Your job contains 1 sequence.
>023113
MGEKDDGLGLSLSLGCAARNEPSLRLNHMPLSSSQSMQNHHKRSPWTELFHSSDRNSDTR
SFLRGIDVNQAPTVADCEEENGVSSPNSTVSSISGKRSEREPIGDETEAERASCSRGSDD
EDGGAGDASRKKLRLSKEQSLLLEETFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRR
ARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRSLKLSPQLYMNMNPPTTLTMCPS
CERVAVSSSSSSSSAAANGTTRLPIGPNHQRLTPVSPWAALPIHHRS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023113
(287 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ... 589 5.4e-65 2
TAIR|locus:2129136 - symbol:HB-2 "homeobox protein 2" spe... 562 1.6e-57 2
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper... 525 1.7e-50 1
TAIR|locus:2171489 - symbol:HAT2 species:3702 "Arabidopsi... 522 3.6e-50 1
TAIR|locus:2129061 - symbol:HAT1 species:3702 "Arabidopsi... 516 1.5e-49 1
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop... 445 5.2e-42 1
TAIR|locus:2137599 - symbol:HAT22 species:3702 "Arabidops... 421 1.8e-39 1
TAIR|locus:2059143 - symbol:HAT9 species:3702 "Arabidopsi... 395 1.0e-36 1
TAIR|locus:2049614 - symbol:HB17 "homeobox-leucine zipper... 321 7.1e-29 1
TAIR|locus:2013980 - symbol:HB18 "homeobox-leucine zipper... 279 2.0e-24 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 160 1.8e-12 2
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 146 1.9e-08 1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 136 1.7e-07 1
TAIR|locus:2084228 - symbol:HB-1 "homeobox 1" species:370... 136 3.0e-07 1
TAIR|locus:2115215 - symbol:HB40 "homeobox protein 40" sp... 129 9.7e-07 1
TAIR|locus:2046263 - symbol:HB21 "homeobox protein 21" sp... 129 1.1e-06 1
TAIR|locus:2102107 - symbol:HB20 "homeobox protein 20" sp... 131 1.5e-06 1
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 128 2.6e-06 1
TAIR|locus:2150901 - symbol:HB-3 "homeobox 3" species:370... 125 9.9e-06 1
TAIR|locus:2041283 - symbol:HB6 "homeobox protein 6" spec... 123 1.7e-05 1
TAIR|locus:2168225 - symbol:HB5 "homeobox protein 5" spec... 123 1.7e-05 1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 110 2.2e-05 1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3... 118 3.4e-05 1
TAIR|locus:2140055 - symbol:HB16 "homeobox protein 16" sp... 119 4.5e-05 1
TAIR|locus:2040520 - symbol:HB22 "homeobox protein 22" sp... 111 9.6e-05 1
TAIR|locus:2173669 - symbol:HB53 "homeobox 53" species:37... 110 0.00029 1
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 589 (212.4 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 132/248 (53%), Positives = 151/248 (60%)
Query: 52 SSDRNSDTRSFLRGIDVNQAPT---VADCEEENGVXXX-XXXXXXXXGKRSEREPI--GD 105
+++RNSD SFLRG +VN+A + V D EEE V G + + GD
Sbjct: 73 TAERNSDAGSFLRGFNVNRAQSSVAVVDLEEEAAVVSSPNSAVSSLSGNKRDLAVARGGD 132
Query: 106 ETEAERASCSRXXXXXXXXXXXX-----XRKKLRLSKEQSLLLEETFKEHSTXXXXXXXX 160
E EAERASCSR RKKLRLSK+Q+L+LEETFKEHST
Sbjct: 133 ENEAERASCSRGGGSGGSDDEDGGNGDGSRKKLRLSKDQALVLEETFKEHSTLNPKQKLA 192
Query: 161 XXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRSLK 220
R RQVEVWFQNRRARTKLKQTEVDCEYLKRCC+NLTEENRRLQKEV ELR+LK
Sbjct: 193 LAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRALK 252
Query: 221 LSPQLYMNMNPPTTLTMCPSCERXXXXXXXXXXXXXXNGTTRLPIG-PNHQRLTPVSPWA 279
LSP LYM+M PPTTLTMCPSCER TT +G P+ QRLTP W
Sbjct: 253 LSPHLYMHMTPPTTLTMCPSCERVSSSAATVTAAPSTT-TTPTVVGRPSPQRLTP---WT 308
Query: 280 ALPIHHRS 287
A+ + +S
Sbjct: 309 AISLQQKS 316
Score = 91 (37.1 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 28/67 (41%), Positives = 34/67 (50%)
Query: 1 MGEKDDXXXXXXXXXCAARNEPSLRLNHMPL---SSSQSMQNHHKRS----P-------W 46
MGE+DD + + EPSLRLN MPL SSS S Q+ H ++ P W
Sbjct: 1 MGERDDGLGLSLSLGNSQQKEPSLRLNLMPLTTSSSSSSFQHMHNQNNNSHPQKIHNISW 60
Query: 47 TELFHSS 53
T LF SS
Sbjct: 61 THLFQSS 67
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 562 (202.9 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 129/249 (51%), Positives = 156/249 (62%)
Query: 1 MGEKDDXXXXXXXXXCAARNEPSLRLN-HMPLSSSQSMQNHHKRSPWTELFHSSDRNSD- 58
M EKDD + + +L+ N + ++ S S +RS W E F SS NSD
Sbjct: 2 MFEKDDLGLSLGLNF--PKKQINLKSNPSVSVTPSSSSFGLFRRSSWNESFTSSVPNSDS 59
Query: 59 ----TRSFLRGIDVNQAPTVADC-EEENGVXXXXXXXXXXXGKRSEREPIGDETEAERAS 113
TR+F+RGIDVN+ P+ A+ +E+ GV GKRSERE ++T+ +
Sbjct: 60 SQKETRTFIRGIDVNRPPSTAEYGDEDAGVSSPNSTVSSSTGKRSERE---EDTDPQG-- 114
Query: 114 CSRXXXXXXXXXXXXXRKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVE 173
SR RKKLRLSK+QS +LEETFK+HST R RQVE
Sbjct: 115 -SRGISDDEDGDNS--RKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVE 171
Query: 174 VWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRSLKLSPQLYMNMNPPT 233
VWFQNRRARTKLKQTEVDCE+L+RCCENLTEENRRLQKEV ELR+LKLSPQ YM+M+PPT
Sbjct: 172 VWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRALKLSPQFYMHMSPPT 231
Query: 234 TLTMCPSCE 242
TLTMCPSCE
Sbjct: 232 TLTMCPSCE 240
Score = 47 (21.6 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 261 TRLPIGPN--HQRLTPVSPWAALPIHHRS 287
T L + P+ H + P P AA HHRS
Sbjct: 231 TTLTMCPSCEHVSVPPPQPQAATSAHHRS 259
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 123/251 (49%), Positives = 145/251 (57%)
Query: 52 SSDRNSDTRSFLRGIDVNQAPTVADCEEEN-GVXX-XXXXXXXXXGKRSERE------PI 103
+SD S R ++ + V D E+E GV GK+SERE +
Sbjct: 69 NSDMRSFLRGI--DVNRAPSTVVVDVEDEGAGVSSPNSTVSSVMSGKKSERELMAAAGAV 126
Query: 104 G----DETEAERASCSRXXXXXXXXXXX----XXRKKLRLSKEQSLLLEETFKEHSTXXX 155
G ++ E ERASCS RKKLRLSKEQ+L+LEETFKEHST
Sbjct: 127 GGGRVEDNEIERASCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNP 186
Query: 156 XXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQE 215
R RQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLT+ENRRLQKEV E
Sbjct: 187 KQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSE 246
Query: 216 LRSLKLSPQLYMNMNPPTTLTMCPSCERXXXXXXXXXXXXXXNGTTRLPIGPNHQRLTPV 275
LR+LKLSP LYM+M PPTTLTMCPSCER + + P+ + + P+
Sbjct: 247 LRALKLSPHLYMHMKPPTTLTMCPSCERVAVTSS--------SSSVAPPVMNSSSPMGPM 298
Query: 276 SPWAALPIHHR 286
SPWAA+P+ R
Sbjct: 299 SPWAAMPLRQR 309
Score = 190 (71.9 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 60/142 (42%), Positives = 75/142 (52%)
Query: 1 MGEKDDXXXXXXXXXCAA-RNEPSLRLNHMPL----SSS--QSMQ----NHHKR--SPWT 47
M E+DD + +PS RLN MPL SSS Q MQ NH ++ + W
Sbjct: 1 MSERDDGLGLSLSLSLGFNQKDPSSRLNPMPLASYASSSHMQHMQQSNYNHPQKIQNTWI 60
Query: 48 ELFHSSDRNSDTRSFLRGIDVNQAPT--VADCEEEN-GVXX-XXXXXXXXXGKRSERE-- 101
+F SS+RNSD RSFLRGIDVN+AP+ V D E+E GV GK+SERE
Sbjct: 61 NMFQSSERNSDMRSFLRGIDVNRAPSTVVVDVEDEGAGVSSPNSTVSSVMSGKKSERELM 120
Query: 102 ----PIG----DETEAERASCS 115
+G ++ E ERASCS
Sbjct: 121 AAAGAVGGGRVEDNEIERASCS 142
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 121/237 (51%), Positives = 138/237 (58%)
Query: 18 ARNEPSLRLNHMPLSSSQSMQNHHKRSPWTELFHSSDRNSDTRSFLRGIDVNQAPTVADC 77
++N L++N L+ + S+ N+ +R PW + F D SD LR IDVN P+ +C
Sbjct: 17 SQNHNPLQMN---LNPNSSLSNNLQRLPWNQTF---DPTSD----LRKIDVNSFPSTVNC 66
Query: 78 EEENGVXX-XXXXXXXXXGKRSEREPIG----------DETEAERASCSRXXXXXXXXXX 126
EE+ GV GKRSERE I DE +R SR
Sbjct: 67 EEDTGVSSPNSTISSTISGKRSEREGISGTGVGSGDDHDEITPDRGY-SRGTSDEEEDGG 125
Query: 127 XXXRKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLK 186
RKKLRLSK+QS LEETFKEH+T RQVEVWFQNRRARTKLK
Sbjct: 126 ETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLK 185
Query: 187 QTEVDCEYLKRCCENLTEENRRLQKEVQELRSLKLSPQLYMNMNPPTTLTMCPSCER 243
QTEVDCEYLKRC E LTEENRRLQKE ELR+LKLSPQ Y M PPTTL MCPSCER
Sbjct: 186 QTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSPQFYGQMTPPTTLIMCPSCER 242
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 122/237 (51%), Positives = 142/237 (59%)
Query: 18 ARNEPSLRLNHMPLSSSQSMQNHHKRSPWTE-LFHSSDRNSDTRSFLRGIDVNQAPTVAD 76
A+N P L+LN P SS S + + PW + L SSD+ + FLR IDVN PT D
Sbjct: 17 AQNHP-LQLNLKPTSSPMS---NLQMFPWNQTLVSSSDQQK--QQFLRKIDVNSLPTTVD 70
Query: 77 CEEENGVXX-XXXXXXXXXGKR--SEREPI-----GDETEA--ERASCSRXXXXXXXXXX 126
EEE GV GKR +ERE GD+ + +R+S
Sbjct: 71 LEEETGVSSPNSTISSTVSGKRRSTEREGTSGGGCGDDLDITLDRSSSRGTSDEEEDYGG 130
Query: 127 XXXRKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLK 186
RKKLRLSK+QS +LE+TFKEH+T RQVEVWFQNRRARTKLK
Sbjct: 131 ETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLK 190
Query: 187 QTEVDCEYLKRCCENLTEENRRLQKEVQELRSLKLSPQLYMNMNPPTTLTMCPSCER 243
QTEVDCEYLKRC E LTEENRRL+KE ELR+LKLSP+LY M+PPTTL MCPSCER
Sbjct: 191 QTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKLSPRLYGQMSPPTTLLMCPSCER 247
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 97/176 (55%), Positives = 108/176 (61%)
Query: 96 KRSEREPIGDETEAERASCSRXXXXXXXXXXXXXRKKLRLSKEQSLLLEETFKEHSTXXX 155
+RS + I DE E S SR RKKLRLSK+QS LE++FKEHST
Sbjct: 158 RRSNKRDIDDEVER---SASRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNP 214
Query: 156 XXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQE 215
RPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCE+LTEENRRLQKEV+E
Sbjct: 215 KQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKE 274
Query: 216 LRSLKLSPQLYMNMNPPTTLTMCPSCERXXXXXXXXXXXXXXN---GTTRL-PIGP 267
LR+LK S YM + P TTLTMCPSCER N T+ L P+ P
Sbjct: 275 LRTLKTSTPFYMQL-PATTLTMCPSCERVATSAAQPSTSAAHNLCLSTSSLIPVKP 329
>TAIR|locus:2137599 [details] [associations]
symbol:HAT22 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
Length = 278
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 86/143 (60%), Positives = 98/143 (68%)
Query: 101 EPIGDETEAERASCSRXXXXXXXXXXXXXRKKLRLSKEQSLLLEETFKEHSTXXXXXXXX 160
E +ET ER CSR RKKLRL+K+QS LLE+ FK HST
Sbjct: 97 EEEAEET-TERVVCSRVSDDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQA 155
Query: 161 XXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRSLK 220
RPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCE LT+ENRRLQKE+Q+L++LK
Sbjct: 156 LARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALK 215
Query: 221 LSPQLYMNMNPPTTLTMCPSCER 243
LS YM+M P TLTMCPSCER
Sbjct: 216 LSQPFYMHM-PAATLTMCPSCER 237
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 82/148 (55%), Positives = 99/148 (66%)
Query: 97 RSEREPIGDETEAERASCSRXXXXXXXXXXX-XXRKKLRLSKEQSLLLEETFKEHSTXXX 155
+ ER+ G+E+ E R RKKLRL+K+QS LLEE+FK+HST
Sbjct: 79 KRERDG-GEESPEEEEMTERVISDYHEDEEGISARKKLRLTKQQSALLEESFKDHSTLNP 137
Query: 156 XXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQE 215
RPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCE L +EN RLQKE+QE
Sbjct: 138 KQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQE 197
Query: 216 LRSLKLSPQLYMNMNPPTTLTMCPSCER 243
L++LKL+ YM+M P +TLT CPSCER
Sbjct: 198 LKTLKLTQPFYMHM-PASTLTKCPSCER 224
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 63/114 (55%), Positives = 83/114 (72%)
Query: 130 RKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTE 189
RKKLRL++EQS LLE++F+++ T RPRQ+EVWFQNRRAR+KLKQTE
Sbjct: 138 RKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTE 197
Query: 190 VDCEYLKRCCENLTEENRRLQKEVQELRSLKLSPQLYMNMNPPTTLTMCPSCER 243
++CEYLKR +LTEEN RL +EV+ELR++K+ P +N ++LTMCP CER
Sbjct: 198 MECEYLKRWFGSLTEENHRLHREVEELRAMKVGPT---TVNSASSLTMCPRCER 248
>TAIR|locus:2013980 [details] [associations]
symbol:HB18 "homeobox-leucine zipper protein 18"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AC008148 EMBL:AK118149 EMBL:BT005594 EMBL:AK175837
EMBL:AK175965 IPI:IPI00520212 RefSeq:NP_177248.3 UniGene:At.35255
HSSP:Q6B2C0 ProteinModelPortal:Q8GXM7 SMR:Q8GXM7
EnsemblPlants:AT1G70920.1 GeneID:843431 KEGG:ath:AT1G70920
GeneFarm:3959 TAIR:At1g70920 eggNOG:NOG312506 InParanoid:Q8GXM7
OMA:HTEMECE PhylomeDB:Q8GXM7 ProtClustDB:CLSN2918454
Genevestigator:Q8GXM7 GermOnline:AT1G70920 Uniprot:Q8GXM7
Length = 206
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 63/114 (55%), Positives = 75/114 (65%)
Query: 130 RKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTE 189
RKKLRL+KEQS LLEE+F ++ T RQVEVWFQNRRAR+KLK TE
Sbjct: 68 RKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTE 127
Query: 190 VDCEYLKRCCENLTEENRRLQKEVQELRSLKLSPQLYMNMNPPTTLTMCPSCER 243
++CEYLKR +L E+NRRLQ EV+ELR+LK S + LTMCP CER
Sbjct: 128 MECEYLKRWFGSLKEQNRRLQIEVEELRALKPSST--------SALTMCPRCER 173
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 160 (61.4 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 131 KKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEV 190
KK RL+ EQ LE+ F+ + +PRQ+ +WFQNRRAR+K KQ E
Sbjct: 71 KKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSKTKQLEK 130
Query: 191 DCEYLKRCCENLTEENRRLQKEVQELRS 218
D + LKR E+L +EN LQ + Q+L++
Sbjct: 131 DYDMLKRQFESLRDENEVLQTQNQKLQA 158
Score = 37 (18.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 215 ELRSLKLSPQLYMNMNPPTTLTM 237
++R ++ Q + +PPTT TM
Sbjct: 192 DIRPPEIDSQFALG-HPPTTTTM 213
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 146 (56.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 45/150 (30%), Positives = 63/150 (42%)
Query: 69 NQAPTVADCEEENGVXXXXXXXXXXXGKRSEREPIGDETEAERASCSRXXXXXXXXXXXX 128
+Q+P++A + GKRS E D E +
Sbjct: 26 HQSPSLAPLLPSCSLPQDLHGFASFLGKRSPMEGCCD---LETGNNMNGEEDYSDDGSQM 82
Query: 129 XRKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQT 188
KK RL+ EQ LE+ F+ + +PRQ+ +WFQNRRAR K KQ
Sbjct: 83 GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQL 142
Query: 189 EVDCEYLKRCCENLTEENRRLQKEVQELRS 218
E D + LKR + L EN LQ Q+L++
Sbjct: 143 EKDYDTLKRQFDTLKAENDLLQTHNQKLQA 172
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 136 (52.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 131 KKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEV 190
KK RL+ Q LE +F+E +PRQ+ VWFQNRRAR K KQ E
Sbjct: 77 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQ 136
Query: 191 DCEYLKRCCENLTEENRRLQKEVQELRSL 219
+ L++ + ++ E + L EV++LR+L
Sbjct: 137 LYDSLRQEYDVVSREKQMLHDEVKKLRAL 165
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 136 (52.9 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 34/88 (38%), Positives = 45/88 (51%)
Query: 131 KKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEV 190
KK RL+ EQ LLE++F+ + +PRQV VWFQNRRAR K KQ E
Sbjct: 68 KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 127
Query: 191 DCEYLKRCCENLTEENRRLQKEVQELRS 218
D + LK + L + + +LRS
Sbjct: 128 DYDLLKSTYDQLLSNYDSIVMDNDKLRS 155
>TAIR|locus:2115215 [details] [associations]
symbol:HB40 "homeobox protein 40" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
Length = 216
Score = 129 (50.5 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 31/87 (35%), Positives = 45/87 (51%)
Query: 131 KKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEV 190
+K +L+ EQ +LE +F + PRQV VWFQNRRAR K K+ E
Sbjct: 55 RKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEE 114
Query: 191 DCEYLKRCCENLTEENRRLQKEVQELR 217
+ LK +N+ + RL+ EV +L+
Sbjct: 115 EYNKLKNSHDNVVVDKCRLESEVIQLK 141
>TAIR|locus:2046263 [details] [associations]
symbol:HB21 "homeobox protein 21" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006950 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HSSP:P01366 EMBL:AC006135
EMBL:BT031362 IPI:IPI00520845 PIR:F84565 RefSeq:NP_179445.1
UniGene:At.52810 ProteinModelPortal:Q9ZU70 SMR:Q9ZU70
EnsemblPlants:AT2G18550.1 GeneID:816370 KEGG:ath:AT2G18550
GeneFarm:3961 TAIR:At2g18550 eggNOG:NOG270330 HOGENOM:HOG000034122
InParanoid:Q9ZU70 OMA:RVEDEYT PhylomeDB:Q9ZU70
ProtClustDB:CLSN2683051 ArrayExpress:Q9ZU70 Genevestigator:Q9ZU70
GermOnline:AT2G18550 Uniprot:Q9ZU70
Length = 220
Score = 129 (50.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 33/87 (37%), Positives = 42/87 (48%)
Query: 131 KKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEV 190
+K +LS EQ +LE +F++ PRQV VWFQNRRAR K K+ E
Sbjct: 61 RKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVED 120
Query: 191 DCEYLKRCCENLTEENRRLQKEVQELR 217
+ LK E E RL EV L+
Sbjct: 121 EYTKLKNAYETTVVEKCRLDSEVIHLK 147
>TAIR|locus:2102107 [details] [associations]
symbol:HB20 "homeobox protein 20" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
Length = 286
Score = 131 (51.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 34/94 (36%), Positives = 50/94 (53%)
Query: 131 KKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEV 190
KK RL EQ LE++F+ + +PRQ+ +WFQNRRAR K +Q E
Sbjct: 87 KKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQLER 146
Query: 191 DCEYLKRCCENLTEENRRL----QKEVQELRSLK 220
D + LK+ E+L +N L +K + E+ +LK
Sbjct: 147 DYDSLKKQFESLKSDNASLLAYNKKLLAEVMALK 180
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 128 (50.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/95 (35%), Positives = 47/95 (49%)
Query: 134 RLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCE 193
R S EQ LE F+ + +PRQV +WFQN+RAR K KQ E +
Sbjct: 35 RFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETEYN 94
Query: 194 YLKRCCENLTEENRRLQKE----VQELRSLKLSPQ 224
L++ +NL + L+KE V EL+ LK + Q
Sbjct: 95 ILRQNYDNLASQFESLKKEKQALVSELQRLKEATQ 129
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 125 (49.1 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 31/88 (35%), Positives = 46/88 (52%)
Query: 131 KKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEV 190
KK RL+ EQ LE++F+ + +PRQ+ +WFQNRRAR K KQ E
Sbjct: 115 KKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLER 174
Query: 191 DCEYLKRCCENLTEENRRLQKEVQELRS 218
D + LK+ + L +N L ++L +
Sbjct: 175 DYDSLKKQFDVLKSDNDSLLAHNKKLHA 202
>TAIR|locus:2041283 [details] [associations]
symbol:HB6 "homeobox protein 6" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=TAS] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009269 "response to desiccation"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009738 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009788
EMBL:AC006592 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2685900 EMBL:X67034 EMBL:AY060569 EMBL:AY063819
EMBL:AY094457 EMBL:AY122903 EMBL:AF104900 IPI:IPI00548532
PIR:E84612 PIR:S47136 RefSeq:NP_565536.1 UniGene:At.25257
ProteinModelPortal:P46668 SMR:P46668 STRING:P46668
EnsemblPlants:AT2G22430.1 GeneID:816775 KEGG:ath:AT2G22430
GeneFarm:3962 TAIR:At2g22430 eggNOG:NOG255500 InParanoid:P46668
OMA:ESDISVK PhylomeDB:P46668 Genevestigator:P46668
GermOnline:AT2G22430 Uniprot:P46668
Length = 311
Score = 123 (48.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/99 (36%), Positives = 51/99 (51%)
Query: 131 KKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEV 190
KK RLS Q LE+ F+ + +PRQV VWFQNRRAR K KQ E
Sbjct: 62 KKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEK 121
Query: 191 D-----CEY--LKRCCENLTEENRRLQKEVQELRSLKLS 222
D +Y L+ ++L +N L +E+ +L++ KL+
Sbjct: 122 DYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKT-KLN 159
>TAIR|locus:2168225 [details] [associations]
symbol:HB5 "homeobox protein 5" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009787
"regulation of abscisic acid mediated signaling pathway"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP;IDA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=TAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0042803
GO:GO:0009738 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB011479 GO:GO:0000976
HOGENOM:HOG000006025 EMBL:X67033 EMBL:AF325054 EMBL:AY074293
EMBL:AY091340 IPI:IPI00526581 PIR:S47135 RefSeq:NP_201334.1
UniGene:At.19698 UniGene:At.67842 ProteinModelPortal:P46667
SMR:P46667 STRING:P46667 EnsemblPlants:AT5G65310.1 GeneID:836656
KEGG:ath:AT5G65310 GeneFarm:3988 TAIR:At5g65310 eggNOG:NOG325574
InParanoid:P46667 OMA:PTSELAF PhylomeDB:P46667
ProtClustDB:CLSN2686460 Genevestigator:P46667 Uniprot:P46667
Length = 312
Score = 123 (48.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/99 (36%), Positives = 51/99 (51%)
Query: 131 KKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEV 190
KK RL EQ LE+ F+ + +PRQV +WFQNRRAR K KQ E
Sbjct: 72 KKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLER 131
Query: 191 DC-------EYLKRCCENLTEENRRLQKEVQELRSLKLS 222
D + LKR ++L +N L +++EL++ KL+
Sbjct: 132 DYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKA-KLN 169
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 110 (43.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 34/116 (29%), Positives = 52/116 (44%)
Query: 131 KKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEV 190
KK RL+++Q LE+ F + RQV VWFQN+RAR K + EV
Sbjct: 11 KKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKTQSLEV 70
Query: 191 DCEYLKRCCENLTEENRRLQKEVQ----ELRSLKLSPQLYMNMNPPTTLTMCPSCE 242
L+ E + +L+ +VQ EL+ + L+ N + P + SC+
Sbjct: 71 QHCTLQSKHEAALSDKAKLEHQVQFLQDELKRARNQLALFTNQDSPVDNSNLGSCD 126
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 118 (46.6 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 30/85 (35%), Positives = 41/85 (48%)
Query: 134 RLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCE 193
R S+EQ LE F+ + +PRQV +WFQN+RAR K KQ E +
Sbjct: 33 RFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEYN 92
Query: 194 YLKRCCENLTEENRRLQKEVQELRS 218
L+ NL + ++KE Q L S
Sbjct: 93 TLRANYNNLASQFEIMKKEKQSLVS 117
>TAIR|locus:2140055 [details] [associations]
symbol:HB16 "homeobox protein 16" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0048510 "regulation of
timing of transition from vegetative to reproductive phase"
evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0030308
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048510 GO:GO:0048573
EMBL:AL161596 GO:GO:0000976 EMBL:AL035708 KO:K09338
HOGENOM:HOG000006025 EMBL:AF076641 EMBL:AF370620 EMBL:AY054571
EMBL:AY128917 IPI:IPI00531709 PIR:G85474 PIR:T06112
RefSeq:NP_195716.1 UniGene:At.20863 ProteinModelPortal:Q940J1
SMR:Q940J1 PaxDb:Q940J1 PRIDE:Q940J1 EnsemblPlants:AT4G40060.1
GeneID:830169 KEGG:ath:AT4G40060 GeneFarm:3982 TAIR:At4g40060
eggNOG:NOG321520 InParanoid:Q940J1 OMA:CDSSAVL PhylomeDB:Q940J1
ProtClustDB:CLSN2685900 Genevestigator:Q940J1 Uniprot:Q940J1
Length = 294
Score = 119 (46.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 33/94 (35%), Positives = 46/94 (48%)
Query: 131 KKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEV 190
KK RL +Q LE+ F+ + +PRQV VWFQNRRAR K KQ E
Sbjct: 59 KKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEK 118
Query: 191 DCEYLKRCCENLTEENRRLQKE----VQELRSLK 220
D LK ++L L+++ +QE+ +K
Sbjct: 119 DYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIK 152
>TAIR|locus:2040520 [details] [associations]
symbol:HB22 "homeobox protein 22" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
Uniprot:Q4PSR7
Length = 185
Score = 111 (44.1 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 31/98 (31%), Positives = 50/98 (51%)
Query: 130 RKKLRLSKEQSLLLEETFKEH--------STXXXXXXXXXXXXXXXRPRQVEVWFQNRRA 181
+KK +++ EQ LE +F+E +PRQ+ VWFQNR+A
Sbjct: 70 KKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKA 129
Query: 182 RTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRSL 219
R K KQ E E L++ + ++ E LQ+E+ +L+S+
Sbjct: 130 RWKNKQLEHLYESLRQEFDIVSREKELLQEELIQLKSM 167
>TAIR|locus:2173669 [details] [associations]
symbol:HB53 "homeobox 53" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0048364 "root development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0006950
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG250192
HSSP:P01366 HOGENOM:HOG000034122 ProtClustDB:CLSN2683051
EMBL:AY683477 EMBL:AB018119 EMBL:BT024847 IPI:IPI00532925
RefSeq:NP_201471.1 UniGene:At.51263 ProteinModelPortal:Q9LVR0
SMR:Q9LVR0 PRIDE:Q9LVR0 EnsemblPlants:AT5G66700.1 GeneID:836803
KEGG:ath:AT5G66700 GeneFarm:3989 TAIR:At5g66700 InParanoid:Q9LVR0
OMA:ELAPETN PhylomeDB:Q9LVR0 Genevestigator:Q9LVR0
GermOnline:AT5G66700 Uniprot:Q9LVR0
Length = 228
Score = 110 (43.8 bits), Expect = 0.00029, P = 0.00029
Identities = 32/95 (33%), Positives = 46/95 (48%)
Query: 131 KKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEV 190
+K +L+ EQ +LE +F PRQV VWFQNRRAR K K+ E
Sbjct: 71 RKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEE 130
Query: 191 DCEYLKRCCENLTEENRRLQKEVQELRSLKLSPQL 225
+ LK +N+ +L+ ++ LKL+ QL
Sbjct: 131 EYAKLKNHHDNVVLGQCQLESQI-----LKLTEQL 160
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.128 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 287 225 0.00077 113 3 11 23 0.43 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 606 (64 KB)
Total size of DFA: 189 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.28u 0.07s 20.35t Elapsed: 00:00:00
Total cpu time: 20.28u 0.07s 20.35t Elapsed: 00:00:00
Start: Sat May 11 11:25:31 2013 End: Sat May 11 11:25:31 2013