BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023111
(287 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94G16|TATB_PEA Sec-independent protein translocase protein TATB, chloroplastic
OS=Pisum sativum GN=TATB PE=1 SV=1
Length = 261
Score = 264 bits (675), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 153/267 (57%), Positives = 181/267 (67%), Gaps = 18/267 (6%)
Query: 25 MTIVTVMASSTHALLLCSSSPSYTSSRPSVYSLSSSATPISCPKTTNFHLSTTIPQLGSS 84
MT +ASST +LLC P + S+ S+ TP S K +FHL + LG
Sbjct: 1 MTPSLAIASSTSTMLLC---PKLGTCSMSL----STCTPTSHSKIHHFHLYS----LGKR 49
Query: 85 LFSQWSGLKHLGISVTPKS--VNLLEKKRRCKRGVFYASLFGVGAPEALVIGVVALLVFG 142
LF+ W+G K LG S PK + + KK RCK V YASLFGVGAPEALVIGVVALLVFG
Sbjct: 50 LFTPWNGFKQLGFSTKPKKPLFHFIGKKGRCKGKVVYASLFGVGAPEALVIGVVALLVFG 109
Query: 143 PKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDDISTSTQNPNNLNRTDT 202
PKGLAEVARNLGKTLR FQPTIRE+QDVSREFKSTLEREIG+DDI+ Q+ + N +T
Sbjct: 110 PKGLAEVARNLGKTLREFQPTIREIQDVSREFKSTLEREIGIDDITNPLQSTYSSNVRNT 169
Query: 203 MSTPPSVTSTEDSQTVADPNGAASANKAYTSEEYLKMTEEQLKASAAHQQEQ--SPQGES 260
TP + T +SQT DPNG +KAY+SEEYLK+TEEQLKA AA QQEQ SP+ +
Sbjct: 170 TPTPSATEITNNSQTAVDPNGKVDESKAYSSEEYLKITEEQLKAVAAQQQEQTSSPKEDE 229
Query: 261 LSEPQTQPQDTAKETPSAVPPPPKPKN 287
+ E Q QP A ET + VPPP KP++
Sbjct: 230 I-EQQIQP--PANETAATVPPPQKPES 253
>sp|Q9XH75|TATB_ARATH Sec-independent protein translocase protein TATB, chloroplastic
OS=Arabidopsis thaliana GN=TATB PE=1 SV=1
Length = 260
Score = 232 bits (592), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/264 (57%), Positives = 174/264 (65%), Gaps = 20/264 (7%)
Query: 31 MASSTHALLLCSSSPSYTSSRPSVYSLSSSATPISCPKTTNFHLSTTIPQLGSSLFSQWS 90
MA + + SSSP+ T S Y S S P +LS+ LGSS FS +
Sbjct: 1 MAMALQIIASSSSSPTITKSHLFSYPPLQSRYKASKP-----NLSSWFSLLGSSRFSPYI 55
Query: 91 GLKHLGISVTPKSVNLLEKKRRCKRGVFYASLFGVGAPEALVIGVVALLVFGPKGLAEVA 150
GLKHLGIS++PKS N EKKRRCK + ASLFGVGAPEALVIGVVALLVFGPKGLAEVA
Sbjct: 56 GLKHLGISISPKSSNP-EKKRRCKSMMIRASLFGVGAPEALVIGVVALLVFGPKGLAEVA 114
Query: 151 RNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDDIST---STQNPNNLNRTDTMSTPP 207
RNLGKTLR FQPTIRELQDVSR+FKSTLEREIGLDDIST QN N + PP
Sbjct: 115 RNLGKTLRTFQPTIRELQDVSRDFKSTLEREIGLDDISTPNVYNQNRTNPVQPPPPPPPP 174
Query: 208 SVTSTEDSQTVADPNGAASANKAYTSEEYLKMTEEQLKA-SAAHQQ-------EQSPQGE 259
SV STE T DPN + S KAYTSE+YLK TEEQLKA S A Q ++ PQ
Sbjct: 175 SVPSTEAPVTANDPNDSQSP-KAYTSEDYLKFTEEQLKALSPAESQTEDQTQTQEPPQPT 233
Query: 260 SLSEP--QTQPQDTAKETPSAVPP 281
++ P ++QP TA+ET +A PP
Sbjct: 234 TVQTPTGESQPNGTARETTAASPP 257
>sp|O48950|TATB_MAIZE Sec-independent protein translocase protein TATB, chloroplastic
OS=Zea mays GN=TATB PE=1 SV=1
Length = 243
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 114/179 (63%), Gaps = 25/179 (13%)
Query: 89 WSGLKHLGISVTPKSVNLLEKKRRCKRGVFYASLFGVGAPEALVIGVVALLVFGPKGLAE 148
W G++ I S + R +R V ASLFGVGAPEALVIGVVALLVFGPKGLAE
Sbjct: 37 WKGVEWGSIQTRMVSSFVAVGSRTRRRNVICASLFGVGAPEALVIGVVALLVFGPKGLAE 96
Query: 149 VARNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDDISTSTQNPNNLNRTDTMSTPPS 208
VARNLGKTLRAFQPTIRELQDVSREF+STLEREIG+D++S ST R TM+
Sbjct: 97 VARNLGKTLRAFQPTIRELQDVSREFRSTLEREIGIDEVSQSTN-----YRPTTMNN--- 148
Query: 209 VTSTEDSQTVADPNGAASANKAYTSEEYLKMTEEQL-----------KASAAHQQEQSP 256
+ Q ADPN YTSEE +K+TEEQ+ + + + QQE++P
Sbjct: 149 -----NQQPAADPN-VKPEPAPYTSEELMKVTEEQIAASAAAAWNPQQPATSQQQEEAP 201
>sp|Q2R237|TATB_ORYSJ Sec-independent protein translocase protein TATB, chloroplastic
OS=Oryza sativa subsp. japonica GN=TATB PE=2 SV=2
Length = 247
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 102/140 (72%), Gaps = 18/140 (12%)
Query: 108 EKKRRCKRGVFYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIREL 167
E KR + YASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIREL
Sbjct: 65 ESKRTSRGTGVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIREL 124
Query: 168 QDVSREFKSTLEREIGLDDISTSTQNPNNLN-RTDTM--STPPSVTSTEDSQTVADPNGA 224
QDVSREF+STLEREIGLD++ P ++N R TM S P++ + D + A P
Sbjct: 125 QDVSREFRSTLEREIGLDEV------PPSMNYRPPTMNNSQQPAIDQSSDDKPEAAP--- 175
Query: 225 ASANKAYTSEEYLKMTEEQL 244
YTSEE +K+TEEQL
Sbjct: 176 ------YTSEELIKVTEEQL 189
>sp|Q5N2J3|TATA_SYNP6 Sec-independent protein translocase protein TatA OS=Synechococcus
sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=tatA
PE=3 SV=1
Length = 91
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 43/62 (69%), Gaps = 7/62 (11%)
Query: 121 SLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
+ FG+G PE LVI +ALLVFGPK L E+ R+LGK LR F QD SREF+S ++R
Sbjct: 2 NFFGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGF-------QDASREFESEIKR 54
Query: 181 EI 182
EI
Sbjct: 55 EI 56
>sp|Q31RR1|TATA_SYNE7 Sec-independent protein translocase protein TatA OS=Synechococcus
elongatus (strain PCC 7942) GN=tatA PE=3 SV=1
Length = 91
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 43/62 (69%), Gaps = 7/62 (11%)
Query: 121 SLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
+ FG+G PE LVI +ALLVFGPK L E+ R+LGK LR F QD SREF+S ++R
Sbjct: 2 NFFGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGF-------QDASREFESEIKR 54
Query: 181 EI 182
EI
Sbjct: 55 EI 56
>sp|Q8DJ44|TATA_THEEB Sec-independent protein translocase protein TatA
OS=Thermosynechococcus elongatus (strain BP-1) GN=tatA
PE=3 SV=1
Length = 77
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%)
Query: 121 SLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
++FG+G PE +VI VVALL+FGPK L E+ R+LGKT RAF+ RE QD + + LE
Sbjct: 2 NVFGIGLPELIVILVVALLIFGPKKLPEIGRSLGKTKRAFEEASREFQDEIKRQTAALEE 61
Query: 181 E 181
E
Sbjct: 62 E 62
>sp|Q9XH46|TATA_PEA Sec-independent protein translocase protein TATA, chloroplastic
OS=Pisum sativum GN=TATA PE=1 SV=1
Length = 137
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 110 KRRCKRGVFYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQD 169
K R +G + FG+G PE +VI VA LVFGPK L EV R++G+T+++F Q
Sbjct: 46 KTRTTKGFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSF-------QQ 98
Query: 170 VSREFKSTLERE 181
++EF++ L++E
Sbjct: 99 AAKEFETELKKE 110
>sp|Q75GK3|TATA_ORYSJ Sec-independent protein translocase protein TATA, chloroplastic
OS=Oryza sativa subsp. japonica GN=TATA PE=2 SV=1
Length = 170
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 7/60 (11%)
Query: 122 LFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLERE 181
LFG+G PE +VI VA LVFGPK L E+ R++GKT+++F Q ++EF++ L++E
Sbjct: 84 LFGLGVPELVVIAGVAALVFGPKQLPEIGRSIGKTVKSF-------QQAAKEFETELKKE 136
>sp|Q9XFJ8|TATA_MAIZE Sec-independent protein translocase protein TATA, chloroplastic
OS=Zea mays GN=TATA PE=1 SV=1
Length = 170
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 7/62 (11%)
Query: 122 LFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLERE 181
LFG+G PE VI VA LVFGPK L E+ R++GKT+++F Q ++EF++ L++E
Sbjct: 85 LFGLGVPELAVIAGVAALVFGPKQLPEIGRSIGKTVKSF-------QQAAKEFETELKKE 137
Query: 182 IG 183
G
Sbjct: 138 PG 139
>sp|A8G311|TATA_PROM2 Sec-independent protein translocase protein TatA OS=Prochlorococcus
marinus (strain MIT 9215) GN=tatA PE=3 SV=1
Length = 86
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 121 SLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
++FGVG PE VI ++ALL+FGPK L E+ + LGKTL++ L+ S EF++ +++
Sbjct: 2 NIFGVGLPEVTVILILALLIFGPKKLPELGKQLGKTLKS-------LKKASNEFQNEIDQ 54
Query: 181 EIGLDDISTSTQNPNNLNRTD 201
+ +D S + N N +
Sbjct: 55 VMNEEDESPKSIESNQTNEIN 75
>sp|A2BPF4|TATA_PROMS Sec-independent protein translocase protein TatA OS=Prochlorococcus
marinus (strain AS9601) GN=tatA PE=3 SV=1
Length = 88
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 12/84 (14%)
Query: 121 SLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
++FGVG PE VI ++ALL+FGPK L E+ + LGKTL++ L+ S EF++ +++
Sbjct: 2 NIFGVGLPEVTVILILALLIFGPKKLPELGKQLGKTLKS-------LKKASNEFQNEIDQ 54
Query: 181 EIGLDD-----ISTSTQNPNNLNR 199
+ D IS + N +N+
Sbjct: 55 VMNEQDKDESPISIESNQTNEINQ 78
>sp|A3PB74|TATA_PROM0 Sec-independent protein translocase protein TatA OS=Prochlorococcus
marinus (strain MIT 9301) GN=tatA PE=3 SV=1
Length = 88
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 121 SLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQD 169
++FGVG PE VI ++ALL+FGPK L E+ + LGKTL++ + E Q+
Sbjct: 2 NIFGVGLPEVTVILILALLIFGPKKLPELGKQLGKTLKSLKKASNEFQN 50
>sp|Q110N2|TATA_TRIEI Sec-independent protein translocase protein TatA OS=Trichodesmium
erythraeum (strain IMS101) GN=tatA PE=3 SV=1
Length = 87
Score = 56.6 bits (135), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 121 SLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
++FG+G PE +VI VVALL+FGPK L E+ R+LG+ + +F+ R+ ++ + LE
Sbjct: 2 NIFGIGLPEMIVILVVALLIFGPKKLPEIGRSLGQAINSFKAGARDFENEFKREAKHLEE 61
Query: 181 EIGLDDISTSTQNPNNL 197
+ +STS P +
Sbjct: 62 GV---KVSTSASEPEKV 75
>sp|Q7NMQ4|TATA_GLOVI Sec-independent protein translocase protein TatA OS=Gloeobacter
violaceus (strain PCC 7421) GN=tatA PE=3 SV=1
Length = 72
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 123 FGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQ 161
FG+G PE LVIGV+ALL+FGPK L E+ LGK +R F+
Sbjct: 3 FGLGLPEILVIGVIALLIFGPKKLPEMGSALGKAIRGFK 41
>sp|Q9LKU2|TATA_ARATH Sec-independent protein translocase protein TATA, chloroplastic
OS=Arabidopsis thaliana GN=TATA PE=1 SV=1
Length = 147
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 7/61 (11%)
Query: 121 SLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
+LFG+G PE VI VA L+FGPK L E+ +++GKT+++F Q ++EF+S L+
Sbjct: 62 ALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSF-------QQAAKEFESELKT 114
Query: 181 E 181
E
Sbjct: 115 E 115
>sp|Q2KTS6|TATB_BORA1 Sec-independent protein translocase protein TatB OS=Bordetella
avium (strain 197N) GN=tatB PE=3 SV=1
Length = 165
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 7/66 (10%)
Query: 122 LFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLERE 181
+F V E +VIGVVAL+V GP+ L +VAR +G L Q R + DV KS ++RE
Sbjct: 1 MFDVSFTELIVIGVVALIVLGPERLPKVARTVGHLLGRAQ---RYVHDV----KSDIQRE 53
Query: 182 IGLDDI 187
I LD++
Sbjct: 54 IELDEL 59
>sp|Q7VSY1|TATB_BORPE Sec-independent protein translocase protein TatB OS=Bordetella
pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
GN=tatB PE=3 SV=1
Length = 147
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
Query: 122 LFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLERE 181
+F V E +VIGV+AL+V GP+ L +VAR +G L Q R + DV KS + RE
Sbjct: 1 MFDVSFTELMVIGVIALVVIGPERLPKVARTIGHLLGRAQ---RYVNDV----KSDIRRE 53
Query: 182 IGLDDISTSTQNPNNLNRTDTMSTPPSVTSTEDS 215
I LD++ + N ++ T S S+ TED+
Sbjct: 54 IELDELR---KFKNEMDET-ARSMQTSLRETEDT 83
>sp|B7GI41|TATA_ANOFW Sec-independent protein translocase protein TatA OS=Anoxybacillus
flavithermus (strain DSM 21510 / WK1) GN=tatA PE=3 SV=1
Length = 60
Score = 48.9 bits (115), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 122 LFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQD 169
L +G P ++I V+AL++FGPK L E+ R G+TLR F+ + + L+D
Sbjct: 2 LSNIGVPGLILILVIALVIFGPKKLPEIGRAFGETLREFKKSTKGLRD 49
>sp|Q7W2X4|TATB_BORPA Sec-independent protein translocase protein TatB OS=Bordetella
parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
GN=tatB PE=3 SV=1
Length = 151
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 122 LFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLERE 181
+F V E +VIGV+AL+V GP+ L +VAR +G L Q R + DV KS + RE
Sbjct: 1 MFDVSFTELMVIGVIALVVIGPERLPKVARTIGHLLGRAQ---RYVNDV----KSDIRRE 53
Query: 182 IGLDDISTSTQNPNNLNRTDTMSTPPSVTSTEDS 215
I LD++ + R S S+ TED+
Sbjct: 54 IELDELRKFKDEMDETAR----SMQTSLRETEDT 83
>sp|Q1GFN7|TATB_RUEST Sec-independent protein translocase protein TatB OS=Ruegeria sp.
(strain TM1040) GN=tatB PE=3 SV=1
Length = 162
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 122 LFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLE-- 179
+F +G E LVIGVVAL+V GPK L ++ RN+G+ + + + ++REF +E
Sbjct: 1 MFDLGWTELLVIGVVALIVVGPKDLPKLFRNVGR-------FVGKARGMAREFSRAMEDA 53
Query: 180 -REIGLDDISTSTQNPNN 196
E G+ DI + + N
Sbjct: 54 ADEAGVSDIQKTFKTATN 71
>sp|Q3SI72|TATB_THIDA Sec-independent protein translocase protein TatB OS=Thiobacillus
denitrificans (strain ATCC 25259) GN=tatB PE=3 SV=1
Length = 149
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 122 LFGVGAPEALVIGVVALLVFGPKGLAEVARNLGK---TLRAFQPTIRELQDVSREFKSTL 178
+F +G E +VIG+VAL+V GP+ L +VAR G ++ + T+R D+SRE +
Sbjct: 1 MFDIGFTELIVIGIVALVVVGPERLPKVARAAGHLYGRMQRYVSTVRS--DISREMQLDE 58
Query: 179 EREIGLD 185
R +G D
Sbjct: 59 MRRVGQD 65
>sp|Q2YAV5|TATB_NITMU Sec-independent protein translocase protein TatB OS=Nitrosospira
multiformis (strain ATCC 25196 / NCIMB 11849) GN=tatB
PE=3 SV=1
Length = 147
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 122 LFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLERE 181
+F + E LVI VAL+V GP+ L +VAR LG Q R + DV KS ++RE
Sbjct: 1 MFDISFSEILVIAAVALIVIGPERLPKVARTLGHVFGWAQ---RYVNDV----KSDIQRE 53
Query: 182 IGLDDI 187
I LD++
Sbjct: 54 IELDEL 59
>sp|A6TLZ3|TATA_ALKMQ Sec-independent protein translocase protein TatA OS=Alkaliphilus
metalliredigens (strain QYMF) GN=tatA PE=3 SV=1
Length = 69
Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 122 LFG-VGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQ-DVSREFKSTLE 179
+FG +G PE ++I VAL++FGP L E+ ++LGK+++ F+ +E++ D+S E + T +
Sbjct: 1 MFGKLGMPELVLIFAVALVIFGPSKLPEIGKSLGKSIKEFKKFSKEMKDDLSLEERETKD 60
Query: 180 RE 181
++
Sbjct: 61 KD 62
>sp|Q5LQ14|TATB_RUEPO Sec-independent protein translocase protein TatB OS=Ruegeria
pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
GN=tatB PE=3 SV=1
Length = 152
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 122 LFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLERE 181
+F +G E LVIGVVAL+V GPK L + RN+G+ + + RE SR + E
Sbjct: 1 MFDLGWSELLVIGVVALIVVGPKDLPVLFRNVGRWVGKARGLAREF---SRAMNDAAD-E 56
Query: 182 IGLDDISTSTQNPNN 196
G+ DIS + N
Sbjct: 57 AGVKDISKGLKAATN 71
>sp|C4LIK7|TATA_CORK4 Sec-independent protein translocase protein TatA OS=Corynebacterium
kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=tatA
PE=3 SV=1
Length = 91
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 122 LFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLERE 181
+ +G PE ++I VV L++FG K L + AR++G+++R F+ + E+++ E + T
Sbjct: 1 MANLGFPELVLIAVVILVLFGWKKLPDAARSVGRSMRIFKSEVSEMKNDGAEAEKTSAAS 60
Query: 182 IGLDDIS--TSTQNP 194
D+I+ +ST P
Sbjct: 61 TKTDEITSVSSTDTP 75
>sp|Q07N50|TATB_RHOP5 Sec-independent protein translocase protein TatB
OS=Rhodopseudomonas palustris (strain BisA53) GN=tatB
PE=3 SV=1
Length = 175
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 19/110 (17%)
Query: 122 LFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRA-----------FQPTIR--ELQ 168
+F +G E +VIGVVAL+ GPK L V R +G+ + FQ +R E+
Sbjct: 1 MFDIGWSELMVIGVVALIAIGPKELPGVLRMVGQWMGKARKLAGEFQGQFQEAMREAEMA 60
Query: 169 DVSREFKSTLEREIGL--DDISTSTQNPNN----LNRTDTMSTPPSVTST 212
D+ + F G +++ TS Q + +++ + TPP+V +T
Sbjct: 61 DLKKSFDEVKSAATGFTENNVLTSLQKDVDAAMTIDKVQNIDTPPAVPTT 110
>sp|P66889|TATA_MYCTU Sec-independent protein translocase protein TatA OS=Mycobacterium
tuberculosis GN=tatA PE=3 SV=1
Length = 83
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 17/84 (20%)
Query: 132 VIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDDISTST 191
++ VV +++FG K L + AR+LGK+LR F+ +RELQ+ ++ + S T
Sbjct: 11 ILAVVVIVLFGAKKLPDAARSLGKSLRIFKSEVRELQNENKA------------EASIET 58
Query: 192 QNPNNLNRTDTMSTPPSVTSTEDS 215
P R D PS S +DS
Sbjct: 59 PTPVQSQRVD-----PSAASGQDS 77
>sp|A5U4C0|TATA_MYCTA Sec-independent protein translocase protein TatA OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=tatA PE=3
SV=1
Length = 83
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 17/84 (20%)
Query: 132 VIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDDISTST 191
++ VV +++FG K L + AR+LGK+LR F+ +RELQ+ ++ + S T
Sbjct: 11 ILAVVVIVLFGAKKLPDAARSLGKSLRIFKSEVRELQNENKA------------EASIET 58
Query: 192 QNPNNLNRTDTMSTPPSVTSTEDS 215
P R D PS S +DS
Sbjct: 59 PTPVQSQRVD-----PSAASGQDS 77
>sp|C1AQ13|TATA_MYCBT Sec-independent protein translocase protein TatA OS=Mycobacterium
bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019)
GN=tatA PE=3 SV=1
Length = 83
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 17/84 (20%)
Query: 132 VIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDDISTST 191
++ VV +++FG K L + AR+LGK+LR F+ +RELQ+ ++ + S T
Sbjct: 11 ILAVVVIVLFGAKKLPDAARSLGKSLRIFKSEVRELQNENKA------------EASIET 58
Query: 192 QNPNNLNRTDTMSTPPSVTSTEDS 215
P R D PS S +DS
Sbjct: 59 PTPVQSQRVD-----PSAASGQDS 77
>sp|A1KKE0|TATA_MYCBP Sec-independent protein translocase protein TatA OS=Mycobacterium
bovis (strain BCG / Pasteur 1173P2) GN=tatA PE=3 SV=1
Length = 83
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 17/84 (20%)
Query: 132 VIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDDISTST 191
++ VV +++FG K L + AR+LGK+LR F+ +RELQ+ ++ + S T
Sbjct: 11 ILAVVVIVLFGAKKLPDAARSLGKSLRIFKSEVRELQNENKA------------EASIET 58
Query: 192 QNPNNLNRTDTMSTPPSVTSTEDS 215
P R D PS S +DS
Sbjct: 59 PTPVQSQRVD-----PSAASGQDS 77
>sp|P66890|TATA_MYCBO Sec-independent protein translocase protein TatA OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=tatA PE=3
SV=1
Length = 83
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 17/84 (20%)
Query: 132 VIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDDISTST 191
++ VV +++FG K L + AR+LGK+LR F+ +RELQ+ ++ + S T
Sbjct: 11 ILAVVVIVLFGAKKLPDAARSLGKSLRIFKSEVRELQNENKA------------EASIET 58
Query: 192 QNPNNLNRTDTMSTPPSVTSTEDS 215
P R D PS S +DS
Sbjct: 59 PTPVQSQRVD-----PSAASGQDS 77
>sp|Q1IP20|TATA_KORVE Sec-independent protein translocase protein TatA OS=Koribacter
versatilis (strain Ellin345) GN=tatA PE=3 SV=1
Length = 55
Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 122 LFG-VGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRE 166
+FG +G PE L I +ALL+FGPK L ++ + LG+ +R F+ +R+
Sbjct: 1 MFGELGVPEVLFILGIALLIFGPKKLGDLGKGLGEGVRGFKSALRD 46
>sp|A1KAU9|TATB_AZOSB Sec-independent protein translocase protein TatB OS=Azoarcus sp.
(strain BH72) GN=tatB PE=3 SV=1
Length = 142
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 30/131 (22%)
Query: 122 LFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLERE 181
+F G E +VIGVV L+V GP+ L +VAR G L Q R + DV KS ++RE
Sbjct: 1 MFDFGFSELVVIGVVMLIVVGPERLPKVARTAGHLLGRLQ---RYVSDV----KSDIQRE 53
Query: 182 IGLDDI----------------STSTQNPNNLNRTDTM-------STPPSVTSTEDSQTV 218
+ L+++ S T+ + D + + PP T++ +SQ
Sbjct: 54 MQLEELKKLQQQVQQQAQALESSVRTEVAQVESSVDQVVAAIKADAAPPDNTTSAESQAA 113
Query: 219 ADPNGAASANK 229
ADP S+ +
Sbjct: 114 ADPAAVDSSQQ 124
>sp|Q89KZ8|TATB_BRAJA Sec-independent protein translocase protein TatB OS=Bradyrhizobium
japonicum (strain USDA 110) GN=tatB PE=3 SV=1
Length = 175
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 16/107 (14%)
Query: 122 LFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRA-----------FQPTIR--ELQ 168
+F +G E ++IGVVAL+ GPK L V R +G+ + FQ +R E+
Sbjct: 1 MFDIGWSELVLIGVVALIAIGPKELPGVLRMVGQWMGKARKMAAEFQGQFQEAMREAEMA 60
Query: 169 DVSREFKSTLEREIGL--DDISTSTQ-NPNNLNRTDTMSTPPSVTST 212
D+ + F E G +++ TS Q + ++ R D + P +ST
Sbjct: 61 DLKKSFDEVKEAASGFAGNNLMTSLQKDVSDALRVDALDKPAETSST 107
>sp|A0PQS8|TATA_MYCUA Sec-independent protein translocase protein TatA OS=Mycobacterium
ulcerans (strain Agy99) GN=tatA PE=3 SV=1
Length = 88
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 17/92 (18%)
Query: 132 VIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDDISTST 191
++ VV +++FG K L + AR+LGK++R F+ +RE+Q ++ S +E T+T
Sbjct: 11 ILAVVVIVLFGAKKLPDAARSLGKSMRIFKSEMREMQSETKAEPSAIE---------TNT 61
Query: 192 QNPNNL--NRTDTMSTPPSVTSTEDSQTVADP 221
NP + R D P+ + +D QT A P
Sbjct: 62 ANPTPVQSQRID-----PAAATGQD-QTEARP 87
>sp|B2HFV1|TATA_MYCMM Sec-independent protein translocase protein TatA OS=Mycobacterium
marinum (strain ATCC BAA-535 / M) GN=tatA PE=3 SV=1
Length = 88
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 17/92 (18%)
Query: 132 VIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDDISTST 191
++ VV +++FG K L + AR+LGK++R F+ +RE+Q ++ S +E T+T
Sbjct: 11 ILAVVVIVLFGAKKLPDAARSLGKSMRIFKSEMREMQSETKAEPSAIE---------TNT 61
Query: 192 QNPNNL--NRTDTMSTPPSVTSTEDSQTVADP 221
NP + R D P+ + +D QT A P
Sbjct: 62 ANPTPVQSQRID-----PAAATGQD-QTEARP 87
>sp|Q73YX3|TATA_MYCPA Sec-independent protein translocase protein TatA OS=Mycobacterium
paratuberculosis (strain ATCC BAA-968 / K-10) GN=tatA
PE=3 SV=1
Length = 93
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 132 VIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTL 178
++ VV +L+FG K L + AR+LGK++R F+ +RE+Q ++ S L
Sbjct: 11 ILAVVVILLFGAKKLPDAARSLGKSMRIFKSELREMQSENKTETSAL 57
>sp|A0QFC0|TATA_MYCA1 Sec-independent protein translocase protein TatA OS=Mycobacterium
avium (strain 104) GN=tatA PE=3 SV=1
Length = 93
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 132 VIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTL 178
++ VV +L+FG K L + AR+LGK++R F+ +RE+Q ++ S L
Sbjct: 11 ILAVVVILLFGAKKLPDAARSLGKSMRIFKSELREMQSENKTETSAL 57
>sp|Q6HJB9|TATA_BACHK Sec-independent protein translocase protein TatA OS=Bacillus
thuringiensis subsp. konkukian (strain 97-27) GN=tatA
PE=3 SV=1
Length = 61
Score = 44.7 bits (104), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 125 VGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
+G P ++I V L++FGPK L E+ + LG+TL+ F+ + +EL D + + K E+
Sbjct: 5 IGFPGLILILVAVLILFGPKKLPEIGKALGETLKEFKKSTKELTDDAFQEKEKKEK 60
>sp|Q63BU9|TATA_BACCZ Sec-independent protein translocase protein TatA OS=Bacillus cereus
(strain ZK / E33L) GN=tatA PE=3 SV=1
Length = 61
Score = 44.7 bits (104), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 125 VGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
+G P ++I V L++FGPK L E+ + LG+TL+ F+ + +EL D + + K E+
Sbjct: 5 IGFPGLILILVAVLILFGPKKLPEIGKALGETLKEFKKSTKELTDDAFQEKEKKEK 60
>sp|Q81DZ9|TATA_BACCR Sec-independent protein translocase protein TatA OS=Bacillus cereus
(strain ATCC 14579 / DSM 31) GN=tatA PE=3 SV=1
Length = 61
Score = 44.7 bits (104), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 125 VGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
+G P ++I V L++FGPK L E+ + LG+TL+ F+ + +EL D + + K E+
Sbjct: 5 IGFPGLILILVAVLILFGPKKLPEIGKALGETLKEFKKSTKELTDDAFQEKEKKEK 60
>sp|B9IZP6|TATA_BACCQ Sec-independent protein translocase protein TatA OS=Bacillus cereus
(strain Q1) GN=tatA PE=3 SV=1
Length = 61
Score = 44.7 bits (104), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 125 VGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
+G P ++I V L++FGPK L E+ + LG+TL+ F+ + +EL D + + K E+
Sbjct: 5 IGFPGLILILVAVLILFGPKKLPEIGKALGETLKEFKKSTKELTDDAFQEKEKKEK 60
>sp|B7HQ38|TATA_BACC7 Sec-independent protein translocase protein TatA OS=Bacillus cereus
(strain AH187) GN=tatA PE=3 SV=1
Length = 61
Score = 44.7 bits (104), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 125 VGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
+G P ++I V L++FGPK L E+ + LG+TL+ F+ + +EL D + + K E+
Sbjct: 5 IGFPGLILILVAVLILFGPKKLPEIGKALGETLKEFKKSTKELTDDAFQEKEKKEK 60
>sp|B7H502|TATA_BACC4 Sec-independent protein translocase protein TatA OS=Bacillus cereus
(strain B4264) GN=tatA PE=3 SV=1
Length = 61
Score = 44.7 bits (104), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 125 VGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
+G P ++I V L++FGPK L E+ + LG+TL+ F+ + +EL D + + K E+
Sbjct: 5 IGFPGLILILVAVLILFGPKKLPEIGKALGETLKEFKKSTKELTDDAFQEKEKKEK 60
>sp|C1ETB0|TATA_BACC3 Sec-independent protein translocase protein TatA OS=Bacillus cereus
(strain 03BB102) GN=tatA PE=3 SV=1
Length = 61
Score = 44.7 bits (104), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 125 VGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
+G P ++I V L++FGPK L E+ + LG+TL+ F+ + +EL D + + K E+
Sbjct: 5 IGFPGLILILVAVLILFGPKKLPEIGKALGETLKEFKKSTKELTDDAFQEKEKKEK 60
>sp|B7IV78|TATA_BACC2 Sec-independent protein translocase protein TatA OS=Bacillus cereus
(strain G9842) GN=tatA PE=3 SV=1
Length = 61
Score = 44.7 bits (104), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 125 VGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
+G P ++I V L++FGPK L E+ + LG+TL+ F+ + +EL D + + K E+
Sbjct: 5 IGFPGLILILVAVLILFGPKKLPEIGKALGETLKEFKKSTKELTDDAFQEKEKKEK 60
>sp|Q738X1|TATA_BACC1 Sec-independent protein translocase protein TatA OS=Bacillus cereus
(strain ATCC 10987) GN=tatA PE=3 SV=1
Length = 61
Score = 44.7 bits (104), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 125 VGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
+G P ++I V L++FGPK L E+ + LG+TL+ F+ + +EL D + + K E+
Sbjct: 5 IGFPGLILILVAVLILFGPKKLPEIGKALGETLKEFKKSTKELTDDAFQEKEKKEK 60
>sp|B7JMH1|TATA_BACC0 Sec-independent protein translocase protein TatA OS=Bacillus cereus
(strain AH820) GN=tatA PE=3 SV=1
Length = 61
Score = 44.7 bits (104), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 125 VGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
+G P ++I V L++FGPK L E+ + LG+TL+ F+ + +EL D + + K E+
Sbjct: 5 IGFPGLILILVAVLILFGPKKLPEIGKALGETLKEFKKSTKELTDDAFQEKEKKEK 60
>sp|Q81R17|TATA_BACAN Sec-independent protein translocase protein TatA OS=Bacillus
anthracis GN=tatA PE=3 SV=1
Length = 61
Score = 44.7 bits (104), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 125 VGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLER 180
+G P ++I V L++FGPK L E+ + LG+TL+ F+ + +EL D + + K E+
Sbjct: 5 IGFPGLILILVAVLILFGPKKLPEIGKALGETLKEFKKSTKELTDDAFQEKEKKEK 60
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.125 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,588,486
Number of Sequences: 539616
Number of extensions: 4154194
Number of successful extensions: 26304
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 324
Number of HSP's that attempted gapping in prelim test: 24940
Number of HSP's gapped (non-prelim): 1468
length of query: 287
length of database: 191,569,459
effective HSP length: 116
effective length of query: 171
effective length of database: 128,974,003
effective search space: 22054554513
effective search space used: 22054554513
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)