h
Q 023110           73 FDVVYDINGRE--------------ADEVEPILDALP--N-LE-QFIYCSSAG-VYLKSDLLPHC-ETD-TVDPKSRH-K  130 (287)
Q Consensus        73 ~d~vi~~a~~~--------------~~~~~~ll~~~~--~-~~-~~i~~Ss~~-v~~~~~~~~~~-e~~-~~~~~~~~-~  130 (287)
                      +|+|||+|+..              +.++.++++++.  + .+ +++++|+.. +..     +.. +.. ...|...| .
T Consensus        81 ~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~-----~~~~~~~~~~~p~~~yg~  155 (327)
T 1y7t_A           81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA-----LIAYKNAPGLNPRNFTAM  155 (327)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-----HHHHHTCTTSCGGGEEEC
T ss_pred             CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH-----HHHHHHcCCCChhheecc
Confidence            99999999874              334777888876  4 44 777777643 111     011 111 23444455 8


Q ss_pred             hhHHHHHHh----hhCCCcEEEEecCeeecCCC
Q 023110          131 GKLNTESVL----ESKGVNWTSLRPVYIYGPLN  159 (287)
Q Consensus       131 ~k~~~E~~~----~~~~~~~~ilR~~~v~g~~~  159 (287)
                      +|+..|++.    +..+++.+++|+++||||+.
T Consensus       156 tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          156 TRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             chHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            999888765    35689999999999999975

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.29  E-value=2.2e-11  Score=101.46  Aligned_cols=183  Identities=13%  Similarity=0.087  Sum_probs=111.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccc-----cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-----AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----   70 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----   70 (287)
                      |||+|+||+++++.|+++|++|++.+|.....     ....... ...+..  .+. ...+|+.+.+++.++++.     
T Consensus        15 TGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~-~~~l~~--~~~-~~~~D~~~~~~~~~~~~~~~~~~   90 (319)
T 1gz6_A           15 TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKV-VEEIRR--RGG-KAVANYDSVEAGEKLVKTALDTF   90 (319)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHH-HHHHHH--TTC-EEEEECCCGGGHHHHHHHHHHHT
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHH-HHHHHh--hCC-eEEEeCCCHHHHHHHHHHHHHHc
Confidence            89999999999999999999999987642110     0000000 001110  111 245899998776665442     


Q ss_pred             CCccEEEecCCCCcc--------------------cH----HHHHHhCC--CCccEEEEeccee-eccCCCCCCCCCCCC
Q 023110           71 KGFDVVYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTV  123 (287)
Q Consensus        71 ~~~d~vi~~a~~~~~--------------------~~----~~ll~~~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~  123 (287)
                      .++|++||+||....                    ++    +.++..++  +..++|++||... ++..           
T Consensus        91 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~-----------  159 (319)
T 1gz6_A           91 GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF-----------  159 (319)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC-----------
Confidence            169999999986321                    12    22333333  5679999999643 3321           


Q ss_pred             CCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          124 DPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       124 ~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ....|..+|...+.+.+       ..++++..++||.+ .+... ...+                  .....+++.+|+|
T Consensus       160 ~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~-~~~~------------------~~~~~~~~p~dvA  219 (319)
T 1gz6_A          160 GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTE-TVMP------------------EDLVEALKPEYVA  219 (319)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTG-GGSC------------------HHHHHHSCGGGTH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccc-ccCC------------------hhhhccCCHHHHH
Confidence            11224489998876653       35899999999976 33110 0000                  0112345789999


Q ss_pred             HHHHHHHcCCc-cCCceEEecCC
Q 023110          197 RAFVQVLGNEK-ASRQVFNISGE  218 (287)
Q Consensus       197 ~~~~~~~~~~~-~~~~~~~i~~~  218 (287)
                      .+++.++..+. ..|+.|++.++
T Consensus       220 ~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          220 PLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             HHHHHHTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHhCchhhcCCCEEEECCC
Confidence            99999886542 26778887665

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.25  E-value=3.4e-11  Score=105.62  Aligned_cols=182  Identities=18%  Similarity=0.136  Sum_probs=121.2

Q ss_pred             CCcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~----~~d~   75 (287)
                      |||+|.||.++++.|.++|+ +|++++|+..... ...+ ....+......+.++.+|+.|.+++.++++..    .+|+
T Consensus       245 TGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~-~~~~-l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~ld~  322 (496)
T 3mje_A          245 TGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAP-GAAE-LRAELEQLGVRVTIAACDAADREALAALLAELPEDAPLTA  322 (496)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGST-THHH-HHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSCEEE
T ss_pred             ECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChH-HHHH-HHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCCCeE
Confidence            79999999999999999998 7888888743311 0000 00122222457899999999999999998753    5899


Q ss_pred             EEecCCCC---------------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhh
Q 023110           76 VYDINGRE---------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (287)
Q Consensus        76 vi~~a~~~---------------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k  132 (287)
                      |||+||..                     +.++.++.+++.  ...+||++||...+-...+          ...|..+|
T Consensus       323 vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g----------~~~YaAaK  392 (496)
T 3mje_A          323 VFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGG----------QPGYAAAN  392 (496)
T ss_dssp             EEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTT----------CHHHHHHH
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCC----------cHHHHHHH
Confidence            99999874                     223556777765  6679999999765321111          12244888


Q ss_pred             HHHHHHh---hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCc
Q 023110          133 LNTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       133 ~~~E~~~---~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (287)
                      ...+.+.   +..+++++.|.||.+.+++-...  ......+..           .....+..++.++++..++..+.
T Consensus       393 a~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~--~~~~~~l~~-----------~g~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          393 AYLDALAEHRRSLGLTASSVAWGTWGEVGMATD--PEVHDRLVR-----------QGVLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEECEESSSCC--------CHHHHH-----------TTEEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhcCCeEEEEECCcccCCccccC--hHHHHHHHh-----------cCCCCCCHHHHHHHHHHHHcCCC
Confidence            8887665   45799999999998876542110  000011111           11345678999999999997654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.23  E-value=1.7e-10  Score=102.15  Aligned_cols=200  Identities=16%  Similarity=0.088  Sum_probs=123.7

Q ss_pred             CCcccchHHHHHHHHHHcCCe-EEEE-EcCCcccc---------ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhh
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQ-VTLF-TRGKAPIA---------QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS   69 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~-V~~~-~r~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~   69 (287)
                      |||+|.||.++++.|.++|++ |+.+ +|+.....         ....+ ....+......+.++.+|+.|.+++.++++
T Consensus       257 TGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~  335 (525)
T 3qp9_A          257 TGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAG-LVAELADLGATATVVTCDLTDAEAAARLLA  335 (525)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHH-HHHHHHHHTCEEEEEECCTTSHHHHHHHHH
T ss_pred             ECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHH-HHHHHHhcCCEEEEEECCCCCHHHHHHHHH
Confidence            899999999999999999998 5555 67743200         00000 011222234578999999999999999988


Q ss_pred             cC----CccEEEecCCCC--------------------cccHHHHHHhCC------C-CccEEEEecceeeccCCCCCCC
Q 023110           70 AK----GFDVVYDINGRE--------------------ADEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHC  118 (287)
Q Consensus        70 ~~----~~d~vi~~a~~~--------------------~~~~~~ll~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~  118 (287)
                      ..    .+|.|||+||..                    +.++.++.+++.      + ..+||++||...+-...+    
T Consensus       336 ~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~g----  411 (525)
T 3qp9_A          336 GVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAG----  411 (525)
T ss_dssp             TSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCTT----
T ss_pred             HHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCCC----
Confidence            53    589999999973                    223444555533      2 679999999765422111    


Q ss_pred             CCCCCCCCcchhhhHHHHHHhh---hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          119 ETDTVDPKSRHKGKLNTESVLE---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       119 e~~~~~~~~~~~~k~~~E~~~~---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                            ...|..+|..++.+.+   ..+++++.|.||.+-++.....   .........           ....+..+++
T Consensus       412 ------~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~~~---~~~~~~~~~-----------g~~~l~pee~  471 (525)
T 3qp9_A          412 ------QGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVTEG---ATGERLRRL-----------GLRPLAPATA  471 (525)
T ss_dssp             ------CHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGGSS---HHHHHHHHT-----------TBCCBCHHHH
T ss_pred             ------CHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccccccch---hhHHHHHhc-----------CCCCCCHHHH
Confidence                  1224489998887763   4689999999998822211000   111111111           1234679999


Q ss_pred             HHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHH
Q 023110          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (287)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~  231 (287)
                      ++++..++..+..   ...+..   +.|..+...+.
T Consensus       472 a~~l~~~l~~~~~---~v~v~~---~dw~~~~~~~~  501 (525)
T 3qp9_A          472 LTALDTALGHGDT---AVTIAD---VDWSSFAPGFT  501 (525)
T ss_dssp             HHHHHHHHHHTCS---EEEECC---BCHHHHHHHHH
T ss_pred             HHHHHHHHhCCCC---eEEEEe---CCHHHHHhhcc
Confidence            9999999977642   233332   45655555443

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.23  E-value=3e-10  Score=93.73  Aligned_cols=200  Identities=9%  Similarity=-0.049  Sum_probs=115.7

Q ss_pred             CCcc--cchHHHHHHHHHHcCCeEEEEEcCCcc-------ccccCCCCChhhhhhhc--CCeEEEEec--------CC--
Q 023110            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAP-------IAQQLPGESDQEFAEFS--SKILHLKGD--------RK--   59 (287)
Q Consensus         1 tGat--G~iG~~l~~~l~~~g~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~--~~~~~i~~D--------~~--   59 (287)
                      |||+  |.||++++++|+++|++|++++|++..       ....+...  ..+....  .....+.+|        +.  
T Consensus        14 TGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dv~~D   91 (297)
T 1d7o_A           14 AGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS--RVLPDGSLMEIKKVYPLDAVFDNPEDVPED   91 (297)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG--GBCTTSSBCCEEEEEEECTTCCSGGGSCHH
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh--hhhccccccccccccccceeccchhhhhhh
Confidence            7998  999999999999999999999865210       00011100  0000000  002333433        22  


Q ss_pred             --C--------hHHHHhhhhc-----CCccEEEecCCCCc----------------------ccHHHHHHhCC----CCc
Q 023110           60 --D--------YDFVKSSLSA-----KGFDVVYDINGREA----------------------DEVEPILDALP----NLE   98 (287)
Q Consensus        60 --d--------~~~~~~~~~~-----~~~d~vi~~a~~~~----------------------~~~~~ll~~~~----~~~   98 (287)
                        |        .+++.++++.     .++|++||+||...                      .++..+++++.    ...
T Consensus        92 v~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g  171 (297)
T 1d7o_A           92 VKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGG  171 (297)
T ss_dssp             HHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred             hhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCc
Confidence              1        3344444432     16999999997521                      12333444433    236


Q ss_pred             cEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhh--------hCCCcEEEEecCeeecCCCCC-ChhHHHHH
Q 023110           99 QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFH  169 (287)
Q Consensus        99 ~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~--------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~  169 (287)
                      ++|++||...+.....         ....|..+|...+.+.+        ..++++..++||.+.++.... .....+..
T Consensus       172 ~iv~isS~~~~~~~~~---------~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~  242 (297)
T 1d7o_A          172 ASISLTYIASERIIPG---------YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIE  242 (297)
T ss_dssp             EEEEEECGGGTSCCTT---------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHH
T ss_pred             eEEEEeccccccCCCC---------cchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHHH
Confidence            8999999765421110         00124489998876552        258999999999999885332 12222222


Q ss_pred             HHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC--ccCCceEEecCCcc
Q 023110          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      ......++         ..+.+.+|+|++++.++...  ...|+.+++.++..
T Consensus       243 ~~~~~~p~---------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~  286 (297)
T 1d7o_A          243 YSYNNAPI---------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             HHHHHSSS---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HhhccCCC---------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCce
Confidence            22222221         12457999999999988643  23688999998753

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.08  E-value=1.5e-09  Score=90.74  Aligned_cols=142  Identities=7%  Similarity=-0.070  Sum_probs=89.2

Q ss_pred             CCccc--chHHHHHHHHHHcCCeEEEEEcCCc---------c---ccccCCCCChhhhhhhcCCeEEEEecCCCh--H--
Q 023110            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKA---------P---IAQQLPGESDQEFAEFSSKILHLKGDRKDY--D--   62 (287)
Q Consensus         1 tGatG--~iG~~l~~~l~~~g~~V~~~~r~~~---------~---~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~--~--   62 (287)
                      |||++  .||.+++++|.++|++|++.+|++.         .   ........     ......+.++.+|+.+.  +  
T Consensus         8 TGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~~~Dv~~~~~~~~   82 (329)
T 3lt0_A            8 AGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK-----DKKMNILDMLPFDASFDTANDI   82 (329)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSS-----SCBCCEEEEEECCTTCSSGGGC
T ss_pred             ECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhh-----cccccccccccccccccchhhh
Confidence            68764  9999999999999999998876641         1   00000000     00013467888888776  5  


Q ss_pred             ----------------HHHhhhhc-----CCccEEEecCCCCc----------------------ccHHHHHHh----CC
Q 023110           63 ----------------FVKSSLSA-----KGFDVVYDINGREA----------------------DEVEPILDA----LP   95 (287)
Q Consensus        63 ----------------~~~~~~~~-----~~~d~vi~~a~~~~----------------------~~~~~ll~~----~~   95 (287)
                                      ++.++++.     .++|++||+||...                      .++..+.++    ++
T Consensus        83 ~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~  162 (329)
T 3lt0_A           83 DEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMK  162 (329)
T ss_dssp             CHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             hhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence                            66655543     26999999998521                      112223333    33


Q ss_pred             CCccEEEEecceeeccCCCCCCCCCCCCCCC-cchhhhHHHHHHhh-------h-CCCcEEEEecCeeecC
Q 023110           96 NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGP  157 (287)
Q Consensus        96 ~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~-~~~~~k~~~E~~~~-------~-~~~~~~ilR~~~v~g~  157 (287)
                      ...++|++||...+....          ... .|..+|...+.+.+       . .++++..+.||.+..+
T Consensus       163 ~~g~Iv~isS~~~~~~~~----------~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          163 PQSSIISLTYHASQKVVP----------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             EEEEEEEEECGGGTSCCT----------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred             hCCeEEEEeCccccCCCC----------cchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence            226899999976532111          111 34488988776542       3 6899999999998654

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.00  E-value=5.8e-09  Score=86.69  Aligned_cols=200  Identities=14%  Similarity=0.027  Sum_probs=111.9

Q ss_pred             CCc--ccchHHHHHHHHHHcCCeEEEEEcCCc-------cccccCCCCChhhhhhhc--CCeEEEEecC-----------
Q 023110            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKA-------PIAQQLPGESDQEFAEFS--SKILHLKGDR-----------   58 (287)
Q Consensus         1 tGa--tG~iG~~l~~~l~~~g~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~--~~~~~i~~D~-----------   58 (287)
                      |||  +|.||+++++.|+++|++|++++|++.       .....+...  ..+....  ....++.+|+           
T Consensus        15 TGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D   92 (315)
T 2o2s_A           15 AGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED--RKLPDGSLIEFAGVYPLDAAFDKPEDVPQD   92 (315)
T ss_dssp             ECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH--HBCTTSCBCCCSCEEECCTTCSSTTSSCHH
T ss_pred             eCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh--hhhhccccccccccccccccccccchhhhh
Confidence            688  899999999999999999999987531       000000000  0000000  0123444443           


Q ss_pred             -CC--------hHHHHhhhhc-----CCccEEEecCCCCc----------------------ccHHHHHHhCC----CCc
Q 023110           59 -KD--------YDFVKSSLSA-----KGFDVVYDINGREA----------------------DEVEPILDALP----NLE   98 (287)
Q Consensus        59 -~d--------~~~~~~~~~~-----~~~d~vi~~a~~~~----------------------~~~~~ll~~~~----~~~   98 (287)
                       .|        .+++..+++.     .++|++||+||...                      .++..+++++.    ...
T Consensus        93 v~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g  172 (315)
T 2o2s_A           93 IKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGG  172 (315)
T ss_dssp             HHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEE
T ss_pred             hhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC
Confidence             22        3344444432     16999999998531                      11333455533    226


Q ss_pred             cEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhh--------hCCCcEEEEecCeeecCCCC-------CCh
Q 023110           99 QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNY-------NPV  163 (287)
Q Consensus        99 ~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~--------~~~~~~~ilR~~~v~g~~~~-------~~~  163 (287)
                      ++|++||...+.....         ....|..+|...+.+.+        ..++++..++||.+..+...       ..+
T Consensus       173 ~Iv~isS~~~~~~~~~---------~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~  243 (315)
T 2o2s_A          173 SAVTLSYLAAERVVPG---------YGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSF  243 (315)
T ss_dssp             EEEEEEEGGGTSCCTT---------CCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCH
T ss_pred             EEEEEecccccccCCC---------ccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchh
Confidence            8999999765422110         00124489998776552        26899999999998664100       001


Q ss_pred             hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC--ccCCceEEecCCcc
Q 023110          164 EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      ...+........++         .-+...+|+|++++.++...  ...|+.+.+.++..
T Consensus       244 ~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          244 IDYAIDYSYNNAPL---------RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             HHHHHHHHHHHSSS---------CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHhccCCC---------CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCee
Confidence            11111111111111         12457899999999988642  23688888888753

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=98.99  E-value=1e-09  Score=99.22  Aligned_cols=188  Identities=11%  Similarity=0.014  Sum_probs=104.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCC-CCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP-GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||+|.||++++++|+++|++|++++|+......... ...+....+.......+.+|+.|.+++.++++..     ++|
T Consensus        25 TGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~iD  104 (613)
T 3oml_A           25 TGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAIKAFGRVD  104 (613)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC----------
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHHHHCCCCc
Confidence            8999999999999999999999999883221100000 0000011111111112358999988887777642     689


Q ss_pred             EEEecCCCCc--------------------ccHHHHHHh----CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      ++||+||...                    .++..+.++    ++  +..++|++||...+-...          ....|
T Consensus       105 iLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~----------~~~~Y  174 (613)
T 3oml_A          105 ILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNF----------GQVNY  174 (613)
T ss_dssp             CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCT----------TCHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC----------CChHH
Confidence            9999999731                    122233333    33  557999999976532111          11224


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      ..+|...+.+.+       ..++.+..+.||.+ .+......                   .......+..+|+|.+++.
T Consensus       175 ~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~-------------------~~~~~~~~~pedvA~~v~~  234 (613)
T 3oml_A          175 TAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGIL-------------------PDILFNELKPKLIAPVVAY  234 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCC-------------------CHHHHTTCCGGGTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhcc-------------------chhhhhcCCHHHHHHHHHH
Confidence            489998876653       35899999999853 21100000                   0011223468999999999


Q ss_pred             HHcCCc-cCCceEEecCC
Q 023110          202 VLGNEK-ASRQVFNISGE  218 (287)
Q Consensus       202 ~~~~~~-~~~~~~~i~~~  218 (287)
                      ++.... ..|+.+++.++
T Consensus       235 L~s~~~~~tG~~i~vdGG  252 (613)
T 3oml_A          235 LCHESCEDNGSYIESAAG  252 (613)
T ss_dssp             TTSTTCCCCSCEEEEETT
T ss_pred             hcCCCcCCCceEEEECCC
Confidence            886542 25667776543

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=98.96  E-value=2.1e-09  Score=89.56  Aligned_cols=208  Identities=12%  Similarity=-0.041  Sum_probs=98.4

Q ss_pred             CCc--ccchHHHHHHHHHHcCCeEEEEEcCC-----------ccccccCCCC-------Chhhhhhhc---CCeEEEEec
Q 023110            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGK-----------APIAQQLPGE-------SDQEFAEFS---SKILHLKGD   57 (287)
Q Consensus         1 tGa--tG~iG~~l~~~l~~~g~~V~~~~r~~-----------~~~~~~~~~~-------~~~~~~~~~---~~~~~i~~D   57 (287)
                      |||  +|.||+++++.|+++|++|++++|++           ... .....+       ....+....   ....++.+|
T Consensus        15 TGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   93 (319)
T 2ptg_A           15 AGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRF-EQDSFYAQEPSSKVAAEAAEKPVDLVFDKIYPLD   93 (319)
T ss_dssp             ECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC---------------------------------CCSEEEECC
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhh-hhhhhhhcchhhhHHHHhhhcccccccccccccc
Confidence            687  89999999999999999999998752           110 000000       000000000   013445444


Q ss_pred             C------------CC--------hHHHHhhhhc-----CCccEEEecCCCCc----------------------ccHHHH
Q 023110           58 R------------KD--------YDFVKSSLSA-----KGFDVVYDINGREA----------------------DEVEPI   90 (287)
Q Consensus        58 ~------------~d--------~~~~~~~~~~-----~~~d~vi~~a~~~~----------------------~~~~~l   90 (287)
                      +            .|        .+++.++++.     .++|++||+||...                      .++..+
T Consensus        94 ~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l  173 (319)
T 2ptg_A           94 AVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSL  173 (319)
T ss_dssp             TTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             ccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHH
Confidence            3            22        2244444432     17999999987421                      112334


Q ss_pred             HHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhh--------hCCCcEEEEecCeeecCC
Q 023110           91 LDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE--------SKGVNWTSLRPVYIYGPL  158 (287)
Q Consensus        91 l~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~--------~~~~~~~ilR~~~v~g~~  158 (287)
                      ++++.    ...++|++||...+.....         ....|..+|..++.+.+        ..++++..|+||.+..+.
T Consensus       174 ~~~~~~~m~~~g~Iv~isS~~~~~~~~~---------~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~  244 (319)
T 2ptg_A          174 LQHFLPLMKEGGSALALSYIASEKVIPG---------YGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRA  244 (319)
T ss_dssp             HHHHGGGEEEEEEEEEEEECC---------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC---
T ss_pred             HHHHHHHHhcCceEEEEeccccccccCc---------cchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChh
Confidence            44432    2268999999765422111         00124477877665542        268999999999987763


Q ss_pred             CCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC--ccCCceEEecCCcc
Q 023110          159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      ... ........... ..............+...+|+|++++.++...  ...|+.+.+.++..
T Consensus       245 ~~~-~~~~~~~~~~~-~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          245 ASA-IGKAGDKTFID-LAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             ------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred             hhh-cccccchhhHH-HHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence            111 00000000000 00000000001123467999999999998642  23688899988754

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.86  E-value=3.7e-08  Score=91.47  Aligned_cols=179  Identities=16%  Similarity=0.144  Sum_probs=118.3

Q ss_pred             CCcccchHHHHHHHHH-HcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC----Ccc
Q 023110            1 MGGTRFIGVFLSRLLV-KEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~-~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~----~~d   74 (287)
                      |||+|.+|+++++.|. ++|. +|+.++|+...... ..+ ....+......+.++.+|+.|.+++.++++..    .+|
T Consensus       536 tGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~-~~~-~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~~id  613 (795)
T 3slk_A          536 TGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASG-AAE-LVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEHPLT  613 (795)
T ss_dssp             ETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTT-HHH-HHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEE
T ss_pred             ccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHH-HHH-HHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCE
Confidence            6999999999999999 7898 58999998543110 000 00112222356889999999999999988753    589


Q ss_pred             EEEecCCCC--------------------cccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhH
Q 023110           75 VVYDINGRE--------------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL  133 (287)
Q Consensus        75 ~vi~~a~~~--------------------~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~  133 (287)
                      .|||+||..                    +.++.++.+++. .. +||++||...+-...+          ..+|..+|.
T Consensus       614 ~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-~iV~~SS~ag~~g~~g----------~~~YaAaka  682 (795)
T 3slk_A          614 AVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-ALVLFSSVSGVLGSGG----------QGNYAAANS  682 (795)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-EEEEEEETHHHHTCSS----------CHHHHHHHH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-EEEEEccHHhcCCCCC----------CHHHHHHHH
Confidence            999999873                    345667777765 44 8999999765422111          123448887


Q ss_pred             HHHHHh---hhCCCcEEEEecCeeecCCCCCChhHHH----HHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC
Q 023110          134 NTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWF----FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       134 ~~E~~~---~~~~~~~~ilR~~~v~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (287)
                      ..+.+.   +..|++++.|-||.+-.++    +...+    .......           ....+..++..+.+..++..+
T Consensus       683 ~~~alA~~~~~~Gi~v~sI~pG~v~t~g----~~~~~~~~~~~~~~~~-----------g~~~l~~~e~~~~~~~~l~~~  747 (795)
T 3slk_A          683 FLDALAQQRQSRGLPTRSLAWGPWAEHG----MASTLREAEQDRLARS-----------GLLPISTEEGLSQFDAACGGA  747 (795)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCSCCC----HHHHHHHHHHHHHHHT-----------TBCCCCHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHcCCeEEEEECCeECcch----hhccccHHHHHHHHhc-----------CCCCCCHHHHHHHHHHHHhCC
Confidence            666554   4579999999999876543    22111    1111111           123456788888888888765


Q ss_pred             c
Q 023110          207 K  207 (287)
Q Consensus       207 ~  207 (287)
                      .
T Consensus       748 ~  748 (795)
T 3slk_A          748 H  748 (795)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.85  E-value=4e-09  Score=74.20  Aligned_cols=85  Identities=24%  Similarity=0.183  Sum_probs=67.3

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      +|+ |++|+++++.|.+.| ++|++++|++.......           ..++.++.+|+.+.+.+.++++  ++|+||++
T Consensus        11 ~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   76 (118)
T 3ic5_A           11 VGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-----------RMGVATKQVDAKDEAGLAKALG--GFDAVISA   76 (118)
T ss_dssp             ECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-----------TTTCEEEECCTTCHHHHHHHTT--TCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-----------hCCCcEEEecCCCHHHHHHHHc--CCCEEEEC
Confidence            588 999999999999999 99999999876532111           2467889999999999999998  99999999


Q ss_pred             CCCCcccHHHHHHhCC--CCccEE
Q 023110           80 NGREADEVEPILDALP--NLEQFI  101 (287)
Q Consensus        80 a~~~~~~~~~ll~~~~--~~~~~i  101 (287)
                      ++  .....++++++.  ++++|.
T Consensus        77 ~~--~~~~~~~~~~~~~~g~~~~~   98 (118)
T 3ic5_A           77 AP--FFLTPIIAKAAKAAGAHYFD   98 (118)
T ss_dssp             SC--GGGHHHHHHHHHHTTCEEEC
T ss_pred             CC--chhhHHHHHHHHHhCCCEEE
Confidence            96  344577777765  554443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.64  E-value=4.3e-07  Score=81.82  Aligned_cols=200  Identities=14%  Similarity=0.129  Sum_probs=121.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecC-CChHHH-Hhhhhc-CCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR-KDYDFV-KSSLSA-KGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~-~d~~~~-~~~~~~-~~~d~vi   77 (287)
                      |||++-||+++++.|.++|++|++.+|.....  ..     ..+......+..+.+|+ .+.+.+ +.+.+. -++|++|
T Consensus       328 TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~--~~-----~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          328 TGAGAGLGKEYAKWFAKYGAKVVVNDFKDATK--TV-----DEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEECSSCCHH--HH-----HHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             ECcchHHHHHHHHHHHHCCCEEEEEeCccHHH--HH-----HHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            79999999999999999999999988632210  00     11111123456677888 554332 223222 2799999


Q ss_pred             ecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhh
Q 023110           78 DINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (287)
Q Consensus        78 ~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  131 (287)
                      |+||....                    +    ++.++..++  +..++|++||...+-..          +....|..+
T Consensus       401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~----------~~~~~Y~as  470 (604)
T 2et6_A          401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN----------FGQANYSSS  470 (604)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC----------TTBHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC----------CCChhHHHH
Confidence            99997311                    1    333444443  44689999997543111          111224488


Q ss_pred             hHHHHHHh-------hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          132 KLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       132 k~~~E~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      |.....+.       ...++++..|.||. -.+     +.....    ...          .......+|+|.+++.++.
T Consensus       471 Kaal~~lt~~la~El~~~gIrVn~v~PG~-~T~-----m~~~~~----~~~----------~~~~~~pe~vA~~v~~L~s  530 (604)
T 2et6_A          471 KAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETA-----MTLSIM----REQ----------DKNLYHADQVAPLLVYLGT  530 (604)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCC-----C-----------------------CCSSCGGGTHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCc-----cccccC----chh----------hccCCCHHHHHHHHHHHhC
Confidence            98877654       24689999999983 222     111100    000          0123468999999998875


Q ss_pred             CCc-cCCceEEecCCc-----------------ccCHHHHHHHHHHHhCCC
Q 023110          205 NEK-ASRQVFNISGEK-----------------YVTFDGLARACAKAAGFP  237 (287)
Q Consensus       205 ~~~-~~~~~~~i~~~~-----------------~~s~~e~~~~i~~~~g~~  237 (287)
                      ... ..|+.+.+.++.                 ..+..++.+.+.+....+
T Consensus       531 ~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  581 (604)
T 2et6_A          531 DDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFT  581 (604)
T ss_dssp             TTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCS
T ss_pred             CccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhccc
Confidence            432 467788777652                 357788888888876654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.57  E-value=4.1e-07  Score=89.62  Aligned_cols=202  Identities=10%  Similarity=0.040  Sum_probs=118.4

Q ss_pred             CCcccc-hHHHHHHHHHHcCCeEEEEEc-CCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-------C
Q 023110            1 MGGTRF-IGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K   71 (287)
Q Consensus         1 tGatG~-iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-------~   71 (287)
                      |||+|. ||.++++.|+++|++|+++++ +..........+ ...+......+.++.+|+.|.+++.++++.       .
T Consensus       658 TGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL-~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~~~~  736 (1878)
T 2uv9_A          658 TGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGI-YARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTKNGL  736 (1878)
T ss_dssp             ESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHH-HHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSSSSC
T ss_pred             ECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHH-HHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhhccc
Confidence            799998 999999999999999999864 443311100000 000000124578899999999988887752       2


Q ss_pred             --CccEEEecCCCCccc-----------------------HHHHHHh------CC--CCccEEEEecceeeccCCCCCCC
Q 023110           72 --GFDVVYDINGREADE-----------------------VEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHC  118 (287)
Q Consensus        72 --~~d~vi~~a~~~~~~-----------------------~~~ll~~------~~--~~~~~i~~Ss~~v~~~~~~~~~~  118 (287)
                        .+|+|||+||....+                       +..++++      +.  +..+||++||...+..       
T Consensus       737 G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g-------  809 (1878)
T 2uv9_A          737 GWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG-------  809 (1878)
T ss_dssp             CCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS-------
T ss_pred             CCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC-------
Confidence              489999999863211                       1112222      22  2358999999754311       


Q ss_pred             CCCCCCCCcchhhhHHHHHHhh----h---CCCcEEEEecCeee-cCCCCCChhHHHHHHHHcCCCccCCCCCCceeeee
Q 023110          119 ETDTVDPKSRHKGKLNTESVLE----S---KGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       119 e~~~~~~~~~~~~k~~~E~~~~----~---~~~~~~ilR~~~v~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                           ....|..+|..++.+.+    .   .+++++.+.||.+- .+....   ...........++          ...
T Consensus       810 -----g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~---~~~~~~~~~~~pl----------r~~  871 (1878)
T 2uv9_A          810 -----NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA---NNLVAEGVEKLGV----------RTF  871 (1878)
T ss_dssp             -----CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH---HHHTHHHHHTTTC----------CCB
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc---chhhHHHHHhcCC----------CCC
Confidence                 11235589998877642    1   13889999999886 442111   0111111111111          233


Q ss_pred             eHHHHHHHHHHHHcCCc---cCCceEEec--CCcc--cCHHHHHH
Q 023110          191 HVKDLARAFVQVLGNEK---ASRQVFNIS--GEKY--VTFDGLAR  228 (287)
Q Consensus       191 ~~~D~a~~~~~~~~~~~---~~~~~~~i~--~~~~--~s~~e~~~  228 (287)
                      ..+|+|.+++.++....   ..|..+.+.  ++..  ..+.++..
T Consensus       872 sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~  916 (1878)
T 2uv9_A          872 SQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMT  916 (1878)
T ss_dssp             CHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHH
T ss_pred             CHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHH
Confidence            78999999998875432   246666653  4432  34445443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.52  E-value=7.4e-07  Score=80.31  Aligned_cols=201  Identities=11%  Similarity=0.075  Sum_probs=115.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccc-----ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhh----c-
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-----QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----A-   70 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----~-   70 (287)
                      |||++-||+++++.|.++|++|++.+|+.....     +.+... ...+..  .+.+ ..+|+.|.++++++++    . 
T Consensus        14 TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~-~~~i~~--~g~~-~~~d~~d~~~~~~~v~~~~~~~   89 (604)
T 2et6_A           14 TGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVV-VDEIVK--NGGV-AVADYNNVLDGDKIVETAVKNF   89 (604)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHH-HHHHHH--TTCE-EEEECCCTTCHHHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHH-HHHHHh--cCCe-EEEEcCCHHHHHHHHHHHHHHc
Confidence            899999999999999999999999987652100     000000 001111  1222 2357766543333332    2 


Q ss_pred             CCccEEEecCCCCc--------------------cc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           71 KGFDVVYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        71 ~~~d~vi~~a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      -++|++||+||...                    .+    ++.++..++  +..++|++||....-...          .
T Consensus        90 G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~----------~  159 (604)
T 2et6_A           90 GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF----------G  159 (604)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------T
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC----------C
Confidence            26999999999731                    11    233444443  456899999975432111          1


Q ss_pred             CCcchhhhHHHHHHh-------hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          125 PKSRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       125 ~~~~~~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ...|..+|..+..+.       ..+|+++..|.|+ +..     .+.    ...   .+       .........+|+|.
T Consensus       160 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T-----~m~----~~~---~~-------~~~~~~~~pe~vA~  219 (604)
T 2et6_A          160 QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARS-----RMT----ESI---MP-------PPMLEKLGPEKVAP  219 (604)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCC-----HHH----HTT---SC-------HHHHTTCSHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcC-----ccc----ccc---CC-------hhhhccCCHHHHHH
Confidence            122448898877654       2468999999996 211     111    000   00       00111246899999


Q ss_pred             HHHHHHcCCc-cCCceEEecCC------------------cccCHHHHHHHHHHHhC
Q 023110          198 AFVQVLGNEK-ASRQVFNISGE------------------KYVTFDGLARACAKAAG  235 (287)
Q Consensus       198 ~~~~~~~~~~-~~~~~~~i~~~------------------~~~s~~e~~~~i~~~~g  235 (287)
                      +++.++.... ..|+.+.+.++                  ...+..++.+.+.+...
T Consensus       220 ~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  276 (604)
T 2et6_A          220 LVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILD  276 (604)
T ss_dssp             HHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTC
T ss_pred             HHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhc
Confidence            9999886542 25667776654                  23567888888777654

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=98.50  E-value=7.3e-07  Score=75.23  Aligned_cols=82  Identities=11%  Similarity=-0.049  Sum_probs=59.1

Q ss_pred             CCcccchHHHHHHHHHH-cCCeEEEEEcCCccccccCCC-------CChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-
Q 023110            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPG-------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~-~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-   71 (287)
                      |||++-||.++++.|.+ +|.+|++++|+..........       ............+..+.+|++|.+++.++++.. 
T Consensus        53 TGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~  132 (405)
T 3zu3_A           53 IGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIK  132 (405)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             eCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            79999999999999999 999999999876542211100       000111222346788999999998888777532 


Q ss_pred             ----CccEEEecCCC
Q 023110           72 ----GFDVVYDINGR   82 (287)
Q Consensus        72 ----~~d~vi~~a~~   82 (287)
                          ++|++||+||.
T Consensus       133 ~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          133 QDLGQVDQVIYSLAS  147 (405)
T ss_dssp             HHTSCEEEEEECCCC
T ss_pred             HHcCCCCEEEEcCcc
Confidence                69999999876

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.49  E-value=2.7e-07  Score=67.05  Aligned_cols=92  Identities=13%  Similarity=0.107  Sum_probs=65.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d~vi~~   79 (287)
                      +|+ |.+|+.+++.|.+.|++|++++|++.... .+.          ..+...+.+|..+.+.+.++ ++  ++|+||++
T Consensus        12 ~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~-~~~----------~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~   77 (144)
T 2hmt_A           12 IGL-GRFGGSIVKELHRMGHEVLAVDINEEKVN-AYA----------SYATHAVIANATEENELLSLGIR--NFEYVIVA   77 (144)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHH-TTT----------TTCSEEEECCTTCHHHHHTTTGG--GCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH----------HhCCEEEEeCCCCHHHHHhcCCC--CCCEEEEC
Confidence            476 99999999999999999999999865522 222          13456788999998888775 66  89999999


Q ss_pred             CCCCcccHHHHHHhCC--CCccEEEEecc
Q 023110           80 NGREADEVEPILDALP--NLEQFIYCSSA  106 (287)
Q Consensus        80 a~~~~~~~~~ll~~~~--~~~~~i~~Ss~  106 (287)
                      ++........++..++  +..++|..++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~~  106 (144)
T 2hmt_A           78 IGANIQASTLTTLLLKELDIPNIWVKAQN  106 (144)
T ss_dssp             CCSCHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             CCCchHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            8864333333444444  55566655543

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=98.48  E-value=4.5e-07  Score=77.58  Aligned_cols=82  Identities=6%  Similarity=-0.076  Sum_probs=58.8

Q ss_pred             CCcccchHHH--HHHHHHHcCCeEEEEEcCCccccccCC-------CCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-
Q 023110            1 MGGTRFIGVF--LSRLLVKEGHQVTLFTRGKAPIAQQLP-------GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-   70 (287)
Q Consensus         1 tGatG~iG~~--l~~~l~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-   70 (287)
                      |||++-||.+  +++.|.++|++|++++|+.........       .............+..+.+|+.|.+++.++++. 
T Consensus        66 TGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i  145 (418)
T 4eue_A           66 VGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYI  145 (418)
T ss_dssp             ESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            7999999999  999999999999999997654221110       000011122234688999999999888777653 


Q ss_pred             ----CCccEEEecCCC
Q 023110           71 ----KGFDVVYDINGR   82 (287)
Q Consensus        71 ----~~~d~vi~~a~~   82 (287)
                          -++|++||+||.
T Consensus       146 ~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          146 KDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHTTCCEEEEEECCCC
T ss_pred             HHHcCCCCEEEECCcc
Confidence                269999999886

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.44  E-value=3.4e-07  Score=90.35  Aligned_cols=188  Identities=12%  Similarity=0.066  Sum_probs=112.5

Q ss_pred             CCcccc-hHHHHHHHHHHcCCeEEEEE-cCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc--------
Q 023110            1 MGGTRF-IGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------   70 (287)
Q Consensus         1 tGatG~-iG~~l~~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--------   70 (287)
                      |||+|. ||.++++.|+++|++|++++ |+..........+ ..........+.++.+|+.|.+++..+++.        
T Consensus       681 TGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL-~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~~~~  759 (1887)
T 2uv8_A          681 TGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSI-YAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNG  759 (1887)
T ss_dssp             ESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHH-HHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCTTTT
T ss_pred             ECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHH-HHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhcccc
Confidence            799998 99999999999999999985 5544321110000 000000024578899999999988877752        


Q ss_pred             -C--CccEEEecCCCCccc-----------------------HHHHHHhC---C-----CCccEEEEecceeeccCCCCC
Q 023110           71 -K--GFDVVYDINGREADE-----------------------VEPILDAL---P-----NLEQFIYCSSAGVYLKSDLLP  116 (287)
Q Consensus        71 -~--~~d~vi~~a~~~~~~-----------------------~~~ll~~~---~-----~~~~~i~~Ss~~v~~~~~~~~  116 (287)
                       .  ++|++||+||.....                       +..+.+++   .     +..+||++||...+..     
T Consensus       760 G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g-----  834 (1887)
T 2uv8_A          760 GLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-----  834 (1887)
T ss_dssp             SCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS-----
T ss_pred             ccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC-----
Confidence             2  489999999864211                       11233332   1     2258999999754311     


Q ss_pred             CCCCCCCCCCcchhhhHHHHHH-hh----hC--CCcEEEEecCeeec-CCCC-CChhHHHHHHHHcCCCccCCCCCCcee
Q 023110          117 HCETDTVDPKSRHKGKLNTESV-LE----SK--GVNWTSLRPVYIYG-PLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVT  187 (287)
Q Consensus       117 ~~e~~~~~~~~~~~~k~~~E~~-~~----~~--~~~~~ilR~~~v~g-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (287)
                             ....|..+|...+.+ .+    +.  .+++..+.||.+.+ +... .....    .....  .+.        
T Consensus       835 -------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~----~~~~~--~pl--------  893 (1887)
T 2uv8_A          835 -------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIA----EGIEK--MGV--------  893 (1887)
T ss_dssp             -------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTH----HHHHT--TSC--------
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHH----HHHHh--cCC--------
Confidence                   112345999988876 21    11  28899999999984 3111 01111    11111  110        


Q ss_pred             eeeeHHHHHHHHHHHHcCC-c--cCCceEEe
Q 023110          188 QLGHVKDLARAFVQVLGNE-K--ASRQVFNI  215 (287)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~-~--~~~~~~~i  215 (287)
                      -+...+|+|.+++.++... .  ..|..+.+
T Consensus       894 r~~sPEEVA~avlfLaSd~~as~iTGq~I~V  924 (1887)
T 2uv8_A          894 RTFSQKEMAFNLLGLLTPEVVELCQKSPVMA  924 (1887)
T ss_dssp             CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEE
T ss_pred             CCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence            2347999999999888654 1  14566665

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=98.42  E-value=7.4e-07  Score=75.85  Aligned_cols=150  Identities=13%  Similarity=-0.027  Sum_probs=95.9

Q ss_pred             CCcccchHHHHHHHHHH-cCCeEEEEEcCCccccccCCC--C-----ChhhhhhhcCCeEEEEecCCChHHHHhhhhc--
Q 023110            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPG--E-----SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~-~g~~V~~~~r~~~~~~~~~~~--~-----~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--   70 (287)
                      |||++-||.++++.|.+ .|++|++++|+..........  +     ...........+..+.+|++|++++.++++.  
T Consensus        67 TGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~  146 (422)
T 3s8m_A           67 IGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVIELIK  146 (422)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             ECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            79999999999999999 999999999986552211100  0     0011122234678899999999887766642  


Q ss_pred             ----CCccEEEecCCCC-----------------cc-------------------------------------cH-HHHH
Q 023110           71 ----KGFDVVYDINGRE-----------------AD-------------------------------------EV-EPIL   91 (287)
Q Consensus        71 ----~~~d~vi~~a~~~-----------------~~-------------------------------------~~-~~ll   91 (287)
                          -++|++||+||..                 ..                                     +. ..++
T Consensus       147 ~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~  226 (422)
T 3s8m_A          147 TEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWI  226 (422)
T ss_dssp             HHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHH
T ss_pred             HHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhHHHHHH
Confidence                2689999998751                 00                                     00 0222


Q ss_pred             HhC-----C-CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCC
Q 023110           92 DAL-----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPL  158 (287)
Q Consensus        92 ~~~-----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~  158 (287)
                      +++     . +..++|++||....-..+.        .....|..+|..++.+.+       ..|+++..+.||.+-.+.
T Consensus       227 ~a~~~~~m~~~gG~IVniSSi~g~~~~p~--------~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~  298 (422)
T 3s8m_A          227 DALEGAGVLADGARSVAFSYIGTEITWPI--------YWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQA  298 (422)
T ss_dssp             HHHHHTTCEEEEEEEEEEEECCCGGGHHH--------HTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             HHHHHHHHhhCCCEEEEEeCchhhccCCC--------ccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChh
Confidence            221     1 2358999999764211000        000123488998876653       468999999999997764

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.42  E-value=1.9e-07  Score=89.67  Aligned_cols=186  Identities=12%  Similarity=0.089  Sum_probs=110.6

Q ss_pred             CCcccc-hHHHHHHHHHHcCCeEEEEE-cCCccccc---cCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----
Q 023110            1 MGGTRF-IGVFLSRLLVKEGHQVTLFT-RGKAPIAQ---QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----   70 (287)
Q Consensus         1 tGatG~-iG~~l~~~l~~~g~~V~~~~-r~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----   70 (287)
                      |||+|. ||+++++.|+++|++|++++ |+.....+   .+...    .......+.++.+|+.|.+++.++++.     
T Consensus       482 TGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ae----l~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~  557 (1688)
T 2pff_A          482 TGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAK----YGAKGSTLIVVPFNQGSKQDVEALIEFIYDTE  557 (1688)
T ss_dssp             CSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTT----TCCTTCEEEEEECCSSSTTHHHHHHHHHHSCT
T ss_pred             ECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHH----hhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhc
Confidence            799998 99999999999999999984 55433211   11100    000023578899999999888877752     


Q ss_pred             ----C--CccEEEecCCCCccc-----------------------HHHHHHhC------C--CCccEEEEecceeeccCC
Q 023110           71 ----K--GFDVVYDINGREADE-----------------------VEPILDAL------P--NLEQFIYCSSAGVYLKSD  113 (287)
Q Consensus        71 ----~--~~d~vi~~a~~~~~~-----------------------~~~ll~~~------~--~~~~~i~~Ss~~v~~~~~  113 (287)
                          .  ++|++||+||.....                       +..+++++      .  +..+||++||......  
T Consensus       558 ~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G--  635 (1688)
T 2pff_A          558 KNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--  635 (1688)
T ss_dssp             TSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS--
T ss_pred             cccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC--
Confidence                2  489999999863111                       11222332      2  2258999998654211  


Q ss_pred             CCCCCCCCCCCCCcchhhhHHHHHHh-h----h--CCCcEEEEecCeeec-CCCCCChhHHHHHHHHcCCCccCCCCCCc
Q 023110          114 LLPHCETDTVDPKSRHKGKLNTESVL-E----S--KGVNWTSLRPVYIYG-PLNYNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (287)
Q Consensus       114 ~~~~~e~~~~~~~~~~~~k~~~E~~~-~----~--~~~~~~ilR~~~v~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (287)
                                ....|..+|...+.+. +    +  ..+++..+.||.+.+ +.....   .    . .....    .. .
T Consensus       636 ----------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~---e----~-~~~~l----~~-i  692 (1688)
T 2pff_A          636 ----------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN---N----I-IAEGI----EK-M  692 (1688)
T ss_dssp             ----------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT---T----T-CSTTT----SS-S
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc---h----H-HHHHH----Hh-C
Confidence                      1123459999988872 1    1  127778888988874 211100   0    0 00000    00 0


Q ss_pred             eeeeeeHHHHHHHHHHHHcCCc---cCCceEEe
Q 023110          186 VTQLGHVKDLARAFVQVLGNEK---ASRQVFNI  215 (287)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~~---~~~~~~~i  215 (287)
                      .......+|+|++++.++....   ..|+.+.+
T Consensus       693 plR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~V  725 (1688)
T 2pff_A          693 GVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMA  725 (1688)
T ss_dssp             SCCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCC
T ss_pred             CCCCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence            1123468999999999886551   14666655

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.25  E-value=1.6e-06  Score=62.85  Aligned_cols=85  Identities=26%  Similarity=0.234  Sum_probs=60.5

Q ss_pred             ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCccEEEecCCC
Q 023110            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDINGR   82 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d~vi~~a~~   82 (287)
                      .|.+|+++++.|.++|++|+++++++..... +.          ..++.++.+|..+++.+.++ ++  ++|+||.+.+ 
T Consensus        14 ~G~iG~~la~~L~~~g~~V~~id~~~~~~~~-~~----------~~~~~~~~gd~~~~~~l~~~~~~--~~d~vi~~~~-   79 (141)
T 3llv_A           14 SEAAGVGLVRELTAAGKKVLAVDKSKEKIEL-LE----------DEGFDAVIADPTDESFYRSLDLE--GVSAVLITGS-   79 (141)
T ss_dssp             CSHHHHHHHHHHHHTTCCEEEEESCHHHHHH-HH----------HTTCEEEECCTTCHHHHHHSCCT--TCSEEEECCS-
T ss_pred             CCHHHHHHHHHHHHCCCeEEEEECCHHHHHH-HH----------HCCCcEEECCCCCHHHHHhCCcc--cCCEEEEecC-
Confidence            4999999999999999999999998765221 11          24678899999999988876 33  7999999887 


Q ss_pred             CcccHHHHHHhCC--CCccEEE
Q 023110           83 EADEVEPILDALP--NLEQFIY  102 (287)
Q Consensus        83 ~~~~~~~ll~~~~--~~~~~i~  102 (287)
                      +......++..++  +..++|.
T Consensus        80 ~~~~n~~~~~~a~~~~~~~iia  101 (141)
T 3llv_A           80 DDEFNLKILKALRSVSDVYAIV  101 (141)
T ss_dssp             CHHHHHHHHHHHHHHCCCCEEE
T ss_pred             CHHHHHHHHHHHHHhCCceEEE
Confidence            3222223333333  5445543

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.17  E-value=4.8e-07  Score=74.02  Aligned_cols=75  Identities=19%  Similarity=0.203  Sum_probs=57.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+|.+|+++++.|.+.|++|++++|+.....+...     .+.. ..++.++.+|+.+.+++.++++  .+|+|||++
T Consensus       125 tGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~-----~~~~-~~~~~~~~~D~~~~~~~~~~~~--~~DvlVn~a  196 (287)
T 1lu9_A          125 LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAAD-----SVNK-RFKVNVTAAETADDASRAEAVK--GAHFVFTAG  196 (287)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----HHHH-HHTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHH-----HHHh-cCCcEEEEecCCCHHHHHHHHH--hCCEEEECC
Confidence            6999999999999999999999999998654221110     1111 1246778899999999999998  799999999


Q ss_pred             CCC
Q 023110           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      +..
T Consensus       197 g~g  199 (287)
T 1lu9_A          197 AIG  199 (287)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            753

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.09  E-value=4.1e-06  Score=86.40  Aligned_cols=142  Identities=18%  Similarity=0.160  Sum_probs=93.8

Q ss_pred             CCcccchHHHHHHHHHHcCCe-EEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~----~~~d~   75 (287)
                      |||+|-||+++++.|.++|++ |++++|+......... . ...+......+.++.+|+.|.+++.++++.    ..+|+
T Consensus      1890 TGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~-~-~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g~id~ 1967 (2512)
T 2vz8_A         1890 TGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQAR-Q-VREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPVGG 1967 (2512)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHH-H-HHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHSCEEE
T ss_pred             ECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHH-H-HHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999997 7778888654210000 0 011111134578899999999988877753    26899


Q ss_pred             EEecCCCC--------------------cccHHHHHH----hCCCCccEEEEecceeeccCCCCCCCCCCCCCCCcchhh
Q 023110           76 VYDINGRE--------------------ADEVEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (287)
Q Consensus        76 vi~~a~~~--------------------~~~~~~ll~----~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  131 (287)
                      |||+||..                    +.++.++.+    .+....+||++||....-...          ....|..+
T Consensus      1968 lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~----------g~~~Y~aa 2037 (2512)
T 2vz8_A         1968 VFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNA----------GQANYGFA 2037 (2512)
T ss_dssp             EEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCT----------TCHHHHHH
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCC----------CcHHHHHH
Confidence            99999872                    223444433    333457999999976532111          11234499


Q ss_pred             hHHHHHHhh---hCCCcEEEEecCee
Q 023110          132 KLNTESVLE---SKGVNWTSLRPVYI  154 (287)
Q Consensus       132 k~~~E~~~~---~~~~~~~ilR~~~v  154 (287)
                      |...+.+.+   ..|++...+-.+.+
T Consensus      2038 Kaal~~l~~~rr~~Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2038 NSAMERICEKRRHDGLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHHHHTTSCCCEEEECCB
T ss_pred             HHHHHHHHHHHHHCCCcEEEEEccCc
Confidence            998887764   56888777777654

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.05  E-value=5.8e-06  Score=59.58  Aligned_cols=88  Identities=17%  Similarity=0.207  Sum_probs=59.7

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCccEEEecC
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN   80 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d~vi~~a   80 (287)
                      |+ |++|+.+++.|.+.|++|++++|++.... .+.        . ..++..+.+|..+.+.+.+. ++  ++|+||++.
T Consensus        11 G~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~-~~~--------~-~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~~   77 (140)
T 1lss_A           11 GI-GRVGYTLAKSLSEKGHDIVLIDIDKDICK-KAS--------A-EIDALVINGDCTKIKTLEDAGIE--DADMYIAVT   77 (140)
T ss_dssp             CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHH--------H-HCSSEEEESCTTSHHHHHHTTTT--TCSEEEECC
T ss_pred             CC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH-HHH--------H-hcCcEEEEcCCCCHHHHHHcCcc--cCCEEEEee
Confidence            54 99999999999999999999999765421 110        0 12567788999888877654 55  899999997


Q ss_pred             CCCcccHHHHHHhCC--CCccEEEE
Q 023110           81 GREADEVEPILDALP--NLEQFIYC  103 (287)
Q Consensus        81 ~~~~~~~~~ll~~~~--~~~~~i~~  103 (287)
                      +... ....+.+.++  +..++|..
T Consensus        78 ~~~~-~~~~~~~~~~~~~~~~ii~~  101 (140)
T 1lss_A           78 GKEE-VNLMSSLLAKSYGINKTIAR  101 (140)
T ss_dssp             SCHH-HHHHHHHHHHHTTCCCEEEE
T ss_pred             CCch-HHHHHHHHHHHcCCCEEEEE
Confidence            6431 1122333433  55576643

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.05  E-value=7.3e-06  Score=71.14  Aligned_cols=71  Identities=17%  Similarity=0.192  Sum_probs=56.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +| +|++|+++++.|.+.|++|++.+|+..........         ..++..+.+|+.|.+++.++++  ++|+|||++
T Consensus         9 iG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~---------~~~~~~~~~Dv~d~~~l~~~l~--~~DvVIn~a   76 (450)
T 1ff9_A            9 LG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG---------VQHSTPISLDVNDDAALDAEVA--KHDLVISLI   76 (450)
T ss_dssp             EC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTT---------CTTEEEEECCTTCHHHHHHHHT--TSSEEEECC
T ss_pred             EC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHh---------cCCceEEEeecCCHHHHHHHHc--CCcEEEECC
Confidence            46 79999999999999999999999987653222111         1347788999999999999998  899999999


Q ss_pred             CCC
Q 023110           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      +..
T Consensus        77 ~~~   79 (450)
T 1ff9_A           77 PYT   79 (450)
T ss_dssp             C--
T ss_pred             ccc
Confidence            863

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.00  E-value=1.2e-05  Score=66.76  Aligned_cols=95  Identities=16%  Similarity=0.254  Sum_probs=62.4

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      +||+|++|++++..|+.+|  ++|+++++++.. ....      .+........ +.+ +.+..++.++++  ++|+|||
T Consensus        14 iGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~-~~~~------dL~~~~~~~~-v~~-~~~t~d~~~al~--gaDvVi~   82 (326)
T 1smk_A           14 LGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAP-GVTA------DISHMDTGAV-VRG-FLGQQQLEAALT--GMDLIIV   82 (326)
T ss_dssp             ETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHH-HHHH------HHHTSCSSCE-EEE-EESHHHHHHHHT--TCSEEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcH-hHHH------Hhhcccccce-EEE-EeCCCCHHHHcC--CCCEEEE
Confidence            5899999999999999988  899999877641 1000      0000001111 122 234566778888  9999999


Q ss_pred             cCCCCc--------------ccHHHHHHhCC--CCccEEEEecc
Q 023110           79 INGREA--------------DEVEPILDALP--NLEQFIYCSSA  106 (287)
Q Consensus        79 ~a~~~~--------------~~~~~ll~~~~--~~~~~i~~Ss~  106 (287)
                      +++...              ..++++++++.  +.+.+|+++|.
T Consensus        83 ~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN  126 (326)
T 1smk_A           83 PAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN  126 (326)
T ss_dssp             CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             cCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            998642              34667777766  56677777764

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.90  E-value=3.7e-06  Score=70.04  Aligned_cols=94  Identities=10%  Similarity=0.011  Sum_probs=60.9

Q ss_pred             CCcccchHHHHHHHHHHcCC-------eEEEEEcC----CccccccCCCCChhhhhhhcCC-eEEEEecCCChHHHHhhh
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRG----KAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKDYDFVKSSL   68 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~-~~~i~~D~~d~~~~~~~~   68 (287)
                      |||+|++|++++..|+..|+       +|++++++    .......        ...+... ..+ ..|+....++.+++
T Consensus        11 iGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~--------~~dl~~~~~~~-~~~i~~~~~~~~al   81 (329)
T 1b8p_A           11 TGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGV--------MMEIDDCAFPL-LAGMTAHADPMTAF   81 (329)
T ss_dssp             SSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHH--------HHHHHTTTCTT-EEEEEEESSHHHHT
T ss_pred             ECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhh--------HHHHhhhcccc-cCcEEEecCcHHHh
Confidence            69999999999999999885       89998887    3211100        0000011 111 23555555677888


Q ss_pred             hcCCccEEEecCCCCc--------------ccHHHHHHhCC--C-Cc-cEEEEec
Q 023110           69 SAKGFDVVYDINGREA--------------DEVEPILDALP--N-LE-QFIYCSS  105 (287)
Q Consensus        69 ~~~~~d~vi~~a~~~~--------------~~~~~ll~~~~--~-~~-~~i~~Ss  105 (287)
                      +  ++|+|||+++...              ..+.++++++.  . .+ +||++|.
T Consensus        82 ~--~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN  134 (329)
T 1b8p_A           82 K--DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN  134 (329)
T ss_dssp             T--TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             C--CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence            8  9999999998742              23556666665  3 33 8888886

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.88  E-value=0.00013  Score=53.64  Aligned_cols=67  Identities=16%  Similarity=0.360  Sum_probs=52.4

Q ss_pred             ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCccEEEecCCC
Q 023110            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDINGR   82 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d~vi~~a~~   82 (287)
                      .|.+|+.+++.|.+.|++|++++|++.... .+..         ..++..+.+|..+.+.+.++ ++  ++|+||.+.+.
T Consensus        27 ~G~iG~~la~~L~~~g~~V~vid~~~~~~~-~~~~---------~~g~~~~~~d~~~~~~l~~~~~~--~ad~Vi~~~~~   94 (155)
T 2g1u_A           27 CGRLGSLIANLASSSGHSVVVVDKNEYAFH-RLNS---------EFSGFTVVGDAAEFETLKECGME--KADMVFAFTND   94 (155)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESCGGGGG-GSCT---------TCCSEEEESCTTSHHHHHTTTGG--GCSEEEECSSC
T ss_pred             CCHHHHHHHHHHHhCCCeEEEEECCHHHHH-HHHh---------cCCCcEEEecCCCHHHHHHcCcc--cCCEEEEEeCC
Confidence            599999999999999999999999876632 2220         13566788998888777765 55  89999999874

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.84  E-value=1.8e-05  Score=67.87  Aligned_cols=95  Identities=12%  Similarity=0.058  Sum_probs=67.0

Q ss_pred             CCcccchHHHHHHHHHHcC---CeEEEEEcCCccccccCCCCChhhhhh-hcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      +|| |++|+.+++.|.+.|   .+|++.+|+.........     .+.. ...++..+.+|+.|.+++.++++..++|+|
T Consensus         7 iGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~-----~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV   80 (405)
T 4ina_A            7 IGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQ-----SIKAKGYGEIDITTVDADSIEELVALINEVKPQIV   80 (405)
T ss_dssp             ECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHH-----HHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             ECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHH-----HhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence            477 999999999999998   389999998765321110     0000 013588999999999999999984459999


Q ss_pred             EecCCCCcccHHHHHHhCC-CCccEEEE
Q 023110           77 YDINGREADEVEPILDALP-NLEQFIYC  103 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~-~~~~~i~~  103 (287)
                      ||+++...  ...++++|. ..++++-+
T Consensus        81 in~ag~~~--~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           81 LNIALPYQ--DLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             EECSCGGG--HHHHHHHHHHHTCCEEES
T ss_pred             EECCCccc--ChHHHHHHHHhCCCEEEe
Confidence            99998532  456666654 33455543

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.79  E-value=2.4e-05  Score=66.18  Aligned_cols=86  Identities=15%  Similarity=0.096  Sum_probs=65.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|| |++|+.+++.|.+ .++|.+.+|+...... +           ...+..+..|+.|.+++.++++  ++|+||+++
T Consensus        22 lGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~-~-----------~~~~~~~~~d~~d~~~l~~~~~--~~DvVi~~~   85 (365)
T 3abi_A           22 LGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEK-V-----------KEFATPLKVDASNFDKLVEVMK--EFELVIGAL   85 (365)
T ss_dssp             ECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHH-H-----------TTTSEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHH-H-----------hccCCcEEEecCCHHHHHHHHh--CCCEEEEec
Confidence            377 9999999998865 5899999988665321 1           2466778999999999999999  899999998


Q ss_pred             CCCcccHHHHHHhCC-CCccEEEEe
Q 023110           81 GREADEVEPILDALP-NLEQFIYCS  104 (287)
Q Consensus        81 ~~~~~~~~~ll~~~~-~~~~~i~~S  104 (287)
                      +..  ....++++|- ..++++=+|
T Consensus        86 p~~--~~~~v~~~~~~~g~~yvD~s  108 (365)
T 3abi_A           86 PGF--LGFKSIKAAIKSKVDMVDVS  108 (365)
T ss_dssp             CGG--GHHHHHHHHHHHTCEEEECC
T ss_pred             CCc--ccchHHHHHHhcCcceEeee
Confidence            754  3456777765 445776555

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.79  E-value=4.7e-05  Score=55.87  Aligned_cols=71  Identities=15%  Similarity=0.249  Sum_probs=54.1

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCccEEEecC
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN   80 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d~vi~~a   80 (287)
                      | .|.+|+.+++.|.+.|++|+++++++....+.+.       .....++.++.+|..+++.+.++ ++  ++|+||.+.
T Consensus        10 G-~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~~~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~   79 (153)
T 1id1_A           10 G-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLE-------QRLGDNADVIPGDSNDSSVLKKAGID--RCRAILALS   79 (153)
T ss_dssp             C-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHH-------HHHCTTCEEEESCTTSHHHHHHHTTT--TCSEEEECS
T ss_pred             C-CCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHH-------HhhcCCCeEEEcCCCCHHHHHHcChh--hCCEEEEec
Confidence            5 5999999999999999999999998532111110       00124789999999999988876 77  899999887


Q ss_pred             CC
Q 023110           81 GR   82 (287)
Q Consensus        81 ~~   82 (287)
                      +.
T Consensus        80 ~~   81 (153)
T 1id1_A           80 DN   81 (153)
T ss_dssp             SC
T ss_pred             CC
Confidence            64

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.68  E-value=3.3e-05  Score=67.21  Aligned_cols=70  Identities=20%  Similarity=0.138  Sum_probs=55.7

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      +|+ |++|+++++.|.+. |++|++.+|+.++......          ..++..+.+|+.|.+++.++++  ++|+|||+
T Consensus        29 iGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~----------~~~~~~~~~D~~d~~~l~~~l~--~~DvVIn~   95 (467)
T 2axq_A           29 LGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAK----------PSGSKAISLDVTDDSALDKVLA--DNDVVISL   95 (467)
T ss_dssp             ECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHG----------GGTCEEEECCTTCHHHHHHHHH--TSSEEEEC
T ss_pred             ECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHH----------hcCCcEEEEecCCHHHHHHHHc--CCCEEEEC
Confidence            476 99999999999998 7899999998765321111          1246778899999989999998  89999999


Q ss_pred             CCCC
Q 023110           80 NGRE   83 (287)
Q Consensus        80 a~~~   83 (287)
                      ++..
T Consensus        96 tp~~   99 (467)
T 2axq_A           96 IPYT   99 (467)
T ss_dssp             SCGG
T ss_pred             Cchh
Confidence            8763

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.65  E-value=6.1e-05  Score=54.37  Aligned_cols=68  Identities=10%  Similarity=0.164  Sum_probs=54.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d~vi~~a~   81 (287)
                      |.|.+|+.+++.|.+.|++|+++++++..... +.          ..++..+.+|..+++.+.++ ++  ++|+||-+.+
T Consensus        14 G~G~~G~~la~~L~~~g~~v~vid~~~~~~~~-~~----------~~g~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~   80 (140)
T 3fwz_A           14 GYGRVGSLLGEKLLASDIPLVVIETSRTRVDE-LR----------ERGVRAVLGNAANEEIMQLAHLE--CAKWLILTIP   80 (140)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESCHHHHHH-HH----------HTTCEEEESCTTSHHHHHHTTGG--GCSEEEECCS
T ss_pred             CcCHHHHHHHHHHHHCCCCEEEEECCHHHHHH-HH----------HcCCCEEECCCCCHHHHHhcCcc--cCCEEEEECC
Confidence            45999999999999999999999999776321 11          25788999999999888765 45  7999998876


Q ss_pred             CC
Q 023110           82 RE   83 (287)
Q Consensus        82 ~~   83 (287)
                      ..
T Consensus        81 ~~   82 (140)
T 3fwz_A           81 NG   82 (140)
T ss_dssp             CH
T ss_pred             Ch
Confidence            43

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.64  E-value=1.4e-05  Score=66.04  Aligned_cols=99  Identities=18%  Similarity=0.114  Sum_probs=59.4

Q ss_pred             CCcccchHHHHHHHHHHcCC--eEEEEEc--CCccccccCCCCChhhhhhhc-CCeEEEEecCCChHHHHhhhhcCCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTR--GKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAKGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~--~V~~~~r--~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~D~~d~~~~~~~~~~~~~d~   75 (287)
                      |||+|++|++++..|+..|.  ++..+++  +.........++  ....... ..+++...+    +++.++++  ++|+
T Consensus         6 ~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl--~~~~~~~~~~~~i~~~~----d~l~~al~--gaD~   77 (313)
T 1hye_A            6 IGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDI--YDALAGTRSDANIYVES----DENLRIID--ESDV   77 (313)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHH--HHHHTTSCCCCEEEEEE----TTCGGGGT--TCSE
T ss_pred             ECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHH--HHhHHhcCCCeEEEeCC----cchHHHhC--CCCE
Confidence            69999999999999998874  6777777  432110000000  0000001 122332211    22456677  9999


Q ss_pred             EEecCCCC--------------cccHHHHHHhCC--CCccEEEEeccee
Q 023110           76 VYDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGV  108 (287)
Q Consensus        76 vi~~a~~~--------------~~~~~~ll~~~~--~~~~~i~~Ss~~v  108 (287)
                      |||+|+..              +..++++++++.  + +.+|+++|.-+
T Consensus        78 Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv  125 (313)
T 1hye_A           78 VIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV  125 (313)
T ss_dssp             EEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH
T ss_pred             EEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH
Confidence            99999864              234667888876  7 77888887543

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=97.57  E-value=0.0002  Score=55.88  Aligned_cols=64  Identities=14%  Similarity=0.208  Sum_probs=45.0

Q ss_pred             ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHH----HhhhhcCCccEEEec
Q 023110            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV----KSSLSAKGFDVVYDI   79 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~----~~~~~~~~~d~vi~~   79 (287)
                      ||.+|.++++.|..+|++|+.++|..... ...           ..+++.+  |+...+++    .+.+.  ++|++||+
T Consensus        28 SG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-~~~-----------~~~~~~~--~v~s~~em~~~v~~~~~--~~Dili~a   91 (232)
T 2gk4_A           28 TGHLGKIITETLLSAGYEVCLITTKRALK-PEP-----------HPNLSIR--EITNTKDLLIEMQERVQ--DYQVLIHS   91 (232)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEECTTSCC-CCC-----------CTTEEEE--ECCSHHHHHHHHHHHGG--GCSEEEEC
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCcccc-ccC-----------CCCeEEE--EHhHHHHHHHHHHHhcC--CCCEEEEc
Confidence            99999999999999999999999976431 111           1345554  44444333    33344  79999999


Q ss_pred             CCCC
Q 023110           80 NGRE   83 (287)
Q Consensus        80 a~~~   83 (287)
                      |++.
T Consensus        92 AAvs   95 (232)
T 2gk4_A           92 MAVS   95 (232)
T ss_dssp             SBCC
T ss_pred             Cccc
Confidence            9874

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.56  E-value=6.4e-05  Score=57.64  Aligned_cols=93  Identities=17%  Similarity=0.167  Sum_probs=61.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh---hhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS---LSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~---~~~~~~d~vi   77 (287)
                      +||+|.+|..+++.+...|.+|++++|++.... ...+          .+... ..|..+.+....+   ....++|+||
T Consensus        45 ~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~-~~~~----------~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi  112 (198)
T 1pqw_A           45 HSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE-MLSR----------LGVEY-VGDSRSVDFADEILELTDGYGVDVVL  112 (198)
T ss_dssp             TTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHT----------TCCSE-EEETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred             eeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHH----------cCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEE
Confidence            689999999999999999999999999865421 1110          12222 2466554433333   3223699999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEecce
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~  107 (287)
                      ++++.  ......++.++...+++.+++..
T Consensus       113 ~~~g~--~~~~~~~~~l~~~G~~v~~g~~~  140 (198)
T 1pqw_A          113 NSLAG--EAIQRGVQILAPGGRFIELGKKD  140 (198)
T ss_dssp             ECCCT--HHHHHHHHTEEEEEEEEECSCGG
T ss_pred             ECCch--HHHHHHHHHhccCCEEEEEcCCC
Confidence            99873  44556667776445888777643

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.51  E-value=4.1e-05  Score=62.94  Aligned_cols=96  Identities=17%  Similarity=0.141  Sum_probs=57.5

Q ss_pred             CCcccchHHHHHHHHHHcCC--eEEEEEc--CCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTR--GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~--~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      +||+|++|++++..|+..|.  ++..+++  +.........++. .... ....+++.. +  +    .+.++  ++|+|
T Consensus         6 iGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~-~~~~-~~~~~~v~~-~--~----~~a~~--~aDvV   74 (303)
T 1o6z_A            6 VGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTN-HGIA-YDSNTRVRQ-G--G----YEDTA--GSDVV   74 (303)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHH-HHHT-TTCCCEEEE-C--C----GGGGT--TCSEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHH-HHHh-hCCCcEEEe-C--C----HHHhC--CCCEE
Confidence            68999999999999998875  6777777  4322110000000 0000 112334333 2  2    34466  99999


Q ss_pred             EecCCCCc--------------ccHHHHHHhCC--CCccEEEEecce
Q 023110           77 YDINGREA--------------DEVEPILDALP--NLEQFIYCSSAG  107 (287)
Q Consensus        77 i~~a~~~~--------------~~~~~ll~~~~--~~~~~i~~Ss~~  107 (287)
                      ||+++...              ..++++++++.  +.+.+|+++|.-
T Consensus        75 i~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNP  121 (303)
T 1o6z_A           75 VITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNP  121 (303)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSS
T ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCCh
Confidence            99998742              34667777765  556777777643

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.48  E-value=0.0001  Score=57.51  Aligned_cols=69  Identities=17%  Similarity=0.279  Sum_probs=54.6

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCccEEEecC
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN   80 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d~vi~~a   80 (287)
                      | .|.+|+++++.|.+.|++|+++++++........          ..++.++.+|..+.+.+.++ ++  ++|+||-+.
T Consensus         7 G-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~----------~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~   73 (218)
T 3l4b_C            7 G-GETTAYYLARSMLSRKYGVVIINKDRELCEEFAK----------KLKATIIHGDGSHKEILRDAEVS--KNDVVVILT   73 (218)
T ss_dssp             C-CHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----------HSSSEEEESCTTSHHHHHHHTCC--TTCEEEECC
T ss_pred             C-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----------HcCCeEEEcCCCCHHHHHhcCcc--cCCEEEEec
Confidence            5 4999999999999999999999998765321110          23678999999999988876 55  899999887


Q ss_pred             CCC
Q 023110           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      +..
T Consensus        74 ~~d   76 (218)
T 3l4b_C           74 PRD   76 (218)
T ss_dssp             SCH
T ss_pred             CCc
Confidence            643

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.45  E-value=8.3e-05  Score=56.25  Aligned_cols=79  Identities=19%  Similarity=0.090  Sum_probs=57.8

Q ss_pred             cccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh--hhcCCccEEEec
Q 023110            3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS--LSAKGFDVVYDI   79 (287)
Q Consensus         3 atG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~--~~~~~~d~vi~~   79 (287)
                      |.|.+|+.+++.|.+. |++|+++++++..... +.          ..++..+.+|..+.+.+.++  ++  ++|+||.+
T Consensus        46 G~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~-~~----------~~g~~~~~gd~~~~~~l~~~~~~~--~ad~vi~~  112 (183)
T 3c85_A           46 GMGRIGTGAYDELRARYGKISLGIEIREEAAQQ-HR----------SEGRNVISGDATDPDFWERILDTG--HVKLVLLA  112 (183)
T ss_dssp             CCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHH-HH----------HTTCCEEECCTTCHHHHHTBCSCC--CCCEEEEC
T ss_pred             CCCHHHHHHHHHHHhccCCeEEEEECCHHHHHH-HH----------HCCCCEEEcCCCCHHHHHhccCCC--CCCEEEEe
Confidence            3699999999999999 9999999998765321 11          24677889999998888776  66  89999988


Q ss_pred             CCCCcccHHHHHHhCC
Q 023110           80 NGREADEVEPILDALP   95 (287)
Q Consensus        80 a~~~~~~~~~ll~~~~   95 (287)
                      .+. ......++..++
T Consensus       113 ~~~-~~~~~~~~~~~~  127 (183)
T 3c85_A          113 MPH-HQGNQTALEQLQ  127 (183)
T ss_dssp             CSS-HHHHHHHHHHHH
T ss_pred             CCC-hHHHHHHHHHHH
Confidence            753 223333444443

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.32  E-value=0.00036  Score=54.30  Aligned_cols=64  Identities=11%  Similarity=0.100  Sum_probs=45.5

Q ss_pred             ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc--CCccEEEecCC
Q 023110            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVYDING   81 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~~~d~vi~~a~   81 (287)
                      ||.+|.++++.|.++|++|+.+++...- .  .           ..+++  ..|+.+.+++.+.+.+  .++|++||+||
T Consensus        33 Sg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~--~-----------~~g~~--~~dv~~~~~~~~~v~~~~~~~Dili~~Aa   96 (226)
T 1u7z_A           33 SGKMGFAIAAAAARRGANVTLVSGPVSL-P--T-----------PPFVK--RVDVMTALEMEAAVNASVQQQNIFIGCAA   96 (226)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEECSCCC-C--C-----------CTTEE--EEECCSHHHHHHHHHHHGGGCSEEEECCB
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEECCccc-c--c-----------CCCCe--EEccCcHHHHHHHHHHhcCCCCEEEECCc
Confidence            7999999999999999999999886521 1  1           12333  4677776555443321  16999999999


Q ss_pred             CC
Q 023110           82 RE   83 (287)
Q Consensus        82 ~~   83 (287)
                      +.
T Consensus        97 v~   98 (226)
T 1u7z_A           97 VA   98 (226)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.27  E-value=0.00019  Score=60.72  Aligned_cols=92  Identities=13%  Similarity=0.108  Sum_probs=63.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|+ |.+|+.+++.|...|++|++++|++..... +.        + ..+.. +..|..+.+.+.+.++  ++|+||+++
T Consensus       172 iGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~-~~--------~-~~g~~-~~~~~~~~~~l~~~~~--~~DvVi~~~  237 (369)
T 2eez_A          172 LGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQY-LD--------D-VFGGR-VITLTATEANIKKSVQ--HADLLIGAV  237 (369)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HH--------H-HTTTS-EEEEECCHHHHHHHHH--HCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH-HH--------H-hcCce-EEEecCCHHHHHHHHh--CCCEEEECC
Confidence            477 999999999999999999999998755211 10        0 01111 4567777888888888  899999998


Q ss_pred             CCCcc-----cHHHHHHhCCCCccEEEEecc
Q 023110           81 GREAD-----EVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        81 ~~~~~-----~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                      +....     -....++.++....+|.+|+.
T Consensus       238 g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~  268 (369)
T 2eez_A          238 LVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD  268 (369)
T ss_dssp             C-------CCSCHHHHTTSCTTCEEEECC--
T ss_pred             CCCccccchhHHHHHHHhhcCCCEEEEEecC
Confidence            85431     145667777755678888864

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.16  E-value=0.00071  Score=56.13  Aligned_cols=91  Identities=16%  Similarity=0.146  Sum_probs=60.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHh---hhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS---SLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~---~~~~~~~d~vi   77 (287)
                      +||+|.+|..+++.+...|++|++++|++.... .+.        +  .+... ..|..+.+....   .....++|+||
T Consensus       147 ~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~-~~~--------~--~g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi  214 (327)
T 1qor_A          147 HAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ-SAL--------K--AGAWQ-VINYREEDLVERLKEITGGKKVRVVY  214 (327)
T ss_dssp             SSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHH--------H--HTCSE-EEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH--------H--cCCCE-EEECCCccHHHHHHHHhCCCCceEEE
Confidence            689999999999999999999999999865421 111        1  12221 235555443333   33334799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +++|  .......++.++...+++.+++
T Consensus       215 ~~~g--~~~~~~~~~~l~~~G~iv~~g~  240 (327)
T 1qor_A          215 DSVG--RDTWERSLDCLQRRGLMVSFGN  240 (327)
T ss_dssp             ECSC--GGGHHHHHHTEEEEEEEEECCC
T ss_pred             ECCc--hHHHHHHHHHhcCCCEEEEEec
Confidence            9998  5556677777774457777665

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.10  E-value=0.0011  Score=55.25  Aligned_cols=91  Identities=21%  Similarity=0.215  Sum_probs=60.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHH---HHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~---~~~~~~~~~~d~vi   77 (287)
                      +||+|.+|..+++.+...|++|++++|+..... .+.        +.  +.+. ..|..+.+.   +.+.....++|+||
T Consensus       152 ~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~-~~~--------~~--g~~~-~~d~~~~~~~~~i~~~~~~~~~d~vi  219 (333)
T 1wly_A          152 HAAAGGMGHIMVPWARHLGATVIGTVSTEEKAE-TAR--------KL--GCHH-TINYSTQDFAEVVREITGGKGVDVVY  219 (333)
T ss_dssp             TTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHH-HHH--------HH--TCSE-EEETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH--------Hc--CCCE-EEECCCHHHHHHHHHHhCCCCCeEEE
Confidence            689999999999999999999999999865421 111        11  2221 235555433   33333334799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +++|.  ......++.++...+++.++.
T Consensus       220 ~~~g~--~~~~~~~~~l~~~G~iv~~g~  245 (333)
T 1wly_A          220 DSIGK--DTLQKSLDCLRPRGMCAAYGH  245 (333)
T ss_dssp             ECSCT--TTHHHHHHTEEEEEEEEECCC
T ss_pred             ECCcH--HHHHHHHHhhccCCEEEEEec
Confidence            99986  556667777763347776654

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=96.96  E-value=0.0019  Score=54.21  Aligned_cols=83  Identities=12%  Similarity=0.038  Sum_probs=60.4

Q ss_pred             CCcccchHHHHHHHHH-HcCCeEEEEEcCCccccccCCCC-------ChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-
Q 023110            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPGE-------SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~-~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-   71 (287)
                      |||+.-+|.+.+..|. ..|..|+++++......+.....       .....++.......+.+|+++.+.++++++.. 
T Consensus        56 tGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~vi~~i~  135 (401)
T 4ggo_A           56 LGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQVIEEAK  135 (401)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             ECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHHHHHHH
Confidence            6999999999999887 67999999998765533222100       01122333467889999999998888877642 


Q ss_pred             ----CccEEEecCCCC
Q 023110           72 ----GFDVVYDINGRE   83 (287)
Q Consensus        72 ----~~d~vi~~a~~~   83 (287)
                          ++|++||.++..
T Consensus       136 ~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          136 KKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HTTCCEEEEEECCCCS
T ss_pred             HhcCCCCEEEEecccc
Confidence                799999998864

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.88  E-value=0.00043  Score=54.49  Aligned_cols=64  Identities=14%  Similarity=-0.044  Sum_probs=51.8

Q ss_pred             ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCccEEEecCCC
Q 023110            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDINGR   82 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d~vi~~a~~   82 (287)
                      .|.+|+.+++.|.+.|+ |+++++++.... .+           ..++.++.+|..+++.+.++ ++  ++|.||.+.+.
T Consensus        17 ~G~~G~~la~~L~~~g~-v~vid~~~~~~~-~~-----------~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~~   81 (234)
T 2aef_A           17 WSESTLECLRELRGSEV-FVLAEDENVRKK-VL-----------RSGANFVHGDPTRVSDLEKANVR--GARAVIVDLES   81 (234)
T ss_dssp             CCHHHHHHHHHSTTSEE-EEEESCGGGHHH-HH-----------HTTCEEEESCTTCHHHHHHTTCT--TCSEEEECCSC
T ss_pred             CChHHHHHHHHHHhCCe-EEEEECCHHHHH-HH-----------hcCCeEEEcCCCCHHHHHhcCcc--hhcEEEEcCCC
Confidence            49999999999999999 999998876521 11           13688999999999988876 76  89999988754

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=96.85  E-value=0.00055  Score=71.46  Aligned_cols=81  Identities=11%  Similarity=0.065  Sum_probs=57.1

Q ss_pred             CCcccc-hHHHHHHHHHHcCCeEEEEEcCCcccccc-CCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc--------
Q 023110            1 MGGTRF-IGVFLSRLLVKEGHQVTLFTRGKAPIAQQ-LPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------   70 (287)
Q Consensus         1 tGatG~-iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--------   70 (287)
                      |||++- ||.++++.|+++|.+|++.+|+....... +.+.. ..+......+..+.+|+.|.+++.++++.        
T Consensus      2142 TGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~-~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~ 2220 (3089)
T 3zen_D         2142 TGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLY-RDHARFDATLWVVPANMASYSDIDKLVEWVGTEQTES 2220 (3089)
T ss_dssp             ESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHH-HHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSCCEEE
T ss_pred             eCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHH-HHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhhhhhh
Confidence            799888 99999999999999999999986651000 00000 00000123577899999999988877542        


Q ss_pred             -CCccEEEecCCC
Q 023110           71 -KGFDVVYDINGR   82 (287)
Q Consensus        71 -~~~d~vi~~a~~   82 (287)
                       -++|++||+||.
T Consensus      2221 fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2221 LGPQSIHLKDAQT 2233 (3089)
T ss_dssp             ESSSEEEECCCCC
T ss_pred             cCCCCEEEECCCc
Confidence             158999999996

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.80  E-value=0.0012  Score=54.30  Aligned_cols=71  Identities=25%  Similarity=0.254  Sum_probs=45.3

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      +||+|++|+.++..|+..|  .+|.+++++.... ...+.+..      ....++.+.    ...++.++++  ++|+||
T Consensus         6 iGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~------~~~~l~~~~----~t~d~~~a~~--~aDvVv   73 (314)
T 1mld_A            6 LGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIE------TRATVKGYL----GPEQLPDCLK--GCDVVV   73 (314)
T ss_dssp             ETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSS------SSCEEEEEE----SGGGHHHHHT--TCSEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccC------cCceEEEec----CCCCHHHHhC--CCCEEE
Confidence            5889999999999999888  7999999987211 00111000      000111111    1234667787  999999


Q ss_pred             ecCCCC
Q 023110           78 DINGRE   83 (287)
Q Consensus        78 ~~a~~~   83 (287)
                      ++++..
T Consensus        74 i~ag~~   79 (314)
T 1mld_A           74 IPAGVP   79 (314)
T ss_dssp             ECCSCC
T ss_pred             ECCCcC
Confidence            999874

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=96.77  E-value=0.00052  Score=57.47  Aligned_cols=91  Identities=10%  Similarity=-0.015  Sum_probs=57.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHH----hhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK----SSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~----~~~~~~~~d~v   76 (287)
                      +|++|.+|..+++.+...|.+|++++|+..... ...        +  .+... ..|+.+.+++.    ++... ++|+|
T Consensus       176 ~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~-~~~--------~--~g~~~-~~d~~~~~~~~~~~~~~~~~-~~D~v  242 (347)
T 2hcy_A          176 SGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEE-LFR--------S--IGGEV-FIDFTKEKDIVGAVLKATDG-GAHGV  242 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHH-HHH--------H--TTCCE-EEETTTCSCHHHHHHHHHTS-CEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHH-HHH--------H--cCCce-EEecCccHhHHHHHHHHhCC-CCCEE
Confidence            589999999999999999999999999876531 111        0  12222 23665433333    33333 79999


Q ss_pred             EecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      |++++. .......++.++...+++.+++
T Consensus       243 i~~~g~-~~~~~~~~~~l~~~G~iv~~g~  270 (347)
T 2hcy_A          243 INVSVS-EAAIEASTRYVRANGTTVLVGM  270 (347)
T ss_dssp             EECSSC-HHHHHHHTTSEEEEEEEEECCC
T ss_pred             EECCCc-HHHHHHHHHHHhcCCEEEEEeC
Confidence            999873 1233344444443347776664

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=96.74  E-value=0.0029  Score=52.79  Aligned_cols=91  Identities=18%  Similarity=0.096  Sum_probs=61.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChH---HHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~~~~~d~vi   77 (287)
                      +|++|.+|..+++.+...|++|++++|++.... .+.        +  .+.+. ..|..+.+   .+.+.....++|+||
T Consensus       173 ~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~-~~~--------~--~ga~~-~~d~~~~~~~~~~~~~~~~~~~d~vi  240 (343)
T 2eih_A          173 MAAGSGVSVAAIQIAKLFGARVIATAGSEDKLR-RAK--------A--LGADE-TVNYTHPDWPKEVRRLTGGKGADKVV  240 (343)
T ss_dssp             CSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHH-HHH--------H--HTCSE-EEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH--------h--cCCCE-EEcCCcccHHHHHHHHhCCCCceEEE
Confidence            689999999999999999999999999865521 111        1  12222 24665543   233333223799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ++++  .......++.++...+++.+++
T Consensus       241 ~~~g--~~~~~~~~~~l~~~G~~v~~g~  266 (343)
T 2eih_A          241 DHTG--ALYFEGVIKATANGGRIAIAGA  266 (343)
T ss_dssp             ESSC--SSSHHHHHHHEEEEEEEEESSC
T ss_pred             ECCC--HHHHHHHHHhhccCCEEEEEec
Confidence            9998  4556777788774347877665

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=96.71  E-value=0.0027  Score=53.28  Aligned_cols=91  Identities=13%  Similarity=0.095  Sum_probs=59.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHH---hhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK---SSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~---~~~~~~~~d~vi   77 (287)
                      +||+|.+|..+++.+...|.+|++++|++.... .++        +  -+.+ ...|..+.+...   +.....++|+||
T Consensus       169 ~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~--------~--~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi  236 (354)
T 2j8z_A          169 HAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQ-MAE--------K--LGAA-AGFNYKKEDFSEATLKFTKGAGVNLIL  236 (354)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHH--------H--HTCS-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH--------H--cCCc-EEEecCChHHHHHHHHHhcCCCceEEE
Confidence            689999999999999999999999999865521 111        1  1222 224555543333   333223799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +++|..  .....++.++...+++.++.
T Consensus       237 ~~~G~~--~~~~~~~~l~~~G~iv~~G~  262 (354)
T 2j8z_A          237 DCIGGS--YWEKNVNCLALDGRWVLYGL  262 (354)
T ss_dssp             ESSCGG--GHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCch--HHHHHHHhccCCCEEEEEec
Confidence            999853  45566777764457776653

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.66  E-value=0.0031  Score=52.39  Aligned_cols=91  Identities=21%  Similarity=0.223  Sum_probs=60.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChH---HHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~~~~~d~vi   77 (287)
                      +||+|.+|...++.+...|.+|++++++..+.. ..+        +  -+... ..|..+.+   .+.+.....++|+||
T Consensus       155 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~--------~--~ga~~-~~~~~~~~~~~~~~~~~~~~g~D~vi  222 (334)
T 3qwb_A          155 FAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-IAK--------E--YGAEY-LINASKEDILRQVLKFTNGKGVDASF  222 (334)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH--------H--TTCSE-EEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH--------H--cCCcE-EEeCCCchHHHHHHHHhCCCCceEEE
Confidence            589999999999999999999999999766522 111        1  12221 23444433   333333334799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +++|.  ......++.++...+++.++.
T Consensus       223 d~~g~--~~~~~~~~~l~~~G~iv~~G~  248 (334)
T 3qwb_A          223 DSVGK--DTFEISLAALKRKGVFVSFGN  248 (334)
T ss_dssp             ECCGG--GGHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCh--HHHHHHHHHhccCCEEEEEcC
Confidence            99984  556677777774457776654

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=96.66  E-value=0.00074  Score=56.18  Aligned_cols=92  Identities=14%  Similarity=0.248  Sum_probs=57.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhh---cCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS---AKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~~~~d~vi   77 (287)
                      +||+|.+|..+++.+...|.+|++++|+....... +        +  .+.. ...|..+.+++.+.+.   ..++|+||
T Consensus       152 ~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~--------~--~g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi  219 (333)
T 1v3u_A          152 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-K--------Q--IGFD-AAFNYKTVNSLEEALKKASPDGYDCYF  219 (333)
T ss_dssp             ESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H--------H--TTCS-EEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             ecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H--------h--cCCc-EEEecCCHHHHHHHHHHHhCCCCeEEE
Confidence            58999999999999999999999999876542111 1        0  1222 2346655222333222   13699999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEecc
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                      +++|.  ......++.++...+++.++..
T Consensus       220 ~~~g~--~~~~~~~~~l~~~G~~v~~g~~  246 (333)
T 1v3u_A          220 DNVGG--EFLNTVLSQMKDFGKIAICGAI  246 (333)
T ss_dssp             ESSCH--HHHHHHHTTEEEEEEEEECCCC
T ss_pred             ECCCh--HHHHHHHHHHhcCCEEEEEecc
Confidence            99984  3344455555533577766653

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=96.63  E-value=0.003  Score=52.29  Aligned_cols=91  Identities=16%  Similarity=0.075  Sum_probs=59.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChH---HHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~~~~~d~vi   77 (287)
                      +||+|.+|...++.+...|.+|+++++++.+.. ..+        +  .+... ..|..+.+   .+.+.....++|+||
T Consensus       147 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~--------~--~Ga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvi  214 (325)
T 3jyn_A          147 HAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA-HAK--------A--LGAWE-TIDYSHEDVAKRVLELTDGKKCPVVY  214 (325)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHH--------H--HTCSE-EEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH--------H--cCCCE-EEeCCCccHHHHHHHHhCCCCceEEE
Confidence            589999999999999999999999999866521 111        1  12221 23444433   333333334799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +++|.  ......++.++...+++.++.
T Consensus       215 d~~g~--~~~~~~~~~l~~~G~iv~~g~  240 (325)
T 3jyn_A          215 DGVGQ--DTWLTSLDSVAPRGLVVSFGN  240 (325)
T ss_dssp             ESSCG--GGHHHHHTTEEEEEEEEECCC
T ss_pred             ECCCh--HHHHHHHHHhcCCCEEEEEec
Confidence            99985  445566666664457776654

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.59  E-value=0.0079  Score=50.27  Aligned_cols=91  Identities=19%  Similarity=0.236  Sum_probs=59.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChH---HHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~~~~~d~vi   77 (287)
                      +||+|.+|...++.+...|.+|++++++..+.. .++        +  -+... ..|..+.+   .+.++....++|+||
T Consensus       171 ~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~--------~--~Ga~~-~~~~~~~~~~~~v~~~~~~~g~D~vi  238 (349)
T 3pi7_A          171 TAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIA-LLK--------D--IGAAH-VLNEKAPDFEATLREVMKAEQPRIFL  238 (349)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHH-HHH--------H--HTCSE-EEETTSTTHHHHHHHHHHHHCCCEEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH--------H--cCCCE-EEECCcHHHHHHHHHHhcCCCCcEEE
Confidence            589999999999999999999999998876521 111        1  12222 12443332   233333223799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ++++.  ......++.++...+++.+++
T Consensus       239 d~~g~--~~~~~~~~~l~~~G~iv~~G~  264 (349)
T 3pi7_A          239 DAVTG--PLASAIFNAMPKRARWIIYGR  264 (349)
T ss_dssp             ESSCH--HHHHHHHHHSCTTCEEEECCC
T ss_pred             ECCCC--hhHHHHHhhhcCCCEEEEEec
Confidence            99984  334667778875568887664

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.56  E-value=0.003  Score=52.75  Aligned_cols=92  Identities=15%  Similarity=0.174  Sum_probs=57.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC-hHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d-~~~~~~~~~~~~~d~vi~~   79 (287)
                      +||+|.+|...++.+...|.+|++++++..+.. ..+        ++ ..-..+..+ .+ .+.+.+.....++|+||++
T Consensus       166 ~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~--------~~-ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~  234 (342)
T 4eye_A          166 LGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATE-FVK--------SV-GADIVLPLE-EGWAKAVREATGGAGVDMVVDP  234 (342)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHH--------HH-TCSEEEESS-TTHHHHHHHHTTTSCEEEEEES
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH--------hc-CCcEEecCc-hhHHHHHHHHhCCCCceEEEEC
Confidence            589999999999999999999999999876531 111        11 111223222 22 2333444433479999999


Q ss_pred             CCCCcccHHHHHHhCCCCccEEEEec
Q 023110           80 NGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        80 a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +|..  .....++.++...+++.++.
T Consensus       235 ~g~~--~~~~~~~~l~~~G~iv~~G~  258 (342)
T 4eye_A          235 IGGP--AFDDAVRTLASEGRLLVVGF  258 (342)
T ss_dssp             CC----CHHHHHHTEEEEEEEEEC--
T ss_pred             Cchh--HHHHHHHhhcCCCEEEEEEc
Confidence            9853  45666777664457776654

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.56  E-value=0.0034  Score=52.80  Aligned_cols=92  Identities=21%  Similarity=0.142  Sum_probs=59.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChH---HHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~~~~~d~vi   77 (287)
                      +||+|.+|..+++.+...|.+|+++++++.+.. .++        +  -+.+.+ .|..+.+   .+.+.. ..++|+||
T Consensus       170 ~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~-~~~--------~--~Ga~~~-~~~~~~~~~~~~~~~~-~~g~D~vi  236 (362)
T 2c0c_A          170 TAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSA-FLK--------S--LGCDRP-INYKTEPVGTVLKQEY-PEGVDVVY  236 (362)
T ss_dssp             TTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHH-HHH--------H--TTCSEE-EETTTSCHHHHHHHHC-TTCEEEEE
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHH-HHH--------H--cCCcEE-EecCChhHHHHHHHhc-CCCCCEEE
Confidence            589999999999999999999999999865421 111        0  122221 2443322   222221 23799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEecce
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~  107 (287)
                      ++++.  ......++.++...+++.+++..
T Consensus       237 d~~g~--~~~~~~~~~l~~~G~iv~~g~~~  264 (362)
T 2c0c_A          237 ESVGG--AMFDLAVDALATKGRLIVIGFIS  264 (362)
T ss_dssp             ECSCT--HHHHHHHHHEEEEEEEEECCCGG
T ss_pred             ECCCH--HHHHHHHHHHhcCCEEEEEeCCC
Confidence            99984  45566777777445888777643

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=96.49  E-value=0.0011  Score=55.45  Aligned_cols=91  Identities=13%  Similarity=0.160  Sum_probs=56.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh----HHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~----~~~~~~~~~~~~d~v   76 (287)
                      +||+|.+|..+++.+...|.+|++++|+.........+          -+... ..|..+.    +.+.+.. ..++|+|
T Consensus       162 ~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~----------~g~~~-~~d~~~~~~~~~~~~~~~-~~~~d~v  229 (345)
T 2j3h_A          162 SAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK----------FGFDD-AFNYKEESDLTAALKRCF-PNGIDIY  229 (345)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----------SCCSE-EEETTSCSCSHHHHHHHC-TTCEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----------cCCce-EEecCCHHHHHHHHHHHh-CCCCcEE
Confidence            68999999999999999999999999986552111000          12222 2355443    2233322 2379999


Q ss_pred             EecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      |++++.  ......++.++...+++.++.
T Consensus       230 i~~~g~--~~~~~~~~~l~~~G~~v~~G~  256 (345)
T 2j3h_A          230 FENVGG--KMLDAVLVNMNMHGRIAVCGM  256 (345)
T ss_dssp             EESSCH--HHHHHHHTTEEEEEEEEECCC
T ss_pred             EECCCH--HHHHHHHHHHhcCCEEEEEcc
Confidence            999874  344555555553347776654

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.49  E-value=0.0019  Score=55.35  Aligned_cols=67  Identities=19%  Similarity=0.292  Sum_probs=54.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d~vi~~a~   81 (287)
                      |.|.+|+.+++.|.+.|++|+++++++..... +.          ..++.++.+|.++++.+.++ ++  ++|+||-+.+
T Consensus        11 G~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~-~~----------~~g~~vi~GDat~~~~L~~agi~--~A~~viv~~~   77 (413)
T 3l9w_A           11 GFGRFGQITGRLLLSSGVKMVVLDHDPDHIET-LR----------KFGMKVFYGDATRMDLLESAGAA--KAEVLINAID   77 (413)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCHHHHHH-HH----------HTTCCCEESCTTCHHHHHHTTTT--TCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHH-HH----------hCCCeEEEcCCCCHHHHHhcCCC--ccCEEEECCC
Confidence            45999999999999999999999999876321 11          24778899999999988877 66  8999987765


Q ss_pred             C
Q 023110           82 R   82 (287)
Q Consensus        82 ~   82 (287)
                      .
T Consensus        78 ~   78 (413)
T 3l9w_A           78 D   78 (413)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=96.49  E-value=0.0038  Score=45.79  Aligned_cols=78  Identities=15%  Similarity=0.107  Sum_probs=51.9

Q ss_pred             ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh--HHHHhhhhc----CCccEEE
Q 023110            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSA----KGFDVVY   77 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~--~~~~~~~~~----~~~d~vi   77 (287)
                      +|.++.+.++.|.+.|++|++..|+..... .... ......+....+..+.+|+.++  +++.++++.    .+-|++|
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~-~~~~-~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLV  102 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKD-AHPD-EGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLV  102 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTT-SCTT-HHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCccccc-cccc-HHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence            678999999999999999998877654321 1100 0111222223466778899988  777766542    3449999


Q ss_pred             ecCCCC
Q 023110           78 DINGRE   83 (287)
Q Consensus        78 ~~a~~~   83 (287)
                      ||+|..
T Consensus       103 nnAgg~  108 (157)
T 3gxh_A          103 HCLANY  108 (157)
T ss_dssp             ECSBSH
T ss_pred             ECCCCC
Confidence            999863

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.47  E-value=0.00038  Score=53.90  Aligned_cols=79  Identities=15%  Similarity=0.143  Sum_probs=48.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|.+|+++++.|.+.|++|++++|++..... +.+    .......     ..|+. .+++.++++  ++|+||++.
T Consensus         6 iGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~-~~~----~~~~~~~-----~~~~~-~~~~~~~~~--~~D~Vi~~~   72 (212)
T 1jay_A            6 LGGTGNLGKGLALRLATLGHEIVVGSRREEKAEA-KAA----EYRRIAG-----DASIT-GMKNEDAAE--ACDIAVLTI   72 (212)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHH-HHH----HHHHHHS-----SCCEE-EEEHHHHHH--HCSEEEECS
T ss_pred             EcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHH----Hhccccc-----cCCCC-hhhHHHHHh--cCCEEEEeC
Confidence            4789999999999999999999999998654211 110    0000000     01111 123555666  799999997


Q ss_pred             CCCcccHHHHHHhC
Q 023110           81 GREADEVEPILDAL   94 (287)
Q Consensus        81 ~~~~~~~~~ll~~~   94 (287)
                      ..  .....+++.+
T Consensus        73 ~~--~~~~~~~~~l   84 (212)
T 1jay_A           73 PW--EHAIDTARDL   84 (212)
T ss_dssp             CH--HHHHHHHHHT
T ss_pred             Ch--hhHHHHHHHH
Confidence            63  3344555443

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.44  E-value=0.0027  Score=51.96  Aligned_cols=88  Identities=15%  Similarity=0.123  Sum_probs=57.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|++|.+|..+++.+...|.+|+++++++.+.. ..+        +  -+.+.+ .|..+.+++.+.+.  ++|+||+ +
T Consensus       132 ~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~--------~--~ga~~~-~~~~~~~~~~~~~~--~~d~vid-~  196 (302)
T 1iz0_A          132 QAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPL--------A--LGAEEA-ATYAEVPERAKAWG--GLDLVLE-V  196 (302)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH-HHH--------H--TTCSEE-EEGGGHHHHHHHTT--SEEEEEE-C
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH--------h--cCCCEE-EECCcchhHHHHhc--CceEEEE-C
Confidence            589999999999999999999999999866521 111        0  122222 35444133444444  8999999 8


Q ss_pred             CCCcccHHHHHHhCCCCccEEEEec
Q 023110           81 GREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      |.  ......++.++...+++.++.
T Consensus       197 g~--~~~~~~~~~l~~~G~~v~~g~  219 (302)
T 1iz0_A          197 RG--KEVEESLGLLAHGGRLVYIGA  219 (302)
T ss_dssp             SC--TTHHHHHTTEEEEEEEEEC--
T ss_pred             CH--HHHHHHHHhhccCCEEEEEeC
Confidence            75  455666666663347776654

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=96.41  E-value=0.0074  Score=50.22  Aligned_cols=91  Identities=15%  Similarity=0.064  Sum_probs=57.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChH---HHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~~~~~d~vi   77 (287)
                      +||+|.+|...++.+...|.+|++++++..+.. .+        .+  .+.+. ..|..+.+   .+.+.....++|+||
T Consensus       151 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~--------~~--lga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvi  218 (340)
T 3gms_A          151 NACGSAIGHLFAQLSQILNFRLIAVTRNNKHTE-EL--------LR--LGAAY-VIDTSTAPLYETVMELTNGIGADAAI  218 (340)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHH-HH--------HH--HTCSE-EEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH--------Hh--CCCcE-EEeCCcccHHHHHHHHhCCCCCcEEE
Confidence            589999999999999989999999999876632 11        11  12222 12444433   333333334799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +++|.  ......++.++...+++.++.
T Consensus       219 d~~g~--~~~~~~~~~l~~~G~iv~~G~  244 (340)
T 3gms_A          219 DSIGG--PDGNELAFSLRPNGHFLTIGL  244 (340)
T ss_dssp             ESSCH--HHHHHHHHTEEEEEEEEECCC
T ss_pred             ECCCC--hhHHHHHHHhcCCCEEEEEee
Confidence            99884  334445566654457776654

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=96.37  E-value=0.0043  Score=52.08  Aligned_cols=92  Identities=16%  Similarity=0.182  Sum_probs=58.9

Q ss_pred             CCcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChH---HHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~~~~~d~v   76 (287)
                      +||+|.+|..+++.+...|. +|++++++...... +.        + .-+.. ...|..+.+   .+.+.... ++|+|
T Consensus       167 ~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~-~~--------~-~~g~~-~~~d~~~~~~~~~~~~~~~~-~~d~v  234 (357)
T 2zb4_A          167 SGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCIL-LT--------S-ELGFD-AAINYKKDNVAEQLRESCPA-GVDVY  234 (357)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HH--------H-TSCCS-EEEETTTSCHHHHHHHHCTT-CEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHH-HH--------H-HcCCc-eEEecCchHHHHHHHHhcCC-CCCEE
Confidence            69999999999999999999 99999998654211 10        0 01222 234655533   23333332 69999


Q ss_pred             EecCCCCcccHHHHHHhCCCCccEEEEecc
Q 023110           77 YDINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                      |+++|.  ......++.++...+++.++..
T Consensus       235 i~~~G~--~~~~~~~~~l~~~G~iv~~G~~  262 (357)
T 2zb4_A          235 FDNVGG--NISDTVISQMNENSHIILCGQI  262 (357)
T ss_dssp             EESCCH--HHHHHHHHTEEEEEEEEECCCG
T ss_pred             EECCCH--HHHHHHHHHhccCcEEEEECCc
Confidence            999983  4455566666644577776653

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.30  E-value=0.0084  Score=50.22  Aligned_cols=90  Identities=17%  Similarity=0.136  Sum_probs=58.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh---HHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~~~~~~~~~~~d~vi   77 (287)
                      +||+|.+|..+++.+...|.+|+++++++.+.. .++        +  .+... ..|..+.   +.+.+.. ..++|+||
T Consensus       174 ~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~--------~--lGa~~-~~~~~~~~~~~~~~~~~-~~g~Dvvi  240 (353)
T 4dup_A          174 HGGTSGIGTTAIQLARAFGAEVYATAGSTGKCE-ACE--------R--LGAKR-GINYRSEDFAAVIKAET-GQGVDIIL  240 (353)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH--------H--HTCSE-EEETTTSCHHHHHHHHH-SSCEEEEE
T ss_pred             EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH--------h--cCCCE-EEeCCchHHHHHHHHHh-CCCceEEE
Confidence            589999999999999999999999999876531 111        1  12221 1344443   2333333 34799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +++|.  ......++.++...+++.++.
T Consensus       241 d~~g~--~~~~~~~~~l~~~G~iv~~g~  266 (353)
T 4dup_A          241 DMIGA--AYFERNIASLAKDGCLSIIAF  266 (353)
T ss_dssp             ESCCG--GGHHHHHHTEEEEEEEEECCC
T ss_pred             ECCCH--HHHHHHHHHhccCCEEEEEEe
Confidence            99984  355566666664456776654

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=96.27  E-value=0.0049  Score=51.24  Aligned_cols=94  Identities=17%  Similarity=0.251  Sum_probs=59.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhh--cCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS--AKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~~~d~vi~   78 (287)
                      +||+|.+|..+++.+...|.+|++++|++.+.....++          -+... ..|..+.+....+.+  ..++|+||+
T Consensus       156 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----------~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~  224 (336)
T 4b7c_A          156 SGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE----------LGFDG-AIDYKNEDLAAGLKRECPKGIDVFFD  224 (336)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----------TCCSE-EEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----------cCCCE-EEECCCHHHHHHHHHhcCCCceEEEE
Confidence            69999999999999999999999999987653211011          12222 235544333222221  237999999


Q ss_pred             cCCCCcccHHHHHHhCCCCccEEEEecce
Q 023110           79 INGREADEVEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~  107 (287)
                      ++|.  ......++.++...+++.++...
T Consensus       225 ~~g~--~~~~~~~~~l~~~G~iv~~G~~~  251 (336)
T 4b7c_A          225 NVGG--EILDTVLTRIAFKARIVLCGAIS  251 (336)
T ss_dssp             SSCH--HHHHHHHTTEEEEEEEEECCCGG
T ss_pred             CCCc--chHHHHHHHHhhCCEEEEEeecc
Confidence            9983  34455555555445788776544

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=96.26  E-value=0.0048  Score=51.67  Aligned_cols=90  Identities=10%  Similarity=0.153  Sum_probs=57.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHH---hhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK---SSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~---~~~~~~~~d~vi   77 (287)
                      +||+|.+|..+++.+...|.+|++++|++.... ...        +  .+... ..|..+.+...   +.....++|+||
T Consensus       177 ~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~--------~--~ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi  244 (351)
T 1yb5_A          177 HGASGGVGLAACQIARAYGLKILGTAGTEEGQK-IVL--------Q--NGAHE-VFNHREVNYIDKIKKYVGEKGIDIII  244 (351)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH--------H--TTCSE-EEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH-HHH--------H--cCCCE-EEeCCCchHHHHHHHHcCCCCcEEEE
Confidence            589999999999999999999999999866522 111        0  12222 24555544333   333223799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEe
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      +++|.  ......++.++...+++.++
T Consensus       245 ~~~G~--~~~~~~~~~l~~~G~iv~~g  269 (351)
T 1yb5_A          245 EMLAN--VNLSKDLSLLSHGGRVIVVG  269 (351)
T ss_dssp             ESCHH--HHHHHHHHHEEEEEEEEECC
T ss_pred             ECCCh--HHHHHHHHhccCCCEEEEEe
Confidence            99874  33455566666335777665

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.21  E-value=0.0025  Score=53.02  Aligned_cols=64  Identities=13%  Similarity=-0.060  Sum_probs=53.2

Q ss_pred             ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCccEEEecCCC
Q 023110            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDINGR   82 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d~vi~~a~~   82 (287)
                      .|.+|+.+++.|.++|+ |++++++++...  +.          ..++.++.+|..|++.+.++ ++  ++|.|+-+.+.
T Consensus       123 ~G~~g~~l~~~L~~~g~-v~vid~~~~~~~--~~----------~~~~~~i~gd~~~~~~L~~a~i~--~a~~vi~~~~~  187 (336)
T 1lnq_A          123 WSESTLECLRELRGSEV-FVLAEDENVRKK--VL----------RSGANFVHGDPTRVSDLEKANVR--GARAVIVDLES  187 (336)
T ss_dssp             CCHHHHHHHTTGGGSCE-EEEESCGGGHHH--HH----------HTTCEEEESCTTSHHHHHHTCST--TEEEEEECCSS
T ss_pred             CcHHHHHHHHHHHhCCc-EEEEeCChhhhh--HH----------hCCcEEEEeCCCCHHHHHhcChh--hccEEEEcCCc
Confidence            59999999999999999 999998876632  21          25789999999999999877 66  89999987753

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.16  E-value=0.026  Score=46.30  Aligned_cols=84  Identities=14%  Similarity=0.193  Sum_probs=56.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|++...                .++....    ..+++.++++  ++|+|+.+...
T Consensus       146 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~~~~----~~~~l~ell~--~aDiV~l~~Pl  203 (315)
T 3pp8_A          146 GAGVLGAKVAESLQAWGFPLRCWSRSRKSW----------------PGVESYV----GREELRAFLN--QTRVLINLLPN  203 (315)
T ss_dssp             CCSHHHHHHHHHHHTTTCCEEEEESSCCCC----------------TTCEEEE----SHHHHHHHHH--TCSEEEECCCC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEEcCCchhh----------------hhhhhhc----ccCCHHHHHh--hCCEEEEecCC
Confidence            579999999999999999999999987641                2222221    2357888888  89998876543


Q ss_pred             Ccc--c--HHHHHHhCCCCccEEEEeccee
Q 023110           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~--~--~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +..  +  ....+..++...-+|.+|...+
T Consensus       204 t~~t~~li~~~~l~~mk~gailIN~aRG~~  233 (315)
T 3pp8_A          204 TAQTVGIINSELLDQLPDGAYVLNLARGVH  233 (315)
T ss_dssp             CGGGTTCBSHHHHTTSCTTEEEEECSCGGG
T ss_pred             chhhhhhccHHHHhhCCCCCEEEECCCChh
Confidence            211  1  1345555665567777776554

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.14  E-value=0.0007  Score=56.19  Aligned_cols=95  Identities=15%  Similarity=0.067  Sum_probs=54.5

Q ss_pred             CCcccchHHHHHHHHHHcCC--e-----EEEEEcCCcc--ccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC
Q 023110            1 MGGTRFIGVFLSRLLVKEGH--Q-----VTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~--~-----V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~   71 (287)
                      |||+|+||++++..|...|.  +     ++.++++...  ......     .+.  +....+. .++.......+.++  
T Consensus         9 ~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~-----DL~--~~~~~~~-~~~~~~~~~~~~~~--   78 (333)
T 5mdh_A            9 TGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLM-----ELQ--DCALPLL-KDVIATDKEEIAFK--   78 (333)
T ss_dssp             SSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHH-----HHH--HTCCTTE-EEEEEESCHHHHTT--
T ss_pred             ECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHh-----hhH--hhhhccc-CCEEEcCCcHHHhC--
Confidence            69999999999999998764  5     8888886421  100000     000  0000001 12222223455677  


Q ss_pred             CccEEEecCCCC--------------cccHHHHHHhCC--CCc--cEEEEec
Q 023110           72 GFDVVYDINGRE--------------ADEVEPILDALP--NLE--QFIYCSS  105 (287)
Q Consensus        72 ~~d~vi~~a~~~--------------~~~~~~ll~~~~--~~~--~~i~~Ss  105 (287)
                      ++|+||++||..              ...++++++++.  +.+  +++.+|.
T Consensus        79 daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           79 DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            999999999864              223556666655  332  5766664

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.05  E-value=0.011  Score=46.64  Aligned_cols=95  Identities=14%  Similarity=0.159  Sum_probs=61.8

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhh---hcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL---SAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~---~~~~~d~v   76 (287)
                      .|++|.+|+.+++.+.+. ++++++...........+           ..+.+ +..|++.++...+.+   .+.+.++|
T Consensus         6 ~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~-----------~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~V   73 (245)
T 1p9l_A            6 LGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT-----------DGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAV   73 (245)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH-----------HTTCC-EEEECSCTTTHHHHHHHHHHTTCEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh-----------ccCCc-EEEEccChHHHHHHHHHHHHcCCCEE
Confidence            488999999999999876 899988775432211100           11333 567888776655443   23588999


Q ss_pred             EecCCCCcccHHHHHHhCC-C-CccEEEEecce
Q 023110           77 YDINGREADEVEPILDALP-N-LEQFIYCSSAG  107 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~-~-~~~~i~~Ss~~  107 (287)
                      +-..|.+......+.++++ . ...+++.+..+
T Consensus        74 igTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~s  106 (245)
T 1p9l_A           74 VGTTGFTAERFQQVESWLVAKPNTSVLIAPNFA  106 (245)
T ss_dssp             ECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCC
T ss_pred             EcCCCCCHHHHHHHHHHHHhCCCCCEEEECCcc
Confidence            9888877665556666665 3 44666665543

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=95.81  E-value=0.026  Score=46.04  Aligned_cols=28  Identities=14%  Similarity=0.216  Sum_probs=25.2

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~   30 (287)
                      +||..|.+++++++.+|++|+.+++..+
T Consensus        63 SSGkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           63 SSGRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            4699999999999999999999998654

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=95.78  E-value=0.033  Score=45.38  Aligned_cols=93  Identities=10%  Similarity=0.032  Sum_probs=49.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCC--ChhhhhhhcCCeEEEEecCCChHHHHhhhhc------CCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~------~~~d   74 (287)
                      |.|.+|..+++.|++.||+|++.+|++++........  .-....+.....+++..-+.++..+.+.+..      ..-+
T Consensus        12 GLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~   91 (297)
T 4gbj_A           12 GLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGKDG   91 (297)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCTTC
T ss_pred             ecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCCCe
Confidence            5799999999999999999999999987743222110  0011111223344555555555444433210      1334


Q ss_pred             EEEecCCCCcccHHHHHHhCC
Q 023110           75 VVYDINGREADEVEPILDALP   95 (287)
Q Consensus        75 ~vi~~a~~~~~~~~~ll~~~~   95 (287)
                      ++|++.......++.+.+.+.
T Consensus        92 iiid~sT~~p~~~~~~~~~~~  112 (297)
T 4gbj_A           92 VHVSMSTISPETSRQLAQVHE  112 (297)
T ss_dssp             EEEECSCCCHHHHHHHHHHHH
T ss_pred             EEEECCCCChHHHHHHHHHHH
Confidence            677777776666666666654

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=95.78  E-value=0.009  Score=50.47  Aligned_cols=92  Identities=15%  Similarity=0.123  Sum_probs=55.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|.+|...++.+...|.+|+++++. .+ .+.++        +  -+.+.+ .|..+.+....+.+..++|+||+++
T Consensus       190 ~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~-~~-~~~~~--------~--lGa~~v-~~~~~~~~~~~~~~~~g~D~vid~~  256 (375)
T 2vn8_A          190 LGASGGVGTFAIQVMKAWDAHVTAVCSQ-DA-SELVR--------K--LGADDV-IDYKSGSVEEQLKSLKPFDFILDNV  256 (375)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECG-GG-HHHHH--------H--TTCSEE-EETTSSCHHHHHHTSCCBSEEEESS
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeCh-HH-HHHHH--------H--cCCCEE-EECCchHHHHHHhhcCCCCEEEECC
Confidence            4889999999999999999999998743 32 11111        1  123222 3444443333333334799999999


Q ss_pred             CCCcccHHHHHHhCCCCccEEEEec
Q 023110           81 GREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      |.........++.++...+++.+++
T Consensus       257 g~~~~~~~~~~~~l~~~G~iv~~g~  281 (375)
T 2vn8_A          257 GGSTETWAPDFLKKWSGATYVTLVT  281 (375)
T ss_dssp             CTTHHHHGGGGBCSSSCCEEEESCC
T ss_pred             CChhhhhHHHHHhhcCCcEEEEeCC
Confidence            8653322334444554457776654

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=95.75  E-value=0.016  Score=47.23  Aligned_cols=93  Identities=11%  Similarity=0.069  Sum_probs=59.2

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCC--CChhhhhhhcCCeEEEEecCCChHHHHhhhhcC--------C
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--------G   72 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--------~   72 (287)
                      |.|.+|..+++.|++.||+|++.+|++++.......  ..-....+.....+++..-+.+.+.+++++...        .
T Consensus        10 GlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~   89 (300)
T 3obb_A           10 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP   89 (300)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC
T ss_pred             eehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCC
Confidence            579999999999999999999999997763221110  000011122345556666667777777665421        1


Q ss_pred             ccEEEecCCCCcccHHHHHHhCC
Q 023110           73 FDVVYDINGREADEVEPILDALP   95 (287)
Q Consensus        73 ~d~vi~~a~~~~~~~~~ll~~~~   95 (287)
                      =++||+++......++.+.+.++
T Consensus        90 g~iiId~sT~~p~~~~~~a~~~~  112 (300)
T 3obb_A           90 GTLVLECSTIAPTSARKIHAAAR  112 (300)
T ss_dssp             -CEEEECSCCCHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCHHHHHHHHHHHH
Confidence            24677777777777777777665

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=95.74  E-value=0.0076  Score=52.05  Aligned_cols=30  Identities=23%  Similarity=0.447  Sum_probs=28.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~   32 (287)
                      |+|++|..++..|.+.|++|++++|++...
T Consensus        15 GlG~vG~~~A~~La~~G~~V~~~D~~~~kv   44 (446)
T 4a7p_A           15 GTGYVGLVSGACFSDFGHEVVCVDKDARKI   44 (446)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            689999999999999999999999998874

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=95.71  E-value=0.006  Score=50.92  Aligned_cols=91  Identities=15%  Similarity=0.174  Sum_probs=52.7

Q ss_pred             CCcccchHHHHHHHHHHcC-----C-eEEEEEcCCc--cccc-cCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC
Q 023110            1 MGGTRFIGVFLSRLLVKEG-----H-QVTLFTRGKA--PIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-----~-~V~~~~r~~~--~~~~-~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~   71 (287)
                      .||||++|+.|++.|.+++     + +|+.+.+..+  +... .....     .. ...+.+  .|+ +.+    .+.  
T Consensus        15 vGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l-----~~-~~~~~~--~~~-~~~----~~~--   79 (352)
T 2nqt_A           15 AGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHL-----TP-LAHRVV--EPT-EAA----VLG--   79 (352)
T ss_dssp             ETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTC-----GG-GTTCBC--EEC-CHH----HHT--
T ss_pred             ECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccc-----cc-cceeee--ccC-CHH----Hhc--
Confidence            4999999999999999887     3 7777764322  1111 11100     00 011222  222 222    244  


Q ss_pred             CccEEEecCCCCcccHHHHHHhCCCCccEEEEeccee
Q 023110           72 GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        72 ~~d~vi~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      ++|+||.+.+...  +..+++.++...++|-+|+..-
T Consensus        80 ~~DvVf~alg~~~--s~~~~~~~~~G~~vIDlSa~~R  114 (352)
T 2nqt_A           80 GHDAVFLALPHGH--SAVLAQQLSPETLIIDCGADFR  114 (352)
T ss_dssp             TCSEEEECCTTSC--CHHHHHHSCTTSEEEECSSTTT
T ss_pred             CCCEEEECCCCcc--hHHHHHHHhCCCEEEEECCCcc
Confidence            8999999987543  4445555452357888888753

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=95.71  E-value=0.0042  Score=52.23  Aligned_cols=91  Identities=14%  Similarity=0.219  Sum_probs=58.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|+ |-+|+.+++.|...|.+|++++|++.+.. .+.+       .....+..+   ..+.+.+.+.+.  ++|+||+++
T Consensus       173 iGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~-~~~~-------~~~~~~~~~---~~~~~~~~~~~~--~~DvVI~~~  238 (361)
T 1pjc_A          173 LGG-GVVGTEAAKMAVGLGAQVQIFDINVERLS-YLET-------LFGSRVELL---YSNSAEIETAVA--EADLLIGAV  238 (361)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHH-------HHGGGSEEE---ECCHHHHHHHHH--TCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHH-HHHH-------hhCceeEee---eCCHHHHHHHHc--CCCEEEECC
Confidence            366 99999999999999999999999876521 1110       001122221   234556777777  899999998


Q ss_pred             CCCcc-----cHHHHHHhCCCCccEEEEec
Q 023110           81 GREAD-----EVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~-----~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +....     -....++.++....++.++.
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g~~ivdv~~  268 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTGSVIVDVAV  268 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             CcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence            75331     14456666764456666554

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.64  E-value=0.044  Score=45.16  Aligned_cols=84  Identities=12%  Similarity=0.087  Sum_probs=55.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|+..... .+.              ..+     ...++.++++  ++|+|+.+...
T Consensus       144 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-~~~--------------~~~-----~~~~l~ell~--~aDvV~l~lPl  201 (324)
T 3evt_A          144 GTGQIGQSLAAKASALGMHVIGVNTTGHPAD-HFH--------------ETV-----AFTATADALA--TANFIVNALPL  201 (324)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSCCCCT-TCS--------------EEE-----EGGGCHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHhCCCEEEEECCCcchhH-hHh--------------hcc-----ccCCHHHHHh--hCCEEEEcCCC
Confidence            5799999999999999999999999865421 111              111     1234566777  78988876543


Q ss_pred             Ccc----cHHHHHHhCCCCccEEEEeccee
Q 023110           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +..    -....+..++...-+|.+|...+
T Consensus       202 t~~t~~li~~~~l~~mk~gailIN~aRG~~  231 (324)
T 3evt_A          202 TPTTHHLFSTELFQQTKQQPMLINIGRGPA  231 (324)
T ss_dssp             CGGGTTCBSHHHHHTCCSCCEEEECSCGGG
T ss_pred             chHHHHhcCHHHHhcCCCCCEEEEcCCChh
Confidence            211    12345666776667888876554

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=95.64  E-value=0.015  Score=48.97  Aligned_cols=90  Identities=13%  Similarity=0.137  Sum_probs=60.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|+ |.+|...++.+...|.+|+++++++.+.....++          -+.+. ..|..+.+.+.++..  ++|+||+++
T Consensus       194 ~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~----------lGa~~-v~~~~~~~~~~~~~~--~~D~vid~~  259 (366)
T 1yqd_A          194 VGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN----------FGADS-FLVSRDQEQMQAAAG--TLDGIIDTV  259 (366)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT----------SCCSE-EEETTCHHHHHHTTT--CEEEEEECC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----------cCCce-EEeccCHHHHHHhhC--CCCEEEECC
Confidence            364 9999999999999999999999887653211100          12222 245666666766655  899999998


Q ss_pred             CCCcccHHHHHHhCCCCccEEEEec
Q 023110           81 GREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +... .....++.++...+++.+++
T Consensus       260 g~~~-~~~~~~~~l~~~G~iv~~g~  283 (366)
T 1yqd_A          260 SAVH-PLLPLFGLLKSHGKLILVGA  283 (366)
T ss_dssp             SSCC-CSHHHHHHEEEEEEEEECCC
T ss_pred             CcHH-HHHHHHHHHhcCCEEEEEcc
Confidence            7532 24556677764457777765

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.60  E-value=0.0058  Score=53.14  Aligned_cols=67  Identities=15%  Similarity=0.257  Sum_probs=53.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d~vi~~a~   81 (287)
                      |.|.+|++|++.|.++|++|+++++++........          .-++..+.||.++++.|.++ ++  ++|.+|-+.+
T Consensus        10 G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~----------~~~~~~i~Gd~~~~~~L~~Agi~--~ad~~ia~t~   77 (461)
T 4g65_A           10 GAGQVGGTLAENLVGENNDITIVDKDGDRLRELQD----------KYDLRVVNGHASHPDVLHEAGAQ--DADMLVAVTN   77 (461)
T ss_dssp             CCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHH----------HSSCEEEESCTTCHHHHHHHTTT--TCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----------hcCcEEEEEcCCCHHHHHhcCCC--cCCEEEEEcC
Confidence            57999999999999999999999999766321111          13678899999999988876 45  8999886654

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.55  E-value=0.0083  Score=49.25  Aligned_cols=73  Identities=11%  Similarity=0.144  Sum_probs=49.5

Q ss_pred             CCcccchHHHHHHHHHHcCC-eEEEEEcCC---ccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      +|+ |-+|++++..|.+.|. +|+++.|+.   .+. +.+.    ..+.. ..+......++.+.+.+.+.+.  ++|+|
T Consensus       160 lGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a-~~la----~~~~~-~~~~~~~~~~~~~~~~l~~~l~--~aDiI  230 (315)
T 3tnl_A          160 CGA-GGAATAICIQAALDGVKEISIFNRKDDFYANA-EKTV----EKINS-KTDCKAQLFDIEDHEQLRKEIA--ESVIF  230 (315)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHH-HHHH----HHHHH-HSSCEEEEEETTCHHHHHHHHH--TCSEE
T ss_pred             ECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHH-HHHH----HHhhh-hcCCceEEeccchHHHHHhhhc--CCCEE
Confidence            365 8899999999999998 899999984   321 1111    00000 1123444567777777888888  89999


Q ss_pred             EecCCC
Q 023110           77 YDINGR   82 (287)
Q Consensus        77 i~~a~~   82 (287)
                      |++...
T Consensus       231 INaTp~  236 (315)
T 3tnl_A          231 TNATGV  236 (315)
T ss_dssp             EECSST
T ss_pred             EECccC
Confidence            998754

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=95.47  E-value=0.018  Score=47.61  Aligned_cols=90  Identities=18%  Similarity=0.163  Sum_probs=55.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh--HHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~--~~~~~~~~~~~~d~vi~   78 (287)
                      +||+|.+|...++.+...|.+|+++++++.+.. .++        +  -+.+.+ .|..+.  +.+.. +...++|+||+
T Consensus       156 ~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~-~~~--------~--lGa~~~-i~~~~~~~~~~~~-~~~~~~d~vid  222 (328)
T 1xa0_A          156 TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD-YLR--------V--LGAKEV-LAREDVMAERIRP-LDKQRWAAAVD  222 (328)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHH-HHH--------H--TTCSEE-EECC----------CCSCCEEEEEE
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHH--------H--cCCcEE-EecCCcHHHHHHH-hcCCcccEEEE
Confidence            588999999999999999999999999866521 111        1  122221 233332  11222 22237999999


Q ss_pred             cCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           79 INGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +++.  ......++.++...+++.++.
T Consensus       223 ~~g~--~~~~~~~~~l~~~G~~v~~G~  247 (328)
T 1xa0_A          223 PVGG--RTLATVLSRMRYGGAVAVSGL  247 (328)
T ss_dssp             CSTT--TTHHHHHHTEEEEEEEEECSC
T ss_pred             CCcH--HHHHHHHHhhccCCEEEEEee
Confidence            9985  355666677664456776553

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=95.46  E-value=0.017  Score=50.05  Aligned_cols=91  Identities=13%  Similarity=0.126  Sum_probs=57.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeE-EEE---ecCCC----------------
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLK---GDRKD----------------   60 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~i~---~D~~d----------------   60 (287)
                      +||+|.+|...++.+...|.+|++++++..+.. .++        +  -+.+ .+.   .|+.+                
T Consensus       227 ~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~-~~~--------~--lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  295 (447)
T 4a0s_A          227 WGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEA-AVR--------A--LGCDLVINRAELGITDDIADDPRRVVETGRKL  295 (447)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH--------H--TTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH--------h--cCCCEEEecccccccccccccccccchhhhHH
Confidence            589999999999999999999999998765521 111        1  1221 111   11110                


Q ss_pred             hHHHHhhhhcCCccEEEecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        61 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      .+.+.+.. ..++|+||+++|.  ......++.++...+++.+++
T Consensus       296 ~~~v~~~~-g~g~Dvvid~~G~--~~~~~~~~~l~~~G~iv~~G~  337 (447)
T 4a0s_A          296 AKLVVEKA-GREPDIVFEHTGR--VTFGLSVIVARRGGTVVTCGS  337 (447)
T ss_dssp             HHHHHHHH-SSCCSEEEECSCH--HHHHHHHHHSCTTCEEEESCC
T ss_pred             HHHHHHHh-CCCceEEEECCCc--hHHHHHHHHHhcCCEEEEEec
Confidence            12333333 3479999999985  345566677775568887764

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=95.41  E-value=0.024  Score=45.90  Aligned_cols=81  Identities=16%  Similarity=0.042  Sum_probs=55.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|+....                ..++       ..+++.++++  ++|+|+.+...
T Consensus       129 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~-------~~~~l~ell~--~aDiV~l~~P~  183 (290)
T 3gvx_A          129 GYGGIGRRVAHLAKAFGMRVIAYTRSSVDQ----------------NVDV-------ISESPADLFR--QSDFVLIAIPL  183 (290)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSCCCT----------------TCSE-------ECSSHHHHHH--HCSEEEECCCC
T ss_pred             ccCchhHHHHHHHHhhCcEEEEEecccccc----------------cccc-------ccCChHHHhh--ccCeEEEEeec
Confidence            579999999999999999999999987552                1111       1224667777  78988877643


Q ss_pred             Cc--cc--HHHHHHhCCCCccEEEEeccee
Q 023110           83 EA--DE--VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~--~~--~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +.  ..  ....++.++...-+|.+|+..+
T Consensus       184 t~~t~~li~~~~l~~mk~gailIN~aRG~~  213 (290)
T 3gvx_A          184 TDKTRGMVNSRLLANARKNLTIVNVARADV  213 (290)
T ss_dssp             CTTTTTCBSHHHHTTCCTTCEEEECSCGGG
T ss_pred             cccchhhhhHHHHhhhhcCceEEEeehhcc
Confidence            21  11  2445666665567887776554

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=95.31  E-value=0.012  Score=49.83  Aligned_cols=91  Identities=14%  Similarity=0.132  Sum_probs=60.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|+ |.+|+.+++.+...|.+|++++|++..... +.+       .....+   ..+..+.+.+.+.+.  ++|+||.++
T Consensus       174 iG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~-~~~-------~~g~~~---~~~~~~~~~l~~~l~--~aDvVi~~~  239 (377)
T 2vhw_A          174 IGA-GTAGYNAARIANGMGATVTVLDINIDKLRQ-LDA-------EFCGRI---HTRYSSAYELEGAVK--RADLVIGAV  239 (377)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHH-------HTTTSS---EEEECCHHHHHHHHH--HCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHH-------hcCCee---EeccCCHHHHHHHHc--CCCEEEECC
Confidence            365 999999999999999999999998765211 100       001122   123345566778887  899999987


Q ss_pred             CCCcc-----cHHHHHHhCCCCccEEEEec
Q 023110           81 GREAD-----EVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~-----~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +....     -....++.++....+|.+|.
T Consensus       240 ~~p~~~t~~li~~~~l~~mk~g~~iV~va~  269 (377)
T 2vhw_A          240 LVPGAKAPKLVSNSLVAHMKPGAVLVDIAI  269 (377)
T ss_dssp             CCTTSCCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred             CcCCCCCcceecHHHHhcCCCCcEEEEEec
Confidence            65431     14556777775567888874

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=95.29  E-value=0.0075  Score=52.09  Aligned_cols=29  Identities=21%  Similarity=0.354  Sum_probs=26.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |+|++|..++..|.+.|++|++++|++..
T Consensus         7 G~G~vG~~~A~~la~~G~~V~~~d~~~~~   35 (436)
T 1mv8_A            7 GLGYVGAVCAGCLSARGHEVIGVDVSSTK   35 (436)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            58999999999999999999999998765

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=95.28  E-value=0.0035  Score=54.35  Aligned_cols=29  Identities=14%  Similarity=0.351  Sum_probs=26.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |+|++|..++..|.+.|++|++++|++..
T Consensus         9 G~G~vG~~lA~~La~~G~~V~~~D~~~~~   37 (450)
T 3gg2_A            9 GIGYVGLVSATCFAELGANVRCIDTDRNK   37 (450)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CcCHHHHHHHHHHHhcCCEEEEEECCHHH
Confidence            57999999999999999999999998765

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=95.19  E-value=0.018  Score=50.09  Aligned_cols=91  Identities=12%  Similarity=0.176  Sum_probs=57.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC-------------h------
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-------------Y------   61 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d-------------~------   61 (287)
                      +||+|.+|...++.+...|.+|+++++++.+.. .++        +  -+++.+ .|..+             .      
T Consensus       235 ~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~-~~~--------~--lGa~~v-i~~~~~d~~~~~~~~~~~~~~~~~~  302 (456)
T 3krt_A          235 WGASGGLGSYATQFALAGGANPICVVSSPQKAE-ICR--------A--MGAEAI-IDRNAEGYRFWKDENTQDPKEWKRF  302 (456)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH--------H--HTCCEE-EETTTTTCCSEEETTEECHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHH-HHH--------h--hCCcEE-EecCcCcccccccccccchHHHHHH
Confidence            589999999999999999999999998665421 111        1  122221 12211             1      


Q ss_pred             -HHHHhhhhcCCccEEEecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           62 -DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        62 -~~~~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                       +.+.++....++|+||+++|.  ......++.++...+++.+++
T Consensus       303 ~~~i~~~t~g~g~Dvvid~~G~--~~~~~~~~~l~~~G~iv~~G~  345 (456)
T 3krt_A          303 GKRIRELTGGEDIDIVFEHPGR--ETFGASVFVTRKGGTITTCAS  345 (456)
T ss_dssp             HHHHHHHHTSCCEEEEEECSCH--HHHHHHHHHEEEEEEEEESCC
T ss_pred             HHHHHHHhCCCCCcEEEEcCCc--hhHHHHHHHhhCCcEEEEEec
Confidence             334444433589999999884  455566666664457776654

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=95.18  E-value=0.0081  Score=48.30  Aligned_cols=28  Identities=18%  Similarity=0.099  Sum_probs=22.7

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcC
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRG   28 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~   28 (287)
                      +|++|.+|+.+++.+.+. +++++++...
T Consensus        11 ~Ga~G~mG~~~~~~~~~~~~~elva~~d~   39 (273)
T 1dih_A           11 AGAGGRMGRQLIQAALALEGVQLGAALER   39 (273)
T ss_dssp             TTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            589999999999998854 7888865543

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=95.11  E-value=0.012  Score=48.95  Aligned_cols=90  Identities=17%  Similarity=0.344  Sum_probs=56.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC-hHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d-~~~~~~~~~~~~~d~vi~~   79 (287)
                      +||+|.+|...++.+...|.+|+++ ++..+. +.++        +  .++..+. +-.+ .+.+.+.....++|+||++
T Consensus       157 ~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~-~~~~--------~--lGa~~i~-~~~~~~~~~~~~~~~~g~D~vid~  223 (343)
T 3gaz_A          157 QGGGGGVGHVAIQIALARGARVFAT-ARGSDL-EYVR--------D--LGATPID-ASREPEDYAAEHTAGQGFDLVYDT  223 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHH-HHHH--------H--HTSEEEE-TTSCHHHHHHHHHTTSCEEEEEES
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHH-HHHH--------H--cCCCEec-cCCCHHHHHHHHhcCCCceEEEEC
Confidence            4889999999999999999999998 554442 1111        1  2344432 2222 2333343333479999999


Q ss_pred             CCCCcccHHHHHHhCCCCccEEEEec
Q 023110           80 NGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        80 a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +|.  ......++.++...+++.++.
T Consensus       224 ~g~--~~~~~~~~~l~~~G~iv~~g~  247 (343)
T 3gaz_A          224 LGG--PVLDASFSAVKRFGHVVSCLG  247 (343)
T ss_dssp             SCT--HHHHHHHHHEEEEEEEEESCC
T ss_pred             CCc--HHHHHHHHHHhcCCeEEEEcc
Confidence            983  445566666664456765543

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=95.00  E-value=0.049  Score=44.86  Aligned_cols=83  Identities=13%  Similarity=0.080  Sum_probs=53.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|++...                ..+...    ....++.++++  ++|+|+.+...
T Consensus       147 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~~~----~~~~~l~ell~--~aDvV~l~lPl  204 (324)
T 3hg7_A          147 GTGSIGQHIAHTGKHFGMKVLGVSRSGRER----------------AGFDQV----YQLPALNKMLA--QADVIVSVLPA  204 (324)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCC----------------TTCSEE----ECGGGHHHHHH--TCSEEEECCCC
T ss_pred             EECHHHHHHHHHHHhCCCEEEEEcCChHHh----------------hhhhcc----cccCCHHHHHh--hCCEEEEeCCC
Confidence            679999999999999999999999987431                111111    12456778888  89998877543


Q ss_pred             CcccHHH-----HHHhCCCCccEEEEeccee
Q 023110           83 EADEVEP-----ILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~~~~~-----ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +. .+..     .+..++...-+|.+|...+
T Consensus       205 t~-~T~~li~~~~l~~mk~gailIN~aRG~~  234 (324)
T 3hg7_A          205 TR-ETHHLFTASRFEHCKPGAILFNVGRGNA  234 (324)
T ss_dssp             CS-SSTTSBCTTTTTCSCTTCEEEECSCGGG
T ss_pred             CH-HHHHHhHHHHHhcCCCCcEEEECCCchh
Confidence            21 1222     3333444456777776554

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=94.98  E-value=0.024  Score=46.76  Aligned_cols=29  Identities=28%  Similarity=0.465  Sum_probs=26.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|..+++.|.+.|++|++.+|++..
T Consensus        38 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~   66 (320)
T 4dll_A           38 GTGSMGLPMARRLCEAGYALQVWNRTPAR   66 (320)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CccHHHHHHHHHHHhCCCeEEEEcCCHHH
Confidence            57999999999999999999999998766

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=94.97  E-value=0.081  Score=43.91  Aligned_cols=82  Identities=16%  Similarity=0.167  Sum_probs=56.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|+....   ..           ..+.+.        ++.++++  ++|+|+.+...
T Consensus       155 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---~~-----------~~~~~~--------~l~ell~--~aDvV~l~~Pl  210 (343)
T 2yq5_A          155 GVGHIGSAVAEIFSAMGAKVIAYDVAYNPE---FE-----------PFLTYT--------DFDTVLK--EADIVSLHTPL  210 (343)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCGG---GT-----------TTCEEC--------CHHHHHH--HCSEEEECCCC
T ss_pred             ecCHHHHHHHHHHhhCCCEEEEECCChhhh---hh-----------cccccc--------CHHHHHh--cCCEEEEcCCC
Confidence            579999999999999999999999987541   11           122221        4667777  88998877553


Q ss_pred             Ccc----cHHHHHHhCCCCccEEEEeccee
Q 023110           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +..    -....+..++...-+|.+|...+
T Consensus       211 t~~t~~li~~~~l~~mk~gailIN~aRg~~  240 (343)
T 2yq5_A          211 FPSTENMIGEKQLKEMKKSAYLINCARGEL  240 (343)
T ss_dssp             CTTTTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred             CHHHHHHhhHHHHhhCCCCcEEEECCCChh
Confidence            211    12456677776678888887664

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=94.95  E-value=0.028  Score=46.84  Aligned_cols=91  Identities=11%  Similarity=0.008  Sum_probs=50.5

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      .||+|++|+.+++.|.+++ .+++++.+..+. ...+.+.. ..+    .+..  ...+.+.+   + +.  ++|+||.+
T Consensus        10 iGAtG~iG~~llr~L~~~p~~elv~v~s~~~~-g~~~~~~~-~~~----~g~~--~~~~~~~~---~-~~--~vDvV~~a   75 (345)
T 2ozp_A           10 VGASGYAGGEFLRLALSHPYLEVKQVTSRRFA-GEPVHFVH-PNL----RGRT--NLKFVPPE---K-LE--PADILVLA   75 (345)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTT-TSBGGGTC-GGG----TTTC--CCBCBCGG---G-CC--CCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHcCCCcEEEEEECchhh-CchhHHhC-chh----cCcc--cccccchh---H-hc--CCCEEEEc
Confidence            3899999999999999875 488887764322 11111100 000    0100  01122322   2 34  89999999


Q ss_pred             CCCCcccHHHHHHh-CCCCccEEEEecce
Q 023110           80 NGREADEVEPILDA-LPNLEQFIYCSSAG  107 (287)
Q Consensus        80 a~~~~~~~~~ll~~-~~~~~~~i~~Ss~~  107 (287)
                      ++...  ...++.. ++...++|-.|+..
T Consensus        76 ~g~~~--s~~~a~~~~~aG~~VId~Sa~~  102 (345)
T 2ozp_A           76 LPHGV--FAREFDRYSALAPVLVDLSADF  102 (345)
T ss_dssp             CCTTH--HHHTHHHHHTTCSEEEECSSTT
T ss_pred             CCcHH--HHHHHHHHHHCCCEEEEcCccc
Confidence            87543  3334433 33335688888853

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=94.92  E-value=0.03  Score=43.22  Aligned_cols=59  Identities=24%  Similarity=0.215  Sum_probs=42.1

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|.+|+.+++.|.+.|++|++.+|+...... +.          ..++...        ++.++++  ++|+||.+...
T Consensus        35 G~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~-~~----------~~g~~~~--------~~~~~~~--~~DvVi~av~~   93 (215)
T 2vns_A           35 GSGDFARSLATRLVGSGFKVVVGSRNPKRTAR-LF----------PSAAQVT--------FQEEAVS--SPEVIFVAVFR   93 (215)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESSHHHHHH-HS----------BTTSEEE--------EHHHHTT--SCSEEEECSCG
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----------HcCCcee--------cHHHHHh--CCCEEEECCCh
Confidence            38999999999999999999999998665321 11          1233321        2445666  89999988764

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=94.91  E-value=0.075  Score=42.04  Aligned_cols=103  Identities=11%  Similarity=0.097  Sum_probs=59.8

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCC-------CCh-------hhhhhhcCC--eEEEEecCCChHHHH
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG-------ESD-------QEFAEFSSK--ILHLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~-------~~~-------~~~~~~~~~--~~~i~~D~~d~~~~~   65 (287)
                      |.|-+|+++++.|...|. +|++++++.-.....-++       ...       ..+....+.  ++.+..++. .+.+.
T Consensus        38 G~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~~  116 (249)
T 1jw9_B           38 GLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLD-DAELA  116 (249)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC-HHHHH
T ss_pred             eeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccCC-HhHHH
Confidence            468899999999999996 889899876221100000       000       111111223  444455554 45567


Q ss_pred             hhhhcCCccEEEecCCCCcccHHHHHHhCC-CCccEEEEecceee
Q 023110           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVY  109 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~  109 (287)
                      +.++  ++|+||.+.. +...-..+.+++. ....+|..+..+.+
T Consensus       117 ~~~~--~~DvVi~~~d-~~~~~~~l~~~~~~~~~p~i~~~~~g~~  158 (249)
T 1jw9_B          117 ALIA--EHDLVLDCTD-NVAVRNQLNAGCFAAKVPLVSGAAIRME  158 (249)
T ss_dssp             HHHH--TSSEEEECCS-SHHHHHHHHHHHHHHTCCEEEEEEEBTE
T ss_pred             HHHh--CCCEEEEeCC-CHHHHHHHHHHHHHcCCCEEEeeeccce
Confidence            7788  8999999875 3333333444555 44677776554433

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=94.87  E-value=0.028  Score=47.09  Aligned_cols=93  Identities=20%  Similarity=0.296  Sum_probs=51.6

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      .||+|++|+.+++.|.+++ .+++++.+..+. ...+..    ....+...+   ..|+.-.+  .+.++  ++|+||.+
T Consensus        22 iGAtG~iG~~llr~L~~~p~~elvai~~~~~~-g~~~~~----~~~~~~~~v---~~dl~~~~--~~~~~--~vDvVf~a   89 (359)
T 1xyg_A           22 LGASGYTGAEIVRLLANHPHFQVTLMTADRKA-GQSMES----VFPHLRAQK---LPTLVSVK--DADFS--TVDAVFCC   89 (359)
T ss_dssp             ECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTT-TSCHHH----HCGGGTTSC---CCCCBCGG--GCCGG--GCSEEEEC
T ss_pred             ECcCCHHHHHHHHHHHcCCCcEEEEEeCchhc-CCCHHH----hCchhcCcc---cccceecc--hhHhc--CCCEEEEc
Confidence            3899999999999999875 488887764322 111100    000000111   12332222  33445  89999999


Q ss_pred             CCCCcccHHHHHHhCCCCccEEEEecce
Q 023110           80 NGREADEVEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        80 a~~~~~~~~~ll~~~~~~~~~i~~Ss~~  107 (287)
                      ++..  .+...+..++...++|-.|+..
T Consensus        90 tp~~--~s~~~a~~~~aG~~VId~sa~~  115 (359)
T 1xyg_A           90 LPHG--TTQEIIKELPTALKIVDLSADF  115 (359)
T ss_dssp             CCTT--THHHHHHTSCTTCEEEECSSTT
T ss_pred             CCch--hHHHHHHHHhCCCEEEECCccc
Confidence            8643  2344444445234688888753

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=94.86  E-value=0.068  Score=43.49  Aligned_cols=30  Identities=23%  Similarity=0.439  Sum_probs=26.8

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      ||.|.+|.++++.|.+.|++|++++|++..
T Consensus        28 Gg~G~mG~~la~~l~~~G~~V~~~~~~~~~   57 (298)
T 2pv7_A           28 GGYGKLGGLFARYLRASGYPISILDREDWA   57 (298)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             cCCCHHHHHHHHHHHhCCCeEEEEECCccc
Confidence            579999999999999999999999987643

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=94.84  E-value=0.02  Score=49.87  Aligned_cols=28  Identities=21%  Similarity=0.388  Sum_probs=26.8

Q ss_pred             cccchHHHHHHHHHHc-CC-eEEEEEcCCc
Q 023110            3 GTRFIGVFLSRLLVKE-GH-QVTLFTRGKA   30 (287)
Q Consensus         3 atG~iG~~l~~~l~~~-g~-~V~~~~r~~~   30 (287)
                      |+|++|..++..|.+. |+ +|+++++++.
T Consensus        25 GlG~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           25 GMGYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             CCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            6899999999999999 99 9999999988

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=94.81  E-value=0.021  Score=45.77  Aligned_cols=29  Identities=14%  Similarity=0.162  Sum_probs=23.6

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEE-EcCC
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGK   29 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~-~r~~   29 (287)
                      .|++|.+|+.+++.+.+. ++++++. +|+.
T Consensus        13 ~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A           13 AGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             SSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            489999999999999876 6788875 5554

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=94.78  E-value=0.019  Score=47.80  Aligned_cols=85  Identities=18%  Similarity=0.128  Sum_probs=47.6

Q ss_pred             CCcccchHHHHHHHHHHcCC---eEEEEEc-CCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~---~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      .||+|++|+.+++.|.++++   +++++.. +.....-.+            .+.+....|. +++    .++  ++|+|
T Consensus        12 iGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~------------~g~~i~~~~~-~~~----~~~--~~DvV   72 (340)
T 2hjs_A           12 VGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGF------------AESSLRVGDV-DSF----DFS--SVGLA   72 (340)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEE------------TTEEEECEEG-GGC----CGG--GCSEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCcccc------------CCcceEEecC-CHH----Hhc--CCCEE
Confidence            48999999999999997654   5565542 211100001            1122211222 222    245  89999


Q ss_pred             EecCCCCcccHHHHHHhCC--CCccEEEEecce
Q 023110           77 YDINGREADEVEPILDALP--NLEQFIYCSSAG  107 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~--~~~~~i~~Ss~~  107 (287)
                      |.+.+.  ......++.+.  +. ++|.+|+..
T Consensus        73 ~~a~g~--~~s~~~a~~~~~aG~-kvId~Sa~~  102 (340)
T 2hjs_A           73 FFAAAA--EVSRAHAERARAAGC-SVIDLSGAL  102 (340)
T ss_dssp             EECSCH--HHHHHHHHHHHHTTC-EEEETTCTT
T ss_pred             EEcCCc--HHHHHHHHHHHHCCC-EEEEeCCCC
Confidence            999863  33445555443  54 577778754

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=94.70  E-value=0.038  Score=46.36  Aligned_cols=89  Identities=17%  Similarity=0.166  Sum_probs=57.9

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCC--C-hHHHHhhhhcCCccEEEe
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--D-YDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~--d-~~~~~~~~~~~~~d~vi~   78 (287)
                      | +|.+|...++.+...|.+|+++++++.+.. ..+        +  -+++.+ .|-.  + .+.+.++....++|+||+
T Consensus       197 G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~--------~--lGa~~v-i~~~~~~~~~~v~~~~~g~g~D~vid  263 (363)
T 3uog_A          197 G-TGGVALFGLQIAKATGAEVIVTSSSREKLD-RAF--------A--LGADHG-INRLEEDWVERVYALTGDRGADHILE  263 (363)
T ss_dssp             S-SBHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHH--------H--HTCSEE-EETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred             C-CCHHHHHHHHHHHHcCCEEEEEecCchhHH-HHH--------H--cCCCEE-EcCCcccHHHHHHHHhCCCCceEEEE
Confidence            6 899999999999999999999998866521 111        1  122222 2321  1 233444444448999999


Q ss_pred             cCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           79 INGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ++|  .......++.++...+++.++.
T Consensus       264 ~~g--~~~~~~~~~~l~~~G~iv~~G~  288 (363)
T 3uog_A          264 IAG--GAGLGQSLKAVAPDGRISVIGV  288 (363)
T ss_dssp             ETT--SSCHHHHHHHEEEEEEEEEECC
T ss_pred             CCC--hHHHHHHHHHhhcCCEEEEEec
Confidence            998  4556677777774457776664

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=94.64  E-value=0.024  Score=47.25  Aligned_cols=91  Identities=14%  Similarity=0.092  Sum_probs=57.1

Q ss_pred             CCcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChH---HHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~~~~~d~v   76 (287)
                      +|+ |.+|..+++.+...|. +|+++++++.+.. ..+        +  -+++.+ .|..+.+   .+.++....++|+|
T Consensus       174 ~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~-~~~--------~--~Ga~~~-~~~~~~~~~~~v~~~~~g~g~D~v  240 (348)
T 2d8a_A          174 TGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRE-LAK--------K--VGADYV-INPFEEDVVKEVMDITDGNGVDVF  240 (348)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHH-HHH--------H--HTCSEE-ECTTTSCHHHHHHHHTTTSCEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHH--------H--hCCCEE-ECCCCcCHHHHHHHHcCCCCCCEE
Confidence            478 9999999999999999 9999999865521 111        1  122222 3444432   23333222379999


Q ss_pred             EecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      |++++. .......++.++...+++.+++
T Consensus       241 id~~g~-~~~~~~~~~~l~~~G~iv~~g~  268 (348)
T 2d8a_A          241 LEFSGA-PKALEQGLQAVTPAGRVSLLGL  268 (348)
T ss_dssp             EECSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred             EECCCC-HHHHHHHHHHHhcCCEEEEEcc
Confidence            999873 2345566677764457777664

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=94.59  E-value=0.02  Score=47.53  Aligned_cols=89  Identities=10%  Similarity=0.033  Sum_probs=56.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChH---HHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~~~~~d~vi   77 (287)
                      +|+ |.+|..+++.+...|.+|++++|++.+.. ..+          ..+++. ..|..+.+   .+.+..  .++|+||
T Consensus       171 ~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~----------~lGa~~-~~d~~~~~~~~~~~~~~--~~~d~vi  235 (339)
T 1rjw_A          171 YGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLE-LAK----------ELGADL-VVNPLKEDAAKFMKEKV--GGVHAAV  235 (339)
T ss_dssp             ECC-STTHHHHHHHHHHTTCEEEEECSCHHHHH-HHH----------HTTCSE-EECTTTSCHHHHHHHHH--SSEEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH----------HCCCCE-EecCCCccHHHHHHHHh--CCCCEEE
Confidence            477 66999999999999999999998866521 111          112222 24554432   233333  3899999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ++++. .......++.++...+++.+++
T Consensus       236 d~~g~-~~~~~~~~~~l~~~G~~v~~g~  262 (339)
T 1rjw_A          236 VTAVS-KPAFQSAYNSIRRGGACVLVGL  262 (339)
T ss_dssp             ESSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCC-HHHHHHHHHHhhcCCEEEEecc
Confidence            99874 2345566677763347776654

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=94.58  E-value=0.032  Score=45.76  Aligned_cols=29  Identities=31%  Similarity=0.488  Sum_probs=26.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|..+++.|.+.|++|++.+|++..
T Consensus        28 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~   56 (310)
T 3doj_A           28 GLGIMGKAMSMNLLKNGFKVTVWNRTLSK   56 (310)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred             CccHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            57999999999999999999999998776

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=94.57  E-value=0.075  Score=43.14  Aligned_cols=84  Identities=17%  Similarity=0.186  Sum_probs=55.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|++.+|+..... .+.          ..+++.+     +.+++.++++  ++|+|+.+...
T Consensus       162 G~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~-~~~----------~~g~~~~-----~~~~l~~~l~--~aDvVi~~~p~  223 (293)
T 3d4o_A          162 GLGRVGMSVARKFAALGAKVKVGARESDLLA-RIA----------EMGMEPF-----HISKAAQELR--DVDVCINTIPA  223 (293)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH----------HTTSEEE-----EGGGHHHHTT--TCSEEEECCSS
T ss_pred             eeCHHHHHHHHHHHhCCCEEEEEECCHHHHH-HHH----------HCCCeec-----ChhhHHHHhc--CCCEEEECCCh
Confidence            4699999999999999999999999865421 110          1133332     1235667777  89999988765


Q ss_pred             CcccHHHHHHhCCCCccEEEEec
Q 023110           83 EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      .... ...++.++....+|.++.
T Consensus       224 ~~i~-~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          224 LVVT-ANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             CCBC-HHHHHHSCTTCEEEECSS
T ss_pred             HHhC-HHHHHhcCCCCEEEEecC
Confidence            3322 345667775456666653

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=94.54  E-value=0.018  Score=48.18  Aligned_cols=87  Identities=10%  Similarity=0.084  Sum_probs=47.9

Q ss_pred             CCcccchHHHHHHHHHHcCC---eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      .||||++|+.|++.|.++++   ++..+....+. -+.+.          ..+.+...-++. .+    .++  ++|+||
T Consensus         8 vGATG~vG~eLlrlL~~~~~p~~el~~~as~~sa-G~~~~----------~~~~~~~~~~~~-~~----~~~--~~Dvvf   69 (366)
T 3pwk_A            8 VGATGAVGAQMIKMLEESTLPIDKIRYLASARSA-GKSLK----------FKDQDITIEETT-ET----AFE--GVDIAL   69 (366)
T ss_dssp             ETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTT-TCEEE----------ETTEEEEEEECC-TT----TTT--TCSEEE
T ss_pred             ECCCChHHHHHHHHHhcCCCCcEEEEEEEccccC-CCcce----------ecCCCceEeeCC-HH----Hhc--CCCEEE
Confidence            49999999999998888765   34444322211 01110          011222222222 21    234  899999


Q ss_pred             ecCCCCcccHHHHHHhCC-CCccEEEEecce
Q 023110           78 DINGREADEVEPILDALP-NLEQFIYCSSAG  107 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~  107 (287)
                      .+++  .......+..+. ...++|-.|+..
T Consensus        70 ~a~~--~~~s~~~a~~~~~~G~~vIDlSa~~   98 (366)
T 3pwk_A           70 FSAG--SSTSAKYAPYAVKAGVVVVDNTSYF   98 (366)
T ss_dssp             ECSC--HHHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ECCC--hHhHHHHHHHHHHCCCEEEEcCCcc
Confidence            9986  333444444432 334788888764

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=94.53  E-value=0.082  Score=43.32  Aligned_cols=79  Identities=16%  Similarity=0.125  Sum_probs=52.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|+....                .      .+   ..++.++++  ++|+|+.+...
T Consensus       151 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~----------------~------~~---~~~l~ell~--~aDvV~l~~p~  203 (311)
T 2cuk_A          151 GMGRIGQAVAKRALAFGMRVVYHARTPKPL----------------P------YP---FLSLEELLK--EADVVSLHTPL  203 (311)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSS----------------S------SC---BCCHHHHHH--HCSEEEECCCC
T ss_pred             EECHHHHHHHHHHHHCCCEEEEECCCCccc----------------c------cc---cCCHHHHHh--hCCEEEEeCCC
Confidence            579999999999999999999999886541                1      11   223556777  78988877543


Q ss_pred             Cc--cc--HHHHHHhCCCCccEEEEeccee
Q 023110           83 EA--DE--VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~--~~--~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      ..  ..  ....+..++...-+|.+|+..+
T Consensus       204 ~~~t~~li~~~~l~~mk~ga~lin~srg~~  233 (311)
T 2cuk_A          204 TPETHRLLNRERLFAMKRGAILLNTARGAL  233 (311)
T ss_dssp             CTTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred             ChHHHhhcCHHHHhhCCCCcEEEECCCCCc
Confidence            21  11  1235555655566777776443

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=94.49  E-value=0.11  Score=43.17  Aligned_cols=81  Identities=17%  Similarity=0.080  Sum_probs=51.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|++...                ..+..       ..++.++++  ++|+|+.+...
T Consensus       178 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~~-------~~sl~ell~--~aDvVil~vP~  232 (340)
T 4dgs_A          178 GLGQIGRALASRAEAFGMSVRYWNRSTLSG----------------VDWIA-------HQSPVDLAR--DSDVLAVCVAA  232 (340)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSCCTT----------------SCCEE-------CSSHHHHHH--TCSEEEECC--
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCcccc----------------cCcee-------cCCHHHHHh--cCCEEEEeCCC
Confidence            569999999999999999999999886541                11111       124667777  89998876542


Q ss_pred             Cc--cc--HHHHHHhCCCCccEEEEeccee
Q 023110           83 EA--DE--VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~--~~--~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +.  ..  ....++.++...-+|.+|...+
T Consensus       233 t~~t~~li~~~~l~~mk~gailIN~aRG~v  262 (340)
T 4dgs_A          233 SAATQNIVDASLLQALGPEGIVVNVARGNV  262 (340)
T ss_dssp             --------CHHHHHHTTTTCEEEECSCC--
T ss_pred             CHHHHHHhhHHHHhcCCCCCEEEECCCCcc
Confidence            21  11  1345566665567887776655

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.47  E-value=0.027  Score=47.14  Aligned_cols=29  Identities=24%  Similarity=0.371  Sum_probs=26.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|..+++.|.+.|++|++.+|++..
T Consensus        29 GlG~mG~~~A~~L~~~G~~V~v~dr~~~~   57 (358)
T 4e21_A           29 GLGRMGADMVRRLRKGGHECVVYDLNVNA   57 (358)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CchHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence            57999999999999999999999998765

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=94.40  E-value=0.36  Score=38.13  Aligned_cols=104  Identities=17%  Similarity=0.136  Sum_probs=59.7

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCC-------CCh-------hhhhhhcCCeE--EEEecCCChHHHH
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG-------ESD-------QEFAEFSSKIL--HLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~-------~~~-------~~~~~~~~~~~--~i~~D~~d~~~~~   65 (287)
                      |.|-+|+++++.|...|. ++++++++.-.....-++       ...       ..+....+.++  .+..++ +.+.+.
T Consensus        35 G~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~-~~~~~~  113 (251)
T 1zud_1           35 GLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL-TGEALK  113 (251)
T ss_dssp             CCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC-CHHHHH
T ss_pred             ccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC-CHHHHH
Confidence            457799999999999996 777777764221111111       000       11122223443  333333 445677


Q ss_pred             hhhhcCCccEEEecCCCCcccHHHHHHhCC-CCccEEEEecceeec
Q 023110           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~  110 (287)
                      ++++  ++|+||++.. +...-..+.++|. ..+.+|..+..+.+|
T Consensus       114 ~~~~--~~DvVi~~~d-~~~~r~~l~~~~~~~~~p~i~~~~~g~~G  156 (251)
T 1zud_1          114 DAVA--RADVVLDCTD-NMATRQEINAACVALNTPLITASAVGFGG  156 (251)
T ss_dssp             HHHH--HCSEEEECCS-SHHHHHHHHHHHHHTTCCEEEEEEEBTEE
T ss_pred             HHHh--cCCEEEECCC-CHHHHHHHHHHHHHhCCCEEEEeccccce
Confidence            8888  8999999875 3333333444455 556788777655444

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=94.35  E-value=0.051  Score=45.64  Aligned_cols=90  Identities=11%  Similarity=0.042  Sum_probs=59.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecC------------------CChHHH
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR------------------KDYDFV   64 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~------------------~d~~~~   64 (287)
                      |.|-+|...++.+...|.+|++++|++.... .+.          .-+.+++..+.                  .+.+.+
T Consensus       191 G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~-~~~----------~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l  259 (381)
T 3p2y_A          191 GVGVAGLQALATAKRLGAKTTGYDVRPEVAE-QVR----------SVGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL  259 (381)
T ss_dssp             SCSHHHHHHHHHHHHHTCEEEEECSSGGGHH-HHH----------HTTCEECCCC-------------CHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH----------HcCCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence            4599999999999999999999999976522 111          01333332211                  123467


Q ss_pred             HhhhhcCCccEEEecCCCC-----cccHHHHHHhCCCCccEEEEec
Q 023110           65 KSSLSAKGFDVVYDINGRE-----ADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        65 ~~~~~~~~~d~vi~~a~~~-----~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      .+.++  ++|+||.++...     ..-+..+++.++...-+|-+|.
T Consensus       260 ~e~l~--~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~  303 (381)
T 3p2y_A          260 EDAIT--KFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAG  303 (381)
T ss_dssp             HHHHT--TCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred             HHHHh--cCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeC
Confidence            77787  999999886432     2236788888885556666664

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=94.34  E-value=0.047  Score=44.91  Aligned_cols=90  Identities=17%  Similarity=0.162  Sum_probs=55.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|.+|...++.+...|.+|+++++++.+.. .++        ++  +.+.+ .|..+.+.+ ..+...++|+||++.
T Consensus       153 ~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~-~~~--------~l--Ga~~v-i~~~~~~~~-~~~~~~~~d~v~d~~  219 (324)
T 3nx4_A          153 TGASGGVGSTAVALLHKLGYQVAAVSGRESTHG-YLK--------SL--GANRI-LSRDEFAES-RPLEKQLWAGAIDTV  219 (324)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH-HHH--------HH--TCSEE-EEGGGSSCC-CSSCCCCEEEEEESS
T ss_pred             ECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH--------hc--CCCEE-EecCCHHHH-HhhcCCCccEEEECC
Confidence            589999999999999999999999998876521 111        11  22221 133222221 122224799999998


Q ss_pred             CCCcccHHHHHHhCCCCccEEEEec
Q 023110           81 GREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      |.  ......++.++...+++.++.
T Consensus       220 g~--~~~~~~~~~l~~~G~iv~~G~  242 (324)
T 3nx4_A          220 GD--KVLAKVLAQMNYGGCVAACGL  242 (324)
T ss_dssp             CH--HHHHHHHHTEEEEEEEEECCC
T ss_pred             Cc--HHHHHHHHHHhcCCEEEEEec
Confidence            74  345556666664457776653

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=94.31  E-value=0.1  Score=43.97  Aligned_cols=61  Identities=13%  Similarity=0.126  Sum_probs=47.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |.|.+|+.+++.+.+.|++|++++.++......+             .-+++..|..|.+.+.++.+  .+|+|..
T Consensus        19 G~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~-------------ad~~~~~~~~d~~~l~~~~~--~~dvi~~   79 (377)
T 3orq_A           19 GGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV-------------AHEFIQAKYDDEKALNQLGQ--KCDVITY   79 (377)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG-------------SSEEEECCTTCHHHHHHHHH--HCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhh-------------CCEEEECCCCCHHHHHHHHH--hCCccee
Confidence            4688999999999999999999988765432222             12467789999999999998  6888765

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=94.31  E-value=0.11  Score=42.30  Aligned_cols=80  Identities=18%  Similarity=0.122  Sum_probs=53.1

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|+... .                +       .....++.++++  ++|+|+.+...
T Consensus       131 G~G~IG~~~A~~l~~~G~~V~~~dr~~~~-~----------------~-------~~~~~~l~ell~--~aDvV~l~~P~  184 (303)
T 1qp8_A          131 GLGEIGTRVGKILAALGAQVRGFSRTPKE-G----------------P-------WRFTNSLEEALR--EARAAVCALPL  184 (303)
T ss_dssp             SCSTHHHHHHHHHHHTTCEEEEECSSCCC-S----------------S-------SCCBSCSHHHHT--TCSEEEECCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCccc-c----------------C-------cccCCCHHHHHh--hCCEEEEeCcC
Confidence            57999999999999999999999987651 0                0       011123456677  88988877543


Q ss_pred             Cc--cc--HHHHHHhCCCCccEEEEeccee
Q 023110           83 EA--DE--VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~--~~--~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +.  ..  ....+..++...-+|.+|+..+
T Consensus       185 ~~~t~~~i~~~~l~~mk~gailin~srg~~  214 (303)
T 1qp8_A          185 NKHTRGLVKYQHLALMAEDAVFVNVGRAEV  214 (303)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred             chHHHHHhCHHHHhhCCCCCEEEECCCCcc
Confidence            21  11  1345666665567888887543

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=94.23  E-value=0.029  Score=47.11  Aligned_cols=87  Identities=21%  Similarity=0.265  Sum_probs=55.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCC---ccccccCCCCChhhhhhhcCCeEEEEecCCC--hHHHHhhhhcCCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d--~~~~~~~~~~~~~d~   75 (287)
                      +|+ |.+|..+++.+...|.+|++++++.   .+. +...          .-+++.+  | .+  .+.+.+ .. .++|+
T Consensus       187 ~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~----------~~ga~~v--~-~~~~~~~~~~-~~-~~~d~  249 (366)
T 2cdc_A          187 VGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIE----------ETKTNYY--N-SSNGYDKLKD-SV-GKFDV  249 (366)
T ss_dssp             ESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHH----------HHTCEEE--E-CTTCSHHHHH-HH-CCEEE
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHH----------HhCCcee--c-hHHHHHHHHH-hC-CCCCE
Confidence            488 9999999999999999999999987   442 1111          1234444  4 43  223333 22 47999


Q ss_pred             EEecCCCCcccH-HHHHHhCCCCccEEEEec
Q 023110           76 VYDINGREADEV-EPILDALPNLEQFIYCSS  105 (287)
Q Consensus        76 vi~~a~~~~~~~-~~ll~~~~~~~~~i~~Ss  105 (287)
                      ||++++.. ... ...++.++...+++.++.
T Consensus       250 vid~~g~~-~~~~~~~~~~l~~~G~iv~~g~  279 (366)
T 2cdc_A          250 IIDATGAD-VNILGNVIPLLGRNGVLGLFGF  279 (366)
T ss_dssp             EEECCCCC-THHHHHHGGGEEEEEEEEECSC
T ss_pred             EEECCCCh-HHHHHHHHHHHhcCCEEEEEec
Confidence            99999853 223 455566653347776653

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=94.20  E-value=0.08  Score=43.11  Aligned_cols=84  Identities=15%  Similarity=0.226  Sum_probs=54.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|++.+|+..... .+.          ..+++.+.     .+++.++++  ++|+|+.+...
T Consensus       164 G~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~-~~~----------~~g~~~~~-----~~~l~~~l~--~aDvVi~~~p~  225 (300)
T 2rir_A          164 GLGRTGMTIARTFAALGANVKVGARSSAHLA-RIT----------EMGLVPFH-----TDELKEHVK--DIDICINTIPS  225 (300)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH----------HTTCEEEE-----GGGHHHHST--TCSEEEECCSS
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHH----------HCCCeEEc-----hhhHHHHhh--CCCEEEECCCh
Confidence            4699999999999999999999999865421 110          01333221     235677777  89999988765


Q ss_pred             CcccHHHHHHhCCCCccEEEEec
Q 023110           83 EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      .... ...++.++....+|.++.
T Consensus       226 ~~i~-~~~~~~mk~g~~lin~a~  247 (300)
T 2rir_A          226 MILN-QTVLSSMTPKTLILDLAS  247 (300)
T ss_dssp             CCBC-HHHHTTSCTTCEEEECSS
T ss_pred             hhhC-HHHHHhCCCCCEEEEEeC
Confidence            4332 335555664456665553

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=94.20  E-value=0.029  Score=45.41  Aligned_cols=29  Identities=31%  Similarity=0.497  Sum_probs=27.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|..+++.|.+.|++|++.+|++..
T Consensus         8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~   36 (287)
T 3pdu_A            8 GLGIMGGPMAANLVRAGFDVTVWNRNPAK   36 (287)
T ss_dssp             CCSTTHHHHHHHHHHHTCCEEEECSSGGG
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            58999999999999999999999998776

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=94.20  E-value=0.16  Score=42.25  Aligned_cols=84  Identities=15%  Similarity=0.107  Sum_probs=55.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|+......             ..++.++       +++.++++  ++|+|+.+...
T Consensus       180 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-------------~~g~~~~-------~~l~ell~--~sDvV~l~~Pl  237 (345)
T 4g2n_A          180 GMGRIGRAIATRARGFGLAIHYHNRTRLSHAL-------------EEGAIYH-------DTLDSLLG--ASDIFLIAAPG  237 (345)
T ss_dssp             SCSHHHHHHHHHHHTTTCEEEEECSSCCCHHH-------------HTTCEEC-------SSHHHHHH--TCSEEEECSCC
T ss_pred             EeChhHHHHHHHHHHCCCEEEEECCCCcchhh-------------hcCCeEe-------CCHHHHHh--hCCEEEEecCC
Confidence            57999999999999999999999998643110             0122221       24667777  88988876543


Q ss_pred             Ccc----cHHHHHHhCCCCccEEEEeccee
Q 023110           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +..    -....+..++...-||.+|...+
T Consensus       238 t~~T~~li~~~~l~~mk~gailIN~aRG~~  267 (345)
T 4g2n_A          238 RPELKGFLDHDRIAKIPEGAVVINISRGDL  267 (345)
T ss_dssp             CGGGTTCBCHHHHHHSCTTEEEEECSCGGG
T ss_pred             CHHHHHHhCHHHHhhCCCCcEEEECCCCch
Confidence            211    12456666776567777776554

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=94.11  E-value=0.024  Score=47.03  Aligned_cols=87  Identities=10%  Similarity=0.001  Sum_probs=49.0

Q ss_pred             CCcccchHHHHHHHHHHcC---CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      .||+|++|+.+++.|.+++   .+++++....+. .+.+.          ..+.+....+. +++    .++  ++|+||
T Consensus         9 ~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~-G~~~~----------~~~~~i~~~~~-~~~----~~~--~vDvVf   70 (336)
T 2r00_A            9 FGATGAVGETMLEVLQEREFPVDELFLLASERSE-GKTYR----------FNGKTVRVQNV-EEF----DWS--QVHIAL   70 (336)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTT-TCEEE----------ETTEEEEEEEG-GGC----CGG--GCSEEE
T ss_pred             ECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCC-CCcee----------ecCceeEEecC-ChH----Hhc--CCCEEE
Confidence            3899999999999999873   567777632111 00000          01122222222 222    234  799999


Q ss_pred             ecCCCCcccHHHHHHhCC-CCccEEEEecce
Q 023110           78 DINGREADEVEPILDALP-NLEQFIYCSSAG  107 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~  107 (287)
                      .+.+.  ......+..+. ...++|-.|+..
T Consensus        71 ~a~g~--~~s~~~a~~~~~~G~~vId~s~~~   99 (336)
T 2r00_A           71 FSAGG--ELSAKWAPIAAEAGVVVIDNTSHF   99 (336)
T ss_dssp             ECSCH--HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ECCCc--hHHHHHHHHHHHcCCEEEEcCCcc
Confidence            99863  33444444433 334788888764

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=94.07  E-value=0.1  Score=44.40  Aligned_cols=62  Identities=23%  Similarity=0.249  Sum_probs=47.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |+|.+|+.+++.+.+.|++|++++ ++......+.           +....+.+|..|.+.+.++.+  .+|+|+.
T Consensus        31 GgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~a-----------d~~~~~~~~~~d~~~l~~~a~--~~d~i~~   92 (403)
T 3k5i_A           31 GGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQIS-----------AHDGHVTGSFKEREAVRQLAK--TCDVVTA   92 (403)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGC-----------CSSCCEESCTTCHHHHHHHHT--TCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhc-----------cccceeecCCCCHHHHHHHHH--hCCEEEE
Confidence            458999999999999999999999 6544332322           223457889999999999998  7888764

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=94.01  E-value=0.35  Score=40.36  Aligned_cols=94  Identities=11%  Similarity=0.075  Sum_probs=58.2

Q ss_pred             CCcccchHHHHHHHHHHcCCe-EEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhh----hcCCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL----SAKGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~----~~~~~d~   75 (287)
                      +|+ |.+|...++.+...|.+ |+++++++.+.. ..        .++.+.+..+..|-.+.+++.+.+    ...++|+
T Consensus       186 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a--------~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dv  255 (363)
T 3m6i_A          186 CGA-GPIGLITMLCAKAAGACPLVITDIDEGRLK-FA--------KEICPEVVTHKVERLSAEESAKKIVESFGGIEPAV  255 (363)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHH-HH--------HHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HH--------HHhchhcccccccccchHHHHHHHHHHhCCCCCCE
Confidence            376 99999999999999987 888888766521 11        111123322333333334443333    2347999


Q ss_pred             EEecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           76 VYDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        76 vi~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ||++.|. .......++.++...+++.++.
T Consensus       256 vid~~g~-~~~~~~~~~~l~~~G~iv~~G~  284 (363)
T 3m6i_A          256 ALECTGV-ESSIAAAIWAVKFGGKVFVIGV  284 (363)
T ss_dssp             EEECSCC-HHHHHHHHHHSCTTCEEEECCC
T ss_pred             EEECCCC-hHHHHHHHHHhcCCCEEEEEcc
Confidence            9999873 2245667777775568876653

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=93.99  E-value=0.19  Score=41.60  Aligned_cols=80  Identities=19%  Similarity=0.195  Sum_probs=52.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|++|++.+|+....                .++..       ..++.++++  ++|+|+.+...
T Consensus       171 G~G~iG~~vA~~l~~~G~~V~~~dr~~~~~----------------~g~~~-------~~~l~ell~--~aDvVil~vP~  225 (333)
T 3ba1_A          171 GLGRIGLAVAERAEAFDCPISYFSRSKKPN----------------TNYTY-------YGSVVELAS--NSDILVVACPL  225 (333)
T ss_dssp             CCSHHHHHHHHHHHTTTCCEEEECSSCCTT----------------CCSEE-------ESCHHHHHH--TCSEEEECSCC
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCchhc----------------cCcee-------cCCHHHHHh--cCCEEEEecCC
Confidence            579999999999999999999999886541                12211       123556677  89998877654


Q ss_pred             Cc--ccH--HHHHHhCCCCccEEEEecce
Q 023110           83 EA--DEV--EPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~--~~~--~~ll~~~~~~~~~i~~Ss~~  107 (287)
                      ..  ...  ...++.++...-+|.+|+..
T Consensus       226 ~~~t~~li~~~~l~~mk~gailIn~srG~  254 (333)
T 3ba1_A          226 TPETTHIINREVIDALGPKGVLINIGRGP  254 (333)
T ss_dssp             CGGGTTCBCHHHHHHHCTTCEEEECSCGG
T ss_pred             ChHHHHHhhHHHHhcCCCCCEEEECCCCc
Confidence            31  111  24556666445666666544

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=93.98  E-value=0.11  Score=44.08  Aligned_cols=90  Identities=12%  Similarity=0.041  Sum_probs=59.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEec----------------CCC------
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD----------------RKD------   60 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D----------------~~d------   60 (287)
                      |.|-+|...++.+...|.+|+++++++.... .+.        .  -+.+++..+                +.+      
T Consensus       197 G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~-~~~--------~--~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~  265 (405)
T 4dio_A          197 GAGVAGLQAIATARRLGAVVSATDVRPAAKE-QVA--------S--LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQ  265 (405)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSTTHHH-HHH--------H--TTCEECCCCC-----------------CHHHHHH
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHH--------H--cCCceeecccccccccccccchhhhcchhhhhhh
Confidence            4599999999999999999999999987521 111        0  122222221                222      


Q ss_pred             hHHHHhhhhcCCccEEEecCCCC-----cccHHHHHHhCCCCccEEEEec
Q 023110           61 YDFVKSSLSAKGFDVVYDINGRE-----ADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        61 ~~~~~~~~~~~~~d~vi~~a~~~-----~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ...+.++++  ++|+||.++...     ..-+..+++.++...-+|-+|.
T Consensus       266 ~~~l~e~l~--~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~  313 (405)
T 4dio_A          266 AALVAEHIA--KQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV  313 (405)
T ss_dssp             HHHHHHHHH--TCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred             HhHHHHHhc--CCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence            346788888  999999986432     2236778888885556666664

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=93.97  E-value=0.04  Score=44.52  Aligned_cols=29  Identities=21%  Similarity=0.268  Sum_probs=26.5

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |+|.+|+.+++.|.+.|++|++.+|++..
T Consensus        11 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   39 (283)
T 4e12_A           11 GTGVLGSQIAFQTAFHGFAVTAYDINTDA   39 (283)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            56999999999999999999999998765

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=93.96  E-value=0.05  Score=44.64  Aligned_cols=27  Identities=11%  Similarity=0.144  Sum_probs=25.0

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCC
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGK   29 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~   29 (287)
                      |.|.+|..+++.|.+.|+ +|++.+|++
T Consensus        31 G~G~mG~~~A~~L~~~G~~~V~~~dr~~   58 (312)
T 3qsg_A           31 GFGEAASAIASGLRQAGAIDMAAYDAAS   58 (312)
T ss_dssp             CCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred             CccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence            579999999999999999 999999974

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=93.91  E-value=0.074  Score=44.24  Aligned_cols=92  Identities=14%  Similarity=0.154  Sum_probs=55.4

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHH---HHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~---~~~~~~~~~~d~v   76 (287)
                      +|++|.+|..+++.+... |.+|+++++++.... ..+        +.  +... ..|..+.+.   +.++....++|+|
T Consensus       177 ~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~-~~~--------~~--g~~~-~~~~~~~~~~~~~~~~~~~~~~d~v  244 (347)
T 1jvb_A          177 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVE-AAK--------RA--GADY-VINASMQDPLAEIRRITESKGVDAV  244 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHH-HHH--------HH--TCSE-EEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             ECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHH--------Hh--CCCE-EecCCCccHHHHHHHHhcCCCceEE
Confidence            588889999999999999 999999998865521 111        11  2221 235544433   3333321279999


Q ss_pred             EecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      |+++|.. ......++.++...+++.++.
T Consensus       245 i~~~g~~-~~~~~~~~~l~~~G~iv~~g~  272 (347)
T 1jvb_A          245 IDLNNSE-KTLSVYPKALAKQGKYVMVGL  272 (347)
T ss_dssp             EESCCCH-HHHTTGGGGEEEEEEEEECCS
T ss_pred             EECCCCH-HHHHHHHHHHhcCCEEEEECC
Confidence            9998842 123334444443346766553

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=93.91  E-value=0.059  Score=44.91  Aligned_cols=86  Identities=13%  Similarity=0.059  Sum_probs=56.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|+...... ..          ..+++.+       +++.++++  ++|+|+.+...
T Consensus       171 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-~~----------~~g~~~~-------~~l~ell~--~aDvV~l~~Pl  230 (351)
T 3jtm_A          171 GAGRIGKLLLQRLKPFGCNLLYHDRLQMAPEL-EK----------ETGAKFV-------EDLNEMLP--KCDVIVINMPL  230 (351)
T ss_dssp             CCSHHHHHHHHHHGGGCCEEEEECSSCCCHHH-HH----------HHCCEEC-------SCHHHHGG--GCSEEEECSCC
T ss_pred             EeCHHHHHHHHHHHHCCCEEEEeCCCccCHHH-HH----------hCCCeEc-------CCHHHHHh--cCCEEEECCCC
Confidence            57899999999999999999999988643110 00          0122221       24667787  78988876543


Q ss_pred             Ccc----cHHHHHHhCCCCccEEEEeccee
Q 023110           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +..    -....+..++...-+|.+|...+
T Consensus       231 t~~t~~li~~~~l~~mk~gailIN~aRG~~  260 (351)
T 3jtm_A          231 TEKTRGMFNKELIGKLKKGVLIVNNARGAI  260 (351)
T ss_dssp             CTTTTTCBSHHHHHHSCTTEEEEECSCGGG
T ss_pred             CHHHHHhhcHHHHhcCCCCCEEEECcCchh
Confidence            211    12456677776667887776554

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=93.90  E-value=0.39  Score=39.91  Aligned_cols=90  Identities=11%  Similarity=0.008  Sum_probs=56.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC----hHHHHhhhh---cCCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLS---AKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d----~~~~~~~~~---~~~~   73 (287)
                      +|+ |.+|...++.+...|.+|+++++++.+.. .++          .-+++. ..|..+    .+.+.+...   ..++
T Consensus       175 ~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~----------~lGa~~-~~~~~~~~~~~~~i~~~~~~~~g~g~  241 (352)
T 1e3j_A          175 IGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLE-VAK----------NCGADV-TLVVDPAKEEESSIIERIRSAIGDLP  241 (352)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHH----------HTTCSE-EEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             ECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHH----------HhCCCE-EEcCcccccHHHHHHHHhccccCCCC
Confidence            365 89999999999989999999988766521 111          012221 123332    334444432   2479


Q ss_pred             cEEEecCCCCcccHHHHHHhCCCCccEEEEe
Q 023110           74 DVVYDINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        74 d~vi~~a~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      |+||++++.. ......++.++...+++.++
T Consensus       242 D~vid~~g~~-~~~~~~~~~l~~~G~iv~~G  271 (352)
T 1e3j_A          242 NVTIDCSGNE-KCITIGINITRTGGTLMLVG  271 (352)
T ss_dssp             SEEEECSCCH-HHHHHHHHHSCTTCEEEECS
T ss_pred             CEEEECCCCH-HHHHHHHHHHhcCCEEEEEe
Confidence            9999998742 23456677777555787665

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=93.90  E-value=0.0038  Score=51.93  Aligned_cols=72  Identities=10%  Similarity=0.047  Sum_probs=42.7

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      +|++|++|+.++..++..|  .+|++++.+.........++...  ......+.       -..+..+.++  ++|+||.
T Consensus        14 iGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~-------~t~d~~~al~--dADvVvi   82 (343)
T 3fi9_A           14 VGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLT-------FTSDIKEALT--DAKYIVS   82 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH--CCTTCCCE-------EESCHHHHHT--TEEEEEE
T ss_pred             ECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC--cCCCCceE-------EcCCHHHHhC--CCCEEEE
Confidence            4888999999999999988  58999998754321100000000  00001121       1123456677  9999999


Q ss_pred             cCCCC
Q 023110           79 INGRE   83 (287)
Q Consensus        79 ~a~~~   83 (287)
                      ++|..
T Consensus        83 taG~p   87 (343)
T 3fi9_A           83 SGGAP   87 (343)
T ss_dssp             CCC--
T ss_pred             ccCCC
Confidence            99874

>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*

Probab=93.85  E-value=0.089  Score=45.14  Aligned_cols=30  Identities=27%  Similarity=0.354  Sum_probs=27.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~   32 (287)
                      |.|++|..++..|.+.||+|+++++++...
T Consensus        18 GlGyvGlp~A~~La~~G~~V~~~D~~~~kv   47 (431)
T 3ojo_A           18 GLGYIGLPTSIMFAKHGVDVLGVDINQQTI   47 (431)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            689999999999999999999999998763

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=93.83  E-value=0.049  Score=45.83  Aligned_cols=88  Identities=15%  Similarity=0.137  Sum_probs=56.5

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |+ |-+|...++.+...|.+|+++++++.+.. ..+        +  -+++. ..|..+.+.+.++..  ++|+||++++
T Consensus       202 Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~-~a~--------~--lGa~~-vi~~~~~~~~~~~~~--g~Dvvid~~g  266 (369)
T 1uuf_A          202 GI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAK--------A--LGADE-VVNSRNADEMAAHLK--SFDFILNTVA  266 (369)
T ss_dssp             CC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHH--------H--HTCSE-EEETTCHHHHHTTTT--CEEEEEECCS
T ss_pred             CC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH--------H--cCCcE-EeccccHHHHHHhhc--CCCEEEECCC
Confidence            66 77999999999889999999998876531 111        1  12222 235556555555443  8999999987


Q ss_pred             CCcccHHHHHHhCCCCccEEEEec
Q 023110           82 READEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        82 ~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      .. ......++.++...+++.++.
T Consensus       267 ~~-~~~~~~~~~l~~~G~iv~~G~  289 (369)
T 1uuf_A          267 AP-HNLDDFTTLLKRDGTMTLVGA  289 (369)
T ss_dssp             SC-CCHHHHHTTEEEEEEEEECCC
T ss_pred             CH-HHHHHHHHHhccCCEEEEecc
Confidence            52 234455666663346776553

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=93.83  E-value=0.11  Score=44.26  Aligned_cols=92  Identities=16%  Similarity=0.114  Sum_probs=56.5

Q ss_pred             CCcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh---HHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~~~~~~~~~~~d~v   76 (287)
                      +|+ |.+|...++.+...|. +|+++++++.+.. ..+        +  -+++.+ .|..+.   +.+.++....++|+|
T Consensus       220 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~~~--------~--lGa~~v-i~~~~~~~~~~i~~~t~g~g~D~v  286 (404)
T 3ip1_A          220 LGG-GPIGLAAVAILKHAGASKVILSEPSEVRRN-LAK--------E--LGADHV-IDPTKENFVEAVLDYTNGLGAKLF  286 (404)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHH--------H--HTCSEE-ECTTTSCHHHHHHHHTTTCCCSEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHH--------H--cCCCEE-EcCCCCCHHHHHHHHhCCCCCCEE
Confidence            366 8999999999999998 8999888765521 111        1  123222 233333   334444443479999


Q ss_pred             EecCCCCcccHHHHHHhC----CCCccEEEEec
Q 023110           77 YDINGREADEVEPILDAL----PNLEQFIYCSS  105 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~----~~~~~~i~~Ss  105 (287)
                      |+++|........+++++    +...+++.++.
T Consensus       287 id~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~  319 (404)
T 3ip1_A          287 LEATGVPQLVWPQIEEVIWRARGINATVAIVAR  319 (404)
T ss_dssp             EECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred             EECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence            999986533344455555    65557776653

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=93.82  E-value=0.015  Score=41.79  Aligned_cols=63  Identities=11%  Similarity=0.076  Sum_probs=42.2

Q ss_pred             ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCCC
Q 023110            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~~   83 (287)
                      +|.+|+.+++.|...|++|++.+|+...... +.        +. -+....     ..+++.+.++  ++|+||.+.+..
T Consensus        29 ~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~-~a--------~~-~~~~~~-----~~~~~~~~~~--~~Divi~at~~~   91 (144)
T 3oj0_A           29 NGMLASEIAPYFSYPQYKVTVAGRNIDHVRA-FA--------EK-YEYEYV-----LINDIDSLIK--NNDVIITATSSK   91 (144)
T ss_dssp             CSHHHHHHGGGCCTTTCEEEEEESCHHHHHH-HH--------HH-HTCEEE-----ECSCHHHHHH--TCSEEEECSCCS
T ss_pred             CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHH-HH--------HH-hCCceE-----eecCHHHHhc--CCCEEEEeCCCC
Confidence            5999999999999999999999998765321 10        00 112221     1223455666  899999998754

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=93.82  E-value=0.15  Score=42.80  Aligned_cols=87  Identities=18%  Similarity=0.257  Sum_probs=46.9

Q ss_pred             CCcccchHHHHHH-HHHHcC---CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSR-LLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~-~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      .||||++|+.|++ .|.++.   .++..++.+..  -+.+...        ... ....-+..+.+.    ++  ++|+|
T Consensus        10 vGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~a--G~~~~~~--------~~~-~~~v~~~~~~~~----~~--~vDvv   72 (377)
T 3uw3_A           10 VGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNA--GGKAPSF--------AKN-ETTLKDATSIDD----LK--KCDVI   72 (377)
T ss_dssp             ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCT--TSBCCTT--------CCS-CCBCEETTCHHH----HH--TCSEE
T ss_pred             ECCCCHHHHHHHHHHHhhCCCCceEEEEEechhc--CCCHHHc--------CCC-ceEEEeCCChhH----hc--CCCEE
Confidence            4999999999999 666655   35666554321  1111110        011 111223334333    34  89999


Q ss_pred             EecCCCCcccHHHHHHhC-C-CC-ccEEEEecc
Q 023110           77 YDINGREADEVEPILDAL-P-NL-EQFIYCSSA  106 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~-~-~~-~~~i~~Ss~  106 (287)
                      |.|.+.  ..+...+..+ + +. +++|=.|+.
T Consensus        73 f~a~~~--~~s~~~~~~~~~~G~k~~VID~ss~  103 (377)
T 3uw3_A           73 ITCQGG--DYTNDVFPKLRAAGWNGYWIDAASS  103 (377)
T ss_dssp             EECSCH--HHHHHHHHHHHHTTCCSEEEECSST
T ss_pred             EECCCh--HHHHHHHHHHHHCCCCEEEEeCCcc
Confidence            999863  3344444432 2 55 366666663

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=93.81  E-value=0.11  Score=43.13  Aligned_cols=89  Identities=13%  Similarity=0.104  Sum_probs=56.1

Q ss_pred             CCcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChH---HHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~~~~~d~v   76 (287)
                      +|+ |.+|...++.+...|. +|+++++++.+. +..++          - ... ..|..+.+   .+.++- ..++|+|
T Consensus       171 ~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~-~~~~~----------l-a~~-v~~~~~~~~~~~~~~~~-~~g~D~v  235 (343)
T 2dq4_A          171 TGA-GPIGLMAAMVVRASGAGPILVSDPNPYRL-AFARP----------Y-ADR-LVNPLEEDLLEVVRRVT-GSGVEVL  235 (343)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH-GGGTT----------T-CSE-EECTTTSCHHHHHHHHH-SSCEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHH----------h-HHh-ccCcCccCHHHHHHHhc-CCCCCEE
Confidence            478 9999999999999999 999999886652 22221          1 111 23443322   233222 3479999


Q ss_pred             EecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      |++++. .......++.++...+++.++.
T Consensus       236 id~~g~-~~~~~~~~~~l~~~G~iv~~g~  263 (343)
T 2dq4_A          236 LEFSGN-EAAIHQGLMALIPGGEARILGI  263 (343)
T ss_dssp             EECSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred             EECCCC-HHHHHHHHHHHhcCCEEEEEec
Confidence            999874 2345566777763347776654

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=93.80  E-value=0.095  Score=37.28  Aligned_cols=76  Identities=13%  Similarity=0.156  Sum_probs=47.4

Q ss_pred             Ccc---cchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         2 Gat---G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |+|   |.+|..+++.|++.|++|+.+.++....                .++.       -..++.++.+  .+|+++-
T Consensus        21 GaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i----------------~G~~-------~~~s~~el~~--~vDlvii   75 (138)
T 1y81_A           21 GASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI----------------EGLK-------CYRSVRELPK--DVDVIVF   75 (138)
T ss_dssp             TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE----------------TTEE-------CBSSGGGSCT--TCCEEEE
T ss_pred             eecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE----------------CCee-------ecCCHHHhCC--CCCEEEE
Confidence            554   8999999999999999988776664321                1222       1112333444  6899888


Q ss_pred             cCCCCcccHHHHHHhC-C-CCccEEEEe
Q 023110           79 INGREADEVEPILDAL-P-NLEQFIYCS  104 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~-~-~~~~~i~~S  104 (287)
                      +..  ......+++.+ + +++.++..+
T Consensus        76 ~vp--~~~v~~v~~~~~~~g~~~i~~~~  101 (138)
T 1y81_A           76 VVP--PKVGLQVAKEAVEAGFKKLWFQP  101 (138)
T ss_dssp             CSC--HHHHHHHHHHHHHTTCCEEEECT
T ss_pred             EeC--HHHHHHHHHHHHHcCCCEEEEcC
Confidence            765  35555555443 2 666665544

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=93.79  E-value=0.15  Score=41.00  Aligned_cols=60  Identities=15%  Similarity=0.156  Sum_probs=42.7

Q ss_pred             ccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      +|-+|++++..|.+.|. +|++..|+.++. +.+.           ..+..+     ..+++.+++.  ++|+||++...
T Consensus       125 aGg~g~aia~~L~~~G~~~v~v~~R~~~~a-~~la-----------~~~~~~-----~~~~~~~~~~--~aDiVInaTp~  185 (277)
T 3don_A          125 AGGASKGIANELYKIVRPTLTVANRTMSRF-NNWS-----------LNINKI-----NLSHAESHLD--EFDIIINTTPA  185 (277)
T ss_dssp             CSHHHHHHHHHHHTTCCSCCEEECSCGGGG-TTCC-----------SCCEEE-----CHHHHHHTGG--GCSEEEECCC-
T ss_pred             CcHHHHHHHHHHHHCCCCEEEEEeCCHHHH-HHHH-----------Hhcccc-----cHhhHHHHhc--CCCEEEECccC
Confidence            48899999999999998 899999997763 2232           122221     3345666676  89999998754

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=93.78  E-value=0.052  Score=45.43  Aligned_cols=89  Identities=18%  Similarity=0.137  Sum_probs=56.7

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      | +|.+|...++.+...|.+|+++++++.+.....++          -+.+. ..|..+.+.+.++..  ++|+||++++
T Consensus       188 G-aG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~----------lGa~~-vi~~~~~~~~~~~~~--g~D~vid~~g  253 (357)
T 2cf5_A          188 G-LGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD----------LGADD-YVIGSDQAKMSELAD--SLDYVIDTVP  253 (357)
T ss_dssp             C-CSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT----------SCCSC-EEETTCHHHHHHSTT--TEEEEEECCC
T ss_pred             C-CCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH----------cCCce-eeccccHHHHHHhcC--CCCEEEECCC
Confidence            6 48899999999988999999999987663211111          12221 134455555665554  8999999987


Q ss_pred             CCcccHHHHHHhCCCCccEEEEec
Q 023110           82 READEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        82 ~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      .. ......++.++...+++.++.
T Consensus       254 ~~-~~~~~~~~~l~~~G~iv~~G~  276 (357)
T 2cf5_A          254 VH-HALEPYLSLLKLDGKLILMGV  276 (357)
T ss_dssp             SC-CCSHHHHTTEEEEEEEEECSC
T ss_pred             Ch-HHHHHHHHHhccCCEEEEeCC
Confidence            43 223445666663356776553

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=93.75  E-value=0.028  Score=46.39  Aligned_cols=71  Identities=17%  Similarity=0.217  Sum_probs=42.9

Q ss_pred             CcccchHHHHHHHHHHcCC--eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            2 GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      | +|.+|.+++..|+..|.  +|++++++.........++... .......+.....|   .    +.++  ++|+||.+
T Consensus        12 G-aG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~---~----~a~~--~aDvVvi~   80 (326)
T 3pqe_A           12 G-AGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGT---Y----EDCK--DADIVCIC   80 (326)
T ss_dssp             C-CSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEEC---G----GGGT--TCSEEEEC
T ss_pred             C-CCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCc---H----HHhC--CCCEEEEe
Confidence            6 49999999999999886  8999998765421100000000 00001234444333   2    3466  89999999


Q ss_pred             CCCC
Q 023110           80 NGRE   83 (287)
Q Consensus        80 a~~~   83 (287)
                      +|..
T Consensus        81 ag~p   84 (326)
T 3pqe_A           81 AGAN   84 (326)
T ss_dssp             CSCC
T ss_pred             cccC
Confidence            9874

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=93.70  E-value=0.11  Score=43.99  Aligned_cols=90  Identities=16%  Similarity=0.068  Sum_probs=55.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCC----------------------C
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK----------------------D   60 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~----------------------d   60 (287)
                      |.|-+|..+++.+...|.+|++.+|++..... ..        .  -+.+++..|..                      .
T Consensus       179 GaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~-~~--------~--~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~  247 (384)
T 1l7d_A          179 GVGVAGLQAIATAKRLGAVVMATDVRAATKEQ-VE--------S--LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ  247 (384)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCSTTHHH-HH--------H--TTCEECCC-----------------------CCH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH--------H--cCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence            36999999999999999999999998765211 10        0  12222211110                      1


Q ss_pred             hHHHHhhhhcCCccEEEecC---CCCc--ccHHHHHHhCCCCccEEEEec
Q 023110           61 YDFVKSSLSAKGFDVVYDIN---GREA--DEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        61 ~~~~~~~~~~~~~d~vi~~a---~~~~--~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      .+.+.+.++  ++|+||+++   +...  .-+...++.++....+|.++.
T Consensus       248 ~~~l~~~~~--~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~  295 (384)
T 1l7d_A          248 AEAVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV  295 (384)
T ss_dssp             HHHHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred             HHHHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence            233667777  899999998   4222  123567777775456776663

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=93.67  E-value=0.1  Score=42.09  Aligned_cols=29  Identities=31%  Similarity=0.547  Sum_probs=26.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|+.+++.|.+.|++|++.+|++..
T Consensus         8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~   36 (287)
T 3pef_A            8 GLGIMGSAMAKNLVKAGCSVTIWNRSPEK   36 (287)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred             eecHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            57999999999999999999999998776

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=93.67  E-value=0.037  Score=44.40  Aligned_cols=30  Identities=17%  Similarity=0.022  Sum_probs=26.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      +|+ |.+|++++..|.+.|.+|++..|+.++
T Consensus       125 iGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~  154 (271)
T 1nyt_A          125 IGA-GGASRGVLLPLLSLDCAVTITNRTVSR  154 (271)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             ECC-cHHHHHHHHHHHHcCCEEEEEECCHHH
Confidence            476 679999999999999999999998755

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=93.65  E-value=0.51  Score=39.83  Aligned_cols=62  Identities=15%  Similarity=0.142  Sum_probs=47.3

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |+|.+|+.+++.+.+.|++|++++.++......+.             -..+..+..|.+.+.++++  .+|+|...
T Consensus        21 G~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~a-------------d~~~~~~~~d~~~l~~~~~--~~dvI~~~   82 (389)
T 3q2o_A           21 GGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVA-------------DIEIVASYDDLKAIQHLAE--ISDVVTYE   82 (389)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTC-------------SEEEECCTTCHHHHHHHHH--TCSEEEES
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhC-------------CceEecCcCCHHHHHHHHH--hCCEeeec
Confidence            46789999999999999999999877654222221             1345688899999999998  78887643

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=93.64  E-value=0.14  Score=42.23  Aligned_cols=84  Identities=15%  Similarity=0.109  Sum_probs=53.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|++|++.+|+...... ..          ..++..     .   ++.++++  ++|+|+.+...
T Consensus       162 G~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~-~~----------~~g~~~-----~---~l~e~l~--~aDvVi~~vp~  220 (330)
T 2gcg_A          162 GLGRIGQAIARRLKPFGVQRFLYTGRQPRPEE-AA----------EFQAEF-----V---STPELAA--QSDFIVVACSL  220 (330)
T ss_dssp             CCSHHHHHHHHHHGGGTCCEEEEESSSCCHHH-HH----------TTTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCcchhH-HH----------hcCcee-----C---CHHHHHh--hCCEEEEeCCC
Confidence            46999999999999999999999988654211 10          112322     1   2455666  78998877654


Q ss_pred             Cc--ccH--HHHHHhCCCCccEEEEecce
Q 023110           83 EA--DEV--EPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~--~~~--~~ll~~~~~~~~~i~~Ss~~  107 (287)
                      ..  ...  ..++..++...-+|.+|+..
T Consensus       221 ~~~t~~~i~~~~~~~mk~gailIn~srg~  249 (330)
T 2gcg_A          221 TPATEGLCNKDFFQKMKETAVFINISRGD  249 (330)
T ss_dssp             CTTTTTCBSHHHHHHSCTTCEEEECSCGG
T ss_pred             ChHHHHhhCHHHHhcCCCCcEEEECCCCc
Confidence            31  111  34666776545667666644

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=93.63  E-value=0.075  Score=43.68  Aligned_cols=86  Identities=17%  Similarity=0.155  Sum_probs=54.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|.+|...++.+...|.+|++++++..  .+..        .+  -+++. ..|..+.+.+.+.++  ++|+||++.
T Consensus       159 ~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~--~~~~--------~~--lGa~~-~i~~~~~~~~~~~~~--g~D~v~d~~  223 (321)
T 3tqh_A          159 HAGAGGVGHLAIQLAKQKGTTVITTASKRN--HAFL--------KA--LGAEQ-CINYHEEDFLLAIST--PVDAVIDLV  223 (321)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEECHHH--HHHH--------HH--HTCSE-EEETTTSCHHHHCCS--CEEEEEESS
T ss_pred             EcCCcHHHHHHHHHHHHcCCEEEEEeccch--HHHH--------HH--cCCCE-EEeCCCcchhhhhcc--CCCEEEECC
Confidence            488999999999999999999999875432  1111        11  12222 235555443555565  899999998


Q ss_pred             CCCcccHHHHHHhCCCCccEEEE
Q 023110           81 GREADEVEPILDALPNLEQFIYC  103 (287)
Q Consensus        81 ~~~~~~~~~ll~~~~~~~~~i~~  103 (287)
                      |.  ......++.++...+++.+
T Consensus       224 g~--~~~~~~~~~l~~~G~iv~~  244 (321)
T 3tqh_A          224 GG--DVGIQSIDCLKETGCIVSV  244 (321)
T ss_dssp             CH--HHHHHHGGGEEEEEEEEEC
T ss_pred             Cc--HHHHHHHHhccCCCEEEEe
Confidence            73  3335555665533466644

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=93.63  E-value=0.16  Score=42.47  Aligned_cols=92  Identities=15%  Similarity=0.132  Sum_probs=55.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccc---cccCCCCChhhhhhhcCCeEEEEecCCC------hHHHHhhh--h
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI---AQQLPGESDQEFAEFSSKILHLKGDRKD------YDFVKSSL--S   69 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~D~~d------~~~~~~~~--~   69 (287)
                      +||+|.+|...++.+...|.+|++++++.+..   ...++        +  -+++.+ .|..+      .+.+.++.  .
T Consensus       174 ~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~--------~--lGa~~v-i~~~~~~~~~~~~~i~~~t~~~  242 (364)
T 1gu7_A          174 NGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK--------E--LGATQV-ITEDQNNSREFGPTIKEWIKQS  242 (364)
T ss_dssp             SCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH--------H--HTCSEE-EEHHHHHCGGGHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHH--------h--cCCeEE-EecCccchHHHHHHHHHHhhcc
Confidence            58899999999999988999999998776531   11111        1  122221 12211      12333333  2


Q ss_pred             cCCccEEEecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           70 AKGFDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        70 ~~~~d~vi~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ..++|+||++.|.  ......++.++...+++.++.
T Consensus       243 ~~g~Dvvid~~G~--~~~~~~~~~l~~~G~~v~~g~  276 (364)
T 1gu7_A          243 GGEAKLALNCVGG--KSSTGIARKLNNNGLMLTYGG  276 (364)
T ss_dssp             TCCEEEEEESSCH--HHHHHHHHTSCTTCEEEECCC
T ss_pred             CCCceEEEECCCc--hhHHHHHHHhccCCEEEEecC
Confidence            3479999999874  233356677775557776653

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=93.60  E-value=0.018  Score=50.30  Aligned_cols=30  Identities=27%  Similarity=0.395  Sum_probs=27.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~   32 (287)
                      |+|++|..++..|.+.|++|++++|++...
T Consensus        15 G~G~vG~~lA~~la~~G~~V~~~d~~~~~v   44 (478)
T 2y0c_A           15 GSGSVGLVTGACLADIGHDVFCLDVDQAKI   44 (478)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CcCHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            689999999999999999999999987653

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=93.60  E-value=0.069  Score=46.32  Aligned_cols=83  Identities=11%  Similarity=-0.099  Sum_probs=56.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|++.++++.......           ..++..        ..+.++++  ++|+|+.+.+.
T Consensus       264 G~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-----------~~g~~~--------~~l~ell~--~aDiVi~~~~t  322 (479)
T 1v8b_A          264 GYGDVGKGCASSMKGLGARVYITEIDPICAIQAV-----------MEGFNV--------VTLDEIVD--KGDFFITCTGN  322 (479)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-----------TTTCEE--------CCHHHHTT--TCSEEEECCSS
T ss_pred             eeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-----------HcCCEe--------cCHHHHHh--cCCEEEECCCh
Confidence            4799999999999999999999999875421111           123332        13667787  89999987543


Q ss_pred             CcccHHHHHHhCCCCccEEEEecc
Q 023110           83 EADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                      ...-....++.++...-+|.+++.
T Consensus       323 ~~lI~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          323 VDVIKLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             SSSBCHHHHTTCCTTCEEEECSST
T ss_pred             hhhcCHHHHhhcCCCcEEEEeCCC
Confidence            222234566677755677777763

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=93.56  E-value=0.046  Score=45.41  Aligned_cols=87  Identities=20%  Similarity=0.182  Sum_probs=48.3

Q ss_pred             CCcccchHHHHHHHHHHcCC---eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      .||||++|..|++.|.++.+   ++..+....+. -+.+.          ..+.+...-++.+     ..++  ++|+||
T Consensus         7 vGatG~vG~el~~lL~~h~fp~~el~~~~s~~~a-G~~~~----------~~~~~~~~~~~~~-----~~~~--~~Dvvf   68 (344)
T 3tz6_A            7 VGATGQVGQVMRTLLDERDFPASAVRFFASARSQ-GRKLA----------FRGQEIEVEDAET-----ADPS--GLDIAL   68 (344)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTS-SCEEE----------ETTEEEEEEETTT-----SCCT--TCSEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCceEEEEEECcccC-CCcee----------ecCCceEEEeCCH-----HHhc--cCCEEE
Confidence            49999999999998888743   45555432221 01110          0112222223322     1234  899999


Q ss_pred             ecCCCCcccHHHHHHhCC-CCccEEEEecce
Q 023110           78 DINGREADEVEPILDALP-NLEQFIYCSSAG  107 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~  107 (287)
                      .|.+  .......+..+. ...++|-.|+..
T Consensus        69 ~a~~--~~~s~~~a~~~~~~G~~vID~Sa~~   97 (344)
T 3tz6_A           69 FSAG--SAMSKVQAPRFAAAGVTVIDNSSAW   97 (344)
T ss_dssp             ECSC--HHHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ECCC--hHHHHHHHHHHHhCCCEEEECCCcc
Confidence            9987  333444444432 334788888754

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=93.53  E-value=0.13  Score=42.07  Aligned_cols=84  Identities=17%  Similarity=0.037  Sum_probs=55.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|+..... . .          ..+++.     .   ++.++++  ++|+|+.+...
T Consensus       149 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~-~----------~~g~~~-----~---~l~ell~--~aDvV~l~~p~  206 (307)
T 1wwk_A          149 GFGRIGYQVAKIANALGMNILLYDPYPNEER-A-K----------EVNGKF-----V---DLETLLK--ESDVVTIHVPL  206 (307)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCHHH-H-H----------HTTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCChhh-H-h----------hcCccc-----c---CHHHHHh--hCCEEEEecCC
Confidence            5799999999999999999999999875411 0 0          123332     1   2556677  78998877543


Q ss_pred             Cc--cc--HHHHHHhCCCCccEEEEeccee
Q 023110           83 EA--DE--VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~--~~--~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +.  ..  ....+..++...-+|.+|+..+
T Consensus       207 ~~~t~~li~~~~l~~mk~ga~lin~arg~~  236 (307)
T 1wwk_A          207 VESTYHLINEERLKLMKKTAILINTSRGPV  236 (307)
T ss_dssp             STTTTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred             ChHHhhhcCHHHHhcCCCCeEEEECCCCcc
Confidence            22  11  1346677775567888877543

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=93.53  E-value=0.11  Score=42.53  Aligned_cols=84  Identities=14%  Similarity=0.014  Sum_probs=55.3

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|++|++.+|+.....  ..          ..++..  .      ++.++++  ++|+|+.+...
T Consensus       149 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~--~~----------~~g~~~--~------~l~ell~--~aDvVvl~~P~  206 (313)
T 2ekl_A          149 GFGRIGTKVGIIANAMGMKVLAYDILDIREK--AE----------KINAKA--V------SLEELLK--NSDVISLHVTV  206 (313)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEEECSSCCHHH--HH----------HTTCEE--C------CHHHHHH--HCSEEEECCCC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEECCCcchhH--HH----------hcCcee--c------CHHHHHh--hCCEEEEeccC
Confidence            5799999999999999999999999876521  00          123332  1      3456676  78998877543


Q ss_pred             Ccc--c--HHHHHHhCCCCccEEEEeccee
Q 023110           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~--~--~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +..  .  ....+..++...-+|.+|+..+
T Consensus       207 ~~~t~~li~~~~l~~mk~ga~lIn~arg~~  236 (313)
T 2ekl_A          207 SKDAKPIIDYPQFELMKDNVIIVNTSRAVA  236 (313)
T ss_dssp             CTTSCCSBCHHHHHHSCTTEEEEESSCGGG
T ss_pred             ChHHHHhhCHHHHhcCCCCCEEEECCCCcc
Confidence            221  1  1356677775567777776443

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=93.52  E-value=0.03  Score=46.11  Aligned_cols=28  Identities=7%  Similarity=-0.069  Sum_probs=25.8

Q ss_pred             cccchHHHHHHHHHHcC-CeEEEEEcCCc
Q 023110            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKA   30 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g-~~V~~~~r~~~   30 (287)
                      |.|.+|..+++.|.+.| ++|++.+|++.
T Consensus        31 G~G~mG~~lA~~L~~~G~~~V~~~dr~~~   59 (317)
T 4ezb_A           31 GFGEAAQSIAGGLGGRNAARLAAYDLRFN   59 (317)
T ss_dssp             CCSHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred             CccHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence            57999999999999999 99999999863

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=93.52  E-value=0.12  Score=42.01  Aligned_cols=29  Identities=14%  Similarity=0.133  Sum_probs=27.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|..+++.|.+.|++|++.+|++..
T Consensus        22 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~   50 (296)
T 3qha_A           22 GLGNMGAPMATRMTEWPGGVTVYDIRIEA   50 (296)
T ss_dssp             CCSTTHHHHHHHHTTSTTCEEEECSSTTT
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            57999999999999999999999999876

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=93.52  E-value=0.016  Score=47.95  Aligned_cols=90  Identities=18%  Similarity=0.146  Sum_probs=52.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChH-HHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-FVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~-~~~~~~~~~~~d~vi~~   79 (287)
                      +||+|.+|...++.+...|.+|+++++++.+.. .++        +  -+.+.+ .|..+.+ .....+...++|+||++
T Consensus       157 ~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~-~~~--------~--lGa~~v-~~~~~~~~~~~~~~~~~~~d~vid~  224 (330)
T 1tt7_A          157 TGATGGVGGIAVSMLNKRGYDVVASTGNREAAD-YLK--------Q--LGASEV-ISREDVYDGTLKALSKQQWQGAVDP  224 (330)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH-HHH--------H--HTCSEE-EEHHHHCSSCCCSSCCCCEEEEEES
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH--------H--cCCcEE-EECCCchHHHHHHhhcCCccEEEEC
Confidence            488999999999999999999999999866521 111        1  122221 1221110 00011122379999999


Q ss_pred             CCCCcccHHHHHHhCCCCccEEEEe
Q 023110           80 NGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        80 a~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      +|.  ......++.++...+++.++
T Consensus       225 ~g~--~~~~~~~~~l~~~G~iv~~G  247 (330)
T 1tt7_A          225 VGG--KQLASLLSKIQYGGSVAVSG  247 (330)
T ss_dssp             CCT--HHHHHHHTTEEEEEEEEECC
T ss_pred             CcH--HHHHHHHHhhcCCCEEEEEe
Confidence            985  34445555555334676554

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=93.48  E-value=0.019  Score=47.52  Aligned_cols=96  Identities=13%  Similarity=0.097  Sum_probs=51.0

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCc--cccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKA--PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      .||||++|+.|++.|.++ .+++..+.++.+  ..-+.+.+.. +.+.. .....+...  .+.+   ++++  ++|+||
T Consensus        10 vGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~-p~~~~-~~~~~v~~~--~~~~---~~~~--~~Dvvf   80 (337)
T 3dr3_A           10 VGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLH-PQLKG-IVELPLQPM--SDIS---EFSP--GVDVVF   80 (337)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHC-GGGTT-TCCCBEEEE--SSGG---GTCT--TCSEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhC-ccccC-ccceeEecc--CCHH---HHhc--CCCEEE
Confidence            499999999999999985 568888765441  1011110000 00000 012222211  0222   2224  899999


Q ss_pred             ecCCCCcccHHHHHHhC-CCCccEEEEecce
Q 023110           78 DINGREADEVEPILDAL-PNLEQFIYCSSAG  107 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~-~~~~~~i~~Ss~~  107 (287)
                      .+.+  .......+..+ +...++|-.|+..
T Consensus        81 ~a~p--~~~s~~~~~~~~~~g~~vIDlSa~f  109 (337)
T 3dr3_A           81 LATA--HEVSHDLAPQFLEAGCVVFDLSGAF  109 (337)
T ss_dssp             ECSC--HHHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ECCC--hHHHHHHHHHHHHCCCEEEEcCCcc
Confidence            8876  33344444443 3345788888864

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=93.43  E-value=0.13  Score=41.95  Aligned_cols=29  Identities=14%  Similarity=0.059  Sum_probs=26.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|..+++.|.+.|++|++.+|++..
T Consensus        14 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~   42 (303)
T 3g0o_A           14 GLGSMGMGAARSCLRAGLSTWGADLNPQA   42 (303)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            57999999999999999999999998765

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=93.42  E-value=0.18  Score=38.54  Aligned_cols=27  Identities=22%  Similarity=0.373  Sum_probs=24.3

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGK   29 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~   29 (287)
                      |.|.+|++++..|.+.|++|++.+|++
T Consensus        26 G~G~mG~~la~~l~~~g~~V~~~~~~~   52 (209)
T 2raf_A           26 GKGNMGQAIGHNFEIAGHEVTYYGSKD   52 (209)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            489999999999999999999988763

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=93.39  E-value=0.17  Score=42.34  Aligned_cols=87  Identities=20%  Similarity=0.252  Sum_probs=46.6

Q ss_pred             CCcccchHHHHHH-HHHHcC---CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSR-LLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~-~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      .||||++|+.|++ .|.++.   .++..++.+...  +.+.+.         .+.+...-+..+.+.    ++  ++|+|
T Consensus         6 vGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG--~~~~~~---------~~~~~~~~~~~~~~~----~~--~~Dvv   68 (370)
T 3pzr_A            6 VGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIG--VPAPNF---------GKDAGMLHDAFDIES----LK--QLDAV   68 (370)
T ss_dssp             ESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT--SBCCCS---------SSCCCBCEETTCHHH----HT--TCSEE
T ss_pred             ECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccC--cCHHHh---------CCCceEEEecCChhH----hc--cCCEE
Confidence            4999999999999 666655   366665433221  111110         011111123333332    35  89999


Q ss_pred             EecCCCCcccHHHHHHhC-C-CC-ccEEEEecc
Q 023110           77 YDINGREADEVEPILDAL-P-NL-EQFIYCSSA  106 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~-~-~~-~~~i~~Ss~  106 (287)
                      |.|.+.  ..+...+..+ + +. +++|=.|+.
T Consensus        69 f~a~~~--~~s~~~~~~~~~~G~k~~VID~ss~   99 (370)
T 3pzr_A           69 ITCQGG--SYTEKVYPALRQAGWKGYWIDAAST   99 (370)
T ss_dssp             EECSCH--HHHHHHHHHHHHTTCCCEEEECSST
T ss_pred             EECCCh--HHHHHHHHHHHHCCCCEEEEeCCch
Confidence            999863  3344444432 2 55 366666653

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=93.38  E-value=0.052  Score=46.52  Aligned_cols=29  Identities=24%  Similarity=0.446  Sum_probs=25.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~   32 (287)
                      |+|++|..++..|.+ |++|+++++++...
T Consensus        43 GlG~mG~~lA~~La~-G~~V~~~D~~~~~v   71 (432)
T 3pid_A           43 GTGYVGLSNGVLIAQ-NHEVVALDIVQAKV   71 (432)
T ss_dssp             CCSHHHHHHHHHHHT-TSEEEEECSCHHHH
T ss_pred             CcCHHHHHHHHHHHc-CCeEEEEecCHHHh
Confidence            579999999999887 99999999998763

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=93.35  E-value=0.18  Score=41.73  Aligned_cols=82  Identities=13%  Similarity=0.024  Sum_probs=55.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|+....   ..           ..+.+     .   ++.++++  ++|+|+.+...
T Consensus       152 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~---~~-----------~~~~~-----~---~l~ell~--~aDvV~~~~P~  207 (333)
T 1dxy_A          152 GTGHIGQVAIKLFKGFGAKVIAYDPYPMKG---DH-----------PDFDY-----V---SLEDLFK--QSDVIDLHVPG  207 (333)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSS---CC-----------TTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCcchh---hH-----------hcccc-----C---CHHHHHh--cCCEEEEcCCC
Confidence            569999999999999999999999987542   11           11211     1   3556777  78998877654


Q ss_pred             Ccc--c--HHHHHHhCCCCccEEEEeccee
Q 023110           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~--~--~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +..  .  ....+..++...-+|.+|+..+
T Consensus       208 ~~~t~~li~~~~l~~mk~ga~lIn~srg~~  237 (333)
T 1dxy_A          208 IEQNTHIINEAAFNLMKPGAIVINTARPNL  237 (333)
T ss_dssp             CGGGTTSBCHHHHHHSCTTEEEEECSCTTS
T ss_pred             chhHHHHhCHHHHhhCCCCcEEEECCCCcc
Confidence            321  1  1346677776667888877543

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=93.33  E-value=0.086  Score=46.01  Aligned_cols=83  Identities=12%  Similarity=0.065  Sum_probs=56.2

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|++.++++.......           ..+++.  .   +   +.++++  ++|+||.+.+.
T Consensus       281 G~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~-----------~~Ga~~--~---~---l~e~l~--~aDvVi~atgt  339 (494)
T 3ce6_A          281 GYGDVGKGCAEAMKGQGARVSVTEIDPINALQAM-----------MEGFDV--V---T---VEEAIG--DADIVVTATGN  339 (494)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTCEE--C---C---HHHHGG--GCSEEEECSSS
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcCCEE--e---c---HHHHHh--CCCEEEECCCC
Confidence            3599999999999999999999998876521111           124432  1   2   234566  89999998765


Q ss_pred             CcccHHHHHHhCCCCccEEEEecc
Q 023110           83 EADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                      ...-....++.++....++.++..
T Consensus       340 ~~~i~~~~l~~mk~ggilvnvG~~  363 (494)
T 3ce6_A          340 KDIIMLEHIKAMKDHAILGNIGHF  363 (494)
T ss_dssp             SCSBCHHHHHHSCTTCEEEECSSS
T ss_pred             HHHHHHHHHHhcCCCcEEEEeCCC
Confidence            432334677778865688877753

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=93.29  E-value=0.1  Score=45.50  Aligned_cols=84  Identities=11%  Similarity=-0.075  Sum_probs=57.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|++.+|++.......           ..+++.        ..+.++++  .+|+|+.+.+.
T Consensus       284 G~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-----------~~G~~~--------~~l~ell~--~aDiVi~~~~t  342 (494)
T 3d64_A          284 GYGDVGKGCAQSLRGLGATVWVTEIDPICALQAA-----------MEGYRV--------VTMEYAAD--KADIFVTATGN  342 (494)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-----------TTTCEE--------CCHHHHTT--TCSEEEECSSS
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-----------HcCCEe--------CCHHHHHh--cCCEEEECCCc
Confidence            4689999999999999999999999875421111           123332        13667787  89999987643


Q ss_pred             CcccHHHHHHhCCCCccEEEEecce
Q 023110           83 EADEVEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~Ss~~  107 (287)
                      ...-....++.++...-+|.+++..
T Consensus       343 ~~lI~~~~l~~MK~gAilINvgrg~  367 (494)
T 3d64_A          343 YHVINHDHMKAMRHNAIVCNIGHFD  367 (494)
T ss_dssp             SCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred             ccccCHHHHhhCCCCcEEEEcCCCc
Confidence            2223356778888666788887744

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=93.27  E-value=0.097  Score=44.84  Aligned_cols=61  Identities=16%  Similarity=0.126  Sum_probs=47.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |+|.+|+.+++.+.+.|++|++++.++......+.             -+.+..|..|.+.+.++.+  ++|+|+.
T Consensus        42 G~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~a-------------d~~~~~~~~d~~~l~~~a~--~~D~V~~  102 (419)
T 4e4t_A           42 GGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVA-------------DRHLRAAYDDEAALAELAG--LCEAVST  102 (419)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHS-------------SEEECCCTTCHHHHHHHHH--HCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhC-------------CEEEECCcCCHHHHHHHHh--cCCEEEE
Confidence            46899999999999999999999876554322221             1356688999999999997  8999884

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=93.25  E-value=0.11  Score=44.11  Aligned_cols=90  Identities=13%  Similarity=0.067  Sum_probs=57.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCC-------------Ch-------H
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-------------DY-------D   62 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~-------------d~-------~   62 (287)
                      |.|-+|..+++.+...|.+|+++++++..... +.          .-+.+++..|..             +.       +
T Consensus       179 GaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~-~~----------~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  247 (401)
T 1x13_A          179 GAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQ-VQ----------SMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEME  247 (401)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCGGGHHH-HH----------HTTCEECCC--------CCHHHHHHSHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HH----------HcCCEEEEecccccccccccchhhccHHHHHHHHH
Confidence            35999999999999999999999998765211 11          113333322221             11       1


Q ss_pred             HHHhhhhcCCccEEEecCCCC-----cccHHHHHHhCCCCccEEEEec
Q 023110           63 FVKSSLSAKGFDVVYDINGRE-----ADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        63 ~~~~~~~~~~~d~vi~~a~~~-----~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      .+.+.+.  ++|+||.++...     ..-+...++.++....+|.++.
T Consensus       248 ~l~e~~~--~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~  293 (401)
T 1x13_A          248 LFAAQAK--EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAA  293 (401)
T ss_dssp             HHHHHHH--HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred             HHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcC
Confidence            3667777  799999996432     1124567888875567777764

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=93.25  E-value=0.096  Score=44.51  Aligned_cols=89  Identities=16%  Similarity=0.089  Sum_probs=56.6

Q ss_pred             CcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC----hHHHHhhhhcCCccEE
Q 023110            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLSAKGFDVV   76 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d----~~~~~~~~~~~~~d~v   76 (287)
                      |+ |.+|...++.+...|. +|+++++++.+.. ..+          .-+++.  .|..+    .+.+.++....++|+|
T Consensus       193 Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~----------~lGa~~--i~~~~~~~~~~~~~~~~~g~g~Dvv  258 (398)
T 2dph_A          193 GA-GPVGRCAAAGARLLGAACVIVGDQNPERLK-LLS----------DAGFET--IDLRNSAPLRDQIDQILGKPEVDCG  258 (398)
T ss_dssp             CC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHH-HHH----------TTTCEE--EETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred             CC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHH-HHH----------HcCCcE--EcCCCcchHHHHHHHHhCCCCCCEE
Confidence            65 9999999998888898 8999998876521 111          123443  34433    2334444433379999


Q ss_pred             EecCCCCc-------------ccHHHHHHhCCCCccEEEEe
Q 023110           77 YDINGREA-------------DEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        77 i~~a~~~~-------------~~~~~ll~~~~~~~~~i~~S  104 (287)
                      |++++...             ......++.++...+++.++
T Consensus       259 id~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G  299 (398)
T 2dph_A          259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG  299 (398)
T ss_dssp             EECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred             EECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence            99998642             13556677776334666554

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=93.20  E-value=0.023  Score=47.70  Aligned_cols=90  Identities=12%  Similarity=0.055  Sum_probs=53.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh-HHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~-~~~~~~~~~~~~d~vi~~   79 (287)
                      +|+ |.+|...++.+...|.+|+++++++.+.. .++        +  -+++.+ .|..+. +....+..  ++|+||++
T Consensus       186 ~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~-~~~--------~--lGa~~v-~~~~~~~~~~~~~~~--~~D~vid~  250 (360)
T 1piw_A          186 VGL-GGIGSMGTLISKAMGAETYVISRSSRKRE-DAM--------K--MGADHY-IATLEEGDWGEKYFD--TFDLIVVC  250 (360)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHH--------H--HTCSEE-EEGGGTSCHHHHSCS--CEEEEEEC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHH--------H--cCCCEE-EcCcCchHHHHHhhc--CCCEEEEC
Confidence            477 99999999999889999999999876631 111        1  122222 244333 33333333  89999999


Q ss_pred             CCCC-cccHHHHHHhCCCCccEEEEec
Q 023110           80 NGRE-ADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        80 a~~~-~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ++.. .......++.++...+++.++.
T Consensus       251 ~g~~~~~~~~~~~~~l~~~G~iv~~g~  277 (360)
T 1piw_A          251 ASSLTDIDFNIMPKAMKVGGRIVSISI  277 (360)
T ss_dssp             CSCSTTCCTTTGGGGEEEEEEEEECCC
T ss_pred             CCCCcHHHHHHHHHHhcCCCEEEEecC
Confidence            8751 1223334555553346665543

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=93.20  E-value=0.17  Score=36.33  Aligned_cols=74  Identities=8%  Similarity=0.005  Sum_probs=45.9

Q ss_pred             Ccc---cchHHHHHHHHHHcCCeEEEEEcCC--ccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGK--APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         2 Gat---G~iG~~l~~~l~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      |++   |.+|..+++.|++.|++|+.+..+.  ...                .++. +..++.      ++.+  .+|++
T Consensus        20 Gas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i----------------~G~~-~~~sl~------el~~--~~Dlv   74 (145)
T 2duw_A           20 GASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL----------------LGQQ-GYATLA------DVPE--KVDMV   74 (145)
T ss_dssp             SCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE----------------TTEE-CCSSTT------TCSS--CCSEE
T ss_pred             CcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc----------------CCee-ccCCHH------HcCC--CCCEE
Confidence            665   8899999999999999988776654  221                1222 112222      2333  78998


Q ss_pred             EecCCCCcccHHHHHHhCC--CCccEEE
Q 023110           77 YDINGREADEVEPILDALP--NLEQFIY  102 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~--~~~~~i~  102 (287)
                      +-+..  ......+++.+.  +++.++.
T Consensus        75 ii~vp--~~~v~~v~~~~~~~g~~~i~i  100 (145)
T 2duw_A           75 DVFRN--SEAAWGVAQEAIAIGAKTLWL  100 (145)
T ss_dssp             ECCSC--STHHHHHHHHHHHHTCCEEEC
T ss_pred             EEEeC--HHHHHHHHHHHHHcCCCEEEE
Confidence            88765  345555555433  6666554

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=93.16  E-value=0.17  Score=40.02  Aligned_cols=61  Identities=10%  Similarity=0.098  Sum_probs=42.9

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |+|.+|++++..|.+.|. +|++..|+..+. +.+.           ..+..+     ..+++.+.++  ++|+||++..
T Consensus       115 GaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka-~~la-----------~~~~~~-----~~~~~~~~~~--~aDiVInatp  175 (253)
T 3u62_A          115 GAGGAARAVIYALLQMGVKDIWVVNRTIERA-KALD-----------FPVKIF-----SLDQLDEVVK--KAKSLFNTTS  175 (253)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCEEEEESCHHHH-HTCC-----------SSCEEE-----EGGGHHHHHH--TCSEEEECSS
T ss_pred             CcHHHHHHHHHHHHHcCCCEEEEEeCCHHHH-HHHH-----------HHcccC-----CHHHHHhhhc--CCCEEEECCC
Confidence            458999999999999998 899999987663 2332           122211     1234556677  8999999864


Q ss_pred             C
Q 023110           82 R   82 (287)
Q Consensus        82 ~   82 (287)
                      .
T Consensus       176 ~  176 (253)
T 3u62_A          176 V  176 (253)
T ss_dssp             T
T ss_pred             C
Confidence            3

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=93.14  E-value=0.035  Score=48.37  Aligned_cols=30  Identities=17%  Similarity=0.289  Sum_probs=26.8

Q ss_pred             cccchHHHHHHHHHHc--CCeEEEEEcCCccc
Q 023110            3 GTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~l~~~--g~~V~~~~r~~~~~   32 (287)
                      |+|++|..++..|.+.  |++|++++|++...
T Consensus        12 G~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~   43 (467)
T 2q3e_A           12 GAGYVGGPTCSVIAHMCPEIRVTVVDVNESRI   43 (467)
T ss_dssp             CCSTTHHHHHHHHHHHCTTSEEEEECSCHHHH
T ss_pred             CCCHHHHHHHHHHHhcCCCCEEEEEECCHHHH
Confidence            5799999999999999  89999999987653

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=93.12  E-value=0.14  Score=42.37  Aligned_cols=84  Identities=11%  Similarity=0.048  Sum_probs=55.1

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|+.....  ..          ..+++.     .   ++.++++  ++|+|+.+...
T Consensus       172 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~----------~~g~~~-----~---~l~ell~--~aDvV~l~~P~  229 (335)
T 2g76_A          172 GLGRIGREVATRMQSFGMKTIGYDPIISPEV--SA----------SFGVQQ-----L---PLEEIWP--LCDFITVHTPL  229 (335)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSSCHHH--HH----------HTTCEE-----C---CHHHHGG--GCSEEEECCCC
T ss_pred             eECHHHHHHHHHHHHCCCEEEEECCCcchhh--hh----------hcCcee-----C---CHHHHHh--cCCEEEEecCC
Confidence            5799999999999999999999998765411  00          123332     1   3567777  89999877654


Q ss_pred             Cc--cc--HHHHHHhCCCCccEEEEeccee
Q 023110           83 EA--DE--VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~--~~--~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +.  ..  ....++.++...-+|.+|+..+
T Consensus       230 t~~t~~li~~~~l~~mk~gailIN~arg~v  259 (335)
T 2g76_A          230 LPSTTGLLNDNTFAQCKKGVRVVNCARGGI  259 (335)
T ss_dssp             CTTTTTSBCHHHHTTSCTTEEEEECSCTTS
T ss_pred             CHHHHHhhCHHHHhhCCCCcEEEECCCccc
Confidence            32  11  1345666665567888877443

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=93.12  E-value=0.061  Score=44.74  Aligned_cols=90  Identities=10%  Similarity=0.063  Sum_probs=54.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC--hHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d--~~~~~~~~~~~~~d~vi~   78 (287)
                      +||+|.+|...++.+...|.+|+++++++.+.. .++        +  -+.+.+ .|..+  .+.+.+. ...++|+||+
T Consensus       157 ~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~--------~--lGa~~v-i~~~~~~~~~~~~~-~~~g~Dvv~d  223 (346)
T 3fbg_A          157 INGAGGVGSIATQIAKAYGLRVITTASRNETIE-WTK--------K--MGADIV-LNHKESLLNQFKTQ-GIELVDYVFC  223 (346)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHH-HHH--------H--HTCSEE-ECTTSCHHHHHHHH-TCCCEEEEEE
T ss_pred             EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH--------h--cCCcEE-EECCccHHHHHHHh-CCCCccEEEE
Confidence            389999999999999999999999998765521 111        1  122222 23322  2233333 3347999999


Q ss_pred             cCCCCcccHHHHHHhCCCCccEEEEe
Q 023110           79 INGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      +++. .......++.++...+++.++
T Consensus       224 ~~g~-~~~~~~~~~~l~~~G~iv~~~  248 (346)
T 3fbg_A          224 TFNT-DMYYDDMIQLVKPRGHIATIV  248 (346)
T ss_dssp             SSCH-HHHHHHHHHHEEEEEEEEESS
T ss_pred             CCCc-hHHHHHHHHHhccCCEEEEEC
Confidence            9873 122355666666334666443

>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3

Probab=93.09  E-value=0.52  Score=36.36  Aligned_cols=138  Identities=13%  Similarity=0.118  Sum_probs=81.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEE-cCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhh---cCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS---AKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~~~~d~v   76 (287)
                      .|++|.+|+.+++.....|+++.+.. +...   ..+            .+.+ +..|++.|+.....++   +.+...|
T Consensus        18 ~Ga~GrMG~~i~~~~~~~~~elv~~id~~~~---~~l------------~~~D-VvIDFT~P~a~~~~~~~~~~~g~~~V   81 (228)
T 1vm6_A           18 VGYSGRMGQEIQKVFSEKGHELVLKVDVNGV---EEL------------DSPD-VVIDFSSPEALPKTVDLCKKYRAGLV   81 (228)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEEETTEE---EEC------------SCCS-EEEECSCGGGHHHHHHHHHHHTCEEE
T ss_pred             EEecCHHHHHHHHHHhCCCCEEEEEEcCCCc---ccc------------cCCC-EEEECCCHHHHHHHHHHHHHcCCCEE
Confidence            48999999999987766788877653 3321   111            1222 6678888776554443   3478888


Q ss_pred             EecCCCCcccHHHHHHhCCCCccEEEEeccee--------------eccCCCCCCCCCCCC-CCCcc-hhhhHHHHHHhh
Q 023110           77 YDINGREADEVEPILDALPNLEQFIYCSSAGV--------------YLKSDLLPHCETDTV-DPKSR-HKGKLNTESVLE  140 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~v--------------~~~~~~~~~~e~~~~-~~~~~-~~~k~~~E~~~~  140 (287)
                      +-..|........+-++++. ..+++.+..++              +-+.....+.|.+.. .-..| +.++..+|.+  
T Consensus        82 iGTTG~~~~~~~~l~~~a~~-~~vv~apNfSlGvnll~~l~~~aA~~l~~ydiEIiE~HH~~K~DAPSGTAl~lae~i--  158 (228)
T 1vm6_A           82 LGTTALKEEHLQMLRELSKE-VPVVQAYNFSIGINVLKRFLSELVKVLEDWDVEIVETHHRFKKDAPSGTAILLESAL--  158 (228)
T ss_dssp             ECCCSCCHHHHHHHHHHTTT-SEEEECSCCCHHHHHHHHHHHHHHHHTTTSEEEEEEEECTTCCCSSCHHHHHHHHHT--
T ss_pred             EeCCCCCHHHHHHHHHHHhh-CCEEEeccccHHHHHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCHHHHHHHHhc--
Confidence            88888766555445454444 45555544332              001111122233222 11223 3666666665  


Q ss_pred             hCCCcEEEEecCeeecC
Q 023110          141 SKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       141 ~~~~~~~ilR~~~v~g~  157 (287)
                      ..++.+..+|.|.+.|.
T Consensus       159 ~~~I~i~svR~g~ivg~  175 (228)
T 1vm6_A          159 GKSVPIHSLRVGGVPGD  175 (228)
T ss_dssp             TSCCCEEEEECTTCCCE
T ss_pred             ccCCCEEEEECCCCcEE
Confidence            35799999999998885

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=93.09  E-value=0.066  Score=44.68  Aligned_cols=85  Identities=14%  Similarity=0.050  Sum_probs=55.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|+..... ..           ..+++.+       +++.++++  ++|+|+.+...
T Consensus       167 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~-----------~~g~~~~-------~~l~ell~--~aDiV~l~~Pl  225 (352)
T 3gg9_A          167 GYGKIGQLVAGYGRAFGMNVLVWGRENSKER-AR-----------ADGFAVA-------ESKDALFE--QSDVLSVHLRL  225 (352)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSHHHHHH-HH-----------HTTCEEC-------SSHHHHHH--HCSEEEECCCC
T ss_pred             eECHHHHHHHHHHHhCCCEEEEECCCCCHHH-HH-----------hcCceEe-------CCHHHHHh--hCCEEEEeccC
Confidence            5799999999999999999999998753210 00           1233321       24667777  78988876543


Q ss_pred             Cc--c--cHHHHHHhCCCCccEEEEeccee
Q 023110           83 EA--D--EVEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~--~--~~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +.  .  -....+..++...-||.+|...+
T Consensus       226 t~~t~~li~~~~l~~mk~gailIN~aRg~~  255 (352)
T 3gg9_A          226 NDETRSIITVADLTRMKPTALFVNTSRAEL  255 (352)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred             cHHHHHhhCHHHHhhCCCCcEEEECCCchh
Confidence            21  1  12345666766678888887554

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=93.05  E-value=0.038  Score=46.22  Aligned_cols=96  Identities=11%  Similarity=0.148  Sum_probs=48.3

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCcc---ccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP---IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      .||||++|+.|++.|.++. .++..+....+.   .....++.....+........+...   +.+.    +.  ++|+|
T Consensus        13 vGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~~~----~~--~vDvv   83 (359)
T 4dpl_A           13 LGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT---DPKL----MD--DVDII   83 (359)
T ss_dssp             TTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC---CGGG----CT--TCCEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC---CHHH----hc--CCCEE
Confidence            5999999999999877764 467666543221   1111110000000000001111111   2222    34  89999


Q ss_pred             EecCCCCcccHHHHHHhC-CCCccEEEEecce
Q 023110           77 YDINGREADEVEPILDAL-PNLEQFIYCSSAG  107 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~-~~~~~~i~~Ss~~  107 (287)
                      |.|.+...  ...++..+ +...++|-.|+..
T Consensus        84 f~a~p~~~--s~~~a~~~~~~G~~vIDlSa~~  113 (359)
T 4dpl_A           84 FSPLPQGA--AGPVEEQFAKEGFPVISNSPDH  113 (359)
T ss_dssp             EECCCTTT--HHHHHHHHHHTTCEEEECSSTT
T ss_pred             EECCChHH--HHHHHHHHHHCCCEEEEcCCCc
Confidence            99977433  33344332 2345788888764

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=93.05  E-value=0.038  Score=46.22  Aligned_cols=96  Identities=11%  Similarity=0.148  Sum_probs=48.3

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCcc---ccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP---IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      .||||++|+.|++.|.++. .++..+....+.   .....++.....+........+...   +.+.    +.  ++|+|
T Consensus        13 vGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~~~----~~--~vDvv   83 (359)
T 4dpk_A           13 LGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT---DPKL----MD--DVDII   83 (359)
T ss_dssp             TTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC---CGGG----CT--TCCEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC---CHHH----hc--CCCEE
Confidence            5999999999999877764 467666543221   1111110000000000001111111   2222    34  89999


Q ss_pred             EecCCCCcccHHHHHHhC-CCCccEEEEecce
Q 023110           77 YDINGREADEVEPILDAL-PNLEQFIYCSSAG  107 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~-~~~~~~i~~Ss~~  107 (287)
                      |.|.+...  ...++..+ +...++|-.|+..
T Consensus        84 f~a~p~~~--s~~~a~~~~~~G~~vIDlSa~~  113 (359)
T 4dpk_A           84 FSPLPQGA--AGPVEEQFAKEGFPVISNSPDH  113 (359)
T ss_dssp             EECCCTTT--HHHHHHHHHHTTCEEEECSSTT
T ss_pred             EECCChHH--HHHHHHHHHHCCCEEEEcCCCc
Confidence            99977433  33344332 2345788888764

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=93.02  E-value=0.078  Score=44.49  Aligned_cols=87  Identities=20%  Similarity=0.300  Sum_probs=46.6

Q ss_pred             CCcccchHHHHHHHHHH-cCC---eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVK-EGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~-~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      .||+|++|+.|++.++. +++   +++.+..+...  ..+..         ..+.+....+..+++.    ++  ++|+|
T Consensus         7 vGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G--~~v~~---------~~g~~i~~~~~~~~~~----~~--~~DvV   69 (367)
T 1t4b_A            7 IGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLG--QAAPS---------FGGTTGTLQDAFDLEA----LK--ALDII   69 (367)
T ss_dssp             ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT--SBCCG---------GGTCCCBCEETTCHHH----HH--TCSEE
T ss_pred             ECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCC--CCccc---------cCCCceEEEecCChHH----hc--CCCEE
Confidence            38999999999995444 443   45555554211  11110         0112233334445444    34  89999


Q ss_pred             EecCCCCcccHHHHHHhCC--CCc-cEEEEecc
Q 023110           77 YDINGREADEVEPILDALP--NLE-QFIYCSSA  106 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~--~~~-~~i~~Ss~  106 (287)
                      |.+.+  ...+...+..+.  +.+ .+|=.||.
T Consensus        70 f~a~g--~~~s~~~a~~~~~~G~k~vVID~ss~  100 (367)
T 1t4b_A           70 VTCQG--GDYTNEIYPKLRESGWQGYWIDAASS  100 (367)
T ss_dssp             EECSC--HHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred             EECCC--chhHHHHHHHHHHCCCCEEEEcCChh
Confidence            99987  333444444433  553 45544543

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=93.01  E-value=0.55  Score=36.82  Aligned_cols=97  Identities=13%  Similarity=0.145  Sum_probs=57.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEE-EEcCCcccc--ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhh-hcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKAPIA--QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL-SAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~-~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~-~~~~~d~v   76 (287)
                      +|+ |.+|+.+++.+.+.++++++ ++|+.....  ....+     +.+.. +.+. ..|++.++.....+ .+.+..+|
T Consensus         9 iGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~~~gv~v~~d-----l~~l~-~~DV-vIDft~p~a~~~~~~l~~g~~vV   80 (243)
T 3qy9_A            9 IGY-GAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQH-----IADVK-GADV-AIDFSNPNLLFPLLDEDFHLPLV   80 (243)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEECSSCC--CCSCBCSC-----TTTCT-TCSE-EEECSCHHHHHHHHTSCCCCCEE
T ss_pred             ECc-CHHHHHHHHHHHhCCCEEEEEEecCccccCCCceeCC-----HHHHh-CCCE-EEEeCChHHHHHHHHHhcCCceE
Confidence            377 99999999999998668777 455543210  00000     00111 3333 35778877766555 33478889


Q ss_pred             EecCCCCcccHHHHHHhCCCCccEEEEecc
Q 023110           77 YDINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                      +...|........+.++++. ..+++.+..
T Consensus        81 igTTG~s~e~~~~l~~aa~~-~~v~~a~N~  109 (243)
T 3qy9_A           81 VATTGEKEKLLNKLDELSQN-MPVFFSANM  109 (243)
T ss_dssp             ECCCSSHHHHHHHHHHHTTT-SEEEECSSC
T ss_pred             eCCCCCCHHHHHHHHHHHhc-CCEEEECCc
Confidence            88887655555566666654 455555443

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=92.98  E-value=0.052  Score=44.32  Aligned_cols=29  Identities=31%  Similarity=0.393  Sum_probs=26.1

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|..++..|.+.|++|++++|++..
T Consensus        10 G~G~~G~~~a~~l~~~g~~V~~~~r~~~~   38 (316)
T 2ew2_A           10 GAGAMGSRLGIMLHQGGNDVTLIDQWPAH   38 (316)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECCHHH
Confidence            46999999999999999999999998654

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=92.88  E-value=0.1  Score=43.42  Aligned_cols=89  Identities=18%  Similarity=0.209  Sum_probs=49.9

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeE--EEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL--HLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      .||||++|+.|++.|.++. .++..+....+. -+.+.+        ..+.+.  ...-+ .+.+.   +++  ++|+||
T Consensus        19 vGAtG~vG~ellrlL~~hP~~el~~l~S~~~a-G~~~~~--------~~p~~~~~l~~~~-~~~~~---~~~--~~Dvvf   83 (351)
T 1vkn_A           19 IGATGYTGLELVRLLKNHPEAKITYLSSRTYA-GKKLEE--------IFPSTLENSILSE-FDPEK---VSK--NCDVLF   83 (351)
T ss_dssp             ESTTSHHHHHHHHHHHHCTTEEEEEEECSTTT-TSBHHH--------HCGGGCCCCBCBC-CCHHH---HHH--HCSEEE
T ss_pred             ECCCCHHHHHHHHHHHcCCCcEEEEEeCcccc-cCChHH--------hChhhccCceEEe-CCHHH---hhc--CCCEEE
Confidence            4999999999999999985 466666532211 111100        001111  11111 13333   335  799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEecce
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~  107 (287)
                      .+++  ......++..+ ...++|=.|+..
T Consensus        84 ~alp--~~~s~~~~~~~-~g~~VIDlSsdf  110 (351)
T 1vkn_A           84 TALP--AGASYDLVREL-KGVKIIDLGADF  110 (351)
T ss_dssp             ECCS--TTHHHHHHTTC-CSCEEEESSSTT
T ss_pred             ECCC--cHHHHHHHHHh-CCCEEEECChhh
Confidence            9876  34445555555 445788888753

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=92.80  E-value=0.071  Score=43.01  Aligned_cols=71  Identities=11%  Similarity=0.069  Sum_probs=44.5

Q ss_pred             CCcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      +|+ |-+|++++..|.+.|. +|+++.|+.++......     .+......+.+...++   +++.+.+.  ++|+||++
T Consensus       133 lGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~-----~~~~~~~~~~i~~~~~---~~l~~~l~--~~DiVIna  201 (283)
T 3jyo_A          133 VGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALAD-----VINNAVGREAVVGVDA---RGIEDVIA--AADGVVNA  201 (283)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHH-----HHHHHHTSCCEEEECS---TTHHHHHH--HSSEEEEC
T ss_pred             ECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHH-----HHHhhcCCceEEEcCH---HHHHHHHh--cCCEEEEC
Confidence            355 8899999999999998 79999998765321110     0111011233333333   33556666  78999998


Q ss_pred             CCC
Q 023110           80 NGR   82 (287)
Q Consensus        80 a~~   82 (287)
                      ...
T Consensus       202 Tp~  204 (283)
T 3jyo_A          202 TPM  204 (283)
T ss_dssp             SST
T ss_pred             CCC
Confidence            753

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=92.77  E-value=0.051  Score=45.29  Aligned_cols=82  Identities=15%  Similarity=0.172  Sum_probs=53.5

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |+ |.+|...++.+...|.+|+++++++.+.. .++        +  -+.+.+.   .+.+.+    ++ ++|+||++.+
T Consensus       184 Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~--------~--lGa~~v~---~~~~~~----~~-~~D~vid~~g  243 (348)
T 3two_A          184 GF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQ-DAL--------S--MGVKHFY---TDPKQC----KE-ELDFIISTIP  243 (348)
T ss_dssp             SC-SHHHHHHHHHHHHTTCEEEEECSSSTTHH-HHH--------H--TTCSEEE---SSGGGC----CS-CEEEEEECCC
T ss_pred             CC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHH--------h--cCCCeec---CCHHHH----hc-CCCEEEECCC
Confidence            65 99999999999999999999998877632 111        1  2333332   343322    22 8999999988


Q ss_pred             CCcccHHHHHHhCCCCccEEEEe
Q 023110           82 READEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        82 ~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      .. ......++.++...+++.++
T Consensus       244 ~~-~~~~~~~~~l~~~G~iv~~G  265 (348)
T 3two_A          244 TH-YDLKDYLKLLTYNGDLALVG  265 (348)
T ss_dssp             SC-CCHHHHHTTEEEEEEEEECC
T ss_pred             cH-HHHHHHHHHHhcCCEEEEEC
Confidence            53 24555666666445777654

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=92.74  E-value=0.12  Score=43.29  Aligned_cols=86  Identities=12%  Similarity=0.072  Sum_probs=54.2

Q ss_pred             cccchHHHHHHHHHHcCCe-EEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |.|.||+.+++.|...|++ |++.+|+...... ..          ..++..  .     +++.++++  ++|+|+.+..
T Consensus       171 G~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~-~~----------~~g~~~--~-----~~l~ell~--~aDvV~l~~P  230 (364)
T 2j6i_A          171 GAGRIGYRVLERLVPFNPKELLYYDYQALPKDA-EE----------KVGARR--V-----ENIEELVA--QADIVTVNAP  230 (364)
T ss_dssp             CCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHH-HH----------HTTEEE--C-----SSHHHHHH--TCSEEEECCC
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECCCccchhH-HH----------hcCcEe--c-----CCHHHHHh--cCCEEEECCC
Confidence            5799999999999999997 9999987644210 00          123332  1     13566777  8999887765


Q ss_pred             CCcc--c--HHHHHHhCCCCccEEEEeccee
Q 023110           82 READ--E--VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        82 ~~~~--~--~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      .+..  .  ....+..++...-+|.+|...+
T Consensus       231 ~t~~t~~li~~~~l~~mk~ga~lIn~arG~~  261 (364)
T 2j6i_A          231 LHAGTKGLINKELLSKFKKGAWLVNTARGAI  261 (364)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECSCGGG
T ss_pred             CChHHHHHhCHHHHhhCCCCCEEEECCCCch
Confidence            4211  1  1345556665566777776443

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=92.73  E-value=0.079  Score=44.27  Aligned_cols=88  Identities=15%  Similarity=0.160  Sum_probs=56.5

Q ss_pred             CCcccchHHHH-HHHH-HHcCCe-EEEEEcCCc---cccccCCCCChhhhhhhcCCeEEEEecCCChH--HHHhhhhcCC
Q 023110            1 MGGTRFIGVFL-SRLL-VKEGHQ-VTLFTRGKA---PIAQQLPGESDQEFAEFSSKILHLKGDRKDYD--FVKSSLSAKG   72 (287)
Q Consensus         1 tGatG~iG~~l-~~~l-~~~g~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~--~~~~~~~~~~   72 (287)
                      +|+ |.+|... ++.+ ...|.+ |+++++++.   +.. .++          .-+++.+  |..+.+  .+.++ .. +
T Consensus       179 ~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~-~~~----------~lGa~~v--~~~~~~~~~i~~~-~g-g  242 (357)
T 2b5w_A          179 LGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTID-IIE----------ELDATYV--DSRQTPVEDVPDV-YE-Q  242 (357)
T ss_dssp             ECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHH-HHH----------HTTCEEE--ETTTSCGGGHHHH-SC-C
T ss_pred             ECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHH-HHH----------HcCCccc--CCCccCHHHHHHh-CC-C
Confidence            377 9999999 8887 777987 999999876   421 111          1345555  554322  24444 33 7


Q ss_pred             ccEEEecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           73 FDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        73 ~d~vi~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +|+||++++.. ......++.++...+++.++.
T Consensus       243 ~Dvvid~~g~~-~~~~~~~~~l~~~G~iv~~g~  274 (357)
T 2b5w_A          243 MDFIYEATGFP-KHAIQSVQALAPNGVGALLGV  274 (357)
T ss_dssp             EEEEEECSCCH-HHHHHHHHHEEEEEEEEECCC
T ss_pred             CCEEEECCCCh-HHHHHHHHHHhcCCEEEEEeC
Confidence            99999998742 234566677763347776654

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=92.72  E-value=0.12  Score=44.13  Aligned_cols=82  Identities=12%  Similarity=0.028  Sum_probs=55.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|++..+++.......           ..+++++        .+.++++  .+|+|+.+.+.
T Consensus       254 G~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-----------~~G~~vv--------~LeElL~--~ADIVv~atgt  312 (464)
T 3n58_A          254 GYGDVGKGSAQSLAGAGARVKVTEVDPICALQAA-----------MDGFEVV--------TLDDAAS--TADIVVTTTGN  312 (464)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-----------HTTCEEC--------CHHHHGG--GCSEEEECCSS
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-----------hcCceec--------cHHHHHh--hCCEEEECCCC
Confidence            5789999999999999999999988764321100           1344332        1456777  89999987764


Q ss_pred             CcccHHHHHHhCCCCccEEEEec
Q 023110           83 EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ...-....+..++....+|.++-
T Consensus       313 ~~lI~~e~l~~MK~GAILINvGR  335 (464)
T 3n58_A          313 KDVITIDHMRKMKDMCIVGNIGH  335 (464)
T ss_dssp             SSSBCHHHHHHSCTTEEEEECSS
T ss_pred             ccccCHHHHhcCCCCeEEEEcCC
Confidence            33334567777875567776664

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=92.69  E-value=0.06  Score=44.07  Aligned_cols=73  Identities=16%  Similarity=0.175  Sum_probs=45.5

Q ss_pred             CcccchHHHHHHHHHHcCC-eEEEEEcCCccc--cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI--AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |+ |-+|++++..|.+.|. +|++..|+.+..  .+.+.    ..+.. ..+......++.+.+.+.+.+.  ++|+||+
T Consensus       155 GA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la----~~~~~-~~~~~v~~~~~~~l~~~~~~l~--~~DiIIN  226 (312)
T 3t4e_A          155 GA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFA----KRVNE-NTDCVVTVTDLADQHAFTEALA--SADILTN  226 (312)
T ss_dssp             CC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHH----HHHHH-HSSCEEEEEETTCHHHHHHHHH--HCSEEEE
T ss_pred             Cc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHH----HHhhh-ccCcceEEechHhhhhhHhhcc--CceEEEE
Confidence            54 8899999999999998 899999994321  11111    00000 1123334455656544556666  7899999


Q ss_pred             cCCC
Q 023110           79 INGR   82 (287)
Q Consensus        79 ~a~~   82 (287)
                      +...
T Consensus       227 aTp~  230 (312)
T 3t4e_A          227 GTKV  230 (312)
T ss_dssp             CSST
T ss_pred             CCcC
Confidence            8754

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=92.62  E-value=0.058  Score=47.14  Aligned_cols=30  Identities=20%  Similarity=0.317  Sum_probs=26.9

Q ss_pred             cccchHHHHHHHHHHc--CCeEEEEEcCCccc
Q 023110            3 GTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~l~~~--g~~V~~~~r~~~~~   32 (287)
                      |.|++|..++..|.+.  |++|++++|++...
T Consensus        16 G~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v   47 (481)
T 2o3j_A           16 GAGYVGGPTCAMIAHKCPHITVTVVDMNTAKI   47 (481)
T ss_dssp             CCSTTHHHHHHHHHHHCTTSEEEEECSCHHHH
T ss_pred             CCCHHHHHHHHHHHhcCCCCEEEEEECCHHHH
Confidence            6899999999999998  79999999987663

>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}

Probab=92.59  E-value=0.24  Score=40.97  Aligned_cols=82  Identities=11%  Similarity=0.055  Sum_probs=54.2

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|+....   ..           ..+.     ..   ++.++++  ++|+|+.+...
T Consensus       153 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~---~~-----------~~~~-----~~---~l~ell~--~aDvV~~~~p~  208 (331)
T 1xdw_A          153 GLGRIGRVAAQIFHGMGATVIGEDVFEIKG---IE-----------DYCT-----QV---SLDEVLE--KSDIITIHAPY  208 (331)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCS---CT-----------TTCE-----EC---CHHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCccHH---HH-----------hccc-----cC---CHHHHHh--hCCEEEEecCC
Confidence            579999999999999999999999886542   11           1111     11   3556677  78988876543


Q ss_pred             Cc--cc--HHHHHHhCCCCccEEEEeccee
Q 023110           83 EA--DE--VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~--~~--~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +.  ..  ....+..++...-+|.+|...+
T Consensus       209 t~~t~~li~~~~l~~mk~ga~lin~srg~~  238 (331)
T 1xdw_A          209 IKENGAVVTRDFLKKMKDGAILVNCARGQL  238 (331)
T ss_dssp             CTTTCCSBCHHHHHTSCTTEEEEECSCGGG
T ss_pred             chHHHHHhCHHHHhhCCCCcEEEECCCccc
Confidence            21  11  1346666775567887776544

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=92.57  E-value=0.14  Score=43.71  Aligned_cols=82  Identities=15%  Similarity=0.037  Sum_probs=55.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|++.++++.......           ..+++..        .+.++++  ++|+|+.+.+.
T Consensus       227 G~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-----------~~G~~v~--------~Leeal~--~ADIVi~atgt  285 (435)
T 3gvp_A          227 GYGEVGKGCCAALKAMGSIVYVTEIDPICALQAC-----------MDGFRLV--------KLNEVIR--QVDIVITCTGN  285 (435)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTCEEC--------CHHHHTT--TCSEEEECSSC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-----------HcCCEec--------cHHHHHh--cCCEEEECCCC
Confidence            5689999999999999999999998764321110           1233221        2567787  89999998664


Q ss_pred             CcccHHHHHHhCCCCccEEEEec
Q 023110           83 EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ...-....++.++....+|.++.
T Consensus       286 ~~lI~~e~l~~MK~gailINvgr  308 (435)
T 3gvp_A          286 KNVVTREHLDRMKNSCIVCNMGH  308 (435)
T ss_dssp             SCSBCHHHHHHSCTTEEEEECSS
T ss_pred             cccCCHHHHHhcCCCcEEEEecC
Confidence            43344567778875556666654

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=92.49  E-value=0.037  Score=46.01  Aligned_cols=91  Identities=14%  Similarity=0.104  Sum_probs=55.6

Q ss_pred             CCcccchHHHHHHHHHHc--CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC-hHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d-~~~~~~~~~~~~~d~vi   77 (287)
                      +|+ |.+|...++.+...  |.+|+++++++.+.. .++        +  -+.+.+ .|..+ .+.+.++-...++|+||
T Consensus       177 ~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~-~~~--------~--lGa~~v-i~~~~~~~~~~~~~~g~g~D~vi  243 (344)
T 2h6e_A          177 NGI-GGLAVYTIQILKALMKNITIVGISRSKKHRD-FAL--------E--LGADYV-SEMKDAESLINKLTDGLGASIAI  243 (344)
T ss_dssp             ECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHH-HHH--------H--HTCSEE-ECHHHHHHHHHHHHTTCCEEEEE
T ss_pred             ECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHH-HHH--------H--hCCCEE-eccccchHHHHHhhcCCCccEEE
Confidence            377 99999999999999  999999998765521 111        1  122221 23333 33333333333799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ++++. .......++.++...+++.++.
T Consensus       244 d~~g~-~~~~~~~~~~l~~~G~iv~~g~  270 (344)
T 2h6e_A          244 DLVGT-EETTYNLGKLLAQEGAIILVGM  270 (344)
T ss_dssp             ESSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCC-hHHHHHHHHHhhcCCEEEEeCC
Confidence            99874 2245566677763346776553

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=92.46  E-value=0.14  Score=42.69  Aligned_cols=85  Identities=13%  Similarity=0.056  Sum_probs=54.0

Q ss_pred             cccchHHHHHHHHH-HcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |.|.||+.+++.|. ..|++|++.+|+.......         .  ..++.+.       .++.++++  ++|+|+.+..
T Consensus       170 G~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~---------~--~~g~~~~-------~~l~ell~--~aDvVil~vp  229 (348)
T 2w2k_A          170 GLGAIQKEIARKAVHGLGMKLVYYDVAPADAETE---------K--ALGAERV-------DSLEELAR--RSDCVSVSVP  229 (348)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHH---------H--HHTCEEC-------SSHHHHHH--HCSEEEECCC
T ss_pred             EECHHHHHHHHHHHHhcCCEEEEECCCCcchhhH---------h--hcCcEEe-------CCHHHHhc--cCCEEEEeCC
Confidence            57999999999999 8999999999886542110         0  0133321       13456676  7899887765


Q ss_pred             CCcc--cH--HHHHHhCCCCccEEEEecce
Q 023110           82 READ--EV--EPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        82 ~~~~--~~--~~ll~~~~~~~~~i~~Ss~~  107 (287)
                      .+..  ..  ..++..++...-+|.+|+..
T Consensus       230 ~~~~t~~li~~~~l~~mk~gailin~srg~  259 (348)
T 2w2k_A          230 YMKLTHHLIDEAFFAAMKPGSRIVNTARGP  259 (348)
T ss_dssp             CSGGGTTCBCHHHHHHSCTTEEEEECSCGG
T ss_pred             CChHHHHHhhHHHHhcCCCCCEEEECCCCc
Confidence            4321  11  24666676555677666654

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=92.39  E-value=0.84  Score=38.27  Aligned_cols=62  Identities=16%  Similarity=0.092  Sum_probs=46.4

Q ss_pred             ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|..|+.+++.|.+.|++|++++.++......+           .+  ..+..|..|.+.+.++.+  ++|.|+...
T Consensus         9 ~g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~-----------~~--~~~~~~~~d~~~l~~~~~--~~d~v~~~~   70 (380)
T 3ax6_A            9 GGQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQV-----------AD--EQIVAGFFDSERIEDLVK--GSDVTTYDL   70 (380)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESSTTCTTGGG-----------SS--EEEECCTTCHHHHHHHHH--TCSEEEESC
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCCCCchhhh-----------Cc--eEEECCCCCHHHHHHHHh--cCCEEEecc
Confidence            478999999999999999999987654321111           11  356778889999988886  899988643

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=92.30  E-value=0.22  Score=41.69  Aligned_cols=89  Identities=13%  Similarity=0.107  Sum_probs=54.7

Q ss_pred             CCcccchHHHHHHHHHH-cCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC--hHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d--~~~~~~~~~~~~~d~vi   77 (287)
                      +||+|.+|...++.+.. .|.+|+++++++.+.. .++          .-+++.+ .|..+  .+.+.++ ...++|+||
T Consensus       178 ~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~-~~~----------~lGad~v-i~~~~~~~~~v~~~-~~~g~Dvvi  244 (363)
T 4dvj_A          178 VGGAGGVGSIAVQIARQRTDLTVIATASRPETQE-WVK----------SLGAHHV-IDHSKPLAAEVAAL-GLGAPAFVF  244 (363)
T ss_dssp             ESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHH-HHH----------HTTCSEE-ECTTSCHHHHHHTT-CSCCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHH-HHH----------HcCCCEE-EeCCCCHHHHHHHh-cCCCceEEE
Confidence            47899999999988876 5899999999866521 111          1123322 23332  1223332 224799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEE
Q 023110           78 DINGREADEVEPILDALPNLEQFIYC  103 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~  103 (287)
                      +++|. .......++.++...+++.+
T Consensus       245 d~~g~-~~~~~~~~~~l~~~G~iv~~  269 (363)
T 4dvj_A          245 STTHT-DKHAAEIADLIAPQGRFCLI  269 (363)
T ss_dssp             ECSCH-HHHHHHHHHHSCTTCEEEEC
T ss_pred             ECCCc-hhhHHHHHHHhcCCCEEEEE
Confidence            99872 12345667777755677755

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=92.24  E-value=0.11  Score=42.42  Aligned_cols=93  Identities=16%  Similarity=0.172  Sum_probs=51.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCC-CC-ChhhhhhhcCCeEEEEecCCChHHHHhhhhc------CCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP-GE-SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~------~~~d   74 (287)
                      |.|.+|..+++.|.+.|++|++.+|++........ .. ......+...+.+++..-+-++..++.++..      ..-.
T Consensus        16 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~l~~~~~g~   95 (306)
T 3l6d_A           16 GLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLGMPGVARALAHR   95 (306)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTSTTHHHHTTTC
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcccchhhccCCC
Confidence            57999999999999999999999998765321100 00 0000111112234444444444444443320      1234


Q ss_pred             EEEecCCCCcccHHHHHHhCC
Q 023110           75 VVYDINGREADEVEPILDALP   95 (287)
Q Consensus        75 ~vi~~a~~~~~~~~~ll~~~~   95 (287)
                      +||+++.........+.+.+.
T Consensus        96 ivid~st~~~~~~~~l~~~~~  116 (306)
T 3l6d_A           96 TIVDYTTNAQDEGLALQGLVN  116 (306)
T ss_dssp             EEEECCCCCTTHHHHHHHHHH
T ss_pred             EEEECCCCCHHHHHHHHHHHH
Confidence            677777666666666665554

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=92.23  E-value=0.083  Score=43.54  Aligned_cols=68  Identities=19%  Similarity=0.222  Sum_probs=42.7

Q ss_pred             CCcccchHHHHHHHHHHcCC--eEEEEEcCCccccc---cCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQ---QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~   75 (287)
                      +| +|.+|++++..|+..|.  +|++++++......   .+.+.     ......+.+...|   .    +.++  ++|+
T Consensus        15 iG-aG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~-----~~~~~~~~i~~~~---~----~a~~--~aDi   79 (326)
T 3vku_A           15 VG-DGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDA-----LPFTSPKKIYSAE---Y----SDAK--DADL   79 (326)
T ss_dssp             EC-CSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTT-----GGGSCCCEEEECC---G----GGGT--TCSE
T ss_pred             EC-CCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhh-----hhhcCCcEEEECc---H----HHhc--CCCE
Confidence            36 49999999999999886  89999987654211   11100     0001234443322   2    3466  9999


Q ss_pred             EEecCCCC
Q 023110           76 VYDINGRE   83 (287)
Q Consensus        76 vi~~a~~~   83 (287)
                      ||.++|..
T Consensus        80 Vvi~ag~~   87 (326)
T 3vku_A           80 VVITAGAP   87 (326)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999874

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=92.21  E-value=0.18  Score=42.13  Aligned_cols=84  Identities=15%  Similarity=0.137  Sum_probs=54.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|+..... ..           ..++.        ..++.++++  .+|+|+.+...
T Consensus       183 GlG~IG~~vA~~l~~fG~~V~~~d~~~~~~~-~~-----------~~g~~--------~~~l~ell~--~aDvV~l~~Pl  240 (365)
T 4hy3_A          183 GFGDLGKALRRVLSGFRARIRVFDPWLPRSM-LE-----------ENGVE--------PASLEDVLT--KSDFIFVVAAV  240 (365)
T ss_dssp             CCSHHHHHHHHHHTTSCCEEEEECSSSCHHH-HH-----------HTTCE--------ECCHHHHHH--SCSEEEECSCS
T ss_pred             cCCcccHHHHHhhhhCCCEEEEECCCCCHHH-Hh-----------hcCee--------eCCHHHHHh--cCCEEEEcCcC
Confidence            5799999999999999999999998753311 00           12332        124667777  88988876543


Q ss_pred             Ccc----cHHHHHHhCCCCccEEEEeccee
Q 023110           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +..    -....+..++...-+|.+|...+
T Consensus       241 t~~T~~li~~~~l~~mk~gailIN~aRG~~  270 (365)
T 4hy3_A          241 TSENKRFLGAEAFSSMRRGAAFILLSRADV  270 (365)
T ss_dssp             SCC---CCCHHHHHTSCTTCEEEECSCGGG
T ss_pred             CHHHHhhcCHHHHhcCCCCcEEEECcCCch
Confidence            211    12346666775567887776554

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=92.21  E-value=0.13  Score=43.49  Aligned_cols=91  Identities=11%  Similarity=0.095  Sum_probs=55.4

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCC--ChHHHH----hhhhcCCc
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--DYDFVK----SSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~--d~~~~~----~~~~~~~~   73 (287)
                      +| +|.+|...++.+...| .+|+++++++.+.. .++          .-+++.+ .|..  +.+++.    ++....++
T Consensus       202 ~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~~~----------~lGa~~v-i~~~~~~~~~~~~~v~~~~~g~g~  268 (380)
T 1vj0_A          202 QG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLK-LAE----------EIGADLT-LNRRETSVEERRKAIMDITHGRGA  268 (380)
T ss_dssp             EC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHH-HHH----------HTTCSEE-EETTTSCHHHHHHHHHHHTTTSCE
T ss_pred             EC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHH-HHH----------HcCCcEE-EeccccCcchHHHHHHHHhCCCCC
Confidence            36 7999999999999999 69999998876521 111          1123222 2333  122332    22222379


Q ss_pred             cEEEecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           74 DVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        74 d~vi~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      |+||++++.. ......++.++...+++.++.
T Consensus       269 Dvvid~~g~~-~~~~~~~~~l~~~G~iv~~G~  299 (380)
T 1vj0_A          269 DFILEATGDS-RALLEGSELLRRGGFYSVAGV  299 (380)
T ss_dssp             EEEEECSSCT-THHHHHHHHEEEEEEEEECCC
T ss_pred             cEEEECCCCH-HHHHHHHHHHhcCCEEEEEec
Confidence            9999998742 234556677764347776553

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=92.14  E-value=0.12  Score=42.88  Aligned_cols=29  Identities=31%  Similarity=0.361  Sum_probs=26.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|.++++.|.+.|++|++.+|++..
T Consensus        15 G~G~mG~slA~~L~~~G~~V~~~dr~~~~   43 (341)
T 3ktd_A           15 GLGLIGGSLLRDLHAANHSVFGYNRSRSG   43 (341)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSCHHH
T ss_pred             eecHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            57999999999999999999999998765

>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*

Probab=92.11  E-value=0.19  Score=42.69  Aligned_cols=82  Identities=18%  Similarity=0.094  Sum_probs=50.3

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.+|+....   .            .++..       ..++.++++  ++|+|+.+...
T Consensus       152 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---~------------~~~~~-------~~~l~ell~--~aDvV~l~~P~  207 (404)
T 1sc6_A          152 GYGHIGTQLGILAESLGMYVYFYDIENKLP---L------------GNATQ-------VQHLSDLLN--MSDVVSLHVPE  207 (404)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCC---C------------TTCEE-------CSCHHHHHH--HCSEEEECCCS
T ss_pred             eECHHHHHHHHHHHHCCCEEEEEcCCchhc---c------------CCcee-------cCCHHHHHh--cCCEEEEccCC
Confidence            579999999999999999999999875431   0            11211       113556666  67777655432


Q ss_pred             Cc--cc--HHHHHHhCCCCccEEEEeccee
Q 023110           83 EA--DE--VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~--~~--~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +.  ..  ....+..++....+|.+|+..+
T Consensus       208 t~~t~~li~~~~l~~mk~ga~lIN~aRg~~  237 (404)
T 1sc6_A          208 NPSTKNMMGAKEISLMKPGSLLINASRGTV  237 (404)
T ss_dssp             STTTTTCBCHHHHHHSCTTEEEEECSCSSS
T ss_pred             ChHHHHHhhHHHHhhcCCCeEEEECCCChH
Confidence            21  00  1335556665566777776554

>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}

Probab=92.11  E-value=0.17  Score=42.48  Aligned_cols=81  Identities=19%  Similarity=0.139  Sum_probs=51.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|++|++.++......               ..        ....++.++++  ++|+|+.+...
T Consensus       126 GlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~---------------~~--------~~~~sl~ell~--~aDiV~l~~Pl  180 (381)
T 3oet_A          126 GVGNVGSRLQTRLEALGIRTLLCDPPRAARG---------------DE--------GDFRTLDELVQ--EADVLTFHTPL  180 (381)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECHHHHHTT---------------CC--------SCBCCHHHHHH--HCSEEEECCCC
T ss_pred             eECHHHHHHHHHHHHCCCEEEEECCChHHhc---------------cC--------cccCCHHHHHh--hCCEEEEcCcC
Confidence            5799999999999999999999987533210               00        11234566676  77877765433


Q ss_pred             Ccc--------cHHHHHHhCCCCccEEEEeccee
Q 023110           83 EAD--------EVEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~--------~~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +..        -....+..++...-+|.+|...+
T Consensus       181 t~~g~~~T~~li~~~~l~~mk~gailIN~aRG~v  214 (381)
T 3oet_A          181 YKDGPYKTLHLADETLIRRLKPGAILINACRGPV  214 (381)
T ss_dssp             CCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGG
T ss_pred             CccccccchhhcCHHHHhcCCCCcEEEECCCCcc
Confidence            211        12345666665566777776554

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=92.05  E-value=0.35  Score=40.64  Aligned_cols=90  Identities=10%  Similarity=0.127  Sum_probs=57.1

Q ss_pred             CCcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCC--C---hHHHHhhhhcCCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--D---YDFVKSSLSAKGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~--d---~~~~~~~~~~~~~d   74 (287)
                      +|+ |.+|...++.+...|. +|+++++++.+.. ..++          -+++.+ .|..  +   .+.+.++... ++|
T Consensus       200 ~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~-~a~~----------lGa~~v-i~~~~~~~~~~~~i~~~~~g-g~D  265 (378)
T 3uko_A          200 FGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYE-TAKK----------FGVNEF-VNPKDHDKPIQEVIVDLTDG-GVD  265 (378)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHH-HHHT----------TTCCEE-ECGGGCSSCHHHHHHHHTTS-CBS
T ss_pred             ECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHH----------cCCcEE-EccccCchhHHHHHHHhcCC-CCC
Confidence            366 8999999999998998 8999998877632 1111          233222 2332  1   2334444333 799


Q ss_pred             EEEecCCCCcccHHHHHHhCCC-CccEEEEec
Q 023110           75 VVYDINGREADEVEPILDALPN-LEQFIYCSS  105 (287)
Q Consensus        75 ~vi~~a~~~~~~~~~ll~~~~~-~~~~i~~Ss  105 (287)
                      +||++++. .......++.++. ..+++.++.
T Consensus       266 ~vid~~g~-~~~~~~~~~~l~~g~G~iv~~G~  296 (378)
T 3uko_A          266 YSFECIGN-VSVMRAALECCHKGWGTSVIVGV  296 (378)
T ss_dssp             EEEECSCC-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred             EEEECCCC-HHHHHHHHHHhhccCCEEEEEcc
Confidence            99999873 2345566777774 368876664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	287
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	6e-22
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	6e-22
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-19
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-17
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	3e-14
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	3e-13
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	8e-13
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	8e-13
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	2e-12
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	8e-12
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	2e-11
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	3e-10
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-09
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	4e-09
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	5e-09
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	2e-08
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-08
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	6e-08
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	3e-07
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	3e-06
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	3e-06
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	5e-04
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	6e-04

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 91.8 bits (227), Expect = 6e-22
 Identities = 47/269 (17%), Positives = 84/269 (31%), Gaps = 33/269 (12%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G +L+  L+++G++V    R  +    +      Q+    + K     GD  D 
Sbjct: 8   GVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDT 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEV---EP-------------ILDA-----LPNLEQF 100
             +   L     D VY++       V    P             +L+A     L    +F
Sbjct: 68  SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRF 127

Query: 101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIY 155
              S++ +Y     +P  ET    P+S +   KL    +     ES G+   +       
Sbjct: 128 YQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHE 187

Query: 156 GPL-----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210
            P          +     +  +        G+   +   GH KD  +    +L  E+   
Sbjct: 188 SPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQP-- 245

Query: 211 QVFNISGEKYVTFDGLARACAKAAGFPEP 239
           + F I+     +        A   G    
Sbjct: 246 EDFVIATGVQYSVRQFVEMAAAQLGIKLR 274

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 91.4 bits (226), Expect = 6e-22
 Identities = 46/272 (16%), Positives = 89/272 (32%), Gaps = 24/272 (8%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-ESDQEFAEFSSKILHLKGDRKD 60
           GG  FIG    R L+   +            +    G  ++    +   ++  + GD +D
Sbjct: 7   GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRD 66

Query: 61  YDFVKSS---------LSAKGFDVVYDINGREADEVEP-----ILDAL--PNLEQFIYCS 104
              +             +A+              E        +L       + + ++ S
Sbjct: 67  AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVS 126

Query: 105 SAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPL- 158
           +  VY   D     E+  ++P S +   K  ++ V      + G++    R    YGP  
Sbjct: 127 TNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQ 186

Query: 159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
           +   +   F   L  G  +P+ G G  V +  H  D  R    VL   +A  ++++I G 
Sbjct: 187 HPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAG-EIYHIGGG 245

Query: 219 KYVTFDGLARACAKAAGFPEPELVHYNPKEFD 250
             +T   L      + G     +     ++  
Sbjct: 246 LELTNRELTGILLDSLGADWSSVRKVADRKGH 277

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.7 bits (209), Expect = 1e-19
 Identities = 50/269 (18%), Positives = 92/269 (34%), Gaps = 47/269 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  F+G  L+  L+ +GH+VT+         + +              I H   +  ++
Sbjct: 8   GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-----------HWIGHENFELINH 56

Query: 62  DFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------QFIYC 103
           D V+        D +Y      +        PI     N                + +  
Sbjct: 57  DVVEPLY--IEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGARLLLA 113

Query: 104 SSAGVYLKSDLLPHCE-----TDTVDPKSR-HKGKLNTESVL----ESKGVNWTSLRPVY 153
           S++ VY   ++ P  E      + + P++   +GK   E++     + +GV     R   
Sbjct: 114 STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 173

Query: 154 IYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210
            +GP   +N   V   F  +   G P+ + GSG Q     +V DL    V ++ +  +  
Sbjct: 174 TFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS-- 231

Query: 211 QVFNISGEKYVTFDGLARACAKAAGFPEP 239
              N+   +  T    A+      G    
Sbjct: 232 SPVNLGNPEEHTILEFAQLIKNLVGSGSE 260

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 79.4 bits (195), Expect = 1e-17
 Identities = 50/304 (16%), Positives = 85/304 (27%), Gaps = 52/304 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           GG  FIG  + R ++K      V +     A   + L   S+     F         D  
Sbjct: 7   GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNF------EHADIC 60

Query: 60  DYDFVKSSLSAKGFDVVY---DINGREADEVEPILDALPNLE------------------ 98
           D   +         D V      +  +     P      N+                   
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120

Query: 99  ------QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----------KGKLNTESVL-- 139
                 +F + S+  VY         E     P                 K +++ ++  
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180

Query: 140 --ESKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
              + G+          YGP ++   +          G+P+PI G G Q+    +V+D A
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240

Query: 197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKA 256
           RA   V+   KA  + +NI G        +            P+   Y  +      +  
Sbjct: 241 RALHMVVTEGKAG-ETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPG 299

Query: 257 FPFR 260
              R
Sbjct: 300 HDRR 303

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 69.4 bits (168), Expect = 3e-14
 Identities = 32/252 (12%), Positives = 78/252 (30%), Gaps = 17/252 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T +IG  +++  +  GH   L  R     +     +  + F   +S    + G   D+
Sbjct: 10  GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDH 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC 118
             +  ++  K  DVV    G    E +  +          +  + S  G  + +      
Sbjct: 68  ASLVEAV--KNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEP 125

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
                + K++ +  +       ++G+ +T +      G   +                + 
Sbjct: 126 AKSVFEVKAKVRRAIE------AEGIPYTYVSSNCFAGY--FLRSLAQAGLTAPPRDKVV 177

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARACAKAAGFP 237
           I G G         +D+    ++ + + +   +  +       ++ + L     K     
Sbjct: 178 ILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKT 237

Query: 238 EPELVHYNPKEF 249
             E  +   +E 
Sbjct: 238 -LEKAYVPEEEV 248

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.9 bits (162), Expect = 3e-13
 Identities = 41/296 (13%), Positives = 78/296 (26%), Gaps = 32/296 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G +L+  L+++G++V    R   +    ++        A     +    GD  D
Sbjct: 8   GITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTD 67

Query: 61  YDFVKSSLSAKGFDVV-------------------YDINGREADEVEPILDA--LPNLEQ 99
              +   ++      +                    D++G     +   +    L N  +
Sbjct: 68  STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVK 127

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
           F   S++ +Y K   +P  ET    P+S +   KL    ++    E+  +   +      
Sbjct: 128 FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNH 187

Query: 155 YGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209
             P          +                 G+       GH KD   A   +L N++  
Sbjct: 188 ESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPE 247

Query: 210 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRR 265
             V        V                                K       +  R
Sbjct: 248 DFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYR 303

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 65.2 bits (157), Expect = 8e-13
 Identities = 23/254 (9%), Positives = 68/254 (26%), Gaps = 16/254 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG  +    +  GH   +  R +         +              ++    D+
Sbjct: 10  GGTGYIGKRIVNASISLGHPTYVLFRPEVVSN---IDKVQMLLYFKQLGAKLIEASLDDH 66

Query: 62  DFVKSSLSAKGFDVV-----YDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLP 116
             +  +L      +         +                  +    S  G+        
Sbjct: 67  QRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMD-----PD 121

Query: 117 HCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
             E            K      +E+  + +T +      G      + +   H +     
Sbjct: 122 IMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFA-GSLAQLDGHMMPPRDK 180

Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ-VFNISGEKYVTFDGLARACAKAAG 235
           + I G G          D+    ++ + + +   + ++       ++   + +   + + 
Sbjct: 181 VLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE 240

Query: 236 FPEPELVHYNPKEF 249
               + ++ + ++F
Sbjct: 241 QN-LDKIYISSQDF 253

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (154), Expect = 8e-13
 Identities = 27/217 (12%), Positives = 63/217 (29%), Gaps = 22/217 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G+      V+ G++VT+  R  + +  + P  +     +        K      
Sbjct: 10  GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQD 69

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
             +   L     D+       E             +++ + C+SA +      +P     
Sbjct: 70  AVI--VLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPR--- 124

Query: 122 TVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 181
               ++     +    VL   G+ + ++ P                  +   G    +  
Sbjct: 125 ---LQAVTDDHIRMHKVLRESGLKYVAVMPP-------------HIGDQPLTGA-YTVTL 167

Query: 182 SGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
            G   +++    DL    ++ L  ++        S +
Sbjct: 168 DGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQ 204

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 64.6 bits (156), Expect = 2e-12
 Identities = 44/261 (16%), Positives = 79/261 (30%), Gaps = 27/261 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L   L+K   +V           + L         +  S    ++GD ++ 
Sbjct: 23  GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL 82

Query: 62  DFV-KSSLSAKGFDVVYDINGREADEVEPILDALPNLE---------------QFIYCSS 105
           D    +            +        +PI     N++                F Y +S
Sbjct: 83  DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 142

Query: 106 AGVYLKSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTSLRPVYIYGP--- 157
           +  Y     LP  E     P S     ++  +L  +      G +   LR   ++G    
Sbjct: 143 SSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQD 202

Query: 158 --LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFN 214
               Y  V   +   +  G  + I G G       ++++  +A +        A  QV+N
Sbjct: 203 PNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYN 262

Query: 215 ISGEKYVTFDGLARACAKAAG 235
           I+     + + L  A      
Sbjct: 263 IAVGGRTSLNQLFFALRDGLA 283

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 62.4 bits (150), Expect = 8e-12
 Identities = 40/269 (14%), Positives = 74/269 (27%), Gaps = 25/269 (9%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G  L R+    GH V       K  IA++L    +    +         G   +
Sbjct: 10  GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQ---------GPLLN 60

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
                  +               +   + I       +      +   Y+ S +  H   
Sbjct: 61  NV---PLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY 117

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPI 179
                      K   E+ +   G+  T +            P   +    +  G      
Sbjct: 118 GPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHA 177

Query: 180 PGSG-IQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKAAGF 236
           P    I +  L    D+  A +Q+  +  +K +     ++ E   +   +  A ++A   
Sbjct: 178 PFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETL-SPVQVCAAFSRALNR 236

Query: 237 PEPELVHYNPKEFDFGKKKAFP--FRDQL 263
                V     E     K   P  +R+QL
Sbjct: 237 R-VTYVQVPKVEI----KVNIPVGYREQL 260

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 61.2 bits (147), Expect = 2e-11
 Identities = 41/277 (14%), Positives = 85/277 (30%), Gaps = 36/277 (12%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G +L++LL+++G++V      ++                    I +  GD  D 
Sbjct: 7   GITGQDGAYLAKLLLEKGYRVHGLVARRSSDT-----RWRLRELGIEGDIQYEDGDMADA 61

Query: 62  DFVKSSLSAKGFDVV-------------------YDINGREADEVEPILDALPNLEQFIY 102
             V+ ++       V                     ++G     +   +       +F  
Sbjct: 62  CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121

Query: 103 CSSAGVYLKSDLLPHCETDTVDPKSRHK-----GKLNTESVLESKGVNWTSLRPVYIYGP 157
            S++ ++         E     P+S +      G   T +  ES G++ +S        P
Sbjct: 122 ASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESP 181

Query: 158 LNYNPVEEW----FFHRLKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEKASRQV 212
           L               R+K G+   +  G+       G   D   A   +L  +K     
Sbjct: 182 LRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--ADD 239

Query: 213 FNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEF 249
           + ++     T   + +   +  G    + +  +P  F
Sbjct: 240 YVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFF 276

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 57.6 bits (138), Expect = 3e-10
 Identities = 47/285 (16%), Positives = 85/285 (29%), Gaps = 72/285 (25%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  + R L + G    +                              + +  D 
Sbjct: 9   GHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDS 43

Query: 62  DFVKSSLSAKGFDVVY----------DINGREADEVEPILDALPNL---------EQFIY 102
             V    +++  D VY            N   AD +   +    N+          + ++
Sbjct: 44  RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLF 103

Query: 103 CSSAGVYLKSDLLPHCETDTVDPKSRH------KGKLNTESVLES----KGVNWTSLRPV 152
             S+ +Y K    P  E++ +              K+    + ES     G ++ S+ P 
Sbjct: 104 LGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPT 163

Query: 153 YIYGPL-NYNPVEEWFFHRLK---------AGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
            +YGP  N++P        L              + + GSG  + +  HV D+A A + V
Sbjct: 164 NLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHV 223

Query: 203 LGNEKASRQ--------VFNISGEKYVTFDGLARACAKAAGFPEP 239
           +                  N+      T   LA+  AK  G+   
Sbjct: 224 MELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR 268

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 54.6 bits (130), Expect = 3e-09
 Identities = 50/294 (17%), Positives = 91/294 (30%), Gaps = 57/294 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG+ +IG      L++ GH V +       K  +   +     +           ++GD 
Sbjct: 7   GGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPT-------FVEGDI 59

Query: 59  KDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPN---------------LEQF 100
           ++   +   L     D V     +        +P+     N               ++ F
Sbjct: 60  RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNF 119

Query: 101 IYCSSAGVYLKSDLLPHCETDTVDP-------KSRHKGKLNTESVLESKGVNWTSLRPVY 153
           I+ SSA VY     +P+ E+                  ++ T+        +   LR   
Sbjct: 120 IFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFN 179

Query: 154 IYGPLNYNPVEEW----------FFHRLKAGR--PIPIPGS------GIQVTQLGHVKDL 195
             G      + E           +  ++  GR   + I G+      G  V    HV DL
Sbjct: 180 PVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL 239

Query: 196 ARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPK 247
           A   V  +          ++N+      +   +  A +KA G P     H+ P+
Sbjct: 240 ADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVN--YHFAPR 291

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 54.6 bits (130), Expect = 4e-09
 Identities = 44/280 (15%), Positives = 85/280 (30%), Gaps = 30/280 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FI   ++R L  EGH V      K     +     +    +       LK   +  
Sbjct: 22  GAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLK-VTEGV 80

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPI-------LDALPNLEQFIYCSSAG------- 107
           D V +  +  G       N         +          +  +++F Y SSA        
Sbjct: 81  DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQ 140

Query: 108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGP----- 157
           +   +  L   +    +P+      KL TE + +      G+     R   IYGP     
Sbjct: 141 LETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWK 200

Query: 158 -LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
                    +      +     + G G+Q      + +     +++   +   R+  NI 
Sbjct: 201 GGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT--KSDFREPVNIG 258

Query: 217 GEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKA 256
            ++ V+ + +A           P  +H+ P       + +
Sbjct: 259 SDEMVSMNEMAEMVLSFEEKKLP--IHHIPGPEGVRGRNS 296

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 53.8 bits (128), Expect = 5e-09
 Identities = 46/282 (16%), Positives = 77/282 (27%), Gaps = 38/282 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG      +      V +    K   A    G      A    ++  + GD  D 
Sbjct: 9   GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA----GNKANLEAILGDRVELVVGDIADA 64

Query: 62  DFVKSSLSAKGFDVVY-DINGREADEVEPILDALPNLEQFIYC--------------SSA 106
           + V    +     V Y   +  +    +P      N                     S+ 
Sbjct: 65  ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTD 124

Query: 107 GVY----LKSDLLPHC--------ETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSL 149
            VY    L+ DL  H              +P S +   K  ++ ++     S GV  T  
Sbjct: 125 EVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATIS 184

Query: 150 RPVYIYGPL-NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
                YGP  +           + AG    + G G  V    H  D +     +L   + 
Sbjct: 185 NCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRM 244

Query: 209 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD 250
                  +  +    + +     +  G P+    H   +   
Sbjct: 245 GETYLIGADGEKNNKE-VLELILEKMGQPKDAYDHVTDRAGH 285

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 52.4 bits (124), Expect = 2e-08
 Identities = 35/246 (14%), Positives = 63/246 (25%), Gaps = 33/246 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKD 60
           G T   G +L+  L+ +G++V    R  +    Q       +    +  ++ L   D  D
Sbjct: 8   GITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTD 67

Query: 61  YDFVKSSLSAKGFDVVYDI----------------------NGREADEVEPILDALPNLE 98
              ++  +     D VY++                            E            
Sbjct: 68  ASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT 127

Query: 99  QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRPVY 153
              Y + +     S   P  ET    P+S +          T +  E+ G+   +     
Sbjct: 128 VKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFN 187

Query: 154 IYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
              P          +           +     G+       G   D   A   +L  EK 
Sbjct: 188 HESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKP 247

Query: 209 SRQVFN 214
              V  
Sbjct: 248 DDYVVA 253

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 51.8 bits (122), Expect = 2e-08
 Identities = 27/232 (11%), Positives = 56/232 (24%), Gaps = 24/232 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G +   G  + + L +   +       ++   ++  G     F    +    +    +  
Sbjct: 10  GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGI 69

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDAL--------------PNLEQFIYCSSAG 107
           D +    SA           +         D                   +         
Sbjct: 70  DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVV 129

Query: 108 VYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWF 167
           V       P    + +   +    K   E  L   G  +T +R   +         E   
Sbjct: 130 VGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDK------EGGV 183

Query: 168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
              L       +      V       D+A   +Q L  E+A  + F++  + 
Sbjct: 184 RELLVGKDDELLQTDTKTV----PRADVAEVCIQALLFEEAKNKAFDLGSKP 231

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 50.9 bits (120), Expect = 6e-08
 Identities = 46/294 (15%), Positives = 87/294 (29%), Gaps = 65/294 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  F+G  L+   + +G  +     L  +G       L    + EF         + GD
Sbjct: 7   GGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEF---------VHGD 57

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEV---EPILDALPNLE---------------- 98
            ++ + V   ++    D  + + G+ A       P +D   N+                 
Sbjct: 58  IRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNC 117

Query: 99  QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL------------------- 139
             IY S+  VY   +   + ET+T           +  + L                   
Sbjct: 118 NIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 177

Query: 140 --ESKGVNWTSLRPVYIYGPLNYNPVEEWFFH---------RLKAGRPIPIPGSGIQVTQ 188
                G+N    R   +YG   +   ++ +           +    +P  I G+G QV  
Sbjct: 178 YARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 237

Query: 189 LGHVKDLARAFVQVLGNEKASR---QVFNISGEKYVTFDGLARACAKAAGFPEP 239
           + H +D+   +   L N    R        +    ++   L +           
Sbjct: 238 VLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR 291

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.5 bits (114), Expect = 3e-07
 Identities = 47/294 (15%), Positives = 84/294 (28%), Gaps = 63/294 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  +IG      L++ G+   +    +        +L   +          I   + D 
Sbjct: 8   GGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK-------HHIPFYEVDL 60

Query: 59  KDYDFVKSSLSAKGFDVV------------------YDINGREADEVEPILDALPNLEQF 100
            D   ++        D V                  Y  N      V   L    N+ +F
Sbjct: 61  CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKF 120

Query: 101 IYCSSAGVYLKS----DLLPHCETDTVDPKSRH-KGKLNTESVLES------KGVNWTSL 149
           ++ SSA VY  +    +++P  E   + P + +   K   E++L        K   +  L
Sbjct: 121 VFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAIL 180

Query: 150 RPVYIYGPLNYNPVEEWFFHR------------LKAGRPIPIPGSGIQVTQLGHVKDLAR 197
           R     G      + E                 +     + I G          ++D   
Sbjct: 181 RYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIH 240

Query: 198 AFVQVLGNEKASR------------QVFNISGEKYVTFDGLARACAKAAGFPEP 239
                 G+  A +            + +N+   K  T   +  A  KA+G   P
Sbjct: 241 VVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLP 294

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (105), Expect = 3e-06
 Identities = 31/230 (13%), Positives = 64/230 (27%), Gaps = 20/230 (8%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  L + ++++G   +VTL  R K    ++     +QE  +F     +    + 
Sbjct: 21  GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQG 80

Query: 60  DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE 119
                                G E          L + E           L S       
Sbjct: 81  HDVGFCC------LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS 134

Query: 120 TDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 179
           ++ +  + + +       V E K   ++  RP  +      +   EW   +         
Sbjct: 135 SNFLYLQVKGE---VEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKF-----FGS 186

Query: 180 PGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA 229
                       V  + RA +  +      +Q+  +  +       L +A
Sbjct: 187 LPDSWASGHSVPVVTVVRAMLNNV-VRPRDKQMELLENKAIHD---LGKA 232

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 44.8 bits (104), Expect = 3e-06
 Identities = 26/212 (12%), Positives = 52/212 (24%), Gaps = 20/212 (9%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  L   ++ E     +    +  +A+    ++                  +  
Sbjct: 9   GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGP------------LAELL 56

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
             +  S+      +   I    ++E    +D    L         G      +       
Sbjct: 57  PQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA 116

Query: 122 TVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 181
                         +++ E      T  RP  ++GP     + E     +       I  
Sbjct: 117 KSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPI-----ARILP 171

Query: 182 SGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
                       DLARA  ++   E    +  
Sbjct: 172 GKYHGI---EACDLARALWRLALEEGKGVRFV 200

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (97), Expect = 4e-05
 Identities = 46/285 (16%), Positives = 82/285 (28%), Gaps = 47/285 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRK 59
           GG  +IG      L++ G+    +     A        ES +   E + + +   + D  
Sbjct: 9   GGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDIL 68

Query: 60  DYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLP 116
           D   ++       F  V     +        +P+     NL   I             L 
Sbjct: 69  DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLV 128

Query: 117 HCETDTVDPKSRH-----------------KGKLNTESVLES-----KGVNWTSLRPVYI 154
              + TV    ++                 K K   E ++       K  N   LR    
Sbjct: 129 FSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNP 188

Query: 155 YGPLNYNPVEEW----------FFHRLKAGRPIPIP--------GSGIQVTQLGHVKDLA 196
            G      + E           +  ++  GR   +           G  V    HV DLA
Sbjct: 189 TGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLA 248

Query: 197 RAFV--QVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEP 239
           +  +       E+   +++N+      +   + +A  KA+G   P
Sbjct: 249 KGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP 293

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 39.0 bits (89), Expect = 5e-04
 Identities = 26/282 (9%), Positives = 64/282 (22%), Gaps = 52/282 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   F+   +   L++ G++V    R  + +A        +    F + +     D    
Sbjct: 18  GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAV---VEDMLKQ 74

Query: 62  DFVKSSLSAKGFDV----VYDINGREADEVEPILDALPNLEQFIYC------------SS 105
                 +           V   + +  + V P +    N  +                + 
Sbjct: 75  GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV 134

Query: 106 AGVYLKSDLLPHCETDTVDPKSRH-------------------KGKLNTESVLESKGVNW 146
           + +  K ++      +                             K   E          
Sbjct: 135 SALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDEN 194

Query: 147 TSLRPVY----------IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
                +           I+ P   +     +   L  G   P     +         D+ 
Sbjct: 195 KPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALA-LMPPQYYVSAVDIG 253

Query: 197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE 238
              +  L   +  R+    +   +  ++ +     K   +P 
Sbjct: 254 LLHLGCLVLPQIERRRVYGTAGTF-DWNTVLATFRKL--YPS 292

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 38.3 bits (87), Expect = 6e-04
 Identities = 33/280 (11%), Positives = 76/280 (27%), Gaps = 19/280 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  + + L  +  +V         I               +      K +    
Sbjct: 8   GANGQLGREIQKQLKGKNVEVIPTDVQDLDIT---------NVLAVNKFFNEKKPNVVIN 58

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
               +++                        A     + +  S+  V+      P  E D
Sbjct: 59  CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFD 118

Query: 122 T-VDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
                 +  K KL  E+ +++    +  +R  ++YG  N          +      +   
Sbjct: 119 EVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHD 178

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
             G   + +   +      V +   ++ +   F+ + +   ++   A    +  G    +
Sbjct: 179 QVGTPTSTVDLAR------VVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFRLTGID-VK 231

Query: 241 LVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWK 280
           +     +EF    K+  P    LR   +          WK
Sbjct: 232 VTPCTTEEFPRPAKR--PKYSVLRNYMLELTTGDITREWK 269

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	287
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.97
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.96
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.96
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.95
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.94
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.93
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.89
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.89
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.86
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.61
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.6
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.59
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.58
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.57
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.57
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.57
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.56
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.56
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.56
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.55
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.55
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.54
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.54
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.54
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.53
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.53
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.52
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.52
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.52
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.52
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.51
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.51
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.51
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.51
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.5
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.49
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.48
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.48
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.47
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.47
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.47
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.46
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.45
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.44
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.42
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.41
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.41
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.4
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.4
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.38
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.36
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.35
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.32
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.31
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.28
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.27
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.23
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.2
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.19
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.16
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.16
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.14
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.13
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.09
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.09
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.08
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.06
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.04
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.01
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.01
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.96
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	98.93
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.66
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.62
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	98.61
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.59
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.87
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.68
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.44
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.31
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.21
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.17
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.89
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.84
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.82
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.68
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.62
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.58
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.58
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	96.47
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.44
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.4
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	96.4
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.4
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.39
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.39
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.38
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.23
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.04
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	95.74
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.71
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.66
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.62
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	95.61
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	95.6
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.53
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.46
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	95.36
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.18
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.17
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	95.14
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.13
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	95.08
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	94.98
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.89
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	94.88
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	94.87
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	94.83
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	94.73
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	94.71
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.7
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	94.56
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	94.46
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	94.43
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.38
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	94.36
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	94.22
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.06
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.95
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.89
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	93.79
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	93.67
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	93.59
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.44
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	93.37
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	93.28
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	92.96
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	92.87
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	92.78
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	92.71
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	92.47
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	92.26
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	92.25
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	92.12
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.11
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	92.01
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.01
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	91.98
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	91.95
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	91.77
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	91.76
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	91.62
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	91.58
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.31
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	91.21
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	91.21
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	90.9
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	90.31
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	90.16
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	90.01
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	89.92
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	89.87
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	89.14
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	89.05
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	88.78
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	88.55
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	88.52
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	88.48
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	88.22
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	87.92
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	87.9
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	87.88
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	87.59
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	87.58
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	87.55
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	87.41
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	87.17
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	87.14
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	87.08
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	86.99
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.88
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	86.87
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	86.85
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	86.77
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	86.64
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	86.61
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	86.47
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	86.29
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	86.25
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	86.12
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	85.8
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	85.0
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	84.89
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	84.65
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	84.63
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	84.51
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	84.13
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	83.84
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	83.76
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	83.73
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	83.69
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	83.61
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	83.45
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	83.1
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	82.76
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	82.1
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	81.45
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	81.27
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	81.14
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	80.88

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.4e-44  Score=301.24  Aligned_cols=281  Identities=17%  Similarity=0.133  Sum_probs=207.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccc-ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|+++|+++|++|++++|..+... ..+..... .......+++++++|+.|.+++.++++..++|+|||+
T Consensus         7 TGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v~h~   85 (357)
T d1db3a_           7 TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQ-DPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNL   85 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHh-hhhhcCCCeEEEEeecCCHHHHHHHHhccCCCEEEEe
Confidence            799999999999999999999999999654311 11111111 1111146899999999999999999997788999999


Q ss_pred             CCC----------------CcccHHHHHHhCC-----CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHH
Q 023110           80 NGR----------------EADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        80 a~~----------------~~~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (287)
                      |+.                |+.++.+++++|+     +.+||||+||..|||.....|++|+++..|.++| .+|+.+|.
T Consensus        86 aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~  165 (357)
T d1db3a_          86 GAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYW  165 (357)
T ss_dssp             CCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Confidence            886                2456889999875     3457999999999998777899999999999887 99999998


Q ss_pred             Hhh----hCCCcEEEEecCeeecCCCCCCh----hHHHHHHHHcCCC-ccCCCCCCceeeeeeHHHHHHHHHHHHcCCcc
Q 023110          138 VLE----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       138 ~~~----~~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (287)
                      +++    +.+++++++||+++|||+....+    +...+..+..+.. ...++++++.++++|++|+|+++..+++++  
T Consensus       166 ~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~--  243 (357)
T d1db3a_         166 ITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE--  243 (357)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS--
T ss_pred             HHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCC--
Confidence            874    45899999999999999744332    2333444444443 445688999999999999999999998775  


Q ss_pred             CCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCcccc-----------ccC----------CCccccccccccccc
Q 023110          209 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEF-----------DFG----------KKKAFPFRDQLRRQS  267 (287)
Q Consensus       209 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~-----------~~~----------~~~~~~~~~~~~~~~  267 (287)
                      .++.||+++++.+|+.|+++.+.+.+|... .....+....           ...          ....++.......+|
T Consensus       244 ~~~~yni~sg~~~s~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d  322 (357)
T d1db3a_         244 QPEDFVIATGVQYSVRQFVEMAAAQLGIKL-RFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGD  322 (357)
T ss_dssp             SCCCEEECCCCCEEHHHHHHHHHHTTTEEE-EEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBC
T ss_pred             CCCeEEECCCCceehHHHHHHHHHHhCCcc-ccccccccccchhhhhhcccccccccCceeEeeccccCCCccccccccC
Confidence            457999999999999999999999998643 2221111110           000          000122233455678


Q ss_pred             chhhhhhcCCCcccccccc
Q 023110          268 MCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       268 ~~~k~~~~lg~~p~~~~~~  286 (287)
                      + +|++++|||+|+++++|
T Consensus       323 ~-skakk~LGw~P~~sl~e  340 (357)
T d1db3a_         323 P-TKAHEKLGWKPEITLRE  340 (357)
T ss_dssp             C-HHHHHHHCCCCCSCHHH
T ss_pred             H-HHHHHHHCCCcCCCHHH
Confidence            9 99999999999999986

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=3.3e-42  Score=287.67  Aligned_cols=266  Identities=18%  Similarity=0.246  Sum_probs=218.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEE------EEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTL------FTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~------~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~   73 (287)
                      ||||||||++|+++|+++|++|.+      +++..... ...+.      ......+++++.+|..+.........  .+
T Consensus         6 tG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~------~~~~~~~~~~~~~d~~~~~~~~~~~~--~~   77 (322)
T d1r6da_           6 TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLA------PVDADPRLRFVHGDIRDAGLLARELR--GV   77 (322)
T ss_dssp             ETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGG------GGTTCTTEEEEECCTTCHHHHHHHTT--TC
T ss_pred             ECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhh------hhhcCCCeEEEEeccccchhhhcccc--cc
Confidence            799999999999999999986544      43322110 11110      00114679999999999998888777  99


Q ss_pred             cEEEecCCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHH
Q 023110           74 DVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (287)
Q Consensus        74 d~vi~~a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (287)
                      |.|+|+|+..                +.++.+++++|.  ++++|||+||..+||.....+++|+++..|.+.| .+|..
T Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~  157 (322)
T d1r6da_          78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAG  157 (322)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHH
T ss_pred             ceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHH
Confidence            9999999773                456888999987  7899999999999999888899999999999887 99999


Q ss_pred             HHHHhh----hCCCcEEEEecCeeecCCCC-CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccC
Q 023110          135 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       135 ~E~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (287)
                      +|.+++    +.+++++++||+++|||++. ..+++.++..+..++++.+++++++.++++|++|+|+++..+++++. .
T Consensus       158 ~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~-~  236 (322)
T d1r6da_         158 SDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-A  236 (322)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-T
T ss_pred             HHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC-C
Confidence            998874    56899999999999999854 45788899999999999988999999999999999999999998876 5


Q ss_pred             CceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          210 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       210 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +++||+++++.+|+.|+++.+.+.+|.+.+.+......          +.......+|+ +|++++|||+|+++++|
T Consensus       237 ~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~~d~-~k~~~~lg~~p~~~~ee  302 (322)
T d1r6da_         237 GEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADR----------KGHDLRYSLDG-GKIERELGYRPQVSFAD  302 (322)
T ss_dssp             TCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCC----------TTCCCBCCBCC-HHHHHHHCCCCCSCHHH
T ss_pred             CCeeEEeecccchhHHHHHHHHHHhCCCccceeecCCC----------CCCCceeeeCH-HHHHHHHCCCCCCCHHH
Confidence            77999999999999999999999999876444433221          12234566888 99999999999999886

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-42  Score=283.35  Aligned_cols=259  Identities=20%  Similarity=0.276  Sum_probs=203.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||+|++|+++|+++|++|++++|........+....      ....+++...|..     ..++.  ++|+|||+|
T Consensus         7 tG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~------~~~~~d~~~~~~~-----~~~~~--~~d~VihlA   73 (312)
T d2b69a1           7 TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI------GHENFELINHDVV-----EPLYI--EVDQIYHLA   73 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT------TCTTEEEEECCTT-----SCCCC--CCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhc------CCCceEEEehHHH-----HHHHc--CCCEEEECc
Confidence            7999999999999999999999999875443222221100      0234555555553     34455  899999999


Q ss_pred             CCC----------------cccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCC-----CCCCCCcch-hhhHHHHH
Q 023110           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCET-----DTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~-----~~~~~~~~~-~~k~~~E~  137 (287)
                      +..                +.++.+++++++ ...++||+||..||+.....|.+|+     ++..|.++| .+|..+|.
T Consensus        74 a~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~  153 (312)
T d2b69a1          74 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAET  153 (312)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHH
T ss_pred             ccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHH
Confidence            862                345788999988 3358999999999997666666655     345677777 99999999


Q ss_pred             Hhh----hCCCcEEEEecCeeecCCCC---CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCC
Q 023110          138 VLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (287)
Q Consensus       138 ~~~----~~~~~~~ilR~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (287)
                      +++    +++++++++||+++|||+..   ..+++.++..+..++++.+++++.+.++++|++|++++++.++++..  +
T Consensus       154 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~--~  231 (312)
T d2b69a1         154 MCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV--S  231 (312)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC--C
T ss_pred             HHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhcc--C
Confidence            884    56899999999999999743   34678889999999999888999999999999999999999987654  5


Q ss_pred             ceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       211 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +.||++++..+++.++++.+++.+|.+. .+...+...          .......+|+ +|++++|||+|++++++
T Consensus       232 ~~~n~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~----------~~~~~~~~d~-~k~~~~lgw~p~~~l~~  295 (312)
T d2b69a1         232 SPVNLGNPEEHTILEFAQLIKNLVGSGS-EIQFLSEAQ----------DDPQKRKPDI-KKAKLMLGWEPVVPLEE  295 (312)
T ss_dssp             SCEEESCCCEEEHHHHHHHHHHHHTCCC-CEEEECCCT----------TCCCCCCBCC-HHHHHHHCCCCCSCHHH
T ss_pred             CceEecCCcccchhhHHHHHHHHhCCCC-ceEECCCCC----------CCCCeeeECH-HHHHHHHCCCCCCCHHH
Confidence            6899999999999999999999999875 444333221          1234556788 99999999999999876

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=8.5e-41  Score=281.21  Aligned_cols=277  Identities=18%  Similarity=0.143  Sum_probs=219.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++||+|++++|........+..............++++.+|+.|...+.....  +++.|+|++
T Consensus        22 TG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~~~v~~~~   99 (341)
T d1sb8a_          22 TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVDYVLHQA   99 (341)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc--ccccccccc
Confidence            799999999999999999999999997443211110000000001113679999999999998888887  899999998


Q ss_pred             CCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhh-
Q 023110           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~-  140 (287)
                      +..                +.++.+++++|.  ++++|||+||..+||.....|++|+++..|.+.| .+|..+|.+++ 
T Consensus       100 a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  179 (341)
T d1sb8a_         100 ALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADV  179 (341)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHH
Confidence            762                556889999987  7889999999999999888899999999999888 99999998874 


Q ss_pred             ---hCCCcEEEEecCeeecCCCC-----CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCc-cCCc
Q 023110          141 ---SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQ  211 (287)
Q Consensus       141 ---~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~  211 (287)
                         +.+++++++||+++|||+..     ..++..++..+..++++.+++++.+.++++|++|+|.++..++.... ..++
T Consensus       180 ~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~  259 (341)
T d1sb8a_         180 FSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQ  259 (341)
T ss_dssp             HHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSE
T ss_pred             HHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccccccce
Confidence               45799999999999998632     34677788899999999998999999999999999999999987754 3577


Q ss_pred             eEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          212 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       212 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      .|+++++...|+.++++.+.+.++.+...+...+.  +    ....+........|+ +|+++.|||+|++++++
T Consensus       260 ~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~d~-~k~~~~LGw~p~~sl~~  327 (341)
T d1sb8a_         260 VYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPV--Y----RDFREGDVRHSLADI-SKAAKLLGYAPKYDVSA  327 (341)
T ss_dssp             EEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCE--E----ECCCTTCCSBCCBCC-HHHHHHTCCCCCCCHHH
T ss_pred             eeeecccccchHHHHHHHHHHHhcccccccccccc--c----cCCCCCCcCeeeeCH-HHHHHHHCCCcCCCHHH
Confidence            99999999999999999999999865422111111  1    011122334566788 99999999999999886

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1e-40  Score=282.38  Aligned_cols=275  Identities=19%  Similarity=0.221  Sum_probs=210.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEE-EEcCCcc-ccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~-~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|+++|++.|++|++ +++.... ....+.....      ..+++++.+|++|+..+..+++..++|+|||
T Consensus         6 tG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih   79 (361)
T d1kewa_           6 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISE------SNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             ESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTT------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhh------cCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            799999999999999999998655 4433222 1112221111      4689999999999999999998778999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC-----------CCccEEEEecceeeccCCCCC----------CCCCC
Q 023110           79 INGRE----------------ADEVEPILDALP-----------NLEQFIYCSSAGVYLKSDLLP----------HCETD  121 (287)
Q Consensus        79 ~a~~~----------------~~~~~~ll~~~~-----------~~~~~i~~Ss~~v~~~~~~~~----------~~e~~  121 (287)
                      +|+..                +.++.+++++|.           ++++|||+||..+||.....+          ..|.+
T Consensus        80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~  159 (361)
T d1kewa_          80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence            99863                344678888874           245899999999998643222          33555


Q ss_pred             CCCCCcch-hhhHHHHHHhh----hCCCcEEEEecCeeecCCCC-CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      +..|.+.| .+|+.+|.++.    +.+++++++||+++|||+.. ..+++.++..+..++++.+++++++.++++|++|+
T Consensus       160 ~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~  239 (361)
T d1kewa_         160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHH
Confidence            66777777 99999999884    46899999999999999754 45778899999999999888999999999999999


Q ss_pred             HHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhc
Q 023110          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLS  275 (287)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  275 (287)
                      |+++..++++.. .++.||++++...|..|+++.+.+.++...+...... .....  ....+.......+|+ +|++++
T Consensus       240 a~ai~~~~~~~~-~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~d~-~k~~~~  314 (361)
T d1kewa_         240 ARALHMVVTEGK-AGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYR-EQITY--VADRPGHDRRYAIDA-GKISRE  314 (361)
T ss_dssp             HHHHHHHHHHCC-TTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGG-GGEEE--ECCCTTCCCBCCBCC-HHHHHH
T ss_pred             HHHHHHHHhcCC-CCCeEEECCCCCcchHHHHhHhhhhcccccccccCcc-cceee--cCCCCCCCceeeeCH-HHHHHH
Confidence            999999998876 4679999999999999999999988754321111110 11110  111122345667898 999999


Q ss_pred             CCCcccccccc
Q 023110          276 LTWWKVLQTHT  286 (287)
Q Consensus       276 lg~~p~~~~~~  286 (287)
                      |||+|+++++|
T Consensus       315 lgw~P~~~l~e  325 (361)
T d1kewa_         315 LGWKPLETFES  325 (361)
T ss_dssp             HCCCCSCCHHH
T ss_pred             HCCCCCCCHHH
Confidence            99999999986

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-38  Score=269.12  Aligned_cols=282  Identities=16%  Similarity=0.127  Sum_probs=212.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|+++|+++||+|++++|..+.. ...+..+..........+++++.+|+.|.+.+..++...++++|+|+
T Consensus         7 TG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~v~~~   86 (347)
T d1t2aa_           7 TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNL   86 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcccceeeee
Confidence            79999999999999999999999999976531 11111111111122235789999999999999999988889999999


Q ss_pred             CCCC----------------cccHHHHHHhCC-----CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHH
Q 023110           80 NGRE----------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        80 a~~~----------------~~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~  137 (287)
                      ++..                +.++.+++++++     +.++|||+||..|||.....+++|+++..|.++| .+|..+|+
T Consensus        87 ~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~  166 (347)
T d1t2aa_          87 GAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYW  166 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             eeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            8763                446788888875     3458999999999998777889999999999887 99999999


Q ss_pred             Hhh----hCCCcEEEEecCeeecCCCCCCh-----hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCcc
Q 023110          138 VLE----SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       138 ~~~----~~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (287)
                      ++.    +.+++++++||+++|||+.....     ...++.......++..++++.+.++++|++|+++++..++++.. 
T Consensus       167 ~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~-  245 (347)
T d1t2aa_         167 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE-  245 (347)
T ss_dssp             HHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS-
T ss_pred             HHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCC-
Confidence            874    46899999999999999643322     22344455556677777899999999999999999999998875 


Q ss_pred             CCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccc-c----------CCCcccccccccccccchhhhhhcCC
Q 023110          209 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD-F----------GKKKAFPFRDQLRRQSMCSDGNLSLT  277 (287)
Q Consensus       209 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~-~----------~~~~~~~~~~~~~~~~~~~k~~~~lg  277 (287)
                       .+.|+++.....+..+....+...+++.. .....+..... .          .....++.....+.+|+ +|++++||
T Consensus       246 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~-skak~~Lg  322 (347)
T d1t2aa_         246 -PEDFVIATGEVHSVREFVEKSFLHIGKTI-VWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC-TKAKQKLN  322 (347)
T ss_dssp             -CCCEEECCSCCEEHHHHHHHHHHHTTCCE-EEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCC-HHHHHHHC
T ss_pred             -Cccceeccccccccchhhhhhhhhhccee-eecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeECH-HHHHHHHC
Confidence             35789999899999999999999998754 22222111110 0          00111223344566789 99999999


Q ss_pred             Ccccccccc
Q 023110          278 WWKVLQTHT  286 (287)
Q Consensus       278 ~~p~~~~~~  286 (287)
                      |+|+++++|
T Consensus       323 w~P~~sl~e  331 (347)
T d1t2aa_         323 WKPRVAFDE  331 (347)
T ss_dssp             CCCCSCHHH
T ss_pred             CCcCCCHHH
Confidence            999999886

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=8.1e-39  Score=266.87  Aligned_cols=271  Identities=17%  Similarity=0.158  Sum_probs=212.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcccc-ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|+++|+++||+|++++|..+... ..+..      .....+++++.+|+.|...+.+.+....+++++|+
T Consensus         6 tG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~------~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~   79 (321)
T d1rpna_           6 TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRE------LGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL   79 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHH------TTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHH------hcccCCcEEEEccccChHHhhhhhccccccccccc
Confidence            799999999999999999999999999765421 11100      00135799999999999999999987788899999


Q ss_pred             CCCC----------------cccHHHHHHhCC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHh
Q 023110           80 NGRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        80 a~~~----------------~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (287)
                      ++..                +.++.+++++++  + .++|++.||..+|+.....+.+|+++..|.++| .+|..+|.++
T Consensus        80 a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  159 (321)
T d1rpna_          80 AAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWIT  159 (321)
T ss_dssp             CSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             cccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHH
Confidence            8762                456788999987  4 457889999999988888888999999999888 9999999987


Q ss_pred             h----hCCCcEEEEecCeeecCCCCCCh----hHHHHHHHHcC-CCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCC
Q 023110          140 E----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (287)
Q Consensus       140 ~----~~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (287)
                      .    ..+++++++||+++|||......    +..++..+..+ .+....+++++.++++|++|+|+++..+++++.  +
T Consensus       160 ~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~--~  237 (321)
T d1rpna_         160 VNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--A  237 (321)
T ss_dssp             HHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--C
T ss_pred             HHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC--c
Confidence            4    46899999999999999643322    22233333333 444456889999999999999999999998875  4


Q ss_pred             ceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCccccccccC
Q 023110          211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHTT  287 (287)
Q Consensus       211 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~~  287 (287)
                      +.||+++++..|+.++++.+.+.+|.+.+.+........       ++........|+ +|++++|||+|+++++|+
T Consensus       238 ~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-------rp~~~~~~~~d~-~k~~k~lG~~P~~~l~e~  306 (321)
T d1rpna_         238 DDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFF-------RPAEVDVLLGNP-AKAQRVLGWKPRTSLDEL  306 (321)
T ss_dssp             CCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGC-------CSSCCCBCCBCT-HHHHHHHCCCCCSCHHHH
T ss_pred             CCceecccccceehhhhHHHHHHhCCCccceeecCCCCC-------CCCccCCccCCH-HHHHHHHCCCcCCCHHHH
Confidence            689999999999999999999999986533333322221       122335566788 999999999999998863

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.4e-38  Score=267.26  Aligned_cols=269  Identities=22%  Similarity=0.277  Sum_probs=205.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhh-hhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|++.|+++|++|++++|........+.     .. .....+++++++|+.|.+.+.++++..++|+|||+
T Consensus         6 tG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           6 TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLP-----VIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHH-----HHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHH-----HHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            7999999999999999999999999875443211110     11 11135899999999999999999998899999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCC-CCCCCcch-hhhHHHHHHh
Q 023110           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD-TVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        80 a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~-~~~~~~~~-~~k~~~E~~~  139 (287)
                      |+..                +.++.+++++|+  ++++||++||..+|+.....+..|.. ...|...| .+|..+|.++
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~  160 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHH
Confidence            9862                446888999997  89999999999999876665555554 44666666 9999999887


Q ss_pred             hh-----CCCcEEEEecCeeecCCCC-----------CChhHHHHHHHHcC-CCccCCC------CCCceeeeeeHHHHH
Q 023110          140 ES-----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAG-RPIPIPG------SGIQVTQLGHVKDLA  196 (287)
Q Consensus       140 ~~-----~~~~~~ilR~~~v~g~~~~-----------~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~D~a  196 (287)
                      .+     .+++++++|++++|||+..           ..+++.++.....+ .++.+++      ++.+.++++|++|++
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~  240 (338)
T d1udca_         161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA  240 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHH
T ss_pred             HHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehh
Confidence            42     4799999999999998532           12445555555443 3454444      477889999999999


Q ss_pred             HHHHHHHcC--CccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhh
Q 023110          197 RAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNL  274 (287)
Q Consensus       197 ~~~~~~~~~--~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  274 (287)
                      .+...+...  ....+++||+++++.+|+.|+++.+.+.+|.+. .+...+...          .......+|+ +|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~-~~~~~~~~~----------~~~~~~~~d~-~k~~~  308 (338)
T d1udca_         241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPV-NYHFAPRRE----------GDLPAYWADA-SKADR  308 (338)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCC-CEEEECCCT----------TCCSBCCBCC-HHHHH
T ss_pred             hhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCC-ceEECCCCC----------CCCCEeeECH-HHHHH
Confidence            887776653  333467999999999999999999999999766 444433211          1234556899 99999


Q ss_pred             cCCCcccccccc
Q 023110          275 SLTWWKVLQTHT  286 (287)
Q Consensus       275 ~lg~~p~~~~~~  286 (287)
                      +|||+|++++++
T Consensus       309 ~lgwkp~~~l~e  320 (338)
T d1udca_         309 ELNWRVTRTLDE  320 (338)
T ss_dssp             HHCCCCCCCHHH
T ss_pred             HHCCCcCCCHHH
Confidence            999999999986

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=3.5e-38  Score=265.66  Aligned_cols=268  Identities=17%  Similarity=0.148  Sum_probs=211.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|.++.++...........    -.....+++++.+|+.|.+.+..+++  +++.|+|+|
T Consensus         8 TGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~----~~~~~~~i~~~~~Di~d~~~~~~~~~--~~~~v~~~a   81 (346)
T d1oc2a_           8 TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL----EAILGDRVELVVGDIADAELVDKLAA--KADAIVHYA   81 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT----GGGCSSSEEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             eCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH----HHhhcCCeEEEEccCCCHHHHHHHHh--hhhhhhhhh
Confidence            799999999999999999998777766532211000000    00013689999999999999999998  899999998


Q ss_pred             CCC----------------cccHHHHHHhCC-CCccEEEEecceeeccC------------CCCCCCCCCCCCCCcch-h
Q 023110           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKS------------DLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~------------~~~~~~e~~~~~~~~~~-~  130 (287)
                      +..                +.++.++++++. ...++|++||..+||..            .....+|.++..|.+.| .
T Consensus        82 ~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~  161 (346)
T d1oc2a_          82 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSS  161 (346)
T ss_dssp             SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHH
T ss_pred             hcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHHHH
Confidence            763                446888999887 45689999999999742            12346677777888877 9


Q ss_pred             hhHHHHHHhh----hCCCcEEEEecCeeecCCCC-CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcC
Q 023110          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       131 ~k~~~E~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (287)
                      +|..+|.+++    ..+++++++||+++|||+.. ...+..++..+..+.++.+++++.+.++++|++|+|++++.++.+
T Consensus       162 sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~  241 (346)
T d1oc2a_         162 TKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTK  241 (346)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhh
Confidence            9999998874    46899999999999999753 456677778888888888889999999999999999999999887


Q ss_pred             CccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccc-cc
Q 023110          206 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVL-QT  284 (287)
Q Consensus       206 ~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~-~~  284 (287)
                      +. .++.|++++++..++.++++.+.+.++.+...+...+..          +....++.+|+ +|++++|||+|++ ++
T Consensus       242 ~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~~d~-~k~~~~LGw~P~~t~l  309 (346)
T d1oc2a_         242 GR-MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDR----------AGHDLRYAIDA-SKLRDELGWTPQFTDF  309 (346)
T ss_dssp             CC-TTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCC----------TTCCCBCCBCC-HHHHHHHCCCCSCCCH
T ss_pred             cc-cCccccccccccccchHHHHHHHHHhCCCCcceEECCCC----------CCCCceeeeCH-HHHHHHHCCCCcCCCH
Confidence            76 567999999999999999999999999865444433222          11234556789 9999999999997 58


Q ss_pred             cc
Q 023110          285 HT  286 (287)
Q Consensus       285 ~~  286 (287)
                      +|
T Consensus       310 ~e  311 (346)
T d1oc2a_         310 SE  311 (346)
T ss_dssp             HH
T ss_pred             HH
Confidence            76

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.8e-38  Score=266.00  Aligned_cols=258  Identities=18%  Similarity=0.201  Sum_probs=204.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++||+|++++|.........           ....++..+|+.+.+.+..+++  ++|+|||++
T Consensus        21 TGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~--~~d~Vih~a   87 (363)
T d2c5aa1          21 TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-----------MFCDEFHLVDLRVMENCLKVTE--GVDHVFNLA   87 (363)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-----------GTCSEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhh-----------cccCcEEEeechhHHHHHHHhh--cCCeEeecc
Confidence            799999999999999999999999988655421111           2466889999999999999998  999999998


Q ss_pred             CCC-----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCC-------CCCCCCCCcch-hhhH
Q 023110           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHC-------ETDTVDPKSRH-KGKL  133 (287)
Q Consensus        81 ~~~-----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~-------e~~~~~~~~~~-~~k~  133 (287)
                      +..                 +.++.++++++.  ++++||++||..+|+.....+..       |..+..|.+.| .+|.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~  167 (363)
T d2c5aa1          88 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL  167 (363)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred             cccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHH
Confidence            763                 345788999886  88999999999999865544433       33455677766 9999


Q ss_pred             HHHHHhh----hCCCcEEEEecCeeecCCCCC------ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          134 NTESVLE----SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       134 ~~E~~~~----~~~~~~~ilR~~~v~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      .+|.+++    ..+++++++||+++|||++..      ..................++++.+.++++|++|+++++..++
T Consensus       168 ~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~  247 (363)
T d2c5aa1         168 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT  247 (363)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHH
Confidence            9998874    458999999999999987421      122333444555566677788999999999999999999998


Q ss_pred             cCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCccccc
Q 023110          204 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQ  283 (287)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~  283 (287)
                      +..  .++.||+++++.+|+.++++.+.+.+|++. .+...+...           ......+|+ +|++++|||+|+++
T Consensus       248 ~~~--~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~-~i~~~~~~~-----------~~~~~~~d~-ska~~~LGw~p~~s  312 (363)
T d2c5aa1         248 KSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKL-PIHHIPGPE-----------GVRGRNSDN-NLIKEKLGWAPNMR  312 (363)
T ss_dssp             HSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCC-CEEEECCCC-----------CCSBCEECC-HHHHHHHSCCCCCC
T ss_pred             hCC--CCCeEEEecCCcccHHHHHHHHHHHhCCCC-ceEeCCCCC-----------CccccccCH-HHHHHHhCCCCCCC
Confidence            765  467999999999999999999999999876 444443321           124445788 99999999999999


Q ss_pred             ccc
Q 023110          284 THT  286 (287)
Q Consensus       284 ~~~  286 (287)
                      +++
T Consensus       313 lee  315 (363)
T d2c5aa1         313 LKE  315 (363)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            986

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-37  Score=262.45  Aligned_cols=272  Identities=18%  Similarity=0.186  Sum_probs=205.5

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHh-hhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-SLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~-~~~~~~~d~vi~   78 (287)
                      ||||||||++|+++|+++| ++|+++++..........          ..+++++++|+++.+.+.+ +++  ++|+|||
T Consensus         6 TG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~----------~~~~~~i~~Di~~~~~~~~~~~~--~~d~Vih   73 (342)
T d2blla1           6 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP   73 (342)
T ss_dssp             ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----------CTTEEEEECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc----------CCCeEEEECccCChHHHHHHHHh--CCCcccc
Confidence            7999999999999999998 589999987655333333          4689999999988766555 555  8999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCC-------CCCCCcch-hhhH
Q 023110           79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-------TVDPKSRH-KGKL  133 (287)
Q Consensus        79 ~a~~~----------------~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~-------~~~~~~~~-~~k~  133 (287)
                      +|+..                +.++.++++++. ...++++.||..+|+........|..       ...|...| .+|.
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~  153 (342)
T d2blla1          74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  153 (342)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHH
T ss_pred             ccccccccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhccc
Confidence            99873                456888999987 55677899999999876554444332       33455556 8999


Q ss_pred             HHHHHhh----hCCCcEEEEecCeeecCCCC---------CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       134 ~~E~~~~----~~~~~~~ilR~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      .+|.++.    +.+++++++|++.+|||+..         ......++..++.++++.+++++++.++++|++|+|+++.
T Consensus       154 ~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~  233 (342)
T d2blla1         154 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  233 (342)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHH
T ss_pred             chhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceee
Confidence            9998874    45899999999999998632         1246677888889999988899999999999999999999


Q ss_pred             HHHcCCc--cCCceEEecCCc-ccCHHHHHHHHHHHhCCCCCeEEeCCccccc-cCC----Ccccccccccccccchhhh
Q 023110          201 QVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKAAGFPEPELVHYNPKEFD-FGK----KKAFPFRDQLRRQSMCSDG  272 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~k~  272 (287)
                      .+++++.  ..+++||+++++ .+|+.++++.+.+.+|... .....+..... ...    ............+|+ +|+
T Consensus       234 ~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~k~  311 (342)
T d2blla1         234 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP-LRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSI-RNA  311 (342)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCT-TGGGSCCCCCEEEC------------CCCCCBCC-HHH
T ss_pred             eehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCc-cccccCcccccceeccccccccccccccccccCH-HHH
Confidence            9998753  357899998765 4899999999999998664 32322222111 000    111111224455788 999


Q ss_pred             hhcCCCcccccccc
Q 023110          273 NLSLTWWKVLQTHT  286 (287)
Q Consensus       273 ~~~lg~~p~~~~~~  286 (287)
                      +++|||+|+++++|
T Consensus       312 ~~~lgw~P~~slee  325 (342)
T d2blla1         312 HRCLDWEPKIDMQE  325 (342)
T ss_dssp             HHHHCCCCCCCHHH
T ss_pred             HHHHCCCcCCCHHH
Confidence            99999999999886

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=8.1e-37  Score=256.54  Aligned_cols=276  Identities=16%  Similarity=0.116  Sum_probs=203.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|+++|+++||+|++++|..+.. ...+..+...........++++.+|+.+.+.+...++..++|+|||+
T Consensus         7 TGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D~Vih~   86 (339)
T d1n7ha_           7 TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNL   86 (339)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             eCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccchhhhc
Confidence            79999999999999999999999999975431 12222211111111135688999999999999999987789999999


Q ss_pred             CCCC----------------cccHHHHHHhCC-------CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHH
Q 023110           80 NGRE----------------ADEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (287)
Q Consensus        80 a~~~----------------~~~~~~ll~~~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (287)
                      |+..                ..++.+++++++       ...++++.||..+|+... .+.+|+++..|.+.| .+|..+
T Consensus        87 Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~-~~~~E~~~~~p~~~Y~~sK~~~  165 (339)
T d1n7ha_          87 AAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP-PPQSETTPFHPRSPYAASKCAA  165 (339)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC-SSBCTTSCCCCCSHHHHHHHHH
T ss_pred             cccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC-CCCCCCCCCCCcchhhHHHHHH
Confidence            9873                233566666654       345678888888876654 468999999998887 999999


Q ss_pred             HHHh----hhCCCcEEEEecCeeecCCCCCChhHH-H----HHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC
Q 023110          136 ESVL----ESKGVNWTSLRPVYIYGPLNYNPVEEW-F----FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       136 E~~~----~~~~~~~~ilR~~~v~g~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (287)
                      |.++    +..+++++++||+++|||+....+... +    ........+..+.+++.+.++++|++|+|+++..++.++
T Consensus       166 E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         166 HWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcC
Confidence            9876    456899999999999999754333222 2    222333444555688899999999999999999999987


Q ss_pred             ccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          207 KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       207 ~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      ..  ..+++..+...+..++++.+.+.++...+....+.....       ++.....+.+|+ +|++++|||+|++++++
T Consensus       246 ~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-------r~~~~~~~~~d~-~Kak~~LGw~P~~~le~  315 (339)
T d1n7ha_         246 KP--DDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYF-------RPAEVDNLQGDA-SKAKEVLGWKPQVGFEK  315 (339)
T ss_dssp             SC--CEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGS-------CSSCCCBCCBCC-HHHHHHHCCCCCSCHHH
T ss_pred             CC--CccccccccccccchhhhhhhhhhhcccCceeeeccCCC-------CCCCCCeeeECH-HHHHHHHCCCcCCCHHH
Confidence            63  466777778899999999999999976433222222111       223345566788 99999999999999986


Q ss_pred             C
Q 023110          287 T  287 (287)
Q Consensus       287 ~  287 (287)
                      +
T Consensus       316 g  316 (339)
T d1n7ha_         316 L  316 (339)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3e-36  Score=253.88  Aligned_cols=270  Identities=19%  Similarity=0.199  Sum_probs=201.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|+++++..........    ........+++++++|+.|.+.+..+++..++|+|||+|
T Consensus         7 TGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~----~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~VihlA   82 (347)
T d1z45a2           7 TGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVA----RLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFA   82 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHH----HHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEECC
T ss_pred             eCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHH----hHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEcc
Confidence            7999999999999999999999999864433111000    000011357999999999999999999888999999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCC----CCCCCCCCCCCCCcch-hhhHHHHH
Q 023110           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD----LLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~----~~~~~e~~~~~~~~~~-~~k~~~E~  137 (287)
                      +..                +.++.+++++|+  ++++||++||..+||...    ..+++|+.+..|.+.| .+|..+|.
T Consensus        83 a~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~  162 (347)
T d1z45a2          83 GLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIEN  162 (347)
T ss_dssp             SCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHHH
Confidence            873                345788999987  889999999999998543    3568888888888877 99999998


Q ss_pred             Hhh------hCCCcEEEEecCeeecCCCC-----------CChhHHHHHHHHc-CCCccCCCC------CCceeeeeeHH
Q 023110          138 VLE------SKGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKA-GRPIPIPGS------GIQVTQLGHVK  193 (287)
Q Consensus       138 ~~~------~~~~~~~ilR~~~v~g~~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~i~~~  193 (287)
                      ++.      ..+++++++|++++||+...           ..+++.++..+.. ++++.++++      +...++++++.
T Consensus       163 ~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~  242 (347)
T d1z45a2         163 ILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVV  242 (347)
T ss_dssp             HHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHH
T ss_pred             HHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeee
Confidence            774      24789999999999997421           1244444444443 345666554      34577899999


Q ss_pred             HHHHHHHHHHcCC------ccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCccccccccccccc
Q 023110          194 DLARAFVQVLGNE------KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQS  267 (287)
Q Consensus       194 D~a~~~~~~~~~~------~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (287)
                      |.+.+++.+++..      ...+++||+++++++|+.|+++.+.+.+|.+. .+...+..          +.......+|
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~-~~~~~~~~----------~~~~~~~~~d  311 (347)
T d1z45a2         243 DLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDL-PYKVTGRR----------AGDVLNLTAK  311 (347)
T ss_dssp             HHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCC-CC-------------------CCCCCBC
T ss_pred             cccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCC-ceEeCCCC----------CCCCCEeeEC
Confidence            9998888877531      22467999999999999999999999999876 32222111          1123455678


Q ss_pred             chhhhhhcCCCcccccccc
Q 023110          268 MCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       268 ~~~k~~~~lg~~p~~~~~~  286 (287)
                      + +|++++|||+|+++++|
T Consensus       312 ~-sk~~~~lGw~p~~~lee  329 (347)
T d1z45a2         312 P-DRAKRELKWQTELQVED  329 (347)
T ss_dssp             C-HHHHHHTCCCCCCCHHH
T ss_pred             H-HHHHHHHCCCCCCCHHH
Confidence            8 99999999999999986

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-35  Score=244.93  Aligned_cols=274  Identities=18%  Similarity=0.152  Sum_probs=202.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCC-Chhhh-hhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE-SDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~-~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|+++|+++|++|++++|............ ..... .....+++++++|+.|.+.+..++...++++++|
T Consensus         8 TG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~~~i~h   87 (346)
T d1ek6a_           8 TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIH   87 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccccccccc
Confidence            799999999999999999999999987433311111100 00111 1124679999999999999999998888999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCC-CCCCCCCcch-hhhHHHHHH
Q 023110           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE-TDTVDPKSRH-KGKLNTESV  138 (287)
Q Consensus        79 ~a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e-~~~~~~~~~~-~~k~~~E~~  138 (287)
                      +|+..                +.++.+++++++  ++++|||+||..+|+........+ .....+.++| .+|..+|..
T Consensus        88 ~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~  167 (346)
T d1ek6a_          88 FAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM  167 (346)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred             cccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHHHHHHHH
Confidence            99873                446788999987  889999999999998765433332 2334556656 999999987


Q ss_pred             hh-----hCCCcEEEEecCeeecCCCC-----------CChhHHHHHHHHc-CCCccCC------CCCCceeeeeeHHHH
Q 023110          139 LE-----SKGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKA-GRPIPIP------GSGIQVTQLGHVKDL  195 (287)
Q Consensus       139 ~~-----~~~~~~~ilR~~~v~g~~~~-----------~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~i~~~D~  195 (287)
                      +.     ..+++.+++|++.+|||...           ..+.+.++..+.. +.++.++      .++.+.++++|++|+
T Consensus       168 ~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~  247 (346)
T d1ek6a_         168 IRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDL  247 (346)
T ss_dssp             HHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHH
T ss_pred             HHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEec
Confidence            64     25899999999999998531           1234444544443 3344332      357778999999999


Q ss_pred             HHHHHHHHcC--CccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhh
Q 023110          196 ARAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGN  273 (287)
Q Consensus       196 a~~~~~~~~~--~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~  273 (287)
                      |.++..++..  ....+++||+++++.+|+.|+++.+.+.+|.+. ++...+..          +........|+ +|++
T Consensus       248 a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~-~~~~~~~~----------~~e~~~~~~d~-~k~~  315 (346)
T d1ek6a_         248 AKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI-PYKVVARR----------EGDVAACYANP-SLAQ  315 (346)
T ss_dssp             HHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCC-CEEEECCC----------TTCCSEECBCC-HHHH
T ss_pred             cchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCC-CeEECCCC----------CCCCCEeeECH-HHHH
Confidence            9998887543  233567999999999999999999999999876 44443322          11235566788 9999


Q ss_pred             hcCCCcccccccc
Q 023110          274 LSLTWWKVLQTHT  286 (287)
Q Consensus       274 ~~lg~~p~~~~~~  286 (287)
                      ++|||+|++++||
T Consensus       316 ~~lgw~p~~slee  328 (346)
T d1ek6a_         316 EELGWTAALGLDR  328 (346)
T ss_dssp             HTTCCCCCCCHHH
T ss_pred             HHHCCCcCCCHHH
Confidence            9999999999987

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.5e-35  Score=250.67  Aligned_cols=274  Identities=15%  Similarity=0.125  Sum_probs=197.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcc---c---cccCCCCC-hh----hh-hhhcCCeEEEEecCCChHHHHhhh
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP---I---AQQLPGES-DQ----EF-AEFSSKILHLKGDRKDYDFVKSSL   68 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~---~---~~~~~~~~-~~----~~-~~~~~~~~~i~~D~~d~~~~~~~~   68 (287)
                      ||||||||++|+++|+++||+|++++.-...   .   ...+.... ..    .. .....+++++++|+.|.+.+..++
T Consensus         7 TGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~   86 (393)
T d1i24a_           7 IGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESF   86 (393)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHHHHHHH
Confidence            7999999999999999999999999731100   0   00111100 00    00 111367999999999999999999


Q ss_pred             hcCCccEEEecCCCC-------------------cccHHHHHHhCC--CC-ccEEEEecceeeccCCCCCCC--------
Q 023110           69 SAKGFDVVYDINGRE-------------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHC--------  118 (287)
Q Consensus        69 ~~~~~d~vi~~a~~~-------------------~~~~~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~--------  118 (287)
                      +..++|+|||+|+..                   +.++.+++++|+  +. +++++.||..+|+.... +..        
T Consensus        87 ~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~~~~~~~~  165 (393)
T d1i24a_          87 KSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIEEGYITITH  165 (393)
T ss_dssp             HHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-CBCSSEEEEEE
T ss_pred             HhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccc-ccccccccccc
Confidence            977899999999852                   446888999887  44 56788888888865332 111        


Q ss_pred             ------CCCCCCCCcch-hhhHHHHHHh----hhCCCcEEEEecCeeecCCCC------------------CChhHHHHH
Q 023110          119 ------ETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY------------------NPVEEWFFH  169 (287)
Q Consensus       119 ------e~~~~~~~~~~-~~k~~~E~~~----~~~~~~~~ilR~~~v~g~~~~------------------~~~~~~~~~  169 (287)
                            +..+..|.++| .+|+.+|.++    ++.+++++++||+++|||+..                  ..++..++.
T Consensus       166 ~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  245 (393)
T d1i24a_         166 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCV  245 (393)
T ss_dssp             TTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHH
T ss_pred             cccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccchhhhhH
Confidence                  12345677766 9999999887    466899999999999998632                  124567788


Q ss_pred             HHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEe-cCCcccCHHHHHHHHHHHhCC---CCCeEEeCC
Q 023110          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGEKYVTFDGLARACAKAAGF---PEPELVHYN  245 (287)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i-~~~~~~s~~e~~~~i~~~~g~---~~~~~~~~~  245 (287)
                      ....++++.+++++.+.++|+|++|+++++..++++....+..+.+ .+++.+|+.++++.+.+..+.   .. .....+
T Consensus       246 ~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~-~~~~~~  324 (393)
T d1i24a_         246 QAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDV-KKMTVP  324 (393)
T ss_dssp             HHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCC-CEEEEC
T ss_pred             HhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCc-ceeecc
Confidence            8889999999999999999999999999999999987765544333 455779999999999887643   32 222222


Q ss_pred             ccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          246 PKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      ...        .+.....+..|+ +|++ +|||+|++++++
T Consensus       325 ~~~--------~~~~~~~~~~d~-~k~~-~LGw~P~~~~~~  355 (393)
T d1i24a_         325 NPR--------VEAEEHYYNAKH-TKLM-ELGLEPHYLSDS  355 (393)
T ss_dssp             CSS--------CSCSSCCCCBCC-CHHH-HTTCCCCCCCHH
T ss_pred             CCC--------CCCCccEecCCH-HHHH-HcCCccccCHHH
Confidence            111        112234555677 8987 499999998875

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=1.6e-34  Score=246.40  Aligned_cols=274  Identities=19%  Similarity=0.232  Sum_probs=199.3

Q ss_pred             CCcccchHHHHHHHHHH-cCCeEEEEEcCCccc--cccCCCCC----------hhhhhhhcCCeEEEEecCCChHHHHhh
Q 023110            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPI--AQQLPGES----------DQEFAEFSSKILHLKGDRKDYDFVKSS   67 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~-~g~~V~~~~r~~~~~--~~~~~~~~----------~~~~~~~~~~~~~i~~D~~d~~~~~~~   67 (287)
                      ||||||||++|+++|++ .||+|+++++-....  ...+....          ..........+.++.+|+.|.+.+.++
T Consensus         8 TG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~   87 (383)
T d1gy8a_           8 CGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGV   87 (383)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHHhhhh
Confidence            79999999999999996 589999998521110  00000000          000000124688999999999999999


Q ss_pred             hhcC-CccEEEecCCCC----------------cccHHHHHHhCC--CCccEEEEecceeeccCC-------CCCCCCCC
Q 023110           68 LSAK-GFDVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD-------LLPHCETD  121 (287)
Q Consensus        68 ~~~~-~~d~vi~~a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~-------~~~~~e~~  121 (287)
                      ++.. ++|+|||+|+..                ..++.+++++++  ++++++++||..+|+...       ..++.|++
T Consensus        88 ~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~  167 (383)
T d1gy8a_          88 FTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINA  167 (383)
T ss_dssp             HHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTS
T ss_pred             hhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccccccccc
Confidence            8754 569999999873                345778888877  889999999999987532       23577888


Q ss_pred             CCCCCcch-hhhHHHHHHhh----hCCCcEEEEecCeeecCCCCC----------ChhHHHHHHHH--------------
Q 023110          122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN----------PVEEWFFHRLK--------------  172 (287)
Q Consensus       122 ~~~~~~~~-~~k~~~E~~~~----~~~~~~~ilR~~~v~g~~~~~----------~~~~~~~~~~~--------------  172 (287)
                      +..|.+.| .+|...|.+++    ..+++++++|++++|||+...          .+.+.++..+.              
T Consensus       168 ~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~  247 (383)
T d1gy8a_         168 KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHED  247 (383)
T ss_dssp             CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--------
T ss_pred             CCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhh
Confidence            88888877 99999999884    468999999999999997532          12333333322              


Q ss_pred             --cCCCccCC------CCCCceeeeeeHHHHHHHHHHHHcCC--------ccCCceEEecCCcccCHHHHHHHHHHHhCC
Q 023110          173 --AGRPIPIP------GSGIQVTQLGHVKDLARAFVQVLGNE--------KASRQVFNISGEKYVTFDGLARACAKAAGF  236 (287)
Q Consensus       173 --~~~~~~~~------~~~~~~~~~i~~~D~a~~~~~~~~~~--------~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~  236 (287)
                        .+.++.++      +++.+.++|+|++|+|+++..+++..        ...+++||+++++++|+.|+++.+.+.+|.
T Consensus       248 ~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i~~~~~~  327 (383)
T d1gy8a_         248 ASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGH  327 (383)
T ss_dssp             ---CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCC
T ss_pred             hhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHHHHHhCC
Confidence              22233332      35778899999999999999988632        224579999999999999999999999998


Q ss_pred             CCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          237 PEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +. .+...+..          +........|+ +|++++|||+|+++++|
T Consensus       328 ~~-~~~~~~~~----------~~d~~~~~~d~-~k~~k~LGw~P~~~l~e  365 (383)
T d1gy8a_         328 PI-PVRECGRR----------EGDPAYLVAAS-DKAREVLGWKPKYDTLE  365 (383)
T ss_dssp             CC-CEEEECCC----------TTCCSEECBCC-HHHHHHTCCCCSCCSHH
T ss_pred             CC-ceEECCCC----------CCCcCEeeeCH-HHHHHHHCCccCCCHHH
Confidence            76 43332221          11234556788 99999999999999986

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=3.5e-34  Score=234.14  Aligned_cols=246  Identities=17%  Similarity=0.137  Sum_probs=202.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|.++||+|++++|+.                          +|+.|.+.+.++++..++|+|||++
T Consensus         7 tGasGfiG~~l~~~L~~~g~~Vi~~~r~~--------------------------~D~~d~~~~~~~l~~~~~d~vih~a   60 (281)
T d1vl0a_           7 TGANGQLGREIQKQLKGKNVEVIPTDVQD--------------------------LDITNVLAVNKFFNEKKPNVVINCA   60 (281)
T ss_dssp             ESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------------------CCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEeechh--------------------------ccCCCHHHHHHHHHHcCCCEEEeec
Confidence            79999999999999999999999998752                          3788999999999877899999999


Q ss_pred             CCCcc----------------cHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhhC
Q 023110           81 GREAD----------------EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        81 ~~~~~----------------~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~  142 (287)
                      +....                ....+++.+. ...++++.||..+|+.....+.+|.++..|...| ..|...|.++++.
T Consensus        61 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~  140 (281)
T d1vl0a_          61 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKAL  140 (281)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccchhhcccccccccccccccccccccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHh
Confidence            87421                2333444544 6678999999999998888889999998888877 9999999999999


Q ss_pred             CCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecCCcccC
Q 023110          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       143 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (287)
                      +.+++++||+++|||+.  .+...++..+..+..+.+.+  ++.++++|++|+++++..++++..  .+.||+++++.+|
T Consensus       141 ~~~~~i~R~~~vyG~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~--~g~~~~~~~~~~s  214 (281)
T d1vl0a_         141 NPKYYIVRTAWLYGDGN--NFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKN--YGTFHCTCKGICS  214 (281)
T ss_dssp             CSSEEEEEECSEESSSS--CHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTC--CEEEECCCBSCEE
T ss_pred             CCCccccceeEEeCCCc--ccccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhcc--cCceeEeCCCccc
Confidence            99999999999999963  46677788888887776654  578999999999999999998865  3599999999999


Q ss_pred             HHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          223 FDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       223 ~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      +.|+++.+++.+|++. .+.+++...+.....     ++....+|+ +|++++|||+|+ ++++
T Consensus       215 ~~e~~~~i~~~~g~~~-~i~~i~~~~~~~~a~-----rp~~~~ld~-~k~~~~~g~~~~-~~~~  270 (281)
T d1vl0a_         215 WYDFAVEIFRLTGIDV-KVTPCTTEEFPRPAK-----RPKYSVLRN-YMLELTTGDITR-EWKE  270 (281)
T ss_dssp             HHHHHHHHHHHHCCCC-EEEEECSTTSCCSSC-----CCSBCCBCC-HHHHHTTCCCCC-BHHH
T ss_pred             hHHHHHHHHHHhCCCc-eEEeccHHHcCCcCC-----CccccccCH-HHHHHHhCCCCC-CHHH
Confidence            9999999999999987 777766554322111     223445789 999999999987 6553

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=5.3e-34  Score=238.97  Aligned_cols=268  Identities=17%  Similarity=0.254  Sum_probs=198.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|+++|+++|++|+++++-.... ...+      .......+++++.+|+.|.+.+.++++..++|+|||+
T Consensus         6 TGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~------~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~   79 (338)
T d1orra_           6 TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNL------HWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   79 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHH------HHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHH------HHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEee
Confidence            79999999999999999999999987532221 1110      0011146899999999999999999987778999999


Q ss_pred             CCC----------------CcccHHHHHHhCC--CCccEEEEecceeecc-CCC----------------CCCCCCCCCC
Q 023110           80 NGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLK-SDL----------------LPHCETDTVD  124 (287)
Q Consensus        80 a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~-~~~----------------~~~~e~~~~~  124 (287)
                      |+.                |+.++.++++++.  +++++|+.||..++.. ...                ....+..+..
T Consensus        80 aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (338)
T d1orra_          80 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD  159 (338)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred             cccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccc
Confidence            986                2556889999987  7777666666555433 211                1123334455


Q ss_pred             CCcch-hhhHHHHHHh----hhCCCcEEEEecCeeecCCCC----CChhHHHHHHHHc-----CCCccCCCCCCceeeee
Q 023110          125 PKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY----NPVEEWFFHRLKA-----GRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       125 ~~~~~-~~k~~~E~~~----~~~~~~~~ilR~~~v~g~~~~----~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i  190 (287)
                      |...| .+|...|.++    +..+...+++|++.+|++...    ......++..+..     ++++.+++++.+.++++
T Consensus       160 ~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~  239 (338)
T d1orra_         160 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVL  239 (338)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECE
T ss_pred             cccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeee
Confidence            66655 8888888775    456899999999999976532    2344555555442     66788889999999999


Q ss_pred             eHHHHHHHHHHHHcCCc-cCCceEEecC--CcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCccccccccccccc
Q 023110          191 HVKDLARAFVQVLGNEK-ASRQVFNISG--EKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQS  267 (287)
Q Consensus       191 ~~~D~a~~~~~~~~~~~-~~~~~~~i~~--~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (287)
                      |++|++++++.++++.. ..+++|++..  +..+++.|+++.+.+.++.+. .+...+..          +.....+..|
T Consensus       240 ~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~-~~~~~~~~----------~~~~~~~~~d  308 (338)
T d1orra_         240 HAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM-RFTNLPVR----------ESDQRVFVAD  308 (338)
T ss_dssp             EHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCC-CEEEECCC----------SSCCSEECBC
T ss_pred             cccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCc-eeEeCCCC----------CCCcCeeeEC
Confidence            99999999999998753 3678999854  456899999999999999876 44443321          1123456678


Q ss_pred             chhhhhhcCCCcccccccc
Q 023110          268 MCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       268 ~~~k~~~~lg~~p~~~~~~  286 (287)
                      + +|++++|||+|+++++|
T Consensus       309 ~-~k~~~~Lg~~p~~sl~e  326 (338)
T d1orra_         309 I-KKITNAIDWSPKVSAKD  326 (338)
T ss_dssp             C-HHHHHHHCCCCCSCHHH
T ss_pred             H-HHHHHHHCCCcCCCHHH
Confidence            8 99999999999999986

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.8e-34  Score=237.81  Aligned_cols=248  Identities=19%  Similarity=0.276  Sum_probs=193.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|+.|+++++..                         ..|+.+.+.+.++++..++|.|+|++
T Consensus         8 TG~tGfiG~~l~~~L~~~g~~vi~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~d~v~~~a   62 (315)
T d1e6ua_           8 AGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDSRAVHDFFASERIDQVYLAA   62 (315)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EcCCcHHHHHHHHHHHHCcCEEEEecCch-------------------------hccccCHHHHHHHHhhcCCCEEEEcc
Confidence            79999999999999999999988765431                         14788899999998877899999998


Q ss_pred             CC-----------------CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCC-----CCCcch-hhhHHH
Q 023110           81 GR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-----DPKSRH-KGKLNT  135 (287)
Q Consensus        81 ~~-----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-----~~~~~~-~~k~~~  135 (287)
                      +.                 |+.++.+++++|.  ++++|||+||.++||.....+++|+.+.     .|.+.| .+|..+
T Consensus        63 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  142 (315)
T d1e6ua_          63 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG  142 (315)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred             hhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHH
Confidence            65                 2446788999986  8899999999999998777777776543     233335 999999


Q ss_pred             HHHhh----hCCCcEEEEecCeeecCCCCC-----ChhH-----HHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          136 ESVLE----SKGVNWTSLRPVYIYGPLNYN-----PVEE-----WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       136 E~~~~----~~~~~~~ilR~~~v~g~~~~~-----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      |+++.    +.+++++++||++||||++..     .+..     ........+..+.+.+++.+.++++|++|++.++..
T Consensus       143 E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~  222 (315)
T d1e6ua_         143 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIH  222 (315)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHH
Confidence            99874    568999999999999997532     1211     223444556777888888999999999999999999


Q ss_pred             HHcCCc--------cCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhh
Q 023110          202 VLGNEK--------ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGN  273 (287)
Q Consensus       202 ~~~~~~--------~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~  273 (287)
                      ++.+..        .....++++.+...+..++++.+.+.+|.+. .+...+..          +.......+|+ +|++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~-~i~~~~~~----------~~~~~~~~~d~-sk~k  290 (315)
T d1e6ua_         223 VMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG-RVVFDASK----------PDGTPRKLLDV-TRLH  290 (315)
T ss_dssp             HHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCS-EEEEETTS----------CCCCSBCCBCC-HHHH
T ss_pred             hhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCc-ceEECCCC----------CCCCceeccCH-HHHH
Confidence            986542        2346899999999999999999999999876 54432221          11123455788 9997


Q ss_pred             hcCCCcccccccc
Q 023110          274 LSLTWWKVLQTHT  286 (287)
Q Consensus       274 ~~lg~~p~~~~~~  286 (287)
                       +|||+|++++++
T Consensus       291 -~Lg~~p~~~l~e  302 (315)
T d1e6ua_         291 -QLGWYHEISLEA  302 (315)
T ss_dssp             -HTTCCCCCCHHH
T ss_pred             -HcCCCCCCCHHH
Confidence             599999999876

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=1.4e-32  Score=232.10  Aligned_cols=268  Identities=14%  Similarity=0.166  Sum_probs=196.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++|++|++++|+..+....+.      .....++++++.+|++|++.+.++++...+|+|+|++
T Consensus        14 TG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~------~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~a   87 (356)
T d1rkxa_          14 TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFE------TARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   87 (356)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHH------HTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHh------hhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhh
Confidence            7999999999999999999999999998776322111      0011357999999999999999999877899999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CC-ccEEEEecceeecc-CCCCCCCCCCCCCCCcch-hhhHHHHHHh
Q 023110           81 GRE----------------ADEVEPILDALP--NL-EQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~--~~-~~~i~~Ss~~v~~~-~~~~~~~e~~~~~~~~~~-~~k~~~E~~~  139 (287)
                      +..                +.++.++++++.  +. ..+++.|+..++.. ....+..|+.+..|.++| .+|...|..+
T Consensus        88 a~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~  167 (356)
T d1rkxa_          88 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT  167 (356)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred             ccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhhh
Confidence            863                345788999876  44 45555555544443 334466777777788776 8888888655


Q ss_pred             h-------------hCCCcEEEEecCeeecCCCC--CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          140 E-------------SKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       140 ~-------------~~~~~~~ilR~~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      +             ..++.++++||+++|||++.  ..+.+.+++....+.++ +.+.+.+.++++|++|+|.++..++.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         168 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPV-IIRNPHAIRPWQHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCE-ECSCTTCEECCEETHHHHHHHHHHHH
T ss_pred             hHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCce-EEeeccccccccccccccchhhhhhh
Confidence            2             34688999999999999853  34666677777666554 45788899999999999999998887


Q ss_pred             CCccC----Cce--EEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCC
Q 023110          205 NEKAS----RQV--FNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTW  278 (287)
Q Consensus       205 ~~~~~----~~~--~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  278 (287)
                      +....    +..  +.......+++.++++.+.+.++... .+......         .+.......+|+ +|++++|||
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~---------~~~~~~~~~~d~-skak~~LGw  315 (356)
T d1rkxa_         247 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA-SWQLDGNA---------HPHEAHYLKLDC-SKAKMQLGW  315 (356)
T ss_dssp             HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC-CEEC----------------CCCCCCBCC-HHHHHHHCC
T ss_pred             hhcccccccccccccccccccccccchhhhhhHHHhCCCc-cEEEcCCC---------CCCCcCeeeEcH-HHHHHHHCC
Confidence            64322    223  33334566899999999999999765 33322111         122234556788 999999999


Q ss_pred             cccccccc
Q 023110          279 WKVLQTHT  286 (287)
Q Consensus       279 ~p~~~~~~  286 (287)
                      +|++++++
T Consensus       316 ~P~~~l~e  323 (356)
T d1rkxa_         316 HPRWNLNT  323 (356)
T ss_dssp             CCCCCHHH
T ss_pred             CcCCCHHH
Confidence            99999886

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.97  E-value=4.8e-32  Score=227.46  Aligned_cols=269  Identities=13%  Similarity=0.035  Sum_probs=186.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++||+|++++|+.+... .+...  ............+.+|+.|.+.+..++.  ++|+|+|++
T Consensus        17 TG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~-~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~~~v~~~a   91 (342)
T d1y1pa1          17 TGANGFVASHVVEQLLEHGYKVRGTARSASKLA-NLQKR--WDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGVAHIA   91 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHH--HHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHH-HHHHh--hhccccccccEEEeccccchhhhhhhcc--cchhhhhhc
Confidence            799999999999999999999999999865421 11100  0000012334568899999999999998  999999998


Q ss_pred             CC-------------CcccHHHHHHhCC---CCccEEEEecceeecc-CC---CCC----------------CCCCCCCC
Q 023110           81 GR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLK-SD---LLP----------------HCETDTVD  124 (287)
Q Consensus        81 ~~-------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~-~~---~~~----------------~~e~~~~~  124 (287)
                      +.             ++.++.+++++|.   ++++|||+||..++.. ..   ...                ..|..+..
T Consensus        92 ~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  171 (342)
T d1y1pa1          92 SVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQK  171 (342)
T ss_dssp             CCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTH
T ss_pred             ccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCC
Confidence            87             3456889999874   6899999999765432 11   111                23344445


Q ss_pred             CCcch-hhhHHHHHHh----hh--CCCcEEEEecCeeecCCC----CCChhHHHHHHHHcCCCccCCCCCCceeeeeeHH
Q 023110          125 PKSRH-KGKLNTESVL----ES--KGVNWTSLRPVYIYGPLN----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       125 ~~~~~-~~k~~~E~~~----~~--~~~~~~ilR~~~v~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                      |...| .+|..+|.++    ++  .+++++++||+.+|||..    .......++..+.+++..... .+.+.++++|++
T Consensus       172 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~v~v~  250 (342)
T d1y1pa1         172 SLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL-ALMPPQYYVSAV  250 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH-HTCCSEEEEEHH
T ss_pred             CcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc-CCccceeeeeHH
Confidence            55555 9999999865    33  357889999999999852    234566677788887755442 345678999999


Q ss_pred             HHHHHHHHHHcCCccCCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhh
Q 023110          194 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGN  273 (287)
Q Consensus       194 D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~  273 (287)
                      |+|++++.+++++...+ .|++++++.+|+.|+++.+.+.++..... ..++...     .   .........+  .+..
T Consensus       251 Dva~~~i~~l~~~~~~g-~~~~~~~~~~t~~eia~~i~k~~p~~~~~-~~~~~~~-----~---~~~~~~~~~s--~~~~  318 (342)
T d1y1pa1         251 DIGLLHLGCLVLPQIER-RRVYGTAGTFDWNTVLATFRKLYPSKTFP-ADFPDQG-----Q---DLSKFDTAPS--LEIL  318 (342)
T ss_dssp             HHHHHHHHHHHCTTCCS-CEEEECCEEECHHHHHHHHHHHCTTSCCC-CCCCCCC-----C---CCCEECCHHH--HHHH
T ss_pred             HHHHHHHHhhcCccccc-eEEEEcCCceEHHHHHHHHHHHcCCCcCC-ccCCccC-----c---ccccccchHH--HHHH
Confidence            99999999998877545 56688889999999999999988432211 1111110     0   0011112223  3555


Q ss_pred             hcCCCccccccccC
Q 023110          274 LSLTWWKVLQTHTT  287 (287)
Q Consensus       274 ~~lg~~p~~~~~~~  287 (287)
                      +.|||.|.+|+|+|
T Consensus       319 k~lg~~~~~~lee~  332 (342)
T d1y1pa1         319 KSLGRPGWRSIEES  332 (342)
T ss_dssp             HHTTCCSCCCHHHH
T ss_pred             HHcCCCCCcCHHHH
Confidence            57999999999874

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=2.2e-29  Score=207.65  Aligned_cols=261  Identities=16%  Similarity=0.122  Sum_probs=165.1

Q ss_pred             CCcccchHHHHHHHHHHcCC-eEEEEEcCCccc-cccCCCCChhhhhhhcCCeEEEEecCCChHH-HHhhhh---cCCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLS---AKGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~-~~~~~~---~~~~d   74 (287)
                      ||||||||++|+++|+++|+ +|+++++-.... ...+.          ...    ..|..+.+. ....+.   -..++
T Consensus         5 TGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV----------DLN----IADYMDKEDFLIQIMAGEEFGDVE   70 (307)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH----------TSC----CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             ecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc----------ccc----hhhhccchHHHHHHhhhhcccchh
Confidence            79999999999999999995 788886433221 10000          011    112222222 222221   12788


Q ss_pred             EEEecCCCC--------------cccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHH
Q 023110           75 VVYDINGRE--------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (287)
Q Consensus        75 ~vi~~a~~~--------------~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~  138 (287)
                      +|+|+|+..              ...+.++++++. ...++++.||..++.........++.+..|.+.| .+|..+|.+
T Consensus        71 ~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~  150 (307)
T d1eq2a_          71 AIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEY  150 (307)
T ss_dssp             EEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred             hhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhh
Confidence            999998753              334667777776 4446788888888876665556666666777666 999999987


Q ss_pred             hh----hCCCcEEEEecCeeecCCCC-----CChhHHHHHHHHcCCCcc-CCCCCCceeeeeeHHHHHHHHHHHHcCCcc
Q 023110          139 LE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       139 ~~----~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (287)
                      ++    +.+++++++|++++|||+..     ..+...++..+..++... ..+++...++++|++|++.++..++.++. 
T Consensus       151 ~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~-  229 (307)
T d1eq2a_         151 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-  229 (307)
T ss_dssp             HHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-
T ss_pred             ccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc-
Confidence            74    56899999999999999742     234555667777776543 34677889999999999999999998764 


Q ss_pred             CCceEEecCCcccCHHHHHHHHHHHhCCCCCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          209 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       209 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                       .+.||+++++..|+.|+++++.+..+.......+.+....        .........|+ +|+++++||+|+++++|
T Consensus       230 -~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~--------~~~~~~~~~d~-~k~~~~~~~~p~~sl~e  297 (307)
T d1eq2a_         230 -SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLK--------GRYQAFTQADL-TNLRAAGYDKPFKTVAE  297 (307)
T ss_dssp             -CEEEEESCSCCBCHHHHHHHC-----------------------------CCCSCCBCC-HHHHHTTCCCCCCCHHH
T ss_pred             -ccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCC--------CCCceeeecCH-HHHHHHHCCCCCCCHHH
Confidence             4699999999999999999998877643222222221110        01122334577 99999999999999886

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.96  E-value=2.8e-29  Score=206.29  Aligned_cols=253  Identities=17%  Similarity=0.133  Sum_probs=188.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|.++|+ +++++++...                      +.+|+.|.+.+.++++..++|+|||+|
T Consensus         6 tG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~----------------------~~~Dl~~~~~~~~~i~~~~~D~Vih~A   62 (298)
T d1n2sa_           6 FGKTGQVGWELQRSLAPVGN-LIALDVHSKE----------------------FCGDFSNPKGVAETVRKLRPDVIVNAA   62 (298)
T ss_dssp             ECTTSHHHHHHHHHTTTTSE-EEEECTTCSS----------------------SCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCC-EEEEECCCcc----------------------ccCcCCCHHHHHHHHHHcCCCEEEEec
Confidence            79999999999999999886 4455554332                      247899999999999877899999999


Q ss_pred             CCC----------------cccHHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhhC
Q 023110           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        81 ~~~----------------~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~~  142 (287)
                      |..                ...+.+++++++ ...+++++||..+|+.....|.+|+.+..|.+.| .+|..+|.++...
T Consensus        63 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~  142 (298)
T d1n2sa_          63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDN  142 (298)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhh
Confidence            863                334778889987 5678999999999988888899999999998877 9999999999877


Q ss_pred             CCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcC---CccCCceEEecCCc
Q 023110          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN---EKASRQVFNISGEK  219 (287)
Q Consensus       143 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~---~~~~~~~~~i~~~~  219 (287)
                      ..+..++|++..++... ......+...+..+..+...  +.+..+++|+.|+++++..++..   ....+++||+++++
T Consensus       143 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~  219 (298)
T d1n2sa_         143 CPKHLIFRTSWVYAGKG-NNFAKTMLRLAKERQTLSVI--NDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGG  219 (298)
T ss_dssp             CSSEEEEEECSEECSSS-CCHHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBS
T ss_pred             hcccccccccceeeccC-Cccchhhhhhhcccceeecc--cceeecccccchHHHHHHHHHhhhhccccccccccccCCC
Confidence            77777888777765432 22344455666666665543  35678999999999998888753   33356899999999


Q ss_pred             ccCHHHHHHHHHHHhCCC-----CCeEEeCCccccccCCCcccccccccccccchhhhhhcCCCcccccccc
Q 023110          220 YVTFDGLARACAKAAGFP-----EPELVHYNPKEFDFGKKKAFPFRDQLRRQSMCSDGNLSLTWWKVLQTHT  286 (287)
Q Consensus       220 ~~s~~e~~~~i~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~  286 (287)
                      .++..++++.+.+..+..     .+.+.+.+...+...     ..++....+|+ +|+++.|||+|+ ++++
T Consensus       220 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~-----a~RP~~~~ld~-~K~~~~~~~~~~-~~~~  284 (298)
T d1n2sa_         220 TTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTP-----ASRPGNSRLNT-EKFQRNFDLILP-QWEL  284 (298)
T ss_dssp             CEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCS-----SCCCSBCCBCC-HHHHHHHTCCCC-BHHH
T ss_pred             ceecHHHHHHHHhhhhccCccccccceeeeehhhcCcc-----CCCccccccCH-HHHHHHHCCCCC-cHHH
Confidence            999999999888765432     212333333322111     11233446899 999999999996 6653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.5e-27  Score=184.17  Aligned_cols=184  Identities=16%  Similarity=0.215  Sum_probs=146.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||++|++++++|+++||+|++++|++++.....           ..+++++.+|+.|.+++.++++  ++|+|||++
T Consensus         9 ~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-----------~~~~~~~~gD~~d~~~l~~al~--~~d~vi~~~   75 (205)
T d1hdoa_           9 FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-----------PRPAHVVVGDVLQAADVDKTVA--GQDAVIVLL   75 (205)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-----------CCCSEEEESCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-----------ccccccccccccchhhHHHHhc--CCCEEEEEe
Confidence            699999999999999999999999999987743222           3679999999999999999999  999999998


Q ss_pred             CCC---------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCCCcEEEE
Q 023110           81 GRE---------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL  149 (287)
Q Consensus        81 ~~~---------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~il  149 (287)
                      |..         ..++.+++++++  +++|||++||..+++.....      +.....++..|..+|+++++.+++|+++
T Consensus        76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~------~~~~~~~~~~~~~~e~~l~~~~~~~tii  149 (205)
T d1hdoa_          76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV------PPRLQAVTDDHIRMHKVLRESGLKYVAV  149 (205)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS------CGGGHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred             ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccc------cccccccchHHHHHHHHHHhcCCceEEE
Confidence            763         235778999987  99999999999887543321      1111123478888999999999999999


Q ss_pred             ecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecC
Q 023110          150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  217 (287)
Q Consensus       150 R~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~  217 (287)
                      ||+.+++.....              ...+..++.....+|+.+|+|++++.+++++...|+.+.++.
T Consensus       150 rp~~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~  203 (205)
T d1hdoa_         150 MPPHIGDQPLTG--------------AYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (205)
T ss_dssp             CCSEEECCCCCS--------------CCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             ecceecCCCCcc--------------cEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence            999998653211              112223455667899999999999999998887788777764

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.95  E-value=6.4e-28  Score=199.29  Aligned_cols=235  Identities=12%  Similarity=0.092  Sum_probs=175.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||+|++|+++|+++||+|++++|+.........   .........+++++.+|+.|.+.+.+.++  +++++++++
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~---~~~~~~~~~~v~~v~~d~~d~~~~~~~~~--~~~~~~~~~   83 (312)
T d1qyda_           9 VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKV---QMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVISAL   83 (312)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHH---HHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHH---HHHhhhccCCcEEEEeecccchhhhhhcc--Ccchhhhhh
Confidence            7999999999999999999999999998654211000   00001113679999999999999999998  899999987


Q ss_pred             CC-----CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc-hhhhHHHHHHhhhCCCcEEEEecC
Q 023110           81 GR-----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR-HKGKLNTESVLESKGVNWTSLRPV  152 (287)
Q Consensus        81 ~~-----~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~-~~~k~~~E~~~~~~~~~~~ilR~~  152 (287)
                      +.     +.....++++++.  +..++++.||.+++....      ..+..|... +..+..++++.++.+++++++|++
T Consensus        84 ~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~  157 (312)
T d1qyda_          84 AGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIM------EHALQPGSITFIDKRKVRRAIEAASIPYTYVSSN  157 (312)
T ss_dssp             CCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSC------CCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECC
T ss_pred             hhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCc------ccccchhhhhhHHHHHHHHhhcccccceEEeccc
Confidence            65     3456777887766  678888888876654322      223333333 488888888889999999999999


Q ss_pred             eeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCce-EEecCCcccCHHHHHHHHH
Q 023110          153 YIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARACA  231 (287)
Q Consensus       153 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~-~~i~~~~~~s~~e~~~~i~  231 (287)
                      .+||+.... +...+......++.+.+++++++.++++|++|+|++++.++.++...++. |++++++.+|+.|+++.++
T Consensus       158 ~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~  236 (312)
T d1qyda_         158 MFAGYFAGS-LAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWE  236 (312)
T ss_dssp             EEHHHHTTT-SSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHH
T ss_pred             eeecCCccc-hhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHH
Confidence            999964221 11111112234556777789999999999999999999999887766654 5666677899999999999


Q ss_pred             HHhCCCCCeEEeCCccc
Q 023110          232 KAAGFPEPELVHYNPKE  248 (287)
Q Consensus       232 ~~~g~~~~~~~~~~~~~  248 (287)
                      +.+|.+. .+.+++...
T Consensus       237 ~~~g~~~-~~~~i~~~~  252 (312)
T d1qyda_         237 RLSEQNL-DKIYISSQD  252 (312)
T ss_dssp             HHHTCCC-EECCBCSHH
T ss_pred             HHHCCCC-eEEECCHHH
Confidence            9999887 666666543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.94  E-value=1.2e-27  Score=196.80  Aligned_cols=234  Identities=15%  Similarity=0.151  Sum_probs=173.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||+|++++++|+++||+|++++|+.........  ..........+++++.+|+.+...+...++  +++.|+|++
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~vi~~~   84 (307)
T d1qyca_           9 IGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEK--AQLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVISTV   84 (307)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHH--HHHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhH--HHHHHhhccCCcEEEEeecccchhhhhhhh--hceeeeecc
Confidence            7999999999999999999999999998665211100  000001113578999999999999999998  899999998


Q ss_pred             CCC-cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc-hhhhHHHHHHhhhCCCcEEEEecCeeec
Q 023110           81 GRE-ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR-HKGKLNTESVLESKGVNWTSLRPVYIYG  156 (287)
Q Consensus        81 ~~~-~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~-~~~k~~~E~~~~~~~~~~~ilR~~~v~g  156 (287)
                      +.. .....++++++.  +.+++++.|+.....       ++.....+... +..+...+.++++.+++++++|++.+||
T Consensus        85 ~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~g  157 (307)
T d1qyca_          85 GSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDV-------DNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAG  157 (307)
T ss_dssp             CGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCT-------TSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEHH
T ss_pred             cccccchhhHHHHHHHHhccccceeeecccccc-------ccccccccccccccccccccchhhccCCCceecccceecC
Confidence            653 556678888866  788898888755432       12222222223 3667778888888999999999999999


Q ss_pred             CCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCc-eEEecCCcccCHHHHHHHHHHHhC
Q 023110          157 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ-VFNISGEKYVTFDGLARACAKAAG  235 (287)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~-~~~i~~~~~~s~~e~~~~i~~~~g  235 (287)
                      ++...  +..++.....+....+++++++.++++|++|+|++++.+++++...++ .|++++++.+|+.|+++.+.+.+|
T Consensus       158 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G  235 (307)
T d1qyca_         158 YFLRS--LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID  235 (307)
T ss_dssp             HHTTT--TTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTT
T ss_pred             CCccc--hhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHC
Confidence            75321  112222334455566678889999999999999999999988776555 456677888999999999999999


Q ss_pred             CCCCeEEeCCccc
Q 023110          236 FPEPELVHYNPKE  248 (287)
Q Consensus       236 ~~~~~~~~~~~~~  248 (287)
                      .+. ++..++..+
T Consensus       236 ~~~-~~~~~~~~~  247 (307)
T d1qyca_         236 KTL-EKAYVPEEE  247 (307)
T ss_dssp             SCC-EEEEECHHH
T ss_pred             CCC-cEEECCHHH
Confidence            876 666666543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.2e-25  Score=177.92  Aligned_cols=186  Identities=18%  Similarity=0.188  Sum_probs=142.0

Q ss_pred             CCcccchHHHHHHHHHHcCC--eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||+|++|+++|+++|+  +|++++|++.......           ...++.+.+|+.+.+.+.++++  ++|+|||
T Consensus        20 tGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-----------~~~i~~~~~D~~~~~~~~~~~~--~~d~vi~   86 (232)
T d2bkaa1          20 LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----------YKNVNQEVVDFEKLDDYASAFQ--GHDVGFC   86 (232)
T ss_dssp             ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----------GGGCEEEECCGGGGGGGGGGGS--SCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-----------cceeeeeeeccccccccccccc--ccccccc
Confidence            79999999999999999984  8999999875522111           3578888899999999999998  9999999


Q ss_pred             cCCCC-------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCC
Q 023110           79 INGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKG  143 (287)
Q Consensus        79 ~a~~~-------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~  143 (287)
                      +++..             ...+.+++++|.  ++++|||+||..+++...            ..|..+|..+|+.+++.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~------------~~Y~~~K~~~E~~l~~~~  154 (232)
T d2bkaa1          87 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSN------------FLYLQVKGEVEAKVEELK  154 (232)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS------------SHHHHHHHHHHHHHHTTC
T ss_pred             cccccccccchhhhhhhcccccceeeecccccCccccccCCccccccCcc------------chhHHHHHHhhhcccccc
Confidence            99874             334677888876  889999999988753221            224499999999999888


Q ss_pred             Cc-EEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCccCCceEEecC
Q 023110          144 VN-WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  217 (287)
Q Consensus       144 ~~-~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~  217 (287)
                      ++ ++|+||+.+||++.......++........     .........|+++|+|++++..+.++.. ++.+.+.+
T Consensus       155 ~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~~~  223 (232)
T d2bkaa1         155 FDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSL-----PDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN  223 (232)
T ss_dssp             CSEEEEEECCEEECTTGGGSHHHHHHHHHHCSC-----CTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred             ccceEEecCceeecCCCcCcHHHHHHHHHhhcc-----CCcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEEcH
Confidence            75 899999999999754444444444444321     2333445679999999999999877763 45666654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.89  E-value=7.8e-24  Score=168.54  Aligned_cols=206  Identities=15%  Similarity=0.133  Sum_probs=144.1

Q ss_pred             CCcccchHHHHHHHHHHcCCe--EEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++++++|+++|++  |++++|+++.. ..+           ..+++++.+|+.+.+.+.++++  ++|+|||
T Consensus         9 tGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~-~~~-----------~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~   74 (252)
T d2q46a1           9 TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-EKI-----------GGEADVFIGDITDADSINPAFQ--GIDALVI   74 (252)
T ss_dssp             ESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHH-HHT-----------TCCTTEEECCTTSHHHHHHHHT--TCSEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHH-Hhc-----------cCCcEEEEeeeccccccccccc--cceeeEE
Confidence            799999999999999999975  66677776552 222           3578899999999999999998  9999999


Q ss_pred             cCCCC-----------------------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           79 INGRE-----------------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        79 ~a~~~-----------------------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      +++..                             ..++.+++..+.  ...++.+.|+...+.....     ........
T Consensus        75 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~-----~~~~~~~~  149 (252)
T d2q46a1          75 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP-----LNKLGNGN  149 (252)
T ss_dssp             CCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG-----GGGGGGCC
T ss_pred             EEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc-----cccccccc
Confidence            98752                             234667777665  6778888887665432111     00011111


Q ss_pred             chhhhHHHHHHhhhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCc
Q 023110          128 RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       128 ~~~~k~~~E~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (287)
                      +...+...+.+....+++++++||+++|||.....-      .+ .+.....   .....+++|++|+|++++.+++++.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~------~~-~~~~~~~---~~~~~~~i~~~Dva~a~~~~l~~~~  219 (252)
T d2q46a1         150 ILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE------LL-VGKDDEL---LQTDTKTVPRADVAEVCIQALLFEE  219 (252)
T ss_dssp             HHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSC------EE-EESTTGG---GGSSCCEEEHHHHHHHHHHHTTCGG
T ss_pred             hhhhhhhhhhhhhcccccceeecceEEECCCcchhh------hh-hccCccc---ccCCCCeEEHHHHHHHHHHHhCCcc
Confidence            225566666777788999999999999999642110      00 1111111   1234579999999999999999988


Q ss_pred             cCCceEEecCCc---ccCHHHHHHHHHHHhC
Q 023110          208 ASRQVFNISGEK---YVTFDGLARACAKAAG  235 (287)
Q Consensus       208 ~~~~~~~i~~~~---~~s~~e~~~~i~~~~g  235 (287)
                      ..+++|||+++.   ..++.++.+.+.+..+
T Consensus       220 ~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         220 AKNKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             GTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             ccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            788999998743   3567777777665443

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.89  E-value=6e-23  Score=172.15  Aligned_cols=226  Identities=14%  Similarity=0.076  Sum_probs=163.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccc-cCCCCChhhhhhhcCCeEEEEecCCCh-HHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~D~~d~-~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||+|++|+++|+++||+|++++|++++... .+.         ...+++++++|+.|. +.+..++.  ++|++++
T Consensus         9 tGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~---------~~~~v~~~~gD~~d~~~~~~~a~~--~~~~~~~   77 (350)
T d1xgka_           9 VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ---------AIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFI   77 (350)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH---------TSTTEEEEESCCTTCHHHHHHHHT--TCSEEEE
T ss_pred             ECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhc---------ccCCCEEEEeeCCCcHHHHHHHhc--CCceEEe
Confidence            7999999999999999999999999998776321 111         135899999999885 45677887  8888887


Q ss_pred             cCCC----CcccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhhhCCCcEEEEecC
Q 023110           79 INGR----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPV  152 (287)
Q Consensus        79 ~a~~----~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~~~~~~~~ilR~~  152 (287)
                      ....    +...+.++++++.  +++++++.||........        ......+..+|...|.++.+.+++++++|++
T Consensus        78 ~~~~~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~--------~~~~~~~~~~k~~~~~~~~~~~~~~~~vr~~  149 (350)
T d1xgka_          78 NTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG--------PWPAVPMWAPKFTVENYVRQLGLPSTFVYAG  149 (350)
T ss_dssp             CCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTS--------SCCCCTTTHHHHHHHHHHHTSSSCEEEEEEC
T ss_pred             ecccccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCC--------cccchhhhhhHHHHHHHHHhhccCceeeeec
Confidence            6543    3456788999987  888999999866433211        1122234588999999999999999999999


Q ss_pred             eeecCCCC--CChhHHHHHHHHcCC-CccCCCCCCceeeeeeH-HHHHHHHHHHHcCCc--cCCceEEecCCcccCHHHH
Q 023110          153 YIYGPLNY--NPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHV-KDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGL  226 (287)
Q Consensus       153 ~v~g~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~-~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s~~e~  226 (287)
                      .+++....  .....  ......+. ....+.+++..+++++. +|+++++..++..+.  ..|+.|++++ +.+|+.|+
T Consensus       150 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g-~~~T~~ei  226 (350)
T d1xgka_         150 IYNNNFTSLPYPLFQ--MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQV  226 (350)
T ss_dssp             EEGGGCBSSSCSSCB--EEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHH
T ss_pred             eeecccccccccccc--ccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC-CcCCHHHH
Confidence            98875311  11100  00111221 23334566777888886 799999999986542  3678999987 56999999


Q ss_pred             HHHHHHHhCCCCCeEEeCCcccc
Q 023110          227 ARACAKAAGFPEPELVHYNPKEF  249 (287)
Q Consensus       227 ~~~i~~~~g~~~~~~~~~~~~~~  249 (287)
                      ++.+++.+|++. .+.++|...+
T Consensus       227 a~~l~~~~G~~v-~~~~vp~~~~  248 (350)
T d1xgka_         227 CAAFSRALNRRV-TYVQVPKVEI  248 (350)
T ss_dssp             HHHHHHHHTSCE-EEEECSSCCC
T ss_pred             HHHHHHHHCCcc-eEEECCHHHH
Confidence            999999999986 7777776543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=7.5e-22  Score=153.75  Aligned_cols=167  Identities=20%  Similarity=0.167  Sum_probs=115.8

Q ss_pred             CCcccchHHHHHHHHHHcCC--eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||+|++|+++|+++|+  +|++++|++...               ...+   ..+..|..++...+. ..+|+|||
T Consensus         8 tGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~---------------~~~~---~~~~~d~~~~~~~~~-~~~d~vi~   68 (212)
T d2a35a1           8 AGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------------HPRL---DNPVGPLAELLPQLD-GSIDTAFC   68 (212)
T ss_dssp             ECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------------CTTE---ECCBSCHHHHGGGCC-SCCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh---------------cccc---cccccchhhhhhccc-cchheeee
Confidence            79999999999999999997  677777765331               1222   233444444444433 26899999


Q ss_pred             cCCCC--------------cccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhhh
Q 023110           79 INGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        79 ~a~~~--------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~~  141 (287)
                      ++|..              ...+.+++++++  ++++|+++||.++++.             +.++| .+|..+|+.+++
T Consensus        69 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~-------------~~~~y~~~K~~~E~~l~~  135 (212)
T d2a35a1          69 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVKGELEQALQE  135 (212)
T ss_dssp             CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHTT
T ss_pred             eeeeeccccccccccccchhhhhhhcccccccccccccccccccccccc-------------cccchhHHHHHHhhhccc
Confidence            98774              234677888887  8899999999887532             22344 899999999988


Q ss_pred             CCC-cEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCc
Q 023110          142 KGV-NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       142 ~~~-~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (287)
                      .++ +++|+||+.|||+.........    +  ...+.....  ..+.+||++|+|++++.+++++.
T Consensus       136 ~~~~~~~I~Rp~~v~G~~~~~~~~~~----~--~~~~~~~~~--~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         136 QGWPQLTIARPSLLFGPREEFRLAEI----L--AAPIARILP--GKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             SCCSEEEEEECCSEESTTSCEEGGGG----T--TCCCC------CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             cccccceeeCCcceeCCcccccHHHH----H--HHHHhhccC--CCCcEEEHHHHHHHHHHHHcCCC
Confidence            887 5999999999999753222111    1  112111111  23567999999999999998765

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.61  E-value=1e-14  Score=114.71  Aligned_cols=189  Identities=18%  Similarity=0.189  Sum_probs=130.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|.++|++|++.+|+.....+..+          ..+++.+.+|+.|++++++++++.     ++|+
T Consensus        11 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_          11 TGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE----------AVGAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----------TTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----------HcCCeEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            7999999999999999999999999998765322211          236788999999999988887643     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....                    +    ++.++..+.  +...++++||....+.           +....|.
T Consensus        81 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~-----------~~~~~Y~  149 (242)
T d1ulsa_          81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN-----------LGQANYA  149 (242)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC-----------TTCHHHH
T ss_pred             EEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCC-----------CCCcchH
Confidence            9999997421                    1    333444444  4556777776543211           1112244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+.+       ..|+++..|.||.+-.+.... .............++..         +...+|+|.++..+
T Consensus       150 asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~-~~~~~~~~~~~~~pl~R---------~~~pedia~~v~fL  219 (242)
T d1ulsa_         150 ASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAIAATPLGR---------AGKPLEVAYAALFL  219 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHHHTCTTCS---------CBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhc-CCHHHHHHHHhcCCCCC---------CCCHHHHHHHHHHH
Confidence            89998887653       468999999999997764322 22334444444443322         34589999999999


Q ss_pred             HcCC--ccCCceEEecCCcc
Q 023110          203 LGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~~  220 (287)
                      +...  --.|+.+.+.++..
T Consensus       220 ~S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         220 LSDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             HSGGGTTCCSCEEEESTTTT
T ss_pred             hchhhCCCCCcEEEECCCcc
Confidence            8543  23788999988754

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.60  E-value=7.3e-15  Score=115.15  Aligned_cols=183  Identities=19%  Similarity=0.266  Sum_probs=125.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++.||+++++.|+++|++|++.+|+...                ..++..+++|+.|+++++++++..     ++|+
T Consensus        13 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   76 (237)
T d1uzma1          13 TGGNRGIGLAIAQRLAADGHKVAVTHRGSGA----------------PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   76 (237)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSSCC----------------CTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCcch----------------hcCceEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            8999999999999999999999999998765                356778999999999888777642     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....                    +    ++.++..+.  +..++|++||........          ....|.
T Consensus        77 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~----------~~~~Y~  146 (237)
T d1uzma1          77 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG----------NQANYA  146 (237)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------------CCHHHH
T ss_pred             EEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCc----------ccHHHH
Confidence            9999987421                    1    223344443  556999999976532111          112234


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+.+       ..|+++..|.||.+..+... .+.........+..++.         -+...+|+|.+++.+
T Consensus       147 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~-~~~~~~~~~~~~~~pl~---------R~~~pedvA~~v~fL  216 (237)
T d1uzma1         147 ASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR-ALDERIQQGALQFIPAK---------RVGTPAEVAGVVSFL  216 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-HSCHHHHHHHGGGCTTC---------SCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhh-ccCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHH
Confidence            99998887653       46899999999998665210 01112222222222221         245689999999998


Q ss_pred             HcCC--ccCCceEEecCCc
Q 023110          203 LGNE--KASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~  219 (287)
                      +...  --.|+.+.+.++-
T Consensus       217 ~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         217 ASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             HSGGGTTCCSCEEEESTTT
T ss_pred             hCchhcCCcCCeEEECCCC
Confidence            8543  2378899988873

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=5.7e-15  Score=117.10  Aligned_cols=196  Identities=14%  Similarity=0.154  Sum_probs=131.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||++++++|.++|++|++.+|+.+...+..     .++.....++.++++|+++++++.++++..     ++|+
T Consensus        17 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDi   91 (255)
T d1fmca_          17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHVV-----DEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI   91 (255)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999876532211     122222457889999999998888777642     7999


Q ss_pred             EEecCCCCcc-------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchh
Q 023110           76 VYDINGREAD-------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (287)
Q Consensus        76 vi~~a~~~~~-------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  130 (287)
                      +||+||....                   +    ++.++..+.  +..++|++||...+...          +....|..
T Consensus        92 lvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~----------~~~~~Y~a  161 (255)
T d1fmca_          92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN----------INMTSYAS  161 (255)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC----------TTCHHHHH
T ss_pred             eeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc----------cccccchh
Confidence            9999987421                   1    222333333  55688999987653211          11122348


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      +|...+.+.+       .+|+++..|.||.+-.+.....+.+.......+..++.         -+...+|+|.+++.++
T Consensus       162 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~---------R~g~pedvA~~v~fL~  232 (255)
T d1fmca_         162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR---------RLGQPQDIANAALFLC  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSC---------SCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHh
Confidence            9998876653       46899999999998765311112223334444433332         1345899999999998


Q ss_pred             cCC--ccCCceEEecCCcc
Q 023110          204 GNE--KASRQVFNISGEKY  220 (287)
Q Consensus       204 ~~~--~~~~~~~~i~~~~~  220 (287)
                      ...  --.|+.+.+.++..
T Consensus       233 S~~s~~itG~~i~vDGG~~  251 (255)
T d1fmca_         233 SPAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             SGGGTTCCSCEEEESTTSC
T ss_pred             CchhcCCcCCEEEECcCcc
Confidence            543  23788999998863

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.58  E-value=9.9e-15  Score=115.49  Aligned_cols=194  Identities=16%  Similarity=0.232  Sum_probs=131.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|.++|++|++.+|+.....+..     ..+.....++..+++|++|++++.++++..     ++|+
T Consensus        16 TGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~-----~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   90 (251)
T d2c07a1          16 TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV-----DEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI   90 (251)
T ss_dssp             ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcee
Confidence            799999999999999999999999999876532211     112222357889999999999888887643     8999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+++....                    +    ++.++..+.  +..++|++||...+....          ....|.
T Consensus        91 lvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~----------~~~~Y~  160 (251)
T d2c07a1          91 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV----------GQANYS  160 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------TCHHHH
T ss_pred             eeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCC----------CCHHHH
Confidence            9999987311                    1    233444443  567999999976542211          111244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|..++.+.+       ..|+++..|.||.+-.+.... ..........+..++.         -+...+|+|.+++.+
T Consensus       161 asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~-~~~~~~~~~~~~~pl~---------R~~~pedvA~~v~fL  230 (251)
T d2c07a1         161 SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNIPAG---------RMGTPEEVANLACFL  230 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTTS---------SCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccc-cCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHH
Confidence            89998887653       468999999999997764221 2233444444443332         145689999999998


Q ss_pred             HcCCc--cCCceEEecCCc
Q 023110          203 LGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~  219 (287)
                      +....  -.|+.+.+.++-
T Consensus       231 ~S~~s~~itG~~i~vDGG~  249 (251)
T d2c07a1         231 SSDKSGYINGRVFVIDGGL  249 (251)
T ss_dssp             HSGGGTTCCSCEEEESTTS
T ss_pred             hCchhCCCcCcEEEECCCc
Confidence            85432  378889888873

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.57  E-value=1.5e-14  Score=113.85  Aligned_cols=191  Identities=16%  Similarity=0.167  Sum_probs=130.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|.++|++|++.+|+.+...+.        ..+...+...+.+|++|+++++++++..     ++|+
T Consensus        10 TGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_          10 TGASRGIGRAIAETLAARGAKVIGTATSENGAQAI--------SDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH--------HHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH--------HHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            89999999999999999999999999987653211        1122457788999999998888777642     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+|+....                    +    ++.++..+.  +..++|++||...+....          ....|.
T Consensus        82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~----------~~~~Y~  151 (243)
T d1q7ba_          82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG----------GQANYA  151 (243)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------TCHHHH
T ss_pred             ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCC----------CCHHHH
Confidence            9999987421                    1    333444443  557899999977542211          112244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|..++.+.+       .+|+++..|.||.+-.+.... +.......+.+..++.         -+...+|+|.++..+
T Consensus       152 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~-~~~~~~~~~~~~~pl~---------R~~~pedvA~~v~fL  221 (243)
T d1q7ba_         152 AAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA-LSDDQRAGILAQVPAG---------RLGGAQEIANAVAFL  221 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHTTCTTS---------SCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhh-hhhhHHHHHHhcCCCC---------CCCCHHHHHHHHHHH
Confidence            99998887653       468999999999886542111 1122223333332221         245689999999999


Q ss_pred             HcCCc--cCCceEEecCCc
Q 023110          203 LGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~  219 (287)
                      +....  -.|+.+.+.++-
T Consensus       222 ~S~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         222 ASDEAAYITGETLHVNGGM  240 (243)
T ss_dssp             HSGGGTTCCSCEEEESTTS
T ss_pred             hCchhcCCcCCeEEECCCe
Confidence            86432  378899998874

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.57  E-value=1.5e-14  Score=113.90  Aligned_cols=195  Identities=17%  Similarity=0.197  Sum_probs=130.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+++.....+.+.    ..+.....++.++++|+.|+++++++++..     ++|+
T Consensus         7 TGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVS----KQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            8999999999999999999999987765443222221    122223457889999999999888877642     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+|+....                    +    ++.++..+.  +..++|++||...+-...          ....|.
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~----------~~~~Y~  152 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI----------GQANYA  152 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------TCHHHH
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCC----------CCHHHH
Confidence            9999987421                    1    333445443  567999999977542211          112244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+.+       ..|+++..|.||.+-.+... .+.........+..++.         -+...+|+|+++..+
T Consensus       153 asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~-~~~~~~~~~~~~~~pl~---------R~~~p~dvA~~v~fL  222 (244)
T d1edoa_         153 AAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA-KLGEDMEKKILGTIPLG---------RTGQPENVAGLVEFL  222 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH-TTCHHHHHHHHTSCTTC---------SCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHH-HhhHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHH
Confidence            89998887653       46899999999988654211 11222333443333321         245589999999988


Q ss_pred             HcCCc---cCCceEEecCCc
Q 023110          203 LGNEK---ASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~~---~~~~~~~i~~~~  219 (287)
                      +..+.   -.|+.+.+.++-
T Consensus       223 a~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         223 ALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHCSGGGGCCSCEEEESTTT
T ss_pred             HCCchhcCCcCCeEEeCCCe
Confidence            64332   378889888874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.5e-14  Score=113.93  Aligned_cols=191  Identities=12%  Similarity=0.116  Sum_probs=130.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||++.||+++++.|.++|++|++.+|+.....+.         .+...++..+.+|+.|.+++++++++. ++|++||+
T Consensus        13 TGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~---------~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn   83 (244)
T d1pr9a_          13 TGAGKGIGRGTVQALHATGARVVAVSRTQADLDSL---------VRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHH---------HHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence            79999999999999999999999999987653211         111357889999999999999998865 79999999


Q ss_pred             CCCCcc--------------------c----HHHHHHhC-C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhh
Q 023110           80 NGREAD--------------------E----VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (287)
Q Consensus        80 a~~~~~--------------------~----~~~ll~~~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k  132 (287)
                      |+....                    +    ++.++..+ +  +..++|++||.......          +....|..+|
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~----------~~~~~Y~asK  153 (244)
T d1pr9a_          84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV----------TNHSVYCSTK  153 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----------TTBHHHHHHH
T ss_pred             cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc----------cchhhhhhhH
Confidence            987421                    1    23344432 2  45689999997653211          1112233889


Q ss_pred             HHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      ...+.+.+       ..++++..|.||.+..+.... ...........+..++.         -+...+|+|.+++.++.
T Consensus       154 aal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~peevA~~v~fL~S  224 (244)
T d1pr9a_         154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLG---------KFAEVEHVVNAILFLLS  224 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTC---------SCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhC
Confidence            88877653       468999999999987653110 01112233333332221         24568999999999885


Q ss_pred             CC--ccCCceEEecCCc
Q 023110          205 NE--KASRQVFNISGEK  219 (287)
Q Consensus       205 ~~--~~~~~~~~i~~~~  219 (287)
                      ..  --.|+.+.+.++.
T Consensus       225 ~~a~~itG~~i~vDGG~  241 (244)
T d1pr9a_         225 DRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             GGGTTCCSCEEEESTTG
T ss_pred             chhCCcCCcEEEECccH
Confidence            43  2378899988874

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.56  E-value=2.8e-14  Score=112.76  Aligned_cols=197  Identities=17%  Similarity=0.186  Sum_probs=131.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++.||+++++.|+++|++|++.+|+.+...+...    ........++..+.+|+.|+++++++++..     ++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~----~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   86 (251)
T d1vl8a_          11 TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQ----KLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDT   86 (251)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765322211    111222457888999999999888887642     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....                    +    ++.++..++  +..++|++||......         ..+....|.
T Consensus        87 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~---------~~~~~~~Y~  157 (251)
T d1vl8a_          87 VVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV---------TMPNISAYA  157 (251)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC---------CSSSCHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccc---------cCccccchH
Confidence            9999997421                    1    344555554  5569999988543110         001111234


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      .+|..++.+.+       ..|+++..|.||.+-.+...... .+.......+..++..         +...+|+|++++.
T Consensus       158 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R---------~~~pedvA~~v~f  228 (251)
T d1vl8a_         158 ASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGR---------TGVPEDLKGVAVF  228 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSS---------CBCGGGGHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCC---------CCCHHHHHHHHHH
Confidence            88998887653       46899999999999776421100 0122333333333321         3458999999999


Q ss_pred             HHcCC--ccCCceEEecCCc
Q 023110          202 VLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~  219 (287)
                      ++...  --.|+++.+.++.
T Consensus       229 L~S~~a~~itG~~i~vDGG~  248 (251)
T d1vl8a_         229 LASEEAKYVTGQIIFVDGGW  248 (251)
T ss_dssp             HHSGGGTTCCSCEEEESTTG
T ss_pred             HhCchhCCCcCcEEEeCcCe
Confidence            88543  2378899998875

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.56  E-value=2.4e-14  Score=113.79  Aligned_cols=198  Identities=16%  Similarity=0.143  Sum_probs=129.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++.||+++++.|.++|++|++.+|+.....+.+.    ..+.....++..+++|++|++++++++++.     ++|+
T Consensus        13 TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~----~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   88 (261)
T d1geea_          13 TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVL----EEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDV   88 (261)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            8999999999999999999999999998654222111    112222356888999999999888887642     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--C-CccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||....                    +    ++.++..+.  + ...+|++||.......          +....|
T Consensus        89 LVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~----------~~~~~Y  158 (261)
T d1geea_          89 MINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW----------PLFVHY  158 (261)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC----------TTCHHH
T ss_pred             eeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccC----------cccccc
Confidence            9999987421                    1    333444443  3 3458889987643111          111223


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      ..+|..++.+.+       ..++++..|.||.+..|...... .+.....+.+..++.         -+...+|+|.+++
T Consensus       159 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~v~  229 (261)
T d1geea_         159 AASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG---------YIGEPEEIAAVAA  229 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTS---------SCBCHHHHHHHHH
T ss_pred             ccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCC---------CCCCHHHHHHHHH
Confidence            489998887653       46899999999998766311100 011222222222221         1346899999999


Q ss_pred             HHHcCCc--cCCceEEecCCccc
Q 023110          201 QVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~~  221 (287)
                      .++....  -.|+.+.+.++..+
T Consensus       230 fL~S~~s~~itG~~i~vDGG~sl  252 (261)
T d1geea_         230 WLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCchhcCCcCCeEEECCCeeC
Confidence            9985432  37889999998654

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.56  E-value=2.2e-14  Score=113.42  Aligned_cols=193  Identities=15%  Similarity=0.091  Sum_probs=127.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+.+...+..        .++...+.++++|+.++++++++++..     ++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (254)
T d1hdca_          11 TGGARGLGAEAARQAVAAGARVVLADVLDEEGAATA--------RELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence            799999999999999999999999999876533222        222457889999999999888887642     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....                    +    ++.++..++  +..++|++||...+...          +....|.
T Consensus        83 lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~----------~~~~~Y~  152 (254)
T d1hdca_          83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL----------ALTSSYG  152 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------TTCHHHH
T ss_pred             EEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc----------cchhhHH
Confidence            9999987421                    1    233444444  56799999997753211          1112244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|..++.+.+       ..++++..|.||.+..+     +.    ........-......-..+--...+|+|.+++.+
T Consensus       153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~-----~~----~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL  223 (254)
T d1hdca_         153 ASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP-----MT----AETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKL  223 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH-----HH----HHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc-----cc----hhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHH
Confidence            89998886653       46899999999988654     11    1111111101100000011113479999999999


Q ss_pred             HcCC--ccCCceEEecCCcc
Q 023110          203 LGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~~  220 (287)
                      +...  --.|+.+.+.++..
T Consensus       224 ~S~~a~~itG~~i~vDGG~t  243 (254)
T d1hdca_         224 LSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             HSGGGTTCCSCEEEESTTTT
T ss_pred             hchhhCCCCCceEEeCCCcc
Confidence            8543  23788999998754

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.55  E-value=3e-14  Score=112.43  Aligned_cols=194  Identities=15%  Similarity=0.167  Sum_probs=123.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|.++|++|++.+|+......       ....+...++..+++|++|++++++++++.     ++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~-------~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1          11 TGGANGIGRAIAERFAVEGADIAIADLVPAPEAE-------AAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHH-------HHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211       112223467889999999999888876542     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....                    +    ++.++..++  +..++|++||.......          +....|.
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~----------~~~~~Y~  153 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI----------EAYTHYI  153 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC----------SSCHHHH
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC----------cccccch
Confidence            9999998421                    1    333444444  55789999997653211          1112234


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|...+.+.+       ..|+++..|.||.+-.+................. ..+       ..-+...+|+|++++.+
T Consensus       154 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~-~~~-------l~r~~~pedvA~~v~fL  225 (247)
T d2ew8a1         154 STKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNM-LQA-------IPRLQVPLDLTGAAAFL  225 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CT-TSS-------SCSCCCTHHHHHHHHHH
T ss_pred             hhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHH-hcc-------CCCCCCHHHHHHHHHHH
Confidence            88988876553       4689999999999876642111111111111110 000       11245689999999998


Q ss_pred             HcCCc--cCCceEEecCCc
Q 023110          203 LGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~  219 (287)
                      +....  -.|+.+.+.++-
T Consensus       226 ~S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         226 ASDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             TSGGGTTCCSCEEEESSSC
T ss_pred             hCchhcCCcCCeEEECCCE
Confidence            85432  378899988874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.55  E-value=2e-14  Score=113.41  Aligned_cols=192  Identities=13%  Similarity=0.101  Sum_probs=126.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|.++|++|++.+|+.+.. +..        +  ..+..++++|++|.+++++++++.     ++|+
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~--------~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   79 (248)
T d2d1ya1          11 TGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVA--------E--AIGGAFFQVDLEDERERVRFVEEAAYALGRVDV   79 (248)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHH--------H--HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHH--------H--HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCe
Confidence            79999999999999999999999999986542 111        1  125678899999998888777642     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....                    +    ++.++..++  +..++|++||...+...          +....|.
T Consensus        80 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~----------~~~~~Y~  149 (248)
T d2d1ya1          80 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE----------QENAAYN  149 (248)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC----------TTBHHHH
T ss_pred             EEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc----------cccchhH
Confidence            9999987421                    1    233444443  45699999997763211          1112234


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCC-----CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      .+|..++.+.+       ..++++..|.||.+-.|...     ........+...+..++         .-+...+|+|.
T Consensus       150 asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedia~  220 (248)
T d2d1ya1         150 ASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL---------RRLGKPEEVAE  220 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTT---------SSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCC---------CCCcCHHHHHH
Confidence            89998887653       46899999999988654200     00000111111111111         12456899999


Q ss_pred             HHHHHHcCC--ccCCceEEecCCcccC
Q 023110          198 AFVQVLGNE--KASRQVFNISGEKYVT  222 (287)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (287)
                      ++..++...  --.|+.+.+.++-..|
T Consensus       221 ~v~fL~S~~s~~itG~~i~vDGG~tas  247 (248)
T d2d1ya1         221 AVLFLASEKASFITGAILPVDGGMTAS  247 (248)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHhCchhcCCCCcEEEcCcCcccc
Confidence            999998543  2378899998886544

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.54  E-value=5.1e-14  Score=110.64  Aligned_cols=187  Identities=16%  Similarity=0.191  Sum_probs=127.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++.||+++++.|+++|++|++.+|+.....+..        .+....+.++++|++|++++++++++.     .+|+
T Consensus        12 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_          12 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA--------AELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            799999999999999999999999999876532111        222457889999999999888777642     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....                    +    ++.++..+.  +..++|++||...+....          ....|.
T Consensus        84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~----------~~~~Y~  153 (244)
T d1nffa_          84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV----------ACHGYT  153 (244)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TBHHHH
T ss_pred             EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccc----------cccchh
Confidence            9999998421                    1    222333333  556899999977532111          112234


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      .+|..++.+.+       ..|+++..|.||.+-.|...     .+     ......   .  ...-+...+|+|.+++.+
T Consensus       154 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~-----~~-----~~~~~~---~--pl~R~~~p~diA~~v~fL  218 (244)
T d1nffa_         154 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-----WV-----PEDIFQ---T--ALGRAAEPVEVSNLVVYL  218 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-----TS-----CTTCSC---C--SSSSCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHh-----hh-----hHHHHh---c--cccCCCCHHHHHHHHHHH
Confidence            89998887653       46899999999988765311     00     000000   0  011256799999999999


Q ss_pred             HcCC--ccCCceEEecCCcc
Q 023110          203 LGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~~  220 (287)
                      +...  --+|+.+.+.++..
T Consensus       219 ~s~~s~~itG~~i~vDGG~~  238 (244)
T d1nffa_         219 ASDESSYSTGAEFVVDGGTV  238 (244)
T ss_dssp             HSGGGTTCCSCEEEESTTGG
T ss_pred             hChhhCCCcCCEEEECCCee
Confidence            8543  24788999988764

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.54  E-value=1.5e-14  Score=113.77  Aligned_cols=191  Identities=15%  Similarity=0.155  Sum_probs=128.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||++.||+++++.|.++|++|++.+|+.+...+.         .+...++..+.+|+.|.+++++++++. ++|++||+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~---------~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnn   81 (242)
T d1cyda_          11 TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSL---------AKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   81 (242)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---------HHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEEC
Confidence            79999999999999999999999999987653211         112357889999999999999999875 68999999


Q ss_pred             CCCCcc--------------------c----HHHHHHhC-C--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhh
Q 023110           80 NGREAD--------------------E----VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (287)
Q Consensus        80 a~~~~~--------------------~----~~~ll~~~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k  132 (287)
                      ||....                    +    ++.++..+ +  ...++|++||...+....          ....|..+|
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------~~~~Y~asK  151 (242)
T d1cyda_          82 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP----------NLITYSSTK  151 (242)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT----------TBHHHHHHH
T ss_pred             CccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCC----------ccccccchH
Confidence            987421                    1    22233322 2  345899999976532111          112234899


Q ss_pred             HHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHc
Q 023110          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (287)
                      ..++.+.+       ..|+++..|.||.+-.|.... ...+.....+.+..++.         -+...+|+|.+++.++.
T Consensus       152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~peeva~~v~fL~S  222 (242)
T d1cyda_         152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLR---------KFAEVEDVVNSILFLLS  222 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTS---------SCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhC
Confidence            98887653       468999999999886542100 00112223333322221         24558999999999885


Q ss_pred             CC--ccCCceEEecCCc
Q 023110          205 NE--KASRQVFNISGEK  219 (287)
Q Consensus       205 ~~--~~~~~~~~i~~~~  219 (287)
                      ..  --.|+.+.+.++.
T Consensus       223 ~~s~~itG~~i~vDGG~  239 (242)
T d1cyda_         223 DRSASTSGGGILVDAGY  239 (242)
T ss_dssp             GGGTTCCSSEEEESTTG
T ss_pred             chhcCcCCceEEeCcch
Confidence            43  2378899998874

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.54  E-value=3.8e-14  Score=112.56  Aligned_cols=197  Identities=14%  Similarity=0.144  Sum_probs=118.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc------CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~------~~~d   74 (287)
                      |||++-||+++++.|+++|++|++.+|+.....+...     .+.....++..+.+|++++++++++++.      -.+|
T Consensus        14 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~-----~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id   88 (259)
T d1xq1a_          14 TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLS-----KWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   88 (259)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcc
Confidence            8999999999999999999999999998765332211     1122235788999999999888777653      1489


Q ss_pred             EEEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      ++||+||....                    +    ++.++..++  +..++|++||........          ....|
T Consensus        89 ilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~----------~~~~Y  158 (259)
T d1xq1a_          89 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS----------VGSIY  158 (259)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------CCHH
T ss_pred             cccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccc----------ccccc
Confidence            99999987321                    1    233344443  557999999976532111          11123


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      ..+|..++.+.+       ..|+++..|.||.+-.|...............+..++         .-+...+|+|.+++.
T Consensus       159 ~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~f  229 (259)
T d1xq1a_         159 SATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPL---------GRFGEPEEVSSLVAF  229 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHHH
T ss_pred             cccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCC---------CCCcCHHHHHHHHHH
Confidence            489998876653       4689999999999876632111111111111111111         124568999999999


Q ss_pred             HHcCC--ccCCceEEecCCccc
Q 023110          202 VLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~~  221 (287)
                      ++...  --.|+.+.+.++..+
T Consensus       230 L~S~~s~~iTG~~i~vDGG~s~  251 (259)
T d1xq1a_         230 LCMPAASYITGQTICVDGGLTV  251 (259)
T ss_dssp             HTSGGGTTCCSCEEECCCCEEE
T ss_pred             HhCchhcCCcCcEEEeCCCEEC
Confidence            88532  237889998887544

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.3e-13  Score=108.81  Aligned_cols=193  Identities=18%  Similarity=0.182  Sum_probs=129.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+.+...+         +.+...++.++.+|++|+++++++++..     ++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~---------~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1          12 TGGGRGIGAGIVRAFVNSGARVVICDKDESGGRA---------LEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998665321         1222357889999999999888887642     7999


Q ss_pred             EEecCCCCc---------------------cc----HHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREA---------------------DE----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~---------------------~~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||...                     .+    ++.++..++ +..++|++||........          ....|.
T Consensus        83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~----------~~~~Y~  152 (250)
T d1ydea1          83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA----------QAVPYV  152 (250)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT----------TCHHHH
T ss_pred             EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccccc----------CcchhH
Confidence            999998631                     11    233444444 446899999977542211          112244


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCC-----CCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL-----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      .+|..++.+.+       ..++++..|.||.|-.|.     ....-....+.......++.         -+...+|+|.
T Consensus       153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~g~p~eva~  223 (250)
T d1ydea1         153 ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG---------RMGQPAEVGA  223 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS---------SCBCHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCC---------CCCCHHHHHH
Confidence            89998877653       468999999999986542     00111112233333332321         2456899999


Q ss_pred             HHHHHHcC-CccCCceEEecCCccc
Q 023110          198 AFVQVLGN-EKASRQVFNISGEKYV  221 (287)
Q Consensus       198 ~~~~~~~~-~~~~~~~~~i~~~~~~  221 (287)
                      +++.++.. .--.|+.+.+.++..+
T Consensus       224 ~v~fL~Sda~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         224 AAVFLASEANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             HHHHHHHHCTTCCSCEEEESTTTTS
T ss_pred             HHHHHhCccCCCcCCeEEECCCccc
Confidence            99988753 2237889999887543

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.53  E-value=2.2e-14  Score=113.45  Aligned_cols=193  Identities=19%  Similarity=0.208  Sum_probs=124.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|.++|++|++.+|+.+...+...     .+. ...++.++.+|+.|++++.++++..     ++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   85 (251)
T d1zk4a1          12 TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAK-----SVG-TPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST   85 (251)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HhC-CCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceE
Confidence            8999999999999999999999999998765321111     000 1357899999999999888877642     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CC-ccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+|+....                    +    ++.++..+.  +. .++|++||...+-..          +....|
T Consensus        86 LVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~----------~~~~~Y  155 (251)
T d1zk4a1          86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD----------PSLGAY  155 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC----------TTCHHH
T ss_pred             EEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccC----------CCchhH
Confidence            9999988421                    1    233444444  32 478999997653111          111223


Q ss_pred             hhhhHHHHHHh---------hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcC-CCccCCCCCCceeeeeeHHHHHHH
Q 023110          129 HKGKLNTESVL---------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~~~k~~~E~~~---------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      ..+|..++.+.         ..+++++..|.||.+..+.........   ..... ..+++       .-+...+|+|.+
T Consensus       156 ~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~pl-------~R~~~pedvA~~  225 (251)
T d1zk4a1         156 NASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE---EAMSQRTKTPM-------GHIGEPNDIAYI  225 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH---HHHTSTTTCTT-------SSCBCHHHHHHH
T ss_pred             HHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHH---HHHHHHhCCCC-------CCCcCHHHHHHH
Confidence            38888766443         245899999999998665211100011   11111 11111       125578999999


Q ss_pred             HHHHHcCCc--cCCceEEecCCc
Q 023110          199 FVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      ++.++....  -.|+.+.+.++.
T Consensus       226 v~fL~S~~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         226 CVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhCchhCCCcCcEEEECccc
Confidence            999885432  378899998874

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.52  E-value=7.5e-14  Score=110.85  Aligned_cols=196  Identities=15%  Similarity=0.116  Sum_probs=129.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc----C--Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K--GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~----~--~~d   74 (287)
                      |||++-||+++++.|.++|++|++.+|+.+...+..     .++......+.++.+|++|++++++++++    .  .+|
T Consensus        14 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~id   88 (259)
T d2ae2a_          14 TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL-----TQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN   88 (259)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCce
Confidence            799999999999999999999999999876532221     11222235678899999999888877653    2  489


Q ss_pred             EEEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      ++||+||....                    +    ++.++..+.  +..++|++||.......          +....|
T Consensus        89 ilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~----------~~~~~Y  158 (259)
T d2ae2a_          89 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV----------PYEAVY  158 (259)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC----------TTCHHH
T ss_pred             EEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccc----------ccccch
Confidence            99999997321                    1    223333333  45689999997653211          111223


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCC----CCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ..+|...+.+.+       ..++++..|.||.+-.+..    ........+....+..++.         -+...+|+|.
T Consensus       159 ~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~g~pedvA~  229 (259)
T d2ae2a_         159 GATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR---------RMGEPKELAA  229 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC---------SCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC---------CCcCHHHHHH
Confidence            389998877653       4689999999999865421    0111112233333333332         1345899999


Q ss_pred             HHHHHHcCCc--cCCceEEecCCcc
Q 023110          198 AFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      +++.++....  -.|+.+.+.++-.
T Consensus       230 ~v~fL~S~~s~~itG~~i~VDGG~~  254 (259)
T d2ae2a_         230 MVAFLCFPAASYVTGQIIYVDGGLM  254 (259)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhCchhCCCcCcEEEECCCeE
Confidence            9999886432  3788999988753

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.52  E-value=3.8e-14  Score=112.77  Aligned_cols=201  Identities=15%  Similarity=0.180  Sum_probs=126.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+.....+.+..   ........++.++.+|++|+++++++++..     ++|+
T Consensus        10 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~---~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   86 (260)
T d1x1ta1          10 TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRA---GLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDI   86 (260)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHH---HHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHH---HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCcE
Confidence            89999999999999999999999999986442221110   111122457889999999999998887642     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....                    +    ++.++..++  +..++|++||........          ....|.
T Consensus        87 LVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~----------~~~~Y~  156 (260)
T d1x1ta1          87 LVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASA----------NKSAYV  156 (260)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TCHHHH
T ss_pred             EEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccC----------Ccchhh
Confidence            9999997421                    1    233444444  556999999977532111          111234


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCc-------cCCCCCCceeeeeeHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-------PIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~~D~  195 (287)
                      .+|...+.+.+       ..|+++..|.||.+-.|....     .+.........       ..........-+...+|+
T Consensus       157 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedi  231 (260)
T d1x1ta1         157 AAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEK-----QISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL  231 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------------CHHHHCTTCCCBCHHHH
T ss_pred             hhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhh-----hhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHH
Confidence            89998886653       468999999999987663111     11000000000       000000001124669999


Q ss_pred             HHHHHHHHcCC--ccCCceEEecCCc
Q 023110          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      |.+++.++...  --.|+.+.+.++-
T Consensus       232 A~~v~fL~S~~a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         232 GGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhChhhCCCcCCEEEECcch
Confidence            99999998543  2378899998874

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.52  E-value=8.5e-14  Score=110.66  Aligned_cols=194  Identities=12%  Similarity=0.196  Sum_probs=127.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|.++|++|++.+|+.+...+..     ..+.....++..+.+|++|+++++++++..     ++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   85 (260)
T d1zema1          11 TGAGGNIGLATALRLAEEGTAIALLDMNREALEKAE-----ASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF   85 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCe
Confidence            799999999999999999999999999876532111     112222457889999999998888887642     7999


Q ss_pred             EEecCCCCcc---------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||++|....                     +    ++.++..+.  +..++|++||...+....          ....|
T Consensus        86 lVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~----------~~~~Y  155 (260)
T d1zema1          86 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP----------NMAAY  155 (260)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT----------TBHHH
T ss_pred             ehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCc----------chHHH
Confidence            9999986311                     1    223334333  567999999977542211          11123


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCC---------------CCChhHHHHHHHHcCCCccCCCCCCce
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN---------------YNPVEEWFFHRLKAGRPIPIPGSGIQV  186 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (287)
                      ..+|...+.+.+       ..|+++..|.||.|-.+..               ...........+....++.        
T Consensus       156 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~--------  227 (260)
T d1zema1         156 GTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMR--------  227 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTS--------
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCC--------
Confidence            489998887653       4689999999999866520               0011112222333332221        


Q ss_pred             eeeeeHHHHHHHHHHHHcCC--ccCCceEEecCC
Q 023110          187 TQLGHVKDLARAFVQVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~  218 (287)
                       -+...+|+|.+++.++...  --.|+.+.+.++
T Consensus       228 -R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         228 -RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             -SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             -CCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence             1345899999999998643  236788887764

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.52  E-value=6.6e-14  Score=111.00  Aligned_cols=190  Identities=17%  Similarity=0.199  Sum_probs=127.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|.++|++|++.+|+.+...+..     ..+.....++..+++|++|++++.++++..     ++|+
T Consensus         7 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           7 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVA-----SEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             cCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            799999999999999999999999999876532211     122222457889999999999888877642     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC---CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||....                    +    ++.++..+.   +..++|++||...+..           ......
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~-----------~~~~~~  150 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG-----------NPELAV  150 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhccc-----------Cccccc
Confidence            9999997421                    1    223333322   3467999998765321           111223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHH---------------HHHHcCCCccCCCCCCc
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF---------------HRLKAGRPIPIPGSGIQ  185 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~  185 (287)
                      | .+|...+.+.+       ..|+++..|.||.+-.|     +...+.               ....+..++        
T Consensus       151 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl--------  217 (255)
T d1gega_         151 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP-----MWAEIDRQVSEAAGKPLGYGTAEFAKRITL--------  217 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH-----HHHHHHHHHHHHHTCCTTHHHHHHHTTCTT--------
T ss_pred             chhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccCh-----HHhhhhhhhHhhhcccchhHHHHHHhcCCC--------
Confidence            4 88998887653       46899999999988554     222211               111222111        


Q ss_pred             eeeeeeHHHHHHHHHHHHcCC--ccCCceEEecCCcc
Q 023110          186 VTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                       .-+...+|+|++++.++...  --.|+.+.+.++-.
T Consensus       218 -~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         218 -GRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             -CCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCEE
Confidence             12456899999999988543  23788999988753

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=2.1e-14  Score=116.21  Aligned_cols=201  Identities=10%  Similarity=0.136  Sum_probs=126.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+.....+...++..........++..+++|++|++++.++++..     ++|+
T Consensus        18 TGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   97 (297)
T d1yxma1          18 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINF   97 (297)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhCCeEE
Confidence            79999999999999999999999999987653211100000000001346889999999999888877642     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+|+....                    +    ++.++..+.  +..++|++|+....+           .+....|.
T Consensus        98 LVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~-----------~~~~~~Y~  166 (297)
T d1yxma1          98 LVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG-----------FPLAVHSG  166 (297)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC-----------CTTCHHHH
T ss_pred             EEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccc-----------ccccccch
Confidence            9999987421                    1    233444444  455677776643211           11112233


Q ss_pred             hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC---ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      .+|..++.+.+       ..|+++..|.||.+..+....   .....+.....+..++         .-+...+|+|.++
T Consensus       167 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~pl---------gR~g~pedvA~~v  237 (297)
T d1yxma1         167 AARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA---------KRIGVPEEVSSVV  237 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT---------SSCBCTHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence            88998887653       468999999999997763111   1111111111111111         1245689999999


Q ss_pred             HHHHcCC--ccCCceEEecCCccc
Q 023110          200 VQVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~~~  221 (287)
                      +.++...  --+|+.+.+.++..+
T Consensus       238 ~fL~Sd~s~~iTG~~i~VDGG~sl  261 (297)
T d1yxma1         238 CFLLSPAASFITGQSVDVDGGRSL  261 (297)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhCchhcCcCCcEEEeCcChhh
Confidence            9998543  237899999998643

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.51  E-value=9.5e-14  Score=110.10  Aligned_cols=189  Identities=16%  Similarity=0.184  Sum_probs=129.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++.||+++++.|+++|++|++.+|+.+...+.        ..+...++..+.+|++|+++++++++..     ++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~--------~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_          11 TGSARGIGRAFAEAYVREGARVAIADINLEAARAT--------AAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             ETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            79999999999999999999999999986653221        1223467889999999999998887642     7999


Q ss_pred             EEecCCCCcc--------------------cH----HHHHHh-CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD--------------------EV----EPILDA-LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~ll~~-~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||....                    ++    +.++.. ++  +..++|++||...+-..           .....
T Consensus        83 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-----------~~~~~  151 (256)
T d1k2wa_          83 LVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE-----------ALVGV  151 (256)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccc-----------ccccc
Confidence            9999997421                    12    222332 22  34689999997753211           11223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHH---------------HHHHcCCCccCCCCCCc
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF---------------HRLKAGRPIPIPGSGIQ  185 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~  185 (287)
                      | .+|...+.+.+       ..|+++..|.||.+-.|.     ...+.               +.+....++        
T Consensus       152 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------  218 (256)
T d1k2wa_         152 YCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH-----WDGVDAKFADYENLPRGEKKRQVGAAVPF--------  218 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT-----HHHHHHHHHHHHTCCTTHHHHHHHHHSTT--------
T ss_pred             hhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchh-----hhhhhhhhhhhccCChHHHHHHHHhcCCC--------
Confidence            4 88998887653       468999999999887663     11111               111111111        


Q ss_pred             eeeeeeHHHHHHHHHHHHcCC--ccCCceEEecCCcccC
Q 023110          186 VTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (287)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (287)
                       .-+...+|+|.+++.++...  --.|+.+.+.++..+|
T Consensus       219 -gR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         219 -GRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             -SSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             -CCCcCHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence             12456899999999987543  2378899999987654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.51  E-value=5.8e-14  Score=110.32  Aligned_cols=190  Identities=18%  Similarity=0.252  Sum_probs=127.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++.||+++++.|+++|++|++.+|+.....+..        .+...++.++++|+++++++++++++.     ++|+
T Consensus        11 tGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1          11 TGAASGIGRAALDLFAREGASLVAVDREERLLAEAV--------AALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            799999999999999999999999999876643222        222467889999999999998877643     6999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCCCCccEEEEecceeeccCCCCCCCCCCCCCCCcch-h
Q 023110           76 VYDINGREAD--------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (287)
                      +||+|+....                    .    ++.++..+.+...++.+||.....            .+....| .
T Consensus        83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~------------~~~~~~Y~~  150 (241)
T d2a4ka1          83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG------------AFGLAHYAA  150 (241)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC------------HHHHHHHHH
T ss_pred             eccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccc------------ccCccccch
Confidence            9999876321                    1    222333344444555555543211            1111234 8


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHH
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (287)
                      +|...|.+.+       ..++++..|.||.+-.+... .+.........+..++.         -+...+|+|+++..++
T Consensus       151 sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~-~~~~~~~~~~~~~~p~~---------r~~~p~dva~~v~fL~  220 (241)
T d2a4ka1         151 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTA-GLPPWAWEQEVGASPLG---------RAGRPEEVAQAALFLL  220 (241)
T ss_dssp             CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGT-TSCHHHHHHHHHTSTTC---------SCBCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHH-hhhHhHHHHHHhCCCCC---------CCcCHHHHHHHHHHHh
Confidence            8988887663       45799999999998655321 12233344444433332         2446899999999999


Q ss_pred             cCC--ccCCceEEecCCcc
Q 023110          204 GNE--KASRQVFNISGEKY  220 (287)
Q Consensus       204 ~~~--~~~~~~~~i~~~~~  220 (287)
                      ...  --+|+.+.+.++..
T Consensus       221 S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         221 SEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             SGGGTTCCSCEEEESTTTT
T ss_pred             cchhCCCcCceEEeCCCcc
Confidence            643  23788999988754

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.51  E-value=1.7e-13  Score=108.74  Aligned_cols=196  Identities=14%  Similarity=0.111  Sum_probs=127.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhh----cC--Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----AK--GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----~~--~~d   74 (287)
                      |||++-||++++++|+++|++|++.+|++....+..     ..+......+.++.+|+.+.++++++++    ..  ..|
T Consensus        12 TGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~-----~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~id   86 (258)
T d1ae1a_          12 TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL-----EIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN   86 (258)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcE
Confidence            799999999999999999999999999876532221     1222234567889999999988877654    22  489


Q ss_pred             EEEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +++|+++....                    +    ++.++..+.  +..++|++||.......          +....|
T Consensus        87 ilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~----------~~~~~Y  156 (258)
T d1ae1a_          87 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL----------PSVSLY  156 (258)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC----------TTCHHH
T ss_pred             EEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccc----------ccchhH
Confidence            99999987421                    1    222333333  66799999997763221          111223


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-----ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ..+|...+.+.+       ..++++..|.||.+..|....     ..............++.         -+...+|+|
T Consensus       157 ~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg---------R~~~pediA  227 (258)
T d1ae1a_         157 SASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMG---------RAGKPQEVS  227 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTC---------SCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCC---------CCcCHHHHH
Confidence            388888877653       468999999999998764211     11122333333322221         156799999


Q ss_pred             HHHHHHHcCC--ccCCceEEecCCcc
Q 023110          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      .+++.++...  --+|+.+.+.++-.
T Consensus       228 ~~v~fL~S~~s~~itG~~i~vDGG~s  253 (258)
T d1ae1a_         228 ALIAFLCFPAASYITGQIIWADGGFT  253 (258)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhChhhCCCcCcEEEeCCCee
Confidence            9999998543  34788899888753

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.50  E-value=1.2e-13  Score=109.74  Aligned_cols=194  Identities=21%  Similarity=0.273  Sum_probs=127.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|.++|++|++.+|+.+...+..     ..+.....++.++++|++|+++++++++..     ++|+
T Consensus         8 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~-----~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (257)
T d2rhca1           8 TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL-----KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV   82 (257)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999876532211     112222457889999999999888877642     6999


Q ss_pred             EEecCCCCcc--------------------cHH----HHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           76 VYDINGREAD--------------------EVE----PILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~----~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      +||+||....                    +..    .++..+.    +..++|++||...+....          ....
T Consensus        83 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~----------~~~~  152 (257)
T d2rhca1          83 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV----------HAAP  152 (257)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCT----------TCHH
T ss_pred             EEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccc----------cchh
Confidence            9999997421                    222    2333222    446899998876532111          1122


Q ss_pred             chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCC----------CCChhHHHHHHHHcCCCccCCCCCCceeeee
Q 023110          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN----------YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                      |..+|..++.+.+       ..++++..|.||.+-.|..          ...........+.+..++.         -+.
T Consensus       153 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Plg---------R~~  223 (257)
T d2rhca1         153 YSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG---------RYV  223 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTS---------SCB
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCC---------CCc
Confidence            4489998877653       3579999999998865420          0001112223333332221         245


Q ss_pred             eHHHHHHHHHHHHcCC--ccCCceEEecCC
Q 023110          191 HVKDLARAFVQVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       191 ~~~D~a~~~~~~~~~~--~~~~~~~~i~~~  218 (287)
                      ..+|+|.+++.++...  --.|+.+.+.++
T Consensus       224 ~pedia~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         224 QPSEVAEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence            6899999999998542  237888888876

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.49  E-value=1.5e-13  Score=109.00  Aligned_cols=197  Identities=16%  Similarity=0.195  Sum_probs=128.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh-hcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||++-||+++++.|.++|++|++.+|+.....+...    ..... ...++..+++|++|+++++++++..     ++|
T Consensus        10 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~----~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iD   85 (258)
T d1iy8a_          10 TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKA----AVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRID   85 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999998765321111    00000 1246888999999999988887642     799


Q ss_pred             EEEecCCCCc---------------------cc----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           75 VVYDINGREA---------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~---------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      ++||+||...                     .+    ++.++..++  +..++|++||...+-..          +....
T Consensus        86 iLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~----------~~~~~  155 (258)
T d1iy8a_          86 GFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI----------GNQSG  155 (258)
T ss_dssp             EEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC----------SSBHH
T ss_pred             EEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC----------CCchH
Confidence            9999998631                     11    223333343  56789999997653211          11122


Q ss_pred             chhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCC-------CChhHHHHHHHHcCCCccCCCCCCceeeeeeHH
Q 023110          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       128 ~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                      |..+|..++.+.+       ..++++..|.||.+..|...       ............+..++.         -+...+
T Consensus       156 Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~~~p~  226 (258)
T d1iy8a_         156 YAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSK---------RYGEAP  226 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTC---------SCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCC---------CCcCHH
Confidence            3388988776553       46899999999998665200       000111222222222221         245689


Q ss_pred             HHHHHHHHHHcCC--ccCCceEEecCCcc
Q 023110          194 DLARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      |+|.+++.++...  --.|+.+.+.++..
T Consensus       227 dvA~~v~fL~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         227 EIAAVVAFLLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence            9999999998543  23788999988764

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.48  E-value=1.3e-13  Score=110.22  Aligned_cols=199  Identities=16%  Similarity=0.177  Sum_probs=130.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+.....+...+     +. ....+.++.+|+.|+++++++++..     ++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~-----l~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   85 (268)
T d2bgka1          12 TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNN-----IG-SPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI   85 (268)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----HC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-----hc-CCCceEEEEccCCCHHHHHHHHHHHHHHcCCcce
Confidence            79999999999999999999999999987653211110     00 0346788999999999888887642     7999


Q ss_pred             EEecCCCCcc----------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc
Q 023110           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (287)
                      +||+||....                      +    ++.++..+.  +..++|++||...+...          .....
T Consensus        86 lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~----------~~~~~  155 (268)
T d2bgka1          86 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG----------EGVSH  155 (268)
T ss_dssp             EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC----------TTSCH
T ss_pred             eccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccc----------ccccc
Confidence            9999986210                      1    333444443  55689999887653211          11112


Q ss_pred             ch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC--hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      +| .+|..++.+.+       ..++++..|.||.+-.|.....  .............. ...+      -+...+|+|.
T Consensus       156 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~~g------r~~~pedvA~  228 (268)
T d2bgka1         156 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA-NLKG------TLLRAEDVAD  228 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC-SSCS------CCCCHHHHHH
T ss_pred             ccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhcc-ccCC------CCcCHHHHHH
Confidence            45 88998887653       4689999999999987742211  11111122111111 1111      2456899999


Q ss_pred             HHHHHHcCC--ccCCceEEecCCcccC
Q 023110          198 AFVQVLGNE--KASRQVFNISGEKYVT  222 (287)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (287)
                      +++.++...  --.|+.+.+.++...+
T Consensus       229 ~v~fL~S~~s~~itGq~i~VDGG~t~~  255 (268)
T d2bgka1         229 AVAYLAGDESKYVSGLNLVIDGGYTRT  255 (268)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHhChhhCCccCceEEECcCcccC
Confidence            999998543  2378999999986544

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.48  E-value=3.6e-13  Score=105.31  Aligned_cols=184  Identities=15%  Similarity=0.192  Sum_probs=121.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh-HHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~-~~~~~~~~~~~~d~vi~~   79 (287)
                      |||++-||+++++.|.++|++|++.+|+.+...              ..+.+++.+|+.+. +.+.+.+.  ++|++||+
T Consensus        10 TGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~--------------~~~~~~~~~Dv~~~~~~~~~~~g--~iD~lVnn   73 (234)
T d1o5ia_          10 LAASRGIGRAVADVLSQEGAEVTICARNEELLK--------------RSGHRYVVCDLRKDLDLLFEKVK--EVDILVLN   73 (234)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--------------HTCSEEEECCTTTCHHHHHHHSC--CCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH--------------hcCCcEEEcchHHHHHHHHHHhC--CCcEEEec
Confidence            799999999999999999999999999865421              23557788999763 44444454  79999999


Q ss_pred             CCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhH
Q 023110           80 NGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL  133 (287)
Q Consensus        80 a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~  133 (287)
                      ||....                    +    ++.++..++  +..++|++||.......          .....|..+|.
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~----------~~~~~Y~asKa  143 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI----------ENLYTSNSARM  143 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------TTBHHHHHHHH
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccc----------cccccchhHHH
Confidence            987421                    1    233444444  55689999987653211          11122338888


Q ss_pred             HHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC
Q 023110          134 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       134 ~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (287)
                      ..+.+.+       ..|+++..|.||.+-.+.............+.+..++.         -+...+|+|.+++.++...
T Consensus       144 al~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~v~fL~S~~  214 (234)
T d1o5ia_         144 ALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMR---------RMAKPEEIASVVAFLCSEK  214 (234)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTS---------SCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhChh
Confidence            8876553       46899999999988766311111112223333332221         2456899999999988543


Q ss_pred             c--cCCceEEecCCc
Q 023110          207 K--ASRQVFNISGEK  219 (287)
Q Consensus       207 ~--~~~~~~~i~~~~  219 (287)
                      .  -.|+++.+.++.
T Consensus       215 s~~itG~~i~vDGG~  229 (234)
T d1o5ia_         215 ASYLTGQTIVVDGGL  229 (234)
T ss_dssp             GTTCCSCEEEESTTC
T ss_pred             hcCCcCcEEEECccc
Confidence            2  378899998874

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.47  E-value=7e-13  Score=105.32  Aligned_cols=196  Identities=20%  Similarity=0.204  Sum_probs=125.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||++-||.++++.|+++|++|++.+|+.....+...    ..+.....++.++.+|+.|++++.++++.     -++|+
T Consensus        12 TGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~----~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   87 (259)
T d1ja9a_          12 TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVV----AELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDF   87 (259)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHH----HHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            7999999999999999999999988776554322211    12222245788999999999888877763     27999


Q ss_pred             EEecCCCCccc------------------------HHHHHHhCCCCccEEEEecc-eeeccCCCCCCCCCCCCCCCcchh
Q 023110           76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSA-GVYLKSDLLPHCETDTVDPKSRHK  130 (287)
Q Consensus        76 vi~~a~~~~~~------------------------~~~ll~~~~~~~~~i~~Ss~-~v~~~~~~~~~~e~~~~~~~~~~~  130 (287)
                      +||++|.....                        ++.++..++...+.+.++|. +.....          +....|..
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~----------~~~~~Y~a  157 (259)
T d1ja9a_          88 VMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI----------PNHALYAG  157 (259)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC----------CSCHHHHH
T ss_pred             EEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCC----------CCchhHHH
Confidence            99999984211                        33344445533455555543 322111          11122348


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCC-----------CC-CChhHHHHHHHHcCCCccCCCCCCceeeeee
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL-----------NY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~-----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                      +|...+.+.+       ..++++..|.||.+-.+.           .. ......+...+.+..++.         -+..
T Consensus       158 sK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~g~  228 (259)
T d1ja9a_         158 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK---------RIGY  228 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS---------SCBC
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC---------CCcC
Confidence            8988877653       468999999999986431           01 111222333344443332         2456


Q ss_pred             HHHHHHHHHHHHcCCc--cCCceEEecCCc
Q 023110          192 VKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       192 ~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      .+|+|++++.++....  -+|+.+.+.++.
T Consensus       229 p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         229 PADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            8999999999986543  378888888764

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.47  E-value=2.2e-13  Score=107.63  Aligned_cols=190  Identities=16%  Similarity=0.178  Sum_probs=126.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+.+...+.        ..+...+..++++|+.|.++++++++..     ++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_          12 TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQL--------AAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH--------HHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            79999999999999999999999999986553211        1222457888999999998888877643     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcch-
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (287)
                      +||+||....                    +    ++.++..++ +..++|++||...+-.           ......| 
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~-----------~~~~~~Y~  152 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLP-----------IEQYAGYS  152 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSC-----------CTTBHHHH
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcC-----------cccccccc
Confidence            9999997421                    1    334455555 4578999999765321           1112234 


Q ss_pred             hhhHHHHHHhh-------h--CCCcEEEEecCeeecCCCCCChhHHH-----HHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          130 KGKLNTESVLE-------S--KGVNWTSLRPVYIYGPLNYNPVEEWF-----FHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       130 ~~k~~~E~~~~-------~--~~~~~~ilR~~~v~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      .+|...+.+.+       .  +++++..|.||.+..+.     ....     .+....... ..    ...--+...+|+
T Consensus       153 asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~-----~~~~~~~~~~~~~~~~~~-~~----~~~gr~~~pedv  222 (253)
T d1hxha_         153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM-----MQASLPKGVSKEMVLHDP-KL----NRAGRAYMPERI  222 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH-----HHHHSCTTCCHHHHBCBT-TT----BTTCCEECHHHH
T ss_pred             chhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHh-----HHhhCcchhhHHHHHhCc-cc----cccCCCCCHHHH
Confidence            88888776542       1  45899999999986652     1100     011111111 00    001135678999


Q ss_pred             HHHHHHHHcCC--ccCCceEEecCCc
Q 023110          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      |++++.++...  --.|+.+++.++-
T Consensus       223 A~~v~fL~S~~s~~itG~~i~VDGG~  248 (253)
T d1hxha_         223 AQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHHhChhhCCCcCcEEEECccH
Confidence            99999998543  2378889988763

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=2.4e-14  Score=113.48  Aligned_cols=197  Identities=16%  Similarity=0.167  Sum_probs=129.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|.++|++|++.+|+.+...+...++..   .....++.++.+|++|+++++++++..     ++|+
T Consensus         9 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   85 (254)
T d2gdza1           9 TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHE---QFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDI   85 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT---TSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH---hcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCcCe
Confidence            79999999999999999999999999987653211110000   000346889999999999888877642     7999


Q ss_pred             EEecCCCCcc----------------cHHHHHHhCC--C---CccEEEEecceeeccCCCCCCCCCCCCCCCcch-hhhH
Q 023110           76 VYDINGREAD----------------EVEPILDALP--N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKL  133 (287)
Q Consensus        76 vi~~a~~~~~----------------~~~~ll~~~~--~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~  133 (287)
                      +||+|+....                .++..+..+.  +   ..++|++||...+-.           ......| .+|.
T Consensus        86 lVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y~asKa  154 (254)
T d2gdza1          86 LVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP-----------VAQQPVYCASKH  154 (254)
T ss_dssp             EEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----------CTTCHHHHHHHH
T ss_pred             ecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccC-----------CCCccchHHHHH
Confidence            9999998522                1333444443  1   256999999765321           1111234 8888


Q ss_pred             HHHHHh---------hhCCCcEEEEecCeeecCCCCCChhHHH------------HHHHHcCCCccCCCCCCceeeeeeH
Q 023110          134 NTESVL---------ESKGVNWTSLRPVYIYGPLNYNPVEEWF------------FHRLKAGRPIPIPGSGIQVTQLGHV  192 (287)
Q Consensus       134 ~~E~~~---------~~~~~~~~ilR~~~v~g~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~i~~  192 (287)
                      .++.+.         ...++++..|.||.+-.|.     ...+            ...+.+..+.         .-+...
T Consensus       155 al~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p  220 (254)
T d2gdza1         155 GIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI-----LESIEKEENMGQYIEYKDHIKDMIKY---------YGILDP  220 (254)
T ss_dssp             HHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH-----HHGGGCHHHHGGGGGGHHHHHHHHHH---------HCCBCH
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChh-----hhhccccccccccHHHHHHHHhcCCC---------CCCcCH
Confidence            766543         2468999999999885441     1110            0111110011         123558


Q ss_pred             HHHHHHHHHHHcCCccCCceEEecCCcccCHHH
Q 023110          193 KDLARAFVQVLGNEKASRQVFNISGEKYVTFDG  225 (287)
Q Consensus       193 ~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~e  225 (287)
                      +|+|++++.++....-+|+.+.+.++..+.++|
T Consensus       221 edvA~~v~fL~s~~~itG~~i~VdGG~~~~~~~  253 (254)
T d2gdza1         221 PLIANGLITLIEDDALNGAIMKITTSKGIHFQD  253 (254)
T ss_dssp             HHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             HHHHHHHHHHHcCCCCCCCEEEECCCCeeeccc
Confidence            999999999998766689999999987765543

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=8.5e-13  Score=103.80  Aligned_cols=191  Identities=13%  Similarity=0.102  Sum_probs=127.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-CccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||++-||+++++.|+++|++|++.+|++....+..+          ..+++...+|+.+.+.++...+.. ++|++||+
T Consensus        12 TGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~   81 (245)
T d2ag5a1          12 TAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----------YPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (245)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----------STTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----------ccCCceeeeeccccccccccccccccceeEEec
Confidence            7999999999999999999999999998765332221          357888899998877766665542 79999999


Q ss_pred             CCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCc-chhhh
Q 023110           80 NGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGK  132 (287)
Q Consensus        80 a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~~~~k  132 (287)
                      +|....                    +    ++.++..+.  +..++|++||...-          ..+..... |..+|
T Consensus        82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~----------~~~~~~~~~Y~~sK  151 (245)
T d2ag5a1          82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS----------VKGVVNRCVYSTTK  151 (245)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT----------TBCCTTBHHHHHHH
T ss_pred             ccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc----------cCCccchhHHHHHH
Confidence            987421                    1    222333333  55689999885420          00111222 34899


Q ss_pred             HHHHHHhh-------hCCCcEEEEecCeeecCCCC-----CChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHH
Q 023110          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (287)
                      ...+.+.+       ..|+++..|.||.+-.|...     ..........+.+..++.         -+...+|+|+++.
T Consensus       152 aal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pedva~~v~  222 (245)
T d2ag5a1         152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTG---------RFATAEEIAMLCV  222 (245)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTS---------SCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCC---------CCcCHHHHHHHHH
Confidence            98887663       46899999999998775310     011112233333332221         2556899999999


Q ss_pred             HHHcCC--ccCCceEEecCCcc
Q 023110          201 QVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      .++...  .-.|+.+.+.++..
T Consensus       223 fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         223 YLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHhChhhCCCcCceEEeCCCcC
Confidence            998643  33788999988754

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.45  E-value=2.8e-13  Score=107.67  Aligned_cols=203  Identities=14%  Similarity=0.193  Sum_probs=129.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++.||+++++.|+++|++|++.+|+.....+...    ....+...++..+++|++|++++.++++..     ++|+
T Consensus        15 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   90 (260)
T d1h5qa_          15 TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTE----KVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG   90 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHH----HHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcE
Confidence            7999999999999999999999999999876432211    111222457889999999999888877532     7999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC---CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+|+....                    +    ++.++..+.   ....++..|+...........   ...+....|
T Consensus        91 lVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~---~~~~~~~~Y  167 (260)
T d1h5qa_          91 LIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL---NGSLTQVFY  167 (260)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET---TEECSCHHH
T ss_pred             ecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc---ccCccccch
Confidence            9999987421                    1    223344432   344566666554321110000   000111223


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      ..+|...+.+.+       ..|+++..|.||.+-.+... ...........+..++..         +...+|+|.+++.
T Consensus       168 ~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~-~~~~~~~~~~~~~~pl~R---------~g~pedvA~~v~f  237 (260)
T d1h5qa_         168 NSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA-HMDKKIRDHQASNIPLNR---------FAQPEEMTGQAIL  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG-GSCHHHHHHHHHTCTTSS---------CBCGGGGHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchh-ccCHHHHHHHHhcCCCCC---------CcCHHHHHHHHHH
Confidence            488988876653       46899999999998665321 122333444444333322         3458999999999


Q ss_pred             HHcCCc--cCCceEEecCCcc
Q 023110          202 VLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~  220 (287)
                      ++....  -+|+.+.+.++..
T Consensus       238 L~S~~s~~itG~~i~VDGG~~  258 (260)
T d1h5qa_         238 LLSDHATYMTGGEYFIDGGQL  258 (260)
T ss_dssp             HHSGGGTTCCSCEEEECTTGG
T ss_pred             HhcchhCCCcCceEEECCCee
Confidence            885432  3788999988753

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.44  E-value=1.9e-13  Score=108.87  Aligned_cols=195  Identities=14%  Similarity=0.129  Sum_probs=121.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh---hcCCeEEEEecCCChHHHHhhhhcC-----C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~D~~d~~~~~~~~~~~-----~   72 (287)
                      |||++-||+++++.|+++|++|++.+|+.+...+...     ++..   ...++.++.+|+++.++++++++..     +
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~-----~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   85 (264)
T d1spxa_          11 TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQ-----QILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK   85 (264)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999998765321111     0000   0246889999999999888877642     7


Q ss_pred             ccEEEecCCCCc------------------------cc----HHHHHHhCC-CCccEEEEecc-eeeccCCCCCCCCCCC
Q 023110           73 FDVVYDINGREA------------------------DE----VEPILDALP-NLEQFIYCSSA-GVYLKSDLLPHCETDT  122 (287)
Q Consensus        73 ~d~vi~~a~~~~------------------------~~----~~~ll~~~~-~~~~~i~~Ss~-~v~~~~~~~~~~e~~~  122 (287)
                      +|++||+||...                        .+    ++.++..++ +..++|.++|. ..+..           
T Consensus        86 iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~-----------  154 (264)
T d1spxa_          86 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA-----------  154 (264)
T ss_dssp             CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC-----------
T ss_pred             CCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccccc-----------
Confidence            999999998631                        01    223334444 33455555553 32211           


Q ss_pred             CCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC--------hhHHHHHHHHcCCCccCCCCCCce
Q 023110          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQV  186 (287)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~  186 (287)
                      ......| .+|...+.+.+       ..|+++..|.||.+-.+.....        ..........+..++.        
T Consensus       155 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~--------  226 (264)
T d1spxa_         155 TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG--------  226 (264)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTS--------
T ss_pred             CCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCC--------
Confidence            1112235 88998876653       4689999999999876532110        0011111222222221        


Q ss_pred             eeeeeHHHHHHHHHHHHcCC---ccCCceEEecCCcc
Q 023110          187 TQLGHVKDLARAFVQVLGNE---KASRQVFNISGEKY  220 (287)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~---~~~~~~~~i~~~~~  220 (287)
                       -+...+|+|.+++.++..+   --.|+.+.+.++..
T Consensus       227 -R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         227 -VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             -SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             -CCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence             1345899999999988533   24788999988754

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.42  E-value=1.7e-12  Score=102.90  Aligned_cols=195  Identities=12%  Similarity=0.094  Sum_probs=123.7

Q ss_pred             CCccc--chHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCc
Q 023110            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~   73 (287)
                      |||+|  -||++++++|+++|++|++.+|+..... ..     ............+++|+.|+++++++++.     -++
T Consensus        14 TGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~-~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (256)
T d1ulua_          14 MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRP-EA-----EKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL   87 (256)
T ss_dssp             ESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHH-HH-----HHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             ECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHH-HH-----HHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCc
Confidence            79887  6999999999999999998888754311 11     11112234678899999999888887763     269


Q ss_pred             cEEEecCCCCcc------------------------cHHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |++||+++....                        +...+.+++.    ...++|++||.......           ..
T Consensus        88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~-----------~~  156 (256)
T d1ulua_          88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV-----------PK  156 (256)
T ss_dssp             EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC-----------TT
T ss_pred             eEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCC-----------CC
Confidence            999999986311                        1222333322    33579999987653211           11


Q ss_pred             Ccch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ...| .+|...+.+.+       ..|+++..+.||.+..+.... ...........+..++..         +...+|+|
T Consensus       157 ~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R---------~~~pedvA  227 (256)
T d1ulua_         157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRR---------NITQEEVG  227 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSS---------CCCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCC---------CcCHHHHH
Confidence            2234 89998887653       468999999999987764221 111223333333333321         34589999


Q ss_pred             HHHHHHHcCCc--cCCceEEecCCccc
Q 023110          197 RAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (287)
                      .+++.++....  -.|+.+.+.++..+
T Consensus       228 ~~v~fL~S~~s~~itG~~i~VDGG~~~  254 (256)
T d1ulua_         228 NLGLFLLSPLASGITGEVVYVDAGYHI  254 (256)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCchhCCccCCeEEECcCEeC
Confidence            99999986432  37889999888643

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.41  E-value=2.4e-13  Score=107.51  Aligned_cols=190  Identities=13%  Similarity=0.078  Sum_probs=122.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||++.||+++++.|.++|++|++.+|+.....+ +.        .  ....++++|+.+.+++++++++     -++|+
T Consensus         6 TGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~-~~--------~--~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDi   74 (252)
T d1zmta1           6 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE-LE--------A--FAETYPQLKPMSEQEPAELIEAVTSAYGQVDV   74 (252)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH-HH--------H--HHHHCTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH--------h--hhCcEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            8999999999999999999999999998665321 11        1  1122345777776655555442     17999


Q ss_pred             EEecCCCCcc---------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+||....                     +    ++.++..++  +..++|++||...+....          ....|
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~----------~~~~Y  144 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK----------ELSTY  144 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT----------TCHHH
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccc----------ccccc
Confidence            9999876311                     1    223334443  557899999976532211          11123


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCCh-------hHHHHHHHHcCCCccCCCCCCceeeeeeHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      ..+|...+.+.+       ..++++..|.||.+-.+.....+       .+.....+.+..++..         +...+|
T Consensus       145 ~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R---------~g~ped  215 (252)
T d1zmta1         145 TSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQR---------LGTQKE  215 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSS---------CBCHHH
T ss_pred             ccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCC---------CcCHHH
Confidence            489998877653       46899999999999766422111       1122333333223221         345899


Q ss_pred             HHHHHHHHHcCCc--cCCceEEecCCcc
Q 023110          195 LARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      +|.+++.++....  -.|+.+.+.++..
T Consensus       216 vA~~v~fL~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         216 LGELVAFLASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             HHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             HHHHHHHHhCchhcCCcCCeEEECCCce
Confidence            9999999986543  3788999998854

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.41  E-value=1.8e-13  Score=109.55  Aligned_cols=197  Identities=16%  Similarity=0.147  Sum_probs=125.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh---cCCeEEEEecCCChHHHHhhhhcC-----C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~D~~d~~~~~~~~~~~-----~   72 (287)
                      |||++-||+++++.|+++|++|++.+|+.+...+...     ++.+.   ..++..+.+|++|+++++++++..     +
T Consensus        10 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~-----~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   84 (274)
T d1xhla_          10 TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQ-----QILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK   84 (274)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999998765321110     11110   246889999999999888877642     7


Q ss_pred             ccEEEecCCCCcc----------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           73 FDVVYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        73 ~d~vi~~a~~~~~----------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      +|++||+||....                      +    ++.++..+.  +..+++++||......           ..
T Consensus        85 iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~-----------~~  153 (274)
T d1xhla_          85 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA-----------HS  153 (274)
T ss_dssp             CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC-----------CT
T ss_pred             ceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcccc-----------CC
Confidence            8999999986311                      1    223333343  4557777777553211           11


Q ss_pred             CCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCC----C-ChhHHHHHHHHcC-CCccCCCCCCceeeee
Q 023110          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY----N-PVEEWFFHRLKAG-RPIPIPGSGIQVTQLG  190 (287)
Q Consensus       125 ~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~----~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i  190 (287)
                      ....| .+|...+.+.+       ..|+++..|.||.+-.|...    . ............. ..+++ +      -+.
T Consensus       154 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl-g------R~g  226 (274)
T d1xhla_         154 GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-G------HCG  226 (274)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-S------SCB
T ss_pred             CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC-C------CCc
Confidence            12235 88988876653       46899999999999765210    0 0011111111111 11221 1      234


Q ss_pred             eHHHHHHHHHHHHcCC---ccCCceEEecCCcc
Q 023110          191 HVKDLARAFVQVLGNE---KASRQVFNISGEKY  220 (287)
Q Consensus       191 ~~~D~a~~~~~~~~~~---~~~~~~~~i~~~~~  220 (287)
                      ..+|+|.+++.++..+   --.|+.+.+.++..
T Consensus       227 ~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         227 KPEEIANIIVFLADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             CHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             CHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence            6899999999988532   24789999999865

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.40  E-value=1.1e-11  Score=99.10  Aligned_cols=196  Identities=17%  Similarity=0.129  Sum_probs=125.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+.....+.+.    ..+.+....+.++++|+.|++++.+.++..     ++|+
T Consensus        24 TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~----~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   99 (272)
T d1g0oa_          24 TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVV----AAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI   99 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHH----HHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            7999999999999999999999999988654322211    122222457889999999998888877642     7899


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCCCCccEEEEecceeeccCCCCCCCCCCCCCCCcch-h
Q 023110           76 VYDINGREAD--------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (287)
                      ++|+++....                    +    .+.++..+....+.++++|.....          ........| .
T Consensus       100 lV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~----------~~~~~~~~Y~a  169 (272)
T d1g0oa_         100 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA----------KAVPKHAVYSG  169 (272)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC----------SSCSSCHHHHH
T ss_pred             cccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc----------ccccchhhHHH
Confidence            9999987421                    1    333444455445677776643211          011122334 8


Q ss_pred             hhHHHHHHhh-------hCCCcEEEEecCeeecCC----------C-CCChhHHHHH-HHHcCCCccCCCCCCceeeeee
Q 023110          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL----------N-YNPVEEWFFH-RLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~----------~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                      +|...+.+.+       ..|+++..|.||.+-.+.          . .......... ...+..++   +      -+..
T Consensus       170 sKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---g------R~~~  240 (272)
T d1g0oa_         170 SKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL---R------RVGL  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT---C------SCBC
T ss_pred             HHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC---C------CCcC
Confidence            8988877663       468999999999986541          0 0000111111 11112222   1      2466


Q ss_pred             HHHHHHHHHHHHcCCc--cCCceEEecCCc
Q 023110          192 VKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       192 ~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (287)
                      .+|+|.+++.++....  -+|+.+.+.++.
T Consensus       241 peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         241 PIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence            8999999999986432  378889988875

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.40  E-value=1.5e-12  Score=105.34  Aligned_cols=197  Identities=17%  Similarity=0.160  Sum_probs=125.8

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||++++++|+++|++|++.+|+.....+..+    ....+....+..+.+|+.+.+++.++++.     .++|+
T Consensus        31 TGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~----~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDi  106 (294)
T d1w6ua_          31 TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAE----QISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNI  106 (294)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH----HHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccch
Confidence            7999999999999999999999999999765332221    11112246788999999999888776653     27999


Q ss_pred             EEecCCCCccc--------------------HHHH----HHhC--C-CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           76 VYDINGREADE--------------------VEPI----LDAL--P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~~--------------------~~~l----l~~~--~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +||+++.....                    ...+    +..+  . ....++.+||.......          +....|
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~----------~~~~~Y  176 (294)
T d1w6ua_         107 VINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS----------GFVVPS  176 (294)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC----------TTCHHH
T ss_pred             hhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcc----------cccchH
Confidence            99999874211                    1111    1111  1 44556666665432211          111224


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCC--ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      ..+|...+.+.+       ..|+++..|.||.+-.+....  ...........+.-++.         -+...+|+|+++
T Consensus       177 sasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~v  247 (294)
T d1w6ua_         177 ASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG---------RLGTVEELANLA  247 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS---------SCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC---------CCCCHHHHHHHH
Confidence            488998887663       468999999999997764211  11112333333333332         244589999999


Q ss_pred             HHHHcCCc--cCCceEEecCCcc
Q 023110          200 VQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      ..++....  -+|+++.+.++..
T Consensus       248 ~fL~sd~s~~itG~~i~vDGG~~  270 (294)
T d1w6ua_         248 AFLCSDYASWINGAVIKFDGGEE  270 (294)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTHH
T ss_pred             HHHhCchhcCCCCcEEEECCChh
Confidence            99986432  4788999998864

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.38  E-value=1.7e-12  Score=101.63  Aligned_cols=173  Identities=14%  Similarity=0.140  Sum_probs=117.1

Q ss_pred             CCcccchHHHHHHHHHHcCCe-------EEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC--
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQ-------VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--   71 (287)
                      |||++-||+++++.|.++|++       |+..+|+.....+..     .++.+....+.++.+|++|+++++++++..  
T Consensus         7 TGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~-----~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           7 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKIS-----LECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHH-----HHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            799999999999999999987       888888876532111     111222356788999999999888777642  


Q ss_pred             ---CccEEEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCC
Q 023110           72 ---GFDVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (287)
Q Consensus        72 ---~~d~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (287)
                         ++|++||+||....                    +    ++.++..++  +..++|++||...+...+         
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~---------  152 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR---------  152 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCC---------
Confidence               79999999987421                    1    334555554  567899999977532111         


Q ss_pred             CCCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          123 VDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       123 ~~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                       ....|..+|...+.+.+       ..|+++..+.||.+-.+....               +   .+ .....+...+|+
T Consensus       153 -~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~---------------~---~~-~~~~~~~~Pedv  212 (240)
T d2bd0a1         153 -HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK---------------V---DD-EMQALMMMPEDI  212 (240)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC---------------C---CS-TTGGGSBCHHHH
T ss_pred             -CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh---------------c---CH-hhHhcCCCHHHH
Confidence             11123388988776553       468999999999986653110               0   00 011124568999


Q ss_pred             HHHHHHHHcCCc
Q 023110          196 ARAFVQVLGNEK  207 (287)
Q Consensus       196 a~~~~~~~~~~~  207 (287)
                      |++++.++..+.
T Consensus       213 A~~v~~l~s~~~  224 (240)
T d2bd0a1         213 AAPVVQAYLQPS  224 (240)
T ss_dssp             HHHHHHHHTSCT
T ss_pred             HHHHHHHHcCCc
Confidence            999999987654

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.36  E-value=1.7e-12  Score=103.75  Aligned_cols=198  Identities=15%  Similarity=0.154  Sum_probs=123.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh---hcCCeEEEEecCCChHHHHhhhhcC-----C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~D~~d~~~~~~~~~~~-----~   72 (287)
                      |||++-||+++++.|.++|++|++.+|+.+...+...     .+.+   ...++..+++|++|+++++++++..     +
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~-----~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   85 (272)
T d1xkqa_          11 TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQ-----IILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK   85 (272)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            8999999999999999999999999998765321110     0000   0246889999999999888877642     7


Q ss_pred             ccEEEecCCCCcc------------------------c----HHHHHHhCC-CCccEEEEec-ceeeccCCCCCCCCCCC
Q 023110           73 FDVVYDINGREAD------------------------E----VEPILDALP-NLEQFIYCSS-AGVYLKSDLLPHCETDT  122 (287)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~----~~~ll~~~~-~~~~~i~~Ss-~~v~~~~~~~~~~e~~~  122 (287)
                      +|++||+||....                        +    ++.++..++ +..++|.++| ......           
T Consensus        86 iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~-----------  154 (272)
T d1xkqa_          86 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA-----------  154 (272)
T ss_dssp             CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC-----------
T ss_pred             ceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccC-----------
Confidence            9999999987311                        1    222333333 3334555544 332211           


Q ss_pred             CCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCC----C-ChhHHHHHHHHc-CCCccCCCCCCceee
Q 023110          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY----N-PVEEWFFHRLKA-GRPIPIPGSGIQVTQ  188 (287)
Q Consensus       123 ~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~----~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~  188 (287)
                      ......| .+|...+.+.+       ..++++..|.||.+-.+...    . ............ ...+++ +      -
T Consensus       155 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-g------R  227 (272)
T d1xkqa_         155 QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-G------A  227 (272)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-S------S
T ss_pred             CCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC-C------C
Confidence            1112234 88998876653       46899999999998665210    0 011111111111 111211 1      2


Q ss_pred             eeeHHHHHHHHHHHHcCC---ccCCceEEecCCccc
Q 023110          189 LGHVKDLARAFVQVLGNE---KASRQVFNISGEKYV  221 (287)
Q Consensus       189 ~i~~~D~a~~~~~~~~~~---~~~~~~~~i~~~~~~  221 (287)
                      +...+|+|++++.++..+   --.|+.+.+.++..+
T Consensus       228 ~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         228 AGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence            456899999999998532   247899999998654

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.35  E-value=3.6e-12  Score=102.02  Aligned_cols=193  Identities=19%  Similarity=0.176  Sum_probs=124.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||++-||+++++.|.++|++|++.+|+.+...+.        ..+...++..+.+|+.+.++++++++.     ..+|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~--------~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_          11 TGGASGLGRALVDRFVAEGAKVAVLDKSAERLAEL--------ETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            79999999999999999999999999986653211        122246789999999999888877653     27999


Q ss_pred             EEecCCCCc-------------------------cc----HHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           76 VYDINGREA-------------------------DE----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        76 vi~~a~~~~-------------------------~~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      +||+||...                         .+    ++.++..++ +..++|++||...+-..          +..
T Consensus        83 lvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~----------~~~  152 (276)
T d1bdba_          83 LIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPN----------GGG  152 (276)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTT----------SSC
T ss_pred             ccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCC----------CCC
Confidence            999998621                         01    223344443 33578888876542111          111


Q ss_pred             CcchhhhHHHHHHhh------hCCCcEEEEecCeeecCCCCCC---------hhHHHHHHHHcCCCccCCCCCCceeeee
Q 023110          126 KSRHKGKLNTESVLE------SKGVNWTSLRPVYIYGPLNYNP---------VEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       126 ~~~~~~k~~~E~~~~------~~~~~~~ilR~~~v~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                      ..|..+|...+.+.+      ..++++..|.||.|-.+.....         ....+...+.+..++..         +.
T Consensus       153 ~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR---------~g  223 (276)
T d1bdba_         153 PLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGR---------MP  223 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSS---------CC
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCC---------Cc
Confidence            123488988776653      2359999999999865521100         01112222222222222         34


Q ss_pred             eHHHHHHHHHHHHcC---CccCCceEEecCCcc
Q 023110          191 HVKDLARAFVQVLGN---EKASRQVFNISGEKY  220 (287)
Q Consensus       191 ~~~D~a~~~~~~~~~---~~~~~~~~~i~~~~~  220 (287)
                      ..+|+|.+++.++..   .--+|+.+++.++-.
T Consensus       224 ~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~  256 (276)
T d1bdba_         224 EVEEYTGAYVFFATRGDAAPATGALLNYDGGLG  256 (276)
T ss_dssp             CGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGG
T ss_pred             CHHHHHHHHHHHcCCcccCCeeCcEEEECcChh
Confidence            479999999888753   234789999988743

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.32  E-value=1.2e-11  Score=98.11  Aligned_cols=182  Identities=16%  Similarity=0.106  Sum_probs=117.8

Q ss_pred             CCcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC----CccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~----~~d~   75 (287)
                      |||+|.||++++++|.++|+ +|+.++|+..... ...+ ...++......+.++.+|+.|.+++.++++..    +.|.
T Consensus        15 TGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~-~~~~-~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i~~   92 (259)
T d2fr1a1          15 TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDAD-GAGE-LVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSA   92 (259)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGST-THHH-HHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHH-HHHH-HHHHHHhccccccccccccchHHHHHHhhccccccccccc
Confidence            79999999999999999998 5777888743311 1100 00122222456899999999999998887743    5889


Q ss_pred             EEecCCCCc--------------------ccHHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhH
Q 023110           76 VYDINGREA--------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL  133 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~  133 (287)
                      |+|+++...                    .+..++.+++.  +..++|++||....-...+          ...|..+|.
T Consensus        93 vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~----------~~~YaAaka  162 (259)
T d2fr1a1          93 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG----------LGGYAPGNA  162 (259)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT----------CTTTHHHHH
T ss_pred             cccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcc----------cHHHHHHHH
Confidence            999998742                    22445666655  5678999999775422221          112448888


Q ss_pred             HHHHHh---hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCcc
Q 023110          134 NTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       134 ~~E~~~---~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (287)
                      ..+.+.   +..|++++.|.||.+.+++-    .....    . +.+..  .   -...+..+++++++..++.++..
T Consensus       163 ~l~~la~~~~~~Gi~v~~I~pg~~~~~g~----~~~~~----~-~~~~~--~---G~~~~~~~~~~~~l~~~l~~~~~  226 (259)
T d2fr1a1         163 YLDGLAQQRRSDGLPATAVAWGTWAGSGM----AEGPV----A-DRFRR--H---GVIEMPPETACRALQNALDRAEV  226 (259)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEECCBC---------------------CTT--T---TEECBCHHHHHHHHHHHHHTTCS
T ss_pred             hHHHHHHHHHhCCCCEEECCCCcccCCcc----ccchH----H-HHHHh--c---CCCCCCHHHHHHHHHHHHhCCCc
Confidence            877665   45789999999998876541    11000    0 11111  1   13457799999999999987654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=3.7e-12  Score=100.79  Aligned_cols=183  Identities=16%  Similarity=0.175  Sum_probs=114.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhh--hcCCeEEEEecCCChHHHHhhhhcC-----Cc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~D~~d~~~~~~~~~~~-----~~   73 (287)
                      |||++-||.++++.|.++|++|++.+|+.....+...     ++..  ....+..+++|+.++++++++++..     ++
T Consensus        16 TGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~-----~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~i   90 (257)
T d1xg5a_          16 TGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAA-----ECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV   90 (257)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999998765322111     1111  1246788999999999888877642     79


Q ss_pred             cEEEecCCCCcc--------------------c----HHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREAD--------------------E----VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~--------------------~----~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |++||+|+....                    +    ++.++..+.    ...++|++||..-+...         +...
T Consensus        91 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~---------p~~~  161 (257)
T d1xg5a_          91 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL---------PLSV  161 (257)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC---------SCGG
T ss_pred             CEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC---------CCcc
Confidence            999999987421                    1    223343332    24689999997642111         1111


Q ss_pred             Cc-chhhhHHHHHHhh---------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHH
Q 023110          126 KS-RHKGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       126 ~~-~~~~k~~~E~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (287)
                      .. |..+|..++.+.+         ..++++..|-||.+-.+... .............  .+       ...++..+|+
T Consensus       162 ~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~-~~~~~~~~~~~~~--~~-------~~r~~~pedv  231 (257)
T d1xg5a_         162 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF-KLHDKDPEKAAAT--YE-------QMKCLKPEDV  231 (257)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH-HHTTTCHHHHHHH--HC----------CBCHHHH
T ss_pred             cHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhh-hcChhhHHHHHhc--CC-------CCCCcCHHHH
Confidence            12 3388887776542         35789999999877544200 0000001111111  11       1235679999


Q ss_pred             HHHHHHHHcCCc
Q 023110          196 ARAFVQVLGNEK  207 (287)
Q Consensus       196 a~~~~~~~~~~~  207 (287)
                      |++++.++..+.
T Consensus       232 A~~v~fL~s~~a  243 (257)
T d1xg5a_         232 AEAVIYVLSTPA  243 (257)
T ss_dssp             HHHHHHHHHSCT
T ss_pred             HHHHHHHhCChh
Confidence            999999987653

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=5.3e-12  Score=98.90  Aligned_cols=171  Identities=15%  Similarity=0.153  Sum_probs=115.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||++-||++++++|.++|++|++.+|+.+...+..     .+......++..+.+|++|.+++..+++.     -.+|+
T Consensus        13 TGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~-----~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idi   87 (244)
T d1yb1a_          13 TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA-----AKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI   87 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCce
Confidence            799999999999999999999999999876532211     11222346789999999999988877753     26999


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcch
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (287)
                      +||+||....                    +    ++.++..+.  +..++|++||...+...           .....|
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~-----------~~~~~Y  156 (244)
T d1yb1a_          88 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV-----------PFLLAY  156 (244)
T ss_dssp             EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH-----------HHHHHH
T ss_pred             eEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCC-----------CCcHHH
Confidence            9999998421                    1    233444443  55689999997763211           111234


Q ss_pred             -hhhHHHHHHhh-------h---CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          130 -KGKLNTESVLE-------S---KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       130 -~~k~~~E~~~~-------~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                       .+|...+.+.+       .   .|+++..+.||.+-.+.....             ..       .....+..+|+|+.
T Consensus       157 ~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~-------------~~-------~~~~~~~pe~va~~  216 (244)
T d1yb1a_         157 CSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-------------ST-------SLGPTLEPEEVVNR  216 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-------------HH-------HHCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc-------------Cc-------cccCCCCHHHHHHH
Confidence             88888776542       1   368999999998755421110             00       01123457899999


Q ss_pred             HHHHHcCCc
Q 023110          199 FVQVLGNEK  207 (287)
Q Consensus       199 ~~~~~~~~~  207 (287)
                      +...+..++
T Consensus       217 i~~~~~~~~  225 (244)
T d1yb1a_         217 LMHGILTEQ  225 (244)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHhcCC
Confidence            888876654

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.27  E-value=4.6e-11  Score=94.16  Aligned_cols=192  Identities=18%  Similarity=0.086  Sum_probs=122.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCC-ChHHHHhhhhc-----CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~-d~~~~~~~~~~-----~~~d   74 (287)
                      |||++-||.+++++|+++|.+|+++.|+.+.... +.+   ........++.++.+|+. +.+++++++++     -++|
T Consensus        11 TGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~-~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iD   86 (254)
T d1sbya1          11 VAALGGIGLDTSRELVKRNLKNFVILDRVENPTA-LAE---LKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVD   86 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHH-HHH---HHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCC
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHH-HHH---HHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999988765221 110   001111347889999997 55556555543     2799


Q ss_pred             EEEecCCCCcc------------c----HHHHHHhCC-----CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhH
Q 023110           75 VVYDINGREAD------------E----VEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL  133 (287)
Q Consensus        75 ~vi~~a~~~~~------------~----~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~  133 (287)
                      ++||+||....            +    ++.++..+.     ...++|++||...+...          +....|..+|.
T Consensus        87 ilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~----------~~~~~Y~asKa  156 (254)
T d1sbya1          87 ILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI----------HQVPVYSASKA  156 (254)
T ss_dssp             EEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC----------TTSHHHHHHHH
T ss_pred             EEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC----------CCCHHHHHHHH
Confidence            99999997421            2    333444443     23579999987753211          11122448888


Q ss_pred             HHHHHh-------hhCCCcEEEEecCeeecCC--CCCCh--hHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHH
Q 023110          134 NTESVL-------ESKGVNWTSLRPVYIYGPL--NYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       134 ~~E~~~-------~~~~~~~~ilR~~~v~g~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (287)
                      ....+.       ...++++..|.||.+..+-  .....  ....+.....            .+.....+++|++++..
T Consensus       157 al~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~va~~~~~~  224 (254)
T d1sbya1         157 AVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL------------SHPTQTSEQCGQNFVKA  224 (254)
T ss_dssp             HHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT------------TSCCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccc------------cCCCCCHHHHHHHHHHh
Confidence            877654       2468999999999997651  00000  0000001000            12344689999999988


Q ss_pred             HcCCccCCceEEecCCc
Q 023110          203 LGNEKASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~~~~~~~~~i~~~~  219 (287)
                      ++... +|+++.+.++.
T Consensus       225 ~~~~~-tG~vi~vdgG~  240 (254)
T d1sbya1         225 IEANK-NGAIWKLDLGT  240 (254)
T ss_dssp             HHHCC-TTCEEEEETTE
T ss_pred             hhCCC-CCCEEEECCCE
Confidence            87665 78899988874

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.23  E-value=1.8e-10  Score=91.18  Aligned_cols=196  Identities=14%  Similarity=0.099  Sum_probs=124.8

Q ss_pred             CCccc--chHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCc
Q 023110            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~   73 (287)
                      |||+|  -||+++++.|+++|++|++.+|+.... +..     .+..........++.|..+..+....+..     ...
T Consensus        11 TGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (258)
T d1qsga_          11 TGVASKLSIAYGIAQAMHREGAELAFTYQNDKLK-GRV-----EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF   84 (258)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTH-HHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred             ECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHH-HHH-----HHHHhhcCCcceeecccchHHHHHHHHHHhhhccccc
Confidence            79998  799999999999999999999985431 111     11122235677888899887766655542     268


Q ss_pred             cEEEecCCCCccc-------------------------HHHHHHhCC----CCccEEEEecceeeccCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREADE-------------------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        74 d~vi~~a~~~~~~-------------------------~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (287)
                      |.+||+++.....                         ...+..++.    +...+|++||.......          +.
T Consensus        85 d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~----------~~  154 (258)
T d1qsga_          85 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI----------PN  154 (258)
T ss_dssp             EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC----------TT
T ss_pred             ceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCC----------CC
Confidence            9999998774211                         122333322    33568888886642111          11


Q ss_pred             CCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCC-hhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHH
Q 023110          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       125 ~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (287)
                      ...|..+|...+.+.+       ..++++..|+||.|..+..... ..........+..++.         -+...+|+|
T Consensus       155 ~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~peeia  225 (258)
T d1qsga_         155 YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR---------RTVTIEDVG  225 (258)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS---------SCCCHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCC---------CCcCHHHHH
Confidence            1223489998887764       4689999999999987753221 1222333333322321         134589999


Q ss_pred             HHHHHHHcCC--ccCCceEEecCCccc
Q 023110          197 RAFVQVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (287)
                      .++..++...  --+|+++.+.++..+
T Consensus       226 ~~v~fL~s~~s~~itG~~i~vDGG~~i  252 (258)
T d1qsga_         226 NSAAFLCSDLSAGISGEVVHVDGGFSI  252 (258)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCchhcCccCceEEECcCHHH
Confidence            9999998543  247889999998654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=4.3e-11  Score=96.00  Aligned_cols=144  Identities=16%  Similarity=0.093  Sum_probs=96.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEc---CCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC---Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR---GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~---~~d   74 (287)
                      |||++-||+++++.|.++|.+|+.+.+   +.... ..+.+. ...+.....++..+.+|++|.+++.++++..   ..|
T Consensus         8 TGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~-~~l~~~-~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~id   85 (285)
T d1jtva_           8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQ-GRLWEA-ARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVD   85 (285)
T ss_dssp             SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGT-HHHHHH-HHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCCS
T ss_pred             ccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhh-HHHHHH-HHHHhccCCceEEEeccccchHhhhhhhhhccccchh
Confidence            899999999999999999987666554   32221 000000 0000111357899999999999998887643   699


Q ss_pred             EEEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      +++|+++....                    +    ++.++..+.  +..++|++||....-.           ......
T Consensus        86 ilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~-----------~~~~~~  154 (285)
T d1jtva_          86 VLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG-----------LPFNDV  154 (285)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC-----------CTTCHH
T ss_pred             hhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCC-----------CCCchH
Confidence            99999987321                    1    333444444  5679999999765321           111223


Q ss_pred             h-hhhHHHHHHhh-------hCCCcEEEEecCeeecC
Q 023110          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~  157 (287)
                      | .+|...+.+.+       ..|+++..|.||.+-.+
T Consensus       155 Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~  191 (285)
T d1jtva_         155 YCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA  191 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCCh
Confidence            5 89998877653       46899999999998655

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.19  E-value=6.4e-11  Score=95.64  Aligned_cols=207  Identities=13%  Similarity=0.089  Sum_probs=128.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCC-CChhhhhhhcCCeEEEEecCCChHHHHhhhhc----C-Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K-GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~----~-~~d   74 (287)
                      |||++-||+++++.|.++|++|++.+|+.+.....-.. ..+....+.......+.+|+.|.++.+++++.    . ++|
T Consensus        13 TGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~G~iD   92 (302)
T d1gz6a_          13 TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRID   92 (302)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHTSCCC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHcCCCC
Confidence            89999999999999999999999999876542111110 01111122233455677888887666655542    2 799


Q ss_pred             EEEecCCCCcc--------------------c----HHHHHHhCC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      ++||+||....                    +    ++.++..++  +..++|++||...+-...+          ...|
T Consensus        93 iLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~----------~~~Y  162 (302)
T d1gz6a_          93 VVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG----------QANY  162 (302)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----------CHHH
T ss_pred             EEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCC----------cHHH
Confidence            99999998421                    1    333444444  5579999999775422111          1224


Q ss_pred             hhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       129 ~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      ..+|...+.+.+       ..|+++..|.||.+-.+.. ..+..                   .....+..+|+|.+++.
T Consensus       163 ~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~-~~~~~-------------------~~~~~~~PedvA~~v~f  222 (302)
T d1gz6a_         163 SAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTE-TVMPE-------------------DLVEALKPEYVAPLVLW  222 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTG-GGSCH-------------------HHHHHSCGGGTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchh-hcCcH-------------------hhHhcCCHHHHHHHHHH
Confidence            489998876653       4689999999986532211 00000                   11123346899999998


Q ss_pred             HHcCC-ccCCceEEecCC-------------------cccCHHHHHHHHHHHhCCC
Q 023110          202 VLGNE-KASRQVFNISGE-------------------KYVTFDGLARACAKAAGFP  237 (287)
Q Consensus       202 ~~~~~-~~~~~~~~i~~~-------------------~~~s~~e~~~~i~~~~g~~  237 (287)
                      ++... ..+|+++.+.++                   .+.|..++.+.+.+....+
T Consensus       223 L~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~  278 (302)
T d1gz6a_         223 LCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFS  278 (302)
T ss_dssp             HTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCT
T ss_pred             HcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCcc
Confidence            87532 235666666543                   3356777777777766543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.16  E-value=5.8e-10  Score=87.12  Aligned_cols=184  Identities=16%  Similarity=0.184  Sum_probs=117.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhh----cCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----AKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----~~~~d~v   76 (287)
                      |||++.||+++++.|.++|++|++.+|+.+.                 .+...+++|+.+......+..    ....+.+
T Consensus         7 TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-----------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~   69 (241)
T d1uaya_           7 TGGASGLGRAAALALKARGYRVVVLDLRREG-----------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   69 (241)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCccc-----------------ccceEeeccccchhhhHHHHHhhhccccccch
Confidence            7999999999999999999999999998654                 355678899988665554443    2244555


Q ss_pred             EecCCCCcc------------------------c----HHHHHHhC------C--CCccEEEEecceeeccCCCCCCCCC
Q 023110           77 YDINGREAD------------------------E----VEPILDAL------P--NLEQFIYCSSAGVYLKSDLLPHCET  120 (287)
Q Consensus        77 i~~a~~~~~------------------------~----~~~ll~~~------~--~~~~~i~~Ss~~v~~~~~~~~~~e~  120 (287)
                      ++.++....                        .    ++.++..+      .  +..++|++||...+....       
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~-------  142 (241)
T d1uaya_          70 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI-------  142 (241)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-------
T ss_pred             hhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC-------
Confidence            555443100                        0    11222221      1  345899999977643211       


Q ss_pred             CCCCCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHH
Q 023110          121 DTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       121 ~~~~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                         ....|..+|...+.+.+       .+|+++..|.||.+..+.... .............++  .+      -+...+
T Consensus       143 ---~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~-~~~~~~~~~~~~~~~--~~------R~g~pe  210 (241)
T d1uaya_         143 ---GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVPF--PP------RLGRPE  210 (241)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-SCHHHHHHHHTTCCS--SC------SCCCHH
T ss_pred             ---CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccch-hhhhHHHHHHhcCCC--CC------CCcCHH
Confidence               11224489998887653       468999999999986653111 112222233332221  11      134589


Q ss_pred             HHHHHHHHHHcCCccCCceEEecCCcc
Q 023110          194 DLARAFVQVLGNEKASRQVFNISGEKY  220 (287)
Q Consensus       194 D~a~~~~~~~~~~~~~~~~~~i~~~~~  220 (287)
                      |+|.+++.++...--.|+.+.+.++-.
T Consensus       211 dvA~~v~fL~s~~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         211 EYAALVLHILENPMLNGEVVRLDGALR  237 (241)
T ss_dssp             HHHHHHHHHHHCTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHHhCCCCCCCEEEECCccc
Confidence            999999999876555788999988753

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=8.7e-10  Score=86.56  Aligned_cols=187  Identities=16%  Similarity=0.193  Sum_probs=116.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      |||++.||++++++|.++|++|++.+|+.+...+.        ..+..........|+.+.+.+......     ...|.
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (248)
T d2o23a1          11 TGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ--------AKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   82 (248)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH--------HHHhCCCcccccccccccccccccccccccccccccc
Confidence            79999999999999999999999999997663221        222346788889999887666544432     26788


Q ss_pred             EEecCCCCcc--------------------------c----HHHHHHhCC--------CCccEEEEecceeeccCCCCCC
Q 023110           76 VYDINGREAD--------------------------E----VEPILDALP--------NLEQFIYCSSAGVYLKSDLLPH  117 (287)
Q Consensus        76 vi~~a~~~~~--------------------------~----~~~ll~~~~--------~~~~~i~~Ss~~v~~~~~~~~~  117 (287)
                      ++++++.+..                          +    ++.++..+.        +..++|++||...+....    
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~----  158 (248)
T d2o23a1          83 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV----  158 (248)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT----
T ss_pred             cccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCC----
Confidence            8877654211                          1    122222221        224799999987642211    


Q ss_pred             CCCCCCCCCcch-hhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeee
Q 023110          118 CETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       118 ~e~~~~~~~~~~-~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                             ....| .+|...+.+.+       ..++++..|.||.+..+.... +.........+..+  +.+      -+
T Consensus       159 -------~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~p--l~~------R~  222 (248)
T d2o23a1         159 -------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQVP--FPS------RL  222 (248)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCS--SSC------SC
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhc-CCHHHHHHHHhcCC--CCC------CC
Confidence                   12234 99998887663       468999999999987663211 11112222222211  111      14


Q ss_pred             eeHHHHHHHHHHHHcCCccCCceEEe
Q 023110          190 GHVKDLARAFVQVLGNEKASRQVFNI  215 (287)
Q Consensus       190 i~~~D~a~~~~~~~~~~~~~~~~~~i  215 (287)
                      ...+|+|++++.+++..--+|++.+|
T Consensus       223 g~peevA~~v~fL~s~~~itGq~I~v  248 (248)
T d2o23a1         223 GDPAEYAHLVQAIIENPFLNGEVIRL  248 (248)
T ss_dssp             BCHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred             cCHHHHHHHHHHHHhCCCCCceEeEC
Confidence            56899999999988765446666554

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=2.4e-11  Score=96.26  Aligned_cols=190  Identities=16%  Similarity=0.107  Sum_probs=116.8

Q ss_pred             CCcccchHHHHHHHHHH---cCCeEEEEEcCCccccccCCCCChhhhhh--hcCCeEEEEecCCChHHHHhhhhc-----
Q 023110            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSA-----   70 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~D~~d~~~~~~~~~~-----   70 (287)
                      |||++.||++++++|.+   +|++|++.+|+.+...+...     ++..  ...++.++.+|+.++++++++++.     
T Consensus        12 TGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~-----~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~   86 (259)
T d1oaaa_          12 TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKE-----ELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP   86 (259)
T ss_dssp             SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHH-----HHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred             eCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHH-----HHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhh
Confidence            89999999999999986   69999999998765321111     1111  123688899999999888877642     


Q ss_pred             ----CCccEEEecCCCCc-----------------------cc----HHHHHHhCC--C--CccEEEEecceeeccCCCC
Q 023110           71 ----KGFDVVYDINGREA-----------------------DE----VEPILDALP--N--LEQFIYCSSAGVYLKSDLL  115 (287)
Q Consensus        71 ----~~~d~vi~~a~~~~-----------------------~~----~~~ll~~~~--~--~~~~i~~Ss~~v~~~~~~~  115 (287)
                          ...|+++|++|...                       .+    ++.++..++  +  ..++|++||...+..    
T Consensus        87 ~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~----  162 (259)
T d1oaaa_          87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP----  162 (259)
T ss_dssp             CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC----
T ss_pred             hhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC----
Confidence                25678999987521                       11    233444554  2  358999999765321    


Q ss_pred             CCCCCCCCCCCcch-hhhHHHHHHhh-----hCCCcEEEEecCeeecCCCCC----ChhHHHHHHHHcCCCccCCCCCCc
Q 023110          116 PHCETDTVDPKSRH-KGKLNTESVLE-----SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQ  185 (287)
Q Consensus       116 ~~~e~~~~~~~~~~-~~k~~~E~~~~-----~~~~~~~ilR~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  185 (287)
                             ......| .+|..++.+.+     ..++++..|.||.+-.+....    ...+..........+.   +    
T Consensus       163 -------~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~---~----  228 (259)
T d1oaaa_         163 -------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD---G----  228 (259)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHT---T----
T ss_pred             -------CccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCC---C----
Confidence                   1112234 88998876653     468999999999886652000    0000111111110011   1    


Q ss_pred             eeeeeeHHHHHHHHHHHHcCCc-cCCceEEe
Q 023110          186 VTQLGHVKDLARAFVQVLGNEK-ASRQVFNI  215 (287)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~i  215 (287)
                        -+...+|+|++++.++.... ..|+.+++
T Consensus       229 --r~~~p~evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         229 --ALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             --CSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             --CCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence              23568999999999886432 35665554

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.13  E-value=3e-10  Score=88.50  Aligned_cols=173  Identities=14%  Similarity=0.127  Sum_probs=107.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHH-------HhhhhcCCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-------KSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~-------~~~~~~~~~   73 (287)
                      |||+|-||++++++|.++|++|++++|+.....               .....+.+|..+.+..       ...++..++
T Consensus         8 TGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i   72 (235)
T d1ooea_           8 YGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   72 (235)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc---------------cccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence            799999999999999999999999999876421               2223344555443322       222222368


Q ss_pred             cEEEecCCCCcc---------------------c----HHHHHHhCCCCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           74 DVVYDINGREAD---------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        74 d~vi~~a~~~~~---------------------~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |++||+||....                     +    .+.++..+++..++|++||...+....           ....
T Consensus        73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~-----------~~~~  141 (235)
T d1ooea_          73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP-----------SMIG  141 (235)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-----------TBHH
T ss_pred             eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcc-----------cccc
Confidence            999999986311                     1    122333344336899999976532111           1223


Q ss_pred             h-hhhHHHHHHhhh---------CCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          129 H-KGKLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~-~~k~~~E~~~~~---------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      | .+|...+.+.+.         .++++..+.||.+-.+         +.+......         ....++..+|+++.
T Consensus       142 Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~---------~~~~~~~~~---------~~~~~~~~~~va~~  203 (235)
T d1ooea_         142 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP---------MNRKWMPNA---------DHSSWTPLSFISEH  203 (235)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH---------HHHHHSTTC---------CGGGCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc---------chhhhCcCC---------ccccCCCHHHHHHH
Confidence            5 999998877631         3567888899877443         222222111         12246779999999


Q ss_pred             HHHHHcCCc---cCCceEEecC
Q 023110          199 FVQVLGNEK---ASRQVFNISG  217 (287)
Q Consensus       199 ~~~~~~~~~---~~~~~~~i~~  217 (287)
                      ++.++..+.   ..|..+.+.+
T Consensus       204 ~~~~l~~~~~~~~tG~~i~v~~  225 (235)
T d1ooea_         204 LLKWTTETSSRPSSGALLKITT  225 (235)
T ss_dssp             HHHHHHCGGGCCCTTCEEEEEE
T ss_pred             HHHHhcCccccCCCceEEEEEe
Confidence            887765532   3566776643

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.09  E-value=5e-10  Score=87.24  Aligned_cols=173  Identities=12%  Similarity=0.075  Sum_probs=108.6

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHH-------hhhhcCCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK-------SSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~-------~~~~~~~~   73 (287)
                      |||+|.||+++++.|.++|++|++++++.....               .....+..|..+.+...       +.+...++
T Consensus         8 TGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   72 (236)
T d1dhra_           8 YGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   72 (236)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------cccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence            799999999999999999999999998765421               22233444444433332       22222368


Q ss_pred             cEEEecCCCCcc---------------------c----HHHHHHhCCCCccEEEEecceeeccCCCCCCCCCCCCCCCcc
Q 023110           74 DVVYDINGREAD---------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        74 d~vi~~a~~~~~---------------------~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (287)
                      |++||+||....                     +    ++.++..+++..++|++||...+....          ....|
T Consensus        73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~----------~~~~Y  142 (236)
T d1dhra_          73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP----------GMIGY  142 (236)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT----------TBHHH
T ss_pred             eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCcc----------CCccc
Confidence            999999985210                     0    222333344446899999976532111          11223


Q ss_pred             hhhhHHHHHHhh---------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHH
Q 023110          129 HKGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~~~k~~~E~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (287)
                      ..+|..++.+.+         ..++++..+.||.+..|.         .+......         ..-.++..+++|+.+
T Consensus       143 ~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~---------~~~~~~~~---------~~~~~~~pe~va~~~  204 (236)
T d1dhra_         143 GMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM---------NRKSMPEA---------DFSSWTPLEFLVETF  204 (236)
T ss_dssp             HHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH---------HHHHSTTS---------CGGGSEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc---------chhhCccc---------hhhcCCCHHHHHHHH
Confidence            499998887763         247899999999887651         11211111         112457789999999


Q ss_pred             HHHHcCCc--cCCceEEec
Q 023110          200 VQVLGNEK--ASRQVFNIS  216 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~  216 (287)
                      ..++....  .+|..+.+.
T Consensus       205 ~~l~s~~~~~i~G~~i~v~  223 (236)
T d1dhra_         205 HDWITGNKRPNSGSLIQVV  223 (236)
T ss_dssp             HHHHTTTTCCCTTCEEEEE
T ss_pred             HHHhCCCccCCCCCeEEEE
Confidence            99886543  366666553

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.09  E-value=2.2e-09  Score=85.01  Aligned_cols=198  Identities=15%  Similarity=0.132  Sum_probs=117.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC----hHHHHhhhhc-----C
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLSA-----K   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d----~~~~~~~~~~-----~   71 (287)
                      |||++-||+++++.|+++|++|++.+|+.+...+.+.+   ............++.|..+    .+.+.++++.     -
T Consensus         7 TGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   83 (266)
T d1mxha_           7 TGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVA---ELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFG   83 (266)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH---HHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHH---HHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHhC
Confidence            89999999999999999999999999997653222110   1111113456667766654    2333333321     2


Q ss_pred             CccEEEecCCCCccc-----------------------------------HHHHHHhCC-------CCccEEEEecceee
Q 023110           72 GFDVVYDINGREADE-----------------------------------VEPILDALP-------NLEQFIYCSSAGVY  109 (287)
Q Consensus        72 ~~d~vi~~a~~~~~~-----------------------------------~~~ll~~~~-------~~~~~i~~Ss~~v~  109 (287)
                      ++|++||+||.....                                   .......+.       ....++.+|+....
T Consensus        84 ~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (266)
T d1mxha_          84 RCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTD  163 (266)
T ss_dssp             CCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGG
T ss_pred             CCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcccc
Confidence            799999999863110                                   000111111       12344455544331


Q ss_pred             ccCCCCCCCCCCCCCCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCC
Q 023110          110 LKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGS  182 (287)
Q Consensus       110 ~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (287)
                      ..          .+....|..+|...+.+.+       ..|+++..|.||.+..+...   .......+.+.-++   +.
T Consensus       164 ~~----------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~---~~~~~~~~~~~~pl---~r  227 (266)
T d1mxha_         164 LP----------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM---PQETQEEYRRKVPL---GQ  227 (266)
T ss_dssp             SC----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS---CHHHHHHHHTTCTT---TS
T ss_pred             cc----------CcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC---CHHHHHHHHhcCCC---CC
Confidence            11          1111123378998887653       46899999999998766422   22333444443322   11


Q ss_pred             CCceeeeeeHHHHHHHHHHHHcCCc--cCCceEEecCCcccC
Q 023110          183 GIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       183 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                           -+...+|+|.+++.++....  -+|+.+.+.++..++
T Consensus       228 -----~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l~  264 (266)
T d1mxha_         228 -----SEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILA  264 (266)
T ss_dssp             -----CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             -----CCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhhh
Confidence                 23468999999999996532  378899999987543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.08  E-value=1.4e-09  Score=86.73  Aligned_cols=195  Identities=12%  Similarity=0.071  Sum_probs=120.6

Q ss_pred             CCccc--chHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCc
Q 023110            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~   73 (287)
                      |||+|  -||.++++.|+++|++|++.+|+... .+..     .++........++.+|+.+.++..++++.     ..+
T Consensus        11 TGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~-~~~~-----~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~i   84 (274)
T d2pd4a1          11 VGVANNKSIAYGIAQSCFNQGATLAFTYLNESL-EKRV-----RPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL   84 (274)
T ss_dssp             ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT-HHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred             ECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHH-----HHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCC
Confidence            68877  69999999999999999999998542 1111     11122235677889999998777766642     279


Q ss_pred             cEEEecCCCCccc------------------------HHHHHHh-CC---CCccEEEEecceeeccCCCCCCCCCCCCCC
Q 023110           74 DVVYDINGREADE------------------------VEPILDA-LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~~------------------------~~~ll~~-~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (287)
                      |++||+++.....                        ....... ..   ....++..|+.......          ...
T Consensus        85 d~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~----------~~~  154 (274)
T d2pd4a1          85 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM----------AHY  154 (274)
T ss_dssp             EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC----------TTC
T ss_pred             CeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc----------ccc
Confidence            9999999874211                        1111111 11   22345555554432211          111


Q ss_pred             CcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChh-HHHHHHHHcCCCccCCCCCCceeeeeeHHHHHH
Q 023110          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       126 ~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (287)
                      ..|..+|...+.+.+       ..|+++..+.||.+..+....... ...........+..         -+...+|+|.
T Consensus       155 ~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~---------r~~~pedIA~  225 (274)
T d2pd4a1         155 NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLR---------KNVSLEEVGN  225 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS---------SCCCHHHHHH
T ss_pred             hhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhcc---------CCcCHHHHHH
Confidence            223378888877653       468999999999987764221111 22222222222221         2456999999


Q ss_pred             HHHHHHcCCc--cCCceEEecCCcc
Q 023110          198 AFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~  220 (287)
                      ++..++....  -+|+.+.+.++..
T Consensus       226 ~v~fL~S~~s~~itG~~i~vDGG~~  250 (274)
T d2pd4a1         226 AGMYLLSSLSSGVSGEVHFVDAGYH  250 (274)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhChhhCCCcCceEEECCChh
Confidence            9999986532  4788999999874

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.06  E-value=2.4e-09  Score=85.69  Aligned_cols=197  Identities=11%  Similarity=0.031  Sum_probs=116.1

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhh-hhcCC-----------------eEEEEecCCChH
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSK-----------------ILHLKGDRKDYD   62 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~-----------------~~~i~~D~~d~~   62 (287)
                      |||++-||+++++.|.++|++|++.+|+.....+.+.+    .+. .....                 +....+|+++.+
T Consensus         8 TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~   83 (284)
T d1e7wa_           8 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSA----TLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   83 (284)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH----HHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHH----HHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence            89999999999999999999999988876442211110    000 00122                 333456677777


Q ss_pred             HHHhhhhc-----CCccEEEecCCCCccc----------------------------------HHHHHHh----------
Q 023110           63 FVKSSLSA-----KGFDVVYDINGREADE----------------------------------VEPILDA----------   93 (287)
Q Consensus        63 ~~~~~~~~-----~~~d~vi~~a~~~~~~----------------------------------~~~ll~~----------   93 (287)
                      +++++++.     -++|++||+||.....                                  ...+.++          
T Consensus        84 ~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  163 (284)
T d1e7wa_          84 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA  163 (284)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCG
T ss_pred             HHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHH
Confidence            77776643     2799999999874210                                  0001111          


Q ss_pred             CC--CCccEEEEecceeeccCCCCCCCCCCCCCCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChh
Q 023110           94 LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE  164 (287)
Q Consensus        94 ~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~  164 (287)
                      ..  +..++|.++|......          ......|..+|...+.+.+       ..|+++..|.||.+-...   ...
T Consensus       164 ~~~~~~~~ii~~~s~~~~~~----------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~---~~~  230 (284)
T d1e7wa_         164 KHRGTNYSIINMVDAMTNQP----------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD---DMP  230 (284)
T ss_dssp             GGSCSCEEEEEECCTTTTSC----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG---GSC
T ss_pred             HhcCCCCcccccccccccCC----------ccceeeeccccccchhhhHHHHHHhCCccccccccccccccccc---cCC
Confidence            11  2345666666443211          0111223488998887653       468999999998642221   122


Q ss_pred             HHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCCc--cCCceEEecCCcccC
Q 023110          165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (287)
                      ...........++  .+      -+...+|+|.+++.++....  -+|+.+.+.++..+|
T Consensus       231 ~~~~~~~~~~~pl--~~------R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         231 PAVWEGHRSKVPL--YQ------RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             HHHHHHHHTTCTT--TT------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHhcCCC--CC------CCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            3344444443221  11      13458999999999986432  378899999987665

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.04  E-value=3.7e-09  Score=82.95  Aligned_cols=183  Identities=16%  Similarity=0.136  Sum_probs=107.5

Q ss_pred             CCcccchHHHHHHHHHHcCC--eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-------C
Q 023110            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K   71 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-------~   71 (287)
                      |||++-||.+++++|+++|+  .|++.+|+.+...+ +.+       ....++.++.+|+.+.++++++++.       .
T Consensus         9 TGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~-l~~-------~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           9 TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-LKS-------IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH-HHT-------CCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             eCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHH-HHH-------hhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            89999999999999999985  68888998765321 111       1135789999999998887766542       2


Q ss_pred             CccEEEecCCCCc---------------------cc----HHHHHHhCC-------------CCccEEEEecceeeccCC
Q 023110           72 GFDVVYDINGREA---------------------DE----VEPILDALP-------------NLEQFIYCSSAGVYLKSD  113 (287)
Q Consensus        72 ~~d~vi~~a~~~~---------------------~~----~~~ll~~~~-------------~~~~~i~~Ss~~v~~~~~  113 (287)
                      ++|++||+||...                     .+    ++.++..++             ...+++.+|+...+-...
T Consensus        81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~  160 (250)
T d1yo6a1          81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence            4899999999631                     11    122222221             123566666654432111


Q ss_pred             CCCCCCCCCCCCC-cchhhhHHHHHHh-------hhCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCc
Q 023110          114 LLPHCETDTVDPK-SRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (287)
Q Consensus       114 ~~~~~e~~~~~~~-~~~~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (287)
                      .   .. ....+. .|..+|.....+.       +..++++..+.||.|-.+-     .         +.          
T Consensus       161 ~---~~-~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m-----~---------~~----------  212 (250)
T d1yo6a1         161 T---SG-SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL-----G---------GK----------  212 (250)
T ss_dssp             C---ST-TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred             c---cc-ccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCC-----C---------CC----------
Confidence            1   00 111122 2448898876554       3568999999999874431     0         00          


Q ss_pred             eeeeeeHHHHHHHHHHHHcCCc--cCCceEEecCCccc
Q 023110          186 VTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (287)
                       ...+..++.++.++..+....  ..|+.|+ .++.++
T Consensus       213 -~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~-~~g~p~  248 (250)
T d1yo6a1         213 -NAALTVEQSTAELISSFNKLDNSHNGRFFM-RNLKPY  248 (250)
T ss_dssp             -------HHHHHHHHHHHTTCCGGGTTCEEE-TTEEEC
T ss_pred             -CCCCCHHHHHHHHHHHHhcCCCCCCeEEEC-CCCeeC
Confidence             012456888888888886532  2455443 344443

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.01  E-value=2.3e-09  Score=84.00  Aligned_cols=143  Identities=18%  Similarity=0.199  Sum_probs=95.0

Q ss_pred             CCcccchHHHHHHHHHH---cCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-------
Q 023110            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------   70 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-------   70 (287)
                      |||++-||++++++|++   +|++|++.+|+.+... .+.     .+.....++.++.+|+.|+++++++++.       
T Consensus         8 TGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~-~~~-----~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           8 TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELE-----DLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH-HHH-----HHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             eCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHH-HHH-----HHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            89999999999999985   6999999999977632 111     1122246899999999998888766552       


Q ss_pred             CCccEEEecCCCCcc---------------------c----HHHHHHhCC-------------CCccEEEEecceeeccC
Q 023110           71 KGFDVVYDINGREAD---------------------E----VEPILDALP-------------NLEQFIYCSSAGVYLKS  112 (287)
Q Consensus        71 ~~~d~vi~~a~~~~~---------------------~----~~~ll~~~~-------------~~~~~i~~Ss~~v~~~~  112 (287)
                      .++|++||+||....                     +    ++.++..++             +..++|.+||..-.  .
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~--~  159 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS--I  159 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC--S
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc--c
Confidence            269999999987311                     1    122222221             24678999885431  1


Q ss_pred             CCCCCCCCCCCCCC-cchhhhHHHHHHh-------hhCCCcEEEEecCeeecC
Q 023110          113 DLLPHCETDTVDPK-SRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       113 ~~~~~~e~~~~~~~-~~~~~k~~~E~~~-------~~~~~~~~ilR~~~v~g~  157 (287)
                      ..      .+.... .|..+|.....+.       ...++++..+.||.+-.+
T Consensus       160 ~~------~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         160 QG------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             TT------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             CC------CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence            10      011111 2348888776554       356899999999988555

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=1.9e-09  Score=85.63  Aligned_cols=175  Identities=14%  Similarity=0.090  Sum_probs=111.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc-----CCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~~~d~   75 (287)
                      ||||+.||+++++.|+++|++|++++|+.+...+...    .........+..+.+|..+.+.....++.     ...|+
T Consensus        20 TGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~   95 (269)
T d1xu9a_          20 TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVS----HCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDM   95 (269)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccc
Confidence            7999999999999999999999999999765322111    11111235677888999887766655442     26899


Q ss_pred             EEecCCCCcc--------------------c----HHHHHHhCC-CCccEEEEecceeeccCCCCCCCCCCCCCCCcchh
Q 023110           76 VYDINGREAD--------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  130 (287)
                      ++++++....                    +    ++.++..++ +..++|++||...+-..          +....|..
T Consensus        96 li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~----------p~~~~Y~a  165 (269)
T d1xu9a_          96 LILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY----------PMVAAYSA  165 (269)
T ss_dssp             EEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC----------TTCHHHHH
T ss_pred             cccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCC----------CCchHHHH
Confidence            9999887311                    1    333444444 45689999987653211          11122348


Q ss_pred             hhHHHHHHhh---------hCCCcEEEEecCeeecCCCCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHH
Q 023110          131 GKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       131 ~k~~~E~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (287)
                      +|...+.+.+         ..++++..+.||.|-.+         +......+..         .......+++|+.++.
T Consensus       166 sKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~---------~~~~~~~~~~---------~~~~~~~e~~a~~i~~  227 (269)
T d1xu9a_         166 SKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE---------TAMKAVSGIV---------HMQAAPKEECALEIIK  227 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH---------HHHHHSCGGG---------GGGCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc---------HHHHhccCCc---------cccCCCHHHHHHHHHH
Confidence            9998876552         24688899999987443         1222221111         1234557899988888


Q ss_pred             HHcCCc
Q 023110          202 VLGNEK  207 (287)
Q Consensus       202 ~~~~~~  207 (287)
                      .+...+
T Consensus       228 ~~~~~~  233 (269)
T d1xu9a_         228 GGALRQ  233 (269)
T ss_dssp             HHHTTC
T ss_pred             HhhcCC
Confidence            776544

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=7.1e-10  Score=88.44  Aligned_cols=103  Identities=17%  Similarity=0.159  Sum_probs=74.2

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC-----Ccc
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-----~~d   74 (287)
                      |||++-||.+++++|+++ |++|++.+|+.+...+...     .+.....++.++++|+.|.++++++++..     ++|
T Consensus         9 TGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           9 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQ-----QLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHH-----HHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-----HHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            899999999999999986 8999999999876322211     12222457899999999998887766532     799


Q ss_pred             EEEecCCCCcc--------------------c----HHHHHHhCCCCccEEEEeccee
Q 023110           75 VVYDINGREAD--------------------E----VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      ++||+||....                    +    ++.++..++...++|++||...
T Consensus        84 iLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~  141 (275)
T d1wmaa1          84 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMS  141 (275)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH
T ss_pred             EEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccce
Confidence            99999997411                    1    2223333443458999999654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=98.93  E-value=4.3e-09  Score=83.43  Aligned_cols=197  Identities=15%  Similarity=0.080  Sum_probs=116.1

Q ss_pred             CCccc--chHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhc--------
Q 023110            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------   70 (287)
Q Consensus         1 tGatG--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--------   70 (287)
                      |||+|  .||.++++.|.++|++|++.+|+..+..+.+.+       ....+...+++|+.+.++...+++.        
T Consensus        12 tGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~-------~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~   84 (268)
T d2h7ma1          12 SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD-------RLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   84 (268)
T ss_dssp             CCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT-------TSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             ECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH-------HcCCceeeEeeecccccccccccchhhhccccC
Confidence            78655  599999999999999999999987653222211       1135677899999998766555432        


Q ss_pred             CCccEEEecCCCCccc-------------------------HHHHHHhCC---CCccEEEEecceeeccCCCCCCCCCCC
Q 023110           71 KGFDVVYDINGREADE-------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (287)
Q Consensus        71 ~~~d~vi~~a~~~~~~-------------------------~~~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (287)
                      ...|+++|+++.....                         .........   +....+.++|......          .
T Consensus        85 ~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~----------~  154 (268)
T d2h7ma1          85 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA----------M  154 (268)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC----------C
T ss_pred             CCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccccc----------C
Confidence            1479999999863110                         011111111   2234444544333211          1


Q ss_pred             CCCCcchhhhHHHHHHhh-------hCCCcEEEEecCeeecCC-------CCCCh----hHHHHHHHHcCCCccCCCCCC
Q 023110          123 VDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPL-------NYNPV----EEWFFHRLKAGRPIPIPGSGI  184 (287)
Q Consensus       123 ~~~~~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~-------~~~~~----~~~~~~~~~~~~~~~~~~~~~  184 (287)
                      +....|..+|...+.+.+       ..++++..|.||.+-.+.       .....    ...+.......-++.      
T Consensus       155 p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~------  228 (268)
T d2h7ma1         155 PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG------  228 (268)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC------
T ss_pred             cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCC------
Confidence            112223388988887663       458999999999886531       00000    111111221211211      


Q ss_pred             ceeeeeeHHHHHHHHHHHHcCC--ccCCceEEecCCcccC
Q 023110          185 QVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (287)
Q Consensus       185 ~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (287)
                        +.+...+|+|+++..++...  --.|+++.+.++...+
T Consensus       229 --rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         229 --WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             --CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             --CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCcccc
Confidence              12344799999999998542  2378899999987543

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.66  E-value=2.1e-07  Score=75.65  Aligned_cols=201  Identities=8%  Similarity=-0.035  Sum_probs=108.9

Q ss_pred             CC--cccchHHHHHHHHHHcCCeEEEEEcCCccccc----cCCCCChhhh---hhhcCCeEEEEe---------------
Q 023110            1 MG--GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ----QLPGESDQEF---AEFSSKILHLKG---------------   56 (287)
Q Consensus         1 tG--atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~---~~~~~~~~~i~~---------------   56 (287)
                      ||  ++.-||+++++.|.++|.+|+...++......    ..........   .+.........+               
T Consensus         8 TGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (329)
T d1uh5a_           8 AGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDEETK   87 (329)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGCCHHHH
T ss_pred             eCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcccchhhh
Confidence            67  55689999999999999999998876542100    0000000000   000011222222               


Q ss_pred             -----cCCChHHHHhhhhc-----CCccEEEecCCCCcc----------------------cHHHHHHh----CCCCccE
Q 023110           57 -----DRKDYDFVKSSLSA-----KGFDVVYDINGREAD----------------------EVEPILDA----LPNLEQF  100 (287)
Q Consensus        57 -----D~~d~~~~~~~~~~-----~~~d~vi~~a~~~~~----------------------~~~~ll~~----~~~~~~~  100 (287)
                           |+.+.+.++.+++.     -++|++||+++....                      +...+.++    ++...++
T Consensus        88 ~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsI  167 (329)
T d1uh5a_          88 NNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSI  167 (329)
T ss_dssp             TSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEE
T ss_pred             hhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccccccc
Confidence                 44443333333321     279999999875210                      11223333    2333578


Q ss_pred             EEEecceeeccCCCCCCCCCCCCCCCcch-hhhHHHHHHhh--------hCCCcEEEEecCeeecCC-------------
Q 023110          101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE--------SKGVNWTSLRPVYIYGPL-------------  158 (287)
Q Consensus       101 i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~E~~~~--------~~~~~~~ilR~~~v~g~~-------------  158 (287)
                      |.+||......          .+....+| .+|..++.+.+        ++|+++..|.||.+-.+.             
T Consensus       168 v~iss~~~~~~----------~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~  237 (329)
T d1uh5a_         168 ISLTYHASQKV----------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN  237 (329)
T ss_dssp             EEEECGGGTSC----------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC--------
T ss_pred             ccceeehhccc----------ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhh
Confidence            88887654211          11112344 78998887653        358999999999774310             


Q ss_pred             -------------------------------CCCChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHHHHHHHcCC-
Q 023110          159 -------------------------------NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE-  206 (287)
Q Consensus       159 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~-  206 (287)
                                                     ........+.....+..++.         -+...+|+|.+++.++... 
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~---------R~~~pedvA~~v~fLaSd~s  308 (329)
T d1uh5a_         238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLR---------QKLLSTDIGSVASFLLSRES  308 (329)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHSSSC---------SCCCHHHHHHHHHHHHSGGG
T ss_pred             hhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCC---------CCcCHHHHHHHHHHHhCchh
Confidence                                           00111122222222222221         2345899999999888542 


Q ss_pred             -ccCCceEEecCCcc
Q 023110          207 -KASRQVFNISGEKY  220 (287)
Q Consensus       207 -~~~~~~~~i~~~~~  220 (287)
                       --.|+.+.+.++..
T Consensus       309 ~~iTGq~i~VDGG~~  323 (329)
T d1uh5a_         309 RAITGQTIYVDNGLN  323 (329)
T ss_dssp             TTCCSCEEEESTTGG
T ss_pred             CCccCCeEEECCCcc
Confidence             23788999988864

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.62  E-value=4.1e-09  Score=79.14  Aligned_cols=75  Identities=19%  Similarity=0.203  Sum_probs=60.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+|.||+.+++.|.++|++|++++|+.+...+...     .+.. ...+....+|+.+.+.+.+++.  ++|+|||++
T Consensus        29 tGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~d~~~~~~~~~~~~--~iDilin~A  100 (191)
T d1luaa1          29 LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAAD-----SVNK-RFKVNVTAAETADDASRAEAVK--GAHFVFTAG  100 (191)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----HHHH-HHTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred             ECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHH-----HHHh-ccchhhhhhhcccHHHHHHHhc--CcCeeeecC
Confidence            7999999999999999999999999999766322111     1111 2355678899999999999998  899999999


Q ss_pred             CCC
Q 023110           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      +..
T Consensus       101 g~g  103 (191)
T d1luaa1         101 AIG  103 (191)
T ss_dssp             CTT
T ss_pred             ccc
Confidence            863

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.61  E-value=1e-06  Score=70.42  Aligned_cols=84  Identities=7%  Similarity=-0.008  Sum_probs=55.2

Q ss_pred             chhhhHHHHHHh--------hhCCCcEEEEecCeeecCCCCC-ChhHHHHHHHHcCCCccCCCCCCceeeeeeHHHHHHH
Q 023110          128 RHKGKLNTESVL--------ESKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       128 ~~~~k~~~E~~~--------~~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (287)
                      |..+|...+.+.        ...++++..|.||.+..+.... .....+.+...+.-++.         -+...+|+|.+
T Consensus       192 y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~Plg---------R~~~peevA~~  262 (297)
T d1d7oa_         192 MSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQ---------KTLTADEVGNA  262 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSC---------CCBCHHHHHHH
T ss_pred             eecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHHHHhCCCCC---------CCCCHHHHHHH
Confidence            447777665543        2468999999999998875332 23334444444433331         13458999999


Q ss_pred             HHHHHcCC--ccCCceEEecCCcc
Q 023110          199 FVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~~  220 (287)
                      ++.++...  .-+|+++.+.++..
T Consensus       263 v~fL~S~~a~~itGq~i~vDGG~s  286 (297)
T d1d7oa_         263 AAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhCchhcCCcCceEEECcCHh
Confidence            99998543  34788999988753

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.59  E-value=3.5e-07  Score=71.61  Aligned_cols=189  Identities=16%  Similarity=0.146  Sum_probs=98.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh----hhc--CCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS----LSA--KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~----~~~--~~~d   74 (287)
                      |||++.||++++++|.++|++|++++|+....                      ..|+.+.+.....    ..+  ...|
T Consensus         7 TGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~----------------------~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAEV----------------------IADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE----------------------ECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECChHHH----------------------HHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            79999999999999999999999999986542                      2344443332222    111  2589


Q ss_pred             EEEecCCCCccc-------------HHHHH----HhCC--CCccEEEEecceeec-cCCCCCCC----------------
Q 023110           75 VVYDINGREADE-------------VEPIL----DALP--NLEQFIYCSSAGVYL-KSDLLPHC----------------  118 (287)
Q Consensus        75 ~vi~~a~~~~~~-------------~~~ll----~~~~--~~~~~i~~Ss~~v~~-~~~~~~~~----------------  118 (287)
                      +++++|+.....             ...+.    +...  .......+++..... .....+..                
T Consensus        65 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~  144 (257)
T d1fjha_          65 GLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVE  144 (257)
T ss_dssp             EEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHH
T ss_pred             EEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehh
Confidence            999999864211             11111    2211  223344444322110 00000000                


Q ss_pred             CCCCCCCC-cchhhhHHHHHHhh-------hCCCcEEEEecCeeecCCCCCChh-HHHHHHHHcCCCccCCCCCCceeee
Q 023110          119 ETDTVDPK-SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       119 e~~~~~~~-~~~~~k~~~E~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                      ......+. .|..+|...+.+.+       ..|+++..|.||.+-.|.....+. ........+.. .+     .  --+
T Consensus       145 ~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-~P-----l--gR~  216 (257)
T d1fjha_         145 HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFV-PP-----M--GRR  216 (257)
T ss_dssp             TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CC-CS-----T--TSC
T ss_pred             ccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcC-CC-----C--CCC
Confidence            00000011 23388998887663       468999999999987663211110 01111111110 01     0  114


Q ss_pred             eeHHHHHHHHHHHHcCC--ccCCceEEecCCc
Q 023110          190 GHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       190 i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (287)
                      ...+|+|.++..++...  --+|+.+.+.++-
T Consensus       217 g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~  248 (257)
T d1fjha_         217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             cCHHHHHHHHHHHhCchhCCccCceEEeCCCc
Confidence            46899999999998543  3478899998873

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.87  E-value=2.3e-05  Score=54.43  Aligned_cols=68  Identities=16%  Similarity=0.174  Sum_probs=54.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d~vi~~a~   81 (287)
                      |.|.+|+.+++.|.+.|++|++++.++..... +.          ..+...+.+|..+++.+.++ ++  ++|.||-+.+
T Consensus         7 G~G~~G~~la~~L~~~g~~vvvid~d~~~~~~-~~----------~~~~~~~~gd~~~~~~l~~a~i~--~a~~vi~~~~   73 (134)
T d2hmva1           7 GLGRFGGSIVKELHRMGHEVLAVDINEEKVNA-YA----------SYATHAVIANATEENELLSLGIR--NFEYVIVAIG   73 (134)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCEEEESCHHHHHH-TT----------TTCSEEEECCTTCTTHHHHHTGG--GCSEEEECCC
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEecCcHHHHHH-HH----------HhCCcceeeecccchhhhccCCc--cccEEEEEcC
Confidence            45899999999999999999999999877432 22          24667889999999988877 66  7898887765


Q ss_pred             CC
Q 023110           82 RE   83 (287)
Q Consensus        82 ~~   83 (287)
                      .+
T Consensus        74 ~~   75 (134)
T d2hmva1          74 AN   75 (134)
T ss_dssp             SC
T ss_pred             ch
Confidence            43

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.68  E-value=2.7e-05  Score=53.94  Aligned_cols=68  Identities=19%  Similarity=0.352  Sum_probs=53.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh-hhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~~~d~vi~~a~   81 (287)
                      |.|.+|+.+++.|.+.|++|+++++++..... +.        + ..+...+.+|..+++.+.++ ++  ++|+++-+..
T Consensus         7 G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~-~~--------~-~~~~~vi~Gd~~~~~~l~~~~i~--~a~~vv~~t~   74 (132)
T d1lssa_           7 GIGRVGYTLAKSLSEKGHDIVLIDIDKDICKK-AS--------A-EIDALVINGDCTKIKTLEDAGIE--DADMYIAVTG   74 (132)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HH--------H-HCSSEEEESCTTSHHHHHHTTTT--TCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCCcceecCChhhhhh-hh--------h-hhhhhhccCcccchhhhhhcChh--hhhhhcccCC
Confidence            35999999999999999999999999765321 11        0 13678999999999999887 45  7899888754


Q ss_pred             C
Q 023110           82 R   82 (287)
Q Consensus        82 ~   82 (287)
                      .
T Consensus        75 ~   75 (132)
T d1lssa_          75 K   75 (132)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=0.00022  Score=47.35  Aligned_cols=64  Identities=13%  Similarity=-0.006  Sum_probs=52.1

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |+|++|+-++....+.|++|++++.+++.....+             .-+++.+|+.|.+.+.++....++|+|..-
T Consensus        18 GgGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v-------------a~~~i~~~~~d~~~l~~~~~~~~~DviT~E   81 (111)
T d1kjqa2          18 GSGELGKEVAIECQRLGVEVIAVDRYADAPAMHV-------------AHRSHVINMLDGDALRRVVELEKPHYIVPE   81 (111)
T ss_dssp             SCSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG-------------SSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             eCCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc-------------CCeEEECCCCCHHHHHHHHHhhCCceEEEE
Confidence            5899999999999999999999999887654333             235788999999999988865578988643

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.31  E-value=0.00032  Score=51.17  Aligned_cols=96  Identities=16%  Similarity=0.268  Sum_probs=62.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEE-E-ecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-K-GDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i-~-~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      +||+|-+|...++.+...|.+|+++++++++.. .++          ..+...+ . -|-...+.+.+.....++|+||+
T Consensus        36 ~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~-~~~----------~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D  104 (182)
T d1v3va2          36 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA-YLK----------QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFD  104 (182)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH----------HTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEE
T ss_pred             EeCCCchhHHHHHHHHccCCEEEEeCCCHHHHH-HHH----------hhhhhhhcccccccHHHHHHHHhhcCCCceeEE
Confidence            589999999999999999999999999876521 111          1223222 1 22222344444555568999999


Q ss_pred             cCCCCcccHHHHHHhCCCCccEEEEecceee
Q 023110           79 INGREADEVEPILDALPNLEQFIYCSSAGVY  109 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~v~  109 (287)
                      +.|  .......++.++...+++.++....|
T Consensus       105 ~vG--~~~~~~~~~~l~~~G~~v~~G~~~~~  133 (182)
T d1v3va2         105 NVG--GEFLNTVLSQMKDFGKIAICGAISVY  133 (182)
T ss_dssp             SSC--HHHHHHHGGGEEEEEEEEECCCGGGT
T ss_pred             ecC--chhhhhhhhhccCCCeEEeecceeec
Confidence            987  34556667777644577766655444

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.21  E-value=0.00031  Score=49.06  Aligned_cols=75  Identities=20%  Similarity=0.262  Sum_probs=42.9

Q ss_pred             CCcccchHHHHHHHHHHcC----CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      .||||++|+.+++.|+++.    .+++.+.++...-. ...          ...-.....++.+.+.    ++  ++|++
T Consensus         7 vGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~-~~~----------~~~~~~~~~~~~~~~~----~~--~~Div   69 (146)
T d1t4ba1           7 IGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQA-APS----------FGGTTGTLQDAFDLEA----LK--ALDII   69 (146)
T ss_dssp             ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSB-CCG----------GGTCCCBCEETTCHHH----HH--TCSEE
T ss_pred             ECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccc-ccc----------ccCCceeeecccchhh----hh--cCcEE
Confidence            4999999999999988763    36666665544311 111          0111112223334333    34  89999


Q ss_pred             EecCCCCcccHHHHHHhC
Q 023110           77 YDINGREADEVEPILDAL   94 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~   94 (287)
                      |.+++  ......+...+
T Consensus        70 F~a~~--~~~s~~~~~~~   85 (146)
T d1t4ba1          70 VTCQG--GDYTNEIYPKL   85 (146)
T ss_dssp             EECSC--HHHHHHHHHHH
T ss_pred             EEecC--chHHHHhhHHH
Confidence            99985  44444555544

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.17  E-value=0.00036  Score=50.52  Aligned_cols=68  Identities=18%  Similarity=0.196  Sum_probs=50.5

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |+|.+|+++++.|.++||+|++++|+..........         .........+..+.......+.  ..|.++.+..
T Consensus         9 GaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~---------~~~~~~~~~~~~~~~~~~~~i~--~~~~~i~~~~   76 (182)
T d1e5qa1           9 GSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG---------VQHSTPISLDVNDDAALDAEVA--KHDLVISLIP   76 (182)
T ss_dssp             CCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT---------CTTEEEEECCTTCHHHHHHHHT--TSSEEEECSC
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc---------ccccccccccccchhhhHhhhh--ccceeEeecc
Confidence            459999999999999999999999998874322111         2345555666677777788887  7888887653

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.89  E-value=0.00051  Score=49.48  Aligned_cols=87  Identities=16%  Similarity=0.194  Sum_probs=55.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|-+|...++.+...|.+|+++++++++.. ..+          .-+++.+ .|..+..  ...-...++|+||++.
T Consensus        34 ~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~-~~~----------~lGa~~~-i~~~~~~--~~~~~~~g~D~v~d~~   99 (171)
T d1iz0a2          34 QAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPL----------ALGAEEA-ATYAEVP--ERAKAWGGLDLVLEVR   99 (171)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH-HHH----------HTTCSEE-EEGGGHH--HHHHHTTSEEEEEECS
T ss_pred             Eeccccchhhhhhhhcccccccccccccccccc-ccc----------cccccee-eehhhhh--hhhhcccccccccccc
Confidence            589999999999999999999999998866521 111          1233322 2333322  2222334899999998


Q ss_pred             CCCcccHHHHHHhCCCCccEEEEe
Q 023110           81 GREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        81 ~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      |.   .....++.++...+++.++
T Consensus       100 G~---~~~~~~~~l~~~G~~v~~G  120 (171)
T d1iz0a2         100 GK---EVEESLGLLAHGGRLVYIG  120 (171)
T ss_dssp             CT---THHHHHTTEEEEEEEEEC-
T ss_pred             ch---hHHHHHHHHhcCCcEEEEe
Confidence            73   3455666666445777654

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.84  E-value=0.0028  Score=44.39  Aligned_cols=97  Identities=10%  Similarity=0.142  Sum_probs=55.2

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChH-HHHhhhhcCC-ccEEEec
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-FVKSSLSAKG-FDVVYDI   79 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~-~~~~~~~~~~-~d~vi~~   79 (287)
                      ||.|.+|+++++.|.+.||+|.+.+|+..........         .....+....+.... -+........ =.+++++
T Consensus        16 Gg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~   86 (152)
T d2pv7a2          16 GGYGKLGGLFARYLRASGYPISILDREDWAVAESILA---------NADVVIVSVPINLTLETIERLKPYLTENMLLADL   86 (152)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT---------TCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEEC
T ss_pred             cCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh---------hccccccccchhhheeeeecccccccCCceEEEe
Confidence            6799999999999999999999999987663322110         122223333322222 2222222212 2377888


Q ss_pred             CCCCcccHHHHHHhCCCCccEEEEecceeecc
Q 023110           80 NGREADEVEPILDALPNLEQFIYCSSAGVYLK  111 (287)
Q Consensus        80 a~~~~~~~~~ll~~~~~~~~~i~~Ss~~v~~~  111 (287)
                      ++........+.+...  .+|  +++.-+.|.
T Consensus        87 ~Svk~~~~~~~~~~~~--~~~--v~~hP~~Gp  114 (152)
T d2pv7a2          87 TSVKREPLAKMLEVHT--GAV--LGLHPMFGA  114 (152)
T ss_dssp             CSCCHHHHHHHHHHCS--SEE--EEEEECSCT
T ss_pred             cccCHHHHHHHHHHcc--CCE--EEecccCCC
Confidence            8766555555555433  344  344444443

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.82  E-value=0.00038  Score=48.59  Aligned_cols=87  Identities=18%  Similarity=0.167  Sum_probs=47.5

Q ss_pred             CCcccchHHHHHHHHHHcC---CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      .||||++|+.|++.|.+++   .++..+..+.+. -+.+.          ...-+....++.+     ..+.  ++|+++
T Consensus         8 vGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~-Gk~i~----------~~~~~~~~~~~~~-----~~~~--~~d~vf   69 (144)
T d2hjsa1           8 VGATGSVGEALVGLLDERDFPLHRLHLLASAESA-GQRMG----------FAESSLRVGDVDS-----FDFS--SVGLAF   69 (144)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT-TCEEE----------ETTEEEECEEGGG-----CCGG--GCSEEE
T ss_pred             ECCCCHHHHHHHHHHHhcCCCceEEEEEeecccC-Cccee----------eccccchhccchh-----hhhc--cceEEE
Confidence            4999999999999998654   367666544332 11111          0111111122211     1234  789998


Q ss_pred             ecCCCCcccHHHHHHhCC-CCccEEEEecce
Q 023110           78 DINGREADEVEPILDALP-NLEQFIYCSSAG  107 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~  107 (287)
                      .+++  ......+...+. ...++|-.|+..
T Consensus        70 ~a~p--~~~s~~~~~~~~~~g~~VID~Ss~f   98 (144)
T d2hjsa1          70 FAAA--AEVSRAHAERARAAGCSVIDLSGAL   98 (144)
T ss_dssp             ECSC--HHHHHHHHHHHHHTTCEEEETTCTT
T ss_pred             ecCC--cchhhhhccccccCCceEEeechhh
Confidence            8775  333444444433 456777777654

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.68  E-value=0.00092  Score=48.27  Aligned_cols=92  Identities=17%  Similarity=0.129  Sum_probs=57.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC-hHHHHhhhhcCCccEEEec
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d-~~~~~~~~~~~~~d~vi~~   79 (287)
                      +||+|-+|+..++.+...|.+|++.++++.+.. ...        +  .+.+.+. |-.+ .+.........++|+||++
T Consensus        38 ~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~-~~~--------~--lGa~~vi-~~~~~~~~~~~~~~~~gvD~vid~  105 (176)
T d1xa0a2          38 TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD-YLR--------V--LGAKEVL-AREDVMAERIRPLDKQRWAAAVDP  105 (176)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHH-HHH--------H--TTCSEEE-ECC---------CCSCCEEEEEEC
T ss_pred             EeccchHHHHHHHHHHHcCCceEEecCchHHHH-HHH--------h--cccceee-ecchhHHHHHHHhhccCcCEEEEc
Confidence            589999999999999999999999999887732 111        1  1222211 2221 1222233344589999999


Q ss_pred             CCCCcccHHHHHHhCCCCccEEEEecc
Q 023110           80 NGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        80 a~~~~~~~~~ll~~~~~~~~~i~~Ss~  106 (287)
                      .+  .......++.++...|++.++..
T Consensus       106 vg--g~~~~~~l~~l~~~Griv~~G~~  130 (176)
T d1xa0a2         106 VG--GRTLATVLSRMRYGGAVAVSGLT  130 (176)
T ss_dssp             ST--TTTHHHHHHTEEEEEEEEECSCC
T ss_pred             CC--chhHHHHHHHhCCCceEEEeecc
Confidence            87  33566777777744578766653

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.62  E-value=0.0017  Score=47.02  Aligned_cols=91  Identities=18%  Similarity=0.191  Sum_probs=60.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHH---HHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~---~~~~~~~~~~d~vi   77 (287)
                      +||+|.+|...++.+...|.+|+++++++++. +.+++          .+.+.+ .|..+.+.   +.+.....++|+||
T Consensus        32 ~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~-~~l~~----------~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~   99 (183)
T d1pqwa_          32 HSATGGVGMAAVSIAKMIGARIYTTAGSDAKR-EMLSR----------LGVEYV-GDSRSVDFADEILELTDGYGVDVVL   99 (183)
T ss_dssp             TTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHT----------TCCSEE-EETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred             ECCCCCcccccchhhccccccceeeecccccc-ccccc----------cccccc-ccCCccCHHHHHHHHhCCCCEEEEE
Confidence            58999999999999999999999999886652 22221          233332 34445433   33333335799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEec
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      ++.+.  ......++.++...++|.++.
T Consensus       100 d~~g~--~~~~~~~~~l~~~G~~v~~G~  125 (183)
T d1pqwa_         100 NSLAG--EAIQRGVQILAPGGRFIELGK  125 (183)
T ss_dssp             ECCCT--HHHHHHHHTEEEEEEEEECSC
T ss_pred             ecccc--hHHHHHHHHhcCCCEEEEEcc
Confidence            99883  455667777774457776643

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.58  E-value=0.0012  Score=47.71  Aligned_cols=92  Identities=16%  Similarity=0.144  Sum_probs=57.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|..+++.|++.||+|++.+|++++..+....         ........+ ....+.+...+.  ++|.++-+...
T Consensus         9 GlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~---------~~~~~~~~~-a~~~~~~~~~~~--~~~~ii~~~~~   76 (176)
T d2pgda2           9 GLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN---------EAKGTKVLG-AHSLEEMVSKLK--KPRRIILLVKA   76 (176)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT---------TTTTSSCEE-CSSHHHHHHHBC--SSCEEEECSCT
T ss_pred             eEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHh---------ccccccccc-hhhhhhhhhhhc--ccceEEEecCc
Confidence            579999999999999999999999998764321110         000000011 235566777776  78888877543


Q ss_pred             Cccc----HHHHHHhCCCCccEEEEecce
Q 023110           83 EADE----VEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~~----~~~ll~~~~~~~~~i~~Ss~~  107 (287)
                      . ..    ...++..++..+-+|-+||..
T Consensus        77 ~-~~v~~v~~~l~~~~~~g~iiid~sT~~  104 (176)
T d2pgda2          77 G-QAVDNFIEKLVPLLDIGDIIIDGGNSE  104 (176)
T ss_dssp             T-HHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred             h-HHHHHHHHHHHhccccCcEEEecCcch
Confidence            2 22    234555555445677666643

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.58  E-value=0.0026  Score=44.63  Aligned_cols=72  Identities=15%  Similarity=0.204  Sum_probs=53.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-+|+.+++.|.++|++|+++..++........       .....++.++.||..+++.+.++-- .++++||-+...
T Consensus        10 G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~-------~~~~~~~~vi~Gd~~d~~~L~~a~i-~~a~~vi~~~~~   81 (153)
T d1id1a_          10 GHSILAINTILQLNQRGQNVTVISNLPEDDIKQLE-------QRLGDNADVIPGDSNDSSVLKKAGI-DRCRAILALSDN   81 (153)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHH-------HHHCTTCEEEESCTTSHHHHHHHTT-TTCSEEEECSSC
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHH-------HhhcCCcEEEEccCcchHHHHHhcc-ccCCEEEEcccc
Confidence            45899999999999999999999988754221111       0013589999999999998876533 278999988754

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.47  E-value=0.0005  Score=50.49  Aligned_cols=32  Identities=28%  Similarity=0.397  Sum_probs=29.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~   32 (287)
                      +||+|.+|++|++.|.+.||+|++.+|++++.
T Consensus         6 igGaG~iG~alA~~la~~G~~V~l~~R~~e~~   37 (212)
T d1jaya_           6 LGGTGNLGKGLALRLATLGHEIVVGSRREEKA   37 (212)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSHHHH
T ss_pred             EeCCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            48889999999999999999999999997663

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.44  E-value=0.0016  Score=46.37  Aligned_cols=72  Identities=19%  Similarity=0.266  Sum_probs=46.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+++++.|.+.||+|++.+|+++......+          ...+.... +  +.    +.++  ++|+||-+.  
T Consensus         7 G~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~----------~~~~~~~~-~--~~----~~~~--~~DiIilav--   65 (165)
T d2f1ka2           7 GLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE----------RQLVDEAG-Q--DL----SLLQ--TAKIIFLCT--   65 (165)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----------TTSCSEEE-S--CG----GGGT--TCSEEEECS--
T ss_pred             eecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH----------hhccceee-e--ec----cccc--ccccccccC--
Confidence            56999999999999999999999998765321111          01111111 1  11    3455  899998765  


Q ss_pred             CcccHHHHHHhCC
Q 023110           83 EADEVEPILDALP   95 (287)
Q Consensus        83 ~~~~~~~ll~~~~   95 (287)
                      ....+..+++.+.
T Consensus        66 p~~~~~~vl~~l~   78 (165)
T d2f1ka2          66 PIQLILPTLEKLI   78 (165)
T ss_dssp             CHHHHHHHHHHHG
T ss_pred             cHhhhhhhhhhhh
Confidence            3455666666654

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.40  E-value=0.0043  Score=43.96  Aligned_cols=99  Identities=10%  Similarity=0.056  Sum_probs=59.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCC--CCChhhhhhhcCCeEEEEecCCChHHHHhhhhcC--------C
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP--GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--------G   72 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--------~   72 (287)
                      |.|.+|+.+++.|+++||+|.+.+|+.........  ........+.....+++..-+.+....+.++...        .
T Consensus         8 GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~~~~l~~   87 (162)
T d3cuma2           8 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP   87 (162)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCHHHHSCT
T ss_pred             EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccccccCCC
Confidence            67999999999999999999999998765221110  0000111122234455555566655555554311        2


Q ss_pred             ccEEEecCCCCcccHHHHHHhCC-CCccEE
Q 023110           73 FDVVYDINGREADEVEPILDALP-NLEQFI  101 (287)
Q Consensus        73 ~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i  101 (287)
                      =++||+++......+..+.+.++ ...+|+
T Consensus        88 g~iiid~st~~p~~~~~~~~~~~~~gi~~~  117 (162)
T d3cuma2          88 GTLVLECSTIAPTSARKIHAAARERGLAML  117 (162)
T ss_dssp             TCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             CCEEEECCCCCHHHHHHHHHHHHHCCCcEE
Confidence            35777887777777777777765 333444

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=96.40  E-value=0.0053  Score=42.53  Aligned_cols=88  Identities=20%  Similarity=0.237  Sum_probs=47.6

Q ss_pred             CCcccchHHHHHHHHHHcC----CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      .||||++|+.|++.|+++.    .++..++.+... .+... .        ..... ...+..+.+    .++  ++|+|
T Consensus         6 iGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~-gk~~~-~--------~~~~~-~~~~~~~~~----~~~--~~Dvv   68 (147)
T d1mb4a1           6 VGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIG-VPAPN-F--------GKDAG-MLHDAFDIE----SLK--QLDAV   68 (147)
T ss_dssp             ESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCS-SBCCC-S--------SSCCC-BCEETTCHH----HHT--TCSEE
T ss_pred             ECCccHHHHHHHHHHHhcCCCCceEEEEecccccc-ccccc-c--------CCcce-eeecccchh----hhc--cccEE
Confidence            4999999999999998753    356655544322 11111 0        01111 111223333    245  89999


Q ss_pred             EecCCCCcccHHHHHHhCC--CCc-cEEEEecce
Q 023110           77 YDINGREADEVEPILDALP--NLE-QFIYCSSAG  107 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~--~~~-~~i~~Ss~~  107 (287)
                      |.+..  ...+..+...+.  +.+ .+|=.|+..
T Consensus        69 F~alp--~~~s~~~~~~l~~~g~~~~VIDlSsdf  100 (147)
T d1mb4a1          69 ITCQG--GSYTEKVYPALRQAGWKGYWIDAASTL  100 (147)
T ss_dssp             EECSC--HHHHHHHHHHHHHTTCCSEEEESSSTT
T ss_pred             EEecC--chHHHHHhHHHHHcCCceEEEeCCccc
Confidence            99875  333444554433  443 466667644

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.40  E-value=0.0047  Score=46.19  Aligned_cols=65  Identities=11%  Similarity=0.064  Sum_probs=45.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC--hHHHHhhhhcCCccEEEecC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d--~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||.+|.+|++.+..+|++|+.++.......              +..+..+...-.+  .+.+...+.  ++|++|++|
T Consensus        30 SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~--------------p~~~~~~~~~t~~~m~~~~~~~~~--~~D~~i~aA   93 (223)
T d1u7za_          30 SSGKMGFAIAAAAARRGANVTLVSGPVSLPT--------------PPFVKRVDVMTALEMEAAVNASVQ--QQNIFIGCA   93 (223)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEECSCCCCC--------------CTTEEEEECCSHHHHHHHHHHHGG--GCSEEEECC
T ss_pred             CcHHHHHHHHHHHHHcCCchhhhhcccccCc--------------ccccccceehhhHHHHHHHHhhhc--cceeEeeee
Confidence            7999999999999999999999987655311              2455555543211  123334445  799999999


Q ss_pred             CCC
Q 023110           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      ++.
T Consensus        94 Avs   96 (223)
T d1u7za_          94 AVA   96 (223)
T ss_dssp             BCC
T ss_pred             chh
Confidence            874

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.0021  Score=46.18  Aligned_cols=90  Identities=10%  Similarity=0.166  Sum_probs=59.3

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHH---hhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK---SSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~---~~~~~~~~d~vi   77 (287)
                      +||+|.+|...++.+...|.+|+++++++++. +..+          .-+++.+ .|..+.+..+   +.....++|+|+
T Consensus        35 ~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~-~~~~----------~~Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~  102 (174)
T d1yb5a2          35 HGASGGVGLAACQIARAYGLKILGTAGTEEGQ-KIVL----------QNGAHEV-FNHREVNYIDKIKKYVGEKGIDIII  102 (174)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHH----------HTTCSEE-EETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             EeccccccccccccccccCccccccccccccc-cccc----------ccCcccc-cccccccHHHHhhhhhccCCceEEe
Confidence            48899999999999999999999999876542 1111          1123222 3555544333   333345799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEe
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      ++.+  .......++.++...+++.++
T Consensus       103 d~~g--~~~~~~~~~~l~~~G~iv~~G  127 (174)
T d1yb5a2         103 EMLA--NVNLSKDLSLLSHGGRVIVVG  127 (174)
T ss_dssp             ESCH--HHHHHHHHHHEEEEEEEEECC
T ss_pred             eccc--HHHHHHHHhccCCCCEEEEEe
Confidence            9987  244566677777445777664

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.39  E-value=0.002  Score=45.72  Aligned_cols=29  Identities=24%  Similarity=0.378  Sum_probs=26.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|+.+++.|+++||+|++.+|++..
T Consensus         7 GlG~MG~~~A~~L~~~G~~V~~~d~~~~~   35 (161)
T d1vpda2           7 GLGIMGKPMSKNLLKAGYSLVVSDRNPEA   35 (161)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ehhHHHHHHHHHHHHCCCeEEEEeCCcch
Confidence            57999999999999999999999998765

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.38  E-value=0.00086  Score=48.64  Aligned_cols=86  Identities=12%  Similarity=0.001  Sum_probs=51.2

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|.+|..++..|.++||+|.+++|++.......... ..  .......+..........++.+.++  ++|+||.+.. 
T Consensus         8 GaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~e~~~--~aD~iii~v~-   81 (184)
T d1bg6a2           8 GLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRG-AI--IAEGPGLAGTAHPDLLTSDIGLAVK--DADVILIVVP-   81 (184)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHT-SE--EEESSSCCEEECCSEEESCHHHHHT--TCSEEEECSC-
T ss_pred             CccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcC-CC--chhhhhhhhhhhhhhhhhhhHhHhc--CCCEEEEEEc-
Confidence            5699999999999999999999999865522110000 00  0000111112211112234567777  8999998753 


Q ss_pred             CcccHHHHHHhCC
Q 023110           83 EADEVEPILDALP   95 (287)
Q Consensus        83 ~~~~~~~ll~~~~   95 (287)
                       ......+++.++
T Consensus        82 -~~~~~~~~~~i~   93 (184)
T d1bg6a2          82 -AIHHASIAANIA   93 (184)
T ss_dssp             -GGGHHHHHHHHG
T ss_pred             -hhHHHHHHHHhh
Confidence             556677776655

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.23  E-value=0.006  Score=42.18  Aligned_cols=72  Identities=25%  Similarity=0.246  Sum_probs=44.2

Q ss_pred             CCcccchHHHHHHHHHHcCC--eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      +||+|.+|++++-.|..+|.  +++.++.++... ..++      +. ....+.....-+ ...+..+.++  ++|+||.
T Consensus         6 iGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~-~a~D------l~-~~~~~~~~~~~~-~~~~~~~~~~--~aDivVi   74 (144)
T d1mlda1           6 LGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG-VAAD------LS-HIETRATVKGYL-GPEQLPDCLK--GCDVVVI   74 (144)
T ss_dssp             ETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH-HHHH------HT-TSSSSCEEEEEE-SGGGHHHHHT--TCSEEEE
T ss_pred             ECCCChHHHHHHHHHHhCCccceEEEEeccccch-hhHH------Hh-hhhhhcCCCeEE-cCCChHHHhC--CCCEEEE
Confidence            48899999999999998874  788888765331 1000      00 011111112222 3445566677  9999999


Q ss_pred             cCCCC
Q 023110           79 INGRE   83 (287)
Q Consensus        79 ~a~~~   83 (287)
                      ++|..
T Consensus        75 tag~~   79 (144)
T d1mlda1          75 PAGVP   79 (144)
T ss_dssp             CCSCC
T ss_pred             CCCcC
Confidence            99863

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.04  E-value=0.0069  Score=43.47  Aligned_cols=90  Identities=17%  Similarity=0.157  Sum_probs=58.9

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHh---hhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS---SLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~---~~~~~~~d~vi   77 (287)
                      +||+|.+|..+++.+...|.+|+++++++.+.. .++        +  .+.+.+ .|..+++..++   +-...++|+|+
T Consensus        35 ~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~-~~~--------~--lGa~~v-i~~~~~d~~~~v~~~t~g~g~d~v~  102 (179)
T d1qora2          35 HAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ-SAL--------K--AGAWQV-INYREEDLVERLKEITGGKKVRVVY  102 (179)
T ss_dssp             SSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHH--------H--HTCSEE-EETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             EccccccchHHHHHHHHhCCeEeecccchHHHH-HHH--------h--cCCeEE-EECCCCCHHHHHHHHhCCCCeEEEE
Confidence            589999999999999999999999999987632 111        1  133322 35555443333   33345799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEe
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      ++.+  .......++.++...+++..+
T Consensus       103 d~~g--~~~~~~~~~~l~~~G~~v~~g  127 (179)
T d1qora2         103 DSVG--RDTWERSLDCLQRRGLMVSFG  127 (179)
T ss_dssp             ECSC--GGGHHHHHHTEEEEEEEEECC
T ss_pred             eCcc--HHHHHHHHHHHhcCCeeeecc
Confidence            9987  344556666666333565444

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.74  E-value=0.0017  Score=46.90  Aligned_cols=90  Identities=18%  Similarity=0.170  Sum_probs=58.2

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|-+|...++.+...|.+|++++|++.+.. .++          ..+.+.+. |..+.+ ..+.+.....|.++++.
T Consensus        38 ~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~-~~~----------~lGad~vi-~~~~~~-~~~~l~~~~~~~vvD~V  104 (177)
T d1o89a2          38 TGASGGVGSTAVALLHKLGYQVVAVSGRESTHE-YLK----------SLGASRVL-PRDEFA-ESRPLEKQVWAGAIDTV  104 (177)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH-HHH----------HHTEEEEE-EGGGSS-SCCSSCCCCEEEEEESS
T ss_pred             EEccccchHHHHHHHHHcCCCeEEEecchhHHH-HHH----------hhcccccc-ccccHH-HHHHHHhhcCCeeEEEc
Confidence            589999999999999999999999999877632 111          12343332 332222 23344445689999987


Q ss_pred             CCCcccHHHHHHhCCCCccEEEEec
Q 023110           81 GREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +-  ......++.++...+++.++.
T Consensus       105 gg--~~~~~~l~~l~~~Griv~~G~  127 (177)
T d1o89a2         105 GD--KVLAKVLAQMNYGGCVAACGL  127 (177)
T ss_dssp             CH--HHHHHHHHTEEEEEEEEECCC
T ss_pred             ch--HHHHHHHHHhccccceEeecc
Confidence            63  335556666664457776554

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.71  E-value=0.011  Score=37.61  Aligned_cols=64  Identities=20%  Similarity=0.273  Sum_probs=43.1

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      ||+|.  ++|++.|.++|++|.+-++..+...+.+.          ..++.+..++-  ++.    ++  ++|.||...+
T Consensus        17 gG~GM--s~LA~~L~~~G~~VsGSD~~~~~~~~~L~----------~~Gi~v~~g~~--~~~----i~--~~d~vV~S~A   76 (96)
T d1p3da1          17 GGAGM--SGIAEILLNEGYQISGSDIADGVVTQRLA----------QAGAKIYIGHA--EEH----IE--GASVVVVSSA   76 (96)
T ss_dssp             TSTTH--HHHHHHHHHHTCEEEEEESCCSHHHHHHH----------HTTCEEEESCC--GGG----GT--TCSEEEECTT
T ss_pred             CHHHH--HHHHHHHHhCCCEEEEEeCCCChhhhHHH----------HCCCeEEECCc--ccc----CC--CCCEEEECCC
Confidence            55555  56899999999999999988665333322          35676655433  222    34  7899999888


Q ss_pred             CCcc
Q 023110           82 READ   85 (287)
Q Consensus        82 ~~~~   85 (287)
                      ....
T Consensus        77 I~~~   80 (96)
T d1p3da1          77 IKDD   80 (96)
T ss_dssp             SCTT
T ss_pred             cCCC
Confidence            6543

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.66  E-value=0.016  Score=41.70  Aligned_cols=80  Identities=18%  Similarity=0.082  Sum_probs=51.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-||+.+++.|...|.+|++.+|.+....                 ..       -.+++.++++  .+|+|+.+...
T Consensus        49 G~G~IG~~va~~l~~~g~~v~~~d~~~~~~~-----------------~~-------~~~~l~ell~--~sDiv~~~~pl  102 (181)
T d1qp8a1          49 GLGEIGTRVGKILAALGAQVRGFSRTPKEGP-----------------WR-------FTNSLEEALR--EARAAVCALPL  102 (181)
T ss_dssp             SCSTHHHHHHHHHHHTTCEEEEECSSCCCSS-----------------SC-------CBSCSHHHHT--TCSEEEECCCC
T ss_pred             ccccccccceeeeeccccccccccccccccc-----------------ee-------eeechhhhhh--ccchhhccccc
Confidence            5789999999999999999999998765411                 00       0123567777  88888766543


Q ss_pred             Ccc----cHHHHHHhCCCCccEEEEeccee
Q 023110           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +..    --...++.++...-||.+|-..+
T Consensus       103 ~~~t~~li~~~~l~~mk~~ailIN~~RG~i  132 (181)
T d1qp8a1         103 NKHTRGLVKYQHLALMAEDAVFVNVGRAEV  132 (181)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred             ccccccccccceeeeccccceEEecccccc
Confidence            321    12345555665556776664443

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.62  E-value=0.016  Score=41.98  Aligned_cols=95  Identities=13%  Similarity=0.151  Sum_probs=58.0

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeE-EEEe---cCCC-hHHHHhhhh--cCCc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKG---DRKD-YDFVKSSLS--AKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~---D~~d-~~~~~~~~~--~~~~   73 (287)
                      +||+|-+|...++.+...|.+|++++|+.+...+...     ...+  .+.+ .+.-   |..+ .+.+.+..+  ..++
T Consensus        36 ~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~-----~~~~--lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~v  108 (189)
T d1gu7a2          36 NGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVA-----SLKE--LGATQVITEDQNNSREFGPTIKEWIKQSGGEA  108 (189)
T ss_dssp             SCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHH-----HHHH--HTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCE
T ss_pred             eCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHh-----hhhh--ccccEEEeccccchhHHHHHHHHHHhhccCCc
Confidence            4899999999999999999999999988765321110     0111  1222 2222   1111 112233222  2369


Q ss_pred             cEEEecCCCCcccHHHHHHhCCCCccEEEEe
Q 023110           74 DVVYDINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        74 d~vi~~a~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      |+|+++.+  .......++.++...++|.++
T Consensus       109 dvv~D~vg--~~~~~~~~~~l~~~G~~v~~G  137 (189)
T d1gu7a2         109 KLALNCVG--GKSSTGIARKLNNNGLMLTYG  137 (189)
T ss_dssp             EEEEESSC--HHHHHHHHHTSCTTCEEEECC
T ss_pred             eEEEECCC--cchhhhhhhhhcCCcEEEEEC
Confidence            99999977  445667788888556787554

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.61  E-value=0.0021  Score=45.25  Aligned_cols=20  Identities=20%  Similarity=0.370  Sum_probs=17.7

Q ss_pred             CCcccchHHHHHHHHHHcCC
Q 023110            1 MGGTRFIGVFLSRLLVKEGH   20 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~   20 (287)
                      .||||++|..|++.|.++.+
T Consensus         7 vGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           7 VGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             ETTTSHHHHHHHHHHHTCCS
T ss_pred             ECCCcHHHHHHHHHHHcCCC
Confidence            49999999999999988754

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=95.60  E-value=0.0026  Score=45.36  Aligned_cols=88  Identities=18%  Similarity=0.192  Sum_probs=54.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhh---hcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL---SAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~---~~~~~d~vi   77 (287)
                      +||+|-+|...++.+...|.+|++++++.++.. .++        +  .+.+.+. |.  .+...+.+   ...++|+||
T Consensus        30 ~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~-~~~--------~--lGad~vi-~~--~~~~~~~~~~~~~~gvd~vi   95 (167)
T d1tt7a2          30 TGATGGVGGIAVSMLNKRGYDVVASTGNREAAD-YLK--------Q--LGASEVI-SR--EDVYDGTLKALSKQQWQGAV   95 (167)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH-HHH--------H--HTCSEEE-EH--HHHCSSCCCSSCCCCEEEEE
T ss_pred             eCCcchHHHHHHHHHHHcCCceEEEecCHHHHH-HHH--------h--hcccceE-ec--cchhchhhhcccCCCceEEE
Confidence            489999999999999999999999999987632 111        1  1222221 11  11111112   223799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEe
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      ++.+  .......++.++...+++.++
T Consensus        96 d~vg--g~~~~~~~~~l~~~G~iv~~G  120 (167)
T d1tt7a2          96 DPVG--GKQLASLLSKIQYGGSVAVSG  120 (167)
T ss_dssp             ESCC--THHHHHHHTTEEEEEEEEECC
T ss_pred             ecCc--HHHHHHHHHHhccCceEEEee
Confidence            9876  334455666666445666544

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.53  E-value=0.00081  Score=49.35  Aligned_cols=102  Identities=16%  Similarity=0.217  Sum_probs=58.1

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhh-cCCe-----------EEEEecCCChHHHHhhhhc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKI-----------LHLKGDRKDYDFVKSSLSA   70 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~-----------~~i~~D~~d~~~~~~~~~~   70 (287)
                      |+|.+|+.++..++..|++|+++++++.......... ...+... ..+.           .-....+.-..++.++++ 
T Consensus        11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i-~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~d~~~a~~-   88 (192)
T d1f0ya2          11 GGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGI-EESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVH-   88 (192)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-HHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHHHHTT-
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhH-HHHHHHHHHhhhhccchhhHHHHHHHHhhccccchhHhhhc-
Confidence            4699999999999999999999999986522111000 0000000 0000           000000111123455666 


Q ss_pred             CCccEEEecCCCCcccHHHHHHhCC--CCccEEEEecce
Q 023110           71 KGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAG  107 (287)
Q Consensus        71 ~~~d~vi~~a~~~~~~~~~ll~~~~--~~~~~i~~Ss~~  107 (287)
                       ++|.|+-+..-+...-+.++..+.  -....|+.|+.+
T Consensus        89 -~ad~ViEav~E~l~~K~~v~~~l~~~~~~~~ilasnTS  126 (192)
T d1f0ya2          89 -STDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTS  126 (192)
T ss_dssp             -SCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCS
T ss_pred             -ccceehhhcccchhHHHHHHHHHhhhcccCceeeccCc
Confidence             899999998777776667777665  223455555544

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.46  E-value=0.014  Score=41.14  Aligned_cols=30  Identities=30%  Similarity=0.451  Sum_probs=27.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~   32 (287)
                      |+|.+|+.++..|.+.|++|.++.|++...
T Consensus         7 GaG~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           7 GCGALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             CcCHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            349999999999999999999999998763

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=95.36  E-value=0.065  Score=37.69  Aligned_cols=91  Identities=12%  Similarity=0.088  Sum_probs=57.1

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecC--CChHHHHhhhh---cCCccEEE
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR--KDYDFVKSSLS---AKGFDVVY   77 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~--~d~~~~~~~~~---~~~~d~vi   77 (287)
                      |+|.+|...++.+...|.+|+++++++.+.. ..+        ++.... .+..|.  .+...+.+.++   ..++|+||
T Consensus        34 G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~-~a~--------~~ga~~-~~~~~~~~~~~~~~~~~~~~~~g~g~D~vi  103 (170)
T d1e3ja2          34 GAGPIGLVSVLAAKAYGAFVVCTARSPRRLE-VAK--------NCGADV-TLVVDPAKEEESSIIERIRSAIGDLPNVTI  103 (170)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHH--------HTTCSE-EEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred             cccccchhhHhhHhhhcccccccchHHHHHH-HHH--------HcCCcE-EEeccccccccchhhhhhhcccccCCceee
Confidence            4789999999999889999999999877632 111        001122 223332  23333433333   23799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEe
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      .+++. .......++.++...+++.++
T Consensus       104 d~~g~-~~~~~~a~~~~~~~G~iv~~G  129 (170)
T d1e3ja2         104 DCSGN-EKCITIGINITRTGGTLMLVG  129 (170)
T ss_dssp             ECSCC-HHHHHHHHHHSCTTCEEEECS
T ss_pred             ecCCC-hHHHHHHHHHHhcCCceEEEe
Confidence            99873 234566778888556777665

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.18  E-value=0.0034  Score=39.49  Aligned_cols=63  Identities=14%  Similarity=0.035  Sum_probs=42.1

Q ss_pred             CcccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      ||+|.-|  |++.|.++|++|.+-++..+...+.|.          ..++.+..+  .+++.    ++  ++|.||...+
T Consensus        10 gG~GMs~--LA~~L~~~G~~VsGSD~~~~~~t~~L~----------~~Gi~i~~g--h~~~~----i~--~~d~vV~SsA   69 (89)
T d1j6ua1          10 GGIGMSA--VALHEFSNGNDVYGSNIEETERTAYLR----------KLGIPIFVP--HSADN----WY--DPDLVIKTPA   69 (89)
T ss_dssp             TSHHHHH--HHHHHHHTTCEEEEECSSCCHHHHHHH----------HTTCCEESS--CCTTS----CC--CCSEEEECTT
T ss_pred             CHHHHHH--HHHHHHhCCCeEEEEeCCCChhHHHHH----------HCCCeEEee--ecccc----cC--CCCEEEEecC
Confidence            5555544  899999999999999988755333333          346666544  23332    23  7899999888


Q ss_pred             CCc
Q 023110           82 REA   84 (287)
Q Consensus        82 ~~~   84 (287)
                      ...
T Consensus        70 I~~   72 (89)
T d1j6ua1          70 VRD   72 (89)
T ss_dssp             CCT
T ss_pred             cCC
Confidence            643

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.17  E-value=0.043  Score=36.80  Aligned_cols=26  Identities=19%  Similarity=0.423  Sum_probs=22.4

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFT   26 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~   26 (287)
                      .|++|.+|+.+.+.+.+.|+++.+..
T Consensus         6 ~G~~GrMG~~i~~~~~~~~~~l~~~i   31 (128)
T d1vm6a3           6 VGYSGRMGQEIQKVFSEKGHELVLKV   31 (128)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             ECCCCHHHHHHHHHHhcCCCeEEEEE
Confidence            48999999999999999999887643

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=95.14  E-value=0.0061  Score=44.08  Aligned_cols=27  Identities=22%  Similarity=0.517  Sum_probs=22.1

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEc
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTR   27 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r   27 (287)
                      .||||++|+.|++.|.++. .++..+..
T Consensus        11 lGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1          11 LGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             ESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             ECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            4999999999999999974 56666653

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.13  E-value=0.029  Score=40.39  Aligned_cols=95  Identities=14%  Similarity=0.176  Sum_probs=52.7

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEE-EEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh---HHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~~~~~~~~~~~d~v   76 (287)
                      +||+|-+|+..++.+...|.++++ .+++.+.......          ..+.+. ..|..+.   +.+.++- ..++|+|
T Consensus        37 ~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~----------~~gad~-vi~~~~~~~~~~~~~~~-~~GvDvv  104 (187)
T d1vj1a2          37 SGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTS----------ELGFDA-AVNYKTGNVAEQLREAC-PGGVDVY  104 (187)
T ss_dssp             SSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHH----------HSCCSE-EEETTSSCHHHHHHHHC-TTCEEEE
T ss_pred             ECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhh----------cccceE-EeeccchhHHHHHHHHh-ccCceEE
Confidence            589999999999999999976554 4554433211110          112222 2244332   2233332 3589999


Q ss_pred             EecCCCCcccHHHHHHhCCCCccEEEEecceee
Q 023110           77 YDINGREADEVEPILDALPNLEQFIYCSSAGVY  109 (287)
Q Consensus        77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~v~  109 (287)
                      +++.|  .......++.++...+++.++...-|
T Consensus       105 ~D~vG--g~~~~~~~~~l~~~G~iv~~G~~s~~  135 (187)
T d1vj1a2         105 FDNVG--GDISNTVISQMNENSHIILCGQISQY  135 (187)
T ss_dssp             EESSC--HHHHHHHHTTEEEEEEEEEC------
T ss_pred             EecCC--chhHHHHhhhccccccEEEecccccc
Confidence            99987  34455566666644578777655543

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.08  E-value=0.011  Score=35.80  Aligned_cols=31  Identities=26%  Similarity=0.251  Sum_probs=28.5

Q ss_pred             CCcccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      +||+|-+|...++.+...|++|+++++++++
T Consensus        38 ~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          38 TGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             EeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            5899999999999999999999999998766

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.98  E-value=0.0038  Score=44.51  Aligned_cols=88  Identities=13%  Similarity=0.071  Sum_probs=52.8

Q ss_pred             ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCCC
Q 023110            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~~   83 (287)
                      +|.+|...++.+...|.+|+++++++.+.. ..+        +  -+++.+.....+.+..+...+  ++|+++.+.+..
T Consensus        36 aG~vG~~a~q~ak~~G~~vi~~~~~~~k~~-~a~--------~--lGa~~~i~~~~~~~~~~~~~~--~~d~vi~~~~~~  102 (168)
T d1piwa2          36 LGGIGSMGTLISKAMGAETYVISRSSRKRE-DAM--------K--MGADHYIATLEEGDWGEKYFD--TFDLIVVCASSL  102 (168)
T ss_dssp             CSHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHH--------H--HTCSEEEEGGGTSCHHHHSCS--CEEEEEECCSCS
T ss_pred             CCCcchhHHHHhhhccccccccccchhHHH-Hhh--------c--cCCcEEeeccchHHHHHhhhc--ccceEEEEecCC
Confidence            489999999888888999999999877632 111        1  123322222223344444444  899999987654


Q ss_pred             ccc-HHHHHHhCCCCccEEEEe
Q 023110           84 ADE-VEPILDALPNLEQFIYCS  104 (287)
Q Consensus        84 ~~~-~~~ll~~~~~~~~~i~~S  104 (287)
                      ... ....++.++...+++.++
T Consensus       103 ~~~~~~~~~~~l~~~G~iv~~G  124 (168)
T d1piwa2         103 TDIDFNIMPKAMKVGGRIVSIS  124 (168)
T ss_dssp             TTCCTTTGGGGEEEEEEEEECC
T ss_pred             ccchHHHHHHHhhccceEEEec
Confidence            332 233455555334666554

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.89  E-value=0.028  Score=40.91  Aligned_cols=29  Identities=24%  Similarity=0.395  Sum_probs=25.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.||+.+++.|...|.+|++.++....
T Consensus        50 G~G~IG~~va~~l~~fg~~V~~~d~~~~~   78 (197)
T d1j4aa1          50 GTGHIGQVFMQIMEGFGAKVITYDIFRNP   78 (197)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             cccccchhHHHhHhhhcccccccCccccc
Confidence            67999999999999999999999876543

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.88  E-value=0.0067  Score=42.34  Aligned_cols=29  Identities=24%  Similarity=0.315  Sum_probs=26.1

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|+.+++.|+++|++|++.+++.+.
T Consensus         7 G~G~mG~~ia~~l~~~g~~v~~~~~~~~~   35 (152)
T d1i36a2           7 GFGEVAQTLASRLRSRGVEVVTSLEGRSP   35 (152)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEECCTTCCH
T ss_pred             cHHHHHHHHHHHHHHCCCeEEEEcCchhH
Confidence            57999999999999999999998877665

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=94.87  E-value=0.0056  Score=43.25  Aligned_cols=87  Identities=13%  Similarity=0.111  Sum_probs=49.8

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEE-cCCcccc-ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFT-RGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~-r~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      .|++|.+|+.+++.+.+. +.++.+.. |...... ..+......    ...++. +..|      +..+++  .+|+||
T Consensus        10 ~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~----~~~~~~-~~~~------~~~~~~--~~DViI   76 (162)
T d1diha1          10 AGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGA----GKTGVT-VQSS------LDAVKD--DFDVFI   76 (162)
T ss_dssp             TTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSS----SCCSCC-EESC------STTTTT--SCSEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhcc----ccCCce-eecc------HHHHhc--ccceEE
Confidence            489999999999999886 67776654 3332211 111100000    001111 1222      234455  899999


Q ss_pred             ecCCCCcccHHHHHHhCC-CCccEEE
Q 023110           78 DINGREADEVEPILDALP-NLEQFIY  102 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~-~~~~~i~  102 (287)
                      .+..  ...+...++.|. ...++|.
T Consensus        77 DFs~--p~~~~~~~~~a~~~~~~~Vi  100 (162)
T d1diha1          77 DFTR--PEGTLNHLAFCRQHGKGMVI  100 (162)
T ss_dssp             ECSC--HHHHHHHHHHHHHTTCEEEE
T ss_pred             Eecc--HHHHHHHHHHHHhccceeEE
Confidence            9975  566777777766 5456653

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.83  E-value=0.055  Score=39.44  Aligned_cols=29  Identities=21%  Similarity=0.354  Sum_probs=26.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|++|..++..|.+.|++|++++.+...
T Consensus         7 GlG~vGl~~a~~la~~g~~V~g~D~n~~~   35 (202)
T d1mv8a2           7 GLGYVGAVCAGCLSARGHEVIGVDVSSTK   35 (202)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCHhHHHHHHHHHhCCCcEEEEeCCHHH
Confidence            68999999999999999999999987655

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.73  E-value=0.011  Score=42.37  Aligned_cols=91  Identities=18%  Similarity=0.171  Sum_probs=49.3

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCC-eEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      .||||++|+.|++.|.++. .++..+..+... -+.+.        ...+. .........+.+   .+.+  ++|+|+.
T Consensus         7 vGATGyvG~eLirlL~~HP~~ei~~l~s~~~a-G~~i~--------~~~p~~~~~~~~~~~~~~---~~~~--~~dvvf~   72 (176)
T d1vkna1           7 IGATGYTGLELVRLLKNHPEAKITYLSSRTYA-GKKLE--------EIFPSTLENSILSEFDPE---KVSK--NCDVLFT   72 (176)
T ss_dssp             ESTTSHHHHHHHHHHHHCTTEEEEEEECSTTT-TSBHH--------HHCGGGCCCCBCBCCCHH---HHHH--HCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCceEEEeeccccC-CCccc--------ccCchhhccccccccCHh---Hhcc--ccceEEE
Confidence            4999999999999999874 567666544322 11110        00000 010111122333   3344  7899998


Q ss_pred             cCCCCcccHHHHHHhCCCCccEEEEeccee
Q 023110           79 INGREADEVEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~v  108 (287)
                      +.....  ...++... ...++|=.|+..=
T Consensus        73 a~p~~~--s~~~~~~~-~~~~VIDlSadfR   99 (176)
T d1vkna1          73 ALPAGA--SYDLVREL-KGVKIIDLGADFR   99 (176)
T ss_dssp             CCSTTH--HHHHHTTC-CSCEEEESSSTTT
T ss_pred             ccccHH--HHHHHHhh-ccceEEecCcccc
Confidence            876432  33444433 3357887887653

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.71  E-value=0.0092  Score=41.24  Aligned_cols=30  Identities=27%  Similarity=0.412  Sum_probs=26.1

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCc
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKA   30 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~   30 (287)
                      +||+|.+|++++..|..++  .++..+++++.
T Consensus         6 iGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~   37 (145)
T d1hyea1           6 IGASGRVGSATALLLAKEPFMKDLVLIGREHS   37 (145)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG
T ss_pred             ECCCChHHHHHHHHHHhCCcccccccccchhh
Confidence            4889999999999999987  59999998753

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.70  E-value=0.045  Score=39.13  Aligned_cols=84  Identities=17%  Similarity=0.146  Sum_probs=52.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccc-cccCCCC-ChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGE-SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~-~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |+|..|.+++..|.+.|++|....|..+.. ...+... ....     -....-..++.-.+++.++++  ++|+||.+.
T Consensus         7 GaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~--~ad~Ii~av   79 (180)
T d1txga2           7 GAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPR-----LGVKLNGVEIFWPEQLEKCLE--NAEVVLLGV   79 (180)
T ss_dssp             SCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTT-----TTBCCCSEEEECGGGHHHHHT--TCSEEEECS
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhh-----hcchhccccccccccHHHHHh--ccchhhccc
Confidence            679999999999999999999999864431 1111000 0000     011111112234566788888  899998865


Q ss_pred             CCCcccHHHHHHhCC
Q 023110           81 GREADEVEPILDALP   95 (287)
Q Consensus        81 ~~~~~~~~~ll~~~~   95 (287)
                        .....+.+++.+.
T Consensus        80 --ps~~~~~~~~~l~   92 (180)
T d1txga2          80 --STDGVLPVMSRIL   92 (180)
T ss_dssp             --CGGGHHHHHHHHT
T ss_pred             --chhhhHHHHHhhc
Confidence              3667777777755

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=94.56  E-value=0.01  Score=40.81  Aligned_cols=72  Identities=15%  Similarity=0.097  Sum_probs=42.0

Q ss_pred             CCcccchHHHHHHHHHHcCC--eEEEEEcCCcccc-c-cCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEE
Q 023110            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIA-Q-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~--~V~~~~r~~~~~~-~-~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~v   76 (287)
                      +||+|.+|++++-.|..++.  ++..++....... + ...++  .....+........+|.   ++    ++  ++|+|
T Consensus         6 iGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl--~~~~~~~~~~~i~~~~~---~~----~~--~aDiV   74 (142)
T d1o6za1           6 VGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADT--NHGIAYDSNTRVRQGGY---ED----TA--GSDVV   74 (142)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHH--HHHHTTTCCCEEEECCG---GG----GT--TCSEE
T ss_pred             ECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecch--hhcccccCCceEeeCCH---HH----hh--hcCEE
Confidence            48899999999999999874  7888886432210 0 00000  00001123344444432   22    34  89999


Q ss_pred             EecCCCC
Q 023110           77 YDINGRE   83 (287)
Q Consensus        77 i~~a~~~   83 (287)
                      +.+||..
T Consensus        75 vitaG~~   81 (142)
T d1o6za1          75 VITAGIP   81 (142)
T ss_dssp             EECCCCC
T ss_pred             EEecccc
Confidence            9998864

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=94.46  E-value=0.011  Score=40.93  Aligned_cols=70  Identities=13%  Similarity=0.155  Sum_probs=42.4

Q ss_pred             CcccchHHHHHHHHHHcC--CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            2 GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      | +|++|..++..|+.+|  .+|+.+++++........++  ..............+|.   +    .++  ++|+|+.+
T Consensus        12 G-aG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl--~~a~~~~~~~~~~~~d~---~----~~~--~adivvit   79 (146)
T d1ez4a1          12 G-DGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDL--EDAQAFTAPKKIYSGEY---S----DCK--DADLVVIT   79 (146)
T ss_dssp             C-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHH--HGGGGGSCCCEEEECCG---G----GGT--TCSEEEEC
T ss_pred             C-CCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHH--hccccccCCceEeeccH---H----Hhc--cccEEEEe
Confidence            6 5999999999999987  68999998865421100000  00000122334444443   2    244  89999999


Q ss_pred             CCCC
Q 023110           80 NGRE   83 (287)
Q Consensus        80 a~~~   83 (287)
                      +|..
T Consensus        80 ag~~   83 (146)
T d1ez4a1          80 AGAP   83 (146)
T ss_dssp             CCC-
T ss_pred             cccc
Confidence            8874

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.43  E-value=0.023  Score=40.74  Aligned_cols=27  Identities=19%  Similarity=0.322  Sum_probs=22.3

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEEc
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTR   27 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~r   27 (287)
                      .|||||+|+.|++.|.++ ..+|..+..
T Consensus         7 iGATGyvG~eLlrlL~~HP~~ei~~l~~   34 (179)
T d2g17a1           7 VGASGYAGAELVSYVNRHPHMTITALTV   34 (179)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTEEEEEEEE
T ss_pred             ECcccHHHHHHHHHHHhCCCCceEeeEe
Confidence            499999999999999998 567766543

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.38  E-value=0.013  Score=40.84  Aligned_cols=78  Identities=12%  Similarity=0.053  Sum_probs=50.2

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|.+|+++++.|.+.|++|++..|+.++.. .+.       .+  .++..       ..+..++++  ++|+||-+.- 
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~-~l~-------~~--~g~~~-------~~~~~~~~~--~~dvIilavk-   66 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSK-EIA-------EQ--LALPY-------AMSHQDLID--QVDLVILGIK-   66 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHH-HHH-------HH--HTCCB-------CSSHHHHHH--TCSEEEECSC-
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHH-hhc-------cc--cceee-------echhhhhhh--ccceeeeecc-
Confidence            6899999999999999999999998866532 111       00  12211       113455666  8999997753 


Q ss_pred             CcccHHHHHHhCCCCccEE
Q 023110           83 EADEVEPILDALPNLEQFI  101 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i  101 (287)
                       ......+++.+...+.+|
T Consensus        67 -p~~~~~vl~~l~~~~~ii   84 (152)
T d2ahra2          67 -PQLFETVLKPLHFKQPII   84 (152)
T ss_dssp             -GGGHHHHHTTSCCCSCEE
T ss_pred             -hHhHHHHhhhcccceeEe
Confidence             445566666655433333

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=94.36  E-value=0.067  Score=33.49  Aligned_cols=64  Identities=16%  Similarity=0.260  Sum_probs=42.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcccc-ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |-|-.|.++++.|.++|++|++.+.+..... +.+.           ....++.+.. +.+    .+.  ++|.||-.-|
T Consensus        12 GlG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~-----------~~~~~~~~~~-~~~----~~~--~~d~vi~SPG   73 (93)
T d2jfga1          12 GLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-----------EAVERHTGSL-NDE----WLM--AADLIVASPG   73 (93)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSC-----------TTSCEEESBC-CHH----HHH--HCSEEEECTT
T ss_pred             eECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHh-----------hccceeeccc-chh----hhc--cCCEEEECCC
Confidence            3477899999999999999999998765422 2221           3444444443 222    234  7899998877


Q ss_pred             CCc
Q 023110           82 REA   84 (287)
Q Consensus        82 ~~~   84 (287)
                      ...
T Consensus        74 i~~   76 (93)
T d2jfga1          74 IAL   76 (93)
T ss_dssp             SCT
T ss_pred             CCC
Confidence            643

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.22  E-value=0.17  Score=35.52  Aligned_cols=90  Identities=11%  Similarity=0.081  Sum_probs=57.6

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeE-EEEecCCChHHHHhhhh---cCCccEEE
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKDYDFVKSSLS---AKGFDVVY   77 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~D~~d~~~~~~~~~---~~~~d~vi   77 (287)
                      |.|.+|...++.+...|. +|+++++++.+.. ..+          .-+++ .+..+-.+.....+.++   ..++|+||
T Consensus        34 G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~-~a~----------~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvi  102 (171)
T d1pl8a2          34 GAGPIGMVTLLVAKAMGAAQVVVTDLSATRLS-KAK----------EIGADLVLQISKESPQEIARKVEGQLGCKPEVTI  102 (171)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HHH----------HTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred             CCCccHHHHHHHHHHcCCceEEeccCCHHHHH-HHH----------HhCCcccccccccccccccccccccCCCCceEEE
Confidence            459999999999999998 7999998876632 111          11332 33333344444444332   24799999


Q ss_pred             ecCCCCcccHHHHHHhCCCCccEEEEe
Q 023110           78 DINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      .+.|. .......++.++...++++++
T Consensus       103 d~~G~-~~~~~~a~~~~~~gG~iv~~G  128 (171)
T d1pl8a2         103 ECTGA-EASIQAGIYATRSGGTLVLVG  128 (171)
T ss_dssp             ECSCC-HHHHHHHHHHSCTTCEEEECS
T ss_pred             eccCC-chhHHHHHHHhcCCCEEEEEe
Confidence            99874 334556677777556777665

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.06  E-value=0.038  Score=39.76  Aligned_cols=29  Identities=10%  Similarity=0.138  Sum_probs=26.5

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |+|.+|+.++..++..|++|+++++++..
T Consensus        11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (186)
T d1wdka3          11 GAGIMGGGIAYQSASKGTPILMKDINEHG   39 (186)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            46999999999999999999999998765

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.95  E-value=0.072  Score=38.32  Aligned_cols=29  Identities=24%  Similarity=0.219  Sum_probs=25.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.||+.+++.|...|.+|++.++....
T Consensus        51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~   79 (188)
T d1sc6a1          51 GYGHIGTQLGILAESLGMYVYFYDIENKL   79 (188)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCC
T ss_pred             ecccchhhhhhhcccccceEeeccccccc
Confidence            67999999999999999999999986543

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.89  E-value=0.076  Score=38.57  Aligned_cols=79  Identities=15%  Similarity=0.057  Sum_probs=49.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-||+.+++.|...|.+|++.++......              ...+.        ..++.++++  .+|+|+.+...
T Consensus        52 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~--------------~~~~~--------~~~l~~l~~--~~D~v~~~~pl  107 (199)
T d1dxya1          52 GTGHIGQVAIKLFKGFGAKVIAYDPYPMKGD--------------HPDFD--------YVSLEDLFK--QSDVIDLHVPG  107 (199)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSSC--------------CTTCE--------ECCHHHHHH--HCSEEEECCCC
T ss_pred             ecccccccccccccccceeeeccCCccchhh--------------hcchh--------HHHHHHHHH--hcccceeeecc
Confidence            6799999999999999999999998754411              01111        123566676  67877655433


Q ss_pred             Ccc----cHHHHHHhCCCCccEEEEec
Q 023110           83 EAD----EVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~----~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      +..    --...++.++...-+|.+|=
T Consensus       108 t~~T~~li~~~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1         108 IEQNTHIINEAAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             CGGGTTSBCHHHHHHSCTTEEEEECSC
T ss_pred             cccccccccHHHhhccCCceEEEeccc
Confidence            221    12345566665556666653

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=93.79  E-value=0.032  Score=39.40  Aligned_cols=86  Identities=14%  Similarity=0.125  Sum_probs=56.3

Q ss_pred             ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCCC
Q 023110            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~~   83 (287)
                      +|.+|...++.+...|.++++++++.++.. ..+        +  -+.+. ..|..+.+......+  ++|++|.+.+..
T Consensus        39 aG~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~--------~--lGad~-~i~~~~~~~~~~~~~--~~D~vid~~g~~  104 (168)
T d1uufa2          39 IGGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAK--------A--LGADE-VVNSRNADEMAAHLK--SFDFILNTVAAP  104 (168)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHH--------H--HTCSE-EEETTCHHHHHTTTT--CEEEEEECCSSC
T ss_pred             cchHHHHHHHHhhcccccchhhccchhHHH-HHh--------c--cCCcE-EEECchhhHHHHhcC--CCceeeeeeecc
Confidence            488999999999889999999998876531 111        1  12222 246666666666665  899999998743


Q ss_pred             cccHHHHHHhCCCCccEEEEe
Q 023110           84 ADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        84 ~~~~~~ll~~~~~~~~~i~~S  104 (287)
                       ......++.++...+++.++
T Consensus       105 -~~~~~~~~~l~~~G~iv~~G  124 (168)
T d1uufa2         105 -HNLDDFTTLLKRDGTMTLVG  124 (168)
T ss_dssp             -CCHHHHHTTEEEEEEEEECC
T ss_pred             -hhHHHHHHHHhcCCEEEEec
Confidence             23445556665445666554

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=93.67  E-value=0.11  Score=36.94  Aligned_cols=89  Identities=12%  Similarity=0.116  Sum_probs=54.1

Q ss_pred             CcccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCC--ChHH----HHhhhhcCCcc
Q 023110            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--DYDF----VKSSLSAKGFD   74 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~--d~~~----~~~~~~~~~~d   74 (287)
                      |+ |.+|...++.+...|. +|+++++++.+.. ..+        +  -+.+.+ .|..  +..+    +.+.....++|
T Consensus        36 Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~-~a~--------~--lGa~~v-i~~~~~~~~~~~~~i~~~~~~~g~D  102 (182)
T d1vj0a2          36 GA-GPLGLFGVVIARSLGAENVIVIAGSPNRLK-LAE--------E--IGADLT-LNRRETSVEERRKAIMDITHGRGAD  102 (182)
T ss_dssp             CC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHH-HHH--------H--TTCSEE-EETTTSCHHHHHHHHHHHTTTSCEE
T ss_pred             CC-Cccchhheeccccccccccccccccccccc-ccc--------c--ccceEE-EeccccchHHHHHHHHHhhCCCCce
Confidence            54 8999999999999997 7999999877631 111        1  122221 2333  2222    22333334799


Q ss_pred             EEEecCCCCcccHHHHHHhCCCCccEEEEe
Q 023110           75 VVYDINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        75 ~vi~~a~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      +||.+.|.. ......++.++...+++.++
T Consensus       103 vvid~vG~~-~~~~~a~~~l~~~G~iv~~G  131 (182)
T d1vj0a2         103 FILEATGDS-RALLEGSELLRRGGFYSVAG  131 (182)
T ss_dssp             EEEECSSCT-THHHHHHHHEEEEEEEEECC
T ss_pred             EEeecCCch-hHHHHHHHHhcCCCEEEEEe
Confidence            999998752 33455677776435666554

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=93.59  E-value=0.054  Score=38.46  Aligned_cols=89  Identities=13%  Similarity=0.041  Sum_probs=54.7

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC---hHHHHhhhhcCCccEEEe
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d---~~~~~~~~~~~~~d~vi~   78 (287)
                      |+|.+|...++.+...|. +|+++++++.+.. ..+        + ..-.+++  |..+   .+.+.+.....++|+||.
T Consensus        35 GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~-~a~--------~-lGa~~~i--~~~~~~~~~~v~~~t~g~G~D~vid  102 (174)
T d1jqba2          35 GIGAVGLMGIAGAKLRGAGRIIGVGSRPICVE-AAK--------F-YGATDIL--NYKNGHIEDQVMKLTNGKGVDRVIM  102 (174)
T ss_dssp             CCSHHHHHHHHHHHTTTCSCEEEECCCHHHHH-HHH--------H-HTCSEEE--CGGGSCHHHHHHHHTTTSCEEEEEE
T ss_pred             cCCcchhhhhhhhhcccccccccccchhhhHH-HHH--------h-hCccccc--cccchhHHHHHHHHhhccCcceEEE
Confidence            359999999999998896 7999998876521 111        0 1112222  3333   233444444457999999


Q ss_pred             cCCCCcccHHHHHHhCCCCccEEEEe
Q 023110           79 INGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      +++.. ......++.++...+++.++
T Consensus       103 ~~g~~-~~~~~a~~~~~~~G~iv~~G  127 (174)
T d1jqba2         103 AGGGS-ETLSQAVKMVKPGGIISNIN  127 (174)
T ss_dssp             CSSCT-THHHHHHHHEEEEEEEEECC
T ss_pred             ccCCH-HHHHHHHHHHhcCCEEEEEe
Confidence            98853 33455667776545776655

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.44  E-value=0.033  Score=37.36  Aligned_cols=66  Identities=15%  Similarity=0.038  Sum_probs=48.5

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |-|-+|+.+++.|.  +++|.++..++...... .          ..++.++.||.++++.|.++-- .+++.++-+...
T Consensus         7 G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~-~----------~~~~~~i~Gd~~~~~~L~~a~i-~~A~~vi~~~~~   72 (129)
T d2fy8a1           7 GWSESTLECLRELR--GSEVFVLAEDENVRKKV-L----------RSGANFVHGDPTRVSDLEKANV-RGARAVIVNLES   72 (129)
T ss_dssp             SCCHHHHHHHHTSC--GGGEEEEESCTTHHHHH-H----------HTTCEEEESCTTSHHHHHHTTC-TTCSEEEECCSS
T ss_pred             CCCHHHHHHHHHHc--CCCCEEEEcchHHHHHH-H----------hcCccccccccCCHHHHHHhhh-hcCcEEEEeccc
Confidence            45789999999984  67788888877653211 1          3688999999999998876532 278888877643

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.37  E-value=0.14  Score=35.04  Aligned_cols=29  Identities=28%  Similarity=0.462  Sum_probs=22.9

Q ss_pred             CCcccchHHHHHHHHHHc---CCeEEEEEcCC
Q 023110            1 MGGTRFIGVFLSRLLVKE---GHQVTLFTRGK   29 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~---g~~V~~~~r~~   29 (287)
                      +|++|.+|++++-.|..+   ..++..++..+
T Consensus         6 iGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~   37 (145)
T d2cmda1           6 LGAAGGIGQALALLLKTQLPSGSELSLYDIAP   37 (145)
T ss_dssp             ETTTSHHHHHHHHHHHHHSCTTCEEEEECSST
T ss_pred             EcCCChHHHHHHHHHHhCCCCCcEEEEecccc
Confidence            488999999999887643   47899888654

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=93.28  E-value=0.14  Score=36.52  Aligned_cols=75  Identities=16%  Similarity=0.130  Sum_probs=51.1

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |+|..|++++..|.+.|. +++++.|+++...+... +. ..+. ..-.......++.+.+.+...+.  .+|.|||+..
T Consensus        25 GaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~-l~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~diiIN~Tp   99 (182)
T d1vi2a1          25 GAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALA-FA-QRVN-ENTDCVVTVTDLADQQAFAEALA--SADILTNGTK   99 (182)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHH-HH-HHHH-HHSSCEEEEEETTCHHHHHHHHH--TCSEEEECSS
T ss_pred             CCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHH-HH-HHHH-hhcCcceEeeecccccchhhhhc--ccceeccccC
Confidence            568889999999999986 78888898765321110 00 0010 01234456788888888888887  8999999975


Q ss_pred             C
Q 023110           82 R   82 (287)
Q Consensus        82 ~   82 (287)
                      .
T Consensus       100 ~  100 (182)
T d1vi2a1         100 V  100 (182)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=92.96  E-value=0.013  Score=41.16  Aligned_cols=63  Identities=17%  Similarity=0.130  Sum_probs=43.3

Q ss_pred             ccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      +|-+|+.+++.|...|. +|++..|+..+......        +  -+...     .+-+++.+.+.  ++|+||.+.+.
T Consensus        32 aG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~--------~--~~~~~-----~~~~~~~~~l~--~~Divi~atss   94 (159)
T d1gpja2          32 AGEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR--------D--LGGEA-----VRFDELVDHLA--RSDVVVSATAA   94 (159)
T ss_dssp             CCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH--------H--HTCEE-----CCGGGHHHHHH--TCSEEEECCSS
T ss_pred             CCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHH--------h--hhccc-----ccchhHHHHhc--cCCEEEEecCC
Confidence            49999999999999997 68888888655221111        0  12222     23456777787  89999999765


Q ss_pred             C
Q 023110           83 E   83 (287)
Q Consensus        83 ~   83 (287)
                      .
T Consensus        95 ~   95 (159)
T d1gpja2          95 P   95 (159)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=92.87  E-value=0.038  Score=40.00  Aligned_cols=29  Identities=14%  Similarity=0.095  Sum_probs=25.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|-||+.+++.|...|.+|.+.++....
T Consensus        56 G~G~IG~~va~~l~~fg~~v~~~d~~~~~   84 (193)
T d1mx3a1          56 GLGRVGQAVALRAKAFGFNVLFYDPYLSD   84 (193)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECTTSCT
T ss_pred             ccccccccceeeeeccccceeeccCcccc
Confidence            57999999999999999999999887544

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.78  E-value=0.018  Score=39.85  Aligned_cols=72  Identities=15%  Similarity=0.171  Sum_probs=42.5

Q ss_pred             CCcccchHHHHHHHHHHcCC--eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      +|| |.+|++++..|..+|.  ++..++++++.......++.+. .........+...|.       +.++  ++|+||.
T Consensus        12 iGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~-~~~~~~~~~~~~~d~-------~~l~--daDvvvi   80 (148)
T d1ldna1          12 IGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDY-------DDCR--DADLVVI   80 (148)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCG-------GGTT--TCSEEEE
T ss_pred             ECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhC-ccccCCCeEEEECCH-------HHhc--cceeEEE
Confidence            365 9999999999999874  8999998765421100000000 000012344434332       2355  8999999


Q ss_pred             cCCCC
Q 023110           79 INGRE   83 (287)
Q Consensus        79 ~a~~~   83 (287)
                      +++..
T Consensus        81 tag~~   85 (148)
T d1ldna1          81 CAGAN   85 (148)
T ss_dssp             CCSCC
T ss_pred             ecccc
Confidence            98874

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=92.71  E-value=0.053  Score=38.19  Aligned_cols=29  Identities=17%  Similarity=0.368  Sum_probs=25.1

Q ss_pred             cccchHHHHHHHHHHcCC--eEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGH--QVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~--~V~~~~r~~~~   31 (287)
                      |.|.+|.++++.|.+.|+  +|++.+|+++.
T Consensus         8 G~G~mG~sla~~L~~~g~~~~I~~~D~~~~~   38 (171)
T d2g5ca2           8 GVGFMGGSFAKSLRRSGFKGKIYGYDINPES   38 (171)
T ss_dssp             SCSHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             ccCHHHHHHHHHHHhcCCCeEEEEEECChHH
Confidence            579999999999999985  78888888765

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=92.47  E-value=0.028  Score=38.51  Aligned_cols=71  Identities=18%  Similarity=0.248  Sum_probs=38.9

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      .|+ |.+|++++-.|+.++  .++..+++++........++.+  -...........+   +.    +.++  ++|+|+.
T Consensus         7 IGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~--~~~~~~~~~~~~~---~~----~~~~--~adivvi   74 (142)
T d1y6ja1           7 IGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINH--GLPFMGQMSLYAG---DY----SDVK--DCDVIVV   74 (142)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTT--SCCCTTCEEEC-----CG----GGGT--TCSEEEE
T ss_pred             ECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeecc--CcccCCCeeEeeC---cH----HHhC--CCceEEE
Confidence            365 999999999999986  4899999887652110000000  0000122332222   22    2345  8999999


Q ss_pred             cCCCC
Q 023110           79 INGRE   83 (287)
Q Consensus        79 ~a~~~   83 (287)
                      ++|..
T Consensus        75 tag~~   79 (142)
T d1y6ja1          75 TAGAN   79 (142)
T ss_dssp             CCCC-
T ss_pred             ecccc
Confidence            99874

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.26  E-value=0.18  Score=35.28  Aligned_cols=90  Identities=12%  Similarity=0.170  Sum_probs=53.0

Q ss_pred             CCcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCe-EEEEecCCChHHHHhhhh---cCCccE
Q 023110            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLS---AKGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~D~~d~~~~~~~~~---~~~~d~   75 (287)
                      +|++|.+|...++.+...| .+|++.++++.+.. ..+        +  -++ ..+  |..+.+..++..+   ..++|+
T Consensus        34 ~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~-~~~--------~--~Ga~~~i--~~~~~~~~~~~~~~~~~~~~d~  100 (170)
T d1jvba2          34 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVE-AAK--------R--AGADYVI--NASMQDPLAEIRRITESKGVDA  100 (170)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHH-HHH--------H--HTCSEEE--ETTTSCHHHHHHHHTTTSCEEE
T ss_pred             EeccccceeeeeecccccccccccccccchhhHH-HHH--------H--cCCceee--ccCCcCHHHHHHHHhhcccchh
Confidence            4789999999999999888 48888888866521 111        1  122 233  3334333333332   346999


Q ss_pred             EEecCCCCcccHHHHHHhCCCCccEEEEe
Q 023110           76 VYDINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        76 vi~~a~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      ||.+++. .......++.++...+++.++
T Consensus       101 vid~~g~-~~~~~~a~~~l~~~G~iv~~G  128 (170)
T d1jvba2         101 VIDLNNS-EKTLSVYPKALAKQGKYVMVG  128 (170)
T ss_dssp             EEESCCC-HHHHTTGGGGEEEEEEEEECC
T ss_pred             hhccccc-chHHHhhhhhcccCCEEEEec
Confidence            9999863 222233445555334666554

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=92.25  E-value=0.05  Score=38.70  Aligned_cols=18  Identities=22%  Similarity=0.169  Sum_probs=16.3

Q ss_pred             CCcccchHHHHHHHHHHc
Q 023110            1 MGGTRFIGVFLSRLLVKE   18 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~   18 (287)
                      +||+|.||++++-.|.+.
T Consensus        30 ~GA~G~Ig~~l~~~La~g   47 (175)
T d7mdha1          30 SGAAGMISNHLLFKLASG   47 (175)
T ss_dssp             ETTTSHHHHHHHHHHHHT
T ss_pred             ECCCcHHHHHHHHHHHcC
Confidence            699999999999999874

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=92.12  E-value=0.052  Score=37.11  Aligned_cols=73  Identities=12%  Similarity=0.038  Sum_probs=43.0

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      +|| |.+|++++..|...+  .++..++.++.........+.. ..........+...  .+.+    .++  ++|+|+-
T Consensus         6 IGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~-~~~~~~~~~~i~~~--~~~~----~~~--dadvvvi   75 (142)
T d1guza1           6 IGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYE-SGPVGLFDTKVTGS--NDYA----DTA--NSDIVII   75 (142)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHT-THHHHTCCCEEEEE--SCGG----GGT--TCSEEEE
T ss_pred             ECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhc-ccchhcccceEEec--CCHH----Hhc--CCeEEEE
Confidence            375 999999999999986  5999999887653211000000 00001123333322  2232    345  8999999


Q ss_pred             cCCCC
Q 023110           79 INGRE   83 (287)
Q Consensus        79 ~a~~~   83 (287)
                      ++|..
T Consensus        76 tag~~   80 (142)
T d1guza1          76 TAGLP   80 (142)
T ss_dssp             CCSCC
T ss_pred             EEecC
Confidence            99863

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.11  E-value=0.033  Score=39.74  Aligned_cols=30  Identities=23%  Similarity=0.414  Sum_probs=27.3

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~   32 (287)
                      |.|.+|..+++.|++.||+|.+.+|++++.
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~   37 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKS   37 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            579999999999999999999999987763

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=92.01  E-value=0.18  Score=33.37  Aligned_cols=64  Identities=17%  Similarity=0.168  Sum_probs=49.9

Q ss_pred             chHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         6 ~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |.+.+.++.|.+.|++++.+..++.+.....            +-.+-+.......+++.++++..++|.|+-..|
T Consensus        28 y~~~~a~~alke~g~~~iliN~NP~TVstd~------------d~aD~lYfePlt~e~v~~Ii~~E~pd~il~~~G   91 (127)
T d1a9xa3          28 YSGAQACKALREEGYRVINVNSNPATIMTDP------------EMADATYIEPIHWEVVRKIIEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSCTTCGGGCG------------GGSSEEECSCCCHHHHHHHHHHHCCSEEECSSS
T ss_pred             HHHHHHHHHHHHcCCeEEEecCchHhhhcCh------------hhcceeeeecCCHHHHHHHHHHhCcCCeEEEee
Confidence            6788999999999999999999988743221            233445667778899999999889999986544

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.01  E-value=0.059  Score=38.81  Aligned_cols=29  Identities=21%  Similarity=0.229  Sum_probs=25.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.||+.+++.|...|.+|.+.++....
T Consensus        51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~   79 (188)
T d2naca1          51 AAGRIGLAVLRRLAPFDVHLHYTDRHRLP   79 (188)
T ss_dssp             CCSHHHHHHHHHHGGGTCEEEEECSSCCC
T ss_pred             cccccchhhhhhhhccCceEEEEeecccc
Confidence            67999999999999999999999987543

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=91.98  E-value=0.053  Score=39.16  Aligned_cols=29  Identities=21%  Similarity=0.220  Sum_probs=25.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.||+.+++.+...|.+|.+.++....
T Consensus        54 G~G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          54 GFGSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             ecccchHHHHHHHHhhccccccccccccc
Confidence            57999999999999999999999876553

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.95  E-value=0.42  Score=32.00  Aligned_cols=26  Identities=12%  Similarity=0.197  Sum_probs=21.0

Q ss_pred             CCcccchHHHHHHHHHHc-CCeEEEEE
Q 023110            1 MGGTRFIGVFLSRLLVKE-GHQVTLFT   26 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~-g~~V~~~~   26 (287)
                      .|++|.+|+.+++.+.+. ++++.+..
T Consensus         5 ~Ga~GrMG~~i~~~i~~~~~~~l~~~~   31 (135)
T d1yl7a1           5 LGAKGKVGATMVRAVAAADDLTLSAEL   31 (135)
T ss_dssp             ETTTSHHHHHHHHHHHHSTTSEEEEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence            489999999999998775 67776643

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.77  E-value=0.18  Score=34.75  Aligned_cols=19  Identities=21%  Similarity=0.135  Sum_probs=17.1

Q ss_pred             CCcccchHHHHHHHHHHcC
Q 023110            1 MGGTRFIGVFLSRLLVKEG   19 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g   19 (287)
                      +||+|++|++++-.|...+
T Consensus        10 iGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1          10 TGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             SSTTSHHHHHHHHHHHTTT
T ss_pred             ECCCCHHHHHHHHHHHhcc
Confidence            6999999999999999864

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=91.76  E-value=0.21  Score=34.23  Aligned_cols=95  Identities=18%  Similarity=0.166  Sum_probs=54.6

Q ss_pred             CCcccchHHHHHHHHHHc--CCeEEEEEcCCccc--ccc---CC-C---CChhh--------hhhhcCCeEEEEecCCCh
Q 023110            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI--AQQ---LP-G---ESDQE--------FAEFSSKILHLKGDRKDY   61 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~--~~~---~~-~---~~~~~--------~~~~~~~~~~i~~D~~d~   61 (287)
                      +|+||.||+..++-+.+.  .++|.+++-+.+..  .++   +. .   ..++.        +.....+++++.    ..
T Consensus         7 lGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~----g~   82 (151)
T d1q0qa2           7 LGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLS----GQ   82 (151)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEE----SH
T ss_pred             EcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhcccccccc----Ch
Confidence            599999999999999886  58999998665431  000   00 0   00000        000011223222    34


Q ss_pred             HHHHhhhhcCCccEEEecCCCCcccHHHHHHhCCCCccE
Q 023110           62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQF  100 (287)
Q Consensus        62 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~~~~~~  100 (287)
                      +.+.++....++|.|++... ...+....+.+++..+++
T Consensus        83 ~~l~~~~~~~~~D~vi~AI~-G~aGL~~t~~aik~gk~i  120 (151)
T d1q0qa2          83 QAACDMAALEDVDQVMAAIV-GAAGLLPTLAAIRAGKTI  120 (151)
T ss_dssp             HHHHHHHTCTTCCEEEECCS-SGGGHHHHHHHHHTTCEE
T ss_pred             HHHHHHhcCCCCCEEEEecC-cccHHHHHHHHHhcCCeE
Confidence            56666666567899998753 356677777776633343

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=91.62  E-value=0.1  Score=36.86  Aligned_cols=89  Identities=13%  Similarity=0.157  Sum_probs=49.7

Q ss_pred             CcccchHHHHHHHHHHcCCeEEE-EEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhh--hhcCCccEEEe
Q 023110            2 GGTRFIGVFLSRLLVKEGHQVTL-FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS--LSAKGFDVVYD   78 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~--~~~~~~d~vi~   78 (287)
                      |+ |.+|...++.+...|.+++. .++++.+. +..+        + ....+++  |..+.+..+++  +...++|+||.
T Consensus        36 G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~-~~a~--------~-~Ga~~~i--~~~~~~~~~~i~~~t~gg~D~vid  102 (174)
T d1f8fa2          36 GA-GAVGLSALLAAKVCGASIIIAVDIVESRL-ELAK--------Q-LGATHVI--NSKTQDPVAAIKEITDGGVNFALE  102 (174)
T ss_dssp             SC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH-HHHH--------H-HTCSEEE--ETTTSCHHHHHHHHTTSCEEEEEE
T ss_pred             CC-CHHHhhhhhcccccccceeeeeccHHHHH-HHHH--------H-cCCeEEE--eCCCcCHHHHHHHHcCCCCcEEEE
Confidence            54 99999999999888886654 45555442 1111        1 1122333  34443322222  22237999999


Q ss_pred             cCCCCcccHHHHHHhCCCCccEEEEe
Q 023110           79 INGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      +.+.. ......++.++...++++++
T Consensus       103 ~~G~~-~~~~~~~~~~~~~G~i~~~G  127 (174)
T d1f8fa2         103 STGSP-EILKQGVDALGILGKIAVVG  127 (174)
T ss_dssp             CSCCH-HHHHHHHHTEEEEEEEEECC
T ss_pred             cCCcH-HHHHHHHhcccCceEEEEEe
Confidence            98742 33344556666445776655

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.58  E-value=0.32  Score=31.74  Aligned_cols=64  Identities=13%  Similarity=0.044  Sum_probs=48.9

Q ss_pred             chHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         6 ~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |.+.+.++.|.+.|++++.+..++.+.....            +-..-+....-..+.+.++++..++|.|+-..|
T Consensus        25 y~~~~a~~aLk~~g~~~IliN~NPeTVstd~------------d~aD~lYfeplt~e~v~~Ii~~E~p~~ii~~~G   88 (121)
T d1a9xa4          25 YCCVHASLALREDGYETIMVNCNPETVSTDY------------DTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYG   88 (121)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCCTTSSTTST------------TSSSEEECCCCSHHHHHHHHHHHCCSEEECSSS
T ss_pred             HHHHHHHHHHHhcCCeEEEEecChhhhhcCh------------hhcCceEEccCCHHHHHHHHHHhCCCEEEeehh
Confidence            6788999999999999999999988743222            233445566678888999988889999886543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.31  E-value=0.16  Score=33.41  Aligned_cols=29  Identities=24%  Similarity=0.268  Sum_probs=26.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |+|++|-.++..|.++|.+|+.+.+.+.-
T Consensus        37 GgG~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          37 GGGVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CcchhHHHHHHHhhcccceEEEEeecccc
Confidence            78999999999999999999999998754

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.21  E-value=0.072  Score=38.17  Aligned_cols=29  Identities=21%  Similarity=0.306  Sum_probs=25.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.||+.+++.+...|.+|++.++....
T Consensus        51 G~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          51 GLGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccchhHHHHHHhhhccceEEeecCCCCh
Confidence            67999999999999999999999887654

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.21  E-value=0.076  Score=31.97  Aligned_cols=30  Identities=20%  Similarity=0.136  Sum_probs=27.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~   32 (287)
                      |+|++|+-++....+.|++|++++-+.+..
T Consensus         8 G~GQLgrMl~~Aa~~LG~~v~vldp~~~~p   37 (78)
T d3etja2           8 GNGQLGRMLRQAGEPLGIAVWPVGLDAEPA   37 (78)
T ss_dssp             BCSHHHHHHHHHHGGGTEEEEEECTTSCGG
T ss_pred             cCCHHHHHHHHHHHHcCCEEEEEcCCCCCc
Confidence            689999999999999999999999877654

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=90.90  E-value=0.058  Score=37.80  Aligned_cols=89  Identities=13%  Similarity=0.176  Sum_probs=62.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-.|..-++.+...|.+|++++.+..... .++       ......++..   ..+.+.+.+.++  ++|+||.++-.
T Consensus        39 GaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~-~l~-------~~~~~~~~~~---~~~~~~l~~~~~--~aDivI~aali  105 (168)
T d1pjca1          39 GGGVVGTEAAKMAVGLGAQVQIFDINVERLS-YLE-------TLFGSRVELL---YSNSAEIETAVA--EADLLIGAVLV  105 (168)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHH-------HHHGGGSEEE---ECCHHHHHHHHH--TCSEEEECCCC
T ss_pred             CCChHHHHHHHHHhhCCCEEEEEeCcHHHHH-HHH-------Hhhcccceee---hhhhhhHHHhhc--cCcEEEEeeec
Confidence            5688999999999999999999999877632 111       0012334333   357778899998  99999999765


Q ss_pred             C-----cccHHHHHHhCCCCccEEEEe
Q 023110           83 E-----ADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        83 ~-----~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      .     ..-++.+++.++...-+|=+|
T Consensus       106 pG~~aP~lIt~~mv~~Mk~GSVIVDva  132 (168)
T d1pjca1         106 PGRRAPILVPASLVEQMRTGSVIVDVA  132 (168)
T ss_dssp             TTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred             CCcccCeeecHHHHhhcCCCcEEEEee
Confidence            3     334788999998544555444

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.31  E-value=0.46  Score=30.84  Aligned_cols=71  Identities=13%  Similarity=0.139  Sum_probs=43.3

Q ss_pred             cchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCCCc
Q 023110            5 RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREA   84 (287)
Q Consensus         5 G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~   84 (287)
                      +..|..+.+.|++.||+|+.+..+....                .+...       ..++.++-.  .+|.++-+..  .
T Consensus        14 ~k~g~~v~~~L~~~g~~V~pVnP~~~~i----------------~G~~~-------y~sl~~lp~--~~D~vvi~vp--~   66 (116)
T d1y81a1          14 AKYGNIILKDLLSKGFEVLPVNPNYDEI----------------EGLKC-------YRSVRELPK--DVDVIVFVVP--P   66 (116)
T ss_dssp             TSHHHHHHHHHHHTTCEEEEECTTCSEE----------------TTEEC-------BSSGGGSCT--TCCEEEECSC--H
T ss_pred             CCcHHHHHHHHHHCCCEEEEEccccccc----------------cCccc-------cccchhccc--cceEEEEEeC--H
Confidence            6789999999999999998875443331                12221       122333334  6788876643  4


Q ss_pred             ccHHHHHHhCC--CCccEEE
Q 023110           85 DEVEPILDALP--NLEQFIY  102 (287)
Q Consensus        85 ~~~~~ll~~~~--~~~~~i~  102 (287)
                      ..+..+++.+.  +.+.+++
T Consensus        67 ~~~~~~l~~~~~~g~k~v~~   86 (116)
T d1y81a1          67 KVGLQVAKEAVEAGFKKLWF   86 (116)
T ss_dssp             HHHHHHHHHHHHTTCCEEEE
T ss_pred             HHHHHHHHHHHhcCCceEEe
Confidence            55555555543  7666543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.16  E-value=0.2  Score=34.52  Aligned_cols=19  Identities=16%  Similarity=0.038  Sum_probs=16.5

Q ss_pred             CCcccchHHHHHHHHHHcC
Q 023110            1 MGGTRFIGVFLSRLLVKEG   19 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g   19 (287)
                      +||+|.+|++++-.|.+.+
T Consensus         9 iGA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           9 TGAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             SSTTSHHHHTTHHHHHTTT
T ss_pred             ECCCCHHHHHHHHHHHHHH
Confidence            5999999999999998653

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=90.01  E-value=0.71  Score=32.35  Aligned_cols=90  Identities=11%  Similarity=0.124  Sum_probs=54.3

Q ss_pred             cccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeE-EEE-ecCCC-hHHHHhhhhcCCccEEEe
Q 023110            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLK-GDRKD-YDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~i~-~D~~d-~~~~~~~~~~~~~d~vi~   78 (287)
                      |.|.+|...++.+...| .+|+++++++++.....           .-+.+ .+. -|-.+ .+.+.+.....++|++|.
T Consensus        37 G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-----------~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~  105 (176)
T d1d1ta2          37 GLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-----------AVGATECISPKDSTKPISEVLSEMTGNNVGYTFE  105 (176)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-----------HHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEE
T ss_pred             CCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-----------hcCCcEEECccccchHHHHHHHHhccccceEEEE
Confidence            46999999999999998 58999999987732111           11222 222 11111 333444455558999999


Q ss_pred             cCCCCcccHHHHHHhCC-CCccEEEEe
Q 023110           79 INGREADEVEPILDALP-NLEQFIYCS  104 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~-~~~~~i~~S  104 (287)
                      +.+... .....+..+. +..+++.++
T Consensus       106 ~~g~~~-~~~~a~~~~~~~~G~~v~vG  131 (176)
T d1d1ta2         106 VIGHLE-TMIDALASCHMNYGTSVVVG  131 (176)
T ss_dssp             CSCCHH-HHHHHHTTSCTTTCEEEECS
T ss_pred             eCCchH-HHHHHHHHhhcCCeEEEEEE
Confidence            987422 2233334444 546777666

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.92  E-value=0.3  Score=31.52  Aligned_cols=85  Identities=14%  Similarity=0.093  Sum_probs=53.2

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|..-++.|++.|.+|++++.........+..         ..+++++...+.+.+     +.  +++.|+.+.+.
T Consensus        19 G~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~d-----l~--~~~lv~~at~d   82 (113)
T d1pjqa1          19 GGGDVAERKARLLLEAGARLTVNALTFIPQFTVWAN---------EGMLTLVEGPFDETL-----LD--SCWLAIAATDD   82 (113)
T ss_dssp             CCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT---------TTSCEEEESSCCGGG-----GT--TCSEEEECCSC
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh---------cCCceeeccCCCHHH-----hC--CCcEEeecCCC
Confidence            679999999999999999999998776553221110         246777776664332     44  78888876542


Q ss_pred             CcccHHHHHHhCCCCccEEEEe
Q 023110           83 EADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        83 ~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                       ..--..+.+.++....+|++.
T Consensus        83 -~~~n~~i~~~a~~~~ilVNv~  103 (113)
T d1pjqa1          83 -DTVNQRVSDAAESRRIFCNVV  103 (113)
T ss_dssp             -HHHHHHHHHHHHHTTCEEEET
T ss_pred             -HHHHHHHHHHHHHcCCEEEeC
Confidence             222234555555334455443

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=89.87  E-value=1.6  Score=30.28  Aligned_cols=91  Identities=14%  Similarity=0.104  Sum_probs=54.3

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCC--hHHHHhhhhcCCccEEEec
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d--~~~~~~~~~~~~~d~vi~~   79 (287)
                      |.|.+|...++.+...|. +|++.++++.+.. ..+         ...-.+.+...-.+  ...........++|+||.+
T Consensus        36 G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~-~a~---------~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~  105 (174)
T d1e3ia2          36 GLGCVGLSAIIGCKIAGASRIIAIDINGEKFP-KAK---------ALGATDCLNPRELDKPVQDVITELTAGGVDYSLDC  105 (174)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHH---------HTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred             CCChHHHHHHHHHHHhCCceeeeeccchHHHH-HHH---------HhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEe
Confidence            359999999999999997 5777777766521 111         01222233322222  2334444445689999999


Q ss_pred             CCCCcccHHHHHHhCC-CCccEEEEe
Q 023110           80 NGREADEVEPILDALP-NLEQFIYCS  104 (287)
Q Consensus        80 a~~~~~~~~~ll~~~~-~~~~~i~~S  104 (287)
                      +|.. ......++.++ +..+++.++
T Consensus       106 ~G~~-~~~~~a~~~~~~g~G~~v~vG  130 (174)
T d1e3ia2         106 AGTA-QTLKAAVDCTVLGWGSCTVVG  130 (174)
T ss_dssp             SCCH-HHHHHHHHTBCTTTCEEEECC
T ss_pred             cccc-hHHHHHHHHhhcCCeEEEecC
Confidence            9842 23445566666 346777665

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=89.14  E-value=0.012  Score=41.00  Aligned_cols=81  Identities=14%  Similarity=0.087  Sum_probs=41.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|.+|+++++.|.+.++.+.+.+|++++.....+         . ...  ...+      ..++++  .+|+||-+.. 
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~---------~-~~~--~~~~------~~~~~~--~~DiVil~v~-   64 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAE---------V-YGG--KAAT------LEKHPE--LNGVVFVIVP-   64 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHH---------H-TCC--CCCS------SCCCCC-----CEEECSC-
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhh---------c-ccc--cccc------hhhhhc--cCcEEEEecc-
Confidence            68999999999886644434577787665321111         0 111  0112      223455  7898987764 


Q ss_pred             CcccHHHHHHhCC-CCccEEEEec
Q 023110           83 EADEVEPILDALP-NLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~ll~~~~-~~~~~i~~Ss  105 (287)
                       ......+++.+. +.+-+|.+|+
T Consensus        65 -d~~i~~v~~~l~~~~~ivi~~s~   87 (153)
T d2i76a2          65 -DRYIKTVANHLNLGDAVLVHCSG   87 (153)
T ss_dssp             -TTTHHHHHTTTCCSSCCEEECCS
T ss_pred             -chhhhHHHhhhcccceeeeeccc
Confidence             345566666665 4445555554

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=89.05  E-value=0.18  Score=34.33  Aligned_cols=29  Identities=17%  Similarity=0.297  Sum_probs=23.7

Q ss_pred             CcccchHHHHHHHHHHcCC-eEEEEEcCCcc
Q 023110            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAP   31 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~-~V~~~~r~~~~   31 (287)
                      |+ |.+|.+++-.|..++. ++..++.++..
T Consensus         8 Ga-G~VG~~~A~~l~~~~l~dl~l~D~~~~~   37 (142)
T d1uxja1           8 GA-GFVGSTTAHWLAAKELGDIVLLDIVEGV   37 (142)
T ss_dssp             CC-SHHHHHHHHHHHHHTCSEEEEECSSSSH
T ss_pred             CC-CHHHHHHHHHHHhCCcceEEEEeecccc
Confidence            64 9999999998888763 88888877654

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.78  E-value=0.31  Score=33.81  Aligned_cols=88  Identities=11%  Similarity=0.028  Sum_probs=50.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCe-EEEEecCCChHHHHhhhh-cCCccEEEecC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLS-AKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~D~~d~~~~~~~~~-~~~~d~vi~~a   80 (287)
                      |+|.+|...++.+...|.+|+++++++.+.. ..+          .-+. +.+  |..+.+..+.+.+ ..+.+.+|.++
T Consensus        35 GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~-~a~----------~~Ga~~~i--~~~~~~~~~~~~~~~~g~~~~i~~~  101 (166)
T d1llua2          35 GIGGLGHVAVQYARAMGLHVAAIDIDDAKLE-LAR----------KLGASLTV--NARQEDPVEAIQRDIGGAHGVLVTA  101 (166)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHH----------HTTCSEEE--ETTTSCHHHHHHHHHSSEEEEEECC
T ss_pred             eccccHHHHHHHHHHcCCccceecchhhHHH-hhh----------ccCccccc--cccchhHHHHHHHhhcCCccccccc
Confidence            4599999999988888999999999876632 111          1122 223  3333333332221 12566666665


Q ss_pred             CCCcccHHHHHHhCCCCccEEEEe
Q 023110           81 GREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        81 ~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      +. .......++.++...+++.++
T Consensus       102 ~~-~~~~~~~~~~l~~~G~iv~~G  124 (166)
T d1llua2         102 VS-NSAFGQAIGMARRGGTIALVG  124 (166)
T ss_dssp             SC-HHHHHHHHTTEEEEEEEEECC
T ss_pred             cc-chHHHHHHHHhcCCcEEEEEE
Confidence            53 233444555555445666554

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.55  E-value=0.24  Score=32.24  Aligned_cols=29  Identities=24%  Similarity=0.387  Sum_probs=26.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|++|-.++..|.+.|.+|+++.|...-
T Consensus        29 GgG~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          29 GGGYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCCccceeeeeeecccccEEEEEEeccee
Confidence            68999999999999999999999988654

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=88.52  E-value=0.061  Score=37.55  Aligned_cols=29  Identities=10%  Similarity=0.145  Sum_probs=24.9

Q ss_pred             CcccchHHHHHHHHHHcCC--eEEEEEcCCcc
Q 023110            2 GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAP   31 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~--~V~~~~r~~~~   31 (287)
                      | .|.+|++++-.|..+|.  ++..++++++.
T Consensus        27 G-aG~VG~~~A~~l~~~~l~~ElvLiD~~~~~   57 (160)
T d1i0za1          27 G-VGQVGMACAISILGKSLADELALVDVLEDK   57 (160)
T ss_dssp             C-CSHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             C-CCHHHHHHHHHHHhcCCCcEEEEEEeccch
Confidence            6 49999999999999985  89999987654

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=88.48  E-value=0.84  Score=30.61  Aligned_cols=76  Identities=11%  Similarity=0.013  Sum_probs=46.3

Q ss_pred             Ccc---cchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         2 Gat---G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |||   +..|..+++.|.+.||+|+.+.......                .+...       ..++.++-.  .+|.|+-
T Consensus        26 GaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i----------------~G~~~-------~~sl~dlp~--~iD~v~i   80 (139)
T d2d59a1          26 GASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV----------------LGRKC-------YPSVLDIPD--KIEVVDL   80 (139)
T ss_dssp             TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE----------------TTEEC-------BSSGGGCSS--CCSEEEE
T ss_pred             eecCCCCCchHHHHHHHHHCCCEEEEECCccccc----------------CCCcc-------cccccccCc--cceEEEE
Confidence            555   7889999999999999988876543331                12211       112333333  6788777


Q ss_pred             cCCCCcccHHHHHHhCC--CCccEEEEe
Q 023110           79 INGREADEVEPILDALP--NLEQFIYCS  104 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~~--~~~~~i~~S  104 (287)
                      +..  ...+..+++.+.  +.+.+++.+
T Consensus        81 ~vp--~~~~~~~~~e~~~~g~k~v~~~~  106 (139)
T d2d59a1          81 FVK--PKLTMEYVEQAIKKGAKVVWFQY  106 (139)
T ss_dssp             CSC--HHHHHHHHHHHHHHTCSEEEECT
T ss_pred             EeC--HHHHHHHHHHHHHhCCCEEEEec
Confidence            643  555566666654  776655433

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=88.22  E-value=0.094  Score=35.96  Aligned_cols=30  Identities=17%  Similarity=0.349  Sum_probs=24.7

Q ss_pred             CCcccchHHHHHHHHHHcC--CeEEEEEcCCcc
Q 023110            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~   31 (287)
                      +| +|.+|..++-.|+.+|  .+++.++.++..
T Consensus         7 IG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~   38 (146)
T d1hyha1           7 IG-LGNVGAAVAHGLIAQGVADDYVFIDANEAK   38 (146)
T ss_dssp             EC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             EC-cCHHHHHHHHHHHhcCCCceEEEEecccch
Confidence            36 5999999999999887  589998887654

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=87.92  E-value=0.41  Score=33.52  Aligned_cols=87  Identities=17%  Similarity=0.143  Sum_probs=50.3

Q ss_pred             CcccchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEE--ecCCC-hHHHHhhhhcCCccEEE
Q 023110            2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK--GDRKD-YDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~D~~d-~~~~~~~~~~~~~d~vi   77 (287)
                      |+ |-+|...+.++...| .+|+++++++.+.....           ..+.....  .+..+ ...........++|++|
T Consensus        36 Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-----------~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vi  103 (176)
T d2jhfa2          36 GL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-----------EVGATECVNPQDYKKPIQEVLTEMSNGGVDFSF  103 (176)
T ss_dssp             CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-----------HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-----------HhCCeeEEecCCchhHHHHHHHHHhcCCCCEEE
Confidence            56 568999999999987 58888888877632111           11222222  22222 23333344445899999


Q ss_pred             ecCCCCcccHHHHHHhCC-CCccEE
Q 023110           78 DINGREADEVEPILDALP-NLEQFI  101 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~-~~~~~i  101 (287)
                      .+.|.. ......++.++ +...++
T Consensus       104 d~~G~~-~~~~~a~~~~~~~~g~~~  127 (176)
T d2jhfa2         104 EVIGRL-DTMVTALSCCQEAYGVSV  127 (176)
T ss_dssp             ECSCCH-HHHHHHHHHBCTTTCEEE
T ss_pred             ecCCch-hHHHHHHHHHhcCCcceE
Confidence            998743 23344556666 333443

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.90  E-value=0.23  Score=34.45  Aligned_cols=72  Identities=10%  Similarity=-0.031  Sum_probs=50.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|++...++-...+..           .++++..        .+.+++.  ..|+|+-+.|.
T Consensus        31 GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-----------~dG~~v~--------~~~~a~~--~adivvtaTGn   89 (163)
T d1li4a1          31 GYGDVGKGCAQALRGFGARVIITEIDPINALQAA-----------MEGYEVT--------TMDEACQ--EGNIFVTTTGC   89 (163)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTCEEC--------CHHHHTT--TCSEEEECSSC
T ss_pred             ccccccHHHHHHHHhCCCeeEeeecccchhHHhh-----------cCceEee--------ehhhhhh--hccEEEecCCC
Confidence            6799999999999999999999999875532111           2344332        2556666  78999998886


Q ss_pred             CcccHHHHHHhCC
Q 023110           83 EADEVEPILDALP   95 (287)
Q Consensus        83 ~~~~~~~ll~~~~   95 (287)
                      ...-...-++.++
T Consensus        90 ~~vI~~eh~~~MK  102 (163)
T d1li4a1          90 IDIILGRHFEQMK  102 (163)
T ss_dssp             SCSBCHHHHTTCC
T ss_pred             ccchhHHHHHhcc
Confidence            4444455556665

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.88  E-value=0.72  Score=33.22  Aligned_cols=88  Identities=13%  Similarity=0.038  Sum_probs=47.0

Q ss_pred             ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEE-ecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK-GDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      ++-.|..+++.|++.|++|.++.-.++.............+.. ..++.++. .++.+.+ +.+.++..++|.++.+...
T Consensus         8 ~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~-~~~i~~~~~~~~~~~~-~~~~i~~~~~Dlii~~g~~   85 (203)
T d2blna2           8 YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAA-ERGIPVYAPDNVNHPL-WVERIAQLSPDVIFSFYYR   85 (203)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHH-HHTCCEECCSCCCSHH-HHHHHHHTCCSEEEEESCC
T ss_pred             cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHH-HcCCcceecccccchh-hhhhhhhhcccceeeeecc
Confidence            4557999999999999999887643332111110000011111 23555554 3444444 5566666799998877543


Q ss_pred             CcccHHHHHHhC
Q 023110           83 EADEVEPILDAL   94 (287)
Q Consensus        83 ~~~~~~~ll~~~   94 (287)
                      . --...+++..
T Consensus        86 ~-ii~~~il~~~   96 (203)
T d2blna2          86 H-LIYDEILQLA   96 (203)
T ss_dssp             S-CCCHHHHTTC
T ss_pred             c-chhcccchhh
Confidence            2 2223455543

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=87.59  E-value=0.12  Score=35.49  Aligned_cols=29  Identities=24%  Similarity=0.351  Sum_probs=25.9

Q ss_pred             cccchHHHHHHHHHHcC-CeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g-~~V~~~~r~~~~   31 (287)
                      |+|.+|+++++.|++.| ++|++.+|+++.
T Consensus         7 G~G~MG~ai~~~l~~~~~~~i~v~~r~~~~   36 (152)
T d1yqga2           7 GGGNMAAAVAGGLVKQGGYRIYIANRGAEK   36 (152)
T ss_dssp             CCSHHHHHHHHHHHHHCSCEEEEECSSHHH
T ss_pred             cCcHHHHHHHHHHHHCCCCcEEEEeCChhH
Confidence            56999999999999887 999999999765

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.58  E-value=0.25  Score=32.46  Aligned_cols=29  Identities=21%  Similarity=0.297  Sum_probs=26.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |+|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        30 G~G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          30 GGGIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCCchHHHHHHHHHhhCcceeEEEecccc
Confidence            68999999999999999999999998654

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.55  E-value=0.13  Score=34.88  Aligned_cols=70  Identities=23%  Similarity=0.244  Sum_probs=41.4

Q ss_pred             CcccchHHHHHHHHHHcC--CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            2 GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      |+ |.+|++++..|+.++  .++..++.++........++  ..-...........+|   .    +.++  ++|+|+-+
T Consensus         7 Ga-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl--~~~~~~~~~~~~~~~~---~----~~~~--~adivvit   74 (140)
T d1a5za1           7 GL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDL--IHGTPFTRRANIYAGD---Y----ADLK--GSDVVIVA   74 (140)
T ss_dssp             CC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHH--HHHGGGSCCCEEEECC---G----GGGT--TCSEEEEC
T ss_pred             Cc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccc--cccccccccccccCCc---H----HHhc--CCCEEEEe
Confidence            65 999999999888876  58999998765421110000  0000012233333332   2    2345  89999999


Q ss_pred             CCCC
Q 023110           80 NGRE   83 (287)
Q Consensus        80 a~~~   83 (287)
                      ++..
T Consensus        75 ag~~   78 (140)
T d1a5za1          75 AGVP   78 (140)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            8874

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=87.41  E-value=1.7  Score=30.09  Aligned_cols=89  Identities=12%  Similarity=0.004  Sum_probs=53.3

Q ss_pred             ccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeE-EEEecCCC--hHHHHhhhhcCCccEEEec
Q 023110            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKD--YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~D~~d--~~~~~~~~~~~~~d~vi~~   79 (287)
                      .|.+|...++.+...|. +|++++++..+... .+          .-+.+ .+...-.|  .+.........++|+||.+
T Consensus        36 aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~-a~----------~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~  104 (174)
T d1p0fa2          36 LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPK-AI----------ELGATECLNPKDYDKPIYEVICEKTNGGVDYAVEC  104 (174)
T ss_dssp             CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HH----------HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred             CCchhHHHHHHHHHcCCceeeccCChHHHHHH-HH----------HcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEc
Confidence            58999999999999985 78888888776321 11          12332 33222122  2333344444589999999


Q ss_pred             CCCCcccHHHHHHhCC-CCccEEEEe
Q 023110           80 NGREADEVEPILDALP-NLEQFIYCS  104 (287)
Q Consensus        80 a~~~~~~~~~ll~~~~-~~~~~i~~S  104 (287)
                      .+. .....+.+..+. +..+++.+.
T Consensus       105 ~g~-~~~~~~~~~~~~~~~G~~v~vG  129 (174)
T d1p0fa2         105 AGR-IETMMNALQSTYCGSGVTVVLG  129 (174)
T ss_dssp             SCC-HHHHHHHHHTBCTTTCEEEECC
T ss_pred             CCC-chHHHHHHHHHHHhcCceEEEE
Confidence            874 333445555555 445676555

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=87.17  E-value=0.27  Score=34.42  Aligned_cols=91  Identities=15%  Similarity=0.137  Sum_probs=50.9

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |+|.+|...++.+...|. .|++.++++.+. +..++         ....+.+..+-.+.+...+.....++|+||.+++
T Consensus        40 GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~-~~~~~---------~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g  109 (172)
T d1h2ba2          40 GVGGLGHIAVQLLKVMTPATVIALDVKEEKL-KLAER---------LGADHVVDARRDPVKQVMELTRGRGVNVAMDFVG  109 (172)
T ss_dssp             CCSHHHHHHHHHHHHHCCCEEEEEESSHHHH-HHHHH---------TTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred             CCChHHHHHHHHHHhhcCcccccccchhHHH-HHHhh---------cccceeecCcccHHHHHHHhhCCCCceEEEEecC
Confidence            469999999999988875 666677776542 11110         1222333322122333334333447999999987


Q ss_pred             CCcccHHHHHHhCCCCccEEEEe
Q 023110           82 READEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        82 ~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      .. ......++.++...+++.++
T Consensus       110 ~~-~~~~~a~~~l~~~G~iv~~G  131 (172)
T d1h2ba2         110 SQ-ATVDYTPYLLGRMGRLIIVG  131 (172)
T ss_dssp             CH-HHHHHGGGGEEEEEEEEECC
T ss_pred             cc-hHHHHHHHHHhCCCEEEEEe
Confidence            42 22344455555445776554

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=87.14  E-value=0.16  Score=34.61  Aligned_cols=72  Identities=18%  Similarity=0.180  Sum_probs=42.2

Q ss_pred             CCcccchHHHHHHHHHHcCC--eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      +|+ |.+|++++-.|..+|.  ++..+++++........++  .....+.....+...+  +.+    .++  ++|+||.
T Consensus         7 IGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl--~~a~~~~~~~~i~~~~--~~~----~~~--daDvVVi   75 (143)
T d1llda1           7 IGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDM--QHGSSFYPTVSIDGSD--DPE----ICR--DADMVVI   75 (143)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHH--HHTGGGSTTCEEEEES--CGG----GGT--TCSEEEE
T ss_pred             ECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHH--HhccccCCCceeecCC--CHH----Hhh--CCcEEEE
Confidence            365 9999999999999874  8999998765421110000  0000112233333221  222    244  8999999


Q ss_pred             cCCCC
Q 023110           79 INGRE   83 (287)
Q Consensus        79 ~a~~~   83 (287)
                      ++|..
T Consensus        76 taG~~   80 (143)
T d1llda1          76 TAGPR   80 (143)
T ss_dssp             CCCCC
T ss_pred             ecccc
Confidence            99874

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.08  E-value=0.29  Score=32.15  Aligned_cols=26  Identities=23%  Similarity=0.443  Sum_probs=24.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRG   28 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~   28 (287)
                      |.|++|-.++..|.+.|.+|+++.|+
T Consensus        27 GgG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          27 GASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCccHHHHHHHHhhcCCeEEEEEec
Confidence            68999999999999999999999875

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=86.99  E-value=0.17  Score=34.88  Aligned_cols=28  Identities=14%  Similarity=0.186  Sum_probs=22.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|.+|..+++.|++.|+.| ...|+.++
T Consensus         7 GlG~MG~~ma~~L~~~g~~~-~~~~~~~~   34 (156)
T d2cvza2           7 GLGAMGYPMAGHLARRFPTL-VWNRTFEK   34 (156)
T ss_dssp             CCSTTHHHHHHHHHTTSCEE-EECSSTHH
T ss_pred             eHHHHHHHHHHHHHhCCCEE-EEeCCHHH
Confidence            57999999999999988865 46676654

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=86.88  E-value=0.66  Score=32.66  Aligned_cols=26  Identities=15%  Similarity=0.250  Sum_probs=21.5

Q ss_pred             cccchHHHHHHHHHHc-CCeEEEEEcC
Q 023110            3 GTRFIGVFLSRLLVKE-GHQVTLFTRG   28 (287)
Q Consensus         3 atG~iG~~l~~~l~~~-g~~V~~~~r~   28 (287)
                      |.|.||+.++|.+.++ +.+|+++...
T Consensus         8 GfGRIGR~v~Ral~~~~dievVaInd~   34 (178)
T d1b7go1           8 GYGTIGKRVADAIIKQPDMKLVGVAKT   34 (178)
T ss_dssp             CCSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred             CCCHHHHHHHHHHHhCCCCEEEEEECC
Confidence            4799999999999987 5788887644

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=86.87  E-value=0.15  Score=35.87  Aligned_cols=29  Identities=17%  Similarity=-0.004  Sum_probs=25.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |+|-.+++++-.|.+.|.+|+++.|+.++
T Consensus        25 GaGGaarai~~al~~~g~~i~I~nRt~~k   53 (170)
T d1nyta1          25 GAGGASRGVLLPLLSLDCAVTITNRTVSR   53 (170)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CCcHHHHHHHHHhcccceEEEeccchHHH
Confidence            56888999999999999999999998766

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=86.85  E-value=0.35  Score=33.13  Aligned_cols=56  Identities=20%  Similarity=0.166  Sum_probs=39.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEec
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~   79 (287)
                      +.||+|-.++..|.++|.+|+.+.+...-.. .                    .|-.....+.+.+++.++++..+.
T Consensus        48 ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~~-~--------------------~~~~~~~~~~~~l~~~GV~i~~~~  103 (156)
T d1djqa2          48 DTYFMAPSLAEKLATAGHEVTIVSGVHLANY-M--------------------HFTLEYPNMMRRLHELHVEELGDH  103 (156)
T ss_dssp             CCSSHHHHHHHHHHHTTCEEEEEESSCTTTH-H--------------------HHTTCHHHHHHHHHHTTCEEEETE
T ss_pred             CCChHHHHHHHHHHHcCCeEEEEecCCcccc-c--------------------cchhHHHHHHHHHhhccceEEecc
Confidence            6799999999999999999999999754311 1                    133445556666666666666553

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=86.77  E-value=0.44  Score=31.22  Aligned_cols=29  Identities=28%  Similarity=0.512  Sum_probs=26.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|++|-.++..|.+.|.+|+.+.+.+.-
T Consensus        37 GgG~iG~E~A~~l~~~g~~Vtlie~~~~~   65 (123)
T d1nhpa2          37 GSGYIGIEAAEAFAKAGKKVTVIDILDRP   65 (123)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CChHHHHHHHHHhhccceEEEEEEecCcc
Confidence            68999999999999999999999998654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=86.64  E-value=0.36  Score=31.48  Aligned_cols=29  Identities=24%  Similarity=0.339  Sum_probs=26.5

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |+|+||-.++..|.+.|.+|+.+.|...-
T Consensus        29 G~G~ig~E~A~~l~~~G~~Vtiv~~~~~l   57 (119)
T d3lada2          29 GAGVIGLELGSVWARLGAEVTVLEAMDKF   57 (119)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCChHHHHHHHHHHHcCCceEEEEeeccc
Confidence            68999999999999999999999988654

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.61  E-value=0.17  Score=34.40  Aligned_cols=29  Identities=10%  Similarity=0.062  Sum_probs=24.3

Q ss_pred             CcccchHHHHHHHHHHcC--CeEEEEEcCCcc
Q 023110            2 GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g--~~V~~~~r~~~~   31 (287)
                      |+ |.+|++++-.|..+|  .++..++.+++.
T Consensus         7 Ga-G~VG~~~a~~l~~~~~~~elvL~Di~~~~   37 (142)
T d1ojua1           7 GA-GRVGSTSAFTCLLNLDVDEIALVDIAEDL   37 (142)
T ss_dssp             CC-SHHHHHHHHHHHHHSCCSEEEEECSSHHH
T ss_pred             Cc-CHHHHHHHHHHHhcCcCceEEEEecccch
Confidence            64 999999999999887  479999887654

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.47  E-value=0.28  Score=37.70  Aligned_cols=28  Identities=14%  Similarity=0.216  Sum_probs=25.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~   30 (287)
                      +||..|.+|++.|+.+|++|+.+++..+
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~~s   71 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRARS   71 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecCCc
Confidence            6899999999999999999999987643

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=86.29  E-value=0.29  Score=32.07  Aligned_cols=28  Identities=39%  Similarity=0.600  Sum_probs=25.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~   30 (287)
                      |.|++|-.++..|.+.|.+|+.+.|++.
T Consensus        39 GgG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          39 GGGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             ECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcHHHHHHHHHhhcccceEEEEecccc
Confidence            6899999999999999999999998754

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=86.25  E-value=0.33  Score=31.47  Aligned_cols=29  Identities=34%  Similarity=0.516  Sum_probs=26.5

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |+|++|-.++..|.+.|.+|+.+.|.+.-
T Consensus        28 GgG~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          28 GAGYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCChhhHHHHHHhhccccEEEEEeecchh
Confidence            68999999999999999999999998654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=86.12  E-value=0.3  Score=31.65  Aligned_cols=29  Identities=28%  Similarity=0.334  Sum_probs=26.3

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|++|-.++..|.+.|.+|+.+.|.+.-
T Consensus        28 GgG~~G~E~A~~l~~~g~~Vtlve~~~~i   56 (115)
T d1lvla2          28 GGGYIGLELGIAYRKLGAQVSVVEARERI   56 (115)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCCHHHHHHHHHHhhcccceEEEeeeccc
Confidence            68999999999999999999999988644

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=85.80  E-value=0.31  Score=31.70  Aligned_cols=29  Identities=28%  Similarity=0.497  Sum_probs=26.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|++|-.++..|.+.|.+|+.+.|...-
T Consensus        29 GgG~iG~E~A~~l~~~g~~Vtlv~~~~~i   57 (117)
T d1onfa2          29 GSGYIAVELINVIKRLGIDSYIFARGNRI   57 (117)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred             CCchHHHHHHHHHHhccccceeeehhccc
Confidence            68999999999999999999999998643

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=85.00  E-value=0.83  Score=31.72  Aligned_cols=76  Identities=13%  Similarity=0.189  Sum_probs=44.3

Q ss_pred             cccchHHHHHHHHHHc-CCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCC
Q 023110            3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |+|.+|+.+++.+.+. +.+++++........               .......     ..+......  ++|+|+.+..
T Consensus        10 G~G~ig~~~~~~l~~~~~~elvav~~~~~~~~---------------~~~~~~~-----~~~~~~~~~--~~D~Vvi~tp   67 (170)
T d1f06a1          10 GYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD---------------TKTPVFD-----VADVDKHAD--DVDVLFLCMG   67 (170)
T ss_dssp             CCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS---------------SSSCEEE-----GGGGGGTTT--TCSEEEECSC
T ss_pred             CChHHHHHHHHHHHhCCCcEEEEEEecccccc---------------ccccccc-----chhhhhhcc--ccceEEEeCC
Confidence            5799999999999876 678887664433211               1111111     112233344  8999998876


Q ss_pred             CCcccHHHHHHhCCCCccEE
Q 023110           82 READEVEPILDALPNLEQFI  101 (287)
Q Consensus        82 ~~~~~~~~ll~~~~~~~~~i  101 (287)
                      ... ....+..+++..+++|
T Consensus        68 ~~~-h~~~a~~aL~aG~~vv   86 (170)
T d1f06a1          68 SAT-DIPEQAPKFAQFACTV   86 (170)
T ss_dssp             TTT-HHHHHHHHHTTTSEEE
T ss_pred             Ccc-cHHHHHHHHHCCCcEE
Confidence            543 3444555555445655

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=84.89  E-value=0.36  Score=31.67  Aligned_cols=29  Identities=21%  Similarity=0.360  Sum_probs=26.9

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|++|-.++..|.+.|.+|+++.|++.-
T Consensus        32 G~G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          32 GAGYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             ccchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            68999999999999999999999998765

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=84.65  E-value=0.2  Score=35.28  Aligned_cols=29  Identities=14%  Similarity=0.022  Sum_probs=25.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |+|-.+++++..|.+.+.+|+++.|+.++
T Consensus        25 GaGGaarai~~aL~~~~~~i~I~nR~~~~   53 (171)
T d1p77a1          25 GAGGATKGVLLPLLQAQQNIVLANRTFSK   53 (171)
T ss_dssp             CCSHHHHTTHHHHHHTTCEEEEEESSHHH
T ss_pred             CCcHHHHHHHHHHcccCceeeeccchHHH
Confidence            67888999999999888899999999766

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.63  E-value=0.43  Score=31.36  Aligned_cols=29  Identities=24%  Similarity=0.424  Sum_probs=26.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |.|++|-.++..|.+.|.+|+.+.|+..-
T Consensus        29 GgG~iG~E~A~~l~~~G~~Vtlv~~~~~~   57 (125)
T d3grsa2          29 GAGYIAVEMAGILSALGSKTSLMIRHDKV   57 (125)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             cCCccHHHHHHHHhcCCcEEEEEeecccc
Confidence            67999999999999999999999998644

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=84.51  E-value=0.81  Score=31.47  Aligned_cols=88  Identities=11%  Similarity=0.089  Sum_probs=52.2

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCC-C-hHHHHhhhhcCCccEEEecC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-D-YDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~-d-~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |+|-+|...++.+...|.+|+++++++++.. ..+          .-+++.+...-. | .+.+...-.  +.+.+|.++
T Consensus        35 G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~-~~k----------~~Ga~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~  101 (168)
T d1rjwa2          35 GIGGLGHVAVQYAKAMGLNVVAVDIGDEKLE-LAK----------ELGADLVVNPLKEDAAKFMKEKVG--GVHAAVVTA  101 (168)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHH-HHH----------HTTCSEEECTTTSCHHHHHHHHHS--SEEEEEESS
T ss_pred             ecccchhhhhHHHhcCCCeEeccCCCHHHhh-hhh----------hcCcceecccccchhhhhcccccC--CCceEEeec
Confidence            4689999999999999999999998876631 111          123433332221 2 222333333  667777666


Q ss_pred             CCCcccHHHHHHhCCCCccEEEEe
Q 023110           81 GREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        81 ~~~~~~~~~ll~~~~~~~~~i~~S  104 (287)
                      +. .......+++++...+++.++
T Consensus       102 ~~-~~~~~~a~~~l~~~G~i~~~g  124 (168)
T d1rjwa2         102 VS-KPAFQSAYNSIRRGGACVLVG  124 (168)
T ss_dssp             CC-HHHHHHHHHHEEEEEEEEECC
T ss_pred             CC-HHHHHHHHHHhccCCceEecc
Confidence            42 445666777776444565543

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=84.13  E-value=0.32  Score=32.18  Aligned_cols=83  Identities=10%  Similarity=0.070  Sum_probs=50.5

Q ss_pred             cccchHHHHHHHHHH-cCCeEEEEEcCCcccc-ccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecC
Q 023110            3 GTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~l~~-~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |+|.+|++|++++.. .+|+++++.-+.+... ..            ..++.++.     .+.+.+..+ ...+.++-+.
T Consensus        10 GaG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~------------I~Gi~V~~-----~~~l~~~~~-~~i~iai~~i   71 (126)
T d2dt5a2          10 GMGRLGSALADYPGFGESFELRGFFDVDPEKVGRP------------VRGGVIEH-----VDLLPQRVP-GRIEIALLTV   71 (126)
T ss_dssp             CCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCE------------ETTEEEEE-----GGGHHHHST-TTCCEEEECS
T ss_pred             cCCHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCE------------ECCEEEec-----HHHHHHHHh-hcccEEEEeC
Confidence            689999999998754 4789999776544321 11            13555542     334556555 3566655554


Q ss_pred             CCCcccHHHHHHhCC--CCccEEEEec
Q 023110           81 GREADEVEPILDALP--NLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~~~~~ll~~~~--~~~~~i~~Ss  105 (287)
                      .  ....+.+++.|.  +++.+.-++.
T Consensus        72 ~--~~~~~~I~d~l~~~gIk~I~~f~~   96 (126)
T d2dt5a2          72 P--REAAQKAADLLVAAGIKGILNFAP   96 (126)
T ss_dssp             C--HHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             C--HHHHHHHHHHHHHcCCCEEeecCc
Confidence            3  455566766655  7776665544

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=83.84  E-value=0.48  Score=31.53  Aligned_cols=29  Identities=24%  Similarity=0.391  Sum_probs=26.8

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |+|++|-.++..|.+.|.+|+.+.+.+..
T Consensus        42 GgG~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          42 GGGYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             CCchHHHHHHHHHHhhCcceeeeeecccc
Confidence            68999999999999999999999998764

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=83.76  E-value=0.58  Score=33.69  Aligned_cols=63  Identities=17%  Similarity=0.143  Sum_probs=41.0

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |-|.+|+++++.|.+.|.+|++.+.+........           ..+.+.+     +.+   +++. ..+|+++-||..
T Consensus        34 G~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~-----------~~g~~~~-----~~~---~~~~-~~~DI~iPcA~~   93 (201)
T d1c1da1          34 GLGAVGGSLASLAAEAGAQLLVADTDTERVAHAV-----------ALGHTAV-----ALE---DVLS-TPCDVFAPCAMG   93 (201)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTCEEC-----CGG---GGGG-CCCSEEEECSCS
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH-----------hhccccc-----Ccc---cccc-ccceeeeccccc
Confidence            5789999999999999999998876654421110           1222222     222   3343 489999999866


Q ss_pred             Ccc
Q 023110           83 EAD   85 (287)
Q Consensus        83 ~~~   85 (287)
                      +..
T Consensus        94 ~~I   96 (201)
T d1c1da1          94 GVI   96 (201)
T ss_dssp             CCB
T ss_pred             ccc
Confidence            544

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=83.73  E-value=0.84  Score=32.13  Aligned_cols=90  Identities=13%  Similarity=-0.010  Sum_probs=58.6

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEe--------------------cC--CC
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG--------------------DR--KD   60 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--------------------D~--~d   60 (287)
                      |.|-.|..-++.+...|.+|.+++.+..... .+++          ....++..                    +.  ..
T Consensus        36 GaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~-~l~~----------l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~  104 (183)
T d1l7da1          36 GVGVAGLQAIATAKRLGAVVMATDVRAATKE-QVES----------LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ  104 (183)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCSTTHH-HHHH----------TTCEECCC-----------------------CCH
T ss_pred             cCcHHHHHHHHHHHHcCCEEEEEeccHHHHH-HHHH----------hhcceEEEeccccccccccccchhhcCHHHHHHH
Confidence            5688999999999999999999999887632 1111          01111111                    11  12


Q ss_pred             hHHHHhhhhcCCccEEEecCCCC-----cccHHHHHHhCCCCccEEEEec
Q 023110           61 YDFVKSSLSAKGFDVVYDINGRE-----ADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        61 ~~~~~~~~~~~~~d~vi~~a~~~-----~~~~~~ll~~~~~~~~~i~~Ss  105 (287)
                      .+.+.+.++  ++|+||-.+-..     ..-++.+++.|+...-+|=++.
T Consensus       105 ~~~l~~~l~--~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvai  152 (183)
T d1l7da1         105 AEAVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV  152 (183)
T ss_dssp             HHHHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred             HHHHHHHHH--hhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEee
Confidence            456677777  899999887553     3347889999985445554443

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=83.69  E-value=0.6  Score=32.00  Aligned_cols=29  Identities=24%  Similarity=0.251  Sum_probs=23.5

Q ss_pred             CcccchHHHHHHHHHHcCC-eEEEEEcCCcc
Q 023110            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAP   31 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~-~V~~~~r~~~~   31 (287)
                      |+ |.+|+.++..|...+. +++.++.++..
T Consensus        14 Ga-G~VG~~lA~~l~~~~~~el~L~D~~~~~   43 (154)
T d1pzga1          14 GS-GMIGGTMGYLCALRELADVVLYDVVKGM   43 (154)
T ss_dssp             CC-SHHHHHHHHHHHHHTCCEEEEECSSSSH
T ss_pred             CC-CHHHHHHHHHHHhCCCceEEEEEecccc
Confidence            65 9999999988888774 88888877654

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=83.61  E-value=0.85  Score=31.04  Aligned_cols=30  Identities=27%  Similarity=0.302  Sum_probs=25.1

Q ss_pred             CCcccchHHHHHHHHHHc--CCeEEEEEcCCc
Q 023110            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKA   30 (287)
Q Consensus         1 tGatG~iG~~l~~~l~~~--g~~V~~~~r~~~   30 (287)
                      +|+||.||+...+-+.+.  .++|.+++-..+
T Consensus         8 lGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N   39 (150)
T d1r0ka2           8 LGATGSIGHSTLDLIERNLDRYQVIALTANRN   39 (150)
T ss_dssp             ETTTSHHHHHHHHHHHHTGGGEEEEEEEESSC
T ss_pred             ECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCC
Confidence            599999999999999875  588888876643

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=83.45  E-value=0.17  Score=35.37  Aligned_cols=29  Identities=10%  Similarity=0.263  Sum_probs=25.3

Q ss_pred             cccchHHHHHHHHHHcCC-eEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~-~V~~~~r~~~~   31 (287)
                      |+|..|++++..|.+.|. +|.++.|+.++
T Consensus        24 GaGGaarai~~aL~~~g~~~I~I~nR~~~k   53 (167)
T d1npya1          24 GSGGMAKAVVAAFKNSGFEKLKIYARNVKT   53 (167)
T ss_dssp             CSSTTHHHHHHHHHHTTCCCEEEECSCHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEecccHHH
Confidence            568899999999999996 78999898765

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=83.10  E-value=1  Score=32.09  Aligned_cols=67  Identities=15%  Similarity=0.038  Sum_probs=42.0

Q ss_pred             ccchHHHHHHHHHHcCC-eEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCCh---HHHHhhhhcCCccEEEec
Q 023110            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~~~~~~~~~~~d~vi~~   79 (287)
                      +|.+|...+..+...|. +|+++++++.+.. ..+          .-+.+.+. |..+.   +.+.++....++|++|.+
T Consensus        34 aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~-~a~----------~~Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vid~  101 (195)
T d1kola2          34 AGPVGLAAAASARLLGAAVVIVGDLNPARLA-HAK----------AQGFEIAD-LSLDTPLHEQIAALLGEPEVDCAVDA  101 (195)
T ss_dssp             CSHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HHH----------HTTCEEEE-TTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred             cCHHHHHHHHHHHhhcccceeeecccchhhH-hhh----------hccccEEE-eCCCcCHHHHHHHHhCCCCcEEEEEC
Confidence            58999888888877775 7888888766531 111          12444433 33332   334444445589999999


Q ss_pred             CCC
Q 023110           80 NGR   82 (287)
Q Consensus        80 a~~   82 (287)
                      .|.
T Consensus       102 vG~  104 (195)
T d1kola2         102 VGF  104 (195)
T ss_dssp             CCT
T ss_pred             ccc
Confidence            874

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=82.76  E-value=0.51  Score=31.07  Aligned_cols=29  Identities=14%  Similarity=0.233  Sum_probs=26.4

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCcc
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~   31 (287)
                      |+|++|-.++..|.+.|.+|+.+.+.+.-
T Consensus        33 GgG~IG~E~A~~~~~~G~~Vtive~~~~i   61 (125)
T d1ojta2          33 GGGIIGLEMGTVYSTLGSRLDVVEMMDGL   61 (125)
T ss_dssp             SCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCCHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence            68999999999999999999999998644

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=82.10  E-value=0.57  Score=31.96  Aligned_cols=29  Identities=31%  Similarity=0.481  Sum_probs=22.9

Q ss_pred             CcccchHHHHHHHHHHcC-CeEEEEEcCCcc
Q 023110            2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g-~~V~~~~r~~~~   31 (287)
                      | +|.+|++++..|...+ .++..++++...
T Consensus        10 G-aG~VG~~~a~~l~~~~l~el~L~Di~~~~   39 (150)
T d1t2da1          10 G-SGMIGGVMATLIVQKNLGDVVLFDIVKNM   39 (150)
T ss_dssp             C-CSHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             C-CCHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence            6 5999999998777765 478888887755

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=81.45  E-value=0.71  Score=30.53  Aligned_cols=78  Identities=12%  Similarity=0.060  Sum_probs=50.1

Q ss_pred             Ccc---cchHHHHHHHHHHcC-CeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEE
Q 023110            2 GGT---RFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         2 Gat---G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi   77 (287)
                      |||   +..|..+.+.|.+.| ++|+.+..+..+.                .+.. ..-++.|      +-.  .+|.++
T Consensus        15 GaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i----------------~G~~-~y~sl~d------lp~--~vDlvv   69 (129)
T d2csua1          15 GASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV----------------QGVK-AYKSVKD------IPD--EIDLAI   69 (129)
T ss_dssp             TCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE----------------TTEE-CBSSTTS------CSS--CCSEEE
T ss_pred             ccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc----------------CCeE-eecchhh------cCC--CCceEE
Confidence            776   889999999987765 6898887654431                1222 1123333      223  789888


Q ss_pred             ecCCCCcccHHHHHHhCC--CCccEEEEecc
Q 023110           78 DINGREADEVEPILDALP--NLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~ll~~~~--~~~~~i~~Ss~  106 (287)
                      -+..  ...+..+++.+.  +++.++.+|+.
T Consensus        70 i~vp--~~~~~~~~~~~~~~g~~~~vi~s~G   98 (129)
T d2csua1          70 IVVP--KRFVKDTLIQCGEKGVKGVVIITAG   98 (129)
T ss_dssp             ECSC--HHHHHHHHHHHHHHTCCEEEECCCS
T ss_pred             EecC--hHHhHHHHHHHHHcCCCEEEEeccc
Confidence            7753  555666666654  88888877763

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=81.27  E-value=0.78  Score=31.59  Aligned_cols=71  Identities=10%  Similarity=-0.080  Sum_probs=50.0

Q ss_pred             ccchHHHHHHHHHHcCCeEEEEEcCCccccccCCCCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEecCCCC
Q 023110            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (287)
Q Consensus         4 tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~~a~~~   83 (287)
                      =|++|+.+++.|...|.+|+++..+|-...+..           .++++..        .+.++++  ..|++|.+.|..
T Consensus        31 YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~-----------mdGf~v~--------~~~~a~~--~aDi~vTaTGn~   89 (163)
T d1v8ba1          31 YGDVGKGCASSMKGLGARVYITEIDPICAIQAV-----------MEGFNVV--------TLDEIVD--KGDFFITCTGNV   89 (163)
T ss_dssp             CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-----------TTTCEEC--------CHHHHTT--TCSEEEECCSSS
T ss_pred             ccccchhHHHHHHhCCCEEEEEecCchhhHHHH-----------hcCCccC--------chhHccc--cCcEEEEcCCCC
Confidence            489999999999999999999999885532221           2455432        3457777  889999988764


Q ss_pred             cccHHHHHHhCC
Q 023110           84 ADEVEPILDALP   95 (287)
Q Consensus        84 ~~~~~~ll~~~~   95 (287)
                      ..-...-++.++
T Consensus        90 ~vI~~~h~~~MK  101 (163)
T d1v8ba1          90 DVIKLEHLLKMK  101 (163)
T ss_dssp             SSBCHHHHTTCC
T ss_pred             ccccHHHHHHhh
Confidence            444444555555

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=81.14  E-value=0.24  Score=35.44  Aligned_cols=80  Identities=13%  Similarity=0.131  Sum_probs=48.7

Q ss_pred             cccchHHHHHHHHHHcCCeEEEEEcCCccccccCC----CCChhhhhhhcCCeEEEEecCCChHHHHhhhhcCCccEEEe
Q 023110            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP----GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~~~d~vi~   78 (287)
                      |+|..|++++..|.+.|++|+..+|++........    ....+. ..++.++.       -..++.++++  ++|+||.
T Consensus        14 GaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~-~~l~~~i~-------~t~~l~~a~~--~ad~iii   83 (189)
T d1n1ea2          14 GSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKG-VQLASNIT-------FTSDVEKAYN--GAEIILF   83 (189)
T ss_dssp             CCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTT-CBCCTTEE-------EESCHHHHHT--TCSCEEE
T ss_pred             CCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccc-cccccccc-------cchhhhhccC--CCCEEEE
Confidence            68999999999999999999999998654211000    000000 00122332       1234677787  8999988


Q ss_pred             cCCCCcccHHHHHHhC
Q 023110           79 INGREADEVEPILDAL   94 (287)
Q Consensus        79 ~a~~~~~~~~~ll~~~   94 (287)
                      +.  +....+.+++.+
T Consensus        84 av--Ps~~~~~~~~~~   97 (189)
T d1n1ea2          84 VI--PTQFLRGFFEKS   97 (189)
T ss_dssp             CS--CHHHHHHHHHHH
T ss_pred             cC--cHHHHHHHHHHH
Confidence            65  355555566554

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.88  E-value=0.21  Score=34.65  Aligned_cols=29  Identities=14%  Similarity=0.237  Sum_probs=24.3

Q ss_pred             CcccchHHHHHHHHHHcCC--eEEEEEcCCcc
Q 023110            2 GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAP   31 (287)
Q Consensus         2 GatG~iG~~l~~~l~~~g~--~V~~~~r~~~~   31 (287)
                      | +|.+|.+++..|..+|.  ++..++++...
T Consensus        26 G-aG~VG~~~A~~l~~~~l~~elvL~D~~~~~   56 (159)
T d2ldxa1          26 G-VGDVGMACAISILLKGLADELALVDADTDK   56 (159)
T ss_dssp             C-CSHHHHHHHHHHHTTTSCSEEEEECSCHHH
T ss_pred             C-CCHHHHHHHHHHHhcCCCCEEEEEeCCchh
Confidence            6 49999999999999874  89999887644