BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023114
(287 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2GFH|A Chain A, Crystal Structure Of A N-acetylneuraminic Acid Phosphatase
(nanp) From Mus Musculus At 1.90 A Resolution
Length = 260
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 10/208 (4%)
Query: 66 RSLYGDITHKALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEIL-NRYRRAYEQPW 124
R+++ D+ + L+D AG + M ++ + + KY EAEI+ ++ + +
Sbjct: 19 RAVFFDLDNT--LIDTAGA---SRRGMLEVIKLLQSKYHYK-EEAEIICDKVQVKLSKEC 72
Query: 125 GGSRLRYVNDGR-PFWQFIVSSSTGCSDSQYF-EELYNYYTTEKAWHLCDPEAEKVFKAI 182
+ D R W+ + + G +D++ EE Y + + + H+ + K
Sbjct: 73 FHPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTE 132
Query: 183 RKAGVKLAVVSNFDTRL-RPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVK 241
+ V+L +++N D + R + A C +FD KP P+IF CDLLGV+
Sbjct: 133 LRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQ 192
Query: 242 PEDAVHVGDDRRNDVWGARDAGCDAWLW 269
P D V VGD D+ G +AG A +W
Sbjct: 193 PGDCVMVGDTLETDIQGGLNAGLKATVW 220
>pdb|2W4M|A Chain A, The Crystal Structure Of Human N-Acetylneuraminic Acid
Phosphatase, Nanp
Length = 270
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 142 IVSSSTGCSDSQYFEELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRL-R 200
I + G ++ + EE Y + + + H+ E K + V+L +++N D + R
Sbjct: 102 IQETKGGAANRKLAEECYFLWKSTRLQHMTLAEDVKAMLTELRKEVRLLLLTNGDRQTQR 161
Query: 201 PVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGAR 260
+ A C +FD KP P+IF C+LLGV+P D V VGD D+ G
Sbjct: 162 EKIEACACQSYFDAVVVGGEQREEKPAPSIFYYCCNLLGVQPGDCVMVGDTLETDIQGGL 221
Query: 261 DAGCDAWLW 269
+AG A +W
Sbjct: 222 NAGLKATVW 230
>pdb|2HSZ|A Chain A, Crystal Structure Of A Predicted Phosphoglycolate
Phosphatase (hs_0176) From Haemophilus Somnus 129pt At
1.90 A Resolution
pdb|2HSZ|B Chain B, Crystal Structure Of A Predicted Phosphoglycolate
Phosphatase (hs_0176) From Haemophilus Somnus 129pt At
1.90 A Resolution
Length = 243
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 153 QYFEELYNYYTTEKAWHLCD-----PEAEKVFKAIRKAGVKLAVVSNFDTR-LRPVLRAL 206
+YF+ + +Y E +LC+ P ++ +A++ G LAVV+N T+ ++P+L A
Sbjct: 95 KYFKRQFGFYYGE---NLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAF 151
Query: 207 NCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGC 264
DH F KP+P F C G+ P+ + VG D +ND++ A AGC
Sbjct: 152 GIDHLFSEXLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVG-DSQNDIFAAHSAGC 208
>pdb|3K1Z|A Chain A, Crystal Structure Of Human Haloacid Dehalogenase-like
Hydrolase Domain Containing 3 (hdhd3)
Length = 263
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 80 DAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAY---EQPWGGSRLRYVNDGR 136
D TLL P+ + Y +G+ + + +R+AY + L + R
Sbjct: 7 DVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSR 66
Query: 137 PFWQFIVSSS---TGCSDSQYF----EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKL 189
+W +V + G D+Q E+LY ++ W + D AE + R G++L
Sbjct: 67 QWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLD-GAEDTLRECRTRGLRL 125
Query: 190 AVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVG 249
AV+SNFD RL +L L FD KP+P IF +A L +P A HVG
Sbjct: 126 AVISNFDRRLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHXEPVVAAHVG 185
Query: 250 DDRRNDVWGARDAGCDAWL 268
D+ D G R G ++L
Sbjct: 186 DNYLCDYQGPRAVGXHSFL 204
>pdb|2HOQ|A Chain A, Crystal Structure Of The Probable Haloacid Dehalogenase
(Ph1655) From Pyrococcus Horikoshii Ot3
Length = 241
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 161 YYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVS--NFDTRLRPVLRALNCDHWFDXXXXX 218
Y+ T+ A+ P A KV +++ G +L +++ N + +LR L D +F+
Sbjct: 85 YHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILR-LELDDFFEHVIIS 143
Query: 219 XXXXXXKPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWLWGSDVHSFKE 278
KP+P IF KA VKPE+A+ VGD +D++GA+ G + HS +E
Sbjct: 144 DFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERE 203
Query: 279 VAQR 282
+ R
Sbjct: 204 LEYR 207
>pdb|2YY6|A Chain A, Crystal Structure Of The Phosphoglycolate Phosphatase From
Aquifex Aeolicus Vf5
pdb|2YY6|B Chain B, Crystal Structure Of The Phosphoglycolate Phosphatase From
Aquifex Aeolicus Vf5
Length = 213
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 173 PEAEKVFKAIRKAGVKLAVVSN-FDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIF 231
PE +A++ G KLAVVSN + + +L LN +FD KP+PT
Sbjct: 84 PEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPV 143
Query: 232 LKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDA--WLWG 270
LK ++LG +PE A+ VG D D+ + AG LWG
Sbjct: 144 LKTLEILGEEPEKALIVG-DTDADIEAGKRAGTKTALALWG 183
>pdb|2NYV|A Chain A, X-Ray Crystal Structure Of A Phosphoglycolate Phosphatase
From Aquifex Aeolicus
Length = 222
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 173 PEAEKVFKAIRKAGVKLAVVSN-FDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIF 231
PE +A++ G KLAVVSN + + +L LN +FD KP+PT
Sbjct: 86 PEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPV 145
Query: 232 LKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDA--WLWG 270
LK ++LG +PE A+ VG D D+ + AG LWG
Sbjct: 146 LKTLEILGEEPEKALIVG-DTDADIEAGKRAGTKTALALWG 185
>pdb|2NO4|A Chain A, Crystal Structure Analysis Of A Dehalogenase
pdb|2NO4|B Chain B, Crystal Structure Analysis Of A Dehalogenase
Length = 240
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 60 DYEDYRRSLYGDITHKALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRA 119
DY+D L + +A + DA GTLL + + E+G A +EA + +R
Sbjct: 2 DYKDDDDKLVDSL--RACVFDAYGTLLDVHSAVMRNADEVG-----ASAEALSMLWRQRQ 54
Query: 120 YEQPWGGSRLRYVNDGRPFWQFIVSSSTGCSDSQYFEE-------LYNYYTTEKAWHLCD 172
E W + + D FWQ + T + + E+ L + Y A+
Sbjct: 55 LEYSWTRTLMHQYAD---FWQLTDEALTFALRTYHLEDRKGLKDRLMSAYKELSAY---- 107
Query: 173 PEAEKVFKAIRKAGVKLAVVSN-FDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIF 231
P+A + + ++ AG +A++SN D L+ L+A D D KP+P I+
Sbjct: 108 PDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIY 167
Query: 232 LKACDLLGVKPEDAVHVGDD 251
ACD LGV P + V +
Sbjct: 168 QFACDRLGVNPNEVCFVSSN 187
>pdb|2NO5|A Chain A, Crystal Structure Analysis Of A Dehalogenase With
Intermediate Complex
pdb|2NO5|B Chain B, Crystal Structure Analysis Of A Dehalogenase With
Intermediate Complex
Length = 240
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 22/200 (11%)
Query: 60 DYEDYRRSLYGDITHKALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRA 119
DY+D L + +A + A GTLL + + E+G A +EA + +R
Sbjct: 2 DYKDDDDKLVDSL--RACVFXAYGTLLDVHSAVMRNADEVG-----ASAEALSMLWRQRQ 54
Query: 120 YEQPWGGSRLRYVNDGRPFWQFIVSSSTGCSDSQYFEE-------LYNYYTTEKAWHLCD 172
E W + + D FWQ + T + + E+ L + Y A+
Sbjct: 55 LEYSWTRTLMHQYAD---FWQLTDEALTFALRTYHLEDRKGLKDRLMSAYKELSAY---- 107
Query: 173 PEAEKVFKAIRKAGVKLAVVSN-FDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIF 231
P+A + + ++ AG +A++SN D L+ L+A D D KP+P I+
Sbjct: 108 PDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIY 167
Query: 232 LKACDLLGVKPEDAVHVGDD 251
ACD LGV P + V +
Sbjct: 168 QFACDRLGVNPNEVCFVSSN 187
>pdb|3KZX|A Chain A, Crystal Structure Of A Had-Superfamily Hydrolase From
Ehrlichia Chaffeensis At 1.9a Resolution
Length = 231
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 175 AEKVFKAIRKAGVKLAVVSNFD-TRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLK 233
A ++ +++ + +A+VSN + RLR + N H+FD KP+P L
Sbjct: 108 AIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLA 167
Query: 234 ACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWLWGS-----DVHSFKE 278
A + ++P V D +D+ A +AGC +GS D+ SFK
Sbjct: 168 ALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNIIKDILSFKN 217
>pdb|2ZG6|A Chain A, Crystal Structure Of Hypothetical Protein; Probable 2-
Haloalkanoic Acid Dehalogenase From Sulfolobus Tokodaii
pdb|2ZG6|B Chain B, Crystal Structure Of Hypothetical Protein; Probable 2-
Haloalkanoic Acid Dehalogenase From Sulfolobus Tokodaii
Length = 220
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 179 FKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLL 238
+ ++ G KLA+VSN R++ +L + +FD KPNP IF A +
Sbjct: 104 LEGLKSNGYKLALVSNASPRVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKV 163
Query: 239 GVKPEDAVHVGDDRRNDVWGARDAGCDAWLW 269
G AVHVGD D GA+ + D L
Sbjct: 164 GYP---AVHVGDIYELDYIGAKRSYVDPILL 191
>pdb|3D6J|A Chain A, Crystal Structure Of Putative Haloacid Dehalogenase-Like
Hydrolase From Bacteroides Fragilis
Length = 225
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 147 TGCSDSQYFEELYNYYTTE-----KAWHLCDPEAEKVFKAIRKAGVKLAVVSN-FDTRLR 200
TG +D+ E Y+ E A + P+ ++K G+++ ++S + R+
Sbjct: 61 TGITDADQLESFRQEYSKEADIYXNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRIL 120
Query: 201 PVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGD 250
LR D WFD KP+P L A D L PE+ +++GD
Sbjct: 121 SFLRNHXPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGD 170
>pdb|4FFD|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or48
Length = 234
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 70/178 (39%), Gaps = 48/178 (26%)
Query: 92 MAQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVNDGRPFWQFIVSSSTGCSD 151
+ ++ R++ EKYG Y E FW+ + S
Sbjct: 68 LEEVMRKLAEKYGFKYPEN---------------------------FWEISLRMS----- 95
Query: 152 SQYFEELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDT-RLRPVLRALNCDH 210
Q + ELY PE +V K++ K + ++++ DT + L AL
Sbjct: 96 -QRYGELY-------------PEVVEVLKSL-KGKYHVGMITDSDTEQAMAFLDALGIKD 140
Query: 211 WFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWL 268
FD KP+P IF A GVK E+AV+VGD+ D G+++ G + L
Sbjct: 141 LFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSIL 198
>pdb|3U26|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or48
Length = 234
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 69/178 (38%), Gaps = 48/178 (26%)
Query: 92 MAQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVNDGRPFWQFIVSSSTGCSD 151
+ ++ R++ EKYG Y E FW+ + S
Sbjct: 68 LEEVXRKLAEKYGFKYPEN---------------------------FWEISLRXS----- 95
Query: 152 SQYFEELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDT-RLRPVLRALNCDH 210
Q + ELY PE +V K++ K + +++ DT + L AL
Sbjct: 96 -QRYGELY-------------PEVVEVLKSL-KGKYHVGXITDSDTEQAXAFLDALGIKD 140
Query: 211 WFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWL 268
FD KP+P IF A GVK E+AV+VGD+ D G+++ G + L
Sbjct: 141 LFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGXTSIL 198
>pdb|1X42|A Chain A, Crystal Structure Of A Haloacid Dehalogenase Family
Protein (Ph0459) From Pyrococcus Horikoshii Ot3
Length = 232
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 173 PEAEKVFKAIRKAGVKLAVVSNFDTR-LRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIF 231
PE +V K++ K + +++ DT L L AL FD KP+P IF
Sbjct: 103 PEVVEVLKSL-KGKYHVGXITDSDTEYLXAHLDALGIKDLFDSITTSEEAGFFKPHPRIF 161
Query: 232 LKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWL 268
A GVK E+AV+VGD+ D G+++ G + L
Sbjct: 162 ELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGXTSIL 198
>pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From
Thermotoga Maritima
Length = 216
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 29/209 (13%)
Query: 75 KALLVDAAGTLLVPSQPM-AQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVN 133
+A++ D G +L ++P+ + YR + E YG Y+E + +RR P
Sbjct: 2 EAVIFDXDG-VLXDTEPLYFEAYRRVAESYGKPYTE----DLHRRIXGVPE--------R 48
Query: 134 DGRPFWQFIVSSSTGCSDSQYFEELYNYYTTEKAWHLCD-----PEAEKVFKAIRKAGVK 188
+G P I+ + DS E EK + P + + ++ +K
Sbjct: 49 EGLP----ILXEALEIKDS--LENFKKRVHEEKKRVFSELLKENPGVREALEFVKSKRIK 102
Query: 189 LAVVSNFDTR-LRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVH 247
LA+ ++ R LR L+ + +FD KP+P I+L + L V PE V
Sbjct: 103 LALATSTPQREALERLRRLDLEKYFDVXVFGDQVKNGKPDPEIYLLVLERLNVVPEKVV- 161
Query: 248 VGDDRRNDVWGARDAGCDAWLWGSDVHSF 276
V +D ++ V A+ AG + ++G VHS
Sbjct: 162 VFEDSKSGVEAAKSAGIE-RIYGV-VHSL 188
>pdb|3HLT|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like
Hydrolase Domain Containing 2 (Hdhd2)
pdb|3HLT|C Chain C, The Crystal Structure Of Human Haloacid Dehalogenase-Like
Hydrolase Domain Containing 2 (Hdhd2)
Length = 266
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 225 KPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAG 263
KP T FL+A G +PE+AV +GDD R+DV GA+D G
Sbjct: 179 KPEKTFFLEALRGTGCEPEEAVMIGDDCRDDVGGAQDVG 217
>pdb|2OM6|A Chain A, Hypothetical Protein (probable Phosphoserine Phosph
(ph0253) From Pyrococcus Horikoshii Ot3
pdb|2OM6|B Chain B, Hypothetical Protein (probable Phosphoserine Phosph
(ph0253) From Pyrococcus Horikoshii Ot3
Length = 235
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 182 IRKAGVKLAVVSNFD----TRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDL 237
+++ G+K AV+ N + R +L + D KP F K +
Sbjct: 111 VKERGLKTAVIGNVXFWPGSYTRLLLERFGLXEFIDKTFFADEVLSYKPRKEXFEKVLNS 170
Query: 238 LGVKPEDAVHVGDDRRNDVWGARDAG 263
VKPE+++H+GD D GAR G
Sbjct: 171 FEVKPEESLHIGDTYAEDYQGARKVG 196
>pdb|3FM9|A Chain A, Analysis Of The Structural Determinants Underlying
Discrimination Between Substrate And Solvent In Beta-
Phosphoglucomutase Catalysis
Length = 221
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 25/198 (12%)
Query: 75 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVND 134
KA+L D G + P++ + ++ + E+ G+ + R+ EQ G SR
Sbjct: 3 KAVLFDLDGVITDPAEYHFRAWKALAEEIGINGVD-------RQFNEQLKGVSR------ 49
Query: 135 GRPFWQFIVSSSTGCSDSQYFEELY-----NYYTTEKAWHLCD--PEAEKVFKAIRKAGV 187
Q I+ + ++ F+EL NY + D P ++ K +R +
Sbjct: 50 -EDSLQKILDLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKI 108
Query: 188 KLAVVSNFDTRLRP-VLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAV 246
K+A+ S ++ P +L +N +FD KP P IF+ A +GV P +++
Sbjct: 109 KIALASA--SKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESI 166
Query: 247 HVGDDRRNDVWGARDAGC 264
+ +D + + +D+G
Sbjct: 167 GL-EDSQAGIQAIKDSGA 183
>pdb|3E58|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From
Streptococcus Thermophilus
pdb|3E58|B Chain B, Crystal Structure Of Putative Beta-Phosphoglucomutase From
Streptococcus Thermophilus
Length = 214
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 17/141 (12%)
Query: 136 RPFWQFIVSSSTGCSDSQYFEELYNYYTTEKAW---HLCDPEAEKVFKAIRKAGVKLAVV 192
+ W+ I+ D +E YN Y L P+ KV ++ G+++ +
Sbjct: 52 KQVWENILRDEYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLA 111
Query: 193 SNFDTRLRPVLRALNCDH---WFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVG 249
S+ + + RAL + +FD KPNP I+L A L V+ A+ +
Sbjct: 112 SS--SVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIE 169
Query: 250 DDRRN---------DVWGARD 261
D + +VW RD
Sbjct: 170 DSEKGIAAGVAADVEVWAIRD 190
>pdb|4G9B|A Chain A, Crystal Structure Of Beta-Phosphoglucomutase Homolog From
Escherichia Coli, Target Efi-501172, With Bound Mg, Open
Lid
Length = 243
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 46/120 (38%), Gaps = 5/120 (4%)
Query: 158 LYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXX 217
LY + E + P + +R + + + S +L AL +F
Sbjct: 83 LYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLAS-VSLNAPTILAALELREFFTFCAD 141
Query: 218 XXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGDDRRN----DVWGARDAGCDAWLWGSDV 273
KP+P IFL AC LGV P+ + + D + + G R G A L G+ +
Sbjct: 142 ASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQL 201
>pdb|2HO4|A Chain A, Crystal Structure Of Protein From Mouse Mm.236127
pdb|2HO4|B Chain B, Crystal Structure Of Protein From Mouse Mm.236127
Length = 259
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 225 KPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAG 263
KP T FL+A PE+AV +GDD R+DV GA++ G
Sbjct: 179 KPEKTFFLEALRDADCAPEEAVXIGDDCRDDVDGAQNIG 217
>pdb|3IB6|A Chain A, Crystal Structure Of An Uncharacterized Protein From
Listeria Monocytogenes Serotype 4b
pdb|3IB6|B Chain B, Crystal Structure Of An Uncharacterized Protein From
Listeria Monocytogenes Serotype 4b
pdb|3IB6|C Chain C, Crystal Structure Of An Uncharacterized Protein From
Listeria Monocytogenes Serotype 4b
pdb|3IB6|D Chain D, Crystal Structure Of An Uncharacterized Protein From
Listeria Monocytogenes Serotype 4b
Length = 189
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 175 AEKVFKAIRKAGVKLAVVSNFDTR----LRPVLRALNCDHWFDXXXXXXXX----XXXKP 226
A++ + +++ G K A++SN T ++ VL +FD KP
Sbjct: 39 AKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKP 98
Query: 227 NPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDA-WLWGSDV 273
+ TIF + L + +AV VG+ +D+ GA AG A WL +V
Sbjct: 99 DKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEV 146
>pdb|2HI0|A Chain A, Crystal Structure Of Putative Phosphoglycolate Phosphatase
(Yp_619066.1) From Lactobacillus Delbrueckii Subsp.
Bulgaricus Atcc Baa-365 At 1.51 A Resolution
pdb|2HI0|B Chain B, Crystal Structure Of Putative Phosphoglycolate Phosphatase
(Yp_619066.1) From Lactobacillus Delbrueckii Subsp.
Bulgaricus Atcc Baa-365 At 1.51 A Resolution
Length = 240
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 180 KAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLG 239
K +R+ GVKLAVVSN VL FD KP P + +LG
Sbjct: 120 KNLRQKGVKLAVVSNKPNEAVQVLVEELFPGSFDFALGEKSGIRRKPAPDXTSECVKVLG 179
Query: 240 VKPEDAVHVGDDRRNDVWGARDAGCD--AWLWG 270
V + V++GD D+ AR++ D A WG
Sbjct: 180 VPRDKCVYIGDSEI-DIQTARNSEXDEIAVNWG 211
>pdb|2X4D|A Chain A, Crystal Structure Of Human Phospholysine Phosphohistidine
Inorganic Pyrophosphate Phosphatase Lhpp
pdb|2X4D|B Chain B, Crystal Structure Of Human Phospholysine Phosphohistidine
Inorganic Pyrophosphate Phosphatase Lhpp
Length = 271
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 8/137 (5%)
Query: 132 VNDG-RPFWQFIVSSSTGCSDSQYFEELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLA 190
++DG R + I +S+ C E ++Y A+ + + V ++ K G A
Sbjct: 103 IHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVLISLGK-GRYYA 161
Query: 191 VVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGD 250
S + P ++AL + KP+P F A +GV+ AV +GD
Sbjct: 162 ATSGLMLDVGPYMKAL------EYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGD 215
Query: 251 DRRNDVWGARDAGCDAW 267
D DV GA+ G A
Sbjct: 216 DIVGDVGGAQRCGMRAL 232
>pdb|1O03|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An
Enzyme Catalyzed Phosphoryl Transfer Reaction Observed
On Cocrystallization With Glucose 6-Phosphate
pdb|1O08|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An
Enzyme Catalyzed Phosphoryl Transfer Reaction Observed
On Cocrystallization With Glucose 1-Phosphate
pdb|1Z4N|A Chain A, Structure Of Beta-phosphoglucomutase With Inhibitor Bound
Alpha-galactose 1-phosphate Cocrystallized With Fluoride
pdb|1Z4N|B Chain B, Structure Of Beta-phosphoglucomutase With Inhibitor Bound
Alpha-galactose 1-phosphate Cocrystallized With Fluoride
pdb|1Z4O|A Chain A, Structure Of Beta-Phosphoglucomutase With Inhibitor Bound
Alpha-Galactose 1-Phosphate
pdb|1Z4O|B Chain B, Structure Of Beta-Phosphoglucomutase With Inhibitor Bound
Alpha-Galactose 1-Phosphate
pdb|1ZOL|A Chain A, Native Beta-Pgm
pdb|2WF5|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phospahte And Trifluoromagnesate
pdb|2WHE|A Chain A, Structure Of Native Beta-Phosphoglucomutase In An Open
Conformation Without Bound Ligands.
pdb|2WF7|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phosphonate And Aluminium Tetrafluoride
pdb|2WF6|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phospahte And Aluminium Tetrafluoride
pdb|2WF8|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phosphate, Glucose-1-Phosphate And Beryllium
Trifluoride
pdb|2WF9|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phosphate, And Beryllium Trifluoride, Crystal
Form 2
pdb|2WFA|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Beryllium Trifluoride, In An Open Conformation
Length = 221
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 173 PEAEKVFKAIRKAGVKLAVVSNFDTRLRP-VLRALNCDHWFDXXXXXXXXXXXKPNPTIF 231
P ++ K +R +K+A+ S ++ P +L +N +FD KP P IF
Sbjct: 94 PGILQLLKDLRSNKIKIALASA--SKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIF 151
Query: 232 LKACDLLGVKPEDAVHVGDDRRNDVWGARDAGC 264
+ A +GV P +++ + +D + + +D+G
Sbjct: 152 IAAAHAVGVAPSESIGL-EDSQAGIQAIKDSGA 183
>pdb|1LVH|A Chain A, The Structure Of Phosphorylated Beta-phosphoglucomutase
From Lactoccocus Lactis To 2.3 Angstrom Resolution
pdb|1LVH|B Chain B, The Structure Of Phosphorylated Beta-phosphoglucomutase
From Lactoccocus Lactis To 2.3 Angstrom Resolution
Length = 221
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 173 PEAEKVFKAIRKAGVKLAVVSNFDTRLRP-VLRALNCDHWFDXXXXXXXXXXXKPNPTIF 231
P ++ K +R +K+A+ S ++ P +L +N +FD KP P IF
Sbjct: 94 PGILQLLKDLRSNKIKIALASA--SKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIF 151
Query: 232 LKACDLLGVKPEDAVHVGDDRRNDVWGARDAGC 264
+ A +GV P +++ + +D + + +D+G
Sbjct: 152 IAAAHAVGVAPSESIGL-EDSQAGIQAIKDSGA 183
>pdb|3SMV|A Chain A, X-Ray Crystal Structure Of L-Azetidine-2-Carboxylate
Hydrolase
Length = 240
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 11/200 (5%)
Query: 75 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRY-RRAYEQPWGGSRLRYVN 133
KAL D GTL+ + + + ++ G ++ E+L + R Q Y +
Sbjct: 7 KALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQD 66
Query: 134 DGRPFWQFIVSSSTGCSDSQYFEELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVS 193
R + I D+ EE + T+ K W P+ + + ++K KL ++S
Sbjct: 67 ILRAVYDRIAKEWGLEPDAAEREE---FGTSVKNWPAF-PDTVEALQYLKKH-YKLVILS 121
Query: 194 NFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLL---GVKPEDAVHVGD 250
N D R L FD KPNP F D L G++ +D +H +
Sbjct: 122 NID-RNEFKLSNAKLGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDILHTAE 180
Query: 251 DRRNDVWGARDAG-CDAWLW 269
+D A DAG AW++
Sbjct: 181 SLYHDHIPANDAGLVSAWIY 200
>pdb|3VAY|A Chain A, Crystal Structure Of 2-Haloacid Dehalogenase From
Pseudomonas Syringae Pv. Tomato Dc3000
pdb|3VAY|B Chain B, Crystal Structure Of 2-Haloacid Dehalogenase From
Pseudomonas Syringae Pv. Tomato Dc3000
Length = 230
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 173 PEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFL 232
PE + + + K L V++N + +R L +F KP+P FL
Sbjct: 108 PEVQPTLEILAKT-FTLGVITNGNADVR----RLGLADYFAFALCAEDLGIGKPDPAPFL 162
Query: 233 KACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDA 266
+A V AVHVGD +D+ GA+ AG A
Sbjct: 163 EALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRA 196
>pdb|3UMC|A Chain A, Crystal Structure Of The L-2-Haloacid Dehalogenase Pa0810
pdb|3UMC|B Chain B, Crystal Structure Of The L-2-Haloacid Dehalogenase Pa0810
pdb|3UMC|C Chain C, Crystal Structure Of The L-2-Haloacid Dehalogenase Pa0810
pdb|3UMC|D Chain D, Crystal Structure Of The L-2-Haloacid Dehalogenase Pa0810
Length = 254
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 75 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVND 134
+A+L D GTL+ + + ++ + + G E+ +R+R+ Y+ R+R +
Sbjct: 23 RAILFDVFGTLVDWRSSLIEQFQALERELGGTLPCVELTDRWRQQYKP--AXDRVR---N 77
Query: 135 GRPFWQFI----------VSSSTGCS-DSQYFEELYNYYTTEKAWHLCDPEAEKVFKAIR 183
G+ WQ + ++ G + D + + ++ + W P+ A+
Sbjct: 78 GQAPWQHLDQLHRQSLEALAGEFGLALDEALLQRITGFWHRLRPW----PDTLAGXHAL- 132
Query: 184 KAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPE 243
KA LA +SN +T L + A + +D KP+P ++L AC LL + P+
Sbjct: 133 KADYWLAALSNGNTALX-LDVARHAGLPWDXLLCADLFGHYKPDPQVYLGACRLLDLPPQ 191
Query: 244 D 244
+
Sbjct: 192 E 192
>pdb|3CNH|A Chain A, Crystal Structure Of Predicted Hydrolase Of Haloacid
Dehalogenase-Like Superfamily (Np_295428.1) From
Deinococcus Radiodurans At 1.66 A Resolution
pdb|3CNH|B Chain B, Crystal Structure Of Predicted Hydrolase Of Haloacid
Dehalogenase-Like Superfamily (Np_295428.1) From
Deinococcus Radiodurans At 1.66 A Resolution
Length = 200
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 225 KPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWLWGSDVHSFKEVAQRIG 284
KPNP + L V+PE+AV V DDR +V AR G A + D +E +G
Sbjct: 141 KPNPAXYRLGLTLAQVRPEEAVXV-DDRLQNVQAARAVGXHA-VQCVDAAQLREELAALG 198
Query: 285 VK 286
V+
Sbjct: 199 VR 200
>pdb|1YDF|A Chain A, Crystal Structure Of A Had-like Phosphatase From
Streptococcus Pneumoniae
Length = 257
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 225 KPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWLWGSDVHSFKEVA 280
KPN I KA + LG++ E+ + VGD+ D+ D G L + +EVA
Sbjct: 181 KPNAIIMDKAVEHLGLEREELIMVGDNYLTDIRAGIDNGIPTLLVTTGFTKAEEVA 236
>pdb|1CQZ|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CQZ|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CR6|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1CR6|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1EK1|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK1|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK2|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
pdb|1EK2|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
Length = 554
Score = 35.0 bits (79), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 181 AIRKAGVKLAVVSNF---DTRLRPVLRALNCD--HWFDXXXXXXXXXXXKPNPTIFLKAC 235
A++K G +V+N D R L + C+ FD KP P I+
Sbjct: 111 ALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLL 170
Query: 236 DLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWLWGSDVHSFKEVAQRIGVK 286
D L KP + V + DD +++ ARD G L + + +E+ + G +
Sbjct: 171 DTLKAKPNEVVFL-DDFGSNLKPARDMGMVTILVHNTASALRELEKVTGTQ 220
>pdb|3SD7|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Putative
Phosphatase From Clostridium Difficile
Length = 240
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 176 EKVFKAIRKAGVKLAVVSNFDTRL-RPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKA 234
+++ + + K G L V ++ T +LR + D +F +
Sbjct: 116 KEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYV 175
Query: 235 CDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAW--LWGSDVHSFKEVAQ 281
DL VK +D V + DR+ D+ GA+ G D+ L+G SF+E+++
Sbjct: 176 LDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYG--YGSFEEISE 222
>pdb|2HDO|A Chain A, Crystal Structure Of Putative Phosphoglycolate Phosphatase
(Np_784602.1) From Lactobacillus Plantarum At 1.50 A
Resolution
Length = 209
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 25/216 (11%)
Query: 73 THKALLVDAAGTLLVPSQPM-AQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRY 131
T++AL D GTL SQP + RE+ YG +S A+ + A EQ + L
Sbjct: 3 TYQALXFDIDGTL-TNSQPAYTTVXREVLATYGKPFSPAQAQKTFPXAAEQ--AXTELG- 58
Query: 132 VNDGRPFWQFIVSSSTGCSDSQYFEELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAV 191
I +S +QY + ++Y + + P +F+ + + ++L +
Sbjct: 59 ----------IAASEFDHFQAQYEDVXASHYDQIELY----PGITSLFEQL-PSELRLGI 103
Query: 192 V-SNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGD 250
V S L R+ KP+P L A + + V P++A+ +G
Sbjct: 104 VTSQRRNELESGXRSYPFXXRXAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIG- 162
Query: 251 DRRNDVWGARDAGCDAWL--WGSDVHS-FKEVAQRI 283
D +D A+ A D L WG D ++ ++VA R
Sbjct: 163 DSVSDEQTAQAANVDFGLAVWGXDPNADHQKVAHRF 198
>pdb|3EPR|A Chain A, Crystal Structure Of Putative Had Superfamily Hydrolase
From Streptococcus Agalactiae
Length = 264
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 225 KPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWLWGSDVHSFKEV 279
KPN I KA ++L + AV VGD+ D+ + D L + + +EV
Sbjct: 182 KPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEV 236
>pdb|4GIB|A Chain A, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase
(Pgmb) From Clostridium Difficile
pdb|4GIB|B Chain B, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase
(Pgmb) From Clostridium Difficile
Length = 250
Score = 34.3 bits (77), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 156 EELYNYYTT---EKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWF 212
EE NYY + E + P E + ++ +K+ + S + VL L F
Sbjct: 99 EEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASKNAIN-VLNHLGISDKF 157
Query: 213 DXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGD 250
D KP+P IFL + L V P++ + + D
Sbjct: 158 DFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIGIED 195
>pdb|4EX6|A Chain A, Crystal Structure Of The Alnumycin P Phosphatase Alnb
pdb|4EX7|A Chain A, Crystal Structure Of The Alnumycin P Phosphatase In
Complex With Free Phosphate
Length = 237
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 62/177 (35%), Gaps = 12/177 (6%)
Query: 75 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVND 134
+ +++D GTL +A I E+ G A S IL+ R G V D
Sbjct: 20 RGVILDLDGTLADTPAAIATITAEVLAAMGTAVSRGAILSTVGRPLPASLAGLLGVPVED 79
Query: 135 GRPFWQFIVSSSTGCSDSQYFEELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAV-VS 193
R V+ +T + + + + L P + + AG +LA+ S
Sbjct: 80 PR------VAEAT-----EEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATS 128
Query: 194 NFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGD 250
+ R + D KP+P + L LG+ PE V +GD
Sbjct: 129 KVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGD 185
>pdb|2FDR|A Chain A, Crystal Structure Of Conserved Haloacid Dehalogenase-like
Protein Of Unknown Function Atu0790 From Agrobacterium
Tumefaciens Str. C58
Length = 229
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 225 KPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWLWGSDVHSFKEVAQRI 283
KP P IFL GV P D V V +D + + GAR AG + H++ A R+
Sbjct: 143 KPKPDIFLHGAAQFGVSP-DRVVVVEDSVHGIHGARAAGXRVIGFTGASHTYPSHADRL 200
>pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase
pdb|1VJ5|A Chain A, Human Soluble Epoxide Hydrolase- N-Cyclohexyl-N'-(4-
Iodophenyl)urea Complex
pdb|1ZD2|P Chain P, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Ethanoic Acid Complex
pdb|1ZD3|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Butyric Acid Complex
pdb|1ZD4|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Hexanoic Acid Complex
pdb|1ZD5|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Heptanoic Acid Complex
pdb|3I1Y|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3I28|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3KOO|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3OTQ|A Chain A, Soluble Epoxide Hydrolase In Complex With Pyrazole
Antagonist
pdb|4HAI|A Chain A, Crystal Structure Of Human Soluble Epoxide Hydrolase
Complexed With N-
Cycloheptyl-1-(mesitylsulfonyl)piperidine-4-carboxamide
Length = 555
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 182 IRKAGVKLAVVSN--FDTRL-RPVLRALNCD--HWFDXXXXXXXXXXXKPNPTIFLKACD 236
+RK G A+++N D R R L L C+ FD KP P I+ D
Sbjct: 112 LRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLD 171
Query: 237 LLGVKPEDAVHVGDDRRNDVWGARDAGCDAWLWGSDVHSFKEVAQRIGVKV 287
L P + V + DD ++ ARD G L + KE+ + G+++
Sbjct: 172 TLKASPSEVVFL-DDIGANLKPARDLGMVTILVQDTDTALKELEKVTGIQL 221
>pdb|2C4N|A Chain A, Nagd From E.Coli K-12 Strain
Length = 250
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 225 KPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWLWGSDVHSFKEV 279
KP+P I A + + E+ V VGD+ R D+ AG + L S V S ++
Sbjct: 176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDI 230
>pdb|1YS9|A Chain A, Crystal Sructure Of Phosphatase Spy1043 From Streptococcus
Pyogenes
Length = 254
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 225 KPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVW 257
KPN I K+ ++LG++ +AV VGD+ D+
Sbjct: 181 KPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDIM 213
>pdb|1TE5|A Chain A, The 2.0 Angstrom Crystal Structure Of Predicted Glutamine
Amidotransferase From Pseudomonas Aeruginosa Pa01
pdb|1TE5|B Chain B, The 2.0 Angstrom Crystal Structure Of Predicted Glutamine
Amidotransferase From Pseudomonas Aeruginosa Pa01
Length = 257
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 12/74 (16%)
Query: 53 LGVFGLKDYEDYRRSL---YGDITHKALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSE 109
+G GL + + R L Y H L D QP YR +GE A +
Sbjct: 83 VGKVGLSNTHPFIRELGGRYWTFAHNGQLADF--------QPKPGFYRPVGETDSEA-AF 133
Query: 110 AEILNRYRRAYEQP 123
++LNR RRA+ +P
Sbjct: 134 CDLLNRVRRAFPEP 147
>pdb|4HG2|A Chain A, The Structure Of A Putative Type Ii Methyltransferase From
Anaeromyxobacter Dehalogenans.
pdb|4HG2|B Chain B, The Structure Of A Putative Type Ii Methyltransferase From
Anaeromyxobacter Dehalogenans
Length = 257
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 148 GCSDSQYFEELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRP----VL 203
GC Q L ++ E+ H DP ++ +A+R V AV DT L P V
Sbjct: 47 GCGSGQASLGLAEFF--ERV-HAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVA 103
Query: 204 RALNCDHWFD 213
A HWFD
Sbjct: 104 IAAQAXHWFD 113
>pdb|1YV9|A Chain A, Crystal Structure Of A Had-Like Phosphatase From
Enterococcus Faecalis V583
pdb|1YV9|B Chain B, Crystal Structure Of A Had-Like Phosphatase From
Enterococcus Faecalis V583
Length = 264
Score = 31.6 bits (70), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 225 KPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWLWGS 271
KP I +A LGV+ E + VGD+ D+ G D+ L S
Sbjct: 183 KPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTS 229
>pdb|4EEK|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From
Deinococcus Radiodurans R1 (Target Efi-501256) With
Bound Phosphate And Sodium
pdb|4EEL|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From
Deinococcus Radiodurans R1 (Target Efi-501256) With
Bound Citrate And Sodium
pdb|4EEN|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From
Deinococcus Radiodurans R1 (Target Efi-501256) With
Bound Magnesium
Length = 259
Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 175 AEKVFKAIRKAGVKLAVVSNFD-TRLRPVLRA-----LNCDHWFDXXXXXXXXXXXKPNP 228
A + +A+R AGV A+ SN + RL LR L +H +D KP+P
Sbjct: 115 AAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRG---KPHP 171
Query: 229 TIFLKACDLLGVKPEDAVHVGD 250
++ A LG+ PE V + D
Sbjct: 172 DLYTFAAQQLGILPERCVVIED 193
>pdb|1WVI|A Chain A, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
pdb|1WVI|B Chain B, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
pdb|1WVI|C Chain C, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
pdb|1WVI|D Chain D, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
Length = 257
Score = 31.2 bits (69), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 225 KPNPTIFLKACDLLGVKPEDAVHVGDDRRNDV 256
KP I KA D LGVK +A+ VGD+ D+
Sbjct: 181 KPEAVIMNKALDRLGVKRHEAIMVGDNYLTDI 212
>pdb|3PDW|A Chain A, Crystal Structure Of Putative P-Nitrophenyl Phosphatase
From Bacillus Subtilis
Length = 266
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 225 KPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWLWGSDV 273
KP I +A +LG + + VGD+ D+ +AG D L + V
Sbjct: 183 KPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGV 231
>pdb|3QGM|A Chain A, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|B Chain B, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|C Chain C, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|D Chain D, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
Length = 268
Score = 30.8 bits (68), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 225 KPNPTIFLKACDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWLWGSDVHSFKEVAQRI 283
KP+ I +A D+LG+ +D VGD DV + G + L + V + + + Q I
Sbjct: 187 KPSEVIXREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQXI 245
>pdb|1RKQ|A Chain A, Crystal Structure Of Had-Like Phosphatase Yida From E.
Coli
pdb|1RKQ|B Chain B, Crystal Structure Of Had-Like Phosphatase Yida From E.
Coli
Length = 282
Score = 30.8 bits (68), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 235 CDLLGVKPEDAVHVGDDRRNDVWGARDAGCDAWLWGSDVHSFKEVAQRI 283
D+LG+KPE+ + +G D+ ND+ AG + + + S KEVA +
Sbjct: 207 ADVLGIKPEEIMAIG-DQENDIAMIEYAGVGVAVDNA-IPSVKEVANFV 253
>pdb|3UMG|A Chain A, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|B Chain B, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|C Chain C, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|D Chain D, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|E Chain E, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|F Chain F, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|G Chain G, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|H Chain H, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
Length = 254
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 14/106 (13%)
Query: 151 DSQYFEELYNYYTTEKAWHLCDPEAEKV--FKAIRKAGVKLAVVSNFDTRLRPVLRALNC 208
DS +EL +AWH+ P + V AI KA + +SN +T L + A N
Sbjct: 101 DSGELDEL------ARAWHVLTPWPDSVPGLTAI-KAEYIIGPLSNGNTSLL-LDMAKNA 152
Query: 209 DHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPED----AVHVGD 250
+D KP+P +L+ +LG+ P + A H GD
Sbjct: 153 GIPWDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGD 198
>pdb|2I6X|A Chain A, The Structure Of A Predicted Had-like Family Hydrolase
From Porphyromonas Gingivalis
Length = 211
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 198 RLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGDDRRN 254
R P R L D +FD KPN IFL+ G KPE+ + + D N
Sbjct: 125 RFLPSGRTL--DSFFDKVYASCQXGKYKPNEDIFLEXIADSGXKPEETLFIDDGPAN 179
>pdb|3NAS|A Chain A, The Crystal Structure Of Beta-Phosphoglucomutase From
Bacillus Subtilis
pdb|3NAS|B Chain B, The Crystal Structure Of Beta-Phosphoglucomutase From
Bacillus Subtilis
Length = 233
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 173 PEAEKVFKAIRKAGVKLAVVSNFDTRLRP-VLRALNCDHWFDXXXXXXXXXXXKPNPTIF 231
P ++ ++ +K+ + S+ +R P +LR L F KP+P IF
Sbjct: 95 PGIGRLLCQLKNENIKIGLASS--SRNAPKILRRLAIIDDFHAIVDPTTLAKGKPDPDIF 152
Query: 232 LKACDLLGVKPEDAVHVGD 250
L A L V P D + D
Sbjct: 153 LTAAAXLDVSPADCAAIED 171
>pdb|1WR8|A Chain A, Crystal Structure Of Hypothetical Protein Ph1421 From
Pyrococcus Horikoshii.
pdb|1WR8|B Chain B, Crystal Structure Of Hypothetical Protein Ph1421 From
Pyrococcus Horikoshii
Length = 231
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 233 KACDLLGVKPEDAVHVGD 250
KA + LG+KP++ HVGD
Sbjct: 160 KASEFLGIKPKEVAHVGD 177
>pdb|3MC1|A Chain A, Crystal Structure Of A Predicted Phosphatase From
Clostridium Acetobutylicum
pdb|3MC1|B Chain B, Crystal Structure Of A Predicted Phosphatase From
Clostridium Acetobutylicum
Length = 226
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Query: 176 EKVFKAIRKAGVKLAVVSNFDTRL-RPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKA 234
E + +++ G L V ++ T + +L +FD + A
Sbjct: 92 EALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYA 151
Query: 235 CDLLGVKPEDAVHVGDDRRNDVWGA 259
+ L +K +DA+ +G DR DV GA
Sbjct: 152 XESLNIKSDDAIXIG-DREYDVIGA 175
>pdb|1Y3N|A Chain A, Structure Of Algq1, Alginate-binding Protein, Complexed
With An Alginate Disaccharide
pdb|1Y3P|A Chain A, Structure Of Algq1, Alginate-Binding Protein, Complexed
With An Alginate Tetrasaccharide
pdb|1Y3Q|A Chain A, Structure Of Algq1, Alginate-Binding Protein
pdb|3A09|A Chain A, Crystal Structure Of Sphingomonas Sp. A1 Alginate-Binding
Protein Algq1 In Complex With Unsaturated Trimannuronate
Length = 490
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Query: 255 DVWGARDAGCDAWL-----WGSDVHSFKEVAQRIGVK 286
+ WGAR G + W+ G H F EVA + G+K
Sbjct: 196 NFWGARSTGSNTWMDFYVENGKIKHPFAEVAFKDGIK 232
>pdb|3VLU|A Chain A, Crystal Structure Of Sphingomonas Sp. A1 Alginate-Binding
Protein Algq1 In Complex With Saturated Trimannuronate
pdb|3VLV|A Chain A, Crystal Structure Of Sphingomonas Sp. A1 Alginate-Binding
Ptotein Algq1 In Complex With Unsaturated Triguluronate
pdb|3VLW|A Chain A, Crystal Structure Of Sphingomonas Sp. A1 Alginate-Binding
Protein Algq1 In Complex With Mannuronate-Guluronate
Disaccharide
pdb|3VLW|B Chain B, Crystal Structure Of Sphingomonas Sp. A1 Alginate-Binding
Protein Algq1 In Complex With Mannuronate-Guluronate
Disaccharide
Length = 502
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Query: 255 DVWGARDAGCDAWL-----WGSDVHSFKEVAQRIGVK 286
+ WGAR G + W+ G H F EVA + G+K
Sbjct: 196 NFWGARSTGSNTWMDFYVENGKIKHPFAEVAFKDGIK 232
>pdb|3QNM|A Chain A, Haloalkane Dehalogenase Family Member From Bacteroides
Thetaiotaomicron Of Unknown Function
Length = 240
Score = 27.3 bits (59), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 173 PEAEKVFKAIRKAGVKLAVVSN-FDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIF 231
P A++V + + L ++SN F R+ D +F KP P IF
Sbjct: 110 PHAKEVLEYL-APQYNLYILSNGFRELQSRKXRSAGVDRYFKKIILSEDLGVLKPRPEIF 168
Query: 232 LKACDLLGVKPEDAVHVGDDRRNDVWGARDAG 263
A + +++ +GD D+ GA G
Sbjct: 169 HFALSATQSELRESLXIGDSWEADITGAHGVG 200
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,853,825
Number of Sequences: 62578
Number of extensions: 317146
Number of successful extensions: 896
Number of sequences better than 100.0: 61
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 833
Number of HSP's gapped (non-prelim): 72
length of query: 287
length of database: 14,973,337
effective HSP length: 98
effective length of query: 189
effective length of database: 8,840,693
effective search space: 1670890977
effective search space used: 1670890977
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)