Citrus Sinensis ID: 023113


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------
MGEKDDGLGLSLSLGCAARNEPSLRLNHMPLSSSQSMQNHHKRSPWTELFHSSDRNSDTRSFLRGIDVNQAPTVADCEEENGVSSPNSTVSSISGKRSEREPIGDETEAERASCSRGSDDEDGGAGDASRKKLRLSKEQSLLLEETFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRSLKLSPQLYMNMNPPTTLTMCPSCERVAVSSSSSSSSAAANGTTRLPIGPNHQRLTPVSPWAALPIHHRS
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHccccccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
***KDDGLG*******************************************************************************************************************************KEQSLLLEETFKEHSTLNP*****LAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLT**********************************************************************PVSPW*********
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MGEKDDGLGLSLSLGCAARNEPSLRLNHMPLSSSQSMQNHHKRSPWTELFHSSDRNSDTRSFLRGIDVNQAPTVADCEEENGVSSPNSTVSSISGKRSEREPIGDETEAERASCSRGSDDEDGGAGDASRKKLRLSKEQSLLLEETFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxPQLYMNMNPPTTLTMCPSCERVAVSSSSSSSSAAANGTTRLPIGPNHQRLTPVSPWAALPIHHRS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Homeobox-leucine zipper protein HAT3 Probable transcription factor.probableP46602
Homeobox-leucine zipper protein HOX1 Probable transcription repressor involved leaf development. Binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. May act as a regulatory switch to specify provascular cell fate.probableQ7XC54

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1B72, chain A
Confidence level:confident
Coverage over the Query: 88-96,131-189
View the alignment between query and template
View the model in PyMOL
Template: 2L9R, chain A
Confidence level:confident
Coverage over the Query: 53-102
View the alignment between query and template
View the model in PyMOL
Template: 1HJB, chain A
Confidence level:probable
Coverage over the Query: 180-221
View the alignment between query and template
View the model in PyMOL