BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023118
(287 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225463131|ref|XP_002265897.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
gi|297739345|emb|CBI29335.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 329 bits (844), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 158/241 (65%), Positives = 198/241 (82%), Gaps = 1/241 (0%)
Query: 46 RHRTLNL-VPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMG 104
R R ++L + +H KDS A VESG F DG WLLK KG+EVAS L+G+C+FLVGMMG
Sbjct: 45 RQRRVSLGISSHYCKDSQAPAVESGNFYACFDGNWLLKKKGQEVASNLNGRCIFLVGMMG 104
Query: 105 SGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLV 164
SGKTTVG+ILS+AL Y+F DSD +VEK +GGTSV+QIF + GE +FR+YES+AL+KL+ +
Sbjct: 105 SGKTTVGKILSEALGYSFVDSDTFVEKAVGGTSVSQIFNQCGEKFFRDYESEALRKLASI 164
Query: 165 PQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYT 224
P+QVVATGGGAVVRP+NW++M+QG++VFL+VPLD LARRIA VGTDS PLL ++S D+YT
Sbjct: 165 PKQVVATGGGAVVRPINWKYMKQGVSVFLDVPLDTLARRIADVGTDSRPLLHFESGDAYT 224
Query: 225 KAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNS 284
KAF L LSK+R+EAYANADATVSL ++AA +GL+D+ DITP IAMEVLVQ + YL
Sbjct: 225 KAFVGLFTLSKKRTEAYANADATVSLQHIAARLGLEDISDITPAAIAMEVLVQIENYLQG 284
Query: 285 K 285
K
Sbjct: 285 K 285
>gi|147856126|emb|CAN80290.1| hypothetical protein VITISV_016550 [Vitis vinifera]
Length = 294
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/241 (64%), Positives = 197/241 (81%), Gaps = 1/241 (0%)
Query: 46 RHRTLNL-VPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMG 104
R R ++L + +H KDS A VESG F DG WLLK KG+EVAS L+G+C+FLVGMMG
Sbjct: 45 RQRRVSLGISSHYCKDSQAPAVESGNFYACFDGNWLLKKKGQEVASNLNGRCIFLVGMMG 104
Query: 105 SGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLV 164
SGKTTVG+ILS+ L Y+F DSD +VEK +GGTSV+QIF + GE +FR+YES+AL+KL+ +
Sbjct: 105 SGKTTVGKILSEXLGYSFVDSDTFVEKAVGGTSVSQIFNQCGEKFFRDYESEALRKLASI 164
Query: 165 PQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYT 224
P+QVVATGGGAVVRP+NW++M+QG++VFL+VPLD LARRIA VGTDS PLL ++S D+YT
Sbjct: 165 PKQVVATGGGAVVRPINWKYMKQGVSVFLDVPLDXLARRIADVGTDSRPLLHFESGDAYT 224
Query: 225 KAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNS 284
KAF L LSK+R+EAYANADATVSL ++AA +GL+D+ D+TP IAMEVLVQ + YL
Sbjct: 225 KAFVGLFTLSKKRTEAYANADATVSLQHIAASLGLEDISDVTPAAIAMEVLVQIENYLQG 284
Query: 285 K 285
K
Sbjct: 285 K 285
>gi|255572361|ref|XP_002527119.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
gi|223533542|gb|EEF35282.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
Length = 282
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/283 (55%), Positives = 195/283 (68%), Gaps = 18/283 (6%)
Query: 5 TYGSTLQFSTSVGGE--------IGSFNQNCKRQQTQQHFINLNPLKLKR------HRTL 50
T L FS G E + F++ CKR+ N L+ KR R
Sbjct: 3 TSSHALNFSMRTGHERIEVKQNSVIGFSKRCKRK----CIANCGALQRKREYVFVQQRRF 58
Query: 51 NLVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTV 110
+ ++ +D A + SG C S DG WLLK KG++VAS L G C+FLVGMMGSGKTTV
Sbjct: 59 YVGISNACRDPLAPSLLSGNICGSFDGYWLLKTKGKKVASGLKGCCVFLVGMMGSGKTTV 118
Query: 111 GEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVA 170
G+ILS+AL YTF DSD+YVE+ GG SV+ IF++ GE YFR+ ES+ALQKLS++P+QVVA
Sbjct: 119 GKILSEALGYTFVDSDEYVEQTAGGNSVSHIFQQYGEDYFRDIESEALQKLSIIPRQVVA 178
Query: 171 TGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTAL 230
TGGG+VVRP+NW++MRQGITVFL+VPLDALARRIAAVGTDS PLL DS D YTKAF L
Sbjct: 179 TGGGSVVRPINWKYMRQGITVFLDVPLDALARRIAAVGTDSRPLLHLDSGDPYTKAFMGL 238
Query: 231 SALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAME 273
LSK+R EAY++AD VSLL+LA +G +DV D+ P IA+
Sbjct: 239 FTLSKKRVEAYSDADVIVSLLDLADDLGFEDVSDVGPAAIALR 281
>gi|356509036|ref|XP_003523258.1| PREDICTED: shikimate kinase, chloroplastic-like [Glycine max]
Length = 299
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/237 (53%), Positives = 174/237 (73%)
Query: 46 RHRTLNLVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGS 105
R RT +LV A + A +E G+F S++ K +LK K +E+ L G+C++LVGMM S
Sbjct: 57 RRRTASLVVACSHNNIPASALEYGSFHSSVEEKLILKIKSQEIEPYLSGRCIYLVGMMAS 116
Query: 106 GKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVP 165
GKTTVG ILS+AL Y+F DSD V K +GG SV IFK GE +FR E++ LQK+S++
Sbjct: 117 GKTTVGRILSEALSYSFYDSDALVVKEVGGISVTDIFKHYGEPFFRNKETEVLQKVSIMH 176
Query: 166 QQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTK 225
+ +++TGGGAVVRP+NW++M+QGI+V+L+VP++ L +RI A GTDS PLL Y+ D+YTK
Sbjct: 177 RHLISTGGGAVVRPINWKYMQQGISVWLDVPVEVLTQRITAEGTDSRPLLHYEGGDAYTK 236
Query: 226 AFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
T LS+L +ERSEAYANA+ VSL N+AA +G +DVLD++PT IAME L Q + +L
Sbjct: 237 TITHLSSLFEERSEAYANANVKVSLENMAAKLGRRDVLDLSPTAIAMEALEQIKGFL 293
>gi|380505030|gb|AFD62803.1| shikimate kinase, partial [Ipomoea purpurea]
Length = 298
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 137/269 (50%), Positives = 183/269 (68%), Gaps = 3/269 (1%)
Query: 22 SFNQNCKRQQTQQHFI--NLNPLKLKR-HRTLNLVPAHVSKDSNAHDVESGTFCDSLDGK 78
SF++ + + Q FI + P+K K HR L + S++S A +ES SLD
Sbjct: 30 SFSKCQTKHRRSQMFISCHFQPIKAKSWHRPCLLTASCSSQNSQASIMESENSLPSLDEI 89
Query: 79 WLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSV 138
+LK+K E+ CL G+C++LVGMMGSGKTTVG I+++AL Y F D D +E+ +GGTSV
Sbjct: 90 QVLKSKSEEIEPCLSGRCIYLVGMMGSGKTTVGRIIAEALGYAFFDCDTLIEQAVGGTSV 149
Query: 139 AQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLD 198
A+IFK GE +FR+ E++ L+KLSL+ + VV+TGGGAVVRP+NWR+M +GI+V+L+VP+D
Sbjct: 150 AEIFKLHGEGFFRDNETEVLRKLSLMREVVVSTGGGAVVRPINWRYMHKGISVWLDVPVD 209
Query: 199 ALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIG 258
ALARRI+AVGT S PLL +S D Y K LS L ER +AYAN+ A V L N+AA G
Sbjct: 210 ALARRISAVGTHSRPLLHNESGDIYAKTLKRLSTLLDERGDAYANSKARVCLENIAAKSG 269
Query: 259 LKDVLDITPTTIAMEVLVQAQKYLNSKRR 287
DV ITPT IA+E LVQ +L + R
Sbjct: 270 CIDVCTITPTEIAIEALVQIGNFLKKESR 298
>gi|255646624|gb|ACU23786.1| unknown [Glycine max]
Length = 299
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 126/237 (53%), Positives = 174/237 (73%)
Query: 46 RHRTLNLVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGS 105
R RT +LV A + A +E G+F S++ K +LK K +E+ L G+C++LVGMM S
Sbjct: 57 RRRTASLVVACSHNNIPASALEYGSFHSSVEEKLILKIKSQEIEPYLSGRCIYLVGMMAS 116
Query: 106 GKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVP 165
GKTTVG ILS+AL Y+F DSD V K +GG SV IFK GE +FR E++ LQK+S++
Sbjct: 117 GKTTVGRILSEALSYSFYDSDALVVKEVGGISVTDIFKHYGEPFFRNKETEVLQKVSIMH 176
Query: 166 QQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTK 225
+ +++TGGGAVVRP++W++M+QGI+V+L+VP++ L +RI A GTDS PLL Y+ D+YTK
Sbjct: 177 RHLISTGGGAVVRPIDWKYMQQGISVWLDVPVEVLTQRITAEGTDSRPLLHYEGGDAYTK 236
Query: 226 AFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
T LS+L +ERSEAYANA+ VSL N+AA +G +DVLD++PT IAME L Q + +L
Sbjct: 237 TITHLSSLFEERSEAYANANVKVSLENMAAKLGRRDVLDLSPTAIAMEALEQIKGFL 293
>gi|222136867|gb|ACM45083.1| shikimate kinase [Vitis vinifera]
Length = 300
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/263 (50%), Positives = 183/263 (69%), Gaps = 5/263 (1%)
Query: 23 FNQNCKRQQTQQ---HFINLNPLKLKRHRTLNLVPAHVSKDSNAHDVESGTFCDSLDGKW 79
F+Q + Q HF ++H L ++ ++ A +ESG+F SLD
Sbjct: 30 FSQKLREQHGHPISCHFQPRRTSNWQKHVALEASGSY--RNFPAPILESGSFPPSLDEAL 87
Query: 80 LLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVA 139
+LK K +E+ +DG+C++LVGMMGSGKTT+G+ILS+ L Y+F DSD VE + GTSVA
Sbjct: 88 ILKNKSQEILPYIDGRCVYLVGMMGSGKTTIGKILSEVLGYSFCDSDTLVELAVKGTSVA 147
Query: 140 QIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDA 199
+IF GE +FR ES+ LQKLSL VV+TGGGAV+RP+NW++M +GI+V+L+VPL+A
Sbjct: 148 EIFNLYGEGFFRNKESETLQKLSLTHHMVVSTGGGAVIRPINWKYMAKGISVWLDVPLEA 207
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL 259
LARRI+AVGT+S PLL +DS D+Y + T LS L KER +AYANA+A VSL +AA +G
Sbjct: 208 LARRISAVGTNSRPLLHHDSGDAYNRTLTRLSNLWKERGDAYANANARVSLEEIAAKLGH 267
Query: 260 KDVLDITPTTIAMEVLVQAQKYL 282
+DV ++TPT IA+E L+Q + +L
Sbjct: 268 RDVTNLTPTVIAIEALLQIEAFL 290
>gi|225438559|ref|XP_002279932.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
gi|147772563|emb|CAN67344.1| hypothetical protein VITISV_038221 [Vitis vinifera]
gi|296082504|emb|CBI21509.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/263 (50%), Positives = 183/263 (69%), Gaps = 5/263 (1%)
Query: 23 FNQNCKRQQTQQ---HFINLNPLKLKRHRTLNLVPAHVSKDSNAHDVESGTFCDSLDGKW 79
F+Q + Q HF ++H L ++ ++ A +ESG+F SLD
Sbjct: 30 FSQKLREQHGHPISCHFQPRRTSNWQKHVALEASGSY--RNFPAPILESGSFPPSLDEAL 87
Query: 80 LLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVA 139
+LK K +E+ +DG+C++LVGMMGSGKTT+G+ILS+ L Y+F DSD VE + GTSVA
Sbjct: 88 ILKNKSQEILPYIDGRCVYLVGMMGSGKTTIGKILSEVLGYSFCDSDTLVELAVKGTSVA 147
Query: 140 QIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDA 199
+IF GE +FR ES+ LQKLSL VV+TGGGAV+RP+NW++M +GI+V+L+VPL+A
Sbjct: 148 EIFNLYGEGFFRNKESETLQKLSLTHHMVVSTGGGAVIRPINWKYMAKGISVWLDVPLEA 207
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL 259
LARRI+AVGT+S PLL +DS D+Y + T LS L KER +AYANA+A VSL +AA +G
Sbjct: 208 LARRISAVGTNSRPLLHHDSGDAYNRTLTRLSNLWKERGDAYANANARVSLEEIAAKLGH 267
Query: 260 KDVLDITPTTIAMEVLVQAQKYL 282
+DV ++TPT IA+E L+Q + +L
Sbjct: 268 RDVTNLTPTVIAIEALLQIEAFL 290
>gi|224066583|ref|XP_002302148.1| shikimate kinase [Populus trichocarpa]
gi|222843874|gb|EEE81421.1| shikimate kinase [Populus trichocarpa]
Length = 223
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/222 (59%), Positives = 167/222 (75%), Gaps = 2/222 (0%)
Query: 66 VESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADS 125
+ESG D + LLK K +E+A CL+ C+FL+GMMG GKTTVG++LS+AL Y F DS
Sbjct: 1 MESGDLYAFFDER-LLKKKAKELAPCLNSCCIFLIGMMGCGKTTVGKVLSEALGYAFVDS 59
Query: 126 DKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM 185
D VE+ +G SVAQIF++ GE+ FR+ ESKALQ+LSL QQVVATG GAV+ P+NW +M
Sbjct: 60 DTCVEQAVGEISVAQIFQKHGESVFRDNESKALQELSLKSQQVVATGDGAVLHPINWEYM 119
Query: 186 RQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANAD 245
R+GITVFL+VPLDALARRIAAVGTDS PLLD+DS D YTKA LS L ++R E ++AD
Sbjct: 120 RKGITVFLDVPLDALARRIAAVGTDSRPLLDFDSGDPYTKALMRLSTLLEKRVEKCSSAD 179
Query: 246 ATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSKRR 287
TVSL LA + +DV +TPT IA+EVL Q +KYL K++
Sbjct: 180 VTVSLSKLADDLE-EDVSHLTPTIIAIEVLEQIEKYLRGKKK 220
>gi|356525535|ref|XP_003531380.1| PREDICTED: shikimate kinase, chloroplastic-like [Glycine max]
Length = 295
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 124/242 (51%), Positives = 177/242 (73%)
Query: 44 LKRHRTLNLVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMM 103
+ R RT L + + +A +ESG+ LD + +LK + +E+ L+G+C++LVGMM
Sbjct: 47 MMRRRTTALEVSCSYGNISASILESGSVRAPLDEELILKNRSQEIQPYLNGRCIYLVGMM 106
Query: 104 GSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSL 163
GSGKTTVG+I+S L Y+F DSD VE+ +GG SVA IFK+ GE +FR E++ L KLSL
Sbjct: 107 GSGKTTVGKIMSQVLGYSFCDSDALVEEEVGGNSVADIFKQHGETFFRNKETEVLHKLSL 166
Query: 164 VPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSY 223
+ Q V++TGGGAV RP+NW++M +G++V+L+VP++ALA+RIAAVGT+S PLL Y++ D Y
Sbjct: 167 MHQLVISTGGGAVTRPINWKYMHKGVSVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDPY 226
Query: 224 TKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLN 283
T+AF LSAL +ER EAYANA+A VSL N+A +G +DV +++PT IA+E L Q +L
Sbjct: 227 TRAFMRLSALFEERGEAYANANARVSLKNIAIKLGKRDVSELSPTDIAIEALEQIDNFLK 286
Query: 284 SK 285
+
Sbjct: 287 GE 288
>gi|356507492|ref|XP_003522498.1| PREDICTED: LOW QUALITY PROTEIN: shikimate kinase,
chloroplastic-like [Glycine max]
Length = 311
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/225 (55%), Positives = 171/225 (76%), Gaps = 4/225 (1%)
Query: 62 NAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLV----GMMGSGKTTVGEILSDA 117
+A ++SG+F +D +LK+K +E+ L+G+C++LV GMMGSGKTTVG+ILS
Sbjct: 81 SASTLQSGSFHAPVDEMLILKSKSQEIEPYLNGRCIYLVDQSLGMMGSGKTTVGKILSQV 140
Query: 118 LDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVV 177
L Y F DSD VE+ + GT+VA IFK +GE +FR E++ L+KLS++ + V++TGGGAVV
Sbjct: 141 LSYLFFDSDALVEEEVDGTAVADIFKHNGEPFFRNKETEVLRKLSMMHRYVISTGGGAVV 200
Query: 178 RPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKER 237
RP+NW++M+QGI+V+L+VP++ALA+RI AVGTDS PLL Y+ D+YTK F LSAL KER
Sbjct: 201 RPINWKYMQQGISVWLDVPVEALAQRITAVGTDSRPLLHYEEGDAYTKTFMRLSALFKER 260
Query: 238 SEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
SEAYANA+ VSL N+AA +G +D D++PT IAME L Q + +L
Sbjct: 261 SEAYANANVKVSLENMAAKLGSRDESDLSPTAIAMEALEQIKGFL 305
>gi|388514859|gb|AFK45491.1| unknown [Lotus japonicus]
Length = 299
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/252 (50%), Positives = 187/252 (74%), Gaps = 3/252 (1%)
Query: 34 QHFIN--LNPLKLKRHRTLNLVPAHVSKDS-NAHDVESGTFCDSLDGKWLLKAKGREVAS 90
Q F++ L+ L+ + RT+ +V A S ++ A +E+G+F D LD + +LK+K +E+
Sbjct: 42 QGFVSHRLSLLQRSQQRTVPVVVACSSYNNIPASILETGSFRDPLDEEMILKSKSQEIEP 101
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L+G+C++LVGMMGSGKTTVG+ILS+ L Y+F DSD +E+ + TSVA IFK GEA+F
Sbjct: 102 YLNGRCIYLVGMMGSGKTTVGKILSEVLSYSFFDSDALIEEEVDKTSVADIFKNYGEAFF 161
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD 210
R E++ L+KLS++ + V++TGGGAVV+P NW++M +GI+V+L+VP++ALARRI VGT+
Sbjct: 162 RNKETEILKKLSMMRRDVISTGGGAVVKPTNWKYMHKGISVWLDVPVEALARRITKVGTN 221
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTI 270
S PLL Y++ D+YTK F LS+L +ERSEA+ANA+A VSL N+AA + KD ++P TI
Sbjct: 222 SRPLLHYEAGDAYTKTFMRLSSLFEERSEAHANANARVSLENIAAKLDQKDASHLSPKTI 281
Query: 271 AMEVLVQAQKYL 282
A+E L Q +L
Sbjct: 282 AIEALEQINGFL 293
>gi|449448562|ref|XP_004142035.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 229
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 163/211 (77%)
Query: 75 LDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMG 134
D LLK K +EV L+GQC++LVGMMGSGKTT+G+IL+ L YTF+DSD VE+ +G
Sbjct: 13 FDKDLLLKNKSQEVQPHLNGQCIYLVGMMGSGKTTIGKILAKELGYTFSDSDTLVEQEVG 72
Query: 135 GTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLN 194
GTSVA IFK GE +FR+ E++ L+KLSL+ V++TGGG VVRP+NW++MR GI+++L+
Sbjct: 73 GTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVISTGGGIVVRPINWKYMRNGISIWLD 132
Query: 195 VPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLA 254
VPL+ALA+RIAAVGTDS PLL ++S ++YTKAF LS L +ER +AYANA+A V L +LA
Sbjct: 133 VPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRLSVLLEERGDAYANANAKVCLGSLA 192
Query: 255 ACIGLKDVLDITPTTIAMEVLVQAQKYLNSK 285
+GL DV ++TP IA+E LVQ Q +L +
Sbjct: 193 DKLGLSDVCNLTPADIAVEALVQIQNFLEQE 223
>gi|76782196|gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]
Length = 302
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 175/239 (73%)
Query: 47 HRTLNLVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSG 106
H+T +L + K+ A +ESG D +LK K +E+ L G+C++LVGMMGSG
Sbjct: 58 HKTASLEVSCSYKNFPASVLESGGIHAPFDDALILKNKSQEIEPYLSGRCIYLVGMMGSG 117
Query: 107 KTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQ 166
KTTVG++LS L Y F DSD VE+ + SVA+IF GE +FR+ E++ L+KLSL+ +
Sbjct: 118 KTTVGKVLSQVLSYAFFDSDTLVEQDVDANSVAEIFNLYGEGFFRDKETEVLRKLSLMHR 177
Query: 167 QVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKA 226
VV+TGGGAVVRP+NW++M++GI+V+L+VPL+ALARRIAAVGT S PLL +DS D+YTK
Sbjct: 178 LVVSTGGGAVVRPINWKYMQKGISVWLDVPLEALARRIAAVGTGSRPLLHHDSGDAYTKT 237
Query: 227 FTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSK 285
F L++L +ERSEAYANA+A VSL ++AA +G +DV ++TPT IA+E L Q + +L +
Sbjct: 238 FMRLTSLMEERSEAYANANARVSLEDVAAKLGHRDVSNLTPTAIAIEALEQIEGFLKEE 296
>gi|449521902|ref|XP_004167968.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 300
Score = 249 bits (637), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 121/211 (57%), Positives = 163/211 (77%)
Query: 75 LDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMG 134
D LLK K +EV L+G+C++LVGMMGSGKTT+G+IL+ L YTF+DSD VE+ +G
Sbjct: 84 FDKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTIGKILAKELGYTFSDSDTLVEQEVG 143
Query: 135 GTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLN 194
GTSVA IFK GE +FR+ E++ L+KLSL+ V++TGGG VVRP+NW++MR GI+++L+
Sbjct: 144 GTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVISTGGGIVVRPINWKYMRNGISIWLD 203
Query: 195 VPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLA 254
VPL+ALA+RIAAVGTDS PLL ++S ++YTKAF LS L +ER +AYANA+A V L +LA
Sbjct: 204 VPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRLSVLLEERGDAYANANAKVCLGSLA 263
Query: 255 ACIGLKDVLDITPTTIAMEVLVQAQKYLNSK 285
+GL DV ++TP IA+E LVQ Q +L +
Sbjct: 264 DKLGLSDVCNLTPADIAVEALVQIQNFLEQE 294
>gi|388510434|gb|AFK43283.1| unknown [Lotus japonicus]
Length = 299
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/273 (46%), Positives = 187/273 (68%), Gaps = 5/273 (1%)
Query: 18 GEIGSFNQNCKRQQTQQ-----HFINLNPLKLKRHRTLNLVPAHVSKDSNAHDVESGTFC 72
G I + + N R Q + + L+ K+ R R ++ A + A +ESG+
Sbjct: 20 GRIPTCSFNLSRDQPLKLRGSIYSAKLHSSKIHRRRIASMEVACSYDNLPASTLESGSRR 79
Query: 73 DSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKL 132
LD + +L+ + +E+ L+G+C++LVGMMGSGKTTVG+I+S L Y F DSD VE+
Sbjct: 80 APLDDELILENRSQEIQPYLNGRCIYLVGMMGSGKTTVGKIMSKVLGYEFCDSDALVEEE 139
Query: 133 MGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVF 192
+GG SVA IF GE++FR+ E++AL KLS++ + +V+TGGGAV+RP+NW++M +GI+V+
Sbjct: 140 VGGNSVADIFNLYGESFFRDKETEALHKLSMMHRHIVSTGGGAVMRPINWKYMHKGISVW 199
Query: 193 LNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
L+VP++ALA+RIAAVGT+S PLL Y++ D+YT+A LSAL +ER EAYANA A VSL
Sbjct: 200 LDVPVEALAQRIAAVGTNSRPLLHYEAGDAYTRALMRLSALFEERGEAYANASARVSLEK 259
Query: 253 LAACIGLKDVLDITPTTIAMEVLVQAQKYLNSK 285
+A G +DVLD++PT IA+E L Q +L +
Sbjct: 260 IATKRGQRDVLDLSPTAIAIEALEQIDAFLKGE 292
>gi|449461431|ref|XP_004148445.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
gi|449503057|ref|XP_004161818.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 302
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/222 (53%), Positives = 169/222 (76%), Gaps = 1/222 (0%)
Query: 61 SNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDY 120
+N+ +ESG C S+D ++ K RE+ S L+G+C++LVGMMGSGKTTVG++LS+AL Y
Sbjct: 73 NNSSVLESGNHCASVDETLAIQRKSREIESYLNGRCIYLVGMMGSGKTTVGKVLSNALGY 132
Query: 121 TFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPL 180
+F+DSD VE+ MG SVA++FK GE +FRE E++AL+KLSL+ Q V++TGGGAV R +
Sbjct: 133 SFSDSDSLVEQDMG-ISVAEVFKVYGEDFFRERETEALRKLSLMRQFVISTGGGAVTRSI 191
Query: 181 NWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEA 240
NW++M +GI+V+L+VPL+AL +RI+AVGT+S PLL +DS D+Y+K LS L +ER EA
Sbjct: 192 NWKYMHKGISVWLDVPLEALVKRISAVGTNSRPLLHHDSNDAYSKTLVRLSTLLEERGEA 251
Query: 241 YANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
YANA+ VS +AA +G KDV ++TP IA+E L + + +L
Sbjct: 252 YANAEVKVSCEKIAAKLGTKDVSNVTPMAIAIEALEEIETFL 293
>gi|297605427|ref|NP_001057199.2| Os06g0225800 [Oryza sativa Japonica Group]
gi|75107689|sp|Q5NTH3.1|SK2_ORYSJ RecName: Full=Shikimate kinase 2, chloroplastic; Short=OsSK2;
Flags: Precursor
gi|56805579|dbj|BAD83413.1| shikimate kinase 2 [Oryza sativa Japonica Group]
gi|218197836|gb|EEC80263.1| hypothetical protein OsI_22231 [Oryza sativa Indica Group]
gi|255676848|dbj|BAF19113.2| Os06g0225800 [Oryza sativa Japonica Group]
Length = 307
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/231 (54%), Positives = 169/231 (73%), Gaps = 4/231 (1%)
Query: 52 LVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVG 111
L P + K S HD + +S+D LLK K EV L+G+C++LVGMMGSGK+TV
Sbjct: 56 LAPLYCLKASRGHD----SLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVA 111
Query: 112 EILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVAT 171
+IL++ L Y+F DSDK VE+ +G SVAQIFKE EA+FR+ ES L+ LS + + VVAT
Sbjct: 112 KILAEVLGYSFFDSDKLVEQAVGMPSVAQIFKEHSEAFFRDNESSVLRDLSSMRRLVVAT 171
Query: 172 GGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALS 231
GGGAV+RP+NW++M++G++V+L+VPLDALARRIA VGT S PLLD S+D YT AF+ LS
Sbjct: 172 GGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAQVGTASRPLLDQPSSDPYTAAFSKLS 231
Query: 232 ALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
L+++R +AYANADA VSL +AA G DV +TPT IA+E L++ + ++
Sbjct: 232 MLAEQRGDAYANADARVSLEEIAAKQGHDDVSKLTPTDIAIEALLKIENFV 282
>gi|316995679|emb|CBY85385.1| shikimate kinase [Cucumis sativus]
Length = 302
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/222 (53%), Positives = 168/222 (75%), Gaps = 1/222 (0%)
Query: 61 SNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDY 120
+N+ +ESG C S+D ++ K RE+ S L+G+C++LVGMMGSGKTTVG++LS+AL Y
Sbjct: 73 NNSSVLESGNHCASVDETLAIQRKSREIESYLNGRCIYLVGMMGSGKTTVGKVLSNALGY 132
Query: 121 TFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPL 180
+F+DSD VE+ MG SVA++FK GE +FRE E++AL KLSL+ Q V++TGGGAV R +
Sbjct: 133 SFSDSDSLVEQDMG-ISVAEVFKVYGEDFFRERETEALGKLSLMRQFVISTGGGAVTRSI 191
Query: 181 NWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEA 240
NW++M +GI+V+L+VPL+AL +RI+AVGT+S PLL +DS D+Y+K LS L +ER EA
Sbjct: 192 NWKYMHKGISVWLDVPLEALVKRISAVGTNSRPLLHHDSNDAYSKTLVRLSTLLEERGEA 251
Query: 241 YANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
YANA+ VS +AA +G KDV ++TP IA+E L + + +L
Sbjct: 252 YANAEVKVSCEKIAAKLGTKDVSNVTPMAIAIEALEEIETFL 293
>gi|224083807|ref|XP_002307130.1| shikimate kinase [Populus trichocarpa]
gi|222856579|gb|EEE94126.1| shikimate kinase [Populus trichocarpa]
Length = 286
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/256 (51%), Positives = 183/256 (71%), Gaps = 4/256 (1%)
Query: 23 FNQNCKRQQTQQHFIN--LNPLKLK-RHRTLNLVPAHVSKDSNAHDVESGTFCDSLDGKW 79
F+ K Q+ Q F++ P++ + RHR + + +S +ES + D LD +
Sbjct: 31 FSGRLKEQKRLQVFVSAQFRPVRDENRHRLASFEVSRSYNNSRVSTLESESLQDLLDDEA 90
Query: 80 L-LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSV 138
L LK K +E+ L+G+C++LVGMMGSGKTTVG+ILS A+ Y+F DSD VEK +G TSV
Sbjct: 91 LILKNKSQEIEPYLNGRCIYLVGMMGSGKTTVGKILSQAIHYSFCDSDTLVEKDVGVTSV 150
Query: 139 AQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLD 198
A+IF+ GE +FR+ E++AL+KLSL + VV+TGGGAV++ NW +MR+GI+V+L+VPL+
Sbjct: 151 AEIFQIYGEDFFRDKETEALEKLSLEHRYVVSTGGGAVIQDENWTYMRKGISVWLDVPLE 210
Query: 199 ALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIG 258
LA+RIAAVGT + PLLD + D+YTKAF LSAL ++R +AY NA+A VSL N+AA +G
Sbjct: 211 ELAQRIAAVGTKTRPLLDREPGDAYTKAFRRLSALFEQRYKAYENANARVSLENIAAKLG 270
Query: 259 LKDVLDITPTTIAMEV 274
KDV +ITP IA+EV
Sbjct: 271 YKDVSNITPPMIAIEV 286
>gi|222635237|gb|EEE65369.1| hypothetical protein OsJ_20662 [Oryza sativa Japonica Group]
Length = 272
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 162/213 (76%)
Query: 70 TFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYV 129
+ +S+D LLK K EV L+G+C++LVGMMGSGK+TV +IL++ L Y+F DSDK V
Sbjct: 35 SLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVAKILAEVLGYSFFDSDKLV 94
Query: 130 EKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGI 189
E+ +G SVAQIFKE EA+FR+ ES L+ LS + + VVATGGGAV+RP+NW++M++G+
Sbjct: 95 EQAVGMPSVAQIFKEHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNWKYMKKGL 154
Query: 190 TVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
+V+L+VPLDALARRIA VGT S PLLD S+D YT AF+ LS L+++R +AYANADA VS
Sbjct: 155 SVWLDVPLDALARRIAQVGTASRPLLDQPSSDPYTAAFSKLSMLAEQRGDAYANADARVS 214
Query: 250 LLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
L +AA G DV +TPT IA+E L++ + ++
Sbjct: 215 LEEIAAKQGHDDVSKLTPTDIAIEALLKIENFV 247
>gi|75107690|sp|Q5NTH4.1|SK1_ORYSJ RecName: Full=Shikimate kinase 1, chloroplastic; Short=OsSK1;
Flags: Precursor
gi|56805577|dbj|BAD83412.1| shikimate kinase 1 [Oryza sativa Japonica Group]
Length = 308
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/231 (52%), Positives = 164/231 (70%), Gaps = 4/231 (1%)
Query: 52 LVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVG 111
+ P K S H+ T +S+D LLK K EV L+G+C++LVGMMGSGK+TVG
Sbjct: 58 VAPLRAKKSSGGHE----TLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVG 113
Query: 112 EILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVAT 171
+I+S+ L Y+F DSDK VE+ +G SVAQIFK EA+FR+ ES L+ LS + + VVAT
Sbjct: 114 KIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVAT 173
Query: 172 GGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALS 231
GGGAV+RP+NW++M++G++V+L+VPLDALARRIA VGT S PLLD S D YT AF+ LS
Sbjct: 174 GGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQPSGDPYTMAFSKLS 233
Query: 232 ALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
L+++R +AYANAD VSL +A+ G DV +TPT IA+E + + ++
Sbjct: 234 MLAEQRGDAYANADVRVSLEEIASKQGHDDVSKLTPTDIAIESFHKIENFV 284
>gi|226495257|ref|NP_001149678.1| shikimate kinase [Zea mays]
gi|194700058|gb|ACF84113.1| unknown [Zea mays]
gi|194700758|gb|ACF84463.1| unknown [Zea mays]
gi|195629356|gb|ACG36319.1| shikimate kinase [Zea mays]
gi|413924549|gb|AFW64481.1| Shikimate kinase [Zea mays]
Length = 303
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/231 (52%), Positives = 164/231 (70%), Gaps = 4/231 (1%)
Query: 52 LVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVG 111
+VP K S H+ +S+D LLK K EV L+G+C++LVGMMGSGK+TVG
Sbjct: 53 VVPLRAKKSSGGHE----NLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVG 108
Query: 112 EILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVAT 171
+I+S+ L Y+F DSDK VE+ +G SVAQIFK EA+FR+ ES L+ LS + + VVAT
Sbjct: 109 KIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVAT 168
Query: 172 GGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALS 231
GGGAV+RP+NW++M++G++V+L+VPLDALARRIA VGT S PLLD S D YT AF+ LS
Sbjct: 169 GGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQPSGDPYTMAFSKLS 228
Query: 232 ALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
L+++R +AYANAD VSL +A+ G DV + PT IA+E L + + ++
Sbjct: 229 MLAEQRGDAYANADVRVSLEEIASKQGHGDVSKLMPTDIAIESLHKIESFV 279
>gi|125541140|gb|EAY87535.1| hypothetical protein OsI_08943 [Oryza sativa Indica Group]
Length = 401
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 121/231 (52%), Positives = 164/231 (70%), Gaps = 4/231 (1%)
Query: 52 LVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVG 111
+ P K S H+ T +S+D LLK K EV L+G+C++LVGMMGSGK+TVG
Sbjct: 58 VAPLRAKKSSGGHE----TLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVG 113
Query: 112 EILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVAT 171
+I+S+ L Y+F DSDK VE+ +G SVAQIFK EA+FR+ ES L+ LS + + VVAT
Sbjct: 114 KIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVAT 173
Query: 172 GGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALS 231
GGGAV+RP+NW++M++G++V+L+VPLDALARRIA VGT S PLLD S D YT AF+ LS
Sbjct: 174 GGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQPSGDPYTMAFSKLS 233
Query: 232 ALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
L+++R +AYANAD VSL +A+ G DV +TPT IA+E + + ++
Sbjct: 234 MLAEQRGDAYANADVRVSLEEIASKQGHDDVSKLTPTDIAIESFHKIENFV 284
>gi|242077364|ref|XP_002448618.1| hypothetical protein SORBIDRAFT_06g030260 [Sorghum bicolor]
gi|241939801|gb|EES12946.1| hypothetical protein SORBIDRAFT_06g030260 [Sorghum bicolor]
Length = 300
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/234 (51%), Positives = 169/234 (72%)
Query: 52 LVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVG 111
L PA + +A +G S D +L+ K ++V LDG+C++LVGMMGSGKTTVG
Sbjct: 62 LRPAKLRVSCSAKSAGTGKVHYSTDEALILQQKAQDVLPYLDGRCVYLVGMMGSGKTTVG 121
Query: 112 EILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVAT 171
+IL++ L Y+F DSDK VEK +G +SVA+IF+ EA+FR+ ES+ L+ LS + + VVAT
Sbjct: 122 KILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFRDNESEVLRDLSSMHRLVVAT 181
Query: 172 GGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALS 231
GGGAV+RP+NW +M++G+TV+L+VPLDALARRIAAVGT S PLL +S D Y KA+ L+
Sbjct: 182 GGGAVIRPINWSYMKKGLTVWLDVPLDALARRIAAVGTASRPLLHQESGDPYAKAYAKLT 241
Query: 232 ALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSK 285
+L ++R ++YANADA VSL ++A G DV +TP+ IA+E L++ + +L K
Sbjct: 242 SLFEQRMDSYANADARVSLEHIALKQGHNDVTILTPSAIAIEALLKMESFLTEK 295
>gi|357124743|ref|XP_003564057.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 302
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 158/213 (74%)
Query: 70 TFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYV 129
T +S+D LLK K EV L+G+C++LVGMMGSGK+TVG+IL++ L Y++ DSD V
Sbjct: 77 TLHNSVDEALLLKRKAEEVLFELNGRCIYLVGMMGSGKSTVGKILAEVLGYSYFDSDSLV 136
Query: 130 EKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGI 189
E+ +G SVAQIFK EA+FR+ ES L+ LS + + VVATGGGAV+RP+NWR+M++G+
Sbjct: 137 EQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMQRLVVATGGGAVIRPVNWRYMKKGL 196
Query: 190 TVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
++ L+VPLDALA+RIA VGT S PLLD S D YT AFT LS L+++R +AYANAD VS
Sbjct: 197 SIMLDVPLDALAKRIAQVGTASRPLLDQPSGDPYTAAFTKLSMLAEQRGDAYANADVRVS 256
Query: 250 LLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
L ++AA G DV +TPT IA+E L + Q ++
Sbjct: 257 LEDIAAKQGHDDVSQLTPTDIAIEALQKIQNFV 289
>gi|222623677|gb|EEE57809.1| hypothetical protein OsJ_08387 [Oryza sativa Japonica Group]
Length = 464
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/231 (52%), Positives = 164/231 (70%), Gaps = 4/231 (1%)
Query: 52 LVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVG 111
+ P K S H+ T +S+D LLK K EV L+G+C++LVGMMGSGK+TVG
Sbjct: 58 VAPLRAKKSSGGHE----TLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVG 113
Query: 112 EILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVAT 171
+I+S+ L Y+F DSDK VE+ +G SVAQIFK EA+FR+ ES L+ LS + + VVAT
Sbjct: 114 KIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVAT 173
Query: 172 GGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALS 231
GGGAV+RP+NW++M++G++V+L+VPLDALARRIA VGT S PLLD S D YT AF+ LS
Sbjct: 174 GGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQPSGDPYTMAFSKLS 233
Query: 232 ALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
L+++R +AYANAD VSL +A+ G DV +TPT IA+E + + ++
Sbjct: 234 MLAEQRGDAYANADVRVSLEEIASKQGHDDVSKLTPTDIAIESFHKIENFV 284
>gi|357166256|ref|XP_003580651.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 298
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 161/212 (75%)
Query: 74 SLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLM 133
S D +LK K +V CL+ +C++LVGMMGSGKTTVG+I+++ L Y+F DSDK VE+ +
Sbjct: 82 SADEALILKQKAEDVLPCLNDRCVYLVGMMGSGKTTVGKIIAEVLGYSFFDSDKLVEQAV 141
Query: 134 GGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFL 193
G +SVA+IF+ EA+FR+ ES+ L+ LS + + VVATGGGAV+RP+NW +MR+G+T++L
Sbjct: 142 GISSVAEIFQVHSEAFFRDNESEVLRDLSSMHRLVVATGGGAVIRPINWSYMRKGLTIWL 201
Query: 194 NVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNL 253
+VPLDALARRIAAVGT S PLL +S D+Y KA+ L+AL ++R ++YANADA VSL N+
Sbjct: 202 DVPLDALARRIAAVGTASRPLLHQESGDTYAKAYAKLTALLEKRMDSYANADARVSLENV 261
Query: 254 AACIGLKDVLDITPTTIAMEVLVQAQKYLNSK 285
A G DV +TP+ IA+E L++ + +L K
Sbjct: 262 AFKHGHDDVNVLTPSAIAIEALLKMESFLTEK 293
>gi|326533332|dbj|BAJ93638.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 304
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 129/281 (45%), Positives = 181/281 (64%), Gaps = 8/281 (2%)
Query: 2 KALTYGSTLQFSTSVGGEIGSFNQNCKRQQTQQHFINLNPLKLKRHRTLNLVPAHVSKDS 61
+A +GS + S GGE G+ + + +P ++ +VP K S
Sbjct: 12 RAAGFGSGRRRSAMYGGESGARMVSLRVGDQVG-----SPAAVRARGAKPVVPLRAKKSS 66
Query: 62 NAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYT 121
+S+D LLK K EV L+G+C++LVGMMGSGK+TVG+IL++ L Y+
Sbjct: 67 GGG---QDNLHNSVDDALLLKRKSEEVLFQLNGRCIYLVGMMGSGKSTVGKILAEVLGYS 123
Query: 122 FADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLN 181
F DSDK VE+ +G SVAQIFK GEA+FR+ ES L+ LS + + VVATGGGAV+RP+N
Sbjct: 124 FFDSDKLVEQAVGMPSVAQIFKVHGEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVN 183
Query: 182 WRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAY 241
W+ M++G++V+L+VPL+ALARRIA VGT S PLLD S D YT AF+ LS L+++R +AY
Sbjct: 184 WKNMKKGLSVWLDVPLEALARRIAKVGTASRPLLDQPSGDPYTMAFSKLSTLAEQRGDAY 243
Query: 242 ANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
ANAD VSL +A+ +G DV +TP IA+E L + + ++
Sbjct: 244 ANADVRVSLEEIASKLGHDDVSKLTPIDIALESLHKIESFV 284
>gi|413938896|gb|AFW73447.1| shikimate kinase [Zea mays]
Length = 305
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 156/210 (74%)
Query: 73 DSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKL 132
+S+D LLK K EV L+G+C++LVGMMGSGK+TVG+I+S+ L Y+F DSDK VE+
Sbjct: 72 NSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQA 131
Query: 133 MGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVF 192
+G SVAQIFK EA+FR+ ES L+ LS + + VVATGGGAV+RP+NWR+M++G++V+
Sbjct: 132 VGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPINWRYMKRGLSVW 191
Query: 193 LNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
L+VPLDALARRIA VGT S PLLD S D Y AF+ LS L+++R +AYANAD VSL
Sbjct: 192 LDVPLDALARRIAKVGTASRPLLDQPSGDPYAMAFSKLSMLAQQRGDAYANADVRVSLEE 251
Query: 253 LAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
+A G DV +TPT IA+E L + + ++
Sbjct: 252 IACKQGHDDVSKLTPTDIAIESLHKIESFV 281
>gi|226505012|ref|NP_001152400.1| shikimate kinase [Zea mays]
gi|195655879|gb|ACG47407.1| shikimate kinase [Zea mays]
Length = 307
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 156/210 (74%)
Query: 73 DSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKL 132
+S+D LLK K EV L+G+C++LVGMMGSGK+TVG+I+S+ L Y+F DSDK VE+
Sbjct: 74 NSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQA 133
Query: 133 MGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVF 192
+G SVAQIFK EA+FR+ ES L+ LS + + VVATGGGAV+RP+NWR+M++G++V+
Sbjct: 134 VGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPINWRYMKKGLSVW 193
Query: 193 LNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
L+VPLDALARRIA VGT S PLLD S D Y AF+ LS L+++R +AYANAD VSL
Sbjct: 194 LDVPLDALARRIAKVGTASRPLLDQPSGDPYAMAFSKLSMLAQQRGDAYANADVRVSLEE 253
Query: 253 LAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
+A G DV +TPT IA+E L + + ++
Sbjct: 254 IACKQGHDDVSKLTPTDIAIESLHKIESFV 283
>gi|414585207|tpg|DAA35778.1| TPA: shikimate kinase [Zea mays]
Length = 292
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 118/223 (52%), Positives = 163/223 (73%)
Query: 63 AHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTF 122
A +G S D +L+ K ++V LDG+C++LVGMMGSGKTTVG+ILS+ L Y+F
Sbjct: 65 AQSAGTGKVHYSADDALILQQKAQDVLPYLDGRCVYLVGMMGSGKTTVGKILSEVLGYSF 124
Query: 123 ADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNW 182
DSDK VEK +G +SVA+IF+ E +FR+ ES+ L LS + + VVATGGGAV+RP+NW
Sbjct: 125 FDSDKLVEKAVGISSVAEIFQLHSETFFRDNESEVLTDLSSMHRLVVATGGGAVIRPINW 184
Query: 183 RFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYA 242
+M++G+TV+L+VPLDALARRIAAVGT S PLL +S D Y KA+ L++L ++R ++YA
Sbjct: 185 SYMKKGLTVWLDVPLDALARRIAAVGTASRPLLHQESGDPYAKAYAKLTSLFEQRMDSYA 244
Query: 243 NADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSK 285
NADA VSL ++A G DV +TP+TIA+E L++ + +L K
Sbjct: 245 NADARVSLEHIALKQGHNDVTILTPSTIAIEALLKMESFLTEK 287
>gi|189303601|gb|ACD85800.1| At2g21940 [Arabidopsis thaliana]
Length = 303
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 151/206 (73%)
Query: 80 LLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVA 139
+LK K EV L+G+ ++LVGMMGSGKTTVG+++S L YTF D D +E+ M GTSVA
Sbjct: 88 ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVA 147
Query: 140 QIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDA 199
+IF GE +FR E+ AL+KLS Q VV+TGGGAV+RP+NW++M +GI+++L+VPL+A
Sbjct: 148 EIFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEA 207
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL 259
LA RIAAVGTDS PLL +S D+Y+ AF LSA+ ER EAY NA+A VSL N+AA G
Sbjct: 208 LAHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGY 267
Query: 260 KDVLDITPTTIAMEVLVQAQKYLNSK 285
KDV D+TPT IA+E Q +L +
Sbjct: 268 KDVSDLTPTEIAIEAFEQVLSFLEKE 293
>gi|224035559|gb|ACN36855.1| unknown [Zea mays]
Length = 247
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 156/210 (74%)
Query: 73 DSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKL 132
+S+D LLK K EV L+G+C++LVGMMGSGK+TVG+I+S+ L Y+F DSDK VE+
Sbjct: 14 NSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQA 73
Query: 133 MGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVF 192
+G SVAQIFK EA+FR+ ES L+ LS + + VVATGGGAV+RP+NWR+M++G++V+
Sbjct: 74 VGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPINWRYMKRGLSVW 133
Query: 193 LNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
L+VPLDALARRIA VGT S PLLD S D Y AF+ LS L+++R +AYANAD VSL
Sbjct: 134 LDVPLDALARRIAKVGTASRPLLDQPSGDPYAMAFSKLSMLAQQRGDAYANADVRVSLEE 193
Query: 253 LAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
+A G DV +TPT IA+E L + + ++
Sbjct: 194 IACKQGHDDVSKLTPTDIAIESLHKIESFV 223
>gi|195638244|gb|ACG38590.1| shikimate kinase [Zea mays]
Length = 293
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/223 (52%), Positives = 163/223 (73%)
Query: 63 AHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTF 122
A +G S D +L+ K ++V LDG+C++LVGMMGSGKTTVG+ILS+ L Y+F
Sbjct: 66 AQSAGTGKVHYSADDALILQQKAQDVLPYLDGRCVYLVGMMGSGKTTVGKILSEVLGYSF 125
Query: 123 ADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNW 182
DSDK VEK +G +SVA+IF+ E +FR+ ES+ L LS + + VVATGGGAV+RP+NW
Sbjct: 126 FDSDKLVEKAVGISSVAEIFQLHSETFFRDNESEVLTDLSSMHRLVVATGGGAVIRPINW 185
Query: 183 RFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYA 242
+M++G+TV+L+VPLDALARRIAAVGT S PLL +S D Y KA+ L++L ++R ++YA
Sbjct: 186 SYMKKGLTVWLDVPLDALARRIAAVGTASRPLLHQESGDPYAKAYAKLTSLFEQRMDSYA 245
Query: 243 NADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSK 285
NADA VSL ++A G DV +TP+TIA+E L++ + +L K
Sbjct: 246 NADARVSLEHIALKQGHNDVTILTPSTIAIEALLKMESFLTEK 288
>gi|212275149|ref|NP_001130232.1| hypothetical protein [Zea mays]
gi|194688616|gb|ACF78392.1| unknown [Zea mays]
gi|223973151|gb|ACN30763.1| unknown [Zea mays]
gi|414585206|tpg|DAA35777.1| TPA: hypothetical protein ZEAMMB73_776202 [Zea mays]
Length = 293
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/218 (53%), Positives = 162/218 (74%)
Query: 68 SGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDK 127
+G S D +L+ K ++V LDG+C++LVGMMGSGKTTVG+ILS+ L Y+F DSDK
Sbjct: 71 TGKVHYSADDALILQQKAQDVLPYLDGRCVYLVGMMGSGKTTVGKILSEVLGYSFFDSDK 130
Query: 128 YVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ 187
VEK +G +SVA+IF+ E +FR+ ES+ L LS + + VVATGGGAV+RP+NW +M++
Sbjct: 131 LVEKAVGISSVAEIFQLHSETFFRDNESEVLTDLSSMHRLVVATGGGAVIRPINWSYMKK 190
Query: 188 GITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
G+TV+L+VPLDALARRIAAVGT S PLL +S D Y KA+ L++L ++R ++YANADA
Sbjct: 191 GLTVWLDVPLDALARRIAAVGTASRPLLHQESGDPYAKAYAKLTSLFEQRMDSYANADAR 250
Query: 248 VSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSK 285
VSL ++A G DV +TP+TIA+E L++ + +L K
Sbjct: 251 VSLEHIALKQGHNDVTILTPSTIAIEALLKMESFLTEK 288
>gi|297821397|ref|XP_002878581.1| hypothetical protein ARALYDRAFT_320039 [Arabidopsis lyrata subsp.
lyrata]
gi|297324420|gb|EFH54840.1| hypothetical protein ARALYDRAFT_320039 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/264 (47%), Positives = 177/264 (67%), Gaps = 5/264 (1%)
Query: 27 CKRQQTQQHFINLNPLKLKRHRTLNLVPAHV--SKDSNAHDVESGT---FCDSLDGKWLL 81
+R + ++ F L L+ R V + V S ++++ +E+G+ F + L K L
Sbjct: 32 SQRVKEEKRFRGLALAHLQPERRKRSVSSEVLCSDNNSSALLEAGSVYPFDEDLILKATL 91
Query: 82 KAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQI 141
+ K EV L+G+ ++LVGMMGSGKTTVG+++S L Y+F D D +E+ M GTSVA+I
Sbjct: 92 QRKAEEVKPFLNGRSMYLVGMMGSGKTTVGKLMSKVLGYSFFDCDSLIEQAMNGTSVAEI 151
Query: 142 FKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALA 201
F GE +FR E+ AL+KLS + Q VV+TGGGAV+RP+NW++M +GI+++L+VPL+ALA
Sbjct: 152 FVHHGENFFRGKETDALKKLSSMYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALA 211
Query: 202 RRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKD 261
RIAAVGT S PLL +S D+Y+ AF LS + ER EAYANA+A VSL N+AA G KD
Sbjct: 212 HRIAAVGTGSRPLLHDESGDAYSVAFKRLSTIWDERGEAYANANARVSLENIAAKRGYKD 271
Query: 262 VLDITPTTIAMEVLVQAQKYLNSK 285
V D+TPT IA+E Q +L +
Sbjct: 272 VSDLTPTEIAIEAFEQVLSFLEKE 295
>gi|414585204|tpg|DAA35775.1| TPA: hypothetical protein ZEAMMB73_776202 [Zea mays]
Length = 216
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 157/205 (76%)
Query: 81 LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQ 140
L+ K ++V LDG+C++LVGMMGSGKTTVG+ILS+ L Y+F DSDK VEK +G +SVA+
Sbjct: 7 LQQKAQDVLPYLDGRCVYLVGMMGSGKTTVGKILSEVLGYSFFDSDKLVEKAVGISSVAE 66
Query: 141 IFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDAL 200
IF+ E +FR+ ES+ L LS + + VVATGGGAV+RP+NW +M++G+TV+L+VPLDAL
Sbjct: 67 IFQLHSETFFRDNESEVLTDLSSMHRLVVATGGGAVIRPINWSYMKKGLTVWLDVPLDAL 126
Query: 201 ARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLK 260
ARRIAAVGT S PLL +S D Y KA+ L++L ++R ++YANADA VSL ++A G
Sbjct: 127 ARRIAAVGTASRPLLHQESGDPYAKAYAKLTSLFEQRMDSYANADARVSLEHIALKQGHN 186
Query: 261 DVLDITPTTIAMEVLVQAQKYLNSK 285
DV +TP+TIA+E L++ + +L K
Sbjct: 187 DVTILTPSTIAIEALLKMESFLTEK 211
>gi|30681570|ref|NP_179785.2| Shikimate kinase [Arabidopsis thaliana]
gi|145329577|ref|NP_001077938.1| Shikimate kinase [Arabidopsis thaliana]
gi|145362131|ref|NP_973507.2| Shikimate kinase [Arabidopsis thaliana]
gi|209572588|sp|Q9SJ05.2|SK1_ARATH RecName: Full=Shikimate kinase 1, chloroplastic; Short=AtSK1;
Flags: Precursor
gi|330252146|gb|AEC07240.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252147|gb|AEC07241.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252150|gb|AEC07244.1| Shikimate kinase [Arabidopsis thaliana]
Length = 303
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 151/206 (73%)
Query: 80 LLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVA 139
+LK K EV L+G+ ++LVGMMGSGKTTVG+++S L YTF D D +E+ M GTSVA
Sbjct: 88 ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVA 147
Query: 140 QIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDA 199
+IF GE +FR E+ AL+KLS Q VV+TGGGAV+RP+NW++M +GI+++L+VPL+A
Sbjct: 148 EIFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEA 207
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL 259
LA RIAAVGTDS PLL +S D+Y+ AF LSA+ ER EAY NA+A VSL N+AA G
Sbjct: 208 LAHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGY 267
Query: 260 KDVLDITPTTIAMEVLVQAQKYLNSK 285
K+V D+TPT IA+E Q +L +
Sbjct: 268 KNVSDLTPTEIAIEAFEQVLSFLEKE 293
>gi|145329216|ref|NP_001077937.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252149|gb|AEC07243.1| Shikimate kinase [Arabidopsis thaliana]
Length = 304
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 151/206 (73%)
Query: 80 LLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVA 139
+LK K EV L+G+ ++LVGMMGSGKTTVG+++S L YTF D D +E+ M GTSVA
Sbjct: 89 ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVA 148
Query: 140 QIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDA 199
+IF GE +FR E+ AL+KLS Q VV+TGGGAV+RP+NW++M +GI+++L+VPL+A
Sbjct: 149 EIFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEA 208
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL 259
LA RIAAVGTDS PLL +S D+Y+ AF LSA+ ER EAY NA+A VSL N+AA G
Sbjct: 209 LAHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGY 268
Query: 260 KDVLDITPTTIAMEVLVQAQKYLNSK 285
K+V D+TPT IA+E Q +L +
Sbjct: 269 KNVSDLTPTEIAIEAFEQVLSFLEKE 294
>gi|357138119|ref|XP_003570645.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 305
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 117/231 (50%), Positives = 163/231 (70%), Gaps = 4/231 (1%)
Query: 52 LVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVG 111
+ P K S H+ +S+D LLK K +V L+G+C++LVGMMGSGK+TVG
Sbjct: 59 VTPLRAKKSSGGHE----NLHNSVDEALLLKRKSEDVLFHLNGRCIYLVGMMGSGKSTVG 114
Query: 112 EILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVAT 171
+IL++ L Y+F DSDK VE+ +G SVAQIFK EA+FR+ E+ L+ LS + + VVAT
Sbjct: 115 KILAEVLGYSFFDSDKLVEQSVGMPSVAQIFKVHSEAFFRDNETSVLRDLSSMRRLVVAT 174
Query: 172 GGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALS 231
GGGAV+RP+NW+ M++G++V+L+VPL+ALARRIA VGT S PLLD S D YT AF+ LS
Sbjct: 175 GGGAVIRPVNWKNMKKGLSVWLDVPLEALARRIAKVGTASRPLLDQPSGDPYTMAFSKLS 234
Query: 232 ALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
L+++R +AYANAD VSL +A+ +G DV +TP IA+E L + + ++
Sbjct: 235 TLAEQRGDAYANADVRVSLEEIASKLGHDDVSKLTPIDIALESLYKIESFV 285
>gi|4417286|gb|AAD20411.1| putative shikimate kinase precursor [Arabidopsis thaliana]
Length = 292
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 148/195 (75%)
Query: 80 LLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVA 139
+LK K EV L+G+ ++LVGMMGSGKTTVG+++S L YTF D D +E+ M GTSVA
Sbjct: 88 ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVA 147
Query: 140 QIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDA 199
+IF GE +FR E+ AL+KLS Q VV+TGGGAV+RP+NW++M +GI+++L+VPL+A
Sbjct: 148 EIFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEA 207
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL 259
LA RIAAVGTDS PLL +S D+Y+ AF LSA+ ER EAY NA+A VSL N+AA G
Sbjct: 208 LAHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGY 267
Query: 260 KDVLDITPTTIAMEV 274
K+V D+TPT IA+EV
Sbjct: 268 KNVSDLTPTEIAIEV 282
>gi|39104605|dbj|BAC43483.2| putative shikimate kinase precursor [Arabidopsis thaliana]
Length = 303
Score = 229 bits (584), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 151/206 (73%)
Query: 80 LLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVA 139
+LK K EV L+G+ ++LVGMMGSGKTTVG+++S L YTF D D +E+ M GTSVA
Sbjct: 88 ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVA 147
Query: 140 QIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDA 199
+IF GE +FR E+ AL+KLS Q VV+TGGGAV+RP+NW++M +GI+++L+VPL+A
Sbjct: 148 EIFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEA 207
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL 259
LA RIAAVGTDS PLL +S ++Y+ AF LSA+ ER EAY NA+A VSL N+AA G
Sbjct: 208 LAHRIAAVGTDSRPLLHDESGNAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGY 267
Query: 260 KDVLDITPTTIAMEVLVQAQKYLNSK 285
K+V D+TPT IA+E Q +L +
Sbjct: 268 KNVSDLTPTEIAIEAFEQVLSFLEKE 293
>gi|224096310|ref|XP_002310602.1| shikimate kinase [Populus trichocarpa]
gi|222853505|gb|EEE91052.1| shikimate kinase [Populus trichocarpa]
Length = 294
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/259 (48%), Positives = 177/259 (68%), Gaps = 4/259 (1%)
Query: 23 FNQNCKRQQTQQHFIN--LNPLKLK-RHRTLNLVPAHVSKDSNAHDVESGTFCDSL-DGK 78
F+ K Q+ Q F++ P++ + RHR + + +S +ES + D +
Sbjct: 31 FSGRFKEQKRLQVFVSAQFRPVRDENRHRQASFEVSCSCNNSQVSTLESESLQDLFGEEA 90
Query: 79 WLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSV 138
+LK K +E+ L+G+C++LVGMMGSGKTTVG+ILS ++ Y+F D DK VE+ +G SV
Sbjct: 91 LILKNKSQEIEPYLNGRCIYLVGMMGSGKTTVGKILSRSIRYSFCDCDKLVEQDVGVPSV 150
Query: 139 AQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLD 198
A+IF+ GE +FR+ E++AL+KLS+ + VV+TGGGAV+R NW +MR+GI+V+L+VPL+
Sbjct: 151 AEIFEIYGEDFFRDKETEALEKLSIEHRFVVSTGGGAVIRDENWIYMRKGISVWLDVPLE 210
Query: 199 ALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIG 258
LA+RIAAVGT S PLLD +S D+Y AF LS L ++R +AY NA A VSL N+AA +G
Sbjct: 211 ELAQRIAAVGTKSRPLLDNESGDAYNTAFRRLSTLFEKRHKAYENAKARVSLENIAAKLG 270
Query: 259 LKDVLDITPTTIAMEVLVQ 277
KDV ITP IA+E L Q
Sbjct: 271 YKDVSSITPAMIAIEALEQ 289
>gi|30692396|ref|NP_195664.2| shikimate kinase 2 [Arabidopsis thaliana]
gi|42573237|ref|NP_974715.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|75151384|sp|Q8GY88.1|SK2_ARATH RecName: Full=Shikimate kinase 2, chloroplastic; Short=AtSK2;
Flags: Precursor
gi|26450651|dbj|BAC42436.1| putative shikimate kinase [Arabidopsis thaliana]
gi|28950863|gb|AAO63355.1| At4g39540 [Arabidopsis thaliana]
gi|332661683|gb|AEE87083.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|332661684|gb|AEE87084.1| shikimate kinase 2 [Arabidopsis thaliana]
Length = 300
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 127/275 (46%), Positives = 179/275 (65%), Gaps = 11/275 (4%)
Query: 17 GGEIGSFNQNCKRQQTQQHF--INLNPLKLKRHRTLNLVPAHVSKDSNAHDVESGTFCDS 74
G GS N +R + + F + L K + HR + VS +++ +E+G+ S
Sbjct: 22 GKPRGSLRYNTQRIKEDKRFRVVALTLDKRRDHRLRS-----VSDKNSSALLETGSLLHS 76
Query: 75 L--DGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKL 132
+ + +LK K EV L+G+ ++LVGMMGSGKTTVG+I++ +L YTF D D +E+
Sbjct: 77 PFDEEQQILKKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARSLGYTFFDCDTLIEQA 136
Query: 133 MGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQ-VVATGGGAVVRPLNWRFMRQGITV 191
M GTSVA+IF+ GE+ FRE E++AL+KLSL+ Q VV+TGGGAV+RP+NW++M +GI++
Sbjct: 137 MKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVIRPINWKYMHKGISI 196
Query: 192 FLNVPLDALARRIAAVGTDSFPLL-DYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
+L+VPL+ALA RIAAVGT S PLL D +S D+YT A LS + R EAY A A VSL
Sbjct: 197 WLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWDARGEAYTKASARVSL 256
Query: 251 LNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSK 285
N+ +G + V D+TP IA+E Q Q YL +
Sbjct: 257 ENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEKE 291
>gi|350538979|ref|NP_001234112.1| shikimate kinase, chloroplastic [Solanum lycopersicum]
gi|114200|sp|Q00497.1|AROK_SOLLC RecName: Full=Shikimate kinase, chloroplastic; Flags: Precursor
gi|19349|emb|CAA45121.1| shikimate kinase precursor [Solanum lycopersicum]
Length = 300
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 157/228 (68%), Gaps = 1/228 (0%)
Query: 59 KDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDAL 118
++ A +ESG F S+D LK K EV LDG+C++LVGMMG GKTTVG IL++ L
Sbjct: 69 QNVQASVLESGCFSASIDEIETLKNKAEEVEEYLDGRCVYLVGMMGCGKTTVGRILAETL 128
Query: 119 DYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVR 178
Y+F D D+ +E+ +GG +VA+IF+ GE++FR+ E++ L KLSL+ + VV+TGGGAVVR
Sbjct: 129 GYSFFDCDRLIEQAVGGITVAEIFELRGESFFRDNETEVLHKLSLMHRLVVSTGGGAVVR 188
Query: 179 PLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERS 238
P+NWR M +GI+V+L+VPL+ALA+RI GT S PLL +S D Y L+ L + R
Sbjct: 189 PINWRHMHKGISVWLDVPLEALAKRITTEGTKSRPLLHEESGDVYDTTLKRLTTLMETRG 248
Query: 239 EAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSKR 286
E YANA A VSL N+A KDV ITP I +EVL+Q + +L +++
Sbjct: 249 ENYANASARVSLENIAL-KREKDVCHITPAEITLEVLIQIENFLKTQK 295
>gi|297603441|ref|NP_001054037.2| Os04g0640600 [Oryza sativa Japonica Group]
gi|75140480|sp|Q7X7H9.2|SK3_ORYSJ RecName: Full=Shikimate kinase 3, chloroplastic; Short=OsSK3;
Flags: Precursor
gi|38344899|emb|CAE02970.2| OSJNBb0079B02.2 [Oryza sativa Japonica Group]
gi|56805581|dbj|BAD83414.1| shikimate kinase 3 [Oryza sativa Japonica Group]
gi|116310881|emb|CAH67822.1| OSIGBa0138H21-OSIGBa0138E01.13 [Oryza sativa Indica Group]
gi|222629650|gb|EEE61782.1| hypothetical protein OsJ_16353 [Oryza sativa Japonica Group]
gi|255675822|dbj|BAF15951.2| Os04g0640600 [Oryza sativa Japonica Group]
Length = 287
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 158/212 (74%)
Query: 74 SLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLM 133
S D +LK K +V L+ +C++LVGMMGSGKTTVG+IL++ L Y+F DSDK VEK +
Sbjct: 71 SADEALVLKQKAEDVVPYLNDRCIYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAV 130
Query: 134 GGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFL 193
G +SVA+IF+ EA+FR+ ES+ L+ LS + + VVATGGGAV+RP+NW +M++G T++L
Sbjct: 131 GISSVAEIFQLHSEAFFRDNESEVLRDLSSMHRLVVATGGGAVIRPINWSYMKKGSTIWL 190
Query: 194 NVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNL 253
+VPLDALARRIAAVGT S PLL +S D Y KA+ L+AL ++R ++YANADA VSL ++
Sbjct: 191 DVPLDALARRIAAVGTASRPLLHQESGDPYAKAYAKLTALFEQRMDSYANADARVSLEHI 250
Query: 254 AACIGLKDVLDITPTTIAMEVLVQAQKYLNSK 285
A G +V +TP+ IA+E L++ + +L K
Sbjct: 251 AVKQGHSNVTTLTPSAIAIEALLKMESFLTEK 282
>gi|116787038|gb|ABK24350.1| unknown [Picea sitchensis]
Length = 318
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 153/207 (73%)
Query: 80 LLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVA 139
+LK K E+ L G+C++LVGMMGSGKTTVG+ILS+ L Y F DSD+ VE+ GG SVA
Sbjct: 105 ILKKKAEEIIPHLKGKCIYLVGMMGSGKTTVGKILSEVLGYYFFDSDQLVEEASGGASVA 164
Query: 140 QIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDA 199
QIFKE E FR+ ES+ L++LS + + V+ATGGGAVVRP NW +MRQGITV+L+VPL+A
Sbjct: 165 QIFKERNEQGFRDSESEVLKQLSTMYRLVIATGGGAVVRPQNWNYMRQGITVWLDVPLEA 224
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL 259
LA R+ AVGT+S PLL S D Y++A T L+ L ++R+EAY ++D VSL ++A +G
Sbjct: 225 LAARVVAVGTESRPLLGQASDDCYSQALTRLTKLYEDRAEAYKSSDVKVSLRDIAVELGN 284
Query: 260 KDVLDITPTTIAMEVLVQAQKYLNSKR 286
KDV ++PT IA+E L++ K + ++
Sbjct: 285 KDVARLSPTVIAIEALMEMSKIMTYRK 311
>gi|326530582|dbj|BAJ97717.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 301
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/212 (52%), Positives = 158/212 (74%)
Query: 74 SLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLM 133
S D +LK K +V L+ +C++LVGMMGSGKTTVG+I+++ L Y+F DSDK VE+ +
Sbjct: 85 SADEALVLKQKAEDVLPYLNDRCVYLVGMMGSGKTTVGKIIAEVLGYSFFDSDKLVEQSV 144
Query: 134 GGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFL 193
G SVA+IF+ EA+FR+ ES+ L+ LS + + +VATGGGAV+RP+NW +MR+G+T++L
Sbjct: 145 GIPSVAEIFQVHSEAFFRDNESEVLRDLSSMHRLIVATGGGAVIRPINWSYMRKGLTIWL 204
Query: 194 NVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNL 253
+VP+DALARRIAAVGT S PLL ++S D Y KA+ L+ L ++R ++YANADA VSL N+
Sbjct: 205 DVPVDALARRIAAVGTASRPLLHHESGDPYAKAYAKLATLFEQRMDSYANADARVSLENI 264
Query: 254 AACIGLKDVLDITPTTIAMEVLVQAQKYLNSK 285
A G DV +TP+ IA+E L++ + +L K
Sbjct: 265 AFRQGHNDVNVLTPSAIAIEALLKMESFLTEK 296
>gi|297797940|ref|XP_002866854.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297312690|gb|EFH43113.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 299
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 152/208 (73%), Gaps = 2/208 (0%)
Query: 80 LLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVA 139
LL+ K EV L+G+ ++LVGMMGSGKTTVG+I++ AL YTF D D +E+ M GTSVA
Sbjct: 83 LLQKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARALGYTFFDCDTLIEQAMNGTSVA 142
Query: 140 QIFKESGEAYFREYESKALQKLSLVPQQ-VVATGGGAVVRPLNWRFMRQGITVFLNVPLD 198
+IF+ GE+ FRE E++AL+KLSL+ Q VV+TGGGAV+RP+NW++M +GI+++L+VPL
Sbjct: 143 EIFEHFGESVFREKETEALKKLSLMYNQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLK 202
Query: 199 ALARRIAAVGTDSFPLL-DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACI 257
ALA RIAAVGT S PLL D +S D+YT A LS + R EAY NA A VSL ++ +
Sbjct: 203 ALAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWDARGEAYTNASARVSLESMTLKL 262
Query: 258 GLKDVLDITPTTIAMEVLVQAQKYLNSK 285
G + V D+TPT IAME Q + YL+ +
Sbjct: 263 GYRSVSDLTPTEIAMEAFEQVRSYLDKE 290
>gi|340707718|pdb|3NWJ|A Chain A, Crystal Structure Of Shikimate Kinase From Arabidopsis
Thaliana (Atsk2)
gi|340707719|pdb|3NWJ|B Chain B, Crystal Structure Of Shikimate Kinase From Arabidopsis
Thaliana (Atsk2)
Length = 250
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 163/233 (69%), Gaps = 4/233 (1%)
Query: 57 VSKDSNAHDVESGTFCDSL--DGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEIL 114
VS +++ +E+G+ S + + +LK K EV L+G+ ++LVGMMGSGKTTVG+I+
Sbjct: 9 VSDKNSSALLETGSLLHSPFDEEQQILKKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIM 68
Query: 115 SDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQ-VVATGG 173
+ +L YTF D D +E+ M GTSVA+IF+ GE+ FRE E++AL+KLSL+ Q VV+TGG
Sbjct: 69 ARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGG 128
Query: 174 GAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLL-DYDSADSYTKAFTALSA 232
GAV+RP+NW++M +GI+++L+VPL+ALA RIAAVGT S PLL D +S D+YT A LS
Sbjct: 129 GAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAALNRLST 188
Query: 233 LSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSK 285
+ R EAY A A VSL N+ +G + V D+TP IA+E Q Q YL +
Sbjct: 189 IWDARGEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEKE 241
>gi|334187330|ref|NP_001190969.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|332661685|gb|AEE87085.1| shikimate kinase 2 [Arabidopsis thaliana]
Length = 308
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/283 (44%), Positives = 179/283 (63%), Gaps = 19/283 (6%)
Query: 17 GGEIGSFNQNCKRQQTQQHF--INLNPLKLKRHRTLNLVPAHVSKDSNAHDVESGTFCDS 74
G GS N +R + + F + L K + HR + VS +++ +E+G+ S
Sbjct: 22 GKPRGSLRYNTQRIKEDKRFRVVALTLDKRRDHRLRS-----VSDKNSSALLETGSLLHS 76
Query: 75 L--DGKWLLKAKGREVASCLDGQCLFLV--------GMMGSGKTTVGEILSDALDYTFAD 124
+ + +LK K EV L+G+ ++L+ GMMGSGKTTVG+I++ +L YTF D
Sbjct: 77 PFDEEQQILKKKAEEVKPYLNGRSMYLLNSFLVNALGMMGSGKTTVGKIMARSLGYTFFD 136
Query: 125 SDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQ-VVATGGGAVVRPLNWR 183
D +E+ M GTSVA+IF+ GE+ FRE E++AL+KLSL+ Q VV+TGGGAV+RP+NW+
Sbjct: 137 CDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVIRPINWK 196
Query: 184 FMRQGITVFLNVPLDALARRIAAVGTDSFPLL-DYDSADSYTKAFTALSALSKERSEAYA 242
+M +GI+++L+VPL+ALA RIAAVGT S PLL D +S D+YT A LS + R EAY
Sbjct: 197 YMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWDARGEAYT 256
Query: 243 NADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSK 285
A A VSL N+ +G + V D+TP IA+E Q Q YL +
Sbjct: 257 KASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEKE 299
>gi|302770076|ref|XP_002968457.1| hypothetical protein SELMODRAFT_169767 [Selaginella moellendorffii]
gi|300164101|gb|EFJ30711.1| hypothetical protein SELMODRAFT_169767 [Selaginella moellendorffii]
Length = 300
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/259 (47%), Positives = 171/259 (66%), Gaps = 12/259 (4%)
Query: 33 QQHFINL----NPLKLKRHRTLNLVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREV 88
+Q INL NP ++ HR V S+++N ES T D+ LK+KG+E+
Sbjct: 39 RQSRINLVSCRNPSQI-HHRARRSVVLLCSQNANVAATES-TSVDTA-----LKSKGKEL 91
Query: 89 ASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEA 148
A L G CLFL+GMMGSGK+TVG+ LSDAL Y F DSDK VE+ GG SVAQIFK+S E
Sbjct: 92 ARDLKGTCLFLIGMMGSGKSTVGKHLSDALGYYFFDSDKLVEQAAGGASVAQIFKQSNEE 151
Query: 149 YFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVG 208
FR+ ES+ L +LS + + VVATGGGAVVRP NW +MR GITV+L+VPLDALA+R+ A G
Sbjct: 152 GFRDAESEVLSQLSGMYRLVVATGGGAVVRPQNWGYMRHGITVYLDVPLDALAKRVVAAG 211
Query: 209 TDSFPLLDYDSAD-SYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITP 267
T+ PLL + ++ + L+ L +ER AY NAD +V L +A + KD+ ++TP
Sbjct: 212 TEKRPLLGEPQREFAHEQTLARLTKLYEERGMAYKNADVSVCLKMIANEMNAKDICELTP 271
Query: 268 TTIAMEVLVQAQKYLNSKR 286
+ IA++++ + Q+ + S++
Sbjct: 272 SIIALKIMERTQELIRSQK 290
>gi|302774428|ref|XP_002970631.1| hypothetical protein SELMODRAFT_147242 [Selaginella moellendorffii]
gi|300162147|gb|EFJ28761.1| hypothetical protein SELMODRAFT_147242 [Selaginella moellendorffii]
Length = 300
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/259 (47%), Positives = 171/259 (66%), Gaps = 12/259 (4%)
Query: 33 QQHFINL----NPLKLKRHRTLNLVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREV 88
+Q INL NP ++ HR V S+++N ES T D+ LK+KG+E+
Sbjct: 39 RQSRINLVSCRNPSQI-HHRARRPVVLLCSQNANVAATES-TSVDTA-----LKSKGKEL 91
Query: 89 ASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEA 148
A L G CLFL+GMMGSGK+TVG+ LSDAL Y F DSDK VE+ GG SVAQIFK+S E
Sbjct: 92 ARDLKGTCLFLIGMMGSGKSTVGKHLSDALGYYFFDSDKLVEQAAGGASVAQIFKQSNEE 151
Query: 149 YFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVG 208
FR+ ES+ L +LS + + VVATGGGAVVRP NW +MR GITV+L+VPLDALA+R+ A G
Sbjct: 152 GFRDAESEVLSQLSGMYRLVVATGGGAVVRPQNWGYMRHGITVYLDVPLDALAKRVVAAG 211
Query: 209 TDSFPLLDYDSAD-SYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITP 267
T+ PLL + ++ + L+ L +ER AY NAD +V L +A + KD+ ++TP
Sbjct: 212 TEKRPLLGEPQREFAHEQTLARLTKLYEERGMAYKNADVSVCLKMIANEMNAKDICELTP 271
Query: 268 TTIAMEVLVQAQKYLNSKR 286
+ IA++++ + Q+ + S++
Sbjct: 272 SIIAVKIMERTQELIRSQK 290
>gi|413938895|gb|AFW73446.1| hypothetical protein ZEAMMB73_578634 [Zea mays]
Length = 257
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 139/187 (74%), Gaps = 4/187 (2%)
Query: 59 KDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDAL 118
K S H+ +S+D LLK K EV L+G+C++LVGMMGSGK+TVG+I+S+ L
Sbjct: 62 KSSGGHE----NSHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVL 117
Query: 119 DYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVR 178
Y+F DSDK VE+ +G SVAQIFK EA+FR+ ES L+ LS + + VVATGGGAV+R
Sbjct: 118 GYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIR 177
Query: 179 PLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERS 238
P+NWR+M++G++V+L+VPLDALARRIA VGT S PLLD S D Y AF+ LS L+++R
Sbjct: 178 PINWRYMKRGLSVWLDVPLDALARRIAKVGTASRPLLDQPSGDPYAMAFSKLSMLAQQRG 237
Query: 239 EAYANAD 245
+AYANAD
Sbjct: 238 DAYANAD 244
>gi|218195681|gb|EEC78108.1| hypothetical protein OsI_17614 [Oryza sativa Indica Group]
Length = 253
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/185 (55%), Positives = 142/185 (76%)
Query: 101 GMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQK 160
GMMGSGKTTVG+IL++ L Y+F DSDK VEK +G +SVA+IF+ EA+FR+ ES+ L+
Sbjct: 64 GMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFRDNESEVLRD 123
Query: 161 LSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSA 220
LS + + VVATGGGAV+RP+NW +M++G T++L+VPLDALARRIAAVGT S PLL +S
Sbjct: 124 LSSMHRLVVATGGGAVIRPINWSYMKKGSTIWLDVPLDALARRIAAVGTASRPLLHQESG 183
Query: 221 DSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQK 280
D Y KA+ L+AL ++R ++YANADA VSL ++A G +V +TP+ IA+E L++ +
Sbjct: 184 DPYAKAYAKLTALFEQRMDSYANADARVSLEHIAVKQGHSNVTTLTPSAIAIEALLKMES 243
Query: 281 YLNSK 285
+L K
Sbjct: 244 FLTEK 248
>gi|363807180|ref|NP_001242093.1| uncharacterized protein LOC100807736 [Glycine max]
gi|255642221|gb|ACU21375.1| unknown [Glycine max]
Length = 253
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 151/206 (73%), Gaps = 1/206 (0%)
Query: 30 QQTQQHFINLNPLKLKRHRTLNLVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVA 89
++ Q + ++P+ ++R RT L + + +A +ESG+ LD + +LK + +E
Sbjct: 35 REPQSLRVFVSPMMMRR-RTTALEVSSSYDNISASILESGSVHAPLDEELILKNRSQETQ 93
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
L+G+C++LVGMMGSGKTTVG+I+S L Y+F DSD VE+ +GG SV IF++ GE +
Sbjct: 94 PYLNGRCIYLVGMMGSGKTTVGKIMSQVLGYSFCDSDALVEEEVGGNSVVDIFEQHGETF 153
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FR E++ L KLSL+ + V++TGGGAV+RP+NW++M +G++V+L+VP++ALA+RIAAVGT
Sbjct: 154 FRNKETEVLHKLSLLHRLVISTGGGAVMRPINWKYMHKGVSVWLDVPVEALAQRIAAVGT 213
Query: 210 DSFPLLDYDSADSYTKAFTALSALSK 235
+S PLL+Y++ D YT+AF LSA+ K
Sbjct: 214 NSRPLLNYEAGDPYTRAFMRLSAILK 239
>gi|413924548|gb|AFW64480.1| hypothetical protein ZEAMMB73_201621 [Zea mays]
Length = 205
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/181 (56%), Positives = 137/181 (75%)
Query: 102 MMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKL 161
MMGSGK+TVG+I+S+ L Y+F DSDK VE+ +G SVAQIFK EA+FR+ ES L+ L
Sbjct: 1 MMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDL 60
Query: 162 SLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSAD 221
S + + VVATGGGAV+RP+NW++M++G++V+L+VPLDALARRIA VGT S PLLD S D
Sbjct: 61 SSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQPSGD 120
Query: 222 SYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKY 281
YT AF+ LS L+++R +AYANAD VSL +A+ G DV + PT IA+E L + + +
Sbjct: 121 PYTMAFSKLSMLAEQRGDAYANADVRVSLEEIASKQGHGDVSKLMPTDIAIESLHKIESF 180
Query: 282 L 282
+
Sbjct: 181 V 181
>gi|145329214|ref|NP_001077936.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252148|gb|AEC07242.1| Shikimate kinase [Arabidopsis thaliana]
Length = 276
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 128/169 (75%)
Query: 80 LLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVA 139
+LK K EV L+G+ ++LVGMMGSGKTTVG+++S L YTF D D +E+ M GTSVA
Sbjct: 88 ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVA 147
Query: 140 QIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDA 199
+IF GE +FR E+ AL+KLS Q VV+TGGGAV+RP+NW++M +GI+++L+VPL+A
Sbjct: 148 EIFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEA 207
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LA RIAAVGTDS PLL +S D+Y+ AF LSA+ ER EAY NA+A V
Sbjct: 208 LAHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNANARV 256
>gi|374256057|gb|AEZ00890.1| putative shikimate kinase 1 protein, partial [Elaeis guineensis]
Length = 164
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/150 (62%), Positives = 119/150 (79%)
Query: 76 DGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGG 135
D +LK K ++ S L+G C++LVGMMGSGKTTVG+ILS+ L Y+F DSDK VE+ +G
Sbjct: 1 DEALILKRKAEDITSSLNGHCIYLVGMMGSGKTTVGKILSEVLGYSFIDSDKLVEQAVGV 60
Query: 136 TSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNV 195
SVAQIFKE EA+FR+ ESK L+ LS + + VVATGGGAV+RP+NW++M+QG+TV+L+V
Sbjct: 61 PSVAQIFKEYSEAFFRDNESKVLRDLSTMHRLVVATGGGAVIRPVNWKYMKQGMTVWLDV 120
Query: 196 PLDALARRIAAVGTDSFPLLDYDSADSYTK 225
PL+ALARRIAAVGT S PLL + D YTK
Sbjct: 121 PLEALARRIAAVGTASRPLLHQEPGDPYTK 150
>gi|255583009|ref|XP_002532273.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
gi|223528033|gb|EEF30113.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
Length = 313
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/215 (47%), Positives = 147/215 (68%), Gaps = 3/215 (1%)
Query: 22 SFNQNCKRQQTQQHFIN--LNPLKLK-RHRTLNLVPAHVSKDSNAHDVESGTFCDSLDGK 78
SF++ K +Q ++ P K RH +++ + K+S +ESG+ S D
Sbjct: 31 SFSRKSKEKQRLHVVVSTQFRPTSNKYRHASISSEVSCSYKNSPVSVLESGSLHASSDES 90
Query: 79 WLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSV 138
+LK K + V L G+C++LVGMMGSGKTTVG++LS L Y+F D D +E+ + GTSV
Sbjct: 91 LILKNKSQVVEPYLSGRCIYLVGMMGSGKTTVGKVLSQVLGYSFCDCDSLIEQDVDGTSV 150
Query: 139 AQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLD 198
A+IFK GE +FR E++ L+ LS++ Q VV+TGGGAV+RP+NW +M++GI+V+L+VPL+
Sbjct: 151 AEIFKLYGEGFFRMKETEVLKNLSMMHQIVVSTGGGAVIRPINWEYMQKGISVWLDVPLE 210
Query: 199 ALARRIAAVGTDSFPLLDYDSADSYTKAFTALSAL 233
ALA+RIAAVGTDS PLL ++S D+YTK T S L
Sbjct: 211 ALAQRIAAVGTDSRPLLHHESGDAYTKVGTLSSFL 245
>gi|262181535|gb|ACY29658.1| shikimate kinase 02 [Vitis vinifera]
Length = 228
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 136/199 (68%), Gaps = 1/199 (0%)
Query: 23 FNQNCKRQQTQQHFINLNPLKLKR-HRTLNLVPAHVSKDSNAHDVESGTFCDSLDGKWLL 81
F+Q + Q + P + + + L + ++ A +ESG+F SLD +L
Sbjct: 30 FSQKLREQHGHPISYHFQPRRTSNWQKHVALEASGSCRNFPAPILESGSFPPSLDEALIL 89
Query: 82 KAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQI 141
K K +E+ +DG+C++LVGMMGSGKTT+G+IL + L Y+F DSD VE + GTSVA+I
Sbjct: 90 KNKSQEILPYIDGRCVYLVGMMGSGKTTIGKILPEVLGYSFCDSDTLVELAVKGTSVAEI 149
Query: 142 FKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALA 201
F GE +FR ES+ LQKLSL VV+TGGGAV+RP+NW++M +GI+V+L+VPL+ALA
Sbjct: 150 FNLYGEGFFRNKESETLQKLSLTHHMVVSTGGGAVIRPINWKYMAKGISVWLDVPLEALA 209
Query: 202 RRIAAVGTDSFPLLDYDSA 220
RRI+AVGT+S PLL ++S
Sbjct: 210 RRISAVGTNSRPLLHHESG 228
>gi|255594862|ref|XP_002536182.1| conserved hypothetical protein [Ricinus communis]
gi|223520575|gb|EEF26201.1| conserved hypothetical protein [Ricinus communis]
Length = 180
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/128 (71%), Positives = 110/128 (85%)
Query: 125 SDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRF 184
SD+YVE+ GG SV+ IF++ GE YFR+ ES+ALQKLS++P+QVVATGGG+VVRP+NW++
Sbjct: 19 SDEYVEQTAGGNSVSHIFQQYGEDYFRDIESEALQKLSIIPRQVVATGGGSVVRPINWKY 78
Query: 185 MRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANA 244
MRQGITVFL+VPLDALARRIAAVGTDS PLL DS D YTKAF L LSK+R EAY++A
Sbjct: 79 MRQGITVFLDVPLDALARRIAAVGTDSRPLLHLDSGDPYTKAFMGLFTLSKKRVEAYSDA 138
Query: 245 DATVSLLN 252
D TVSLL+
Sbjct: 139 DVTVSLLD 146
>gi|302773918|ref|XP_002970376.1| hypothetical protein SELMODRAFT_411357 [Selaginella moellendorffii]
gi|300161892|gb|EFJ28506.1| hypothetical protein SELMODRAFT_411357 [Selaginella moellendorffii]
Length = 237
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 139/202 (68%), Gaps = 7/202 (3%)
Query: 81 LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQ 140
L KGREVA L G CLFLVGMMG GK+TV + +S+AL Y F DSDK VEK +G T VA+
Sbjct: 32 LAIKGREVAGDLSGTCLFLVGMMGCGKSTVAKDISEALSYEFQDSDKLVEKAVGAT-VAK 90
Query: 141 IFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDAL 200
IF +S E FR ES+AL +LS VVATGGGAVVR NWR+++QGIT++L+VP++AL
Sbjct: 91 IFSDSSEEKFRAAESEALNQLSETSNVVVATGGGAVVRDENWRYLKQGITIYLDVPVEAL 150
Query: 201 ARRIAAVGTDSFPLL-----DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAA 255
A+R+ A G + PLL D +++ +A LS + +ER++AY AD +S+ +A+
Sbjct: 151 AQRVVAAGLEKRPLLVASGPDNSPGNAHEQALARLSKVYEERNKAYERADLKISVAKIAS 210
Query: 256 CIGLKDVLDITPTTIAMEVLVQ 277
+G +D+ ++ P+ IA++ V+
Sbjct: 211 ELG-RDLNELPPSMIALKASVR 231
>gi|302769450|ref|XP_002968144.1| hypothetical protein SELMODRAFT_409286 [Selaginella moellendorffii]
gi|300163788|gb|EFJ30398.1| hypothetical protein SELMODRAFT_409286 [Selaginella moellendorffii]
Length = 237
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 138/202 (68%), Gaps = 7/202 (3%)
Query: 81 LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQ 140
L KGREVA L G CLFLVGMMG GK+TV + +S+AL Y F DSDK VEK +G T VA+
Sbjct: 32 LAIKGREVAGDLSGTCLFLVGMMGCGKSTVAKDISEALSYEFQDSDKLVEKAIGAT-VAK 90
Query: 141 IFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDAL 200
IF +S E FR ES+AL +LS VVATGGGAVVR NWR+++QGIT++L+VP++AL
Sbjct: 91 IFSDSSEDKFRAAESEALNQLSETSNVVVATGGGAVVRDENWRYLKQGITIYLDVPVEAL 150
Query: 201 ARRIAAVGTDSFPLL-----DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAA 255
A+R+ A G + PLL D +++ +A LS + ER++AY AD +S+ +A+
Sbjct: 151 AQRVVAAGLEKRPLLVASGPDNSPGNAHEQALARLSKVYAERNKAYERADLKISVAKIAS 210
Query: 256 CIGLKDVLDITPTTIAMEVLVQ 277
+G +D+ ++ P+ IA++ V+
Sbjct: 211 ELG-RDLNELPPSMIALKASVR 231
>gi|413924547|gb|AFW64479.1| hypothetical protein ZEAMMB73_201621 [Zea mays]
Length = 185
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 117/158 (74%)
Query: 125 SDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRF 184
SDK VE+ +G SVAQIFK EA+FR+ ES L+ LS + + VVATGGGAV+RP+NW++
Sbjct: 4 SDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNWKY 63
Query: 185 MRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANA 244
M++G++V+L+VPLDALARRIA VGT S PLLD S D YT AF+ LS L+++R +AYANA
Sbjct: 64 MKKGLSVWLDVPLDALARRIAKVGTASRPLLDQPSGDPYTMAFSKLSMLAEQRGDAYANA 123
Query: 245 DATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
D VSL +A+ G DV + PT IA+E L + + ++
Sbjct: 124 DVRVSLEEIASKQGHGDVSKLMPTDIAIESLHKIESFV 161
>gi|5042170|emb|CAB44689.1| shikimate kinase-like protein [Arabidopsis thaliana]
gi|7270938|emb|CAB80617.1| shikimate kinase-like protein [Arabidopsis thaliana]
Length = 305
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 117/169 (69%), Gaps = 2/169 (1%)
Query: 119 DYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVV-ATGGGAVV 177
DY D +E+ M GTSVA+IF+ GE+ FRE E++AL+KLSL+ QVV +TGGGAV+
Sbjct: 128 DYGKIACDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVI 187
Query: 178 RPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLL-DYDSADSYTKAFTALSALSKE 236
RP+NW++M +GI+++L+VPL+ALA RIAAVGT S PLL D +S D+YT A LS +
Sbjct: 188 RPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWDA 247
Query: 237 RSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSK 285
R EAY A A VSL N+ +G + V D+TP IA+E Q Q YL +
Sbjct: 248 RGEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEKE 296
>gi|46849856|gb|AAT02351.1| shikimate kinase, partial [Cucumis sativus]
Length = 157
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/148 (54%), Positives = 113/148 (76%)
Query: 135 GTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLN 194
G SVA++FK GE +FRE E++AL+KLSL+ Q V++TGGGAV R +NW++M +GI+V+L+
Sbjct: 1 GISVAEVFKVYGEDFFRERETEALRKLSLMRQFVISTGGGAVTRSINWKYMHKGISVWLD 60
Query: 195 VPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLA 254
VPL+AL +RI+AVGT+S PLL +DS D+Y+K LS L +ER EAYANA+ VS +A
Sbjct: 61 VPLEALVKRISAVGTNSRPLLHHDSNDAYSKTLVRLSTLLEERGEAYANAEVKVSCEKIA 120
Query: 255 ACIGLKDVLDITPTTIAMEVLVQAQKYL 282
A +G KDV ++TP IA+E L + + +L
Sbjct: 121 AKLGTKDVSNVTPMAIAIEALEEIETFL 148
>gi|168063482|ref|XP_001783700.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664765|gb|EDQ51472.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 168
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 105/159 (66%), Gaps = 1/159 (0%)
Query: 86 REVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKES 145
+EVA + + +FLVGMMG GK+TVG+IL+DAL Y + DSD +EK+ GG +V +IF+
Sbjct: 1 QEVARLNNNKNIFLVGMMGCGKSTVGKILADALGYKYRDSDDEIEKIEGGLAVKEIFRLK 60
Query: 146 GEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIA 205
GE FR+ ES AL+KL VVATGGGAV+ NW ++ GITV+L+VP+ LA+R+
Sbjct: 61 GETQFRKTESDALRKLCEKKDLVVATGGGAVIYDANWEYLGNGITVWLDVPVKVLAKRVT 120
Query: 206 AVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANA 244
AVGT S PLL AD + LS L KER Y+ A
Sbjct: 121 AVGTGSRPLLGDGCAD-FESVLLKLSTLMKERKAQYSKA 158
>gi|115448691|ref|NP_001048125.1| Os02g0749300 [Oryza sativa Japonica Group]
gi|113537656|dbj|BAF10039.1| Os02g0749300 [Oryza sativa Japonica Group]
Length = 195
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 98/138 (71%), Gaps = 4/138 (2%)
Query: 52 LVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVG 111
+ P K S H+ T +S+D LLK K EV L+G+C++LVGMMGSGK+TVG
Sbjct: 58 VAPLRAKKSSGGHE----TLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVG 113
Query: 112 EILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVAT 171
+I+S+ L Y+F DSDK VE+ +G SVAQIFK EA+FR+ ES L+ LS + + VVAT
Sbjct: 114 KIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVAT 173
Query: 172 GGGAVVRPLNWRFMRQGI 189
GGGAV+RP+NW++M++G+
Sbjct: 174 GGGAVIRPVNWKYMKKGL 191
>gi|159464345|ref|XP_001690402.1| shikimate kinase [Chlamydomonas reinhardtii]
gi|158279902|gb|EDP05661.1| shikimate kinase [Chlamydomonas reinhardtii]
Length = 327
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 116/200 (58%), Gaps = 15/200 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
LF VGMMGSGK+TVG++L++ L Y F D+D +E V+QIF E G+ YFR+ ES+
Sbjct: 101 LFQVGMMGSGKSTVGKMLANTLKYAFFDTDSVIELAHDKKPVSQIFAEEGQDYFRQCESQ 160
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
+++LS V++TGGGAV++P NW +M GI +LN + LARR+A G + PLL
Sbjct: 161 IIKELSPYRNLVISTGGGAVLKPQNWGYMHLGIVAWLNGDTELLARRVAKDGIEKRPLLA 220
Query: 217 YDS---ADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAME 273
D+ AD A T L AL ++R + Y NAD V+L KD+ D PT M
Sbjct: 221 ADAPEGADMQQVAKTKLDALLEDRRKYYENADVVVTLEGYG-----KDLEDGAPTAAVMY 275
Query: 274 VL-------VQAQKYLNSKR 286
L VQA+K ++R
Sbjct: 276 RLLTAINDKVQAKKREQAER 295
>gi|56750655|ref|YP_171356.1| shikimate kinase [Synechococcus elongatus PCC 6301]
gi|81299703|ref|YP_399911.1| shikimate kinase [Synechococcus elongatus PCC 7942]
gi|81596488|sp|Q5N4D3.1|AROK_SYNP6 RecName: Full=Shikimate kinase; Short=SK
gi|116257513|sp|Q31PU5.1|AROK_SYNE7 RecName: Full=Shikimate kinase; Short=SK
gi|56685614|dbj|BAD78836.1| shikimate kinase [Synechococcus elongatus PCC 6301]
gi|81168584|gb|ABB56924.1| shikimate kinase [Synechococcus elongatus PCC 7942]
Length = 190
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 120/184 (65%), Gaps = 10/184 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+ + L+G LFLVG+MGSGKTT+G++L+++L YT+ D+D +E + G S+ +IF GE
Sbjct: 3 LVTALNGLDLFLVGLMGSGKTTIGKLLAESLGYTYVDTDSLIENVTG-RSIPEIFASDGE 61
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
A FR+ E++ L++++ + VVATGGG V+RP NW +++QG+ ++L+VP+ L RR+
Sbjct: 62 AGFRQIETQVLEEVASYRRLVVATGGGIVIRPENWSYLQQGLVIWLDVPIPELLRRLE-- 119
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL-LNLAACIGLKDVLDIT 266
G + PLL ++ T L AL ++R + YA AD +++ + + ++ +L++
Sbjct: 120 GDQNRPLLQTEA------PATTLQALWEQRRDRYAQADLRIAIEASEDPEVTMQRILEVI 173
Query: 267 PTTI 270
P+ +
Sbjct: 174 PSVL 177
>gi|255291839|dbj|BAH89269.1| putative shikimate kinase [Diospyros kaki]
Length = 86
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 77/86 (89%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVGMMGSGKTTVG++LS+AL Y+F DSDKYVE+ +GG+ V QIFK+ GE+YFR YES+
Sbjct: 1 IYLVGMMGSGKTTVGKVLSEALAYSFVDSDKYVEEALGGSPVTQIFKQFGESYFRGYESE 60
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNW 182
AL+ LSL+P+QVVAT GGAV+RP+NW
Sbjct: 61 ALRNLSLMPRQVVATDGGAVIRPINW 86
>gi|168031989|ref|XP_001768502.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680215|gb|EDQ66653.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 300
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 132/225 (58%), Gaps = 14/225 (6%)
Query: 51 NLVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTV 110
NL ++SKD+ + + S D LLK K E+ L G C+FL+GMM +GK +V
Sbjct: 73 NLSTTNLSKDAQGEEPVAEE--PSPDFDLLLKEKADELRDELQGTCIFLIGMMDNGKASV 130
Query: 111 GEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVA 170
G++L+ L Y F DS+ V++ G +++ E +RE E++ L++LS + + VVA
Sbjct: 131 GKMLAKELGYYFFDSNDLVQQAADGEEISE-----NEEGYREAETEVLKQLSSMGRLVVA 185
Query: 171 TGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTAL 230
TG G V+ NW ++R GI V++++P++ +A+ + LL +S+D +A + L
Sbjct: 186 TGAGTVLNTENWGYLRHGIVVWIDIPVETVAK-----DAKTRQLLVPNSSDD--EALSKL 238
Query: 231 SALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVL 275
+ + +ER E Y NADATVS+ L A +G++D +TP A++VL
Sbjct: 239 TKMYEERKEVYMNADATVSIQVLPAQLGIEDSSLVTPAMTALQVL 283
>gi|449464238|ref|XP_004149836.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
gi|449522321|ref|XP_004168175.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 307
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 140/244 (57%), Gaps = 7/244 (2%)
Query: 44 LKRHRTLNLVPAH-VSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGM 102
++R R+L P+ ++ D A +VE+ D L + +K K +VA L G +FLVG+
Sbjct: 61 IRRRRSL---PSSCLASDGTALNVEAKVTVDDLSLE--VKKKAMDVAPELKGTSIFLVGI 115
Query: 103 MGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLS 162
S KT +G++L+D L Y + DSD V ++ GG + A+++K+S E F+ +E++ L++LS
Sbjct: 116 NSSIKTKLGKLLADVLRYYYFDSDSLVVEVSGGEAAAKLYKQSDEKGFQAFETEVLKQLS 175
Query: 163 LVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADS 222
+ + VV G GAV N +R GIT+++++PL +A A P+ D ++ S
Sbjct: 176 SMGRLVVCAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAE-DRSQHPVFDISTSGS 234
Query: 223 YTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
Y++ +++L ++ + YA ADA +SL LA+ +G D +T +AME L + +K
Sbjct: 235 YSEVLGQITSLYQKVKDGYATADALISLQKLASKLGYDDFNAVTTEDMAMEALKEIEKLT 294
Query: 283 NSKR 286
K+
Sbjct: 295 RVKK 298
>gi|225451543|ref|XP_002273840.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
gi|296082301|emb|CBI21306.3| unnamed protein product [Vitis vinifera]
Length = 305
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 126/224 (56%), Gaps = 6/224 (2%)
Query: 68 SGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDK 127
S T +D +K K E++ L G +FLVGM + KT VG++L+DAL Y DSD
Sbjct: 74 SATKVVDVDLSLAVKKKAMEISPVLKGTSIFLVGMNSTIKTNVGKLLADALRYYHFDSDS 133
Query: 128 YVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ 187
VE+ GG S A+ KE E F + E++ L++LS + + VV G G V N +R
Sbjct: 134 LVEEACGGESAAKSLKEQDEKGFHDSETEVLKQLSSMGRLVVCAGDGLVQSSTNLALLRH 193
Query: 188 GITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYT-----KAFTALSALSKERSEAYA 242
GI+++++VP++ +A+ + G P+ + +A+SY+ + F L+ + +E YA
Sbjct: 194 GISIWIDVPIEMVAKNMIEEGVQ-IPVTELSTAESYSETGDNQVFAQLAVVYEEMKGGYA 252
Query: 243 NADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSKR 286
ADA+VSL +A+ +G D+ +T +AMEVL + Q+ K+
Sbjct: 253 TADASVSLQKVASQLGYDDLDAVTTEDMAMEVLKEIQRLTRLKK 296
>gi|166364892|ref|YP_001657165.1| shikimate kinase [Microcystis aeruginosa NIES-843]
gi|238687539|sp|B0JFW8.1|AROK_MICAN RecName: Full=Shikimate kinase; Short=SK
gi|166087265|dbj|BAG01973.1| shikimate kinase [Microcystis aeruginosa NIES-843]
Length = 190
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 110/182 (60%), Gaps = 10/182 (5%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G +FL+GMMGSGK+T+GE+LS L Y F D+D +E+ + G + +IF + GEA
Sbjct: 8 NSLRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFVDEGEAT 66
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FRE E++ L +LS + + V+ATGGG V++P+NW ++R G+ ++L+VPL+ L +R+
Sbjct: 67 FRELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEILVKRLKQ--D 124
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL-KDVLDITPT 268
S PLL DS L L ++R YA AD + + +L + + +L PT
Sbjct: 125 TSRPLLQSTDLDS------KLELLLEQRRGLYAEADLRIVVSDLDTPTDIVEKILTAIPT 178
Query: 269 TI 270
I
Sbjct: 179 VI 180
>gi|427704162|ref|YP_007047384.1| shikimate kinase [Cyanobium gracile PCC 6307]
gi|427347330|gb|AFY30043.1| shikimate kinase [Cyanobium gracile PCC 6307]
Length = 215
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 100/164 (60%), Gaps = 8/164 (4%)
Query: 86 REVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKES 145
R++A LDG ++LVGMMG+GK+ VG L++AL Y F D+D + + + G +A+IF
Sbjct: 14 RDLARRLDGLNIYLVGMMGAGKSAVGRPLAEALGYRFIDADTALGE-VAGRPIAEIFASD 72
Query: 146 GEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIA 205
GE FR E+ L ++ VVATGGGAV+RP NW MRQG+ V+L+ P D L RR+A
Sbjct: 73 GEDGFRTLETAVLNGIASWHSLVVATGGGAVIRPENWGHMRQGLVVWLDAPADELVRRLA 132
Query: 206 AVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
A T PLL D+ D + L AL ER YA AD TV+
Sbjct: 133 ADPT-PRPLL--DAPDPAAR----LEALLHERRPLYAQADLTVA 169
>gi|302830073|ref|XP_002946603.1| hypothetical protein VOLCADRAFT_86714 [Volvox carteri f.
nagariensis]
gi|300268349|gb|EFJ52530.1| hypothetical protein VOLCADRAFT_86714 [Volvox carteri f.
nagariensis]
Length = 352
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 115/216 (53%), Gaps = 21/216 (9%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
E+ L G ++L+GMMGSGK+TVG++LS+ L Y F D+D +E V+QIF E G
Sbjct: 101 ELTKDLRGCNIWLIGMMGSGKSTVGKMLSNTLKYAFFDTDSVIELAHDKKPVSQIFAEEG 160
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAA 206
+ YFR ES+ +++LS V+ATGGGAV+RP NW +M GI +LN +D LARR+
Sbjct: 161 QEYFRNCESQIIKELSPYRNLVIATGGGAVLRPENWGYMHLGIVCWLNGDVDLLARRVVR 220
Query: 207 VGTDSFPLLDYDSADSYTK---------AFTALSALSKERSEAYANADATVSLLNLAACI 257
G + PLL SA A L+AL ++R Y NAD V+L
Sbjct: 221 DGLEKRPLLAAASAADGGGAEGGGALGVARDKLAALQEQRRRYYENADVVVTLEGYG--- 277
Query: 258 GLKDVLDITPTTIAMEVL-------VQAQKYLNSKR 286
KD PT M L VQA+K ++R
Sbjct: 278 --KDAEAGAPTAAVMYRLLSAINEKVQAKKREQAQR 311
>gi|427714678|ref|YP_007063302.1| shikimate kinase [Synechococcus sp. PCC 6312]
gi|427378807|gb|AFY62759.1| shikimate kinase [Synechococcus sp. PCC 6312]
Length = 188
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 113/191 (59%), Gaps = 20/191 (10%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L+G L+L+GMMGSGKTT G+ L+ AL Y F D+D+ +E+ + G SV++IF ++GEA FR
Sbjct: 14 LNGTNLYLIGMMGSGKTTTGQELAAALGYRFMDTDRLIEQ-VAGQSVSEIFAQAGEATFR 72
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ E++ L ++S VVATGGG ++ P+NW ++ G+ ++L V + L R+A G +
Sbjct: 73 QLETQVLAEVSCYHHLVVATGGGIILEPMNWSYLHHGLVIWLKVSIPNLVNRLA--GDTT 130
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIA 271
PLL ++ L+ L++ R+E YA AD T+++ + D+ P ++
Sbjct: 131 RPLL------AHAALAEKLTTLAQARNEFYAQADLTLTIAD-----------DLRPHQVS 173
Query: 272 MEVLVQAQKYL 282
+L K L
Sbjct: 174 QAILTALPKIL 184
>gi|428211742|ref|YP_007084886.1| shikimate kinase [Oscillatoria acuminata PCC 6304]
gi|428000123|gb|AFY80966.1| shikimate kinase [Oscillatoria acuminata PCC 6304]
Length = 182
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 110/192 (57%), Gaps = 20/192 (10%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G L+L+GMMGSGKTTV +IL+ L+Y + DSD+ +E+ + G S+ +IF ESGEA FR
Sbjct: 5 LKGCNLYLIGMMGSGKTTVAQILAPQLEYRYLDSDRLIEQ-VAGQSIPEIFAESGEAAFR 63
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
E E+K L +L VVATGGG ++ NW +++ G+ V+L+VP++ L +R+A G +
Sbjct: 64 ELETKVLSELCAYTHLVVATGGGIILNRQNWSYLQHGVVVWLDVPVEQLYQRLA--GDTT 121
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIA 271
PLL D K L +L +R Y AD V +G +D TP IA
Sbjct: 122 RPLL--RDPDPMAK----LRSLLDQRQSLYKQADVRV-------IVGPED----TPEQIA 164
Query: 272 MEVLVQAQKYLN 283
VL + K L
Sbjct: 165 TGVLAEISKILK 176
>gi|390440354|ref|ZP_10228690.1| Shikimate kinase [Microcystis sp. T1-4]
gi|389836236|emb|CCI32816.1| Shikimate kinase [Microcystis sp. T1-4]
Length = 190
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 113/183 (61%), Gaps = 12/183 (6%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G +FL+GMMG+GK+T+GE+LS L Y F D+D +E+ + G + QIF + GEA
Sbjct: 8 NSLRGLSVFLLGMMGAGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIRQIFADEGEAT 66
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FRE E++ L +LS + + V+ATGGG V++P+NW ++R G+ ++L+VPL+ L +R+
Sbjct: 67 FRELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEVLVKRLKQ--D 124
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANAD--ATVSLLNLAACIGLKDVLDITP 267
S PLL+ T + L L ++R YA AD VS L+ A I ++ +L P
Sbjct: 125 TSRPLLE------STDLESKLELLLEQRRGLYAEADLRIVVSDLDTPAHI-VEKILTAIP 177
Query: 268 TTI 270
T I
Sbjct: 178 TVI 180
>gi|334121375|ref|ZP_08495445.1| Shikimate kinase [Microcoleus vaginatus FGP-2]
gi|333455089|gb|EGK83750.1| Shikimate kinase [Microcoleus vaginatus FGP-2]
Length = 183
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 108/196 (55%), Gaps = 20/196 (10%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G ++LVGMMGSGKTTVG IL+ L Y F D+D+ + ++ S+A+IF + GE FR
Sbjct: 4 LRGVNIYLVGMMGSGKTTVGRILAKKLKYRFFDTDELIVRV-ANQSIAEIFAQEGEEAFR 62
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
E E+K L +LS VVATGGG V R +NW ++ G+ V+L+VP+D L R+ + +
Sbjct: 63 ELETKVLGELSAYQNSVVATGGGIVARSMNWGYLHYGVVVWLDVPVDQLYDRLRS--DTA 120
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIA 271
PLL S L +L KER Y AD V A +G K P +A
Sbjct: 121 RPLLQEGEIKS------KLQSLLKERERFYTQADVRVY-----AGVGEK------PEAVA 163
Query: 272 MEVLVQAQKYLNSKRR 287
+ + QK + S+RR
Sbjct: 164 TRAIEEIQKVIKSERR 179
>gi|428769981|ref|YP_007161771.1| shikimate kinase [Cyanobacterium aponinum PCC 10605]
gi|428684260|gb|AFZ53727.1| shikimate kinase [Cyanobacterium aponinum PCC 10605]
Length = 183
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 97/163 (59%), Gaps = 9/163 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+ L G ++L+GMMGSGKTTVGE+L+ L+Y F D+D + + S+ QIF E GE
Sbjct: 1 MKELLKGLNIYLIGMMGSGKTTVGELLAKELEYRFLDTDAIISAV-SEKSINQIFAEDGE 59
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
FR+ ES LQ++S V+ATGGG ++R NW +R G+ V+LNVP+D L +R+
Sbjct: 60 DEFRQLESDVLQEVSAYLYTVIATGGGIILRQQNWSHLRDGMVVWLNVPIDVLVQRLK-- 117
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
D+ PLL + T L++L ++R Y AD T+ +
Sbjct: 118 DDDTRPLLKREELQ------TKLTSLYEQRKSLYQQADITIGI 154
>gi|425455716|ref|ZP_18835429.1| Shikimate kinase [Microcystis aeruginosa PCC 9807]
gi|389803372|emb|CCI17712.1| Shikimate kinase [Microcystis aeruginosa PCC 9807]
Length = 190
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 113/183 (61%), Gaps = 12/183 (6%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G +FL+GMMGSGK+T+GE+LS L Y F D+D +E+ + G + +IF + GEA
Sbjct: 8 NSLRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEAT 66
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FRE E++ L +LS + + V+ATGGG V++P+NW ++R G+ ++L+VPL+ L +R+
Sbjct: 67 FRELETQVLAELSSLTKTVIATGGGMVLKPINWSYLRHGLMIWLDVPLEVLVKRLKQ--D 124
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANAD--ATVSLLNLAACIGLKDVLDITP 267
S PLL+ T + L L ++R YA AD VS L+ A I ++ +L P
Sbjct: 125 TSRPLLE------STDLESKLELLLEQRRGLYAEADLRIVVSDLDTPADI-VEKILTAIP 177
Query: 268 TTI 270
T I
Sbjct: 178 TVI 180
>gi|425472135|ref|ZP_18850986.1| Shikimate kinase [Microcystis aeruginosa PCC 9701]
gi|389881854|emb|CCI37641.1| Shikimate kinase [Microcystis aeruginosa PCC 9701]
Length = 190
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 112/183 (61%), Gaps = 12/183 (6%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G +FL+GMMGSGK+T+GE+LS L Y F D+D +E++ G + +IF + GEA
Sbjct: 8 NSLRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERV-AGKKIREIFVDEGEAT 66
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FRE E++ L +LS + + V+ATGGG V++P+NW ++R G+ ++L+VPL+ L +R+
Sbjct: 67 FRELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEVLVKRLKQ--D 124
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANAD--ATVSLLNLAACIGLKDVLDITP 267
S PLL T + L L ++R YA AD VS L+ A I ++ +L P
Sbjct: 125 TSRPLL------QSTDLESKLELLLEQRRGLYAEADIRIVVSDLDTPAHI-VEKILTAIP 177
Query: 268 TTI 270
T I
Sbjct: 178 TVI 180
>gi|356498875|ref|XP_003518273.1| PREDICTED: shikimate kinase, chloroplastic [Glycine max]
Length = 280
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 132/257 (51%), Gaps = 16/257 (6%)
Query: 33 QQHFINLNPLKLKRHRTLNLVPAHVSKDSNAHDVESGTFCDSL---DGKWLLKAKGREVA 89
Q F+ L R R LN V GT SL D +K K EV+
Sbjct: 28 QNSFLKFPNPNLHRLRRLNC------------SVSDGTVSSSLGATDSSLAVKKKAAEVS 75
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
S L G +FLVG+ S KT++G++L+DAL Y + DSD VE+ +GG A+ F+ES E
Sbjct: 76 SELKGTSIFLVGLKSSLKTSLGKLLADALRYYYFDSDSLVEEAVGGALAAKSFRESDEKG 135
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
F E E++ L++LS + + VV G G V N +R GI+++++VPLD +AR +
Sbjct: 136 FYESETEVLKQLSSMGRLVVCAGNGTVTSSTNLALLRHGISLWIDVPLDFVARDVIE-DK 194
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTT 269
F + + SY + L AL + YA ADA +S+ + + +G ++ +IT
Sbjct: 195 SQFAPSEISISGSYPEVQDELGALYDKYRVGYATADAIISVQKVVSRLGCDNLDEITRED 254
Query: 270 IAMEVLVQAQKYLNSKR 286
+A+E L + +K K+
Sbjct: 255 MALEALREIEKLTRVKK 271
>gi|425459812|ref|ZP_18839298.1| Shikimate kinase [Microcystis aeruginosa PCC 9808]
gi|389827663|emb|CCI20915.1| Shikimate kinase [Microcystis aeruginosa PCC 9808]
Length = 190
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 112/183 (61%), Gaps = 12/183 (6%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G +FL+GMMG+GK+T+GE+LS L Y F D+D +E+ + G + +IF + GEA
Sbjct: 8 NSLRGLSVFLLGMMGAGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEAT 66
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FRE E++ L +LS + + V+ATGGG V++P+NW ++R G+ ++L+VPL+ L +R+
Sbjct: 67 FRELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEVLVKRLKQ--D 124
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANAD--ATVSLLNLAACIGLKDVLDITP 267
S PLL T + L L ++R YA AD VS L+ A I ++ +L P
Sbjct: 125 TSRPLL------QSTDLESKLELLLEQRRGLYAEADLRIVVSELDTPAHI-VEKILTAIP 177
Query: 268 TTI 270
T I
Sbjct: 178 TVI 180
>gi|443653401|ref|ZP_21131078.1| shikimate kinase family protein [Microcystis aeruginosa DIANCHI905]
gi|159030194|emb|CAO91086.1| aroK [Microcystis aeruginosa PCC 7806]
gi|443334040|gb|ELS48570.1| shikimate kinase family protein [Microcystis aeruginosa DIANCHI905]
Length = 190
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 113/183 (61%), Gaps = 12/183 (6%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G +FL+GMMGSGK+T+GE+LS L Y F D+D +E+ + G + +IF + GEA
Sbjct: 8 NSLRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEAT 66
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FRE E++ L +LS + + V+ATGGG V++P+NW ++R G+ ++L+VPL+ L +R+
Sbjct: 67 FRELETQVLAELSSLTKTVIATGGGMVLKPINWSYLRHGLMIWLDVPLEVLVKRLKQ--D 124
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADAT--VSLLNLAACIGLKDVLDITP 267
S PLL+ T + L L ++R YA AD VS L+ A I ++ +L P
Sbjct: 125 TSRPLLE------STDLESKLELLLEQRRGLYAEADLRIFVSDLDTPADI-VEKILTAIP 177
Query: 268 TTI 270
T I
Sbjct: 178 TVI 180
>gi|425442960|ref|ZP_18823194.1| Shikimate kinase [Microcystis aeruginosa PCC 9717]
gi|389715849|emb|CCH99842.1| Shikimate kinase [Microcystis aeruginosa PCC 9717]
Length = 190
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 112/183 (61%), Gaps = 12/183 (6%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G +FL+GMMG+GK+T+GE+LS L Y F D+D +E+ + G + +IF + GEA
Sbjct: 8 NSLRGLSVFLLGMMGAGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEAT 66
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FRE E++ L +LS + + V+ATGGG V++P+NW ++R G+ ++L+VPL+ L +R+
Sbjct: 67 FRELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEVLVKRLKK--D 124
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANAD--ATVSLLNLAACIGLKDVLDITP 267
S PLL T + L L ++R YA AD VS L+ A I ++ +L P
Sbjct: 125 TSRPLL------QSTDLESKLELLLEQRRGLYAEADLRIVVSDLDTPAHI-VEKILTAIP 177
Query: 268 TTI 270
T I
Sbjct: 178 TVI 180
>gi|425452721|ref|ZP_18832536.1| Shikimate kinase [Microcystis aeruginosa PCC 7941]
gi|389765347|emb|CCI08717.1| Shikimate kinase [Microcystis aeruginosa PCC 7941]
Length = 190
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 111/182 (60%), Gaps = 10/182 (5%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G +FL+GMMGSGK+T+GE+LS L Y F D+D +E+ + G + +IF + GEA
Sbjct: 8 NSLRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEAT 66
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FRE E++ L +LS + + V+ATGGG V++P+NW ++R G+ ++L+VPL+ L +R+
Sbjct: 67 FRELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEILVKRLKQ--D 124
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL-KDVLDITPT 268
S PLL+ T + L L ++R YA AD + + +L + + +L PT
Sbjct: 125 TSRPLLE------STDLESKLELLLEQRRGLYAEADLRIVVYDLDRPTDIVEKILTAIPT 178
Query: 269 TI 270
I
Sbjct: 179 VI 180
>gi|425438084|ref|ZP_18818493.1| Shikimate kinase [Microcystis aeruginosa PCC 9432]
gi|389676823|emb|CCH94217.1| Shikimate kinase [Microcystis aeruginosa PCC 9432]
Length = 190
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 110/182 (60%), Gaps = 10/182 (5%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G +FL+GMMGSGK+T+GE+LS L Y F D+D +E+ + G + +IF + GEA
Sbjct: 8 NSLRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEAT 66
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FRE E++ L +LS + + V+ATGGG V++P+NW ++R G+ ++L+VPL+ L +R+
Sbjct: 67 FRELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEVLVKRLKQ--D 124
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL-KDVLDITPT 268
S PLL T + L L ++R YA AD + + +L + + +L PT
Sbjct: 125 TSRPLL------QSTDLESKLELLLEQRRGLYAEADLRIVVYDLDRPTDIVEKILTAIPT 178
Query: 269 TI 270
I
Sbjct: 179 VI 180
>gi|440755112|ref|ZP_20934314.1| shikimate kinase family protein [Microcystis aeruginosa TAIHU98]
gi|440175318|gb|ELP54687.1| shikimate kinase family protein [Microcystis aeruginosa TAIHU98]
Length = 190
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 111/182 (60%), Gaps = 10/182 (5%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G +FL+GMMGSGK+T+GE+LS L Y F D+D +E+ + G + +IF + GEA
Sbjct: 8 NSLRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEAT 66
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FRE E++ L +LS + + V+ATGGG V++P+NW ++R G+ ++L+VPL+ L +R+
Sbjct: 67 FRELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEILVKRLKQ--D 124
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL-KDVLDITPT 268
S PLL+ T + L L ++R YA AD + + +L + + +L PT
Sbjct: 125 TSRPLLE------STDLESKLELLLEQRRGLYAEADLRIVVYDLDRPADIVEKILTAIPT 178
Query: 269 TI 270
I
Sbjct: 179 VI 180
>gi|411118274|ref|ZP_11390655.1| shikimate kinase [Oscillatoriales cyanobacterium JSC-12]
gi|410711998|gb|EKQ69504.1| shikimate kinase [Oscillatoriales cyanobacterium JSC-12]
Length = 190
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 115/197 (58%), Gaps = 20/197 (10%)
Query: 86 REVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKES 145
+ ++ L G L+L+GMMG+GKTTVG +++ AL Y F D+D +E++ G + +F E
Sbjct: 3 KSLSDRLQGINLYLIGMMGAGKTTVGRLIAQALGYQFFDTDAVIEQVTG-QPITALFTEM 61
Query: 146 GEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIA 205
GEA FRE E++ L +LS + +ATGGG V+R NW ++R G+ V+L+VPL+ L +R+
Sbjct: 62 GEAGFRELETRVLAELSTYTRLAIATGGGIVLRHENWGYLRHGVIVWLDVPLEQLQQRLQ 121
Query: 206 AVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDI 265
+ + PLL + D T+ L L +R YA AD V G + +
Sbjct: 122 S--DTNRPLL--QTGDLTTR----LQTLLDQRRSLYAQADVHV---------GYR--VGE 162
Query: 266 TPTTIAMEVLVQAQKYL 282
TPT +A +VL+Q Q+ L
Sbjct: 163 TPTQVAEQVLIQVQQVL 179
>gi|425467327|ref|ZP_18846610.1| Shikimate kinase [Microcystis aeruginosa PCC 9809]
gi|389829918|emb|CCI28391.1| Shikimate kinase [Microcystis aeruginosa PCC 9809]
Length = 190
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 110/182 (60%), Gaps = 10/182 (5%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G +FL+GMMGSGK+T+GE+LS L Y F D+D +E+ + G + +IF + GEA
Sbjct: 8 NSLRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEAT 66
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FRE E++ L +LS + + V+ATGGG V++P+NW ++R G+ ++L+VPL+ L +R+
Sbjct: 67 FRELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEILVKRLKQ--D 124
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL-KDVLDITPT 268
S PLL T + L L ++R YA AD + + +L + + +L PT
Sbjct: 125 TSRPLL------QSTDLESKLELLLEQRRGLYAEADLRIVVSDLDTPTDIVEKILTAIPT 178
Query: 269 TI 270
I
Sbjct: 179 VI 180
>gi|425444946|ref|ZP_18824986.1| Shikimate kinase [Microcystis aeruginosa PCC 9443]
gi|389735150|emb|CCI01281.1| Shikimate kinase [Microcystis aeruginosa PCC 9443]
Length = 190
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 112/183 (61%), Gaps = 12/183 (6%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G +FL+GMMGSGK+T+GE+LS L Y F D+D +E+ + G + +IF + GE
Sbjct: 8 NSLRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEGT 66
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FRE E++ L +LS + + V+ATGGG V++P+NW ++R G+ ++L+VPL+ L +R+
Sbjct: 67 FRELETQVLAELSSLTKTVIATGGGMVLKPINWSYLRHGLMIWLDVPLEVLVKRLKQ--D 124
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANAD--ATVSLLNLAACIGLKDVLDITP 267
S PLL+ T + L L ++R YA AD VS L+ A I ++ +L P
Sbjct: 125 TSRPLLE------STDLESKLELLLEQRRGLYAEADLRIVVSDLDTPADI-VEKILTAIP 177
Query: 268 TTI 270
T I
Sbjct: 178 TVI 180
>gi|434396920|ref|YP_007130924.1| shikimate kinase [Stanieria cyanosphaera PCC 7437]
gi|428268017|gb|AFZ33958.1| shikimate kinase [Stanieria cyanosphaera PCC 7437]
Length = 182
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 110/187 (58%), Gaps = 16/187 (8%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+ L G ++L+GMMG GKTT+G++L+ L+Y F D+D +E++ S+ +IF ESGE
Sbjct: 5 IEQSLHGISIYLIGMMGVGKTTIGKLLAHQLNYRFFDTDVLIERVTQ-QSIPEIFAESGE 63
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
FRE E + LQ++S+ + V+ATGGG V R +NW +++QG+ ++L+V ++ L +R+A
Sbjct: 64 DNFRELEHQVLQEISVETKSVIATGGGIVERQINWSYLQQGLIIWLDVEVEVLKQRLAE- 122
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL-LNLAACIGLKDVLDIT 266
+ PL D L L ++RS YA AD + + N ++ +L++
Sbjct: 123 -DQNRPLAD------------KLELLLQKRSSLYAQADLRLKIAANQTPEAIVEQILELI 169
Query: 267 PTTIAME 273
PT I E
Sbjct: 170 PTVIKSE 176
>gi|255087652|ref|XP_002505749.1| predicted protein [Micromonas sp. RCC299]
gi|226521019|gb|ACO67007.1| predicted protein [Micromonas sp. RCC299]
Length = 269
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 102/175 (58%), Gaps = 2/175 (1%)
Query: 86 REVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKES 145
+EV LDG LFLVGMMG+GK++VG+ L+ +L Y+F D+D+ +E++ T++ +IF ES
Sbjct: 55 KEVKEALDGSSLFLVGMMGTGKSSVGKKLAASLGYSFFDTDEVIEQVTK-TTIPEIFAES 113
Query: 146 GEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIA 205
GE FRE E++ L +++ + VVATGGG V + NW +R G+ + L LA RI
Sbjct: 114 GEDGFREIETQVLAEIAAYKKCVVATGGGVVKKKANWMHLRNGVVLCLTGTPTLLAARIT 173
Query: 206 AVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLK 260
G ++ PL D D + + KER+ YANAD V L G++
Sbjct: 174 RDGAETRPLF-KDVGDDVDAIAAKVEEMMKERAPMYANADVQVRLAEADGAPGVE 227
>gi|422302513|ref|ZP_16389875.1| Shikimate kinase [Microcystis aeruginosa PCC 9806]
gi|389788246|emb|CCI16208.1| Shikimate kinase [Microcystis aeruginosa PCC 9806]
Length = 190
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 110/182 (60%), Gaps = 10/182 (5%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G +FL+GMMGSGK+T+GE+LS L Y F D+D +E+ + G + +IF + GEA
Sbjct: 8 NSLRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEAT 66
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FRE E++ L +LS + + V+ATGGG V++P+NW ++R G+ ++L+VPL+ L +R+
Sbjct: 67 FRELETQVLVELSSLTKTVIATGGGMVLKPINWSYLRHGLMIWLDVPLEVLVKRLKQ--D 124
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL-KDVLDITPT 268
S PLL+ T + L L ++R Y AD + + +L + + +L PT
Sbjct: 125 TSRPLLE------STDLESKLELLLEQRRGLYGEADLRIVVSDLDTPTDIVEKILTAIPT 178
Query: 269 TI 270
I
Sbjct: 179 VI 180
>gi|218438870|ref|YP_002377199.1| shikimate kinase [Cyanothece sp. PCC 7424]
gi|218171598|gb|ACK70331.1| Shikimate kinase [Cyanothece sp. PCC 7424]
Length = 184
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 113/199 (56%), Gaps = 18/199 (9%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+++ L G +FLVG+ G+GKTTVG+ L++ LDY F DSD ++K+ G T + +IF GE
Sbjct: 1 MSNLLKGLSIFLVGLPGTGKTTVGQGLAEQLDYRFFDSDVVIKKVTGQT-IKEIFATQGE 59
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
+FRE ES+ L++L + V+ATGGG +++ +NW ++R G+ ++L+ P+D L +R+A
Sbjct: 60 DFFRELESQVLRELCAYTRSVIATGGGIILKQINWSYLRHGLIIWLDAPVDLLIQRLADD 119
Query: 208 GT---DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLD 264
+ PLL D D + L L +R YA AD +++ + +
Sbjct: 120 SNRDDPNRPLLQVDDLDELRQ---KLEFLLSQRQSLYAEADLRIAITS-----------E 165
Query: 265 ITPTTIAMEVLVQAQKYLN 283
TP I +++ Q LN
Sbjct: 166 QTPDDIVSQIVTQIPTVLN 184
>gi|303289006|ref|XP_003063791.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454859|gb|EEH52164.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 167
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 99/165 (60%), Gaps = 3/165 (1%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
VA LDG +FLVGMMG+GK++VG+ L+ L Y F D+D+ +E + T + +IF E GE
Sbjct: 1 VADALDGSSVFLVGMMGTGKSSVGKKLAAELGYNFFDTDEIIESVTKMT-IPEIFAEEGE 59
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIA-A 206
FRE E++ L +++ + VVATGGG V R NW +R GI + L+ LARR+A A
Sbjct: 60 DGFREIETQILAEIASYKKCVVATGGGIVKRKANWMHLRNGIVLCLSGSAKLLARRVADA 119
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLL 251
G S PL D K + + KER+E YANAD +V LL
Sbjct: 120 DGGASRPLF-KDCDGDVDKIAEKIQEMMKERAEMYANADISVQLL 163
>gi|86609195|ref|YP_477957.1| shikimate kinase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|115312166|sp|Q2JKT7.1|AROK_SYNJB RecName: Full=Shikimate kinase; Short=SK
gi|86557737|gb|ABD02694.1| shikimate kinase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 187
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 99/164 (60%), Gaps = 8/164 (4%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
E L G ++L+GMMGSGK+TVG L+ L + F D+D VE++ GG+S+AQIF E G
Sbjct: 5 EEVERLRGVNVYLIGMMGSGKSTVGSELAAQLRFQFFDTDGLVEQV-GGSSIAQIFAEHG 63
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAA 206
EAYFR+ E++ L +LS + V+ATGGG V+RP NW ++ G+TV+L+V + + +R+
Sbjct: 64 EAYFRDLETQVLAQLSSYTRLVIATGGGIVLRPKNWSYLHHGLTVWLDVAPELIWQRLKR 123
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL + AL L +ER YA AD V +
Sbjct: 124 -DPGQRPLLQTPDPQA------ALYKLMQEREPFYAQADVRVPI 160
>gi|428201800|ref|YP_007080389.1| shikimate kinase [Pleurocapsa sp. PCC 7327]
gi|427979232|gb|AFY76832.1| shikimate kinase [Pleurocapsa sp. PCC 7327]
Length = 185
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 112/198 (56%), Gaps = 20/198 (10%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+ + L G +FLVG+MG+GKTTVG+IL+ L Y F D+D +E++ G T + +IF GE
Sbjct: 1 MTNLLQGVSVFLVGIMGTGKTTVGQILAQQLGYRFFDTDVLIERVAGQT-INEIFARQGE 59
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
FRE E++ L +LS + V+ATGGG V+RP+NW ++ G+ V+L+ P++ L +R+A
Sbjct: 60 ERFRELETQVLAELSAYTKSVIATGGGIVMRPINWSYLHHGLIVWLDAPVELLRKRLAED 119
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITP 267
T PLL + D K LS+L + R Y AD +++ + TP
Sbjct: 120 TTR--PLL--QAIDRAKK----LSSLLEIRRPLYQQADLQIAIAQ-----------NQTP 160
Query: 268 TTIAMEVLVQAQKYLNSK 285
I +++ Q L SK
Sbjct: 161 EQITAKLIEQIPTVLKSK 178
>gi|255543635|ref|XP_002512880.1| protein with unknown function [Ricinus communis]
gi|223547891|gb|EEF49383.1| protein with unknown function [Ricinus communis]
Length = 292
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 121/212 (57%), Gaps = 8/212 (3%)
Query: 75 LDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMG 134
LD LK + +++ L G +FLVGM S KT++G++L+D+L Y + DSD VE++
Sbjct: 80 LDSSLALKKRAADISPELKGTSIFLVGMRSSMKTSLGKLLADSLRYYYFDSDSLVEEVAS 139
Query: 135 GTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLN 194
G S A+ FKE+ E FRE E++ L++LS + + VV G GAV N +R GI+++++
Sbjct: 140 GASAAKSFKETDEKGFRESETEVLKQLSSMGRLVVCAGDGAVQSFTNLALLRHGISLWID 199
Query: 195 VPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLA 254
VPLD +A+ A+ +S L DS + T L A + YA ADAT+SL +A
Sbjct: 200 VPLDMVAQ---AMSEESDQLSGADSEE-----LTELIATFEAMRGGYATADATISLQKVA 251
Query: 255 ACIGLKDVLDITPTTIAMEVLVQAQKYLNSKR 286
+G + +T + +EVL + +K K+
Sbjct: 252 VNLGYDALDSVTAEDMTLEVLKEIEKLTRVKK 283
>gi|388510864|gb|AFK43498.1| unknown [Lotus japonicus]
Length = 280
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 132/249 (53%), Gaps = 24/249 (9%)
Query: 40 NPLKLKRHRTLN--LVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCL 97
NPL+ +R + +P+ VS + D +K K +V+ L G +
Sbjct: 45 NPLQFRRPPPITNCSIPSSVSN------------VGATDLSLAVKKKAADVSPELRGTSI 92
Query: 98 FLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKA 157
FLVGM GS KT++G++L +AL Y + DSD VE+ +GG S A ++S E F E E++
Sbjct: 93 FLVGMKGSLKTSLGKLLVEALRYYYFDSDSLVEEALGGVSAANSVRQSDEKGFSESETEV 152
Query: 158 LQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDY 217
L++LS + + VV G GAV N +R GI+++++VPLD +AR + ++
Sbjct: 153 LKQLSSMGRLVVCAGNGAVQSKTNLALLRHGISLWIDVPLDIVARDV----------IED 202
Query: 218 DSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQ 277
S + + L AL + + YA ADA +SL +A+ +G ++ DIT +A+E L +
Sbjct: 203 QSQFAAFEEVNELGALYNKYKDGYATADAIISLQKVASRLGYDNLDDITKEDMALEALRE 262
Query: 278 AQKYLNSKR 286
+K K+
Sbjct: 263 IEKLTRVKK 271
>gi|428226691|ref|YP_007110788.1| shikimate kinase [Geitlerinema sp. PCC 7407]
gi|427986592|gb|AFY67736.1| shikimate kinase [Geitlerinema sp. PCC 7407]
Length = 194
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 93/162 (57%), Gaps = 9/162 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
V S L G L+L+GMMG+GK+TVG +L+ L Y F D+D +E+ G SV QIF ESGE
Sbjct: 3 VTSILKGVNLYLIGMMGAGKSTVGRLLASRLGYHFFDTDALIEQATG-QSVRQIFAESGE 61
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
A FR+ ES+ L +L +++TGGG V P NW ++R G+ V+L+VP+D L R+
Sbjct: 62 AIFRQLESQVLAQLCAQKNLLISTGGGIVTTPFNWSYLRHGVVVWLDVPVDTLYERLRRD 121
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
G PLL L+ L +R YA AD +S
Sbjct: 122 G--DRPLLQTPD------PLQTLTDLLAQRERLYAQADLRLS 155
>gi|384246912|gb|EIE20400.1| SKI-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 235
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 102/179 (56%), Gaps = 7/179 (3%)
Query: 78 KWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTS 137
++L KA EV L+G L+LVGMMGSGK+TVG+IL+ AL Y + D D +EK M G S
Sbjct: 22 RFLAKALAAEVMELLEGTSLYLVGMMGSGKSTVGKILASALKYPYLDCDTLIEK-MAGCS 80
Query: 138 VAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPL 197
VA+IF E GE FRE ES+ L +L VV+TGGG VV NW +M+ G+ ++L P
Sbjct: 81 VAEIFSEEGEESFRELESQVLHELMPFKAVVVSTGGGVVVSKQNWGYMQHGVVIWLTGPP 140
Query: 198 DALARRIAAVGTDSFPLLDYDSA------DSYTKAFTALSALSKERSEAYANADATVSL 250
+ L+RR GT S PLL SA D Y L + +R Y AD + L
Sbjct: 141 ELLSRRALRDGTQSRPLLSQSSAGSDEGDDEYAATVAKLQDILDKRRHMYEQADLHIPL 199
>gi|443478875|ref|ZP_21068568.1| shikimate kinase [Pseudanabaena biceps PCC 7429]
gi|443015775|gb|ELS30595.1| shikimate kinase [Pseudanabaena biceps PCC 7429]
Length = 185
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 97/157 (61%), Gaps = 8/157 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L+G +FLVGMMG+GK+T+G++L+ L Y F D+D +E+ G S+ IF GE FR
Sbjct: 2 LNGTNIFLVGMMGAGKSTIGKLLAQKLSYNFVDTDPLIEQC-AGKSITDIFTHDGEDLFR 60
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ E + L ++S + VVATGGG V+R LNW + GI V+++VP+D L R+ A +++
Sbjct: 61 DLEQQVLSQVSSYTRLVVATGGGIVLRSLNWSHLHDGIVVWIDVPVDVLHERLKA-ESEN 119
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
PLL ++ L+ + ++R + YA AD ++
Sbjct: 120 RPLLQTEN------PLQKLTDIYEQRRDRYAQADISI 150
>gi|443324667|ref|ZP_21053405.1| shikimate kinase [Xenococcus sp. PCC 7305]
gi|442795735|gb|ELS05084.1| shikimate kinase [Xenococcus sp. PCC 7305]
Length = 187
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 95/160 (59%), Gaps = 15/160 (9%)
Query: 89 ASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEA 148
++ L G ++L+GMMGSGK+T+G+IL+ L+Y F D+D +EK+ T + +IF GEA
Sbjct: 15 STLLKGVNVYLIGMMGSGKSTIGKILAQKLNYRFFDTDVLIEKVAQKT-IPEIFATEGEA 73
Query: 149 YFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVG 208
YFR+ E+K L ++S V+ATGGG + + +NW F+RQG+ V+L+ LD L R+A
Sbjct: 74 YFRDLETKVLHEVSAYNHSVIATGGGMIQKTVNWSFLRQGLIVWLDADLDVLLERVA--- 130
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
D+ L +L ++RS YA AD +
Sbjct: 131 -----------KDTNRPLAGKLQSLLEKRSSLYAQADLRI 159
>gi|307109411|gb|EFN57649.1| hypothetical protein CHLNCDRAFT_34609 [Chlorella variabilis]
Length = 263
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
EV L G LFLVGMMGSGK+TVG+++S AL Y F D+D +E+L V++IF E G
Sbjct: 100 EVVEGLQGTSLFLVGMMGSGKSTVGKLISQALGYCFFDTDTLIEQL-SQKKVSEIFAEDG 158
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAA 206
E FRE E++ L +LS VVATGGG + NW M+ G++V+LN P LA R+
Sbjct: 159 EESFRELETQVLAELSPFKNCVVATGGGVPTKAENWGHMQGGVSVWLNGPPTLLAHRVVG 218
Query: 207 VGTDSFPLL 215
GT+S PLL
Sbjct: 219 DGTESRPLL 227
>gi|384247569|gb|EIE21055.1| shikimate kinase, partial [Coccomyxa subellipsoidea C-169]
Length = 178
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 82/122 (67%), Gaps = 1/122 (0%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
LDG L+LVGMMGSGK+TVG++++ AL+Y + DSDK +E+ G T VAQIF GE FR
Sbjct: 1 LDGSSLYLVGMMGSGKSTVGKMVAAALEYPYVDSDKLIEERAGCT-VAQIFAAQGEQAFR 59
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ ES LQ+L+ +V+TGGG V R NW MR G+ ++L P + LA+R + GT S
Sbjct: 60 DLESSVLQELAASKAVMVSTGGGVVTREQNWESMRHGLVIWLTGPPELLAKRAVSDGTQS 119
Query: 212 FP 213
P
Sbjct: 120 RP 121
>gi|67922250|ref|ZP_00515764.1| Shikimate kinase [Crocosphaera watsonii WH 8501]
gi|416389334|ref|ZP_11685333.1| Shikimate kinase I (AroE I) [Crocosphaera watsonii WH 0003]
gi|67855953|gb|EAM51198.1| Shikimate kinase [Crocosphaera watsonii WH 8501]
gi|357264243|gb|EHJ13156.1| Shikimate kinase I (AroE I) [Crocosphaera watsonii WH 0003]
Length = 188
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 107/180 (59%), Gaps = 10/180 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G +FLVGMMG+GKTTVG+ L+ L+Y F DSD VEK+ G T + IF GE FR
Sbjct: 7 LQGVNVFLVGMMGTGKTTVGQNLAQRLNYRFFDSDVLVEKVTGQT-INDIFATQGEETFR 65
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ E++ L +L+ + V+ATGGG+V++P NW ++ G+ V+L+V L L +R+A T
Sbjct: 66 QLETQVLSELASCTKSVIATGGGSVLKPKNWSYLHHGLIVWLDVSLPILTQRLAKDTTR- 124
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL-LNLAACIGLKDVLDITPTTI 270
PLL T L +LS++R+ YA +D + + A ++ +L++ PT I
Sbjct: 125 -PLL------QTTDLSLKLQSLSEQRNPLYAQSDLRIIIDREQTADDTVEQILELIPTVI 177
>gi|358249076|ref|NP_001239733.1| uncharacterized protein LOC100781076 [Glycine max]
gi|255640183|gb|ACU20382.1| unknown [Glycine max]
Length = 289
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 119/206 (57%), Gaps = 3/206 (1%)
Query: 81 LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQ 140
+K K EV+S L G +FLVG+ S KT++G++L+DAL Y + DSD VE+ +GG A+
Sbjct: 78 VKKKAAEVSSELKGTSIFLVGLKSSFKTSLGKLLADALRYYYFDSDNLVEEAVGGALAAK 137
Query: 141 IFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDAL 200
F+ES E F E E++ L++LS + + VV G GAV N +R GI+++++VPLD +
Sbjct: 138 SFRESDEKGFYECETEVLKQLSSMGRLVVCAGNGAVTSSTNLALLRHGISLWIDVPLDFV 197
Query: 201 ARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLK 260
AR + F + + SY + L AL YA ADA +S+ +A+ +G
Sbjct: 198 ARDVIE-DQSQFAPSELSISGSYPE--DELGALYDRYRVGYATADAIISVQKVASRLGCD 254
Query: 261 DVLDITPTTIAMEVLVQAQKYLNSKR 286
++ +IT +A+E L + +K K+
Sbjct: 255 NLDEITREDMALEALGEIEKLTRVKK 280
>gi|224129236|ref|XP_002328924.1| shikimate kinase [Populus trichocarpa]
gi|222839354|gb|EEE77691.1| shikimate kinase [Populus trichocarpa]
Length = 286
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 119/211 (56%), Gaps = 6/211 (2%)
Query: 76 DGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGG 135
D +K + +++ L G +FL+GM G KT +G++L+DAL Y F +SD VE+ GG
Sbjct: 73 DTSLQVKKRAADLSPELKGTSIFLLGMRGPLKTNLGKLLADALRYYFFNSDSLVEEAAGG 132
Query: 136 TSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNV 195
A+ KE E FRE E++ L++L+ + + VV G GAV N +R GI+++++V
Sbjct: 133 EFAARSLKERDEKGFRESETEVLKQLTSMGRLVVCAGDGAVQSSTNLGLLRHGISLWIDV 192
Query: 196 PLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAA 255
PLD +AR + T +++S+++ + A +E YA ADA +SL N+A
Sbjct: 193 PLDIVARGVVEDKT------QLAASESHSEVLEQVVATYEELRAGYATADAKISLQNIAV 246
Query: 256 CIGLKDVLDITPTTIAMEVLVQAQKYLNSKR 286
+G ++ +T +A+EVL + +K K+
Sbjct: 247 KLGYDELDSVTTEDLALEVLKEIEKLTRVKK 277
>gi|113475204|ref|YP_721265.1| shikimate kinase [Trichodesmium erythraeum IMS101]
gi|110166252|gb|ABG50792.1| shikimate kinase [Trichodesmium erythraeum IMS101]
Length = 184
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 106/196 (54%), Gaps = 20/196 (10%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G L+LVGMMG+GKTTVG +L+ L Y+F D+D + + G S+ +IF GEA FR
Sbjct: 9 LQGVNLYLVGMMGAGKTTVGHLLAQHLGYSFLDTDNLITQ-AAGKSINEIFATEGEAAFR 67
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
E E+ L ++S +ATGGG V+ NW ++R GI V+L+VP++ L R+ G +
Sbjct: 68 ELETNILSEISSYKNLTIATGGGIVISRFNWSYLRHGIVVWLDVPVEVLYSRLQ--GDQT 125
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIA 271
PL+ + L A+ +ER Y AD V++ D+ D TP +
Sbjct: 126 RPLI------QNSNPLARLQAILEERRPFYNCADVHVNV----------DIQD-TPQQVT 168
Query: 272 MEVLVQAQKYLNSKRR 287
+ L + +K L S +R
Sbjct: 169 ILTLEEIKKVLKSSQR 184
>gi|428775242|ref|YP_007167029.1| shikimate kinase [Halothece sp. PCC 7418]
gi|428689521|gb|AFZ42815.1| shikimate kinase [Halothece sp. PCC 7418]
Length = 182
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 98/162 (60%), Gaps = 9/162 (5%)
Query: 89 ASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEA 148
A L G L+L+GMMG GKT VG+ ++ L Y F D+D+ + ++ G ++ +IF ++GE
Sbjct: 7 ADLLQGLNLYLIGMMGVGKTAVGQAVAQQLTYRFFDTDELITRVQG-QAITEIFAKAGED 65
Query: 149 YFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVG 208
YFRE E+K LQ+LS + V+ATGGG +++ NW F++QG+ V+L+ LD + R+A
Sbjct: 66 YFRELETKVLQELSAYARSVIATGGGIILQNQNWSFLQQGLVVWLDADLDLIMERLAE-- 123
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
S PLL ++ L+ L +R + YA AD + +
Sbjct: 124 DQSRPLLQTENPRQ------TLADLLDQRRDRYAQADLQIRV 159
>gi|443323785|ref|ZP_21052788.1| shikimate kinase [Gloeocapsa sp. PCC 73106]
gi|442786571|gb|ELR96301.1| shikimate kinase [Gloeocapsa sp. PCC 73106]
Length = 183
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 111/185 (60%), Gaps = 10/185 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G ++LVGMMG+GK+T+G+IL+ L+Y F DSD +E+ + ++ +IF GE FR
Sbjct: 8 LKGINVYLVGMMGTGKSTIGQILAHNLEYRFFDSDTVLER-VAQANITEIFATEGEEVFR 66
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
E E++ L +L + V+ATGGG V++P NW ++ G+ ++L+ P++ L +R+A T
Sbjct: 67 ELETQVLSQLCAYTRSVIATGGGVVLKPKNWSYLHHGLVIWLDAPVELLYQRLAIDQTR- 125
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKD-VLDITPTTI 270
PLL + +D K L++L ++R YA AD +++ + + D +L+ PT +
Sbjct: 126 -PLL--NGSDLLGK----LTSLQEQRRSFYAEADLKITIQSEQTPEAIVDQILEQIPTLL 178
Query: 271 AMEVL 275
+L
Sbjct: 179 KTHIL 183
>gi|428220177|ref|YP_007104347.1| shikimate kinase [Synechococcus sp. PCC 7502]
gi|427993517|gb|AFY72212.1| shikimate kinase [Synechococcus sp. PCC 7502]
Length = 184
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 98/159 (61%), Gaps = 8/159 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
LDG ++L+GMMG+GK+T+G++L+D L+Y F D+D VE T VAQIF ESGE+ FR
Sbjct: 2 LDGTNIYLIGMMGAGKSTIGKLLADRLNYRFVDTDSLVEACTKRT-VAQIFAESGESGFR 60
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ E + L ++S + VVATGGG V+ LNW +R G+ V+L+V + L R+ +
Sbjct: 61 QIEHQVLSEVSAYTRLVVATGGGIVLDRLNWSHLRNGLVVWLDVSMQQLYHRLRS-SHHV 119
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL ++AD L+ L ++R YA AD + +
Sbjct: 120 RPLL--ETAD----PLATLTKLYEQRRSLYAQADVCLVI 152
>gi|119512821|ref|ZP_01631889.1| shikimate kinase [Nodularia spumigena CCY9414]
gi|119462543|gb|EAW43512.1| shikimate kinase [Nodularia spumigena CCY9414]
Length = 192
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 102/173 (58%), Gaps = 9/173 (5%)
Query: 78 KWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTS 137
K L R V+S L G L+L+GMMG+GKTTVG++L+ L Y F D+D + + G S
Sbjct: 2 KLTLTGAKRLVSSLLQGVNLYLIGMMGAGKTTVGQLLAKHLGYGFLDTDSVITQ-SAGRS 60
Query: 138 VAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPL 197
+ Q+F E GEA FR+ ES L ++ + +ATGGG ++R NW ++ G+ V+L+VP+
Sbjct: 61 INQLFAEEGEAAFRQLESDVLAQVCAYTRLTIATGGGIILRTENWSYLHHGLVVWLDVPV 120
Query: 198 DALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
+ L R+A T PLL AD K L +L ++R+ Y+ AD +++
Sbjct: 121 ELLYTRLAEDTTR--PLL--QDADPQGK----LRSLLEQRTPLYSQADLKITV 165
>gi|307155208|ref|YP_003890592.1| shikimate kinase [Cyanothece sp. PCC 7822]
gi|306985436|gb|ADN17317.1| Shikimate kinase [Cyanothece sp. PCC 7822]
Length = 183
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 96/162 (59%), Gaps = 11/162 (6%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G +FL+GM G+GKTTVGE+L++ L Y F DSD +E++ G T V +IF GE
Sbjct: 4 NLLKGVSIFLIGMPGTGKTTVGELLAEKLGYRFFDSDVLIERVSGNT-VNEIFNTLGEEA 62
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FR+ ES+ L +L + ++ATGGG V++ +NW ++R G+ ++L+ P+D L +R+ T
Sbjct: 63 FRKIESQVLSELCSYTKSIIATGGGIVIKQMNWSYLRHGLIIWLDSPVDLLIQRLKEDST 122
Query: 210 DSFPLL-DYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL D D L +L +R Y AD +S+
Sbjct: 123 R--PLLRDVDLEQK-------LQSLWTQRRPLYKQADLQISI 155
>gi|33239580|ref|NP_874522.1| shikimate kinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|81665111|sp|Q7VE85.1|AROK_PROMA RecName: Full=Shikimate kinase; Short=SK
gi|33237105|gb|AAP99174.1| Shikimate kinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 190
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 100/170 (58%), Gaps = 9/170 (5%)
Query: 82 KAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQI 141
K + +V L G+ ++LVGMMGSGK+T G L+ L Y+F D D+ +EK + +SV+QI
Sbjct: 4 KLRPNQVIKKLGGRIIYLVGMMGSGKSTTGPHLAKLLKYSFIDQDELIEK-VAKSSVSQI 62
Query: 142 FKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALA 201
F+E GE FR+ E++ L+++ VVATGGG V R NW + QGI ++L+ + L
Sbjct: 63 FREEGENGFRDIETQVLKQIGQRHSLVVATGGGLVTRSENWGVLHQGIVIWLDPNRELLF 122
Query: 202 RRIAAVGTDSFPLLD-YDSADSYTKAFTALSALSKERSEAYANADATVSL 250
R+ + T PLLD D D L +L K+R +YA AD +S+
Sbjct: 123 ARLKSDKTVVRPLLDNKDPKD-------VLDSLIKQRYLSYAEADLHISI 165
>gi|428319260|ref|YP_007117142.1| shikimate kinase [Oscillatoria nigro-viridis PCC 7112]
gi|428242940|gb|AFZ08726.1| shikimate kinase [Oscillatoria nigro-viridis PCC 7112]
Length = 183
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 90/157 (57%), Gaps = 9/157 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G ++LVGMMG+GKTTVG IL+ L Y F D+D+ + ++ S+A+IF GE FR
Sbjct: 4 LRGVNIYLVGMMGAGKTTVGRILAKKLKYRFFDTDELIVRVTN-QSIAEIFDREGEEAFR 62
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
E E+K L +LS VVATGGG V R +NW ++ G+ V+L+VP+D L R+ + +
Sbjct: 63 ELETKVLGELSAYKNSVVATGGGIVTRSMNWGYLHYGVVVWLDVPVDQLYDRLRS--DTA 120
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
PLL S L +L ER Y AD V
Sbjct: 121 RPLLQEGEIKS------KLQSLLNERERLYTQADVRV 151
>gi|119491298|ref|ZP_01623352.1| shikimate kinase [Lyngbya sp. PCC 8106]
gi|119453462|gb|EAW34624.1| shikimate kinase [Lyngbya sp. PCC 8106]
Length = 193
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L G L+L+GMMG+GKTTVG++L+ +Y F D+D+ + + + G S+ QIF E GE F
Sbjct: 4 LLRGINLYLIGMMGAGKTTVGKLLAKQFNYRFIDTDEVITQ-VAGQSINQIFTEQGEEAF 62
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD 210
R ES+ L L + VVATGGG +++ NW ++R G+ V+L+V + L +R+ T
Sbjct: 63 RTLESQVLSGLCAHQRLVVATGGGIILQRANWGYLRHGLIVWLDVSPEDLYQRLKEDTTR 122
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKD-VLDITPTT 269
PLL +D+ L L K+R YA AD V++ + D +L+ PT
Sbjct: 123 --PLLQHDN------PLGRLQELLKQRESLYAEADVKVTITQHDTPEQVVDHILEKVPTV 174
Query: 270 IAMEVLVQAQKYLN 283
+ E L + LN
Sbjct: 175 LKTESLKPPEYNLN 188
>gi|291569159|dbj|BAI91431.1| shikimate kinase [Arthrospira platensis NIES-39]
Length = 184
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 92/163 (56%), Gaps = 9/163 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
V + G ++L+GMMG+GK+TVGEIL++ L Y F D+D + + + G ++ +IF GE
Sbjct: 2 VLEQIQGINIYLIGMMGAGKSTVGEILANRLSYKFFDTDVLISQ-VSGQAIPEIFSTQGE 60
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
FR ES+ L L VVATGGG V++ +NW ++R GI V+L+VP L R+
Sbjct: 61 EEFRNLESQVLSSLCAYQHLVVATGGGVVIKRMNWSYLRHGIIVWLDVPTHCLYERLK-- 118
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
G + PLL + T L + + R Y AD ++++
Sbjct: 119 GDTTRPLLQHPD------PLTRLDNILETRRHLYQQADISITI 155
>gi|409989186|ref|ZP_11272878.1| shikimate kinase [Arthrospira platensis str. Paraca]
gi|409939933|gb|EKN80923.1| shikimate kinase [Arthrospira platensis str. Paraca]
Length = 204
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 9/159 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
+ G ++L+GMMG+GK+TVGEIL++ L Y F D+D + + + G ++ +IF GE FR
Sbjct: 26 IQGINIYLIGMMGAGKSTVGEILANRLSYKFFDTDVLISQ-VSGQAIPEIFSTQGEEEFR 84
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
ES+ L L VVATGGG V++ +NW ++R GI V+L+VP L R+ G +
Sbjct: 85 NLESQVLSSLCAYQHLVVATGGGVVIKRMNWSYLRHGIIVWLDVPTHCLYERLK--GDTT 142
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL + T L + + R Y AD ++++
Sbjct: 143 RPLLQHPD------PLTRLDNILETRRHLYQQADISITI 175
>gi|428311952|ref|YP_007122929.1| shikimate kinase [Microcoleus sp. PCC 7113]
gi|428253564|gb|AFZ19523.1| shikimate kinase [Microcoleus sp. PCC 7113]
Length = 178
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 92/159 (57%), Gaps = 9/159 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G +FLVGMMG+GKTTVG++L+ L Y+F D+D +EK G S+ QIF + GE FR
Sbjct: 4 LKGINVFLVGMMGTGKTTVGDLLARQLGYSFVDTDNVIEK-AAGKSINQIFADEGEEAFR 62
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ ES+ L LS + VATGGG V++ NW ++ G+ ++L+ P++ L R+ T
Sbjct: 63 QLESEVLSHLSAHTRLTVATGGGIVLKRFNWSYLHHGLVIWLDSPVEVLMARLQNDTTR- 121
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL D+ AL + +R YA AD + +
Sbjct: 122 -PLLQNDNPAQ------ALQTILDQRRNLYAEADLHIQI 153
>gi|427707062|ref|YP_007049439.1| shikimate kinase [Nostoc sp. PCC 7107]
gi|427359567|gb|AFY42289.1| shikimate kinase [Nostoc sp. PCC 7107]
Length = 186
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 95/161 (59%), Gaps = 9/161 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
++S L G L+L+GMMG+GKTTVG +L+ L Y F D+D + K G S+ Q+F E GE
Sbjct: 1 MSSLLQGVSLYLIGMMGAGKTTVGRLLAPQLGYRFVDTDDVIAKATG-RSITQLFAEEGE 59
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
A FR+ ES L ++S VATGGG VVR NW ++R G+ V+L++P++ L R+A
Sbjct: 60 AAFRQLESDVLAQVSAHINLTVATGGGIVVRRENWGYLRHGLIVWLDLPVELLYNRLAED 119
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
T PLL D K L +L ++R Y+ AD +
Sbjct: 120 TTR--PLL--QDPDPQGK----LRSLLEQRQPLYSQADLHI 152
>gi|428779039|ref|YP_007170825.1| shikimate kinase [Dactylococcopsis salina PCC 8305]
gi|428693318|gb|AFZ49468.1| shikimate kinase [Dactylococcopsis salina PCC 8305]
Length = 186
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 105/188 (55%), Gaps = 20/188 (10%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G ++LVG+MG GKT VG+ ++ L+Y F D+D + ++ G ++ IF + GE Y
Sbjct: 8 NLLQGLNIYLVGLMGVGKTAVGKEIAQQLNYRFFDTDDLIIRV-EGKAITDIFAQKGETY 66
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FRE E+K LQ+LS+ + V+ATGGG +++ NW F++QG+ V+L+ D + R+A T
Sbjct: 67 FRELETKVLQELSVCTRSVIATGGGIIMKKENWSFLQQGLVVWLDAKTDLIMERLAEDNT 126
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTT 269
PLL ++ L L +R YA +D +S+ + P+
Sbjct: 127 R--PLLKTENPKQ------TLDDLWWKRRSRYAQSDLQISIERSQS-----------PSE 167
Query: 270 IAMEVLVQ 277
IA EVL+Q
Sbjct: 168 IASEVLMQ 175
>gi|170079112|ref|YP_001735750.1| shikimate kinase [Synechococcus sp. PCC 7002]
gi|169886781|gb|ACB00495.1| shikimate kinase [Synechococcus sp. PCC 7002]
Length = 186
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 101/160 (63%), Gaps = 9/160 (5%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L G ++L+GMMG+GK+T+ EI+++ ++Y DSD +E L S+++IF E GEA F
Sbjct: 4 LLKGLNIYLIGMMGTGKSTLAEIIAELMNYRSLDSDSIIETL-AKQSISEIFAEMGEAEF 62
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD 210
R+ E++ L+++++ + VVATGGG VV NW ++RQG+T++L+VP+ L R+ +
Sbjct: 63 RKLETQVLKQIAVQTRTVVATGGGIVVSQANWYYLRQGLTIWLDVPVPILVERLRS--DT 120
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
S PLL + D K L+ L ++R YA AD + +
Sbjct: 121 SRPLL--QNVDLERK----LTQLLQQRRSRYAEADLHIQI 154
>gi|297818234|ref|XP_002877000.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297322838|gb|EFH53259.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 280
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 126/235 (53%), Gaps = 13/235 (5%)
Query: 52 LVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVG 111
+ P+ D +A S D +D ++K K ++A L G +FLVG+ S KT G
Sbjct: 50 IAPSQSLADQSASTGISVVDSDPID---VVKRKAMDIAPELKGASIFLVGINNSIKTNTG 106
Query: 112 EILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVAT 171
++L++AL Y + DSD + + GG AQ KE+ E F+E E++ L++LS + + VV
Sbjct: 107 KLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAFQESETEVLKQLSSMGRLVVCA 166
Query: 172 GGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALS 231
G GAV N +R GI+++++VPLD IAA G D D +++ + F L
Sbjct: 167 GDGAVQSLTNLALLRHGISIWIDVPLD-----IAAKGDD-----DSFNSEPSPELFDTLK 216
Query: 232 ALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSKR 286
A ++ + Y ADA++SL +A + +D+ + IA+EVL + +K K+
Sbjct: 217 ASYEKSRKGYETADASISLEKIATKLEFEDLEAVASEDIALEVLKEIEKLTRVKK 271
>gi|86607258|ref|YP_476021.1| shikimate kinase [Synechococcus sp. JA-3-3Ab]
gi|115312165|sp|Q2JRJ6.1|AROK_SYNJA RecName: Full=Shikimate kinase; Short=SK
gi|86555800|gb|ABD00758.1| shikimate kinase [Synechococcus sp. JA-3-3Ab]
Length = 189
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 95/164 (57%), Gaps = 8/164 (4%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
E A L G ++L+GMM SGK+T+G L+ L F D+D VE++ G S+AQIF E G
Sbjct: 5 EEAERLRGVTVYLIGMMASGKSTLGAELAAQLRRPFFDTDALVEQV-AGCSIAQIFAEQG 63
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAA 206
EA+FRE E++ L +LS + VVATGGG V+RP NW ++ G+TV+L+ + + +R+
Sbjct: 64 EAHFRELETQVLAQLSGYTRLVVATGGGIVLRPKNWSYLHHGLTVWLDAAPELIWQRLKR 123
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL + AL L +ER YA AD V +
Sbjct: 124 -DPGQRPLLQTPDPQA------ALQRLMQEREPFYAQADVRVPI 160
>gi|126657832|ref|ZP_01728985.1| shikimate kinase [Cyanothece sp. CCY0110]
gi|126620772|gb|EAZ91488.1| shikimate kinase [Cyanothece sp. CCY0110]
Length = 188
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 10/182 (5%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G +FL+GMMG+GKTTVG+ L+ L+Y F D+D +EK + S+ IF GE
Sbjct: 5 NLLQGVNVFLIGMMGTGKTTVGKKLAQRLNYRFFDTDVLIEK-VTKQSITNIFATQGEET 63
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FR+ ES+ L +LS + V+ATGGG V++ +NW ++ G+ ++L+ P+ L +R+A T
Sbjct: 64 FRDLESQVLSELSSCTKSVIATGGGIVLKSINWSYLHHGLIIWLDAPVSVLNKRLAKNTT 123
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKD-VLDITPT 268
PLL T L +L +ER YA +D + + + D +L + PT
Sbjct: 124 R--PLL------QETDLQLKLQSLLEERHSLYAQSDLQIIIDQHQTPNDVVDQILQLVPT 175
Query: 269 TI 270
I
Sbjct: 176 VI 177
>gi|300865613|ref|ZP_07110388.1| shikimate kinase [Oscillatoria sp. PCC 6506]
gi|300336397|emb|CBN55538.1| shikimate kinase [Oscillatoria sp. PCC 6506]
Length = 176
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 105/189 (55%), Gaps = 21/189 (11%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G L+LVGMMG+GKTTVG L+ L Y F D+D + K+ S+++IF GE FR
Sbjct: 4 LRGVNLYLVGMMGAGKTTVGRWLASELGYHFFDTDDVISKV-ANLSISEIFARDGEEAFR 62
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ ES+ L +LS + +VATGGG V+R +NW ++ GI V+L+VP++ L R+ +S
Sbjct: 63 QLESQVLGELSAYKKLIVATGGGIVLRQMNWSYLHHGIVVWLDVPVEELCDRLRE--DNS 120
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIA 271
PLL + +A L + +R YA AD V+ +G + TP +
Sbjct: 121 RPLL----REGEPRAI--LQNILNQRQRFYAQADVRVA-------VGSE-----TPEAVG 162
Query: 272 MEVLVQAQK 280
M V+ + QK
Sbjct: 163 MRVIEELQK 171
>gi|194476762|ref|YP_002048941.1| shikimate kinase [Paulinella chromatophora]
gi|171191769|gb|ACB42731.1| shikimate kinase [Paulinella chromatophora]
Length = 187
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 105/184 (57%), Gaps = 8/184 (4%)
Query: 84 KGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFK 143
K E+ L G ++LVG+MGSGK+T+G+ L+ AL+Y+FAD+D +E G +++ IF
Sbjct: 2 KNSELTKHLQGLNIYLVGIMGSGKSTIGKPLATALNYSFADTDDVLENATG-QNISDIFS 60
Query: 144 ESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARR 203
+GE++FR E K L ++S VVATGGG V+ NW M QGI V+L++ + L +R
Sbjct: 61 VNGESHFRSLEHKVLSEISHYHSLVVATGGGVVINSNNWGIMHQGIVVWLDLAPNILFKR 120
Query: 204 IAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVL 263
+ ++ T PLL +S+ K +L L +R Y AD + N + K +L
Sbjct: 121 L-SIDTKPRPLL----KNSHPKE--SLKILMAKRRSLYGEADIHILSNNHSPDEVAKQIL 173
Query: 264 DITP 267
+ P
Sbjct: 174 EALP 177
>gi|260435091|ref|ZP_05789061.1| shikimate kinase [Synechococcus sp. WH 8109]
gi|260412965|gb|EEX06261.1| shikimate kinase [Synechococcus sp. WH 8109]
Length = 191
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 100/179 (55%), Gaps = 8/179 (4%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ ++LVGMMGSGKT+ G L++ L Y F D+D +E+ G S+ +IF GEA FR
Sbjct: 12 LAGRSIYLVGMMGSGKTSTGRPLAERLGYGFVDADAVIEQ-AAGCSIPEIFDRDGEAGFR 70
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
ES+ L +S VVATGGG V +P NW + GI ++L+V D L +R+ A T
Sbjct: 71 SLESQVLSAISQRHSLVVATGGGVVTQPENWGMLHSGIVIWLDVVPDQLLQRLNADST-V 129
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTI 270
PLL +AD AL AL ER YA AD TV + + + +L + P+ +
Sbjct: 130 RPLL--QTADPE----AALKALLNERRPLYAEADLTVVINDETPEAVAEGILQLVPSLL 182
>gi|209527294|ref|ZP_03275804.1| Shikimate kinase [Arthrospira maxima CS-328]
gi|423066193|ref|ZP_17054983.1| shikimate kinase [Arthrospira platensis C1]
gi|209492282|gb|EDZ92627.1| Shikimate kinase [Arthrospira maxima CS-328]
gi|406712235|gb|EKD07424.1| shikimate kinase [Arthrospira platensis C1]
Length = 194
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 92/163 (56%), Gaps = 9/163 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
V + G ++L+GMMG+GK+TVG+IL++ L Y F D+D + + + G ++ +IF GE
Sbjct: 12 VLEQIQGINIYLIGMMGAGKSTVGQILANRLSYKFFDTDVLISQ-VAGQAIPEIFATQGE 70
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
FR ES+ L L VVATGGG V++ +NW ++R GI V+L+VP L R+
Sbjct: 71 EEFRNLESQVLSSLCAYQHLVVATGGGVVIKRMNWSYLRHGIIVWLDVPTHCLYERLK-- 128
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
G + PLL + T L + + R Y AD ++++
Sbjct: 129 GDTTRPLL------QHPDPLTRLDNILETRRHLYQQADISIAI 165
>gi|148240549|ref|YP_001225936.1| shikimate kinase [Synechococcus sp. WH 7803]
gi|147849088|emb|CAK24639.1| Shikimate kinase [Synechococcus sp. WH 7803]
Length = 191
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ L+LVGMMGSGKT+ G L+ L+Y F D+D +E+ G ++ IFK GE+ FR
Sbjct: 12 LGGRNLYLVGMMGSGKTSTGRPLAQRLEYGFVDADAVIEQ-AAGCTIPDIFKREGESGFR 70
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
E++ L +S VVATGGGAV RP NW M QGI ++L+V L +R+ + T
Sbjct: 71 NLETQVLSAISQRHSLVVATGGGAVTRPENWGAMHQGIVIWLDVEQQRLLKRLESDDTPR 130
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
L + D A AL+ L R YA AD TV +
Sbjct: 131 PLLHEQDPA-------LALNTLLTARRPMYAEADLTVVI 162
>gi|449019708|dbj|BAM83110.1| shikimate kinase [Cyanidioschyzon merolae strain 10D]
Length = 287
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 94/170 (55%), Gaps = 13/170 (7%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G ++LVGMMGSGK+T+G L+ AL+Y F D+D +E+ + S+ +IF + GE FR
Sbjct: 83 LHGASVYLVGMMGSGKSTLGAYLAKALEYAFIDTDVIIERTLQ-KSIPEIFAQDGEETFR 141
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ ES L+ L + VVATGGG V+R NW + G+ V+LN D LA+R+ G
Sbjct: 142 DVESLVLESLQSHVRTVVATGGGVVLRQRNWGTLHTGLVVYLNGTPDMLAKRVQ--GGAG 199
Query: 212 FPLLD---YDSADSYTKAFTALSALS-------KERSEAYANADATVSLL 251
PLL + ADS A+ ALS ER Y AD TV L
Sbjct: 200 RPLLSNTMHAPADSTIPEPAAIEALSARLAEILSEREHFYRQADVTVELF 249
>gi|172036297|ref|YP_001802798.1| shikimate kinase [Cyanothece sp. ATCC 51142]
gi|354553090|ref|ZP_08972397.1| Shikimate kinase [Cyanothece sp. ATCC 51472]
gi|171697751|gb|ACB50732.1| shikimate kinase [Cyanothece sp. ATCC 51142]
gi|353554920|gb|EHC24309.1| Shikimate kinase [Cyanothece sp. ATCC 51472]
Length = 189
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 101/180 (56%), Gaps = 10/180 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G +FL+GMMG+GKTTVG+ L+ L+Y F DSD +E+ + ++ IF GE FR
Sbjct: 8 LQGVNVFLIGMMGTGKTTVGQKLAQRLNYRFFDSDVLIER-VTQQRISDIFATQGEETFR 66
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
E ES+ L +L+ + V+ATGGG +++P+NW ++ G+ V+L+ P+ L +R+ T
Sbjct: 67 ELESQVLSELASCTKSVIATGGGIILKPINWSYLHHGLIVWLDAPVPILTKRLKKDKTR- 125
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL-KDVLDITPTTI 270
PLL T L +L +ER YA D + + + + +L++ PT I
Sbjct: 126 -PLL------QQTDLSLKLQSLLEERRYLYAQCDLQIIIDEYQTPDDIVEQILELVPTVI 178
>gi|78213853|ref|YP_382632.1| shikimate kinase [Synechococcus sp. CC9605]
gi|124053406|sp|Q3AH55.1|AROK_SYNSC RecName: Full=Shikimate kinase; Short=SK
gi|78198312|gb|ABB36077.1| Shikimate kinase [Synechococcus sp. CC9605]
Length = 199
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 91/157 (57%), Gaps = 8/157 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ L+LVGMMGSGKT+ G L++ L Y F D+D +E+ G S+ +IF+ G+A FR
Sbjct: 20 LSGRSLYLVGMMGSGKTSTGRPLAERLGYGFVDADAVIEQ-AAGCSIPEIFERDGDAGFR 78
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
ES+ L +S VVATGGG V +P NW + GI ++L+V D L +R+ A T
Sbjct: 79 SLESQVLSAISQRHSLVVATGGGVVTQPENWGLLHSGIVIWLDVVPDQLLQRLNADST-V 137
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
PLL T +L+AL ER Y+ AD TV
Sbjct: 138 RPLL------QTTDPEASLNALLNERRPLYSEADLTV 168
>gi|220908896|ref|YP_002484207.1| shikimate kinase [Cyanothece sp. PCC 7425]
gi|219865507|gb|ACL45846.1| Shikimate kinase [Cyanothece sp. PCC 7425]
Length = 169
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 102/171 (59%), Gaps = 13/171 (7%)
Query: 102 MMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKL 161
MMGSGKT+ ++L+ +L Y + D+D +E+L G SV +IF GE FR++E++ L +L
Sbjct: 1 MMGSGKTSTAKLLAQSLGYRYFDTDTLIEQL-AGCSVREIFARWGEPQFRQWETQVLAEL 59
Query: 162 SLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSAD 221
S V+ATGGG V+ P+NW ++ G+ V+LNVPL+ L++R+ VG + PLL AD
Sbjct: 60 SPYKNLVIATGGGIVLNPINWSYLHHGLVVWLNVPLEELSQRL--VGDRTRPLL----AD 113
Query: 222 SYTKAFTALSALSKERSEAYANADATVSLLN--LAACIGLKDVLDITPTTI 270
+ L L +R YA AD V + + A + L+ VL+ PT +
Sbjct: 114 N---PLERLQTLLDQRRPYYAQADLQVQVRSGESAEQVALR-VLETLPTIL 160
>gi|33866734|ref|NP_898293.1| shikimate kinase [Synechococcus sp. WH 8102]
gi|81573829|sp|Q7U469.1|AROK_SYNPX RecName: Full=Shikimate kinase; Short=SK
gi|33639335|emb|CAE08717.1| Shikimate kinase [Synechococcus sp. WH 8102]
Length = 191
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 103/180 (57%), Gaps = 10/180 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ L+LVGMMGSGKT+ G L++ L Y F D+D +E+ G S+ +IF+ GEA FR
Sbjct: 12 LGGRSLYLVGMMGSGKTSTGRPLAEQLGYGFVDADAVIEQ-AAGCSIPEIFERDGEAGFR 70
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
ES+ L + VVATGGG V + NW + GI V+L+V + L +R+ A T
Sbjct: 71 ALESQVLNAIGQRHSLVVATGGGVVTQQENWGLLHSGIVVWLDVVPEQLMQRLRADST-V 129
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKD-VLDITPTTI 270
PLL + D+ AL+AL +R YA AD TV ++N + + D +L + P+ +
Sbjct: 130 RPLLQTEDPDA------ALNALLNQRRPLYAEADLTV-VINQETPLAVADGILQLLPSLL 182
>gi|148241390|ref|YP_001226547.1| shikimate kinase [Synechococcus sp. RCC307]
gi|254806784|sp|A5GQN5.1|AROK_SYNR3 RecName: Full=Shikimate kinase; Short=SK
gi|147849700|emb|CAK27194.1| Shikimate kinase [Synechococcus sp. RCC307]
Length = 195
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 89/158 (56%), Gaps = 8/158 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G L+LVGMMGSGK+TVG +L+ AL Y F D+D + + G S+ +IF+ GE FR
Sbjct: 14 LQGTNLYLVGMMGSGKSTVGPLLAKALGYRFLDADAVISQ-AAGCSIPEIFERDGEEGFR 72
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ E + LQ+LS VVATGGG V P NW +RQG+ ++L+V + L RR+ A
Sbjct: 73 QLERQVLQQLSQWHSLVVATGGGIVTVPANWGELRQGVVIWLDVAEEELMRRLQA-DPGG 131
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
PLL D L L ++R Y AD VS
Sbjct: 132 RPLLAGDDPAGR------LHGLLEKRQPLYGQADLRVS 163
>gi|88807136|ref|ZP_01122648.1| shikimate kinase [Synechococcus sp. WH 7805]
gi|88788350|gb|EAR19505.1| shikimate kinase [Synechococcus sp. WH 7805]
Length = 191
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 99/180 (55%), Gaps = 10/180 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ L+LVGMMGSGKT+ G L+ L Y F D+D +E+ G ++ +IFK GE+ FR
Sbjct: 12 LGGRNLYLVGMMGSGKTSTGRPLAQRLQYGFVDADAVIEQ-AAGCTIPEIFKRDGESGFR 70
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
E++ L +S VVATGGGAV RP NW M QGI ++L+V L +R+ T
Sbjct: 71 SLETQVLSAISQRHSLVVATGGGAVTRPENWGAMHQGIVIWLDVERQQLLKRLEKDDTPR 130
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKD-VLDITPTTI 270
L + D A AL L R Y+ AD TV +++ + D +L++ PT I
Sbjct: 131 PLLQEQDPA-------MALDRLLMTRRPMYSEADLTV-VIDAEPPDAVADGILNLLPTLI 182
>gi|17228739|ref|NP_485287.1| shikimate kinase [Nostoc sp. PCC 7120]
gi|60389805|sp|Q8YXG9.1|AROK_ANASP RecName: Full=Shikimate kinase; Short=SK
gi|17130591|dbj|BAB73201.1| shikimate kinase [Nostoc sp. PCC 7120]
Length = 181
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 20/188 (10%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
++S L G L+L+GMMG+GKTTVG +L+ L Y F D+D + + S+ +IF E+GE
Sbjct: 1 MSSLLQGVNLYLIGMMGAGKTTVGHLLAKELGYGFLDTDNVIAQATK-KSINEIFAEAGE 59
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
A FR+ ES L ++ + VATGGG V+R NW ++ G+ ++L+VP+D L R+AA
Sbjct: 60 AGFRQIESDVLAQVCSYTKLTVATGGGIVLRRENWSYLHHGLILWLDVPVDILYARLAAD 119
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITP 267
T PLL D L +L ++R+ Y+ AD L C+ ++ TP
Sbjct: 120 TTR--PLLQDDDPKG------KLRSLLEQRTPLYSQAD-------LRICVNAEE----TP 160
Query: 268 TTIAMEVL 275
IA +V+
Sbjct: 161 EQIANKVM 168
>gi|428306365|ref|YP_007143190.1| shikimate kinase [Crinalium epipsammum PCC 9333]
gi|428247900|gb|AFZ13680.1| shikimate kinase [Crinalium epipsammum PCC 9333]
Length = 184
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 97/160 (60%), Gaps = 11/160 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L+G ++L+GMMG+GKTTVG LS+ L Y F D+D +E++ T + QIF ++GE FR
Sbjct: 2 LNGVNVYLIGMMGAGKTTVGRELSNQLGYRFFDTDTLIEQVASQT-ITQIFTDTGEEGFR 60
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ ES+ L ++S + +ATGGG V++ NW ++ G+ V+L+ P++ L R+A T
Sbjct: 61 KLESQVLSEISAYTKLAIATGGGIVLKRENWSYLHHGLIVWLDAPVELLIERLAQDNTR- 119
Query: 212 FPLL-DYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL D + A+ K L ++R YA AD +S+
Sbjct: 120 -PLLQDVNPAEKLQK-------LLEQRQRLYAQADIKISI 151
>gi|30688547|ref|NP_189325.2| shikimate kinase like 1 [Arabidopsis thaliana]
gi|186510473|ref|NP_001118711.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|186510475|ref|NP_001118712.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|75274423|sp|Q9LW20.1|SKL1_ARATH RecName: Full=Probable inactive shikimate kinase like 1,
chloroplastic; Short=AtSKL1; Flags: Precursor
gi|9279680|dbj|BAB01237.1| unnamed protein product [Arabidopsis thaliana]
gi|45752658|gb|AAS76227.1| At3g26900 [Arabidopsis thaliana]
gi|46402442|gb|AAS92323.1| At3g26900 [Arabidopsis thaliana]
gi|227202866|dbj|BAH56906.1| AT3G26900 [Arabidopsis thaliana]
gi|332643714|gb|AEE77235.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|332643715|gb|AEE77236.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|332643716|gb|AEE77237.1| shikimate kinase like 1 [Arabidopsis thaliana]
Length = 280
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)
Query: 52 LVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVG 111
+ P+ D +A S D +D ++K K ++A L G +FLVG+ S KT G
Sbjct: 50 IAPSRSLADQSASTGISVVDSDPID---VVKRKAMDIAPELKGASIFLVGINNSIKTNTG 106
Query: 112 EILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVAT 171
++L++AL Y + DSD + + GG AQ KE+ E F+E E++ L++LS + + VV
Sbjct: 107 KLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAFQESETEVLKQLSSMGRLVVCA 166
Query: 172 GGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALS 231
G GAV N +R GI+++++VPLD I A G D D ++ + F L
Sbjct: 167 GDGAVQSLRNLALLRHGISIWIDVPLD-----ITAKGDD-----DSFHSEPSPELFDTLK 216
Query: 232 ALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSKR 286
A ++ + Y AD ++SL +A + +D+ +T IA+E+L + +K K+
Sbjct: 217 ASYEKSRKGYETADVSISLEKIATKLEFEDLEAVTSEDIALEILKEIEKLTRVKK 271
>gi|427728049|ref|YP_007074286.1| shikimate kinase [Nostoc sp. PCC 7524]
gi|427363968|gb|AFY46689.1| shikimate kinase [Nostoc sp. PCC 7524]
Length = 183
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 11/166 (6%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
++S L G L+L+GMMG+GKTTVG++L+ L Y F D+D + + S+ QIF E GE
Sbjct: 1 MSSLLQGVNLYLIGMMGAGKTTVGQLLAKQLGYGFIDTDNVIAQ-SAKKSINQIFAEEGE 59
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
A FR+ ES L ++ + VATGGG V+R NW ++ G+ V+L+VP++ L R+A
Sbjct: 60 ATFRQLESDVLGQVCAYTKLTVATGGGIVLRRENWSYLHHGLIVWLDVPVELLYNRLAED 119
Query: 208 GTDSFPLL-DYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
T PLL D D L +L ++R+ YA AD + ++
Sbjct: 120 TTR--PLLQDVDPKGK-------LRSLLEQRTPLYAQADLRIPVIE 156
>gi|254422265|ref|ZP_05035983.1| shikimate kinase domain protein [Synechococcus sp. PCC 7335]
gi|196189754|gb|EDX84718.1| shikimate kinase domain protein [Synechococcus sp. PCC 7335]
Length = 239
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L+L+GMMG+GKTT+G L++ L Y F D+D +E+ T V+++F +GE+ FR+ E++
Sbjct: 43 LYLIGMMGAGKTTIGRKLANRLGYGFVDTDALIEQSANQT-VSELFASAGESVFRQLETQ 101
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLL- 215
L ++S VVATGGG ++ +NW ++ GI ++L+VP+ L R++ G S PL+
Sbjct: 102 VLSQVSTYTNLVVATGGGVIIEQMNWSYLHHGIIIWLDVPIPILVARLS--GDSSRPLIK 159
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
D T L+ L ER + YA AD +
Sbjct: 160 DSRPLIKDTNLSDRLAGLIAERRDLYAQADIRI 192
>gi|317968056|ref|ZP_07969446.1| shikimate kinase [Synechococcus sp. CB0205]
Length = 207
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 100/179 (55%), Gaps = 8/179 (4%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L+G L+LVGMMGSGK++VG L++ALDY F D+D +E++ G S+ +IF GE FR
Sbjct: 12 LEGLNLYLVGMMGSGKSSVGRHLAEALDYRFLDADTSLEQV-AGRSIPEIFASEGETGFR 70
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
ES L +++ VVATGGG V +P NW + QG+ ++L+ P L R+ A D
Sbjct: 71 ALESAVLNQIASWHSLVVATGGGVVTQPANWGELHQGVVIWLDAPDAILLARLEA---DP 127
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTI 270
P ++ D + L++L ER YA AD + A ++ +L+ P+ I
Sbjct: 128 TPRPLMEAEDRAER----LASLMAERRPLYAQADLQILQDGRPAEQVVQQILEALPSII 182
>gi|376003244|ref|ZP_09781058.1| shikimate kinase I [Arthrospira sp. PCC 8005]
gi|375328404|emb|CCE16811.1| shikimate kinase I [Arthrospira sp. PCC 8005]
Length = 194
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 90/163 (55%), Gaps = 9/163 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
V + G ++L+GMMG+GK+TVG+IL++ L Y F D+D + + + G ++ +IF GE
Sbjct: 12 VLEQIQGINIYLIGMMGAGKSTVGQILANRLSYKFFDTDVLISQ-VAGQAIPEIFATQGE 70
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
FR ES+ L L VVATGGG V++ NW ++R GI V+L+VP L R+
Sbjct: 71 EEFRNLESQVLSSLCAYQHLVVATGGGVVIKRTNWSYLRHGIIVWLDVPTHCLYERLK-- 128
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
G + PLL + T L + + R Y AD +++
Sbjct: 129 GDTTRPLL------QHPDPLTRLDNILETRRHLYQQADIYIAI 165
>gi|428209800|ref|YP_007094153.1| shikimate kinase [Chroococcidiopsis thermalis PCC 7203]
gi|428011721|gb|AFY90284.1| shikimate kinase [Chroococcidiopsis thermalis PCC 7203]
Length = 185
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 95/161 (59%), Gaps = 9/161 (5%)
Query: 89 ASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEA 148
+ L G L+LVGMMG+GKTT+G+IL+ L Y F D+D +E+L S+ QIF E GE
Sbjct: 4 SDLLKGINLYLVGMMGAGKTTIGKILAAQLGYGFVDTDAVIEQLTQ-KSINQIFAEKGET 62
Query: 149 YFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVG 208
FR+ E+K L ++ + ++TGGG V+R NW ++ G+ V+L+VP++ L R+A
Sbjct: 63 TFRQIETKVLSEVCAYTRLAISTGGGIVLRRENWSYLHYGLIVWLDVPVEQLYSRLAE-- 120
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
++ PLL D K L +L ER YA AD ++
Sbjct: 121 DNTRPLL--QDPDPIGK----LRSLLDERRSLYAEADLHIT 155
>gi|427416801|ref|ZP_18906984.1| shikimate kinase [Leptolyngbya sp. PCC 7375]
gi|425759514|gb|EKV00367.1| shikimate kinase [Leptolyngbya sp. PCC 7375]
Length = 188
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 9/158 (5%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L G L+LVGMMGSGKTT+G+ L+ L+Y F D+D + + G S+ IF GEA F
Sbjct: 5 LLKGTNLYLVGMMGSGKTTIGKHLAKLLNYRFIDTDDVIVQATG-QSINDIFAAQGEAAF 63
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD 210
R+ E++ L +++ V+ATGGG V++ NW +++ G+ V++NV +D L R++
Sbjct: 64 RDIETQVLGQVAPYTHTVIATGGGMVIKQQNWSYLQSGLVVWINVAVDELIARLSR--DK 121
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
S PLL D K L+ L ++R YA ADATV
Sbjct: 122 SRPLL--KEGDLRHK----LTTLLEQRQARYAQADATV 153
>gi|332711887|ref|ZP_08431817.1| shikimate kinase [Moorea producens 3L]
gi|332349215|gb|EGJ28825.1| shikimate kinase [Moorea producens 3L]
Length = 182
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G +FL+GMMG+GKTTVG +L+ L Y F D+D +E++ G T + +IF E GE FR
Sbjct: 5 LKGINVFLIGMMGAGKTTVGGLLASELGYGFCDTDALIEQIAGKT-INEIFAEDGEETFR 63
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRI 204
+ E++ L +LS Q +VATGGG V++P NW ++ G+ V+L+VP+ L R+
Sbjct: 64 QLETQVLSQLSAYQQLIVATGGGIVLKPQNWSYLHYGLVVWLDVPVAMLIERL 116
>gi|116073893|ref|ZP_01471155.1| shikimate kinase [Synechococcus sp. RS9916]
gi|116069198|gb|EAU74950.1| shikimate kinase [Synechococcus sp. RS9916]
Length = 201
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 98/181 (54%), Gaps = 8/181 (4%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
S L G+ L+LVGMMGSGK++ G L+ L Y F D+D +E++ G + QIF E GE
Sbjct: 14 SRLGGRNLYLVGMMGSGKSSSGRPLAQQLGYGFVDADPVIEQVAG-RPIPQIFSEDGEDG 72
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FR E++ LQ + VVATGGG V +P NW + QGI ++LN D L R+ T
Sbjct: 73 FRAIEAQVLQAIGQRHSLVVATGGGVVTKPENWGVLHQGIVIWLNPGRDRLLARLQNDST 132
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTT 269
PLL +S AL AL + R+ Y+ AD +S+ + + VLD P+
Sbjct: 133 QR-PLLQTES------PAEALDALLEARTPLYSEADLQLSVGDQSPEQVATMVLDALPSI 185
Query: 270 I 270
+
Sbjct: 186 L 186
>gi|298490902|ref|YP_003721079.1| shikimate kinase ['Nostoc azollae' 0708]
gi|298232820|gb|ADI63956.1| Shikimate kinase ['Nostoc azollae' 0708]
Length = 181
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 20/196 (10%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G L+L GMMG GKTTVG +L+ L Y F D+D + K G S+ +IF E GEA FR
Sbjct: 5 LKGVNLYLTGMMGVGKTTVGHLLAHQLGYGFIDTDDVIVK-AAGKSINEIFTEEGEAAFR 63
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ ES L ++ + +ATGGG V+R NW +MR G+ V+L+ P+ L R+ D+
Sbjct: 64 QLESDVLGQVCAYTKLTIATGGGIVLRRENWGYMRHGLIVWLDAPVQILLNRLGE--DDT 121
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIA 271
PLL +D K ++ L ++R Y+ AD +++ + + TP IA
Sbjct: 122 RPLL--QDSDPEGKLYSLL----QQRQPLYSQADLHITITD-----------NQTPEEIA 164
Query: 272 MEVLVQAQKYLNSKRR 287
++ + L ++ +
Sbjct: 165 TRIIEAIPRVLKTQHQ 180
>gi|428773167|ref|YP_007164955.1| shikimate kinase [Cyanobacterium stanieri PCC 7202]
gi|428687446|gb|AFZ47306.1| shikimate kinase [Cyanobacterium stanieri PCC 7202]
Length = 184
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 94/160 (58%), Gaps = 9/160 (5%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L G ++L+GMMGSGK+TVG+ L+ L Y F D+D +E L S+ +IF+E GE F
Sbjct: 4 LLRGLNVYLIGMMGSGKSTVGKFLAHKLAYRFLDTDNTIETLTQ-KSINKIFEEDGEEVF 62
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD 210
R E++ L ++S V++TGGG V++ NW +R G+ ++L+VP+D L +R+
Sbjct: 63 RTLENQVLAQVSSYLHTVISTGGGIVLKKDNWAHLRDGMVIWLDVPVDVLVQRLK--DDR 120
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
S PLL D K T L+ +R YA AD T+++
Sbjct: 121 SRPLL--KETDLQEKLTTILA----QRKHLYAQADLTITI 154
>gi|75906776|ref|YP_321072.1| shikimate kinase [Anabaena variabilis ATCC 29413]
gi|115312135|sp|Q3MFQ9.1|AROK_ANAVT RecName: Full=Shikimate kinase; Short=SK
gi|75700501|gb|ABA20177.1| shikimate kinase [Anabaena variabilis ATCC 29413]
Length = 181
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 105/188 (55%), Gaps = 20/188 (10%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
++S L G L+L+GMMG+GKTTVG +L+ L Y F D+D + + S+ +IF E+GE
Sbjct: 1 MSSLLQGVNLYLIGMMGAGKTTVGHLLAQELGYGFLDTDNVIAQ-AAKKSINEIFAEAGE 59
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
A FR+ ES L ++ + VATGGG V+R NW ++ G+ V+L+V +D L R+AA
Sbjct: 60 AGFRQIESDVLAQVCSYTKLTVATGGGIVLRRENWSYLHHGLIVWLDVSVDILYARLAAD 119
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITP 267
T PLL D L +L ++R+ Y+ AD L C+ ++ TP
Sbjct: 120 TTR--PLLQDDDPKG------KLRSLLEQRTPLYSQAD-------LRICVNAEE----TP 160
Query: 268 TTIAMEVL 275
IA +++
Sbjct: 161 EQIANKIM 168
>gi|440682487|ref|YP_007157282.1| shikimate kinase [Anabaena cylindrica PCC 7122]
gi|428679606|gb|AFZ58372.1| shikimate kinase [Anabaena cylindrica PCC 7122]
Length = 184
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 97/163 (59%), Gaps = 9/163 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+++ L G L+L+GMMG GKTTVG +L+ L Y F D+D + K G S+ +IF + GE
Sbjct: 1 MSNLLRGVNLYLIGMMGVGKTTVGRLLAKELGYGFLDTDDVIVK-AAGKSINEIFVDEGE 59
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
A FR+ ES L ++ + +ATGGG V+R NW ++R G+ V+L+ P++ L R+A
Sbjct: 60 AEFRQLESDVLAQVCAYTKLTIATGGGIVLRRENWGYLRHGLIVWLDAPVEILLNRLAE- 118
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
D+ PLL +D K L +L ++R Y+ AD +++
Sbjct: 119 -DDTRPLL--QDSDPEGK----LRSLLEQRQSLYSQADLHITI 154
>gi|78183927|ref|YP_376362.1| shikimate kinase [Synechococcus sp. CC9902]
gi|124053405|sp|Q3B009.1|AROK_SYNS9 RecName: Full=Shikimate kinase; Short=SK
gi|78168221|gb|ABB25318.1| shikimate kinase [Synechococcus sp. CC9902]
Length = 191
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 97/179 (54%), Gaps = 8/179 (4%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ ++L+GMMGSGKT+ G L+ L Y F D+D +E++ G T + +IF+ GEA FR
Sbjct: 12 LSGRSIYLIGMMGSGKTSTGRPLAKRLGYGFVDADAVIEQVAGCT-IPEIFERDGEAGFR 70
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
ES+ L +S VVATGGG V +P NW + GI V+L+V L R+ T
Sbjct: 71 SIESQVLNAISQRHSLVVATGGGVVTKPENWGQLHSGIVVWLDVNRAQLIERLRDDSTQR 130
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTI 270
PLL + ++ AL L +ER Y AD TV + + + +L + PT I
Sbjct: 131 -PLLQQPNPEA------ALDTLLQERRPLYGEADLTVVIKDESPDAVADGILQLLPTLI 182
>gi|37522279|ref|NP_925656.1| shikimate kinase [Gloeobacter violaceus PCC 7421]
gi|81709329|sp|Q7NH27.1|AROK_GLOVI RecName: Full=Shikimate kinase; Short=SK
gi|35213279|dbj|BAC90651.1| shikimate kinase [Gloeobacter violaceus PCC 7421]
Length = 177
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 8/166 (4%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G L+LVGMMGSGK+TVG +L++ L Y F D D +E+ + G V +IF+ GEA FR
Sbjct: 2 LKGVSLYLVGMMGSGKSTVGRLLAEKLGYGFVDLDALIEQ-VSGKRVGEIFEREGEAVFR 60
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ ES+ L ++S + VVATGGG V+ NW ++ G+ V+L+ ++ L R+ +
Sbjct: 61 DLESRVLAEVSAYTRLVVATGGGVVLARRNWGYLHHGVVVWLDADIETLLGRVEHE-PGT 119
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACI 257
PLL D + + L L ER+ YA AD VS L +
Sbjct: 120 RPLL--AGGDRHLR----LVELLGERARLYAQADVRVSAAGLPPAV 159
>gi|16329403|ref|NP_440131.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|383321144|ref|YP_005381997.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383324314|ref|YP_005385167.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490198|ref|YP_005407874.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384435464|ref|YP_005650188.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|451813562|ref|YP_007450014.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|2492976|sp|P72796.1|AROK_SYNY3 RecName: Full=Shikimate kinase; Short=SK
gi|1651884|dbj|BAA16811.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|339272496|dbj|BAK48983.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|359270463|dbj|BAL27982.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359273634|dbj|BAL31152.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359276804|dbj|BAL34321.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407957278|dbj|BAM50518.1| shikimate kinase [Bacillus subtilis BEST7613]
gi|451779531|gb|AGF50500.1| shikimate kinase [Synechocystis sp. PCC 6803]
Length = 189
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 94/163 (57%), Gaps = 9/163 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+ L G LFL+GMMGSGK+TVG +L++ L Y F D+D +E+ + G ++A IF E GE
Sbjct: 6 IKEQLQGVNLFLIGMMGSGKSTVGPLLAEQLGYRFFDADVLIER-VAGKAIADIFAEDGE 64
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
FR+ E++ L L+ + V+ATGGG V+R NW ++ G+ ++L+ L+ L R+
Sbjct: 65 DTFRDLETEVLGHLAAQTRSVIATGGGVVLRRQNWSYLHHGLVIWLDGSLELLLARLQ-- 122
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
G ++ PLL ++ + L L +R YA AD L
Sbjct: 123 GDEARPLLQVENLEER------LGNLLAQRQPLYAQADLRFPL 159
>gi|297737259|emb|CBI26460.3| unnamed protein product [Vitis vinifera]
Length = 299
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 105/179 (58%), Gaps = 1/179 (0%)
Query: 108 TTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQ 167
+++G++L+DAL Y D+D VE+ GG S A+ KE E FR+ E++ L++LS Q
Sbjct: 82 SSMGKLLADALGYYHFDNDSLVEEACGGESAAKSLKEQDEEEFRDSETEVLKQLSSRGQL 141
Query: 168 VVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAF 227
V G G+V +N +R GI+++++VP++ +A+ + G P+ + +A+SY++
Sbjct: 142 AVCAGNGSVHSSINLALLRHGISIWIDVPIEMVAKNVIEEGVQ-IPVTELSTAESYSETG 200
Query: 228 TALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSKR 286
L + +ER YA ADA+VSL +A+ + D+ +T + MEVL + Q+ K+
Sbjct: 201 AQLVMVYEERKGGYATADASVSLQKVASQLSYDDLDAVTTEDMTMEVLKEIQRLARLKK 259
>gi|254417028|ref|ZP_05030775.1| shikimate kinase [Coleofasciculus chthonoplastes PCC 7420]
gi|196176195|gb|EDX71212.1| shikimate kinase [Coleofasciculus chthonoplastes PCC 7420]
Length = 177
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 9/160 (5%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L G ++L+GMMG GKTTVG+ L+ L Y F D+D +E++ G T + QIF + GE F
Sbjct: 5 LLKGINVYLIGMMGVGKTTVGQRLAKELGYRFVDTDVLIEQVAGQT-INQIFADRGEDEF 63
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD 210
R+ E++ L ++S VATGGG V++ +NW ++ QG+ V+L+ P+D L +R+ T
Sbjct: 64 RQLEAQVLSEVSAYTNLTVATGGGIVLKQMNWSYLHQGLIVWLDAPVDLLIQRLQDDTTR 123
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL T AL L +R YA AD + +
Sbjct: 124 --PLL------QTTDPTAALQNLLDKRRLMYAEADLHIPI 155
>gi|427724186|ref|YP_007071463.1| shikimate kinase [Leptolyngbya sp. PCC 7376]
gi|427355906|gb|AFY38629.1| shikimate kinase [Leptolyngbya sp. PCC 7376]
Length = 186
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 99/160 (61%), Gaps = 9/160 (5%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L G ++L+GMMG+GK+T+ +I+++ ++Y DSD +E+L GTS++ IF E GE F
Sbjct: 4 LLKGLNIYLIGMMGTGKSTLAKIIAEIMNYRVLDSDDIIEQL-AGTSISNIFAEMGEEEF 62
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD 210
R+ E++ L K+++ + VVATGGG ++ NW +++QG+T++L+VP L R+ +
Sbjct: 63 RKLETQVLGKIAVQTRTVVATGGGIILSNDNWYYLQQGLTIWLDVPTPLLMDRLRS--DT 120
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL + D TK L+ L ++R Y AD + +
Sbjct: 121 RRPLL--QNVDLETK----LNELLEQRRSLYNEADLHIQI 154
>gi|412985827|emb|CCO17027.1| shikimate kinase [Bathycoccus prasinos]
Length = 305
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 93/164 (56%), Gaps = 6/164 (3%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L +FL+G+MG+GKTTVG+ L+DAL Y + D+D+ +E++ V +IF+E GE FR
Sbjct: 83 LQSSSVFLLGLMGTGKTTVGKKLADALGYGYFDTDQLIEQICK-QKVHEIFEEDGEEGFR 141
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
E ES L +++ + VV+TGGG V NW + G+TV L LARR+ G +
Sbjct: 142 ETESAILAEVASYKRVVVSTGGGIVTVRNNWMHLHNGVTVCLQGDHRTLARRVHKDGVGA 201
Query: 212 FPLL-----DYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL + D TK + +L ++R + YA D VS+
Sbjct: 202 RPLLKECLSEEDEEAQITKIEEKIQSLWRDRGKMYAECDIAVSV 245
>gi|32488697|emb|CAE03634.1| OSJNBb0003B01.26 [Oryza sativa Japonica Group]
Length = 231
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 102/201 (50%), Gaps = 59/201 (29%)
Query: 74 SLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLM 133
S D +LK K +V L+ +C++LVGMMGSGK
Sbjct: 71 SADEALVLKQKAEDVVPYLNDRCIYLVGMMGSGK-------------------------- 104
Query: 134 GGTSVAQIFKES-GEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVF 192
T+V +I E G ++F + +M++G T++
Sbjct: 105 --TTVGKILAEVLGYSFF------------------------------DRSYMKKGSTIW 132
Query: 193 LNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
L+VPLDALARRIAAVGT S PLL +S D Y KA+ L+AL ++R ++YANADA VSL +
Sbjct: 133 LDVPLDALARRIAAVGTASRPLLHQESGDPYAKAYAKLTALFEQRMDSYANADARVSLEH 192
Query: 253 LAACIGLKDVLDITPTTIAME 273
+A G +V +TP+ IA+E
Sbjct: 193 IAVKQGHSNVTTLTPSAIAIE 213
>gi|428218974|ref|YP_007103439.1| shikimate kinase [Pseudanabaena sp. PCC 7367]
gi|427990756|gb|AFY71011.1| shikimate kinase [Pseudanabaena sp. PCC 7367]
Length = 196
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
S L G LFL+GMMG+GK+TVG++ + L Y F D+D +E G S+ QIF +SGEA
Sbjct: 9 SMLQGVNLFLIGMMGAGKSTVGKLAAQRLGYHFIDTDDTIESY-AGKSIPQIFADSGEAE 67
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FR+ E L ++S VVATGGG VV NW + G+ +L+VP++ L +R+
Sbjct: 68 FRQIEHNVLMQVSAYRNLVVATGGGIVVDRQNWAHLHSGVVAWLDVPIEVLHQRLTK-NN 126
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL + L+ L +R Y AD V++
Sbjct: 127 GKRPLLQVED------PMQRLTNLYNQRLSLYQQADIQVAI 161
>gi|359458945|ref|ZP_09247508.1| shikimate kinase [Acaryochloris sp. CCMEE 5410]
Length = 182
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 89/159 (55%), Gaps = 9/159 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G L+LVGMMG GK+T G L+ L Y F D+D + +L G ++ IF ESGEA+FR
Sbjct: 4 LKGVNLYLVGMMGCGKSTTGRALAQQLGYGFVDTDDLITQLTG-QAITDIFAESGEAHFR 62
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ ESK L +++ + VVATGGG V+ NW F++ G+ ++L+V D L +R+ S
Sbjct: 63 QVESKVLSEVAAHTKLVVATGGGIVLDKKNWSFLQHGLVIWLDVEPDQLWQRLQT--DQS 120
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL + L L +R Y ADA + L
Sbjct: 121 RPLLQKPNPQE------VLEELLTQRRPLYRQADAHIVL 153
>gi|282900529|ref|ZP_06308473.1| Shikimate kinase [Cylindrospermopsis raciborskii CS-505]
gi|281194582|gb|EFA69535.1| Shikimate kinase [Cylindrospermopsis raciborskii CS-505]
Length = 188
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 93/163 (57%), Gaps = 9/163 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+ L G L+L+GMMGSGKTT+G +L+ A++Y+F D+D+ + K G ++ IF GE
Sbjct: 5 IKQLLKGVNLYLIGMMGSGKTTIGNLLAQAVNYSFIDTDEVIVK-AAGKPISDIFITEGE 63
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
FR+ ES L ++ + +ATGGG V+R NW ++ G+ ++L+VP++ L R+
Sbjct: 64 PAFRQLESNVLAQVCAYTKLTIATGGGIVLRRENWSYLHHGLIIWLDVPVEILLERLKED 123
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
T PLL D+ K L +L ER Y+ AD + +
Sbjct: 124 QTR--PLL--QDPDTQNK----LRSLLDERYSLYSQADLHIEI 158
>gi|428297809|ref|YP_007136115.1| shikimate kinase [Calothrix sp. PCC 6303]
gi|428234353|gb|AFZ00143.1| shikimate kinase [Calothrix sp. PCC 6303]
Length = 181
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 93/160 (58%), Gaps = 9/160 (5%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L G L+LVGMMG+GKTT+G +L+ L Y F DSD + K G +++QIF E GE F
Sbjct: 4 LLKGLNLYLVGMMGAGKTTLGRLLAKDLGYGFVDSDDVITK-AAGKNISQIFAEDGEDAF 62
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD 210
R+ ES L +++ + +ATGGG +++ NW ++RQG+ V+L+VP+ L RR+ T
Sbjct: 63 RQLESDVLGQIAAFTRLTIATGGGIILKRENWSYLRQGLVVWLDVPVAELERRLREDTTR 122
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL T L +L + R Y+ +D +++
Sbjct: 123 --PLL------QDTGLEEKLVSLMETRYPLYSQSDLKITI 154
>gi|22298425|ref|NP_681672.1| shikimate kinase [Thermosynechococcus elongatus BP-1]
gi|34222550|sp|Q8DKH7.1|AROK_THEEB RecName: Full=Shikimate kinase; Short=SK
gi|22294604|dbj|BAC08434.1| shikimate kinase [Thermosynechococcus elongatus BP-1]
Length = 183
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 94/184 (51%), Gaps = 20/184 (10%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G ++LVGMMG+GKTT G +L+ L Y+F D+D + + +IF + GE FR
Sbjct: 7 LGGANIYLVGMMGAGKTTTGRLLAQRLGYSFVDTDAVITAFRQ-RPIREIFAQEGEPAFR 65
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
E E + L ++S VVATGGG V+ P+NW ++ GI V+L+VPL L +R+
Sbjct: 66 ELEQQVLAQVSSYHHLVVATGGGIVLNPMNWSYLHHGIVVWLHVPLAVLCQRLRQ--DRE 123
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIA 271
PLL + L L + R YA AD + L+ L+ TP T+
Sbjct: 124 RPLLQEQPLEE------RLGELLQARQHLYAQAD-----------LELRITLEDTPETVC 166
Query: 272 MEVL 275
+L
Sbjct: 167 DRLL 170
>gi|186686317|ref|YP_001869513.1| shikimate kinase [Nostoc punctiforme PCC 73102]
gi|238691206|sp|B2IX35.1|AROK_NOSP7 RecName: Full=Shikimate kinase; Short=SK
gi|186468769|gb|ACC84570.1| shikimate kinase [Nostoc punctiforme PCC 73102]
Length = 181
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 96/163 (58%), Gaps = 9/163 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
++S L G L+L+GMMG GKTTVG +L+ L Y F D D + K S+ Q+F E GE
Sbjct: 1 MSSLLQGVNLYLIGMMGVGKTTVGPLLAKHLGYGFLDLDGVIAKATD-KSINQLFAEEGE 59
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
A FR+ ES L ++ + +ATGGG V+R NW ++ G+ V+L+VP++ + RR+A
Sbjct: 60 AGFRQIESDVLSQVCAFTKLTIATGGGIVLRRENWGYLHHGLIVWLDVPVELIYRRLAED 119
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
T PLL AD K L +L ++R+ Y+ AD +++
Sbjct: 120 TTR--PLL--QDADLKGK----LRSLLEQRTPLYSQADLHITV 154
>gi|124021918|ref|YP_001016225.1| shikimate kinase [Prochlorococcus marinus str. MIT 9303]
gi|254806780|sp|A2C650.1|AROK_PROM3 RecName: Full=Shikimate kinase; Short=SK
gi|123962204|gb|ABM76960.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9303]
Length = 192
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ L+LVGMM SGK++ G L++ L Y F D+D +E+L G + +IF E GE FR
Sbjct: 14 LGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQL-AGQPIPKIFNEEGEEGFR 72
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
ES+ L + VVATGGG V +P NW + QGI ++LN + L RR+ A + +
Sbjct: 73 AMESQVLNAIGQRHSLVVATGGGMVSKPENWGILHQGIVIWLNPGREELFRRLHA-DSGN 131
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL + ++ AF L A ER YA AD V +
Sbjct: 132 RPLLQTEDPEA---AFDCLFA---ERLPLYAEADLRVEV 164
>gi|123965355|ref|YP_001010436.1| shikimate kinase [Prochlorococcus marinus str. MIT 9515]
gi|123199721|gb|ABM71329.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9515]
Length = 185
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 10/164 (6%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ G+ +FL+GMM SGK+ G +L+ L Y + D DK +EK++ T + ++F E GE
Sbjct: 11 KIIKGRSIFLIGMMASGKSQTGPVLAKFLRYKYIDLDKLIEKIVKKT-IIEMFHEDGEEK 69
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FRE E+ L++ +P V++TGGG + +P NW +RQGI ++++ + R+
Sbjct: 70 FRELETNCLKETIKIPSLVISTGGGVIAKPENWGILRQGIIIWIDTKQEIALERLQN-DI 128
Query: 210 DSFPLLD-YDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
D+ PLL D + Y++ F + R Y+ AD V + N
Sbjct: 129 DNRPLLQGKDLKELYSRIFQS-------RKNLYSQADLRVEVDN 165
>gi|33862436|ref|NP_893996.1| shikimate kinase [Prochlorococcus marinus str. MIT 9313]
gi|81578001|sp|Q7V904.1|AROK_PROMM RecName: Full=Shikimate kinase; Short=SK
gi|33640549|emb|CAE20338.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9313]
Length = 192
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ L+LVGMM SGK++ G L++ L Y F D+D +E+L G + +IF E GEA FR
Sbjct: 14 LGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQL-AGQPIPKIFSEEGEAGFR 72
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
ES+ L + VVATGGG V +P NW + QGI ++LN + L RR+ A + +
Sbjct: 73 TMESQVLNAIGQRHSLVVATGGGIVSKPENWGVLHQGIVIWLNPGREELLRRLNA-DSGN 131
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL + ++ AF L A ER Y AD V +
Sbjct: 132 RPLLQTEDPEA---AFDCLFA---ERLPLYCEADLHVEV 164
>gi|282898123|ref|ZP_06306118.1| Shikimate kinase [Raphidiopsis brookii D9]
gi|281197267|gb|EFA72168.1| Shikimate kinase [Raphidiopsis brookii D9]
Length = 167
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 91/163 (55%), Gaps = 9/163 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+ L G L+L+GMMGSGKTT+G +L+ A++Y+F D+D+ + K G ++ IF GE
Sbjct: 5 IKQSLKGVNLYLIGMMGSGKTTIGSLLAQAVNYSFIDTDEVIVK-AAGKPISDIFTTEGE 63
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
FR+ ES L ++ + +ATGGG V+R NW ++ G+ ++L+V ++ L R+
Sbjct: 64 TAFRQLESNVLAQVCAYTKLTIATGGGIVLRRENWSYLHHGLIIWLDVSVEILLERLKED 123
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
T PLL + S L +L ER Y+ AD + +
Sbjct: 124 QTR--PLLQHPDPQS------KLRSLLDERYSLYSQADLHIEI 158
>gi|443313787|ref|ZP_21043397.1| shikimate kinase [Synechocystis sp. PCC 7509]
gi|442776200|gb|ELR86483.1| shikimate kinase [Synechocystis sp. PCC 7509]
Length = 188
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 93/157 (59%), Gaps = 9/157 (5%)
Query: 89 ASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEA 148
++ L G L+L+GMMGSGKTT+G +++ L Y F D+D +E++ S++Q+F E GEA
Sbjct: 7 SNLLKGVNLYLIGMMGSGKTTIGSLIATELGYGFVDTDAVIEQVTK-HSISQLFAEVGEA 65
Query: 149 YFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVG 208
FR+ ES+ L ++ VV+TGGG V + NW ++ G+ V+L+VP+ L R+
Sbjct: 66 EFRQIESQVLAEVCAYTNLVVSTGGGIVTQQKNWSYLHYGLIVWLDVPIKVLYERLKEDN 125
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANAD 245
T PLL +AD K L ++ ++R Y AD
Sbjct: 126 TR--PLL--QAADPLGK----LQSIFEQRQPLYNQAD 154
>gi|113955447|ref|YP_731746.1| shikimate kinase [Synechococcus sp. CC9311]
gi|113882798|gb|ABI47756.1| shikimate kinase [Synechococcus sp. CC9311]
Length = 212
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 11/189 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ L+L+GMMGSGK++ G L+ L Y F D+D VE L G + QIF+ GE FR
Sbjct: 24 LGGRNLYLIGMMGSGKSSTGRPLAQRLGYGFVDADGVVEAL-AGRPIPQIFETDGEQGFR 82
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
ES+ LQ + VVATGGG + +P NW + QGI ++L D L R+ V
Sbjct: 83 TLESQVLQAIGQRHSLVVATGGGVITQPENWGVLHQGIVIWLAPERDQLLARL-LVDPGE 141
Query: 212 FPLL-DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTI 270
PLL ++D A AL A+ + R+ YA AD +++ + + +L+ P +
Sbjct: 142 RPLLQEHDPA-------AALDAILEARTPLYAEADLRITVGDETVNAVTEQILEAIPGIL 194
Query: 271 -AMEVLVQA 278
E++ QA
Sbjct: 195 KPHELMFQA 203
>gi|255631169|gb|ACU15950.1| unknown [Glycine max]
Length = 230
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 31 QTQQHFINLNPLKLKRHRTLNLVPAHVSKDSNAHDVESGTFCDSL---DGKWLLKAKGRE 87
+ Q F+ L R R LN V GT SL D +K K E
Sbjct: 26 KHQNSFLKFPNPNLHRLRRLNC------------SVSDGTVSSSLGATDSSLAVK-KAAE 72
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
V+S L G +FLVG+ S KT++G++L+DAL Y + DSD VE+ +GG VA+ F+ES E
Sbjct: 73 VSSELKGTSIFLVGLKSSLKTSLGKLLADALRYYYFDSDSLVEEAVGGALVAKSFRESDE 132
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
F E E++ L++LS + + VV G G V N +R GI+++++VPLD +AR +
Sbjct: 133 KGFYESETEVLKQLSPMGRLVVCAGNGTVTSSTNLALLRHGISLWIDVPLDFVARDVIE- 191
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
F + + SY + L AL + YA ADA +
Sbjct: 192 DKSQFAPSEISISGSYPE--DELGALYDKYRVGYATADAII 230
>gi|434393629|ref|YP_007128576.1| shikimate kinase [Gloeocapsa sp. PCC 7428]
gi|428265470|gb|AFZ31416.1| shikimate kinase [Gloeocapsa sp. PCC 7428]
Length = 190
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 93/160 (58%), Gaps = 9/160 (5%)
Query: 89 ASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEA 148
++ L G L+LVGMMG+GKTTVG L+ L Y F D+D+ + ++ S++++F SGEA
Sbjct: 8 SNVLKGVNLYLVGMMGTGKTTVGRALATKLGYRFVDTDEIITQVTQ-QSISEVFATSGEA 66
Query: 149 YFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVG 208
FR+ E++ L K+ +ATGGG V++ NW ++ G+ V+L+ P + L+ R++A
Sbjct: 67 AFRQIETQVLAKVCAYTHLAIATGGGIVLQRENWSYLHHGLIVWLDAPTELLSTRLSA-- 124
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
D+ PLL S L + ++R Y+ AD V
Sbjct: 125 DDTRPLLQTGDLRS------QLETILQQRQPLYSQADLRV 158
>gi|352096131|ref|ZP_08957078.1| Shikimate kinase [Synechococcus sp. WH 8016]
gi|351677487|gb|EHA60636.1| Shikimate kinase [Synechococcus sp. WH 8016]
Length = 204
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 89/159 (55%), Gaps = 8/159 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ L+L+GMMGSGK++ G L+ L Y F D+D VE L G + QIF+ GE FR
Sbjct: 16 LGGRNLYLIGMMGSGKSSTGRPLAQRLGYGFVDADGVVEAL-AGRPIPQIFETEGEPGFR 74
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
ES+ LQ + VVATGGG + +P NW + QGI ++L D L R+ A +
Sbjct: 75 ALESQVLQAIGERHSLVVATGGGVITQPENWGVLHQGIVIWLAPGRDQLLARLLA-DPGA 133
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL + ++ AL AL + R+ YA AD +++
Sbjct: 134 RPLLQDQNPEA------ALDALLEARTPLYAEADLRITV 166
>gi|218245814|ref|YP_002371185.1| shikimate kinase [Cyanothece sp. PCC 8801]
gi|226729123|sp|B7JZT6.1|AROK_CYAP8 RecName: Full=Shikimate kinase; Short=SK
gi|218166292|gb|ACK65029.1| Shikimate kinase [Cyanothece sp. PCC 8801]
Length = 187
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 103/184 (55%), Gaps = 10/184 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G ++L+GMMGSGK+T+G+IL+ LDY F D+D +E+ + S+ IF GE FR
Sbjct: 7 LQGINIYLIGMMGSGKSTIGKILAQRLDYRFFDTDILIER-VTQQSINDIFVTQGETVFR 65
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ E++ L +++ + V+ATGGG V+ NW ++ G+ ++L+V + L R+ + +
Sbjct: 66 DIETQVLSEVAACTRSVIATGGGIVLNSQNWSYLHHGLIIWLDVSIKLLKTRL--INDTT 123
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL-LNLAACIGLKDVLDITPTTI 270
PLL +D K L L ++R Y AD T+ + N + ++L+ PT I
Sbjct: 124 RPLL--KESDLTLK----LKTLDEQRRNLYNKADLTIVINQNRTPESIVSEILEAIPTVI 177
Query: 271 AMEV 274
+V
Sbjct: 178 KPKV 181
>gi|159902664|ref|YP_001550008.1| shikimate kinase [Prochlorococcus marinus str. MIT 9211]
gi|254806781|sp|A9BCW6.1|AROK_PROM4 RecName: Full=Shikimate kinase; Short=SK
gi|159887840|gb|ABX08054.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9211]
Length = 197
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
+V L G+ L+LVGMMGSGK+ G +L+ L Y F D D +EK+ S+++IF + G
Sbjct: 9 QVCKKLGGRNLYLVGMMGSGKSRTGPVLAKKLSYGFVDVDDVIEKVTN-QSISEIFDQEG 67
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAA 206
E FRE E++ LQ++ VVATGGG V RP NW + QG+ +++++ + R+ +
Sbjct: 68 EIGFREIETQILQEIGQRHSLVVATGGGIVTRPENWGILHQGVVIWIDLDREIALSRLRS 127
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
T PLL + D++ F KER Y +D +S+
Sbjct: 128 DETPR-PLLQKNLDDNFDCLF-------KERLPIYLESDVHLSV 163
>gi|354568276|ref|ZP_08987441.1| Shikimate kinase [Fischerella sp. JSC-11]
gi|353540639|gb|EHC10112.1| Shikimate kinase [Fischerella sp. JSC-11]
Length = 181
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 94/159 (59%), Gaps = 9/159 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G L+L+GMMG+GK+T+G +L+ L Y F D+D +EK G T + Q+F E GEA FR
Sbjct: 9 LQGINLYLIGMMGAGKSTLGRMLAYELGYGFVDTDNLLEKAAGKT-INQLFTEEGEAAFR 67
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ ES+ L ++ + V+ATGGG V+R NW ++ GI ++L+V ++ L R++ T
Sbjct: 68 QLESEVLAQVCAFTKLVIATGGGIVLRRDNWSYLHHGIIIWLDVAVEILYNRLSEDTTR- 126
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL D K L +L ++R Y AD +++
Sbjct: 127 -PLL--QDTDPQGK----LRSLLEQRQALYNQADLRITI 158
>gi|318042493|ref|ZP_07974449.1| shikimate kinase [Synechococcus sp. CB0101]
Length = 207
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
E+ L+G L+LVGMMGSGK+T G L++ L Y F D+D +E+ + G S+ ++F G
Sbjct: 7 ELRQRLEGLNLYLVGMMGSGKSTAGRHLAELLGYRFLDADSSIEQ-VAGRSIPEVFASEG 65
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAA 206
EA FR+ E+ L +++ VVATGGG V RP NW + QG+ ++L+ P + L R+++
Sbjct: 66 EAGFRQLEAAVLNQIASWHSLVVATGGGVVTRPDNWGQLHQGVVIWLDAPEELLLERLSS 125
Query: 207 VGTDSFPLLDYD 218
T PLL D
Sbjct: 126 DPTPR-PLLQAD 136
>gi|414079234|ref|YP_007000658.1| shikimate kinase [Anabaena sp. 90]
gi|413972513|gb|AFW96601.1| shikimate kinase [Anabaena sp. 90]
Length = 178
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 97/160 (60%), Gaps = 9/160 (5%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L G L+L+GMMG GKTTVG++L+ + Y F D+D+ + K G S+ +IF E+GEA F
Sbjct: 4 ILKGVNLYLIGMMGVGKTTVGKLLAAEIGYRFVDTDEVIIK-AAGKSINEIFAENGEAEF 62
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD 210
R+ ES L + + +++TGGG ++ NW ++ G+ ++L+ P+ + +R+A +
Sbjct: 63 RQLESDVLAQACAYTKLIISTGGGVPMQQQNWSYLHHGLIIWLDAPIGIILQRLAE--DN 120
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
+ PLL AD +K L++L ++R Y+ AD +++
Sbjct: 121 TRPLL--QDADIESK----LTSLWEQRQPMYSQADLHITM 154
>gi|323450494|gb|EGB06375.1| hypothetical protein AURANDRAFT_6341, partial [Aureococcus
anophagefferens]
Length = 165
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 95/159 (59%), Gaps = 14/159 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDAL-DYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
++LVG+MGSGK++VG+ +S L YTF D+D +E+ G T VA IF+ GE+ FR E
Sbjct: 2 VYLVGLMGSGKSSVGDAISRQLGSYTFVDTDGTIEQATGQT-VAAIFESEGESGFRAVEE 60
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS---- 211
+ L +++ + V+ATGGG V NW +RQGI V+L+VP D+LA R+ G+D+
Sbjct: 61 QVLGQVAAYVRLVIATGGGIVTTKANWASLRQGIVVWLDVPTDSLAARL---GSDAERAK 117
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL AD L + ++RSE Y D VSL
Sbjct: 118 RPLL--GPADELE---AKLDGMLEDRSELYGQCDVRVSL 151
>gi|145357115|ref|XP_001422768.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583011|gb|ABP01085.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 170
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 95/167 (56%), Gaps = 5/167 (2%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
VA+ L LFL+G+MGSGK+TVG L+ AL Y D+D+ ++ + T +++F E+GE
Sbjct: 1 VANKLADTSLFLIGIMGSGKSTVGASLAKALGYNHLDTDELIKSVTKKTP-SELFAEAGE 59
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
+ FR ES L +++ + V++TGGG V NW + G+TV L+ + LARR+ A
Sbjct: 60 SEFRAIESMILAEVAAYKRCVISTGGGIVCEKTNWMHLHNGVTVRLHGDSELLARRVLAD 119
Query: 208 GTDSFPLLDYDSADSYTKAFTA----LSALSKERSEAYANADATVSL 250
G + PLL D++ + ++AL + R Y AD TV L
Sbjct: 120 GVEKRPLLSGDTSGEEQPTIDSIVAKINALLETRETMYKQADITVPL 166
>gi|359489964|ref|XP_002269702.2| PREDICTED: shikimate kinase, chloroplastic-like [Vitis vinifera]
Length = 306
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 105/184 (57%), Gaps = 6/184 (3%)
Query: 108 TTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQ 167
+++G++L+DAL Y D+D VE+ GG S A+ KE E FR+ E++ L++LS Q
Sbjct: 84 SSMGKLLADALGYYHFDNDSLVEEACGGESAAKSLKEQDEEEFRDSETEVLKQLSSRGQL 143
Query: 168 VVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYT--- 224
V G G+V +N +R GI+++++VP++ +A+ + G P+ + +A+SY+
Sbjct: 144 AVCAGNGSVHSSINLALLRHGISIWIDVPIEMVAKNVIEEGV-QIPVTELSTAESYSETG 202
Query: 225 --KAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
+ L + +ER YA ADA+VSL +A+ + D+ +T + MEVL + Q+
Sbjct: 203 GNQVLAQLVMVYEERKGGYATADASVSLQKVASQLSYDDLDAVTTEDMTMEVLKEIQRLA 262
Query: 283 NSKR 286
K+
Sbjct: 263 RLKK 266
>gi|71066433|ref|YP_265160.1| shikimate kinase [Psychrobacter arcticus 273-4]
gi|115312164|sp|Q4FQI2.1|AROK_PSYA2 RecName: Full=Shikimate kinase; Short=SK
gi|71039418|gb|AAZ19726.1| shikimate kinase [Psychrobacter arcticus 273-4]
Length = 186
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 78/121 (64%), Gaps = 4/121 (3%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+FLVG MG+GKTT+G +L+ L TF DSD YVE G +A IF + GEA FRE E+
Sbjct: 7 SVFLVGPMGAGKTTIGRLLAKQLGRTFVDSDWYVES-QTGADIAWIFDKEGEAGFRERET 65
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPL 214
+A+ +L+ PQ V+ATGGGAV+ N F++Q GI ++LN P+D R A S PL
Sbjct: 66 RAIDELTQQPQIVLATGGGAVMAAENREFLKQRGIVIYLNAPVDVQMARTAK--DKSRPL 123
Query: 215 L 215
L
Sbjct: 124 L 124
>gi|257058860|ref|YP_003136748.1| shikimate kinase [Cyanothece sp. PCC 8802]
gi|256589026|gb|ACU99912.1| Shikimate kinase [Cyanothece sp. PCC 8802]
Length = 187
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 103/184 (55%), Gaps = 10/184 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G ++L+GMMGSGK+T+G+IL+ LDY F D+D +E+ + S+ IF GE FR
Sbjct: 7 LQGINIYLIGMMGSGKSTIGKILAQRLDYRFFDTDILIER-VTQQSINDIFVTQGETVFR 65
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ E++ L +++ + V+ATGGG V+ NW ++ G+ ++L+V + L R+ + +
Sbjct: 66 DIETQVLSEVAACTRSVIATGGGIVLNSQNWSYLHHGLIIWLDVSIKLLKTRL--INDTT 123
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL-LNLAACIGLKDVLDITPTTI 270
PLL +D K L L ++R Y AD ++ + N + ++L+ PT I
Sbjct: 124 RPLL--KESDLTLK----LKTLDEQRRNLYNKADLSIVINQNRTPESIVSEILEAIPTVI 177
Query: 271 AMEV 274
+V
Sbjct: 178 KPKV 181
>gi|434405733|ref|YP_007148618.1| shikimate kinase [Cylindrospermum stagnale PCC 7417]
gi|428259988|gb|AFZ25938.1| shikimate kinase [Cylindrospermum stagnale PCC 7417]
Length = 184
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 95/164 (57%), Gaps = 11/164 (6%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
++S L G L+L+GMMG GKTTVG +L+ L Y F D+D + + G S+ ++F + GE
Sbjct: 1 MSSLLKGVNLYLIGMMGVGKTTVGRLLAQQLGYGFVDTDNVIVQ-AAGKSINELFADKGE 59
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
A FR+ ES L ++ + +ATGGG V++ NW ++ G+ V+L+ P++ + R+A
Sbjct: 60 AAFRQLESDVLAQVCAFTKLTIATGGGIVLKRENWGYLHHGLIVWLDAPVELILARLAED 119
Query: 208 GTDSFPLL-DYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
T PLL D D D L +L ++R Y+ AD +++
Sbjct: 120 TTR--PLLQDTDPQDK-------LRSLLEQRKPLYSQADLRITV 154
>gi|427718276|ref|YP_007066270.1| shikimate kinase [Calothrix sp. PCC 7507]
gi|427350712|gb|AFY33436.1| shikimate kinase [Calothrix sp. PCC 7507]
Length = 176
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 94/164 (57%), Gaps = 11/164 (6%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
++S L G L+L+GMMG+GKTT+G +L+ L Y F D+D V + G S+ QIF E GE
Sbjct: 1 MSSLLKGVNLYLIGMMGTGKTTIGRLLAQQLSYGFVDTDSIVVQ-AAGKSINQIFAELGE 59
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
A FR+ ES L ++ + +ATGGG +++ NW ++ G+ V+L+ P++ L R+
Sbjct: 60 AAFRQLESDVLAQVCAYTKLTIATGGGIILQRENWGYLHHGLIVWLDAPVELLYTRLLED 119
Query: 208 GTDSFPLL-DYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
T PLL D D L +L ++R+ Y+ AD + +
Sbjct: 120 TTR--PLLQDVDPKGR-------LRSLLEQRTPLYSQADLRIPI 154
>gi|254526222|ref|ZP_05138274.1| shikimate kinase [Prochlorococcus marinus str. MIT 9202]
gi|221537646|gb|EEE40099.1| shikimate kinase [Prochlorococcus marinus str. MIT 9202]
Length = 185
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 89 ASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEA 148
+ G+ +FL+GMMGSGK+ G L++ L Y + D D +EKL S+ QIFK+ GE
Sbjct: 10 VKIIKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLIEKL-AKKSINQIFKDEGED 68
Query: 149 YFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVG 208
FRE E+ L++ +P V++TGGG V +P NW +RQGI ++++ D R+
Sbjct: 69 NFRELEANCLKETIKIPSLVISTGGGIVTKPENWGILRQGIIAWIDLEKDIAIERLKNEI 128
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
+ L + D Y F + R Y+ AD + +
Sbjct: 129 ANRPLLQGKNINDLYMSIFQS-------RENLYSQADLRIQV 163
>gi|308811598|ref|XP_003083107.1| AROK_SYNY3 Shikimate kinase (ISS) [Ostreococcus tauri]
gi|116054985|emb|CAL57062.1| AROK_SYNY3 Shikimate kinase (ISS) [Ostreococcus tauri]
Length = 272
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 94/173 (54%), Gaps = 7/173 (4%)
Query: 84 KGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFK 143
+GR VA L G +FL+G+MG+GK+TVG L+ A+ Y D+D+ ++ + T A++F
Sbjct: 43 RGRAVADKLVGTSVFLIGIMGTGKSTVGAALAKAMGYKHLDTDELIQGVTKKTP-AELFA 101
Query: 144 ESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARR 203
E GE+ FR ES L +++ VV+TGGG V NW + G+TV L+ + LA+R
Sbjct: 102 ELGESEFRAIESLILAEVAAYKNCVVSTGGGIVCERTNWMHLHNGVTVRLHGENELLAKR 161
Query: 204 IAAVGTDSFPLL------DYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
+ A G + PLL D ++ + + L + R Y AD TV L
Sbjct: 162 VLADGVEKRPLLASEGGESDDESEQMARVVARIEKLLEARESMYKQADLTVPL 214
>gi|158337774|ref|YP_001518950.1| shikimate kinase [Acaryochloris marina MBIC11017]
gi|158308015|gb|ABW29632.1| shikimate kinase [Acaryochloris marina MBIC11017]
Length = 182
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 87/159 (54%), Gaps = 9/159 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G L+LVGMMG GK+T G L+ L Y F D+D + +L G ++ IF ESGE +FR
Sbjct: 4 LKGVNLYLVGMMGCGKSTTGRALAKQLGYGFVDTDDLITQLTG-QAITDIFAESGEDHFR 62
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ ESK L +++ VVATGGG V+ NW F++ G+ ++L+V + L +R+ A S
Sbjct: 63 QVESKVLSEVAAHTNLVVATGGGIVLDKKNWSFLQHGLVIWLDVEAEQLWQRLQA--DQS 120
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL + L L +R Y AD + L
Sbjct: 121 RPLLQKPNPQQ------VLEELLTQRRPLYRQADVHILL 153
>gi|33860667|ref|NP_892228.1| shikimate kinase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33633609|emb|CAE18566.1| Shikimate kinase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 185
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 91/163 (55%), Gaps = 10/163 (6%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
+ G+ ++L+GMM SGK+ G +L++ L Y + D DK +E + T + ++F+E GE F
Sbjct: 12 IIQGRSIYLIGMMASGKSKTGPVLAELLRYKYIDLDKLIENIAKKT-INEMFQEDGEKAF 70
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD 210
RE E+ L++ +P +V+TGGG + +P NW +RQGI ++++ + R+ +
Sbjct: 71 RELETNCLKETIKIPSLIVSTGGGIISKPENWGVLRQGIIIWIDTKQEIALERLKK-DIE 129
Query: 211 SFPLLD-YDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
+ PLL D +D Y + F + R Y+ AD V + N
Sbjct: 130 NRPLLQGEDLSDLYNQIFQS-------RKNLYSQADLRVEVNN 165
>gi|87301781|ref|ZP_01084615.1| shikimate kinase [Synechococcus sp. WH 5701]
gi|87283349|gb|EAQ75304.1| shikimate kinase [Synechococcus sp. WH 5701]
Length = 220
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 97/183 (53%), Gaps = 8/183 (4%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L+G ++LVGMMG+GK++VG L+ AL Y F D+D +E+ G S+ ++F++ GEA FR
Sbjct: 19 LEGLNIYLVGMMGAGKSSVGRPLAQALGYRFIDADSVLEQ-HAGCSIPELFEQRGEAGFR 77
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
E ES L +++ VVATGGG V RP NW MRQG+ V+L+ + L
Sbjct: 78 ELESAVLNRIACWHSLVVATGGGVVSRPCNWGQMRQGLVVWLDA-DELLLLERLRADPGQ 136
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIA 271
PLL +AD + L L ER Y+ AD V A + VL+ P +
Sbjct: 137 RPLL--ATADPEAR----LRQLLSERRPLYSQADLRVPQDGRPATAVAEQVLESIPKVLR 190
Query: 272 MEV 274
V
Sbjct: 191 QRV 193
>gi|296115019|ref|ZP_06833662.1| 3-dehydroquinate synthase [Gluconacetobacter hansenii ATCC 23769]
gi|295978437|gb|EFG85172.1| 3-dehydroquinate synthase [Gluconacetobacter hansenii ATCC 23769]
Length = 587
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G+ + LVG+MG+GKTT+G +L+ L+ F DSD+ +E+ G S+A +F++ GEA FR
Sbjct: 47 GRSIVLVGLMGAGKTTIGRLLAARLNLEFVDSDEEIER-AAGCSIADLFQKYGEAEFRRG 105
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGIT-VFLNVPLDALARRIAAVGTDSF 212
E L++L P V+ATGGGA + P +MR+ T V+L PL L +R+
Sbjct: 106 EHMVLRRLLSGPPVVLATGGGAFMDPRTRAYMRENATSVWLRCPLPVLLQRVQ--DRTHR 163
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
PLL+ DS T LS L ++R YA AD V
Sbjct: 164 PLLNVDS------PATVLSDLMRKRHPVYAEADIIV 193
>gi|429085326|ref|ZP_19148302.1| Shikimate kinase III [Cronobacter condimenti 1330]
gi|426545447|emb|CCJ74343.1| Shikimate kinase III [Cronobacter condimenti 1330]
Length = 174
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 80/120 (66%), Gaps = 8/120 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q ++LVG G GKTT GE L+ AL Y FAD+D+++ + T VAQ+ ++ G A FR E
Sbjct: 3 QPIYLVGARGCGKTTTGEALARALAYGFADTDRWLLEQTQMT-VAQVVEQEGWAGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+AL +S P VVATGGG V+R N FMRQ G+ ++LNVP+D LA+R+ ++FP
Sbjct: 62 SQALHAVS-APATVVATGGGMVLREENREFMRQHGVVIYLNVPVDVLAQRL-----EAFP 115
>gi|444921588|ref|ZP_21241423.1| Shikimate kinase [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507315|gb|ELV07492.1| Shikimate kinase [Wohlfahrtiimonas chitiniclastica SH04]
Length = 188
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 10/151 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
FLVG MG GKTTVG+ L++ L ++F DSD Y+E G S+A +F GE FR+ E
Sbjct: 5 NSFFLVGPMGVGKTTVGQALAEQLGFSFIDSDAYIEN-QAGQSIADLFATQGEVAFRDLE 63
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
+KA+ LSL+P V++TGGGA++R +N +++ +G +FL++ A+ RI G + P
Sbjct: 64 TKAIDALSLLPNIVLSTGGGAILRDVNRDYLKSRGTVIFLDLAPSAIFERIK--GDQTRP 121
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANA 244
LL T L + ER Y +A
Sbjct: 122 LL------KTTSPLGTLQNIYDERHPIYLDA 146
>gi|284929680|ref|YP_003422202.1| shikimate kinase [cyanobacterium UCYN-A]
gi|284810124|gb|ADB95821.1| shikimate kinase [cyanobacterium UCYN-A]
Length = 183
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G +FL+GMMGSGKTT G+ L++ L+Y F D+D ++++ T ++ IF E GE
Sbjct: 4 NLLQGINIFLIGMMGSGKTTTGKRLAEHLNYRFFDTDTLIKQVKQKT-ISDIFVEEGEES 62
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FR ES L +L+ + V+ATGGG V++ NW ++ G+ ++L+ + L +R+
Sbjct: 63 FRILESNVLSELASCTRSVIATGGGIVLKQENWSYLHHGLIIWLDTSIPILKKRLNH-DL 121
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
S PL+ + D L L K+R Y D +
Sbjct: 122 SSRPLIQKEKLD------IELELLLKQRHALYKQGDLKI 154
>gi|157412463|ref|YP_001483329.1| shikimate kinase [Prochlorococcus marinus str. MIT 9215]
gi|157387038|gb|ABV49743.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9215]
Length = 185
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 89 ASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEA 148
+ G+ +FL+GMMGSGK+ G L++ L Y + D D +EKL S+ QIFK+ GE
Sbjct: 10 VKIIKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLIEKL-AKKSINQIFKDEGED 68
Query: 149 YFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVG 208
FRE E+ L++ +P V++TGGG V + NW +RQGI ++++ D R+
Sbjct: 69 NFRELEANCLKETIKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLEKDIAIERLKN-E 127
Query: 209 TDSFPLLD-YDSADSYTKAFTALSALSKERSEAYANADATVSL 250
++ PLL + D Y F + R Y+ AD + +
Sbjct: 128 IENRPLLQGKNLNDLYMSIFQS-------RENLYSQADLRIQV 163
>gi|93006992|ref|YP_581429.1| shikimate kinase [Psychrobacter cryohalolentis K5]
gi|122414838|sp|Q1Q8Q8.1|AROK_PSYCK RecName: Full=Shikimate kinase; Short=SK
gi|92394670|gb|ABE75945.1| shikimate kinase [Psychrobacter cryohalolentis K5]
Length = 186
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 78/121 (64%), Gaps = 4/121 (3%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+FLVG MG+GKTT+G +L+ L +F DSD Y+E G +A IF + GEA FRE E+
Sbjct: 7 SVFLVGPMGAGKTTIGRLLAKQLGRSFVDSDWYIES-QTGADIAWIFAKEGEAGFRERET 65
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPL 214
+A+ +L+ PQ V+ATGGGAV+ N +++Q GI ++LN P+D R A S PL
Sbjct: 66 RAIDELTQQPQIVLATGGGAVMAAENREYLKQRGIVIYLNAPVDVQMARTAK--DKSRPL 123
Query: 215 L 215
L
Sbjct: 124 L 124
>gi|420157803|ref|ZP_14664631.1| shikimate kinase [Clostridium sp. MSTE9]
gi|394755631|gb|EJF38830.1| shikimate kinase [Clostridium sp. MSTE9]
Length = 174
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 79/134 (58%), Gaps = 4/134 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L G MGSGKTTVG++L+ F D D+Y+E+ G T ++QIF + GE FR E++
Sbjct: 5 IVLCGFMGSGKTTVGQVLAQKSGRRFFDLDQYIEQRQGKT-ISQIFADEGEQTFRRLETE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A +KLS V+ATGGGAV+R N +RQ G+ V L+ LD L RR+ G PLL
Sbjct: 64 AARKLSSQKDLVIATGGGAVLREENVDILRQNGVIVLLDASLDTLERRLD--GVSDRPLL 121
Query: 216 DYDSADSYTKAFTA 229
D + +A A
Sbjct: 122 QRDDRQEFLRALYA 135
>gi|374340460|ref|YP_005097196.1| 3-dehydroquinate synthase [Marinitoga piezophila KA3]
gi|372101994|gb|AEX85898.1| 3-dehydroquinate synthetase [Marinitoga piezophila KA3]
Length = 487
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++L+GMMGSGKTT+G LS L+ +F D DK +EK+ T++ +F + GE YFR ESK
Sbjct: 3 IYLIGMMGSGKTTLGNKLSKILNMSFIDLDKEIEKI-ENTTINNLFSKKGEEYFRNLESK 61
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
L+ +VATGGG ++R N F++ T+FL VP++ L +RI D+ PLL
Sbjct: 62 VLKNTE-AKNAIVATGGGIILRKENRLFLKNHKTIFLYVPVEDLIKRINP---DNRPLLK 117
Query: 217 YDSADSYTKAFTALSALSKE 236
D D K + AL E
Sbjct: 118 -DGKDRLYKIWDMRKALYNE 136
>gi|123967661|ref|YP_001008519.1| shikimate kinase [Prochlorococcus marinus str. AS9601]
gi|123197771|gb|ABM69412.1| Shikimate kinase [Prochlorococcus marinus str. AS9601]
Length = 185
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 10/161 (6%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L G+ +FL+GMMGSGK+ G L++ L Y + D D +EKL S+ QIF + GE F
Sbjct: 12 TLKGRSIFLIGMMGSGKSKTGLKLAELLKYKYIDLDSLIEKL-AKKSINQIFNDEGEEKF 70
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD 210
RE E+ L++ +P V++TGGG V + NW +RQGI ++++ D R+ +
Sbjct: 71 RELEANCLKETIKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLDKDIAIERLKN-EIE 129
Query: 211 SFPLLD-YDSADSYTKAFTALSALSKERSEAYANADATVSL 250
+ PLL + D Y F + R Y+ AD + +
Sbjct: 130 NRPLLQGKNLNDLYMSIFQS-------RENLYSQADLRIQV 163
>gi|116071455|ref|ZP_01468723.1| shikimate kinase [Synechococcus sp. BL107]
gi|116065078|gb|EAU70836.1| shikimate kinase [Synechococcus sp. BL107]
Length = 191
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ ++L+GMMGSGKT+ G L+ L Y F D+D +E++ T + +IF+ GE FR
Sbjct: 12 LGGRSIYLIGMMGSGKTSTGRPLAKRLGYGFVDADAVIEQVANCT-IPEIFERDGEEGFR 70
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
ES+ L +S VVATGGG V +P NW + GI V+L+V L R+ T
Sbjct: 71 LIESQVLNAISQRHSLVVATGGGVVTKPENWGQLHSGIVVWLDVDRLQLIERLRGDATQR 130
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTI 270
PLL ++ AL AL +R Y AD TV + + +L + PT I
Sbjct: 131 -PLLQQPDPEA------ALDALLLQRRPLYDEADLTVVIQDETPDDVADGILQLLPTLI 182
>gi|312115311|ref|YP_004012907.1| shikimate kinase [Rhodomicrobium vannielii ATCC 17100]
gi|311220440|gb|ADP71808.1| Shikimate kinase [Rhodomicrobium vannielii ATCC 17100]
Length = 212
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
Query: 81 LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQ 140
LK + V L Q + LVGMMGSGK+++G L+ ALD F D+D +E G ++ +
Sbjct: 10 LKPMAKAVRHALGRQSVILVGMMGSGKSSIGRRLATALDLPFHDADAEIET-AAGMTIEE 68
Query: 141 IFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRP-LNWRFMRQGITVFLNVPLDA 199
+F+ GE YFR+ E + +++L QV++TGGG+V+ P R G++++L+ PLD
Sbjct: 69 MFRTHGEGYFRDGEERVIRRLLQSGSQVLSTGGGSVISPATRAEIARGGVSIWLHAPLDL 128
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL 259
L +R++ D+ PLL D L L +R YA + + + +
Sbjct: 129 LLQRVSR--RDNRPLLKNDD------PMAVLQRLLAQREPFYAESSLKFESRDAPHEVIV 180
Query: 260 KDVLDI 265
++LD+
Sbjct: 181 DEILDL 186
>gi|81702041|sp|Q74BL5.1|AROK_GEOSL RecName: Full=Shikimate kinase; Short=SK
Length = 175
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 90/154 (58%), Gaps = 10/154 (6%)
Query: 93 DGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFRE 152
DG+ + L G MG+GK+TVG++L+ L Y F+D D + + G S+ +IF+ GE FRE
Sbjct: 6 DGRNVVLTGFMGTGKSTVGKLLARRLGYRFSDLDALIVE-RAGISINEIFERYGEQRFRE 64
Query: 153 YESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS 211
E++A++ L V +VVATGGGAV+ P N +R+ G+ V L L+ + R+ G
Sbjct: 65 LETEAIRSLGGVSGRVVATGGGAVIAPRNRVLLREAGLVVNLTASLEVILSRLK--GDRE 122
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANAD 245
PLL ++ AL+AL R AYA+AD
Sbjct: 123 RPLLKSNNTPE------ALAALMTARENAYADAD 150
>gi|443316765|ref|ZP_21046197.1| shikimate kinase [Leptolyngbya sp. PCC 6406]
gi|442783620|gb|ELR93528.1| shikimate kinase [Leptolyngbya sp. PCC 6406]
Length = 221
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 87/149 (58%), Gaps = 9/149 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L+LVGMMG+GK+T+G+ L+ L Y F D+D +E+ S+ IF E+GE+ FR+ E+
Sbjct: 40 LYLVGMMGAGKSTLGKRLAAVLKYRFFDTDTLIEQ-TAQRSIGDIFAEAGESTFRDLETA 98
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
+++L+ + VV+TGGG V+R NW +RQG+ V+++VPL L R+A PLL
Sbjct: 99 VIRELAPYTRIVVSTGGGMVLRRENWGHLRQGVVVWVDVPLRELENRLAL--DRGRPLLQ 156
Query: 217 YDSADSYTKAFTALSALSKERSEAYANAD 245
+ L+ L +R Y AD
Sbjct: 157 RPDWRDH------LATLLSQRQALYREAD 179
>gi|400756587|ref|NP_953075.2| shikimate kinase [Geobacter sulfurreducens PCA]
gi|409912549|ref|YP_006891014.1| shikimate kinase [Geobacter sulfurreducens KN400]
gi|307634966|gb|ADI84860.2| shikimate kinase [Geobacter sulfurreducens KN400]
gi|399107898|gb|AAR35402.2| shikimate kinase [Geobacter sulfurreducens PCA]
Length = 181
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 90/154 (58%), Gaps = 10/154 (6%)
Query: 93 DGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFRE 152
DG+ + L G MG+GK+TVG++L+ L Y F+D D + + G S+ +IF+ GE FRE
Sbjct: 12 DGRNVVLTGFMGTGKSTVGKLLARRLGYRFSDLDALIVE-RAGISINEIFERYGEQRFRE 70
Query: 153 YESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS 211
E++A++ L V +VVATGGGAV+ P N +R+ G+ V L L+ + R+ G
Sbjct: 71 LETEAIRSLGGVSGRVVATGGGAVIAPRNRVLLREAGLVVNLTASLEVILSRLK--GDRE 128
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANAD 245
PLL ++ AL+AL R AYA+AD
Sbjct: 129 RPLLKSNNTPE------ALAALMTARENAYADAD 156
>gi|20807724|ref|NP_622895.1| shikimate kinase [Thermoanaerobacter tengcongensis MB4]
gi|81481662|sp|Q8RAE8.1|AROK_THETN RecName: Full=Shikimate kinase; Short=SK
gi|20516276|gb|AAM24499.1| Shikimate kinase [Thermoanaerobacter tengcongensis MB4]
Length = 171
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 96/182 (52%), Gaps = 22/182 (12%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L G MG+GKTTVG+ ++ L + F D+DK VEK M G SVA+IF++ GE YFR+ E
Sbjct: 2 KNIVLTGFMGTGKTTVGKKVATTLHFNFIDTDKLVEK-MAGMSVAEIFEKHGEEYFRKLE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
A+ K S + V+ATGGG V+ P N +R+ G+ + L + + R I+ T P
Sbjct: 61 KAAVIKASRLKNHVIATGGGVVLNPSNIVQLRKNGVIILLKARPEVILRNISK--TKDRP 118
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAME 273
LL + + + L +ER Y AD T+ DV D T +A E
Sbjct: 119 LLAVEDPEK------RIRELLEEREPFYRFADYTI------------DVSDKTIEEVAEE 160
Query: 274 VL 275
V+
Sbjct: 161 VI 162
>gi|72383312|ref|YP_292667.1| shikimate kinase [Prochlorococcus marinus str. NATL2A]
gi|115312159|sp|Q46HR4.1|AROK_PROMT RecName: Full=Shikimate kinase; Short=SK
gi|72003162|gb|AAZ58964.1| shikimate kinase [Prochlorococcus marinus str. NATL2A]
Length = 198
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ +FL+GMMGSGK+ G +L+ ++Y F D+D +EK S++ IF++ GE FR
Sbjct: 14 LGGRNIFLIGMMGSGKSQTGPVLAKMINYAFVDTDDVIEK-ASKQSISSIFEKDGEKVFR 72
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ E K L+++S V+ATGGG V P NW + QGI ++L++ L +R+ +
Sbjct: 73 DVEKKVLKEISQHHSLVIATGGGLVTLPENWGILHQGIVIWLDLDLRRSIKRLESDHKRR 132
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
LL + A+++++ + + R Y +D + +
Sbjct: 133 PLLLGDNLAENFSQIYES-------RKPIYLESDLRIEV 164
>gi|427734518|ref|YP_007054062.1| shikimate kinase [Rivularia sp. PCC 7116]
gi|427369559|gb|AFY53515.1| shikimate kinase [Rivularia sp. PCC 7116]
Length = 181
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 95/188 (50%), Gaps = 20/188 (10%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G L+L+GMMG+GKTTVG +L+ L+Y F D+D+ + S+ QIF GEA
Sbjct: 3 NLLQGINLYLIGMMGAGKTTVGRLLASELEYGFVDTDEVITA-SAKKSINQIFAAEGEAE 61
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FR+ ES L ++S + VATGGG V++ NW ++ G+ V+L+ + L R+ T
Sbjct: 62 FRKLESDVLSQVSAYTRLTVATGGGIVLKRQNWSYLHHGLIVWLDATAELLYDRLKEDTT 121
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTT 269
PLL + L L +ER YA AD +++ TP
Sbjct: 122 R--PLL------KESNPLLKLRNLLEERESLYALADLRITIKE-----------GETPEE 162
Query: 270 IAMEVLVQ 277
IA VL Q
Sbjct: 163 IAKRVLTQ 170
>gi|255034035|ref|YP_003084656.1| shikimate kinase [Dyadobacter fermentans DSM 18053]
gi|254946791|gb|ACT91491.1| Shikimate kinase [Dyadobacter fermentans DSM 18053]
Length = 167
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 86/153 (56%), Gaps = 7/153 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVGMM SGKTT+G+ L+ AL+Y F D DK +EK G ++ IF + GEAYFRE ES+
Sbjct: 4 IILVGMMSSGKTTLGKKLARALNYQFVDLDKLIEKDQ-GMEISSIFAQRGEAYFREVESR 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
L++ + V+A+GGG N ++ GI++FL+VP LARRI G D P+L
Sbjct: 63 ILKETASQKGIVLASGGGTPCFFDNMEVIKAMGISIFLDVPAGDLARRIENHGKDDRPIL 122
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
T L A +R Y AD T+
Sbjct: 123 -----SGTTSLVDTLQARITDRLPYYTQADFTL 150
>gi|124024892|ref|YP_001014008.1| shikimate kinase [Prochlorococcus marinus str. NATL1A]
gi|123959960|gb|ABM74743.1| Shikimate kinase [Prochlorococcus marinus str. NATL1A]
Length = 198
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ +FL+GMMGSGK+ G +L+ ++Y F D+D +EK S++ IF++ GE FR
Sbjct: 14 LGGRNIFLIGMMGSGKSQTGPVLAKMINYAFVDTDDVIEK-ASKQSISSIFEKDGEKVFR 72
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ E K L+++S V+ATGGG V P NW + QGI ++L++ L +R+ +
Sbjct: 73 DVEKKVLKEISQHHSLVIATGGGLVTLPENWGILHQGIVIWLDLDLRRSIKRLESDQKRR 132
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
LL + A+++++ + + R Y +D + +
Sbjct: 133 PLLLGDNLAENFSQIYES-------RKPIYLESDLRIEV 164
>gi|429107611|ref|ZP_19169480.1| Shikimate kinase III [Cronobacter malonaticus 681]
gi|426294334|emb|CCJ95593.1| Shikimate kinase III [Cronobacter malonaticus 681]
Length = 174
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 78/120 (65%), Gaps = 8/120 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q ++LVG G GKTT GE L+ AL Y FAD+D+++ + T VA++ + G FR E
Sbjct: 3 QPIYLVGARGCGKTTTGEALARALAYGFADTDRWLLEQTQMT-VAEVVEREGWPGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
SKALQ ++ P VVATGGG V+R N FMR G+ ++LNVP+D LA+R+ ++FP
Sbjct: 62 SKALQAVT-APATVVATGGGMVLRDENREFMRAHGVVIYLNVPVDVLAQRL-----EAFP 115
>gi|54288385|gb|AAV31673.1| predicted shikimate kinase [uncultured alpha proteobacterium
EBAC2C11]
Length = 198
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 87/154 (56%), Gaps = 10/154 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L LVG+MGSGK+ VG + L F DSD+ + G S+ +IF+ +GEA FRE E +
Sbjct: 30 LALVGLMGSGKSAVGRQTAKKLGLDFTDSDQKIIN-NAGISITEIFELAGEAKFREMEFQ 88
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWR-FMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
AL+KL+L Q++ATGGGA P + + + V+L P + L RI GT S PLL
Sbjct: 89 ALKKLALSKPQIIATGGGAFCFPQTAHLLLTKTLVVWLKAPPETLLARIG--GTKSRPLL 146
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVS 249
+ D+ L+ LSKER++ Y A ++
Sbjct: 147 NNDN------PLATLTKLSKERAKHYQKAQIEIN 174
>gi|126695461|ref|YP_001090347.1| shikimate kinase [Prochlorococcus marinus str. MIT 9301]
gi|126542504|gb|ABO16746.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9301]
Length = 185
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 10/161 (6%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
+ G+ +FL+GMMGSGK+ G L++ L Y + D D +EKL S+ QIF + GE F
Sbjct: 12 TIKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLIEKL-AKKSINQIFNDEGEDNF 70
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD 210
RE E+ L++ +P V++TGGG V + NW +RQGI ++++ D R+
Sbjct: 71 RELEANCLKETIKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLDKDIAIERLKN-EIK 129
Query: 211 SFPLLD-YDSADSYTKAFTALSALSKERSEAYANADATVSL 250
+ PLL + D Y F + R Y+ AD + +
Sbjct: 130 NRPLLQGKNLNDLYMSIFQS-------RENLYSQADLRIQV 163
>gi|78778496|ref|YP_396608.1| shikimate kinase [Prochlorococcus marinus str. MIT 9312]
gi|78711995|gb|ABB49172.1| shikimate kinase [Prochlorococcus marinus str. MIT 9312]
Length = 185
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 10/165 (6%)
Query: 89 ASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEA 148
+ G+ +FL+GMMG GK+ G L++ L Y + D D +EKL S+ QIF + GE
Sbjct: 10 VKVIKGRSIFLIGMMGCGKSQTGLKLAELLKYKYIDLDSLIEKL-AKKSINQIFNDEGED 68
Query: 149 YFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVG 208
FRE E+ L++ +P V++TGGG V + NW +RQGI ++++ D R+
Sbjct: 69 NFRELETSCLKETIKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLDKDIAIERLKN-E 127
Query: 209 TDSFPLLD-YDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
++ PLL + D Y ++ K R Y+ AD + + N
Sbjct: 128 IENRPLLQGKNLNDLYM-------SILKSRENLYSQADLRIQVKN 165
>gi|429092509|ref|ZP_19155137.1| Shikimate kinase III [Cronobacter dublinensis 1210]
gi|426742708|emb|CCJ81250.1| Shikimate kinase III [Cronobacter dublinensis 1210]
Length = 174
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 81/120 (67%), Gaps = 8/120 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q ++L+G G GKTT GE L+ AL Y FAD+D+++ + T VA++ ++ G FR+ E
Sbjct: 3 QPIYLIGARGCGKTTTGEALARALGYGFADTDRWLFEQTQMT-VAEVVEKEGWPGFRDRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ALQ ++L P VVATGGG V+R N FMRQ G+ ++LNVP+ LA+R+ ++FP
Sbjct: 62 SEALQAVTL-PATVVATGGGMVLRDGNREFMRQHGVVIYLNVPVAVLAQRL-----EAFP 115
>gi|87125217|ref|ZP_01081063.1| Shikimate kinase [Synechococcus sp. RS9917]
gi|86166986|gb|EAQ68247.1| Shikimate kinase [Synechococcus sp. RS9917]
Length = 201
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 102/193 (52%), Gaps = 20/193 (10%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ L+LVGMMGSGK++ G L+ +LDY F D+D +E+ + G S+ +F+E GE FR
Sbjct: 16 LGGRNLYLVGMMGSGKSSSGRPLAASLDYGFVDADAVIEQ-VAGRSIPHLFEEEGEEGFR 74
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ ES+ LQ + VVATGGG V RP NW + QG+ V+L+ D L +R+
Sbjct: 75 DLESQVLQAIGQRHSLVVATGGGIVTRPENWGVLHQGLVVWLDPDRDQLLQRLRR-DPGE 133
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIA 271
PLL SAD T LSA R YA AD ++ IG D TP +A
Sbjct: 134 RPLL--RSADPAATLDTLLSA----RRPLYAEADVQLT-------IG-----DDTPEEVA 175
Query: 272 MEVLVQAQKYLNS 284
VL LN
Sbjct: 176 QRVLDAIPAVLNP 188
>gi|429088785|ref|ZP_19151517.1| Shikimate kinase III [Cronobacter universalis NCTC 9529]
gi|426508588|emb|CCK16629.1| Shikimate kinase III [Cronobacter universalis NCTC 9529]
Length = 174
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 79/120 (65%), Gaps = 8/120 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q ++LVG G GKTT GE L+ AL Y FAD+D+++ + T VA++ ++ G FR E
Sbjct: 3 QPIYLVGARGCGKTTTGEALARALAYGFADTDRWLLEQTRMT-VAEVVEKEGWPGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
S+ALQ ++ P VVATGGG V+R N FMR G+ ++LNVP+D LA+R+ ++FP
Sbjct: 62 SEALQAVT-APATVVATGGGMVLRDENREFMRAHGVVIYLNVPVDVLAQRL-----EAFP 115
>gi|387219603|gb|AFJ69510.1| shikimate kinase, partial [Nannochloropsis gaditana CCMP526]
Length = 450
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 95/165 (57%), Gaps = 7/165 (4%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
E+ + G ++LVGM GSGKTT+G +L++ L Y + D D+++E+ +G + ++F+E G
Sbjct: 210 EIKMRIQGVNVYLVGMPGSGKTTLGRMLAEGLQYRWMDLDQFIEQKLG-KAATKVFEEDG 268
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAA 206
E +R+ E+ + L Q VV+TGGG + R N F+ G+ V+L++P + + R+ +
Sbjct: 269 EEVWRKQETLGMGALQTYVQTVVSTGGGIMQRKENLPFLHSGLIVWLDLPPEGIVARMQS 328
Query: 207 VG-TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
G + PLL + + A+ +L +ER YA AD V L
Sbjct: 329 SGEIEKRPLL-----KAASDPVQAVRSLYEERKGNYALADVRVVL 368
>gi|168184585|ref|ZP_02619249.1| shikimate kinase [Clostridium botulinum Bf]
gi|237795314|ref|YP_002862866.1| shikimate kinase [Clostridium botulinum Ba4 str. 657]
gi|259585300|sp|C3KXE0.1|AROK_CLOB6 RecName: Full=Shikimate kinase; Short=SK
gi|182672398|gb|EDT84359.1| shikimate kinase [Clostridium botulinum Bf]
gi|229260499|gb|ACQ51532.1| shikimate kinase [Clostridium botulinum Ba4 str. 657]
Length = 170
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM SGK+T+G +S L Y D+D +EK M G S+ +IFK GE YFRE E
Sbjct: 2 ENIVLIGMPLSGKSTLGREISKILKYDLIDTDTLIEK-MEGKSIKEIFKIYGEDYFREKE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
+ + KL +V++TGGG + N + + G TV+L VPL+ L +R+ G D+ P
Sbjct: 61 LEIINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKGEDTRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + L + K R E Y A +
Sbjct: 121 LLKNNDTK-------FLEEMYKNRIEIYEKAHTII 148
>gi|260596758|ref|YP_003209329.1| Shikimate kinase 2 [Cronobacter turicensis z3032]
gi|260215935|emb|CBA28532.1| Shikimate kinase 2 [Cronobacter turicensis z3032]
Length = 174
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 80/120 (66%), Gaps = 8/120 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q ++LVG G GKTT GE L+ AL Y FAD+D+++ + T VA++ ++ G FR+ E
Sbjct: 3 QPIYLVGARGCGKTTTGEALARALAYGFADTDRWLLEQTQMT-VAEVVEKEGWPGFRDRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
S+ALQ ++ P VVATGGG V+R N FMR GI ++LNVP++ LA+R+ ++FP
Sbjct: 62 SEALQAVT-APATVVATGGGMVLRDENREFMRAHGIVIYLNVPVEVLAQRL-----EAFP 115
>gi|422295213|gb|EKU22512.1| shikimate kinase, partial [Nannochloropsis gaditana CCMP526]
Length = 446
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 95/165 (57%), Gaps = 7/165 (4%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
E+ + G ++LVGM GSGKTT+G +L++ L Y + D D+++E+ +G + ++F+E G
Sbjct: 206 EIKMRIQGVNVYLVGMPGSGKTTLGRMLAEGLQYRWMDLDQFIEQKLG-KAATKVFEEDG 264
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAA 206
E +R+ E+ + L Q VV+TGGG + R N F+ G+ V+L++P + + R+ +
Sbjct: 265 EEVWRKQETLGMGALQTYVQTVVSTGGGIMQRKENLPFLHSGLIVWLDLPPEGIVARMQS 324
Query: 207 VG-TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
G + PLL + + A+ +L +ER YA AD V L
Sbjct: 325 SGEIEKRPLL-----KAASDPVQAVRSLYEERKGNYALADVRVVL 364
>gi|78189187|ref|YP_379525.1| shikimate kinase [Chlorobium chlorochromatii CaD3]
gi|115312143|sp|Q3AR93.1|AROK_CHLCH RecName: Full=Shikimate kinase; Short=SK
gi|78171386|gb|ABB28482.1| shikimate kinase [Chlorobium chlorochromatii CaD3]
Length = 190
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 90/155 (58%), Gaps = 6/155 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G GSGK+T+G +L+++L Y F D D +E+ G S+ QIF E+GEA FR++E +
Sbjct: 8 IFLTGFSGSGKSTIGPLLANSLGYEFVDLDALIERECG-KSINQIFAEAGEAAFRQHEEQ 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+ L + + VV+ GGG + +P + +RQ G V+L P+ LARR++ TD PLL
Sbjct: 67 TLETLLMRRKTVVSLGGGVLEQPRAFELVRQAGTVVYLKSPVKTLARRLSN-KTDR-PLL 124
Query: 216 DYDSAD--SYTKAFTALSALSKERSEAYANADATV 248
+ + S + ++ L R Y AD TV
Sbjct: 125 KGEQGEKLSQEEIEQKIAELLARREPRYECADITV 159
>gi|284037203|ref|YP_003387133.1| shikimate kinase [Spirosoma linguale DSM 74]
gi|283816496|gb|ADB38334.1| Shikimate kinase [Spirosoma linguale DSM 74]
Length = 168
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 88/154 (57%), Gaps = 6/154 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+GM SGK+T+G+ ++D L Y F D+DK + + G T +A+IF ESGEAYFRE E +
Sbjct: 4 IFLIGMPSSGKSTLGKRVADTLHYRFIDTDKLISREEGRT-IAEIFAESGEAYFREAERR 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
L+ + VV+TGGG N ++ G++VFL+VP++ L +RI A + PL
Sbjct: 63 VLRTIRPGGNMVVSTGGGMPCFHDNMAYINATGVSVFLDVPVNVLVQRITAHAQEDRPL- 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVS 249
++AD L A + R Y A +S
Sbjct: 122 -NNAADPELAEI--LKARHESRLPIYTQAHIIIS 152
>gi|417791078|ref|ZP_12438571.1| hypothetical protein CSE899_10677 [Cronobacter sakazakii E899]
gi|449309285|ref|YP_007441641.1| shikimate kinase II [Cronobacter sakazakii SP291]
gi|333954821|gb|EGL72630.1| hypothetical protein CSE899_10677 [Cronobacter sakazakii E899]
gi|449099318|gb|AGE87352.1| shikimate kinase II [Cronobacter sakazakii SP291]
Length = 174
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 79/120 (65%), Gaps = 8/120 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q ++L+G G GKTT GE L+ AL Y FAD+D+++ + T VA++ ++ G FR E
Sbjct: 3 QPIYLIGARGCGKTTTGEALARALAYGFADTDRWLREHTQMT-VAEVVEKEGWPGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
S+ALQ ++ P VVATGGG V+R N FMR G+ ++LNVP++ LA+R+ ++FP
Sbjct: 62 SEALQAVT-APATVVATGGGMVLRDENREFMRAHGVVIYLNVPVEVLAQRL-----EAFP 115
>gi|219127919|ref|XP_002184173.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404404|gb|EEC44351.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 277
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 94/167 (56%), Gaps = 11/167 (6%)
Query: 85 GREVASCLDGQCLFLVGMMGSGKTTVGEILSDAL-DYTFADSDKYVEKLMGGTSVAQIFK 143
GR + L+G ++ VG+MGSGK+ VG+IL+ + Y F D+D+ +E+ G T + +IFK
Sbjct: 77 GRLLGPRLNGSNVYFVGIMGSGKSAVGDILARRMGTYNFLDTDEIIERATGMT-IPEIFK 135
Query: 144 ESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARR 203
GE FR E++ L + + +++TGGG V++ NW ++ G+ V+L+ + + RR
Sbjct: 136 AEGEEGFRTVEAQVLDSVHPYVRCIISTGGGIVIKLENWSKLQTGLVVWLDCEPEVIMRR 195
Query: 204 IAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
I GTD PLL D+ L L ER + Y+ AD + +
Sbjct: 196 IE--GTDR-PLLQTDN------PLQKLKDLLAEREDKYSQADIRIKV 233
>gi|345857868|ref|ZP_08810286.1| shikimate kinase family protein [Desulfosporosinus sp. OT]
gi|344328955|gb|EGW40315.1| shikimate kinase family protein [Desulfosporosinus sp. OT]
Length = 177
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 85/153 (55%), Gaps = 12/153 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GK+TVG+ L+ +L + F D+D + ++ SV +IF+ GE FR E
Sbjct: 4 IVLIGFMGTGKSTVGKRLAQSLAWDFVDTDCEIGEVTN-LSVTEIFRRHGETRFRSEERI 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+ +LS Q V+ATGGG V+ PLNW + Q GI + L+ L+A+ RI TD PLL
Sbjct: 63 VVARLSQQEQIVIATGGGTVLNPLNWEALAQNGIVIALHASLEAIISRIGH-KTDR-PLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
A+ L ER E YA AD TV
Sbjct: 121 KGSKE--------AIEKLWSERQECYAQADFTV 145
>gi|156935063|ref|YP_001438979.1| hypothetical protein ESA_02914 [Cronobacter sakazakii ATCC BAA-894]
gi|389841995|ref|YP_006344079.1| shikimate kinase II [Cronobacter sakazakii ES15]
gi|429122539|ref|ZP_19183116.1| Shikimate kinase III [Cronobacter sakazakii 680]
gi|166988289|sp|A7MLV5.1|AROL_ENTS8 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|156533317|gb|ABU78143.1| hypothetical protein ESA_02914 [Cronobacter sakazakii ATCC BAA-894]
gi|387852471|gb|AFK00569.1| putative shikimate kinase II [Cronobacter sakazakii ES15]
gi|426323007|emb|CCK13853.1| Shikimate kinase III [Cronobacter sakazakii 680]
Length = 174
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 79/120 (65%), Gaps = 8/120 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q ++L+G G GKTT GE L+ AL Y FAD+D+++ + T VA++ ++ G FR E
Sbjct: 3 QPIYLIGARGCGKTTTGEALARALAYGFADTDRWLREHTQMT-VAEVVEKEGWPGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
S+ALQ ++ P VVATGGG V+R N FMR G+ ++LNVP++ LA+R+ ++FP
Sbjct: 62 SEALQAVT-APATVVATGGGMVLRDENREFMRAHGVVIYLNVPVEVLAQRL-----EAFP 115
>gi|238022252|ref|ZP_04602678.1| hypothetical protein GCWU000324_02159 [Kingella oralis ATCC 51147]
gi|237866866|gb|EEP67908.1| hypothetical protein GCWU000324_02159 [Kingella oralis ATCC 51147]
Length = 178
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 88/143 (61%), Gaps = 7/143 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
LFLVG+MG+GKTT G+ L+ L+ TF DSD+ + + G + IF+ GEA FR ES
Sbjct: 8 LFLVGLMGAGKTTQGKRLAQHLNRTFFDSDQVICERTG-VDIPTIFEMEGEAGFRNRESN 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTD-SFPL 214
+ +LSL+P V+ATGGGAV+R N ++RQ G+ V+L+V + L R VG D + PL
Sbjct: 67 IINELSLLPNIVLATGGGAVLREQNRDYLRQRGLVVYLHVQPETLFER---VGKDRNRPL 123
Query: 215 LDY-DSADSYTKAFTALSALSKE 236
L D+ + + A A+ +E
Sbjct: 124 LQVQDALAKFRDLYRARDAIYRE 146
>gi|299473618|emb|CBN78012.1| Shikimate Kinase [Ectocarpus siliculosus]
Length = 224
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 93/174 (53%), Gaps = 10/174 (5%)
Query: 80 LLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALD-YTFADSDKYVEKLMGGTSV 138
+L+ + E+ S L G +F VGMMG+GK+TV L+D + Y F D+D +E+L+G SV
Sbjct: 15 VLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLG-ASV 73
Query: 139 AQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLD 198
++F + GE FR ES+ L ++ + VATGGG V NW M+ G+ V+L++
Sbjct: 74 GEVFAKDGEEGFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPK 133
Query: 199 ALARRIAAVGTD--SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
+ R++ + PLL D L L ++R YA AD TV L
Sbjct: 134 DIFERLSKDPEEVAKRPLLAGDDPQG------KLEELLEKRKPQYAQADVTVQL 181
>gi|397609609|gb|EJK60447.1| hypothetical protein THAOC_19201 [Thalassiosira oceanica]
Length = 282
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 76 DGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALD-YTFADSDKYVEKLMG 134
D + LL R ++ L G L+L+GMMGSGK+ VG+ L+ + Y F D+D +E+ +G
Sbjct: 73 DEEGLLVDPARLLSPRLRGCNLYLIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAVG 132
Query: 135 GTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLN 194
S+ +IF++ GE FR+ E++ L + + V+ TGGG V R NW ++ G+ ++L
Sbjct: 133 -MSIPEIFEKEGEDAFRDAEAQVLDSVHAHVRCVIGTGGGLVTRNQNWAKLQTGLVLYLK 191
Query: 195 VPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL---L 251
+ + +RI GTD PLL D L L++ER Y AD T+ + +
Sbjct: 192 TDPETIYKRIE--GTDR-PLLQTDD------PLATLKDLTEERRGKYEQADVTIEVEDGM 242
Query: 252 NLAA----CIG-LKDVLDITP 267
++ A CI L D +D P
Sbjct: 243 DVEAVTDMCIRMLHDFIDDNP 263
>gi|397566788|gb|EJK45217.1| hypothetical protein THAOC_36180 [Thalassiosira oceanica]
Length = 278
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 76 DGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALD-YTFADSDKYVEKLMG 134
D + LL R ++ L G L+L+GMMGSGK+ VG+ L+ + Y F D+D +E+ +G
Sbjct: 69 DEEGLLVDPARLLSPRLRGCNLYLIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAVG 128
Query: 135 GTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLN 194
S+ +IF++ GE FR+ E++ L + + V+ TGGG V R NW ++ G+ ++L
Sbjct: 129 -MSIPEIFEKEGEDAFRDAEAQVLDSVHAHVRCVIGTGGGLVTRNQNWAKLQTGLVLYLK 187
Query: 195 VPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL---L 251
+ + +RI GTD PLL D L L++ER Y AD T+ + +
Sbjct: 188 TDPETIYKRIE--GTDR-PLLQTDD------PLATLKDLTEERRGKYEQADVTIEVEDGM 238
Query: 252 NLAA----CIG-LKDVLDITP 267
++ A CI L D +D P
Sbjct: 239 DVEAVTDMCIRMLHDFIDDNP 259
>gi|225850938|ref|YP_002731172.1| shikimate kinase [Persephonella marina EX-H1]
gi|254806779|sp|C0QR76.1|AROK_PERMH RecName: Full=Shikimate kinase; Short=SK
gi|225646155|gb|ACO04341.1| shikimate kinase [Persephonella marina EX-H1]
Length = 164
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 87/154 (56%), Gaps = 12/154 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MGSGK+TVG++L++ L + F D D+ +EK G + IF+E GE+YFR+ E +
Sbjct: 4 IYLVGFMGSGKSTVGKLLAEKLGFRFVDIDQEIEK-EEGKKIKDIFREKGESYFRDLEKR 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+++ VV+TGGG N R M++ G ++L+ PL+ + R G D PLL
Sbjct: 63 MIERFLGSKNLVVSTGGGLGADSENMRKMKENGTVIWLDTPLETVFERCK--GDDERPLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVS 249
+ + + L ++R + YA AD +S
Sbjct: 121 KKNRKE--------IKELFEKRKKIYAQADIRIS 146
>gi|322418911|ref|YP_004198134.1| shikimate kinase [Geobacter sp. M18]
gi|320125298|gb|ADW12858.1| Shikimate kinase [Geobacter sp. M18]
Length = 172
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 87/150 (58%), Gaps = 10/150 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG GKT+VG +L+ L + F D D+ + + G S+ +IF + GE YFRE ES+
Sbjct: 7 IFLTGFMGCGKTSVGHLLAQRLGWDFVDLDQVIVE-EAGQSIKEIFADHGEPYFRELESR 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L +++ QVV+TGGGAV+ N MRQ G V L ++ +A+R++ G+ PLL
Sbjct: 66 MLVRVATRTGQVVSTGGGAVIARGNRAVMRQYGSIVNLTASVETIAQRVS--GSSERPLL 123
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANAD 245
D++ ++ A R E YA+AD
Sbjct: 124 ANDASCERIRSMLA------AREEFYADAD 147
>gi|430376185|ref|ZP_19430588.1| shikimate kinase [Moraxella macacae 0408225]
gi|429541416|gb|ELA09444.1| shikimate kinase [Moraxella macacae 0408225]
Length = 196
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKTT+G++L+ L Y F DSD +E++ G SV+ IF + GE FR+ ES+
Sbjct: 10 IVLIGPMGAGKTTIGKLLASQLGYRFFDSDHEIERV-SGASVSWIFDKEGEMGFRQRESR 68
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARR 203
L +L+ Q V+ATGGGAV+ PLN ++++GI ++L +D R
Sbjct: 69 TLDELTQCQQVVLATGGGAVMTPLNQAYLKRGIVIYLKAQVDIQYER 115
>gi|212638754|ref|YP_002315274.1| shikimate kinase [Anoxybacillus flavithermus WK1]
gi|212560234|gb|ACJ33289.1| Shikimate kinase [Anoxybacillus flavithermus WK1]
Length = 179
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 92/165 (55%), Gaps = 16/165 (9%)
Query: 90 SCLDG----QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKES 145
S L+G + ++L G MG+GKTTVG L + L D+D Y+E+ +G T + +IF E
Sbjct: 4 SVLEGRGNMKAIYLTGFMGAGKTTVGRRLGEVLQLPVIDTDAYIEQQVGKT-ITKIFAEE 62
Query: 146 GEAYFREYESKALQKLSLVPQQ--VVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALAR 202
GE FR YE AL+KL P++ ++ TGGG V++ N +FMR+ GI ++L+ L L R
Sbjct: 63 GEEAFRAYERDALKKL---PKERVIITTGGGIVIQEENRQFMREHGIVIYLHCELHELFR 119
Query: 203 RIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
R+A ++ PLL + + F A + EA+ D T
Sbjct: 120 RLA--DDETRPLLMENKQSQIKQLFEQRLAWYR---EAHMTIDTT 159
>gi|95928758|ref|ZP_01311504.1| Shikimate kinase [Desulfuromonas acetoxidans DSM 684]
gi|95135103|gb|EAT16756.1| Shikimate kinase [Desulfuromonas acetoxidans DSM 684]
Length = 169
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 92/179 (51%), Gaps = 23/179 (12%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++ VG MGSGK+TVG++L+DAL F D D V K S+ IF+E GE FR YES+
Sbjct: 6 IYFVGFMGSGKSTVGKLLADALGMGFIDLDDEVVKRQQ-RSINAIFREEGEDVFRRYESE 64
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L++ S+ V +TGGG + NW+ M G+ VFL + R+ G+ PL+
Sbjct: 65 LLKEFSVKEGLVFSTGGGIIGSERNWQIMNSCGVVVFLACSWPTVLARLE--GSSERPLV 122
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEV 274
+ + +S L AL + R E Y AD + DV ++TP + +E+
Sbjct: 123 NQNDLES-------LKALYESRQELYRRADVQI------------DVDELTPEEVVLEI 162
>gi|433444492|ref|ZP_20409364.1| shikimate kinase family protein [Anoxybacillus flavithermus
TNO-09.006]
gi|432001520|gb|ELK22395.1| shikimate kinase family protein [Anoxybacillus flavithermus
TNO-09.006]
Length = 168
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 90/161 (55%), Gaps = 16/161 (9%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ ++L G MG+GKTTVG L + L D+D Y+E+ +G T + +IF E GE FR YE
Sbjct: 2 KAIYLTGFMGAGKTTVGRRLGEVLQLPVIDTDAYIEQQVGKT-ITKIFAEEGEETFRAYE 60
Query: 155 SKALQKLSLVPQQ--VVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS 211
AL+KL P++ ++ TGGG V++ N +FMR+ GI ++L+ L+ L RR+A ++
Sbjct: 61 RDALKKL---PKEHVIITTGGGIVIQEENRQFMREHGIVIYLHCELNELFRRLA--DDET 115
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
PLL + + F ++R Y A T+ N
Sbjct: 116 RPLLMGNKQKQMKQLF-------EQRLPFYQEAHMTIDTTN 149
>gi|400289033|ref|ZP_10791065.1| shikimate kinase [Psychrobacter sp. PAMC 21119]
Length = 173
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
Query: 103 MGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLS 162
MG+GKTT+G +L+ L TF DSD Y+E G +A IF + GEA FRE E++A+ +LS
Sbjct: 1 MGAGKTTIGRLLAKQLGRTFVDSDWYIES-QTGADIAWIFAKEGEAGFRERETRAIDELS 59
Query: 163 LVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
Q V+ATGGGAV+ N F++Q GI V+LN P+D R A S PLL
Sbjct: 60 QQKQIVLATGGGAVMAAENREFLKQRGIVVYLNAPVDVQMARTAK--DKSRPLL 111
>gi|257454915|ref|ZP_05620163.1| shikimate kinase [Enhydrobacter aerosaccus SK60]
gi|257447625|gb|EEV22620.1| shikimate kinase [Enhydrobacter aerosaccus SK60]
Length = 178
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 88/153 (57%), Gaps = 10/153 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKTT+G++L+ L +TF DSD+ +E+ + G S++ IF++ GE FR+ E++
Sbjct: 10 IILIGPMGAGKTTIGKLLAQQLGFTFYDSDQEIER-VSGASISWIFEKEGEVGFRQRETR 68
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
L KL+ + V+ATGGGAV N F+++GI ++L +D R + PLL
Sbjct: 69 VLDKLTHLDHVVLATGGGAVTIAENHHFLKRGIIIYLRAEVDIQYERTCR--DRNRPLLQ 126
Query: 217 YDSADSYTKAFTALSALSKERSEAYAN-ADATV 248
D+ L+ L +R Y AD T+
Sbjct: 127 IDNPKQ------KLTELFCKRDPIYQQLADITI 153
>gi|217969270|ref|YP_002354504.1| shikimate kinase [Thauera sp. MZ1T]
gi|217506597|gb|ACK53608.1| Shikimate kinase [Thauera sp. MZ1T]
Length = 176
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
CL L+GMMG+GKTTVG+ L+ FAD D+ + G S+ IF+ GEA FR E+
Sbjct: 3 CLILIGMMGAGKTTVGKELARRRRMRFADCDQAIVARTG-VSIPTIFELEGEAGFRRRET 61
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
+ + +L+ P V+ATGGG VV PLN MR+ GI ++L+VP L R
Sbjct: 62 QMIDELTREPDLVLATGGGVVVTPLNRELMRERGIVIYLDVPTQVLFER 110
>gi|187779496|ref|ZP_02995969.1| hypothetical protein CLOSPO_03092 [Clostridium sporogenes ATCC
15579]
gi|187773121|gb|EDU36923.1| shikimate kinase [Clostridium sporogenes ATCC 15579]
Length = 174
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 84/156 (53%), Gaps = 13/156 (8%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q + L+GM SGK+T+G LS L Y F D+D +E++ G ++ +IFK GE YFRE E
Sbjct: 6 QNIILIGMPLSGKSTLGRELSKILKYDFIDTDVLIEEI-EGENIKEIFKIYGEDYFREKE 64
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
+ + KL +V++TGGG + N ++ G TV+L VPL+ L +R+ ++ P
Sbjct: 65 LEIINKLKKEKNKVISTGGGLPIYNGNIYKLKNIGFTVYLKVPLEELIKRMVKKENNTRP 124
Query: 214 LLDYDSA-----------DSYTKAFTALSALSKERS 238
LL + D Y KA T + SKE S
Sbjct: 125 LLKNNDTKFLEGMYKERIDIYEKAHTIICNTSKEES 160
>gi|114800012|ref|YP_758815.1| shikimate kinase [Hyphomonas neptunium ATCC 15444]
gi|114740186|gb|ABI78311.1| shikimate kinase [Hyphomonas neptunium ATCC 15444]
Length = 186
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 10/158 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
+G+ + LVG+MG+GK+TVG L++ L F DSD +EK G S++ IF + GEA FR
Sbjct: 14 FEGRTIALVGLMGAGKSTVGRRLAEKLGRDFYDSDHEIEK-AAGLSISDIFAKHGEADFR 72
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTD 210
E + +++L + V+ATGGGA + P +R+ ITV+LN L+ L RR+ D
Sbjct: 73 RGEKQVIRRLLDLQPHVLATGGGAYLDPDTRAILRERAITVWLNADLETLWRRVQK--RD 130
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
+ PLL A + L+ L+ +R Y+ AD V
Sbjct: 131 TRPLLQRADARDH------LANLALDREPFYSQADLVV 162
>gi|334127294|ref|ZP_08501222.1| shikimate kinase [Centipeda periodontii DSM 2778]
gi|333389794|gb|EGK60952.1| shikimate kinase [Centipeda periodontii DSM 2778]
Length = 177
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 87/154 (56%), Gaps = 9/154 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKT+VG +L+ L F D DK +E+ G S+ +F E GE YFR E +
Sbjct: 8 VVLIGFMGTGKTSVGRLLAGRLGCAFHDLDKKIEE-QHGMSIPAMFAEHGEPYFRAREKE 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A++ + V+ATGGG V P N +RQ G+ V L +D + RR AA G + P+L
Sbjct: 67 AVRAAAERTNLVIATGGGTVKDPENVALLRQNGVIVALTADVDTILRRTAARG--ARPVL 124
Query: 216 DY-DSADSYTKAFTALSALSKERSEAYANADATV 248
D+ D+ D A+ L +ER Y +AD TV
Sbjct: 125 DHADAGDRR----AAVVRLLEERRALYEDADITV 154
>gi|440229680|ref|YP_007343473.1| shikimate kinase [Serratia marcescens FGI94]
gi|440051385|gb|AGB81288.1| shikimate kinase [Serratia marcescens FGI94]
Length = 175
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G+GKTTVG L+ A+DY F D D ++++ SVA+I + G FR E
Sbjct: 3 QTIFMVGARGAGKTTVGRALAQAMDYRFIDIDLFMQQTT-QMSVAEIVAQEGWQGFRRRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS 211
S ALQ ++ P +VATGGGAV+ N RFMRQ G ++L P + LA+R+ A D+
Sbjct: 62 SLALQAVT-KPSTIVATGGGAVLAEENRRFMRQHGTVIYLRAPAEVLAQRLEAFPQDA 118
>gi|333368298|ref|ZP_08460507.1| shikimate kinase [Psychrobacter sp. 1501(2011)]
gi|332977544|gb|EGK14315.1| shikimate kinase [Psychrobacter sp. 1501(2011)]
Length = 182
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 78/122 (63%), Gaps = 4/122 (3%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
LF+VG MG+GKTT+G +L+ L TF DSD Y+ + G + IF++ GEA FRE E+
Sbjct: 7 SLFIVGPMGAGKTTIGRLLAKHLGRTFIDSDHYICE-QTGADIPWIFEKEGEAGFREREA 65
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPL 214
KA+ +L+ +P V+ATGGG V +P N + ++ GIT++L +D +R + S PL
Sbjct: 66 KAIAELTELPDIVLATGGGVVTQPQNRQNLKNHGITIYLRANVDVQLKRTSK--DKSRPL 123
Query: 215 LD 216
L+
Sbjct: 124 LN 125
>gi|170758536|ref|YP_001787227.1| shikimate kinase [Clostridium botulinum A3 str. Loch Maree]
gi|238688746|sp|B1KT67.1|AROK_CLOBM RecName: Full=Shikimate kinase; Short=SK
gi|169405525|gb|ACA53936.1| shikimate kinase [Clostridium botulinum A3 str. Loch Maree]
Length = 170
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM SGK+T+G LS L Y D+D +E+ M S+ +IFK GE YFRE E
Sbjct: 2 ENIILIGMPLSGKSTLGRELSKILKYDLIDTDTLIEE-MEDKSIKEIFKIYGEDYFREKE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
K + KL +V++TGGG + N + + G TV+L VPL+ L +R+ D+ P
Sbjct: 61 LKIINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEDDARP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL D L + K R E Y A +
Sbjct: 121 LLKNDDT-------KFLEEMYKNRIEIYEKAHTII 148
>gi|410460581|ref|ZP_11314256.1| shikimate kinase [Bacillus azotoformans LMG 9581]
gi|409926839|gb|EKN63991.1| shikimate kinase [Bacillus azotoformans LMG 9581]
Length = 164
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 95/183 (51%), Gaps = 28/183 (15%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +FL G MGSGKTT+G++LS+ L D+D +E+ + T + IF+ GE FREYE
Sbjct: 2 KSIFLTGFMGSGKTTIGKLLSEKLSLPVIDTDHVIEEKLNKT-IRDIFETEGENKFREYE 60
Query: 155 SKALQKLSLVPQQ--VVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS 211
Q L ++P + ++ TGGG ++R N +M++ G+ V+L+ + + R+A G +
Sbjct: 61 H---QFLEMMPTENMIITTGGGIILRKENRDWMKKNGVVVYLHCEPEEILNRLA--GDQT 115
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIA 271
PLLD D + FT ERS Y AD V D + TP +
Sbjct: 116 RPLLDGDKKKNVLSIFT-------ERSPFYHEADFKV------------DTTNKTPEEVV 156
Query: 272 MEV 274
+E+
Sbjct: 157 LEI 159
>gi|197117942|ref|YP_002138369.1| shikimate kinase [Geobacter bemidjiensis Bem]
gi|197087302|gb|ACH38573.1| shikimate kinase [Geobacter bemidjiensis Bem]
Length = 170
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 10/150 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F+ G MG GKT+VG +LS L +TF D D+ + GTS+ +IF GE FR E+
Sbjct: 5 IFITGFMGCGKTSVGRVLSQRLGWTFVDLDQVIVD-RAGTSIKEIFASKGEPAFRAVETA 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
AL +++ QVV+TGGGAV+ P N MR G V L ++ +A R+ G PLL
Sbjct: 64 ALAEVASRQSQVVSTGGGAVIAPQNREAMRGSGRIVNLTASVETIAARV--TGDSERPLL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANAD 245
D+ + +S++ + R E YA+AD
Sbjct: 122 AADA------SVERISSMLQGREEYYADAD 145
>gi|148652212|ref|YP_001279305.1| shikimate kinase [Psychrobacter sp. PRwf-1]
gi|172048468|sp|A5WCG4.1|AROK_PSYWF RecName: Full=Shikimate kinase; Short=SK
gi|148571296|gb|ABQ93355.1| shikimate kinase [Psychrobacter sp. PRwf-1]
Length = 180
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 77/122 (63%), Gaps = 4/122 (3%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
LF+VG MG+GKTTVG++L+ L F DSD Y+ + G + IF++ GE FRE E+
Sbjct: 7 SLFIVGPMGAGKTTVGKLLAKHLGRDFIDSDHYICE-QTGADIPWIFEKEGETGFREREA 65
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNW-RFMRQGITVFLNVPLDALARRIAAVGTDSFPL 214
+A+ +L+ +P V+ATGGG V++P N +QGIT++L +D +R A S PL
Sbjct: 66 RAIAELTALPNVVLATGGGVVMQPQNRDNLTKQGITIYLRANVDVQLKRTAK--DKSRPL 123
Query: 215 LD 216
L+
Sbjct: 124 LN 125
>gi|424836154|ref|ZP_18260811.1| shikimate kinase [Clostridium sporogenes PA 3679]
gi|365977556|gb|EHN13655.1| shikimate kinase [Clostridium sporogenes PA 3679]
Length = 170
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM SGK+T+G LS L Y F D+D +E++ G S+ +IFK GE YFRE E
Sbjct: 2 ENIILIGMPLSGKSTLGRELSKILKYDFIDTDILIEEI-EGKSIKEIFKIYGEDYFREKE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
+ + KL +V++TGGG + N ++ G TV+L VPL+ L +R+ + P
Sbjct: 61 LEIINKLKKENNKVISTGGGLPIYNGNIYKLKNIGFTVYLKVPLEELIKRMVKKANNIRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + L + KER E Y A +
Sbjct: 121 LLKNNDTK-------FLEGMYKERIEIYEKAHTII 148
>gi|225016817|ref|ZP_03706009.1| hypothetical protein CLOSTMETH_00729 [Clostridium methylpentosum
DSM 5476]
gi|224950485|gb|EEG31694.1| hypothetical protein CLOSTMETH_00729 [Clostridium methylpentosum
DSM 5476]
Length = 165
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 6/164 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++L G MG GK+TVG + + + F D D+Y+EK G T + +IF++ GE FR E++
Sbjct: 4 IYLCGFMGCGKSTVGRLTAKQMSMKFLDLDEYIEKKHGCT-IPEIFEQRGEQAFRALETE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L++L+ ++ATGGG +V PLN RQ G VFL++P D RIA G + P++
Sbjct: 63 TLRELAATSGYIIATGGGTMVSPLNAEIARQNGSIVFLDLPFDTCYERIA--GDSNRPVV 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL 259
+S + F L R+ A + DA+ S +++ I L
Sbjct: 121 QSNSRAGLLEIFNYRVPLY--RAHATYSVDASHSPKSISEQIKL 162
>gi|404474947|ref|YP_006706378.1| shikimate kinase [Brachyspira pilosicoli B2904]
gi|404436436|gb|AFR69630.1| shikimate kinase [Brachyspira pilosicoli B2904]
Length = 147
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 80/125 (64%), Gaps = 5/125 (4%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +F++G+ GSGK+ + ++L++ +DYTF D DK +E T + +IF++SGE YFRE E
Sbjct: 7 KTIFVIGLPGSGKSDLSKLLAEYIDYTFFDMDKVIESREKKT-INKIFEDSGEEYFREVE 65
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S L++LS + V++TGGGA+++ N M++ GI +F++ P + + I + P
Sbjct: 66 SDVLEELSNIKNAVISTGGGAILKEKNRVLMKERGIVIFIDRPAELIVNNI---NVSARP 122
Query: 214 LLDYD 218
LL D
Sbjct: 123 LLVQD 127
>gi|229496775|ref|ZP_04390486.1| shikimate kinase [Porphyromonas endodontalis ATCC 35406]
gi|229316321|gb|EEN82243.1| shikimate kinase [Porphyromonas endodontalis ATCC 35406]
Length = 179
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MGSGK+T+G L+D ++ F D+D ++E+ SVA +F GE FR E+
Sbjct: 8 IFLVGYMGSGKSTIGRRLADRMEREFIDTDIFIERRF-HESVANMFTSVGEEAFRRREAV 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
+++LS P V+ATGGG N M Q G+TVFL V LD LA+RI
Sbjct: 67 VIEELSGFPNAVIATGGGLPCHHGNMELMNQCGVTVFLQVSLDNLAKRI 115
>gi|163869347|ref|YP_001610603.1| shikimate kinase [Bartonella tribocorum CIP 105476]
gi|161019050|emb|CAK02608.1| Shikimate kinase [Bartonella tribocorum CIP 105476]
Length = 196
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 22/202 (10%)
Query: 86 REVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKES 145
R++ S LD Q L VG+MG+GK+ +G+ ++ LD F DSD+ +EK S+ +IFK
Sbjct: 16 RQILSSLDNQALVFVGLMGAGKSVIGKRVATMLDLPFYDSDQEIEK-AAQMSITEIFKIY 74
Query: 146 GEAYFREYESKALQKLSLVPQQVVATGGGAVV-RPLNWRFMRQGITVFLNVPLDALARRI 204
GE FR E + + L V+ATGGGA + + + + GI ++L LD L +R+
Sbjct: 75 GEGEFRSLEQRIIFNLIKKRPLVLATGGGAYINQEIRKTIHQNGIPIWLKADLDILMQRV 134
Query: 205 AAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLD 264
+ T PLL + + L ++R YA A+ T++ K+
Sbjct: 135 SKRPTR--PLLQTANPKE------TMQKLMEQRYPLYAKANVTIN--------SHKE--- 175
Query: 265 ITPTTIAMEVLVQAQKYLNSKR 286
+P ++A V+ Q YL++KR
Sbjct: 176 -SPHSVAKNVIRSLQHYLHTKR 196
>gi|224007048|ref|XP_002292484.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972126|gb|EED90459.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 293
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 12/174 (6%)
Query: 73 DSLDGKWLLKA-KGREVASCLDGQCLFLVGMMGSGKTTVGEILSDAL-DYTFADSDKYVE 130
D +G LK R ++ L G L+ +GMMGSGK+ VG+ L+ + Y F D+D +E
Sbjct: 80 DDTNGTTTLKVDPARLLSPRLQGCNLYFIGMMGSGKSAVGDALARRMGTYNFLDTDVILE 139
Query: 131 KLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGIT 190
+ G S+ +IF+ GE FRE E++ L + + VV+TGGG ++R NW ++ G+
Sbjct: 140 R-AAGMSIPKIFQTEGEEAFREAEAQVLDSVHAHVRCVVSTGGGMILRNQNWSKLQTGLV 198
Query: 191 VFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANA 244
V+L V + + +RI GTD PLL + L +L +ER E Y A
Sbjct: 199 VYLKVEPEVIMKRIE--GTDR-PLLQTED------PLETLRSLMEERRERYEQA 243
>gi|163816773|ref|ZP_02208136.1| hypothetical protein COPEUT_02963 [Coprococcus eutactus ATCC 27759]
gi|158448030|gb|EDP25025.1| shikimate dehydrogenase [Coprococcus eutactus ATCC 27759]
Length = 458
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 12/157 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG GKTTVG ++ L Y D D Y+EK G S++QIF + GE YFRE E+
Sbjct: 294 IILIGFMGCGKTTVGTAVAGRLGYNLLDVDLYIEK-EAGCSISQIFADKGEQYFRELETD 352
Query: 157 ALQKLSL-VPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPL 214
L+KL+ + V++TGGG +RP N +R+ G ++L+V + + RR++ G S PL
Sbjct: 353 TLKKLNASISHTVISTGGGLPMRPENAEELRKLGTVIYLDVQPEEVIRRLS--GDTSRPL 410
Query: 215 LDYDSADSYTKAFTALSALSKERSEAY-ANADATVSL 250
L D + ++ L ER Y + AD + +
Sbjct: 411 LQGDDVER------KVNRLMDERRPVYESEADCVIPV 441
>gi|404372139|ref|ZP_10977438.1| hypothetical protein CSBG_00552 [Clostridium sp. 7_2_43FAA]
gi|226911725|gb|EEH96926.1| hypothetical protein CSBG_00552 [Clostridium sp. 7_2_43FAA]
Length = 163
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 90/153 (58%), Gaps = 14/153 (9%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
+D + L+GM G GK+T+GE L++ ++Y F D DKY+E++ T V ++F S E YFR
Sbjct: 1 MDKNIILLIGMPGCGKSTIGEELANKINYDFCDMDKYIEEISNST-VKELFNIS-EEYFR 58
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTD 210
+YE+ A ++LS + ++++GGG + R N F + +GI +F++ P++ + + I T
Sbjct: 59 DYETLACKELSNKSKIIISSGGGVIKRKKNIDFFKDKGIIIFIDRPIEDILKDI---DTS 115
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYAN 243
S PLL +D +K + S ER Y N
Sbjct: 116 SRPLL----SDGKSKLYNLYS----ERYNLYNN 140
>gi|126462247|ref|YP_001043361.1| shikimate kinase [Rhodobacter sphaeroides ATCC 17029]
gi|126103911|gb|ABN76589.1| shikimate kinase [Rhodobacter sphaeroides ATCC 17029]
Length = 193
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 91/169 (53%), Gaps = 11/169 (6%)
Query: 82 KAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQI 141
+ GR+V + L + + +VGMMG+GKT VG L+ L+ F DSD+ +E+ T +A+I
Sbjct: 7 REDGRQVMARLK-KTVVMVGMMGAGKTAVGSALARGLNVPFLDSDEEIERAANRT-IAEI 64
Query: 142 FKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDAL 200
F GE +FRE ES+ L +L V++TGGGA + N R +R QG++V+L LD L
Sbjct: 65 FARDGEPFFREKESQVLARLLRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWLKADLDVL 124
Query: 201 ARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
R+ T PLL + L AL + R YA AD V
Sbjct: 125 WHRVRHKATR--PLLRTPNPRE------TLRALLEARDPVYAQADLAVE 165
>gi|149184269|ref|ZP_01862587.1| shikimate kinase [Erythrobacter sp. SD-21]
gi|148831589|gb|EDL50022.1| shikimate kinase [Erythrobacter sp. SD-21]
Length = 189
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 87/156 (55%), Gaps = 16/156 (10%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L LVG+MG GK+T+G L+ AL+ F D+D+ +E+ SVA+IF+ GEAYFR+ E +
Sbjct: 24 LVLVGLMGVGKSTIGRRLATALERDFVDADEEIER-AANRSVAEIFEAHGEAYFRDGERR 82
Query: 157 ALQKLSLVPQQVVATGGGAVV----RPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSF 212
+ +L V+ATGGGA V R L + QG+ ++L+ LD L R + D+
Sbjct: 83 VIARLMEEGHGVIATGGGAFVDDETRAL---VLEQGLAIWLDCDLDTLVERTSR--KDTR 137
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
PLL S D T L L + RS AYA A V
Sbjct: 138 PLL--KSGDPR----TILRDLKERRSAAYAQAQVHV 167
>gi|347761774|ref|YP_004869335.1| shikimate kinase [Gluconacetobacter xylinus NBRC 3288]
gi|347580744|dbj|BAK84965.1| shikimate kinase / 3-dehydroquinate synthase [Gluconacetobacter
xylinus NBRC 3288]
Length = 585
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 85/156 (54%), Gaps = 10/156 (6%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
GQ + +VG+MG+GKTT+G IL+ L F DSD+ +E+ G S+A +F++ GE FR
Sbjct: 45 GQTIVMVGLMGAGKTTIGRILAARLGLPFVDSDEEIER-AAGCSIADLFQKYGEPEFRRG 103
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSF 212
E +++L P V+ATGGGA + P +R ++++L PL L +R+A
Sbjct: 104 ERLVIRRLLSGPPVVLATGGGAFMDPRTRASVRAHAVSIWLRCPLPLLVQRVAE--RTHR 161
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
PLL+ T L+ L + R YA AD V
Sbjct: 162 PLLN------NTSPHAVLADLMRIRHPVYAEADIIV 191
>gi|114327280|ref|YP_744437.1| 3-dehydroquinate synthase [Granulibacter bethesdensis CGDNIH1]
gi|114315454|gb|ABI61514.1| shikimate kinase [Granulibacter bethesdensis CGDNIH1]
Length = 590
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 89/159 (55%), Gaps = 12/159 (7%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ + LVG+MG+GKT++G L+ L F D+D +E+ G SVA+IF GE+ FR
Sbjct: 49 LQGRSIVLVGLMGAGKTSIGRRLAARLGMPFRDADAEIER-AAGCSVAEIFARHGESGFR 107
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQG-ITVFLNVPLDALARRIAAVGTD 210
+ E + +++L V+ATGGGA + P R +R+G ++++L L L +R++ G
Sbjct: 108 QGERRVVRRLLSEEPLVLATGGGAFMDPETRRVIREGAVSIWLRCRLPVLLKRVS--GRT 165
Query: 211 SFPLLDY-DSADSYTKAFTALSALSKERSEAYANADATV 248
PLL+ D AD L L ER YA AD V
Sbjct: 166 HRPLLNQGDPAD-------ILQRLMNERHPVYAEADLIV 197
>gi|421848539|ref|ZP_16281527.1| shikimate kinase [Acetobacter pasteurianus NBRC 101655]
gi|421851731|ref|ZP_16284424.1| shikimate kinase [Acetobacter pasteurianus subsp. pasteurianus LMG
1262 = NBRC 106471]
gi|371460900|dbj|GAB26730.1| shikimate kinase [Acetobacter pasteurianus NBRC 101655]
gi|371480234|dbj|GAB29627.1| shikimate kinase [Acetobacter pasteurianus subsp. pasteurianus LMG
1262 = NBRC 106471]
Length = 588
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 85/156 (54%), Gaps = 10/156 (6%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G+ + LVG+MG+GKTT+G L+ L F D+D +E+ G S+A +F+ GEA FR+
Sbjct: 48 GRSIVLVGLMGAGKTTIGRPLATRLGLPFVDADVEIER-AAGCSIADVFRLYGEAAFRDG 106
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSF 212
E + +++L P V+ATGGGA + +R+ ++++L PL L RR++ G
Sbjct: 107 ERRVIRRLLEGPPMVLATGGGAFMDSTTRALVRERAVSIWLRCPLPVLVRRVS--GRTHR 164
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
PLL+ S + A+ R YA AD V
Sbjct: 165 PLLNTTSPREVLENLMAI------RHPVYAEADIIV 194
>gi|395211601|ref|ZP_10399407.1| shikimate kinase [Pontibacter sp. BAB1700]
gi|394457675|gb|EJF11796.1| shikimate kinase [Pontibacter sp. BAB1700]
Length = 171
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 85/157 (54%), Gaps = 6/157 (3%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +FL+GMMG+GKTT+G L++ L YTF D D+Y+E+ G S+AQ+F G FR+ E
Sbjct: 4 QRIFLIGMMGAGKTTLGRQLAERLGYTFVDLDEYLEQ-REGCSIAQLFAAGGHEGFRQKE 62
Query: 155 SKALQK-LSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSF 212
+A++ + Q VVATGGG N F+ Q G ++FL+VP + L +R+
Sbjct: 63 RQAMESVVQEFEQAVVATGGGTPCFFDNMAFINQHGTSIFLDVPSEELTQRLLLTNLSQR 122
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
PLL S + A ER Y A TVS
Sbjct: 123 PLLAQKSEEELKDFIVKTLA---ERLVFYKQAKYTVS 156
>gi|258541882|ref|YP_003187315.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-01]
gi|384041803|ref|YP_005480547.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-12]
gi|384050318|ref|YP_005477381.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-03]
gi|384053428|ref|YP_005486522.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-07]
gi|384056660|ref|YP_005489327.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-22]
gi|384059301|ref|YP_005498429.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-26]
gi|384062595|ref|YP_005483237.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-32]
gi|384118671|ref|YP_005501295.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256632960|dbj|BAH98935.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-01]
gi|256636017|dbj|BAI01986.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-03]
gi|256639072|dbj|BAI05034.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-07]
gi|256642126|dbj|BAI08081.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-22]
gi|256645181|dbj|BAI11129.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-26]
gi|256648236|dbj|BAI14177.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-32]
gi|256651289|dbj|BAI17223.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654280|dbj|BAI20207.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-12]
Length = 577
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 85/156 (54%), Gaps = 10/156 (6%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G+ + LVG+MG+GKTT+G L+ L F D+D +E+ G S+A +F+ GEA FR+
Sbjct: 37 GRSIVLVGLMGAGKTTIGRPLATRLGLPFVDADVEIER-AAGCSIADVFRLYGEAAFRDG 95
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSF 212
E + +++L P V+ATGGGA + +R+ ++++L PL L RR++ G
Sbjct: 96 ERRVIRRLLEGPPMVLATGGGAFMDSTTRALVRERAVSIWLRCPLPVLVRRVS--GRTHR 153
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
PLL+ S + A+ R YA AD V
Sbjct: 154 PLLNTTSPREVLENLMAI------RHPVYAEADIIV 183
>gi|329114346|ref|ZP_08243108.1| 3-dehydroquinate synthase [Acetobacter pomorum DM001]
gi|326696422|gb|EGE48101.1| 3-dehydroquinate synthase [Acetobacter pomorum DM001]
Length = 596
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 85/156 (54%), Gaps = 10/156 (6%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G+ + LVG+MG+GKTT+G L+ L F D+D +E+ G S+A +F+ GEA FR+
Sbjct: 56 GRSIVLVGLMGAGKTTIGRPLATRLGLPFVDADVEIER-AAGCSIADVFRLYGEAAFRDG 114
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSF 212
E + +++L P V+ATGGGA + +R+ ++++L PL L RR++ G
Sbjct: 115 ERRVIRRLLEGPPMVLATGGGAFMDSTTRALVRERAVSIWLRCPLPVLVRRVS--GRTHR 172
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
PLL+ S + A+ R YA AD V
Sbjct: 173 PLLNTTSPRDVLENLMAI------RHPVYAEADIIV 202
>gi|312130327|ref|YP_003997667.1| shikimate kinase [Leadbetterella byssophila DSM 17132]
gi|311906873|gb|ADQ17314.1| Shikimate kinase [Leadbetterella byssophila DSM 17132]
Length = 177
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 88/157 (56%), Gaps = 12/157 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F++GM SGK+T+G L+ L+Y F D DK +E L G +++IF GE YFR+ E++
Sbjct: 5 IFMIGMPSSGKSTLGRQLAKELNYEFIDLDKKIE-LAEGRKISEIFNLEGEEYFRKIETE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+++ + V+ATGGG N F+++ GI+VFL+V L R+ ++ PL
Sbjct: 64 HLKRIEPNSRLVIATGGGTPCNGNNMDFIKENGISVFLDVKPKKLEERMRNSKKNNRPLY 123
Query: 216 DYDS---ADSYTKAFTALSALSKERSEAYANADATVS 249
+ +S D+ TK + ++R E Y AD +
Sbjct: 124 NLESELLVDTLTKTY-------EDRIETYKRADIVIE 153
>gi|429768911|ref|ZP_19301039.1| shikimate kinase [Brevundimonas diminuta 470-4]
gi|429188262|gb|EKY29150.1| shikimate kinase [Brevundimonas diminuta 470-4]
Length = 189
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 87/157 (55%), Gaps = 10/157 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVG+MG GK+TVG L+ L FAD D+ +E+ G +V++IF GEA FR E
Sbjct: 16 RTIALVGLMGVGKSTVGRRLAQRLGLPFADGDQVIEE-AAGMTVSEIFASRGEAEFRAGE 74
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
++ +++L P V+ATGGGAV+ P M+Q ++V++ L +A R+ D+ P
Sbjct: 75 ARVMRRLLEGPPIVLATGGGAVLNPDTRALMKQHAVSVWMRADLKVIAERVGR--RDTRP 132
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
LL AL+ L++ R Y AD TV +
Sbjct: 133 LL------RGRDPLVALNELARARYPIYGQADVTVDV 163
>gi|78486474|ref|YP_392399.1| shikimate kinase [Thiomicrospira crunogena XCL-2]
gi|116257514|sp|Q31DP8.1|AROK_THICR RecName: Full=Shikimate kinase; Short=SK
gi|78364760|gb|ABB42725.1| shikimate kinase [Thiomicrospira crunogena XCL-2]
Length = 174
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 92/172 (53%), Gaps = 11/172 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +FLVG MG+GK+TVG L+D L Y F DSD+ +E G T + IF GE+ FR E
Sbjct: 4 ESIFLVGPMGAGKSTVGRFLADKLHYQFLDSDQVIEDKTGAT-IPMIFDIEGESGFRARE 62
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
A+ L+ + V+ATGGGA++ P N + +R +G V+L +D+L +R + P
Sbjct: 63 KAAIDDLTQQSEIVLATGGGAILNPENRKNLRSRGFVVYLKSSVDSLVQRTRH--DRNRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACIGLKDVLD 264
LL ++ + L L +ER Y AD + ++ +K +LD
Sbjct: 121 LLQTENPEQ------VLRKLIEERGPLYEEVADLVIQTEQVSVHRVVKQILD 166
>gi|345304321|ref|YP_004826223.1| shikimate kinase [Rhodothermus marinus SG0.5JP17-172]
gi|345113554|gb|AEN74386.1| Shikimate kinase [Rhodothermus marinus SG0.5JP17-172]
Length = 192
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 5/121 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++L G MG GK+T+G +L+ L YTF D D +E+ G S+ +IF E GEA FR E +
Sbjct: 11 IYLTGFMGCGKSTIGPLLARRLGYTFLDLDALIER-QAGRSIPEIFAEGGEAAFRALERE 69
Query: 157 ALQKLSLVPQQVVATGGGAVVRP--LNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPL 214
AL++ + V+ATGGGA+V L W +R G V+L V D LARR+A T PL
Sbjct: 70 ALRRTVALDACVIATGGGALVSDDNLAW-ALRNGRVVYLQVSADELARRLAPEATHR-PL 127
Query: 215 L 215
L
Sbjct: 128 L 128
>gi|226949197|ref|YP_002804288.1| shikimate kinase [Clostridium botulinum A2 str. Kyoto]
gi|254806773|sp|C1FPC6.1|AROK_CLOBJ RecName: Full=Shikimate kinase; Short=SK
gi|226841126|gb|ACO83792.1| shikimate kinase [Clostridium botulinum A2 str. Kyoto]
Length = 170
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM SGK+T+G LS L Y D+D +E+ M S+ +IFK GE YFRE E
Sbjct: 2 ENIVLIGMPLSGKSTLGRELSKILKYDLIDTDTLIEE-MEDKSIKEIFKIYGEDYFREKE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
K + KL +V++TGGG + N + + G TV+L VPL+ L +R+ D+ P
Sbjct: 61 LKIINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + L + K R E Y A +
Sbjct: 121 LLKNNDTK-------FLEEMYKNRIEIYEKAHTII 148
>gi|354582434|ref|ZP_09001336.1| Shikimate kinase [Paenibacillus lactis 154]
gi|353199833|gb|EHB65295.1| Shikimate kinase [Paenibacillus lactis 154]
Length = 161
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 11/158 (6%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
++GMMG+GK+TVG +++D L+Y+ D D +E+ M G S+ IF GE FR+ E+ AL
Sbjct: 1 MIGMMGTGKSTVGRLVADHLNYSLVDLDAEIER-MAGKSIPDIFAADGEGCFRDIETAAL 59
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLLDY 217
+++ Q++ATGGGAV+RP N M R G V L D + R+ G + PLL
Sbjct: 60 REVLHRTSQIIATGGGAVLRPENCEAMKRGGWVVALTADADTIVERVR--GDANRPLLAG 117
Query: 218 DSADSYTKAFTALSALSKERSEAYANADATVSLLNLAA 255
+ + + ++ ER++ Y AD V L A
Sbjct: 118 NVEER-------VQSILMERADKYRFADLMVDTAGLTA 148
>gi|315500432|ref|YP_004089235.1| shikimate kinase [Asticcacaulis excentricus CB 48]
gi|315418444|gb|ADU15084.1| Shikimate kinase [Asticcacaulis excentricus CB 48]
Length = 186
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 85/152 (55%), Gaps = 12/152 (7%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
LVG+MG GKTTVG L++AL F D+D+ +EK G SV+ IF GEA FR+ E K +
Sbjct: 20 LVGLMGVGKTTVGRRLAEALAVPFRDADEEIEK-AAGLSVSDIFAAFGEAGFRDGEQKVI 78
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL-D 216
+L Q++ATGGGA V+P +RQ +TV+L L +ARR+A + PLL D
Sbjct: 79 SRLLDDGPQILATGGGAFVQPATHDIIRQKAVTVWLKTDLRVIARRVA--NRNHRPLLRD 136
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADATV 248
D + L +R YA AD TV
Sbjct: 137 RDPME-------VLREHEAKRYPFYAKADITV 161
>gi|395778862|ref|ZP_10459373.1| shikimate kinase [Bartonella elizabethae Re6043vi]
gi|423714710|ref|ZP_17688934.1| shikimate kinase [Bartonella elizabethae F9251]
gi|395417037|gb|EJF83389.1| shikimate kinase [Bartonella elizabethae Re6043vi]
gi|395430929|gb|EJF96957.1| shikimate kinase [Bartonella elizabethae F9251]
Length = 196
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 108/204 (52%), Gaps = 26/204 (12%)
Query: 86 REVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKES 145
R++ S LD Q L VG+MG+GK+ +G ++ LD F DSD+ +EK S+ +IFK
Sbjct: 16 RQILSSLDNQALVFVGLMGAGKSVIGRRVATILDLPFYDSDQEIEK-AAQMSITEIFKIY 74
Query: 146 GEAYFREYESKALQKLSLVPQQ--VVATGGGAVV-RPLNWRFMRQGITVFLNVPLDALAR 202
GEA FR E + + L+L+ ++ V+ATGGGA + + + + GI+++L LD L +
Sbjct: 75 GEAEFRSLEQRVI--LNLIKKRPLVLATGGGAYINQEIRKAIQQNGISLWLKADLDILMQ 132
Query: 203 RIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDV 262
R++ T PLL ++ + L ++R YA A+ T++ K+
Sbjct: 133 RVSKRPTR--PLLQTENPKE------TMQKLMEQRYPLYAKANVTIN--------SHKE- 175
Query: 263 LDITPTTIAMEVLVQAQKYLNSKR 286
+P +A V+ Q YL +K+
Sbjct: 176 ---SPYGVAKNVIRSLQHYLYTKK 196
>gi|310780186|ref|YP_003968518.1| shikimate kinase [Ilyobacter polytropus DSM 2926]
gi|309749509|gb|ADO84170.1| Shikimate kinase [Ilyobacter polytropus DSM 2926]
Length = 171
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G MGSGK+TVG ILS+ L Y+F D+D VEK S++ +F+E GE YFRE E K
Sbjct: 5 IFLIGFMGSGKSTVGHILSEKLGYSFVDTDNIVEKDW-EMSISSMFEEHGENYFREREYK 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
AL+K+ QVV+TGGG V + + +++V + + +R+ + T PLL
Sbjct: 64 ALKKIIENKNQVVSTGGGIVTFEKSRELLEGQEVYYIDVDSETVYKRLKSDNTR--PLLK 121
Query: 217 YDSADSYTKAFTALSALSKERSEAYANA 244
+F +S L R + Y N
Sbjct: 122 -------NCSFEKMSDLLSFRKKIYENT 142
>gi|402298894|ref|ZP_10818544.1| shikimate kinase [Bacillus alcalophilus ATCC 27647]
gi|401725901|gb|EJS99162.1| shikimate kinase [Bacillus alcalophilus ATCC 27647]
Length = 168
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 12/155 (7%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ ++L G MGSGKTTVGE L AL D+D+++E++ T + ++F+ GE YFRE E
Sbjct: 3 RIVYLTGFMGSGKTTVGEGLGKALGVQVIDTDQWIEQIENET-IKELFQTKGERYFREKE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
++AL K+ P +V TGGG V++ N MR +G VFL+ +D + R+A G + P
Sbjct: 62 TEALVKIQQYP-LIVTTGGGIVLKEENRELMRNKGAVVFLDCKIDEIFDRVA--GDSTRP 118
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL S K + +R AY A V
Sbjct: 119 LLQNKSKAEIKKMYD-------DRKTAYLEAATIV 146
>gi|304394163|ref|ZP_07376086.1| shikimate kinase [Ahrensia sp. R2A130]
gi|303293603|gb|EFL87980.1| shikimate kinase [Ahrensia sp. R2A130]
Length = 205
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+ L G+ + LVG+MG GK+T+G+ LS LD F D+DK +EK G SV IF + GE
Sbjct: 21 IRRALGGRSIVLVGIMGVGKSTIGKRLSQYLDIEFVDADKEIEK-AAGMSVQDIFDQFGE 79
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVV-RPLNWRFMRQGITVFLNVPLDALARRIAA 206
FR E K +++L Q+++ATGGGA + + G++V+LN +D L +R+
Sbjct: 80 EAFRTGEKKVIKRLMGEGQKILATGGGAFMNEDIRNDIAEGGVSVWLNADIDILMKRVQR 139
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDI 265
PLL + ++ + A+ +ER+ YA AD + ++ + +V+D+
Sbjct: 140 --RSDRPLLKTEDPEA------TMRAMLEERNPIYALADVQIESRTVSRDVIAGEVVDL 190
>gi|421836390|ref|ZP_16270888.1| shikimate kinase, partial [Clostridium botulinum CFSAN001627]
gi|409741753|gb|EKN41438.1| shikimate kinase, partial [Clostridium botulinum CFSAN001627]
Length = 178
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
V + + + L+GM SGK+T+G LS L Y D+D +E+ M S+ +IFK GE
Sbjct: 3 VKMVVSLENIVLIGMPLSGKSTLGRELSKILKYDLIDTDTLIEE-MEDKSIKEIFKIYGE 61
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAA 206
YFRE E K + KL +V++TGGG + N + + G TV+L VPL+ L +R+
Sbjct: 62 DYFREKELKIINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVK 121
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
D+ PLL + L + K R E Y A +
Sbjct: 122 KEYDTRPLLKNNDTK-------FLEEMYKNRIEIYEKAHTII 156
>gi|148379860|ref|YP_001254401.1| shikimate kinase [Clostridium botulinum A str. ATCC 3502]
gi|153930849|ref|YP_001384157.1| shikimate kinase [Clostridium botulinum A str. ATCC 19397]
gi|153934761|ref|YP_001387698.1| shikimate kinase [Clostridium botulinum A str. Hall]
gi|168180487|ref|ZP_02615151.1| shikimate kinase [Clostridium botulinum NCTC 2916]
gi|229508975|sp|A7FUV4.1|AROK_CLOB1 RecName: Full=Shikimate kinase; Short=SK
gi|229509144|sp|A5I323.1|AROK_CLOBH RecName: Full=Shikimate kinase; Short=SK
gi|148289344|emb|CAL83440.1| shikimate kinase [Clostridium botulinum A str. ATCC 3502]
gi|152926893|gb|ABS32393.1| shikimate kinase [Clostridium botulinum A str. ATCC 19397]
gi|152930675|gb|ABS36174.1| shikimate kinase [Clostridium botulinum A str. Hall]
gi|182668782|gb|EDT80760.1| shikimate kinase [Clostridium botulinum NCTC 2916]
Length = 170
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM SGK+T+G LS L Y D+D +E+ M S+ +IFK GE YFRE E
Sbjct: 2 ENIVLIGMPLSGKSTLGRELSKILKYDLIDTDTLIEE-MEDKSIKEIFKIYGEDYFREKE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
K + KL +V++TGGG + N + + G TV+L VPL+ L +R+ D+ P
Sbjct: 61 LKIINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + L + K R E Y A +
Sbjct: 121 LLKNNDT-------KFLEEMYKNRIEIYEKAHTII 148
>gi|373457548|ref|ZP_09549315.1| Shikimate kinase [Caldithrix abyssi DSM 13497]
gi|371719212|gb|EHO40983.1| Shikimate kinase [Caldithrix abyssi DSM 13497]
Length = 186
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 95/165 (57%), Gaps = 8/165 (4%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ ++L G MG+GK+ +G L+D L+ F D+D+ +EK++G T V +IF+E GEA+FR+ E
Sbjct: 4 RHIYLTGFMGAGKSRIGRHLADLLNLPFVDTDQEIEKMVGKT-VRRIFEEEGEAFFRKQE 62
Query: 155 SKALQKLSLVP-QQVVATGGGAV--VRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
++ ++++S P +VVA GGGA+ R L R GI ++L +A+ +R+A +
Sbjct: 63 AEIVRQVSQHPAPRVVALGGGALNDSRSLE-NIHRSGIVIYLKSAPEAIFKRVAH--SRK 119
Query: 212 FPLLDYDSA-DSYTKAFTALSALSKERSEAYANADATVSLLNLAA 255
PLLD D A D + L ++R Y AD + L A
Sbjct: 120 RPLLDVDEAPDREAILVKRIEDLLQKREGLYLQADIIIDRDGLEA 164
>gi|415885484|ref|ZP_11547412.1| shikimate kinase [Bacillus methanolicus MGA3]
gi|387591153|gb|EIJ83472.1| shikimate kinase [Bacillus methanolicus MGA3]
Length = 167
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 89/143 (62%), Gaps = 5/143 (3%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ ++L+G MGSGKTTVG+ +S ++ D+D+ +EK + S+ QIF+E+GE +FR E
Sbjct: 2 KAIYLIGFMGSGKTTVGKSMSAKWNWPVFDTDEELEKKV-KKSINQIFEENGEEFFRLLE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+++ V + ++ TGGG V++ N R+M++ G+ VFL + + +RI DS P
Sbjct: 61 SEILKQMP-VNRSIITTGGGIVLKEENRRWMKENGVVVFLYAEPEEIFKRIE--NDDSRP 117
Query: 214 LLDYDSADSYTKAFTALSALSKE 236
LL + + + F A +L KE
Sbjct: 118 LLKTNKKAAIKELFQARLSLYKE 140
>gi|329922662|ref|ZP_08278214.1| shikimate kinase [Paenibacillus sp. HGF5]
gi|328942004|gb|EGG38287.1| shikimate kinase [Paenibacillus sp. HGF5]
Length = 172
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 90/163 (55%), Gaps = 11/163 (6%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G+ + L+GMMG+GK+TVG +++D+L Y D D +E+ M G +++++F++ GE YFRE
Sbjct: 7 GRNIILIGMMGTGKSTVGRLVADSLGYNLIDLDSEIER-MEGRTISEMFEKDGEPYFREA 65
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSF 212
ES AL+ + L V+A+GGGAV+R N M R G V L ++ R+ G +
Sbjct: 66 ESAALRSVLLRDGIVLASGGGAVLRSDNCDVMKRGGWVVALTADAASIVERVR--GDANR 123
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAA 255
PLL D + + ER + Y AD V + +A
Sbjct: 124 PLLAGDVEERVRRIL-------DERKDKYRFADVMVDTVGRSA 159
>gi|365969207|ref|YP_004950768.1| shikimate kinase [Enterobacter cloacae EcWSU1]
gi|365748120|gb|AEW72347.1| Shikimate kinase 2 [Enterobacter cloacae EcWSU1]
Length = 174
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 87/153 (56%), Gaps = 15/153 (9%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +FLVG G GKTTVG L+ A D F D+D +++ G S+A+I ++ G FR E
Sbjct: 3 QPIFLVGPRGCGKTTVGLELARACDRQFVDTDHWLQT-EAGKSIAEIVEQEGWGSFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+ AL+ ++ P V+ATGGG V+ N RFMR+ GI ++L+ P+ AL R+ ++FP
Sbjct: 62 TAALKAVT-TPSAVIATGGGIVLAECNRRFMREKGIVIYLSAPVSALVGRL-----EAFP 115
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADA 246
+ A T+ LS+E SE A DA
Sbjct: 116 ------EEGQRPALTS-RPLSEEVSEVLAERDA 141
>gi|434383184|ref|YP_006704967.1| shikimate kinase [Brachyspira pilosicoli WesB]
gi|404431833|emb|CCG57879.1| shikimate kinase [Brachyspira pilosicoli WesB]
Length = 174
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 13/146 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F++G+ GSGK+ + ++L++ ++YTF D DK +E T + +IF++ GE YFRE ES
Sbjct: 9 IFVIGLPGSGKSDLSKLLAEYINYTFFDMDKVIESREKKT-INKIFEDRGEEYFREVESD 67
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L++LS + VV+TGGGA+++ N M++ GI +F++ P + + I PLL
Sbjct: 68 VLEELSNIKNAVVSTGGGAILKEKNRALMKERGIVIFIDRPAELIVNNI---NVSERPLL 124
Query: 216 DYDSADSYTKAFTALSALSKERSEAY 241
D L LSK+R Y
Sbjct: 125 VQDK--------NKLIELSKKRDALY 142
>gi|377578792|ref|ZP_09807767.1| shikimate kinase 2 [Escherichia hermannii NBRC 105704]
gi|377539875|dbj|GAB52932.1| shikimate kinase 2 [Escherichia hermannii NBRC 105704]
Length = 174
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 75/113 (66%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFLVG G GKTTVG+ L+ +L + F D+D+++ + G +VA+I ++ G A FR E
Sbjct: 3 QPLFLVGPRGCGKTTVGQGLAASLGFQFTDTDRWLLE-HSGETVAEIVEKEGWAGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
S+ALQ ++ P V+ATGGG V+ N FMR QG ++L VP + LA+R+ A
Sbjct: 62 SQALQAVA-APATVIATGGGMVLAEANRSFMRNQGQVIYLQVPAETLAQRLQA 113
>gi|421076082|ref|ZP_15537084.1| Shikimate kinase [Pelosinus fermentans JBW45]
gi|392525941|gb|EIW49065.1| Shikimate kinase [Pelosinus fermentans JBW45]
Length = 176
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+G MG+GKTTVG +L++ L F DSDK +E S+ +IF+ GE YFR+ E
Sbjct: 2 KNIVLIGFMGTGKTTVGRLLANRLGRPFFDSDKKIE-YENNLSIREIFEVYGELYFRQQE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFP 213
+ KLS V+ATGGG V+ N + R G+ + L ++ + R + T P
Sbjct: 61 KMIIAKLSRYNNAVIATGGGVVLSLENMNNLKRNGVIITLTASVETILERTSRRNTR--P 118
Query: 214 LL-DYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL D+D + ++ L KER+E Y NAD +++
Sbjct: 119 LLDDFDQREK------IVNKLLKERAELYYNADYSIN 149
>gi|392426605|ref|YP_006467599.1| shikimate kinase [Desulfosporosinus acidiphilus SJ4]
gi|391356568|gb|AFM42267.1| shikimate kinase [Desulfosporosinus acidiphilus SJ4]
Length = 175
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 82/153 (53%), Gaps = 12/153 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GK+TVG L+ AL + F D+D + + SV++IF+ GE FR ES
Sbjct: 4 IVLIGFMGTGKSTVGRRLAQALSWNFVDTDAEIGDVTE-LSVSEIFRRYGETRFRSEESI 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+ +L+ + V+ATGGG V+ P+NW + Q GI V L PL+ + +RI + PLL
Sbjct: 63 VVTRLAQTEEIVIATGGGTVLNPINWEVLAQNGIIVSLYAPLEVILQRIGH--KNDRPLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
+ + L ER Y AD T+
Sbjct: 121 RSSPEE--------IKTLFLERQPFYGKADFTI 145
>gi|329889982|ref|ZP_08268325.1| shikimate kinase family protein [Brevundimonas diminuta ATCC 11568]
gi|328845283|gb|EGF94847.1| shikimate kinase family protein [Brevundimonas diminuta ATCC 11568]
Length = 189
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 86/157 (54%), Gaps = 10/157 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVG+MG GK+TVG L+ L FAD D +E+ G +V++IF GE FR E
Sbjct: 16 RTIALVGLMGVGKSTVGRRLAARLGLPFADGDHVIEE-AAGMTVSEIFATRGEVEFRAGE 74
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
++ +++L P V+ATGGGAV+ P M+Q ++V++ L +A R+ D+ P
Sbjct: 75 ARVMKRLLEGPPIVLATGGGAVLNPDTRALMKQHAVSVWMRADLKVIAERVGR--RDTRP 132
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
LL TAL+ L+K R Y AD TV +
Sbjct: 133 LL------RNRDPLTALNDLAKARYPIYGEADLTVDV 163
>gi|429463041|ref|YP_007184504.1| shikimate kinase [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451811821|ref|YP_007448276.1| shikimate kinase [Candidatus Kinetoplastibacterium crithidii
TCC036E]
gi|429338555|gb|AFZ82978.1| shikimate kinase [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451776979|gb|AGF47978.1| shikimate kinase [Candidatus Kinetoplastibacterium crithidii
TCC036E]
Length = 209
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 104/189 (55%), Gaps = 19/189 (10%)
Query: 57 VSKDSNAHDVESGTFCDS---LDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEI 113
+SK S A+ ++S +F +S +D ++ + D +FLVGMMG+GK+T+G
Sbjct: 3 ISKKSQANYIKSTSFDESHQNIDKDYVTSKQ------LCDKTPIFLVGMMGAGKSTIGRS 56
Query: 114 LSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGG 173
L+ ++ F D D +E G + IF+ GE+ FR+ ES LQK SL + V+ATGG
Sbjct: 57 LAQYMERKFVDLDCEIEA-SCGVKIPVIFEIEGESGFRKRESDFLQKYSLDEKIVLATGG 115
Query: 174 GAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSA 232
GA++ P N + ++ +GI ++L LD L +R ++ + PLL + D Y K L +
Sbjct: 116 GAILSPHNRQILKSRGIVIYLKAELDVLFKRTSS--DHNRPLL--ATKDPYLK----LQS 167
Query: 233 LSKERSEAY 241
L K R Y
Sbjct: 168 LLKLREPMY 176
>gi|315646136|ref|ZP_07899256.1| Shikimate kinase [Paenibacillus vortex V453]
gi|315278335|gb|EFU41651.1| Shikimate kinase [Paenibacillus vortex V453]
Length = 170
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 90/163 (55%), Gaps = 11/163 (6%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G+ + L+GMMG+GK+TVG +++D+L YT D D +EKL G T + ++F+ GE+YFRE
Sbjct: 5 GKNIILIGMMGTGKSTVGRLVADSLGYTLIDLDTEIEKLDGRT-IPEMFEADGESYFREA 63
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSF 212
ES AL+ + L VVA+GGGAV+ N M+Q G V L ++ R+ G +
Sbjct: 64 ESAALRSVLLRKGIVVASGGGAVLSSENCEAMKQGGWVVALTADAASIVERVR--GDVNR 121
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAA 255
PLL D + + ER + Y AD + + +A
Sbjct: 122 PLLAGDVEERVGRIL-------DERKDKYLFADVMLDTVGRSA 157
>gi|376261192|ref|YP_005147912.1| shikimate kinase [Clostridium sp. BNL1100]
gi|373945186|gb|AEY66107.1| shikimate kinase [Clostridium sp. BNL1100]
Length = 195
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG GKTTVG +LS+AL+Y F D D +++ ++ +F+ GEAYFR+ E+K
Sbjct: 6 IVLIGFMGVGKTTVGNVLSNALNYNFYDCDNIIKQQFS-MNIKDLFELYGEAYFRDVEAK 64
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIA---AVGTDSF 212
+++LS + V+ATGGG V+ P N + + GI +FL + R I+ T+
Sbjct: 65 VIKELSNSSKSVIATGGGIVLNPSNIYNLKKNGIIIFLEALPATILRNISKDNVKSTEDR 124
Query: 213 PLL 215
PLL
Sbjct: 125 PLL 127
>gi|83590399|ref|YP_430408.1| shikimate kinase [Moorella thermoacetica ATCC 39073]
gi|115312153|sp|Q2RI74.1|AROK_MOOTA RecName: Full=Shikimate kinase; Short=SK
gi|83573313|gb|ABC19865.1| shikimate kinase [Moorella thermoacetica ATCC 39073]
Length = 173
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 13/151 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MGSGKTTVG +L+ L ++F D+D VE+ +G V +IF GE +FRE E +
Sbjct: 5 IVLIGFMGSGKTTVGRLLARDLGWSFLDTDTMVEERLG-LPVKEIFAREGEEFFREVEKE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQG-ITVFLNV-PLDALARRIAAVGTDSFPL 214
A+ +++ Q V+ATGGGAV+ +N + +R+G V+L V P AL R A DS PL
Sbjct: 64 AVARVATARQAVIATGGGAVLCGVNVKLLREGNKVVWLQVRPETALKR---AGLDDSRPL 120
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYANAD 245
L ++AL + R YA AD
Sbjct: 121 LQGREPRD-------IAALLRRREPYYAFAD 144
>gi|332558270|ref|ZP_08412592.1| shikimate kinase [Rhodobacter sphaeroides WS8N]
gi|332275982|gb|EGJ21297.1| shikimate kinase [Rhodobacter sphaeroides WS8N]
Length = 180
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + +VGMMG+GKT VG L+ L+ F DSD+ +E+ T +A+IF GE +FRE E
Sbjct: 6 KTVVMVGMMGAGKTAVGSALARGLNVPFLDSDEEIERAANRT-IAEIFARDGEPFFREKE 64
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
S+ L +L V++TGGGA + N R +R QG++V+L LD L R+ T P
Sbjct: 65 SQVLARLLRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWLKADLDVLWHRVRHKATR--P 122
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL + L AL + R YA AD V
Sbjct: 123 LLRTPNPRE------TLRALLEARDPVYAQADLAVE 152
>gi|300870692|ref|YP_003785563.1| shikimate kinase [Brachyspira pilosicoli 95/1000]
gi|431808479|ref|YP_007235377.1| shikimate kinase [Brachyspira pilosicoli P43/6/78]
gi|300688391|gb|ADK31062.1| shikimate kinase [Brachyspira pilosicoli 95/1000]
gi|430781838|gb|AGA67122.1| shikimate kinase [Brachyspira pilosicoli P43/6/78]
Length = 173
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 86/148 (58%), Gaps = 13/148 (8%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +F++G+ GSGK+ + ++L++ ++Y+F D DK +E T + +IF+++GE YFRE E
Sbjct: 6 KTIFVIGLPGSGKSDLSKLLAEYINYSFFDMDKVIESREKKT-INKIFEDNGEEYFREVE 64
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S L++LS + V++TGGGA+++ N M++ GI +F++ P + + I P
Sbjct: 65 SDVLEELSNIKNAVISTGGGAILKEKNRALMKERGIVIFIDRPAELIVNNI---NVSERP 121
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAY 241
LL D L LSK+R Y
Sbjct: 122 LLVQDK--------NKLIELSKKRDALY 141
>gi|167644690|ref|YP_001682353.1| shikimate kinase [Caulobacter sp. K31]
gi|167347120|gb|ABZ69855.1| Shikimate kinase [Caulobacter sp. K31]
Length = 198
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 10/181 (5%)
Query: 84 KGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFK 143
+G + + L + + LVG+MG GK++VG L+ ALD F D+D VE G S+ +IF
Sbjct: 13 EGTDPRAALRHKTIVLVGLMGVGKSSVGRRLATALDLPFRDADNEVEA-AAGRSIPEIFA 71
Query: 144 ESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALAR 202
E GE FR+ E + + +L P V+ATGGGA P ++ + I V+L L+ LAR
Sbjct: 72 EMGEPAFRDGERRVIARLLEEPPHVLATGGGAFANPETRALIKSKAIAVWLKADLELLAR 131
Query: 203 RIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDV 262
R+ + PLL LS ++ R AY A TV + A + ++ V
Sbjct: 132 RVGR--KEGRPLL------KGRDPIAVLSEHAQARYPAYGEAHLTVETGDTAHGVAVEAV 183
Query: 263 L 263
+
Sbjct: 184 I 184
>gi|392960627|ref|ZP_10326094.1| Shikimate kinase [Pelosinus fermentans DSM 17108]
gi|421054615|ref|ZP_15517581.1| shikimate kinase [Pelosinus fermentans B4]
gi|421058832|ref|ZP_15521481.1| Shikimate kinase [Pelosinus fermentans B3]
gi|421067652|ref|ZP_15529107.1| Shikimate kinase [Pelosinus fermentans A12]
gi|421071478|ref|ZP_15532595.1| Shikimate kinase [Pelosinus fermentans A11]
gi|392440604|gb|EIW18277.1| shikimate kinase [Pelosinus fermentans B4]
gi|392446997|gb|EIW24263.1| Shikimate kinase [Pelosinus fermentans A11]
gi|392448830|gb|EIW26006.1| Shikimate kinase [Pelosinus fermentans A12]
gi|392454871|gb|EIW31685.1| Shikimate kinase [Pelosinus fermentans DSM 17108]
gi|392460024|gb|EIW36375.1| Shikimate kinase [Pelosinus fermentans B3]
Length = 176
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+G MG+GKTTVG +L++ L F DSDK +E S+ +IF+ GE YFR+ E
Sbjct: 2 KNIVLIGFMGTGKTTVGRLLANRLGRPFFDSDKKIE-YENNLSIREIFEVYGELYFRQQE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFP 213
+ KLS V+ATGGG V+ N + R G+ + L ++ + R + T P
Sbjct: 61 KMIIAKLSRYNNAVIATGGGVVLSFENMNNLKRNGVIITLTASVETILERTSRRNTR--P 118
Query: 214 LL-DYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL D+D + ++ L KER+E Y NAD +++
Sbjct: 119 LLDDFDQREK------IVNKLLKERAELYYNADYSIN 149
>gi|260426001|ref|ZP_05779980.1| shikimate kinase [Citreicella sp. SE45]
gi|260420493|gb|EEX13744.1| shikimate kinase [Citreicella sp. SE45]
Length = 185
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 89/156 (57%), Gaps = 10/156 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVGMMG+GKT VG+ L+ AL F DSD +E L ++A+IF GE +FRE E
Sbjct: 8 KTVVLVGMMGAGKTAVGKALAHALRVPFRDSDAEIE-LAANMTIAEIFSRDGEPFFRERE 66
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFP 213
S+ + +L V++TGGGA +R N R + ++G+ V+L+ L L R+ D+ P
Sbjct: 67 SQVIARLLDGRPSVLSTGGGAYMREENRRMITKRGVAVWLDAALPVLWNRVK--HKDTRP 124
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL +AD + L + +R YA +D TVS
Sbjct: 125 LL--RTADPH----ATLREIYCKRVPIYALSDLTVS 154
>gi|354598807|ref|ZP_09016824.1| Shikimate kinase [Brenneria sp. EniD312]
gi|353676742|gb|EHD22775.1| Shikimate kinase [Brenneria sp. EniD312]
Length = 173
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 94/164 (57%), Gaps = 7/164 (4%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G GKTTVG L+ AL Y F D+D ++++ G +VA+I + G FR+ E
Sbjct: 3 QPIFMVGARGCGKTTVGSRLAQALGYEFIDTDLFMQQ-SGRMTVAEIVAQEGWQGFRQRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTD-SF 212
S+ LQ+++ ++VVATGGG V+ LN RFM +G V+L+ P + LARR+ A D
Sbjct: 62 SRVLQEVTAC-RRVVATGGGIVLSALNRRFMGDKGSVVYLHAPAELLARRLEASPLDHQR 120
Query: 213 PLLD-YDSADSYTKAFTALSALSKERSEAYANA--DATVSLLNL 253
P L A+ A AL +E + +A D T+ + N+
Sbjct: 121 PTLTGRPIAEEMADVLAAREALYREVAHHVIDATQDPTIIVENV 164
>gi|354558141|ref|ZP_08977397.1| Shikimate kinase [Desulfitobacterium metallireducens DSM 15288]
gi|353548866|gb|EHC18310.1| Shikimate kinase [Desulfitobacterium metallireducens DSM 15288]
Length = 175
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+G MG+GKT+VG+ L+ L + F D+D +E++ GTSV++IF++ GE FR E
Sbjct: 4 ENIVLIGFMGTGKTSVGKRLAKHLGWDFLDTDLAIEEI-SGTSVSEIFRKHGETRFRSEE 62
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWR-FMRQGITVFLNVPLDALARRIAAVGTDSFP 213
+ +++L + V+ATGGG + P NW F GI + L P+D + RI G + P
Sbjct: 63 TVLVKRLKERKKMVIATGGGTPLNPENWEAFTEIGIIISLYAPIDTILDRIG--GKNDRP 120
Query: 214 LL 215
LL
Sbjct: 121 LL 122
>gi|326802595|ref|YP_004320414.1| shikimate kinase [Sphingobacterium sp. 21]
gi|326553359|gb|ADZ81744.1| Shikimate kinase [Sphingobacterium sp. 21]
Length = 170
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 7/159 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDK-YVEKLMGGTSVAQIFKESGEAYFREYES 155
+FLVG MG GKTT G+ L+ AL+ F D D+ +VE+ G S+ FK+ GE FR E
Sbjct: 6 IFLVGFMGVGKTTNGKKLAQALNRKFIDLDETFVEQ--AGMSITDYFKKHGEKAFRVKER 63
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPL 214
LQ LS V+ATGGGA N +M + GIT++L +P ALA+R+A+ PL
Sbjct: 64 DILQNLSAPEAAVIATGGGAPCFFDNMEWMNKNGITIYLQIPTAALAKRLASSKRHKRPL 123
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNL 253
+ S + + F ++ R YA A +++++L
Sbjct: 124 IQDLSEE---QIFEFINERMLVRHPYYAQAHHHINVIDL 159
>gi|221639246|ref|YP_002525508.1| shikimate kinase [Rhodobacter sphaeroides KD131]
gi|221160027|gb|ACM01007.1| Shikimate kinase [Rhodobacter sphaeroides KD131]
Length = 181
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + +VGMMG+GKT VG L+ L+ F DSD+ +E+ T +A+IF GE +FRE E
Sbjct: 7 KTVVMVGMMGAGKTAVGSALARGLNVPFLDSDEEIERAANRT-IAEIFARDGEPFFREKE 65
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
S+ L +L V++TGGGA + N R +R QG++V+L LD L R+ T P
Sbjct: 66 SQVLARLLRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWLKADLDVLWHRVRHKATR--P 123
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL + L AL + R YA AD V
Sbjct: 124 LLRTPNPRE------TLRALLEARDPVYAQADLAVE 153
>gi|77463392|ref|YP_352896.1| shikimate kinase [Rhodobacter sphaeroides 2.4.1]
gi|429206448|ref|ZP_19197714.1| Shikimate kinase I [Rhodobacter sp. AKP1]
gi|124053400|sp|Q3J2I9.1|AROK_RHOS4 RecName: Full=Shikimate kinase; Short=SK
gi|77387810|gb|ABA78995.1| shikimate kinase [Rhodobacter sphaeroides 2.4.1]
gi|428190489|gb|EKX59035.1| Shikimate kinase I [Rhodobacter sp. AKP1]
Length = 181
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + +VGMMG+GKT VG L+ L+ F DSD+ +E+ T +A+IF GE +FRE E
Sbjct: 7 KTVVMVGMMGAGKTAVGSALARGLNVPFLDSDEEIERAANRT-IAEIFARDGEPFFREKE 65
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
S+ L +L V++TGGGA + N R +R QG++V+L LD L R+ T P
Sbjct: 66 SQVLARLLRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWLKADLDVLWHRVRHKATR--P 123
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL + L AL + R YA AD V
Sbjct: 124 LLRTPNPRE------TLRALLEARDPVYAQADLAVE 153
>gi|222529685|ref|YP_002573567.1| shikimate kinase [Caldicellulosiruptor bescii DSM 6725]
gi|254806763|sp|B9MKD6.1|AROK_ANATD RecName: Full=Shikimate kinase; Short=SK
gi|222456532|gb|ACM60794.1| Shikimate kinase [Caldicellulosiruptor bescii DSM 6725]
Length = 172
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 88/156 (56%), Gaps = 10/156 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L G MGSGKTT+G+++++ LD D+D V K G T + +IF+ GE FRE E
Sbjct: 2 KNIVLTGFMGSGKTTIGKLIAEKLDIELIDTDSEVIKEFGMT-IDKIFEVHGEKKFREVE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+K ++++S + V++TGGG V+ P N + +R+ G+ FL P +++ +R+ D+ P
Sbjct: 61 TKVIERVSKLENVVISTGGGVVLNPENVKLLRENGVIYFLYAPAESILKRLK--DDDTRP 118
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL + D + L+ R Y N D ++
Sbjct: 119 LL--KNGDKLSNIIRLLNM----RMPFYKNCDFEIN 148
>gi|261405755|ref|YP_003241996.1| Shikimate kinase [Paenibacillus sp. Y412MC10]
gi|261282218|gb|ACX64189.1| Shikimate kinase [Paenibacillus sp. Y412MC10]
Length = 172
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 89/163 (54%), Gaps = 11/163 (6%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G+ + L+GMMG+GK+TVG +++D+L Y D D +E+ M G +++++F+ GE YFRE
Sbjct: 7 GRNIILIGMMGTGKSTVGRLVADSLGYNLIDLDAEIER-MEGRTISEMFETEGEPYFREA 65
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSF 212
ES AL+ + L V+A+GGGAV+R N M R G V L ++ R+ G +
Sbjct: 66 ESAALRSVLLRDGIVLASGGGAVLRSDNCDVMKRGGWVVALTADAASIVERVR--GDANR 123
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAA 255
PLL D + + ER + Y AD V + +A
Sbjct: 124 PLLAGDVEERVRRIL-------DERKDKYRFADVMVDTVGRSA 159
>gi|387818109|ref|YP_005678454.1| shikimate kinase I [Clostridium botulinum H04402 065]
gi|322806151|emb|CBZ03719.1| shikimate kinase I [Clostridium botulinum H04402 065]
Length = 170
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM SGK+T+G LS L Y D+D +E+ M S+ +IFK GE YFRE E
Sbjct: 2 ENIVLIGMPLSGKSTLGRELSKILKYDLIDTDTLIEE-MEDKSIKEIFKIYGEDYFREKE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
+ + KL +V++TGGG + N + + G TV+L VPL+ L +R+ D+ P
Sbjct: 61 LEIINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + L + K R E Y A +
Sbjct: 121 LLKNNDT-------KFLEEMYKNRIEIYEKAHTII 148
>gi|296113650|ref|YP_003627588.1| shikimate kinase [Moraxella catarrhalis RH4]
gi|416157421|ref|ZP_11605164.1| shikimate kinase [Moraxella catarrhalis 101P30B1]
gi|416218596|ref|ZP_11625010.1| shikimate kinase [Moraxella catarrhalis 7169]
gi|416224551|ref|ZP_11626575.1| shikimate kinase [Moraxella catarrhalis 103P14B1]
gi|416231073|ref|ZP_11628655.1| shikimate kinase [Moraxella catarrhalis 46P47B1]
gi|416233261|ref|ZP_11629235.1| shikimate kinase [Moraxella catarrhalis 12P80B1]
gi|416238873|ref|ZP_11631556.1| shikimate kinase [Moraxella catarrhalis BC1]
gi|416243735|ref|ZP_11634070.1| shikimate kinase [Moraxella catarrhalis BC7]
gi|416248005|ref|ZP_11636097.1| shikimate kinase [Moraxella catarrhalis BC8]
gi|416252252|ref|ZP_11638087.1| shikimate kinase [Moraxella catarrhalis CO72]
gi|416255883|ref|ZP_11639452.1| shikimate kinase [Moraxella catarrhalis O35E]
gi|421780454|ref|ZP_16216943.1| shikimate kinase [Moraxella catarrhalis RH4]
gi|295921344|gb|ADG61695.1| shikimate kinase [Moraxella catarrhalis BBH18]
gi|326559644|gb|EGE10058.1| shikimate kinase [Moraxella catarrhalis 7169]
gi|326560016|gb|EGE10411.1| shikimate kinase [Moraxella catarrhalis 46P47B1]
gi|326562498|gb|EGE12815.1| shikimate kinase [Moraxella catarrhalis 103P14B1]
gi|326566934|gb|EGE17072.1| shikimate kinase [Moraxella catarrhalis 12P80B1]
gi|326567678|gb|EGE17784.1| shikimate kinase [Moraxella catarrhalis BC1]
gi|326568687|gb|EGE18758.1| shikimate kinase [Moraxella catarrhalis BC7]
gi|326568864|gb|EGE18934.1| shikimate kinase [Moraxella catarrhalis BC8]
gi|326572678|gb|EGE22667.1| shikimate kinase [Moraxella catarrhalis CO72]
gi|326574277|gb|EGE24225.1| shikimate kinase [Moraxella catarrhalis 101P30B1]
gi|326575063|gb|EGE24992.1| shikimate kinase [Moraxella catarrhalis O35E]
gi|407812610|gb|EKF83395.1| shikimate kinase [Moraxella catarrhalis RH4]
Length = 211
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+FLVG MG+GKTT+G++L+ L F D D Y+ G + IF++ GE FR+ E+
Sbjct: 27 AIFLVGPMGAGKTTIGKLLAKHLGRNFIDCDWYIVD-QTGADIPWIFEKEGEEGFRDRET 85
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDA-LAR 202
+ALQ+L+ +P ++ATGGGAV R N +++G+ ++L+ +D LAR
Sbjct: 86 RALQELTALPNIIMATGGGAVGRTKNRELLKKGLVIYLDASVDTQLAR 133
>gi|270307832|ref|YP_003329890.1| shikimate kinase [Dehalococcoides sp. VS]
gi|270153724|gb|ACZ61562.1| shikimate kinase [Dehalococcoides sp. VS]
Length = 176
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+G MG+GKT+V ++LS+ L T +D +E G S++ IFKE GE YFR+ ES+ L
Sbjct: 9 LIGFMGAGKTSVSKLLSEKLGKTLVSTDTCIETC-EGLSISSIFKEKGEEYFRQMESRVL 67
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLLDY 217
+ + P Q++ GGG V RP N MR + ++L + L R+ + PL +
Sbjct: 68 EDVCRQPNQIIDCGGGIVTRPQNLSIMRLNCLVIYLESRPEDLEARLK--NHTNRPLYNA 125
Query: 218 DSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
+ +D K + L ++ AD TVS N
Sbjct: 126 ERSDKMIKLLESRQPLYRD------AADITVSTHN 154
>gi|427431003|ref|ZP_18920699.1| Shikimate kinase I [Caenispirillum salinarum AK4]
gi|425878180|gb|EKV26899.1| Shikimate kinase I [Caenispirillum salinarum AK4]
Length = 200
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 83/155 (53%), Gaps = 10/155 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVG+MG+GK+ VG+ L+ L F D+D VEK G S+A IF GE FRE E
Sbjct: 18 RTVVLVGLMGAGKSVVGKRLAQRLHVPFIDADHEVEK-AAGQSIADIFATLGEDAFREGE 76
Query: 155 SKALQKLSLVPQQVVATGGGAVVRP-LNWRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
K + +L P V+A GGGA + P R R+GI+V+L LD L RR A G P
Sbjct: 77 RKVMARLLDGPVCVLAAGGGAFMCPETRRRVKRRGISVWLRADLDLLVRRTAGRG--HRP 134
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + D K L +L +R Y AD TV
Sbjct: 135 LL--NQGDPRAK----LESLMAQRYPVYETADVTV 163
>gi|259416680|ref|ZP_05740600.1| shikimate kinase [Silicibacter sp. TrichCH4B]
gi|259348119|gb|EEW59896.1| shikimate kinase [Silicibacter sp. TrichCH4B]
Length = 196
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 85/163 (52%), Gaps = 13/163 (7%)
Query: 90 SCLDGQ---CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
SC G+ + LVGMMG+GKT VG L+ LD F DSD +E S+ +IF G
Sbjct: 14 SCAPGKLKKTIVLVGMMGAGKTAVGRALAARLDVPFLDSDHEIEA-AANMSIPEIFARDG 72
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIA 205
E +FRE E + + +L V++TGGGA + N M + G++V L LD L +R+
Sbjct: 73 EPFFREKEHQVITRLLKEECGVLSTGGGAFLAERNRTVMSEAGVSVCLQADLDVLWKRVK 132
Query: 206 AVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
G D+ PLL S D Y +LS L R YA AD V
Sbjct: 133 --GRDTRPLL--RSPDPY----KSLSDLYHARVPIYAQADLKV 167
>gi|336324067|ref|YP_004604034.1| shikimate kinase [Flexistipes sinusarabici DSM 4947]
gi|336107648|gb|AEI15466.1| Shikimate kinase [Flexistipes sinusarabici DSM 4947]
Length = 167
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 92/159 (57%), Gaps = 10/159 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++L+G MGSGKT+VG+ L++ + TF D D+ +E+ G S+A+IF GE YFR+ E K
Sbjct: 4 IYLLGFMGSGKTSVGKRLAEKKNMTFIDLDEKIEE-SEGMSIAEIFAGKGEEYFRDVEKK 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L++LS + +VATGGGAV+ P N + M+ G+TV L + + R+ ++ PLL
Sbjct: 63 VLKELSAMDSCIVATGGGAVMDPENLQTMKNSGVTVSLLASPEIVHERVK--NSNLRPLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLA 254
+ ++ + L ER+ Y +D V +L+
Sbjct: 121 NVEN------PIDEIKKLMFERAAFYIKSDIIVDTSDLS 153
>gi|332981708|ref|YP_004463149.1| shikimate kinase [Mahella australiensis 50-1 BON]
gi|332699386|gb|AEE96327.1| Shikimate kinase [Mahella australiensis 50-1 BON]
Length = 173
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 95/183 (51%), Gaps = 22/183 (12%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G ++L G MG+GKTTVG +L+ L+ F D+D+++E+ MG T V IF GEA+FR+
Sbjct: 2 GNNIYLTGFMGTGKTTVGRLLAKELNMNFVDTDEFIEQGMGMT-VPSIFGIYGEAFFRQL 60
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSF 212
E AL ++ VV+TGGG V+R N MR+ G+ + L+ D + R + +
Sbjct: 61 EHNALISIAYRQGVVVSTGGGIVLRDDNINIMRRSGVMICLDASPDTVMRNVGS--GKGR 118
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAM 272
P+L D D + L +R + Y AD V ++ D TP TI+
Sbjct: 119 PVL--DGGDLRRN----IIELMDKRRQFYCQADIIV------------NIDDKTPETISD 160
Query: 273 EVL 275
E++
Sbjct: 161 EII 163
>gi|146277569|ref|YP_001167728.1| shikimate kinase [Rhodobacter sphaeroides ATCC 17025]
gi|145555810|gb|ABP70423.1| shikimate kinase [Rhodobacter sphaeroides ATCC 17025]
Length = 180
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 85/156 (54%), Gaps = 10/156 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + +VGMMG+GKT VG L+ AL F DSD+ +E+ T +A+IF GE +FRE E
Sbjct: 6 KTVVMVGMMGAGKTAVGTALARALAVPFLDSDEEIERAANRT-IAEIFARDGEPFFREKE 64
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
S+ L +L V++TGGGA + N R +R QG++V+L L+ L +R+ T P
Sbjct: 65 SQVLTRLLKGTPCVLSTGGGAFMAEANRRMIREQGVSVWLKADLEVLWQRVRHKATR--P 122
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL + L AL + R YA AD V
Sbjct: 123 LLRKPNPRE------TLRALLEARDPVYAQADLVVE 152
>gi|337748176|ref|YP_004642338.1| shikimate kinase [Paenibacillus mucilaginosus KNP414]
gi|379723033|ref|YP_005315164.1| shikimate kinase [Paenibacillus mucilaginosus 3016]
gi|386725823|ref|YP_006192149.1| shikimate kinase [Paenibacillus mucilaginosus K02]
gi|336299365|gb|AEI42468.1| shikimate kinase [Paenibacillus mucilaginosus KNP414]
gi|378571705|gb|AFC32015.1| shikimate kinase [Paenibacillus mucilaginosus 3016]
gi|384092948|gb|AFH64384.1| shikimate kinase [Paenibacillus mucilaginosus K02]
Length = 170
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 97/186 (52%), Gaps = 27/186 (14%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GMMG+GK+TVG+ L+ L + F D+D +E+ G T + ++F GEA+FRE E +
Sbjct: 6 IVLIGMMGTGKSTVGQALAARLGWRFVDTDAVIERNTGKT-IPELFAGEGEAFFREAERE 64
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQG--ITVFLNVPLDALARRIAAVGTDS-FP 213
A+ + QVVATGGGAV+R N R M +G + L P R I V TDS P
Sbjct: 65 AVAAVLKESGQVVATGGGAVLREENRRAMSEGGLVVALLCSP----ERIIERVRTDSNRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAME 273
LL + + + L++ R EAY AD V D ++ TIA +
Sbjct: 121 LLQGNLEER-------VHTLAENRREAYTFADLAV------------DTSELDVQTIADQ 161
Query: 274 VLVQAQ 279
+L A+
Sbjct: 162 ILRHAK 167
>gi|395232603|ref|ZP_10410853.1| shikimate kinase [Enterobacter sp. Ag1]
gi|394733005|gb|EJF32644.1| shikimate kinase [Enterobacter sp. Ag1]
Length = 174
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFLVG G GKTTVG+ L+ L Y F D+D ++ G SVA+I E G FR E
Sbjct: 3 QPLFLVGARGCGKTTVGQALARTLGYAFVDTDSFLLNHT-GKSVAEIVAEEGWEGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAA 206
S ALQ+++ P VVATGGG V+ N +FM++ GI V+L+ P LA R+ A
Sbjct: 62 SDALQRVT-APATVVATGGGMVLAEGNRQFMQENGIPVWLHAPAQVLASRLTA 113
>gi|302344636|ref|YP_003809165.1| shikimate kinase., 3-dehydroquinate synthase [Desulfarculus baarsii
DSM 2075]
gi|301641249|gb|ADK86571.1| Shikimate kinase., 3-dehydroquinate synthase [Desulfarculus baarsii
DSM 2075]
Length = 520
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 82/154 (53%), Gaps = 12/154 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MGSGK+TVG +L+ A+ F D D + + G +A++F + GEA FR+ ES
Sbjct: 5 IFLTGFMGSGKSTVGALLARAMGRKFVDMDSELTRHFG-QPIAEVFAQRGEAAFRQAESA 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ--GITVFLNVPLDALARRIAAVGTDSFPL 214
L +LS V ATGGG P N MR G V+L L+ ARR+ + T + PL
Sbjct: 64 LLARLSRRRGLVAATGGGVAANPANRALMRADGGRIVWLRAGLEHCARRLGPLETAARPL 123
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYANADATV 248
D+A A+ L +R EAYA+ D V
Sbjct: 124 W-RDAA--------AVERLFAQRQEAYADCDHAV 148
>gi|307129877|ref|YP_003881893.1| shikimate kinase [Dickeya dadantii 3937]
gi|306527406|gb|ADM97336.1| shikimate kinase II [Dickeya dadantii 3937]
Length = 173
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G GKTTVG+ L+ AL Y F D+D +++ G +VA + G FR E
Sbjct: 3 QPIFMVGARGCGKTTVGDELARALGYEFVDTDIFMQH-TSGLTVADVVAAEGWPGFRRRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
S+AL ++ P ++VATGGG V+ N +FMR QGI ++L+ P ALA+R+ A
Sbjct: 62 SEALHAVT-APNRIVATGGGMVLLEQNRQFMRAQGIVIYLHAPAQALAQRLQA 113
>gi|333371488|ref|ZP_08463438.1| shikimate kinase [Desmospora sp. 8437]
gi|332976162|gb|EGK13030.1| shikimate kinase [Desmospora sp. 8437]
Length = 175
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 25/195 (12%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G+ + L+G MG+GK+TVGE+L++ L+ + D+D VE+L G + ++F+E GEA+FR +
Sbjct: 3 GKHIILIGFMGTGKSTVGEMLAEKLECPWLDTDTEVERL-AGKKIPRLFEEGGEAHFRRW 61
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTD-S 211
E K L+++ V+ TGGG V+ P N ++R G V L+ + L RR+A TD S
Sbjct: 62 EKKVLKQVLEQTPGVITTGGGIVLDPENVSWIRSSGWVVALDASEEELLRRLA---TDQS 118
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIA 271
PLL D A + L + R Y AD + D +P A
Sbjct: 119 RPLLRGD-------ARQRVRDLKRARQGVYDFADLFL------------DTTGSSPRETA 159
Query: 272 MEVLVQAQKYLNSKR 286
++L Q ++ S R
Sbjct: 160 AKILQQWKEMTGSSR 174
>gi|303325897|ref|ZP_07356340.1| shikimate kinase [Desulfovibrio sp. 3_1_syn3]
gi|302863813|gb|EFL86744.1| shikimate kinase [Desulfovibrio sp. 3_1_syn3]
Length = 174
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 72/114 (63%), Gaps = 5/114 (4%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+FLVG +GKTTVG L+ LD F D+D+Y+ + + G SVA++ G FR +ES
Sbjct: 3 AIFLVGARAAGKTTVGLELARLLDCAFVDTDRYLRERL-GRSVAEVVSAEGWPGFRAHES 61
Query: 156 KALQKLSLVPQQ---VVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIA 205
L++++ + Q V+ATGGG V+ P N RFMR QG +L P +ALARR+A
Sbjct: 62 AVLREVAALHAQGGAVIATGGGMVLDPENRRFMRAQGTVFYLAAPAEALARRLA 115
>gi|389873926|ref|YP_006381345.1| shikimate kinase [Advenella kashmirensis WT001]
gi|388539175|gb|AFK64363.1| shikimate kinase [Advenella kashmirensis WT001]
Length = 191
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+GMMG+GKTT+G L+ +L F D D +E G S+ IF GEA FR E++
Sbjct: 19 IFLIGMMGAGKTTIGRGLARSLGREFLDLDHELEARCG-VSIPTIFDIEGEAGFRRRETQ 77
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIA 205
LQ+++L V+ATGGGAVV P N +R +GI ++L D L RR+A
Sbjct: 78 VLQEITLRRDVVLATGGGAVVAPENQELLRARGIVLYLKAGSDELFRRVA 127
>gi|15607112|ref|NP_214494.1| shikimate kinase [Aquifex aeolicus VF5]
gi|7673950|sp|O67925.1|AROK_AQUAE RecName: Full=Shikimate kinase; Short=SK
gi|2984356|gb|AAC07875.1| shikimate kinase [Aquifex aeolicus VF5]
Length = 168
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 84/153 (54%), Gaps = 12/153 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++L+G M SGK+TVG +LS +L+ F D D+ V+K G S+ QIF++ GEAYFR+ E +
Sbjct: 3 IYLIGFMCSGKSTVGSLLSRSLNIPFYDVDEEVQK-REGLSIPQIFEKKGEAYFRKLEFE 61
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
L+ LS V++TGGG FM+ +G TVF+++P + R + PLL
Sbjct: 62 VLKDLSEKENVVISTGGGLGANEEALNFMKSRGTTVFIDIPFEVFLERCKD--SKERPLL 119
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
+ + L +ER + Y+ AD V
Sbjct: 120 --------KRPLDEIKNLFEERRKIYSKADIKV 144
>gi|333982156|ref|YP_004511366.1| shikimate kinase [Methylomonas methanica MC09]
gi|333806197|gb|AEF98866.1| Shikimate kinase [Methylomonas methanica MC09]
Length = 192
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q ++L+G+MG GKTT+G+ L+ AL F DSDK +E M G + IF GEA FR E
Sbjct: 16 QNIYLIGLMGVGKTTIGKQLAKALQRPFYDSDKVIEDSM-GVDIPTIFSYEGEAGFRLRE 74
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARR 203
+Q+L+ +P V+ATGGG+V++P N ++ G V+L+ +D + R
Sbjct: 75 QAVIQQLTAIPGIVMATGGGSVIKPENREALKASGFVVYLHCSIDKILYR 124
>gi|254516136|ref|ZP_05128196.1| shikimate kinase [gamma proteobacterium NOR5-3]
gi|219675858|gb|EED32224.1| shikimate kinase [gamma proteobacterium NOR5-3]
Length = 180
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 4/135 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GKTT+G++L+ L FADSD +E G +A IF GE FR+ E
Sbjct: 17 VFLVGPMGAGKTTIGKLLARGLKLGFADSDSEIETRT-GADIAWIFDVEGEEGFRDREES 75
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
+ +++L+ V+ATGGG V+R N R + +G ++L+ LD RR G + PLL
Sbjct: 76 VIDEMTLLDHTVLATGGGVVMREANRRVLSSRGFVIYLHATLDEQIRRTR--GDRNRPLL 133
Query: 216 DYDSADSYTKAFTAL 230
+ D +S + A+
Sbjct: 134 NGDDPESVLRELFAV 148
>gi|158320657|ref|YP_001513164.1| shikimate kinase [Alkaliphilus oremlandii OhILAs]
gi|229508587|sp|A8MFK5.1|AROK_ALKOO RecName: Full=Shikimate kinase; Short=SK
gi|158140856|gb|ABW19168.1| Shikimate kinase [Alkaliphilus oremlandii OhILAs]
Length = 169
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVG M GKTT+G++L+D LDY F D D ++EK S+++IF+ GEAYFR+ ES+
Sbjct: 5 IVLVGFMAVGKTTLGKLLADQLDYNFIDLDLFIEK-KESMSISEIFRLKGEAYFRQKESE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLN 194
AL LS V Q V+ATGGG V+ N ++Q G ++L
Sbjct: 64 ALDLLSDVEQSVIATGGGTVISEENRSKLKQIGRVIYLE 102
>gi|406894331|gb|EKD39171.1| hypothetical protein ACD_75C00488G0005 [uncultured bacterium]
Length = 171
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L G MGSGKTTVG++L+ L+Y F D+D +E+ G SV +IFK GEA FR+ E++
Sbjct: 6 IILTGFMGSGKTTVGKLLARQLNYLFVDTDHLIEQRC-GMSVQEIFKNKGEATFRQMEAE 64
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
++L V+ATGG ++ PLN + + QG L D + +R+A PLL
Sbjct: 65 IARELGAGEGMVIATGGRLMLDPLNAQVLGAQGSVYCLAAQPDEILQRVARSAQGQRPLL 124
Query: 216 DYDSADSYTKAFTALSALSKERSEAYA 242
D + + L +ER E YA
Sbjct: 125 D------TSNPLERIVDLIREREEGYA 145
>gi|292670452|ref|ZP_06603878.1| shikimate kinase [Selenomonas noxia ATCC 43541]
gi|292647862|gb|EFF65834.1| shikimate kinase [Selenomonas noxia ATCC 43541]
Length = 173
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 86/153 (56%), Gaps = 7/153 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKT++G +L+ L F D D+ +E+ G S+ +F + GE YFR E +
Sbjct: 4 VVLIGFMGTGKTSIGRLLAARLGCAFHDLDRKIEE-QHGMSIPAMFAQHGEPYFRAREKE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A+ + V+ATGGG V P N +R+ GI V L +D + +R AA G P+L
Sbjct: 63 AVHAAASRSNAVIATGGGTVKDPENTAALRKNGILVALTADVDTILQRTAAHG--KRPVL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
DSAD + TA+ L +ER Y +AD TV
Sbjct: 121 --DSADGGDRR-TAVVKLLEERRRLYEDADITV 150
>gi|170757837|ref|YP_001781450.1| shikimate kinase [Clostridium botulinum B1 str. Okra]
gi|429246201|ref|ZP_19209543.1| shikimate kinase [Clostridium botulinum CFSAN001628]
gi|229509262|sp|B1IMQ2.1|AROK_CLOBK RecName: Full=Shikimate kinase; Short=SK
gi|169123049|gb|ACA46885.1| shikimate kinase [Clostridium botulinum B1 str. Okra]
gi|428756805|gb|EKX79335.1| shikimate kinase [Clostridium botulinum CFSAN001628]
Length = 170
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 9/155 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM SGK+T+G LS L Y D+D +E+ M S+ +IFK GE YFRE E
Sbjct: 2 ENIVLIGMPLSGKSTLGRELSKILKYDLIDTDTLIEE-MEDKSIKEIFKIYGEDYFREKE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
+ + KL +V++TGGG + N + G TV+L VPL+ L +R+ D+ P
Sbjct: 61 LEIINKLKKESNKVISTGGGLPIYNKNIYELKNIGFTVYLKVPLEELIKRMVKKEYDTRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + L + K R E Y A +
Sbjct: 121 LLKNNDT-------KFLEEMYKNRIEIYEKAHTII 148
>gi|308177504|ref|YP_003916910.1| shikimate kinase [Arthrobacter arilaitensis Re117]
gi|307744967|emb|CBT75939.1| shikimate kinase [Arthrobacter arilaitensis Re117]
Length = 162
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 92/168 (54%), Gaps = 8/168 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++L+G M SGK+TVG+ L+ AL +FADSD + G ++AQIF E GE +FR+ E +
Sbjct: 2 IYLIGPMASGKSTVGKSLASALSTSFADSDATIVAHHG--TIAQIFAEHGEGHFRDLEVQ 59
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
AL +L VVATGGGAV+R N + + +G ++L + A A RI G PLL
Sbjct: 60 ALCRLR---TGVVATGGGAVLREENQQLLSRGTVIYLELGEAAAAERIK--GDGHRPLLA 114
Query: 217 YDSA-DSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVL 263
D A +S+ + A+ + ++ + D L + +G D L
Sbjct: 115 GDEALNSWIAVYEKRRAIYEMLADVHVIVDGKSVLQIVEEVLGQLDQL 162
>gi|398798235|ref|ZP_10557536.1| shikimate kinase [Pantoea sp. GM01]
gi|398100952|gb|EJL91180.1| shikimate kinase [Pantoea sp. GM01]
Length = 174
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++L+G G GKTTVG+ LS AL Y F D+D ++ +L SVA+I G FR E++
Sbjct: 5 IYLIGARGCGKTTVGQALSQALGYAFNDTDHHL-QLTTQRSVAEIVASEGWESFRARETE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
+L+ ++ P V+ATGGG V+ N RFMR+ G ++LN P D LA+R+
Sbjct: 64 SLRAVT-APNTVIATGGGMVLAEANCRFMREHGQVIWLNAPSDVLAQRL 111
>gi|297183671|gb|ADI19796.1| shikimate kinase [uncultured alpha proteobacterium EB000_37G09]
Length = 207
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 90/155 (58%), Gaps = 10/155 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVG+MG+GKT++G L+ + F DSD +E++ + IF+ GEA+FRE E
Sbjct: 30 KSVVLVGLMGAGKTSLGSKLARHMGRPFIDSDAEIERVTN-VRIRDIFELGGEAHFREIE 88
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
++ ++K+ P +++TGGGA +P ++Q ++V+L+ P + L RI T S P
Sbjct: 89 ARTIEKILDGPPVILSTGGGAFCQPDVRDLIKQKALSVWLDAPPEILLARIG--NTASRP 146
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL D+ L +L+++R+ YA AD T+
Sbjct: 147 LLHGDN------PLKILKSLAEDRNPHYAKADLTL 175
>gi|295690853|ref|YP_003594546.1| shikimate kinase [Caulobacter segnis ATCC 21756]
gi|295432756|gb|ADG11928.1| Shikimate kinase [Caulobacter segnis ATCC 21756]
Length = 201
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 10/166 (6%)
Query: 84 KGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFK 143
+G E + L + + LVG+MG GK++VG L+ AL+ F D+D VE G S+++IF
Sbjct: 16 QGSEDLAPLRQKTIVLVGLMGVGKSSVGRRLATALNLPFRDADNEVEA-AAGRSISEIFA 74
Query: 144 ESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALAR 202
E GEA FR+ E + + +L P V+ATGGGA V + + ++V+L ++ LAR
Sbjct: 75 ELGEAAFRDGERRVIARLLEEPPHVLATGGGAFVNAETRALINEKALSVWLKADVELLAR 134
Query: 203 RIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
R++ D+ PLL L+ L++ R+ AYA A V
Sbjct: 135 RVSR--KDTRPLL------KGKDPVAVLTELARVRNPAYAEAQVHV 172
>gi|289578271|ref|YP_003476898.1| shikimate kinase [Thermoanaerobacter italicus Ab9]
gi|297544551|ref|YP_003676853.1| Shikimate kinase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|289527984|gb|ADD02336.1| Shikimate kinase [Thermoanaerobacter italicus Ab9]
gi|296842326|gb|ADH60842.1| Shikimate kinase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 171
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 92/180 (51%), Gaps = 22/180 (12%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L G M +GKTTVG+ ++ + + F D+DK +EK M +V IF++ GE YFR+ E
Sbjct: 4 IVLTGFMATGKTTVGKKVATTMSFGFTDTDKMIEK-MANMTVLDIFEKYGEEYFRKLEKM 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A++K + + V+ATGGG V+ P N +R+ GI + L + + R I PLL
Sbjct: 63 AVKKAARLKNFVIATGGGVVLNPSNVVQLRKNGIVICLKARPEIIMRNIGK--NKERPLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVL 275
D+ + + L KER Y AD T+ DV D+T +A EV+
Sbjct: 121 MVDNPEE------KIRQLLKEREHFYRFADYTI------------DVSDMTIDEVADEVI 162
>gi|304319750|ref|YP_003853393.1| shikimate kinase [Parvularcula bermudensis HTCC2503]
gi|303298653|gb|ADM08252.1| putative shikimate kinase [Parvularcula bermudensis HTCC2503]
Length = 188
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 10/159 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+G+MG+GKTTVG L++ L F D+D+ +E SVA IF+ GE YFRE E
Sbjct: 15 RPVVLIGLMGAGKTTVGRRLAELLALPFKDADEEIED-AANMSVADIFETYGEGYFREGE 73
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
K +++L V+ATGGGA + ++ + I+++L LD L +R A T P
Sbjct: 74 RKVIERLLSEGPMVLATGGGAFMNAATRELVKLKAISIWLRADLDLLVKRTAQKATR--P 131
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
LL A L+ L KER+ YA AD V L
Sbjct: 132 LLQQGDAREI------LARLLKERAPVYAEADIVVDSLE 164
>gi|332160700|ref|YP_004297277.1| shikimate kinase II [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325664930|gb|ADZ41574.1| shikimate kinase II [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330862479|emb|CBX72636.1| shikimate kinase 2 [Yersinia enterocolitica W22703]
Length = 174
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G+GKTT+G+ L+ AL+Y F D+D ++++ + +SVA+I G FR E
Sbjct: 3 QTIFMVGARGAGKTTIGKALAQALEYRFIDTDLFMQQTL-QSSVAEIVAREGWDGFRLRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIA 205
S ALQ ++ P+ VVATGGGAV+ N FMRQ G+ ++L + LA R+A
Sbjct: 62 SMALQTVT-APKTVVATGGGAVLSHDNRTFMRQHGVVIYLRASANVLAERLA 112
>gi|218259383|ref|ZP_03475133.1| hypothetical protein PRABACTJOHN_00790 [Parabacteroides johnsonii
DSM 18315]
gi|218225175|gb|EEC97825.1| hypothetical protein PRABACTJOHN_00790 [Parabacteroides johnsonii
DSM 18315]
Length = 173
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 82/141 (58%), Gaps = 4/141 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G MG+GKTTVG++LS L +F D D Y+E T V Q+F E GE FR+ E +
Sbjct: 4 IFLIGYMGAGKTTVGKVLSQQLGLSFIDLDHYIEGRYHKT-VGQLFAERGEEAFRDIERR 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L++++ +V+TGGGA N FM + G TV+L V ++ LA+R+ + P+L
Sbjct: 63 MLREVAAFENVLVSTGGGAPCFFDNIEFMNEAGQTVYLKVSVEELAKRLELCKSTR-PIL 121
Query: 216 DYDSADSYTKAFTALSALSKE 236
S D KAF A S +E
Sbjct: 122 KGRSGDE-LKAFIAESLEKRE 141
>gi|406981055|gb|EKE02576.1| Shikimate kinase [uncultured bacterium]
Length = 171
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 10/160 (6%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
+ + L G+MGSGK+TVG +++ L F D+DK +E+ ++ +IF + GEAYFRE
Sbjct: 2 AKNIVLTGLMGSGKSTVGSLIAQKLGKIFVDTDKLIEE-DAQININEIFAQYGEAYFREL 60
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSF 212
E+K ++++S QV++TGGG ++ P N + ++ G +L L RI ++
Sbjct: 61 EAKIIKRVSPNSDQVISTGGGTLINPDNLKNLKDNGALFYLKASAKTLFERIK--NENNR 118
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
PLL + + L L ++R E Y AD ++ N
Sbjct: 119 PLLKNND------PLSTLEKLLEKREEFYNQADFIINTEN 152
>gi|54401374|gb|AAV34468.1| predicted shikimate kinase [uncultured proteobacterium RedeBAC7D11]
Length = 167
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GK+T G LS+ LDY F D+DK +EK G + IF++ GE YFR+ ESK
Sbjct: 3 VFLVGPMGTGKSTTGRNLSEKLDYDFYDTDKLIEK-AEGKKIKDIFEQDGEDYFRQKESK 61
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS--FPL 214
AL + + + V+ATGGG V R N F+ V LD+ R DS PL
Sbjct: 62 ALSETKTLEKAVIATGGGIVEREENRLFLEHEDKVIF---LDSSPERQYKRTKDSKKRPL 118
Query: 215 LD 216
L+
Sbjct: 119 LN 120
>gi|422344658|ref|ZP_16425583.1| shikimate kinase [Selenomonas noxia F0398]
gi|355376727|gb|EHG23969.1| shikimate kinase [Selenomonas noxia F0398]
Length = 173
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 86/153 (56%), Gaps = 7/153 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKT++G +L+ L F D D+ +E+ G S+ +F + GE YFR E +
Sbjct: 4 VVLIGFMGTGKTSIGRLLAARLGCAFHDLDRKIEE-QHGMSIPAMFAQHGEPYFRAREKE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A+ + V+ATGGG V P N +R+ GI V L +D + +R AA GT P+L
Sbjct: 63 AVHAAASRSNAVIATGGGTVKDPENTAALRKNGILVALTADVDTILQRTAAHGTR--PVL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
DSAD + A+ L +ER Y +AD TV
Sbjct: 121 --DSADGGDRR-AAVVKLLEERRRLYEDADITV 150
>gi|330993348|ref|ZP_08317283.1| 3-dehydroquinate synthase [Gluconacetobacter sp. SXCC-1]
gi|329759378|gb|EGG75887.1| 3-dehydroquinate synthase [Gluconacetobacter sp. SXCC-1]
Length = 580
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 86/161 (53%), Gaps = 12/161 (7%)
Query: 89 ASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEA 148
A C G+ + LVG+MG+GKTT+G IL+ L F DSD+ +E+ G S+A +F++ GE
Sbjct: 37 AGC--GRTIVLVGLMGAGKTTIGRILATTLGLPFVDSDEEIER-AAGCSIADLFQKYGEP 93
Query: 149 YFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAV 207
FR E +++L P V+ATGGGA + +R Q ++++L PL L +R+A
Sbjct: 94 EFRRGERLVIRRLLSGPPVVLATGGGAFMDQRTRASVREQAVSIWLRCPLPLLVQRVAE- 152
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
PLL+ S + F + R YA AD V
Sbjct: 153 -RTHRPLLNTASPHAVLADFMRI------RHPVYAEADIIV 186
>gi|386309553|ref|YP_006005609.1| shikimate kinase III [Yersinia enterocolitica subsp. palearctica
Y11]
gi|418241411|ref|ZP_12867940.1| shikimate kinase II [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|433550629|ref|ZP_20506673.1| Shikimate kinase III [Yersinia enterocolitica IP 10393]
gi|318604573|emb|CBY26071.1| shikimate kinase III [Yersinia enterocolitica subsp. palearctica
Y11]
gi|351779212|gb|EHB21330.1| shikimate kinase II [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|431789764|emb|CCO69713.1| Shikimate kinase III [Yersinia enterocolitica IP 10393]
Length = 174
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G+GKTT+G+ L+ AL+Y F D+D ++++ + +SVA+I G FR E
Sbjct: 3 QTIFMVGARGAGKTTIGKALAQALEYRFIDTDLFMQQTL-QSSVAEIVAREGWDGFRLRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIA 205
S ALQ ++ P+ VVATGGGAV+ N FMRQ G+ ++L + LA R+A
Sbjct: 62 SMALQTVT-APKTVVATGGGAVLSHDNRTFMRQHGVVIYLRASANVLAERLA 112
>gi|169344512|ref|ZP_02865481.1| shikimate kinase [Clostridium perfringens C str. JGS1495]
gi|169297432|gb|EDS79541.1| shikimate kinase [Clostridium perfringens C str. JGS1495]
Length = 171
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 6/151 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GM G+GKTT+G LS+ L F D D+++E+ G + ++F + GE FR+ ESK
Sbjct: 6 VLLIGMPGAGKTTIGRDLSNVLKMNFLDMDEFIER-STGKEIKELFSQ-GEEVFRDLESK 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
+ + LS + V+++GGG V R N ++ ITVF+N PLD + + + T+ PLL
Sbjct: 64 SCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLI---MEDIDTEGRPLL- 119
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADAT 247
+D + T + L K+ S+ D T
Sbjct: 120 WDGKERITNLYRDRIDLYKKHSDIEIINDGT 150
>gi|300856077|ref|YP_003781061.1| shikimate kinase [Clostridium ljungdahlii DSM 13528]
gi|300436192|gb|ADK15959.1| shikimate kinase [Clostridium ljungdahlii DSM 13528]
Length = 169
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 16/162 (9%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GM GSGKTT+G +L+ L+ D D Y+E G S+ IFK +GE FR+ ESK
Sbjct: 8 IVLIGMPGSGKTTLGNLLASRLNRKCIDLDDYIES-ENGCSIPDIFK-NGEECFRKLESK 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A++++S+ ++ATGGG + R N +++ GI VF++ PL+ + I+ V PLL
Sbjct: 66 AVEEVSVEKNIIIATGGGVIKRKCNIENLKKNGIVVFIDRPLENI---ISDVDISGRPLL 122
Query: 216 DYDSADSYTKAFTALSALSKERSEAYAN-ADATV-SLLNLAA 255
K + + ER + Y D +V ++LNL A
Sbjct: 123 --------KKGINEIEKIYNERYDIYKEYCDFSVNNILNLEA 156
>gi|253701266|ref|YP_003022455.1| shikimate kinase [Geobacter sp. M21]
gi|251776116|gb|ACT18697.1| Shikimate kinase [Geobacter sp. M21]
Length = 170
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 82/150 (54%), Gaps = 10/150 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG GKT+VG +LS L +TF D D+ + GTS+ +IF GE FR E+
Sbjct: 5 IFLTGFMGCGKTSVGRVLSHRLGWTFVDLDQVIVD-RAGTSIKEIFASQGEPAFRAVEAA 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
AL +++ QVV+TGGGAV+ N MR G V L ++ +A R+ G PLL
Sbjct: 64 ALSEVASRQSQVVSTGGGAVIAAENREAMRGSGCIVNLTASVETIAARV--TGDSERPLL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANAD 245
D+ + +S + + R + YA+AD
Sbjct: 122 AADA------SVERISFMLQGREQFYADAD 145
>gi|149278995|ref|ZP_01885129.1| putative shikimate kinase [Pedobacter sp. BAL39]
gi|149230274|gb|EDM35659.1| putative shikimate kinase [Pedobacter sp. BAL39]
Length = 168
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G MG GK+T+G+ L+ + Y F D D +EK +G T +A F GEA FR ESK
Sbjct: 3 IFLIGFMGCGKSTLGKKLASRMGYEFIDLDHQIEKEIGST-IANYFSAHGEAVFRSQESK 61
Query: 157 ALQKLSLVPQQVVATGGG--AVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPL 214
L++ VVATGGG ++W GI++++ +P LA+R+ + G D PL
Sbjct: 62 TLKEFDYPENCVVATGGGTPCFFDNMDW-INNNGISIYIELPPVVLAQRLES-GKDKRPL 119
Query: 215 LDYDSADSYTKAFTALSALS-KERSEAYANADATVSLLNLAA 255
L D + A A A ERS Y T+S ++L A
Sbjct: 120 L----RDLHGDALVAFIAGKLGERSNYYQQCQFTISGISLTA 157
>gi|440288821|ref|YP_007341586.1| shikimate kinase [Enterobacteriaceae bacterium strain FGI 57]
gi|440048343|gb|AGB79401.1| shikimate kinase [Enterobacteriaceae bacterium strain FGI 57]
Length = 174
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 73/113 (64%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +FL+G G GKTT+G+ L++A ++ F D+D+ +++ G +VA I G A FR E
Sbjct: 3 QPIFLIGARGCGKTTIGQRLTNACNFHFVDTDQVLQQ-RAGMTVADIVVREGWAGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAA 206
++ LQ ++ P VVATGGG ++ +N FMRQ G+ ++LN P+ LA R+ A
Sbjct: 62 TQTLQHVTQ-PGTVVATGGGIILAEVNRDFMRQNGVVIYLNAPVSVLAGRLEA 113
>gi|182624122|ref|ZP_02951909.1| shikimate kinase [Clostridium perfringens D str. JGS1721]
gi|177910738|gb|EDT73098.1| shikimate kinase [Clostridium perfringens D str. JGS1721]
Length = 167
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 84/151 (55%), Gaps = 6/151 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GM GSGKTT+G LS L F D D+++E+ G + ++F + GE FR+ ESK
Sbjct: 6 VLLIGMPGSGKTTIGRELSKVLKMNFLDMDEFIER-STGKEIKELFAQ-GEEVFRDLESK 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
+ + LS + V+++GGG V R N ++ ITVF+N PLD + + + T+ PLL
Sbjct: 64 SCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLI---MEDIDTEGRPLL- 119
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADAT 247
+D + T + L K+ S+ D T
Sbjct: 120 WDGKERLTNLYRDRIDLYKKHSDIEIINDGT 150
>gi|168213890|ref|ZP_02639515.1| shikimate kinase [Clostridium perfringens CPE str. F4969]
gi|170714629|gb|EDT26811.1| shikimate kinase [Clostridium perfringens CPE str. F4969]
Length = 167
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 84/151 (55%), Gaps = 6/151 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GM GSGKTT+G LS L F D D+++E+ G + ++F + GE FR+ ESK
Sbjct: 6 VLLIGMPGSGKTTIGRELSKVLKMNFLDMDEFIER-STGKEIKELFAQ-GEEVFRDLESK 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
+ + LS + V+++GGG V R N ++ ITVF+N PLD + + + T+ PLL
Sbjct: 64 SCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLI---MEDIDTEGRPLL- 119
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADAT 247
+D + T + L K+ S+ D T
Sbjct: 120 WDGKERLTNLYRDRIDLYKKHSDIEIINDGT 150
>gi|390935043|ref|YP_006392548.1| shikimate kinase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570544|gb|AFK86949.1| Shikimate kinase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 171
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L G M +GKT VG+ ++D L ++F D+D +EK+ G + +IF + GE YFR E A+
Sbjct: 6 LTGFMATGKTVVGKRVADILSFSFIDTDDLIEKI-SGMKIPEIFDKYGEKYFRGIEKIAV 64
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLLDY 217
+ S + V++TGGG V+ P N +R+ G+ + L + + R I D P+L
Sbjct: 65 ARASRLKNHVISTGGGVVLNPSNIVQLRKHGVVICLKANPEVILRNIG--DNDKRPIL-- 120
Query: 218 DSADSYTKAFTALSALSKERSEAYANADATVSLLNLA 254
+ D Y K + AL ER Y AD T+ + N++
Sbjct: 121 ATGDVYEK----IKALLAERQHYYEFADYTIDVSNMS 153
>gi|290476272|ref|YP_003469176.1| shikimate kinase [Xenorhabdus bovienii SS-2004]
gi|289175609|emb|CBJ82412.1| shikimate kinase II [Xenorhabdus bovienii SS-2004]
Length = 174
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LF+VG G+GKTT+G++L++AL YTF D+D+ ++ G T +A + ++ G +FRE E
Sbjct: 3 QTLFIVGARGAGKTTIGKLLAEALSYTFIDTDESIQAFCGMT-IADLVEQYGWTHFRELE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIA 205
S+ L+ S + V++TGGG ++ N ++M+Q GI V+L P + L +R++
Sbjct: 62 SQILKNAS-QNKCVISTGGGMILSSENRQYMQQNGIVVYLQAPAEVLIKRLS 112
>gi|326315790|ref|YP_004233462.1| shikimate kinase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323372626|gb|ADX44895.1| Shikimate kinase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 183
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 80/152 (52%), Gaps = 12/152 (7%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+ L+G+ GSGK+TVG L+ L F DSD +E+ +GG S+ F GEA FR+ E
Sbjct: 7 SIHLIGLPGSGKSTVGRHLARRLGLPFIDSDHVIEQRIGG-SIRGFFDREGEAAFRDLEE 65
Query: 156 KALQKLS--LVPQQVVATGGGAVVRPLNW-RFMRQGITVFLNVPLDALARRIAAVGTDSF 212
+ +++L+ V QV+ATGGG VVRP N R +G V+LN + + R I +
Sbjct: 66 EVIRELTGPEVRPQVLATGGGVVVRPGNRARLRERGTVVYLNASPEEIFRHIRH--DQTR 123
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANA 244
PLL DS L L +ER Y A
Sbjct: 124 PLLQVDS------PLDRLRELQRERDPLYREA 149
>gi|168204595|ref|ZP_02630600.1| shikimate kinase [Clostridium perfringens E str. JGS1987]
gi|170663856|gb|EDT16539.1| shikimate kinase [Clostridium perfringens E str. JGS1987]
Length = 167
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 6/151 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GM G+GKTT+G LS L F D D+++E+ G + ++F + GE FR+ ESK
Sbjct: 6 VLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFIER-STGKEIKELFAQ-GEEVFRDLESK 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
+ + LS++ V+++GGG V R N ++ ITVF+N PLD + + + T+ PLL
Sbjct: 64 SCELLSILKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLI---MEDIDTEGRPLL- 119
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADAT 247
+D + T + L K+ S+ D T
Sbjct: 120 WDGKERLTNLYRDRIDLYKKHSDIEIINDGT 150
>gi|28211258|ref|NP_782202.1| shikimate kinase [Clostridium tetani E88]
gi|28203698|gb|AAO36139.1| shikimate kinase [Clostridium tetani E88]
Length = 167
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 102 MMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKL 161
M G+GK+T G+ LS + Y F D+D +EK+ +++ IFKE GE YFR+ E L +
Sbjct: 1 MPGAGKSTFGKELSKIIQYDFIDTDYEIEKI-ERSAIKHIFKEKGENYFRKLERDLLNDI 59
Query: 162 SLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSA 220
++VVATGGG + N + + GIT+FL+VPL+ L +R D+ PLLD ++
Sbjct: 60 IKFDKKVVATGGGLPIFFNNMDILNKNGITIFLDVPLEELLKRNEK--NDNRPLLDKEN- 116
Query: 221 DSYTKAFTALSALSKERSEAYANADATVSLLNLAA 255
+ L + R Y V N++A
Sbjct: 117 -----KYDKLKEIYNSRIHIYNKCKIKVENYNISA 146
>gi|295695369|ref|YP_003588607.1| shikimate kinase [Kyrpidia tusciae DSM 2912]
gi|295410971|gb|ADG05463.1| Shikimate kinase [Kyrpidia tusciae DSM 2912]
Length = 179
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 88/154 (57%), Gaps = 11/154 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L+L+G MGSGK+TVG +L++ + ++FAD+D + + G + +IF + GE++FR+ E
Sbjct: 4 LYLIGFMGSGKSTVGRLLAERIGWSFADTDDEIVRRE-GMEIPEIFAKGGESFFRDLEQA 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSF-PL 214
L +LS V+ATGGG V+R N M+ G TV+L+ + LA R+ VG + PL
Sbjct: 63 TLLELSGRSGWVIATGGGIVLRGRNVEIMKASGKTVYLSAREEVLAARL--VGDPAVRPL 120
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYANADATV 248
L DS L L +ER Y AD T+
Sbjct: 121 LGGDS------RIARLHELLQERRGMYEWADLTI 148
>gi|345892754|ref|ZP_08843568.1| shikimate kinase [Desulfovibrio sp. 6_1_46AFAA]
gi|345046881|gb|EGW50756.1| shikimate kinase [Desulfovibrio sp. 6_1_46AFAA]
Length = 174
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 5/114 (4%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+FLVG +GKTTVG L+ LD F D+D+++ + + G SVA++ G + FR +ES
Sbjct: 3 AIFLVGARAAGKTTVGLELARLLDCAFVDTDRHLRERL-GRSVAEVVSAEGWSGFRAHES 61
Query: 156 KALQKLSLVPQQ---VVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIA 205
L++++ + Q V+ATGGG V+ P N RFMR QG +L P +ALARR+A
Sbjct: 62 AVLREVAALHAQGGAVIATGGGMVLDPENRRFMRAQGTVFYLAAPAEALARRLA 115
>gi|153938735|ref|YP_001391221.1| shikimate kinase [Clostridium botulinum F str. Langeland]
gi|384462240|ref|YP_005674835.1| shikimate kinase [Clostridium botulinum F str. 230613]
gi|238686689|sp|A7GEL1.1|AROK_CLOBL RecName: Full=Shikimate kinase; Short=SK
gi|152934631|gb|ABS40129.1| shikimate kinase [Clostridium botulinum F str. Langeland]
gi|295319257|gb|ADF99634.1| shikimate kinase [Clostridium botulinum F str. 230613]
Length = 170
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 9/155 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM SGK+T+G LS L Y D+D +E+ M S+ +IFK GE YFRE E
Sbjct: 2 ENIVLIGMPLSGKSTLGRELSKILKYDLIDTDTLIEE-MEDKSIKEIFKIYGEDYFREKE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
+ + K +V++TGGG + N + + G TV+L VPL+ L +R+ D+ P
Sbjct: 61 LEIINKFKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + L + K R E Y A +
Sbjct: 121 LLKNNDT-------KFLEEMYKNRIEIYEKAHTII 148
>gi|262037643|ref|ZP_06011088.1| shikimate kinase [Leptotrichia goodfellowii F0264]
gi|261748323|gb|EEY35717.1| shikimate kinase [Leptotrichia goodfellowii F0264]
Length = 172
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 71/109 (65%), Gaps = 2/109 (1%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM SGKTTVG++L+ ++Y D+D+Y+EK +++IF E GE YFR E
Sbjct: 2 KNIILIGMPASGKTTVGKLLAKKINYEHYDADRYLEK-NEEKRISEIFSEKGEEYFRNLE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALAR 202
K L++LS +++TGGGAV R N +++ GI VFL+ +D +A+
Sbjct: 61 EKYLKELSEKNGVIISTGGGAVKRKENMEELKKNGIIVFLSRKVDDIAK 109
>gi|311280725|ref|YP_003942956.1| shikimate kinase [Enterobacter cloacae SCF1]
gi|308749920|gb|ADO49672.1| Shikimate kinase [Enterobacter cloacae SCF1]
Length = 184
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 3/118 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +FL+G G GKTT+G LS+A Y F D+D+ +++ +VA I G + FR E
Sbjct: 3 QPIFLIGARGCGKTTIGRRLSEACQYQFIDTDQILQQ-RAQMTVADIVANEGWSGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS 211
++ LQ ++ Q V+ATGGG ++ P+N FMRQ G+ ++L P+ LA R+ A +S
Sbjct: 62 TQTLQTVTAA-QHVIATGGGIILAPVNREFMRQNGVVIYLKAPVSVLAGRLEAFPEES 118
>gi|339021375|ref|ZP_08645455.1| shikimate kinase [Acetobacter tropicalis NBRC 101654]
gi|338751539|dbj|GAA08759.1| shikimate kinase [Acetobacter tropicalis NBRC 101654]
Length = 588
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G+ + LVG+MG+GKTT+G L+ L F D+D +E+ G S+A +F+ GEA FR+
Sbjct: 48 GRSIVLVGLMGAGKTTIGRRLATRLGLPFVDADIEIER-AAGCSIADVFRLYGEAAFRDG 106
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSF 212
E + +++L P V+ATGGGA + +R+ I+++L PL L RR+ G +
Sbjct: 107 ERRVIRRLLEGPPMVLATGGGAYMDASTRSLVRERAISIWLRCPLPVLLRRVQ--GRNHR 164
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
PLL+ L+ L R YA AD V
Sbjct: 165 PLLN------EAPPRDVLARLMTVRHPIYAEADIIV 194
>gi|257063396|ref|YP_003143068.1| shikimate kinase [Slackia heliotrinireducens DSM 20476]
gi|256791049|gb|ACV21719.1| shikimate kinase [Slackia heliotrinireducens DSM 20476]
Length = 188
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 76/123 (61%), Gaps = 9/123 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G MG+GKT+V + L++ L D+D+Y+E LM +A IF E GE YFR+ E++
Sbjct: 18 VFLIGFMGAGKTSVAQYLANVLGLASIDADEYLE-LMEDRVIADIFAEDGEDYFRDIETR 76
Query: 157 ALQKLS---LVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSF 212
L++L+ LV +++ATGGG + RP N M G TV+L V D A RI T+S
Sbjct: 77 HLEELAKRKLV--RLIATGGGVIKRPANIEIMHSYGYTVYLGVTADEAAERIP--NTESR 132
Query: 213 PLL 215
PL
Sbjct: 133 PLF 135
>gi|226500818|ref|NP_001150361.1| shikimate kinase family protein [Zea mays]
gi|195638646|gb|ACG38791.1| shikimate kinase family protein [Zea mays]
gi|414868512|tpg|DAA47069.1| TPA: shikimate kinase family protein [Zea mays]
Length = 273
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 106/190 (55%), Gaps = 6/190 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+++VG + K + ++L++++ Y + S++ +E ++GG + FKES E + E E++
Sbjct: 79 IYIVGTDCTAKRNIAKLLANSIIYRYLSSEELLEDVLGGKDALRAFKESDEKGYLEVETE 138
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALAR-RIAAVGTDSFPLL 215
L++L+ + V+ G GAV+ N +R G++++++VPL+ A + + GT +
Sbjct: 139 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLEMAANDMLKSTGTQA---- 194
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVL 275
DS+++A + L E E Y +D TVS+ N+A+ G + +T + +E++
Sbjct: 195 -TTDPDSFSQAMSKLRQRYDELKERYGVSDITVSVQNVASQRGYSSIDLVTLEDMVLEIV 253
Query: 276 VQAQKYLNSK 285
Q +K + +K
Sbjct: 254 RQIEKLIRAK 263
>gi|423118894|ref|ZP_17106578.1| hypothetical protein HMPREF9690_00900 [Klebsiella oxytoca 10-5246]
gi|376399540|gb|EHT12154.1| hypothetical protein HMPREF9690_00900 [Klebsiella oxytoca 10-5246]
Length = 185
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 75/121 (61%), Gaps = 4/121 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G G GKTT+G L+ A Y F D+D +++ T VA I ++ G A FRE ES+
Sbjct: 5 IFLIGPRGCGKTTIGHALARARHYQFTDTDHALQEREQRT-VATIVEQEGWARFRELESE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVG-TDSFPL 214
AL K + P+ VVATGGG ++ N +FMR+ G+ ++L VP+ AL R+ A T+ P
Sbjct: 64 AL-KAAARPETVVATGGGIILAEANRQFMRENGVVIYLQVPVSALIERLEAYPKTEQRPT 122
Query: 215 L 215
L
Sbjct: 123 L 123
>gi|395781449|ref|ZP_10461867.1| shikimate kinase [Bartonella rattimassiliensis 15908]
gi|395420882|gb|EJF87140.1| shikimate kinase [Bartonella rattimassiliensis 15908]
Length = 196
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 26/204 (12%)
Query: 86 REVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKES 145
R++ S +D Q L VG+MG+GK+ +G+ +++ L F DSD+ +EK S+ +IF+
Sbjct: 16 RQILSSIDNQALVFVGLMGAGKSVIGKRIANMLGLPFYDSDQEIEK-AAQMSIKEIFQIY 74
Query: 146 GEAYFREYESKALQKLSLVPQQ--VVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALAR 202
GEA FR E + + L+L+ ++ V+ATGGGA + + + Q GI+++L V LD L +
Sbjct: 75 GEAEFRILEQRII--LNLIKKRPLVLATGGGAYMNQDTRQAIHQNGISIWLKVDLDILMQ 132
Query: 203 RIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDV 262
R++ T PLL + + L ++R YA A+ T++ K+
Sbjct: 133 RVSKRPTR--PLLQTANPKE------TMQKLMEQRYPIYAKANLTIN--------SYKE- 175
Query: 263 LDITPTTIAMEVLVQAQKYLNSKR 286
+P ++A V+ Q YL++++
Sbjct: 176 ---SPYSLAKNVIRSLQHYLHTEK 196
>gi|312793894|ref|YP_004026817.1| shikimate kinase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312181034|gb|ADQ41204.1| Shikimate kinase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 172
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 10/156 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L G MGSGKTT+G+++++ LD D+D V K G T + +IF+ GE FRE E
Sbjct: 2 KNIVLTGFMGSGKTTIGKLIAEKLDIELIDTDSEVIKEFGMT-IDKIFEVHGEKKFREVE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+K ++++S + V++TGGG V+ P N + +R+ G+ FL +++ +R+ D+ P
Sbjct: 61 TKVIERVSKLENVVISTGGGVVLNPENVKLLRENGVIYFLYASAESILKRLK--DDDTRP 118
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL S D + L+ R Y N D ++
Sbjct: 119 LL--KSGDKLSNIIKLLNM----RMPFYKNCDFEIN 148
>gi|255655854|ref|ZP_05401263.1| shikimate kinase [Clostridium difficile QCD-23m63]
gi|296450865|ref|ZP_06892615.1| shikimate kinase [Clostridium difficile NAP08]
gi|296879132|ref|ZP_06903127.1| shikimate kinase [Clostridium difficile NAP07]
gi|296260336|gb|EFH07181.1| shikimate kinase [Clostridium difficile NAP08]
gi|296429675|gb|EFH15527.1| shikimate kinase [Clostridium difficile NAP07]
Length = 177
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+GM GSGKTT+G++L+ + +F D D Y+ K+ S+A++F E GE FR YE++
Sbjct: 9 LILIGMPGSGKTTIGKLLAREYNCSFCDMDDYIVKI-AQKSIAELFSE-GEDIFRNYETQ 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A ++LS+ + V++TGGG + + +N +++ GI +F++ P+ + + + +S PLL
Sbjct: 67 ACRELSISNKAVISTGGGVIKKDVNMEILKETGIIIFIDRPIQKI---LEDININSRPLL 123
>gi|385851907|ref|YP_005898422.1| shikimate kinase [Neisseria meningitidis M04-240196]
gi|421559782|ref|ZP_16005650.1| shikimate kinase [Neisseria meningitidis 92045]
gi|421561832|ref|ZP_16007669.1| shikimate kinase family protein [Neisseria meningitidis NM2657]
gi|421568301|ref|ZP_16014027.1| shikimate kinase [Neisseria meningitidis NM3001]
gi|433522547|ref|ZP_20479230.1| shikimate kinase family protein [Neisseria meningitidis 61103]
gi|254670034|emb|CBA04828.1| shikimate kinase I [Neisseria meningitidis alpha153]
gi|325206730|gb|ADZ02183.1| shikimate kinase [Neisseria meningitidis M04-240196]
gi|402334548|gb|EJU69832.1| shikimate kinase [Neisseria meningitidis 92045]
gi|402336217|gb|EJU71478.1| shikimate kinase family protein [Neisseria meningitidis NM2657]
gi|402342029|gb|EJU77200.1| shikimate kinase [Neisseria meningitidis NM3001]
gi|432257736|gb|ELL13030.1| shikimate kinase family protein [Neisseria meningitidis 61103]
Length = 170
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+G+MG+GKTT+G ++ LDY F DSD + + G + IF+ GE FR E+
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEI-AVAAGVPIPTIFEMEGEQGFRSRETA 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+KL ++P V++TGGGAV++ N +R+ G V+L+ P + L R +S PLL
Sbjct: 67 ILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLL 124
Query: 216 DYDSADSYTKAFTALSALSKERSEAY-ANADATVSLLN 252
AD K L L R Y AD TV N
Sbjct: 125 QV--ADPLAK----LRELYAARDPVYRQTADFTVESAN 156
>gi|451942712|ref|YP_007463349.1| shikimate kinase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
gi|451902099|gb|AGF76561.1| shikimate kinase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
Length = 210
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 12/166 (7%)
Query: 86 REVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKES 145
+++ LD + L LVG+MG+GKT +G+ ++ LD F DSD+ +EK ++ ++FK
Sbjct: 16 KQLLCSLDKRALVLVGLMGAGKTVIGQRIATMLDLPFYDSDQEIEK-AAQMTITELFKIY 74
Query: 146 GEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWR--FMRQGITVFLNVPLDALARR 203
GEA FR E + + L V+ATGGGA + N R + GI+++L V LD L +R
Sbjct: 75 GEAEFRALEQRVVLNLIKKSPLVLATGGGAYMNE-NIRKAIHQNGISIWLKVDLDILMKR 133
Query: 204 IAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
+ T PLL + + L K+R+ YA A+ T++
Sbjct: 134 VLRRPTR--PLLQTANPKE------TMQKLIKQRNPIYAKANLTIN 171
>gi|99081272|ref|YP_613426.1| shikimate kinase [Ruegeria sp. TM1040]
gi|99037552|gb|ABF64164.1| shikimate kinase [Ruegeria sp. TM1040]
Length = 196
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVGMMG+GKT VG L+ LD F DSD +E S+ +IF GE +FRE E
Sbjct: 22 KTIVLVGMMGAGKTAVGRALAARLDVPFLDSDHEIES-AANMSIPEIFARDGEPFFREKE 80
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+ + +L V++TGGGA + N + + G++V L LD L +R+ G D+ P
Sbjct: 81 HQVIARLLKEECGVLSTGGGAFLAERNRTMISEIGVSVCLQADLDVLWKRVK--GRDTRP 138
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL SAD Y LS L R YA AD V
Sbjct: 139 LL--RSADPY----QTLSDLYHARVPTYAMADLKV 167
>gi|254477061|ref|ZP_05090447.1| shikimate kinase [Ruegeria sp. R11]
gi|214031304|gb|EEB72139.1| shikimate kinase [Ruegeria sp. R11]
Length = 196
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 91/173 (52%), Gaps = 22/173 (12%)
Query: 77 GKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGT 136
G+W LK + + +VGMMG+GKT VG L+ LD F DSD +E +
Sbjct: 16 GQWRLK------------KTIVMVGMMGAGKTAVGRGLAARLDVPFLDSDHEIE-VAANR 62
Query: 137 SVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNV 195
++ +IF GE +FR+ E + + +L + V++TGGGA + N R + +G++V+L
Sbjct: 63 TIPEIFARDGEPFFRQKERQVISRLLEEERGVLSTGGGAFLAEENRRTISEKGVSVWLKA 122
Query: 196 PLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LD L R+ D+ PLL +AD + LSA+ ER YA AD V
Sbjct: 123 DLDVLWNRVKH--RDTRPLL--RTADPH----ATLSAIYAERVPFYAQADLAV 167
>gi|120609696|ref|YP_969374.1| shikimate kinase [Acidovorax citrulli AAC00-1]
gi|166219233|sp|A1TKW2.1|AROK_ACIAC RecName: Full=Shikimate kinase; Short=SK
gi|120588160|gb|ABM31600.1| shikimate kinase [Acidovorax citrulli AAC00-1]
Length = 183
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+ L+G+ GSGK+TVG L+ L F DSD +E+ +GG S+ F GEA FR+ E
Sbjct: 7 SIHLIGLPGSGKSTVGRHLARRLGLPFIDSDHVIEQRIGG-SIRGFFDREGEAAFRDLEE 65
Query: 156 KALQKLSL--VPQQVVATGGGAVVRPLNW-RFMRQGITVFLNVPLDALARRIAAVGTDSF 212
+ + +L+ VP QV+ATGGG V+RP N R +G V+LN + + R I +
Sbjct: 66 EVILELTEANVPPQVLATGGGVVIRPGNRTRLRERGTVVYLNASPEEIFRHIRH--DQTR 123
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANA 244
PLL S L L +ER Y A
Sbjct: 124 PLLQVGS------PLDRLRELQRERDPLYREA 149
>gi|385324764|ref|YP_005879203.1| shikimate kinase [Neisseria meningitidis 8013]
gi|416174165|ref|ZP_11609126.1| shikimate kinase [Neisseria meningitidis OX99.30304]
gi|418288948|ref|ZP_12901356.1| shikimate kinase [Neisseria meningitidis NM233]
gi|418291207|ref|ZP_12903247.1| shikimate kinase [Neisseria meningitidis NM220]
gi|421543054|ref|ZP_15989154.1| shikimate kinase [Neisseria meningitidis NM255]
gi|433465796|ref|ZP_20423267.1| shikimate kinase family protein [Neisseria meningitidis NM422]
gi|433491169|ref|ZP_20448282.1| shikimate kinase family protein [Neisseria meningitidis NM418]
gi|254673577|emb|CBA09071.1| shikimate kinase I [Neisseria meningitidis alpha275]
gi|261393151|emb|CAX50763.1| shikimate kinase (SK) [Neisseria meningitidis 8013]
gi|325129553|gb|EGC52377.1| shikimate kinase [Neisseria meningitidis OX99.30304]
gi|372200258|gb|EHP14363.1| shikimate kinase [Neisseria meningitidis NM220]
gi|372200665|gb|EHP14707.1| shikimate kinase [Neisseria meningitidis NM233]
gi|402315816|gb|EJU51372.1| shikimate kinase [Neisseria meningitidis NM255]
gi|432200892|gb|ELK56980.1| shikimate kinase family protein [Neisseria meningitidis NM422]
gi|432225728|gb|ELK81468.1| shikimate kinase family protein [Neisseria meningitidis NM418]
Length = 170
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+G+MG+GKTT+G ++ LDY F DSD + + G + IF+ GE FR E+
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEI-AVAAGVPIPTIFEMEGEQGFRSRETA 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+KL ++P V++TGGGAV++ N +R+ G V+L+ P + L R +S PLL
Sbjct: 67 ILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLL 124
Query: 216 DYDSADSYTKAFTALSALSKERSEAY-ANADATVSLLN 252
AD K L L R Y AD TV N
Sbjct: 125 QV--ADPLAK----LRELYAARDPVYRQTADFTVESAN 156
>gi|238764517|ref|ZP_04625464.1| Shikimate kinase 2 [Yersinia kristensenii ATCC 33638]
gi|238697219|gb|EEP89989.1| Shikimate kinase 2 [Yersinia kristensenii ATCC 33638]
Length = 174
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +FLVG G+GKTT+G+ LS AL Y F D+D ++++ + +SVA+I G FR E
Sbjct: 3 QTIFLVGARGAGKTTIGKALSQALGYRFIDTDLFMQQTL-QSSVAEIVAREGWDGFRLRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIA 205
S ALQ ++ P+ VVATGGGAV+ N FMRQ G+ ++L + LA R+A
Sbjct: 62 SIALQTVT-APKTVVATGGGAVLSLDNRTFMRQHGVVLYLRASANVLAERLA 112
>gi|88705190|ref|ZP_01102901.1| Shikimate kinase [Congregibacter litoralis KT71]
gi|88700280|gb|EAQ97388.1| Shikimate kinase [Congregibacter litoralis KT71]
Length = 170
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 85/153 (55%), Gaps = 5/153 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GKTT+G++L+ L FADSD +E G +A IF GE FR E
Sbjct: 7 VFLVGPMGAGKTTIGKLLARGLKLGFADSDSEIESRT-GADIAWIFDVEGEEGFRNREES 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
+ +++L+ V+ATGGG V+R N R + +G ++L+ LD RR G S PLL
Sbjct: 66 VIDEMTLLDHTVLATGGGVVMRNANRRVLASRGFVIYLHATLDEQIRRTR--GDRSRPLL 123
Query: 216 DYDSADSYTKAFTAL-SALSKERSEAYANADAT 247
+ ++ + AL L +E ++ + D++
Sbjct: 124 NGKDPEATLRELFALRDPLYREIADHVIDTDSS 156
>gi|350427544|ref|XP_003494796.1| PREDICTED: shikimate kinase 2-like [Bombus impatiens]
Length = 173
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 8/147 (5%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
LFLVG +GKTT+G +L+ L Y+F D+D Y++++ S+AQ+ + G FR ES
Sbjct: 6 TLFLVGARAAGKTTLGRLLAQQLGYSFIDTDAYLQQI-AHASIAQLVETEGWDNFRIRES 64
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPL 214
K LQ+++ P++V+ATGGG V+ N +M+Q G FL+VPL LA R+ P
Sbjct: 65 KVLQEIT-KPKRVIATGGGIVLAQQNRIWMQQHGTVFFLSVPLSQLAARLM-----RDPN 118
Query: 215 LDYDSADSYTKAFTALSALSKERSEAY 241
LD + + L + +ER Y
Sbjct: 119 LDQRPSLTGQSIIEELEKIHEERQPLY 145
>gi|154252170|ref|YP_001412994.1| shikimate kinase [Parvibaculum lavamentivorans DS-1]
gi|154156120|gb|ABS63337.1| Shikimate kinase [Parvibaculum lavamentivorans DS-1]
Length = 208
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVG+MG+GKTTVG L+ LD F D+D +E+ G T + +IF+ GE FR E
Sbjct: 27 RSIVLVGLMGAGKTTVGRRLARRLDLAFVDADAEIEQAAGET-IPEIFERHGEPAFRAGE 85
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNW-RFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
+ + +L QV+ATGGGA + P+ +GI+++L LD L +R+ G P
Sbjct: 86 RRVIARLLGAAPQVLATGGGAFMDPVTRANVAARGISIWLKADLDVLVKRVGKRG--DRP 143
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
LL + K L ER YA AD + L
Sbjct: 144 LLQTGDTRATMK------RLMDERYPVYAEADIIIESLE 176
>gi|410943065|ref|ZP_11374806.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Gluconobacter frateurii NBRC 101659]
Length = 560
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 10/153 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVGMMG+GKTTVG L+ F D+D +E+ G ++ +IF GEAYFR E +
Sbjct: 23 VVLVGMMGAGKTTVGRRLAQVYGLPFIDADAEIER-AAGCTIPEIFARHGEAYFRAGERR 81
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+Q+L P ++ATGGGA + + +R+ ++V+L P+ L RR+ G PLL
Sbjct: 82 VIQRLIKGPPCILATGGGAWMDAQTRQLVRKHAVSVWLRAPVHVLLRRVH--GRGGRPLL 139
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
S + ++ L R YA AD +
Sbjct: 140 AQGSPEDI------MTRLVGARYPVYAEADIII 166
>gi|18309683|ref|NP_561617.1| shikimate kinase [Clostridium perfringens str. 13]
gi|18144360|dbj|BAB80407.1| shikimate kinase [Clostridium perfringens str. 13]
Length = 171
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 6/151 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GM G+GKTT+G LS L F D D+++E+ G + ++F + GE FR+ ESK
Sbjct: 6 VLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFIER-STGKEIKELFAQ-GEEVFRDLESK 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
+ + LS + V+++GGG V R N ++ ITVF+N PLD + + + T+ PLL
Sbjct: 64 SCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLI---MEDIDTEGRPLL- 119
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADAT 247
+D + T + L K+ S+ D T
Sbjct: 120 WDGKERLTNLYRDRIDLYKKHSDIEIINDGT 150
>gi|15894185|ref|NP_347534.1| shikimate kinase [Clostridium acetobutylicum ATCC 824]
gi|337736115|ref|YP_004635562.1| shikimate kinase [Clostridium acetobutylicum DSM 1731]
gi|384457624|ref|YP_005670044.1| shikimate kinase [Clostridium acetobutylicum EA 2018]
gi|15023796|gb|AAK78874.1|AE007605_7 Shikimate kinase [Clostridium acetobutylicum ATCC 824]
gi|325508313|gb|ADZ19949.1| Shikimate kinase [Clostridium acetobutylicum EA 2018]
gi|336292150|gb|AEI33284.1| shikimate kinase [Clostridium acetobutylicum DSM 1731]
Length = 165
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 14/148 (9%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+GM G GK+T+G+ILS L+ F D+DKY+E ++ +FK GE +FR ES
Sbjct: 3 LVLIGMPGCGKSTIGKILSKELNMKFYDADKYLED-RNNMKISDMFK-RGEEFFRNLESA 60
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
AL++LS V+ATGGGAV R N + ++G VF+N P + + + V ++ PLL
Sbjct: 61 ALKELSFEENSVIATGGGAVTREKNILCLKKKGKIVFINRPPEKI---MEDVDIENRPLL 117
Query: 216 DYDSADSYTKAFTALSALSKERSEAYAN 243
++ + + L +ER + Y N
Sbjct: 118 EHGK--------SRILKLYEERYKLYIN 137
>gi|398793577|ref|ZP_10553870.1| shikimate kinase [Pantoea sp. YR343]
gi|398210362|gb|EJM97011.1| shikimate kinase [Pantoea sp. YR343]
Length = 174
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++L+G G GKTTVG+ LS AL Y F D+D Y+ +L SVA+I G FR E++
Sbjct: 5 IYLIGARGCGKTTVGKALSQALGYAFNDTDHYL-QLTTQRSVAEIVASEGWDSFRARETE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
+L+ ++ P V+ATGGG V+ +N RFMR+ G ++LN P + LA R+
Sbjct: 64 SLRAVT-APNTVIATGGGMVLAEVNCRFMREHGQVIWLNAPSEVLADRL 111
>gi|349699505|ref|ZP_08901134.1| shikimate kinase / 3-dehydroquinate synthase [Gluconacetobacter
europaeus LMG 18494]
Length = 577
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 96/189 (50%), Gaps = 13/189 (6%)
Query: 61 SNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDY 120
+ H + + LD + A R+ S G+ + LVG+MG+GKTT+G IL+ L
Sbjct: 7 PDRHAPAASSLAIPLDLNAVGPATPRQPGS---GRTIVLVGLMGAGKTTIGRILAARLGV 63
Query: 121 TFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPL 180
F DSD+ +E+ G ++A +F++ GE FR E +++L P V+ATGGGA +
Sbjct: 64 PFVDSDEEIER-AAGYTIADLFQKYGEPEFRRGERLVIRRLLSGPPVVLATGGGAFMDSR 122
Query: 181 NWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSE 239
+R+ I+++L PL L +R+A PLL+ T L+ L + R
Sbjct: 123 TRAGVREHAISIWLRCPLPVLVQRVA--DRTHRPLLN------ATSPHAVLANLMQLRHP 174
Query: 240 AYANADATV 248
YA AD V
Sbjct: 175 VYAEADIIV 183
>gi|387130722|ref|YP_006293612.1| shikimate kinase [Methylophaga sp. JAM7]
gi|386272011|gb|AFJ02925.1| Shikimate kinase I [Methylophaga sp. JAM7]
Length = 177
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 76/120 (63%), Gaps = 4/120 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
LFLVG MG+GK+T+G L+ L TF DSD+ +E+ G S++ IF+ GEA FRE E K
Sbjct: 6 LFLVGPMGAGKSTIGRHLAKRLRRTFLDSDREIEQRTG-VSISWIFEMEGEAGFREREQK 64
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
++ L+ + V+ATGGGAV+ +N +++ +G ++L + L RR+A S PLL
Sbjct: 65 MIEALTEMDNIVLATGGGAVLAEMNRQYLSERGTVIYLAASAEQLFRRMAR--DKSRPLL 122
>gi|254293150|ref|YP_003059173.1| shikimate kinase [Hirschia baltica ATCC 49814]
gi|254041681|gb|ACT58476.1| Shikimate kinase [Hirschia baltica ATCC 49814]
Length = 191
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 87/159 (54%), Gaps = 10/159 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q + LVG+MG+GK++VG L+ L F DSD VEK ++ +IF + GE FR E
Sbjct: 26 QTIVLVGIMGAGKSSVGRRLAQELKIPFFDSDDEVEK-AASMTIPEIFSKHGEEEFRRVE 84
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
++ +++L P+ ++ATGGGA + M++ ITV+LN L+ L RR++ G P
Sbjct: 85 ARVIERLLEEPRMILATGGGAFMNEATREIMQKNAITVWLNADLETLWRRVSKKG--GRP 142
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
LL ++ L+ L R YA AD V+ ++
Sbjct: 143 LLKKENPKQ------VLADLLTLRKPIYALADYEVASID 175
>gi|73748306|ref|YP_307545.1| shikimate kinase [Dehalococcoides sp. CBDB1]
gi|147669086|ref|YP_001213904.1| shikimate kinase [Dehalococcoides sp. BAV1]
gi|289432355|ref|YP_003462228.1| shikimate kinase [Dehalococcoides sp. GT]
gi|452203312|ref|YP_007483445.1| shikimate kinase [Dehalococcoides mccartyi DCMB5]
gi|452204748|ref|YP_007484877.1| shikimate kinase [Dehalococcoides mccartyi BTF08]
gi|115312147|sp|Q3ZZK9.1|AROK_DEHSC RecName: Full=Shikimate kinase; Short=SK
gi|189046329|sp|A5FRZ4.1|AROK_DEHSB RecName: Full=Shikimate kinase; Short=SK
gi|73660022|emb|CAI82629.1| shikimate kinase [Dehalococcoides sp. CBDB1]
gi|146270034|gb|ABQ17026.1| shikimate kinase [Dehalococcoides sp. BAV1]
gi|288946075|gb|ADC73772.1| Shikimate kinase [Dehalococcoides sp. GT]
gi|452110371|gb|AGG06103.1| shikimate kinase [Dehalococcoides mccartyi DCMB5]
gi|452111804|gb|AGG07535.1| shikimate kinase [Dehalococcoides mccartyi BTF08]
Length = 176
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 13/169 (7%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+G MG+GK+++ ++LS+ L +D +E G S++ IFKE+GE YFR+ ESK L
Sbjct: 9 LIGFMGAGKSSISKLLSEKLGKPLVSTDACIET-REGLSISHIFKENGEDYFRQMESKVL 67
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLLDY 217
+ + P Q++ GGG V RP N MR + V+L + L R+ + PL +
Sbjct: 68 EDICQNPNQIIDCGGGIVTRPHNLSIMRLNCLVVYLESRPEDLENRLK--NHTNRPLFNA 125
Query: 218 DSADSYTKAFTALSALSKERSEAYANADATVSLLNLAA---CIGLKDVL 263
+ +D K + L ++ AD TVS N + C ++D L
Sbjct: 126 ERSDKMLKLLESRLPLYRDA------ADITVSTHNKSCHEVCEEIEDSL 168
>gi|414165021|ref|ZP_11421268.1| shikimate kinase [Afipia felis ATCC 53690]
gi|410882801|gb|EKS30641.1| shikimate kinase [Afipia felis ATCC 53690]
Length = 205
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
++ S L + + LVGMMGSGK+TVG L+ L F D+D +E GG ++ +IF G
Sbjct: 17 DIVSALGARTIVLVGMMGSGKSTVGRRLAARLRLPFVDADHEIETRHGGMTITEIFATHG 76
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRP-LNWRFMRQGITVFLNVPLDALARRI 204
E YFRE E+K + L QV+ATGGGAV+R R + ++++L + RR+
Sbjct: 77 EPYFREGEAKVISALLDGGAQVLATGGGAVLREDTRTRIHDKAVSIWLKADGATVLRRV 135
>gi|312135449|ref|YP_004002787.1| shikimate kinase [Caldicellulosiruptor owensensis OL]
gi|311775500|gb|ADQ04987.1| Shikimate kinase [Caldicellulosiruptor owensensis OL]
Length = 172
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 87/156 (55%), Gaps = 10/156 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L G MGSGKTT+G+++++ LD D+D V K +G T + +IF+ GE FRE E
Sbjct: 2 KNIVLTGFMGSGKTTIGKLIAEKLDIELVDTDSEVIKELGMT-IDKIFEVHGEKKFREVE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+K ++++S V++TGGG V+ P N + +R+ G+ FL +++ +R+ D+ P
Sbjct: 61 TKVIERISKYENVVISTGGGVVLNPENVKLLRENGVIYFLYASAESILKRLK--DDDTRP 118
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL + D + L+ R Y N D ++
Sbjct: 119 LL--KNGDKLSNIIRLLNM----RMPFYKNCDFEIN 148
>gi|168209924|ref|ZP_02635549.1| shikimate kinase [Clostridium perfringens B str. ATCC 3626]
gi|170712023|gb|EDT24205.1| shikimate kinase [Clostridium perfringens B str. ATCC 3626]
Length = 167
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 6/151 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GM G+GKTT+G LS L F D D+++E+ G + ++F + GE FR+ ESK
Sbjct: 6 VLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFIER-STGKEIKELFAQ-GEEVFRDLESK 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
+ + LS + V+++GGG V R N ++ ITVF+N PLD + + + T+ PLL
Sbjct: 64 SCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLI---MEDIDTEGRPLL- 119
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADAT 247
+D + T + L K+ S+ D T
Sbjct: 120 WDGKERLTNLYRDRIDLYKKHSDIEIINDGT 150
>gi|386829469|ref|ZP_10116576.1| shikimate kinase [Beggiatoa alba B18LD]
gi|386430353|gb|EIJ44181.1| shikimate kinase [Beggiatoa alba B18LD]
Length = 179
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 79/121 (65%), Gaps = 4/121 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG+MG GKTT+G L+ ALD F DSDK +E+ G SV+ IF+ GEA FR+ E+
Sbjct: 11 IFLVGLMGVGKTTIGRQLATALDVPFKDSDKEIEERTGA-SVSLIFEVEGEAGFRKRETA 69
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
+ +L+ V+ATGGGA++ N + ++ +G+ V+L+ +D L RR + + + PLL
Sbjct: 70 MIAELTAQKGIVLATGGGAILSEENRKCLQDRGLVVYLHASVDELFRRTSH--SRNRPLL 127
Query: 216 D 216
+
Sbjct: 128 E 128
>gi|452944227|ref|YP_007500392.1| shikimate kinase [Hydrogenobaculum sp. HO]
gi|452882645|gb|AGG15349.1| shikimate kinase [Hydrogenobaculum sp. HO]
Length = 162
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 91/184 (49%), Gaps = 34/184 (18%)
Query: 103 MGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLS 162
M SGKT+VG ILS L++TF D D +E + T + +IF E GE++FR++E K L+ +S
Sbjct: 1 MCSGKTSVGNILSSRLNFTFIDVDNEIENRLNMT-IEEIFSEKGESFFRDFEIKTLKDVS 59
Query: 163 LVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLLDYDSAD 221
P+ V++TGGG FM+Q G VFL+VP + R + PLL
Sbjct: 60 -KPKSVISTGGGLGANKEAMEFMKQKGFVVFLDVPFEEFYNRCKDLPNR--PLL------ 110
Query: 222 SYTKAFTALSALSKERSEAYANA----DATVSLLNLAACIGLKDVLDITPTTIAMEVLVQ 277
K+ L +L R + Y+ A DAT S P TIA +++
Sbjct: 111 --RKSLEELRSLHNRRYDVYSMAHQRFDATKS-----------------PETIAEDIIKH 151
Query: 278 AQKY 281
+++
Sbjct: 152 YEQF 155
>gi|254430567|ref|ZP_05044270.1| shikimate kinase [Cyanobium sp. PCC 7001]
gi|197625020|gb|EDY37579.1| shikimate kinase [Cyanobium sp. PCC 7001]
Length = 191
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 110 VGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVV 169
+G L+DAL Y F D+D +E+ G +A+IF E GEA FRE E+ L+++S VV
Sbjct: 1 MGAPLADALGYRFVDADTVLEQ-AAGRGIAEIFAEDGEAGFRELETAVLEQISSWHSLVV 59
Query: 170 ATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSA 220
ATGGG V RP NW + QG+ V+L+ P + L R+ T L D D +
Sbjct: 60 ATGGGVVTRPRNWGHLHQGVVVWLDAPAELLLNRLRQDPTPRPLLADPDPS 110
>gi|423342310|ref|ZP_17320024.1| shikimate kinase [Parabacteroides johnsonii CL02T12C29]
gi|409218224|gb|EKN11196.1| shikimate kinase [Parabacteroides johnsonii CL02T12C29]
Length = 173
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 82/141 (58%), Gaps = 4/141 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G MG+GKTTVG++LS L +F D D Y+E T V Q+F E GE FR+ E +
Sbjct: 4 IFLIGYMGAGKTTVGKVLSQQLGLSFIDLDHYIEGRYHKT-VGQLFAERGEEAFRDIERR 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L++++ +V+TGGGA N FM + G TV+L V ++ LA+R+ + P+L
Sbjct: 63 MLREVAAFEDVLVSTGGGAPCFFDNIEFMNEAGQTVYLKVSVEELAKRLELCKSTR-PIL 121
Query: 216 DYDSADSYTKAFTALSALSKE 236
S D K+F A S +E
Sbjct: 122 KGRSGDE-LKSFIAESLEKRE 141
>gi|168217168|ref|ZP_02642793.1| shikimate kinase [Clostridium perfringens NCTC 8239]
gi|182380745|gb|EDT78224.1| shikimate kinase [Clostridium perfringens NCTC 8239]
Length = 171
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 6/151 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GM G+GKTT+G LS L F D D+++E+ G + ++F + GE FR+ ESK
Sbjct: 6 VLLIGMPGAGKTTIGRDLSKVLKMNFLDMDEFIER-STGKEIKELFAQ-GEEVFRDLESK 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
+ + LS + V+++GGG V R N ++ ITVF+N PLD + + + T+ PLL
Sbjct: 64 SCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLI---MEDIDTEGRPLL- 119
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADAT 247
+D + T + L K+ S+ D T
Sbjct: 120 WDGKERLTNLYRDRIDLYKKHSDIEIINDGT 150
>gi|408675274|ref|YP_006875022.1| Shikimate kinase [Emticicia oligotrophica DSM 17448]
gi|387856898|gb|AFK04995.1| Shikimate kinase [Emticicia oligotrophica DSM 17448]
Length = 172
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+GM SGK+T+G ++ +L Y F D D +E + G +A+IF +GE YFR+ E++
Sbjct: 5 IFLIGMPSSGKSTLGRQIAKSLGYEFVDLDLRIE-IAEGKKIAEIFSLNGEEYFRKVENQ 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+K+ + VVATGGG ++++ GI++FL+V + L R+ + PL
Sbjct: 64 QLKKIIKDSKMVVATGGGTPCYYDGLDYIKENGISIFLDVKPEMLVERMKVSKKNDRPLF 123
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
D +S +S ER Y AD TV
Sbjct: 124 DLESK----SLLDTISQTYNERLSTYQKADITV 152
>gi|209965948|ref|YP_002298863.1| shikimate kinase [Rhodospirillum centenum SW]
gi|209959414|gb|ACJ00051.1| shikimate kinase [Rhodospirillum centenum SW]
Length = 198
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 85/155 (54%), Gaps = 10/155 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ L LVG+MG+GKT++G+ L+ L F D+D +E G ++ +IF GEA FR+ E
Sbjct: 11 RTLVLVGLMGAGKTSIGKRLAAKLHLPFVDADHEIES-AAGCTIQEIFDRFGEAQFRDGE 69
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+ + +L +V++TGGGA + P +R+ G++V+L PLD L R D+ P
Sbjct: 70 RRVIARLLEGQVRVLSTGGGAFMHPETRALIRERGLSVWLRAPLDLLVARTGR--RDNRP 127
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + L+AL +R YA AD TV
Sbjct: 128 LLKQGNPRDI------LAALMAQRYPVYAEADITV 156
>gi|345022078|ref|ZP_08785691.1| shikimate kinase [Ornithinibacillus scapharcae TW25]
Length = 170
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G MGSGKTT LS L ++ D+DK +E+L G T + IF E GE+ FR YES+
Sbjct: 4 IFLIGFMGSGKTTTAVKLSKTLQTSYIDTDKLIEELRGKT-IPSIFAEEGESAFRNYESE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRI 204
L + + +V+TGGG V R N +FM+ G+ ++L LD + R+
Sbjct: 63 TLHMIE--NKLIVSTGGGIVEREENIQFMQDNGVIIYLKTSLDVITNRL 109
>gi|313669029|ref|YP_004049313.1| shikimate kinase [Neisseria lactamica 020-06]
gi|313006491|emb|CBN87954.1| putative shikimate kinase [Neisseria lactamica 020-06]
Length = 170
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+G+MG+GKTT+G ++ LDY F DSD + G S+ IF+ GE FR E+
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAA-AAGVSIPTIFEMEGERGFRSRETA 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+KL ++P V++TGGGAV++ N +R+ G V+L+ P + L R +S PLL
Sbjct: 67 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLL 124
Query: 216 DYDSADSYTKAFTALSALSKERSEAY-ANADATVSLLN 252
AD K L L R Y AD TV N
Sbjct: 125 QV--ADPLGK----LRELYAARDPVYRQTADFTVESAN 156
>gi|268318032|ref|YP_003291751.1| shikimate kinase [Rhodothermus marinus DSM 4252]
gi|262335566|gb|ACY49363.1| Shikimate kinase [Rhodothermus marinus DSM 4252]
Length = 192
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++L G MG GK+T+G +L+ L YTF D D + + G S+ +IF E GEA FR E
Sbjct: 11 IYLTGFMGCGKSTIGPLLARRLGYTFLDLDALIVR-QAGRSIPEIFAEGGEAAFRALERD 69
Query: 157 ALQKLSLVPQQVVATGGGAVVRP--LNWRFMRQGITVFLNVPLDALARRIA 205
AL++ + + V+ATGGGA+V L W +R G V+L V D LARR+A
Sbjct: 70 ALRRTAALDAYVIATGGGALVSDDNLAW-ALRNGRVVYLQVSADELARRLA 119
>gi|290968006|ref|ZP_06559555.1| shikimate kinase [Megasphaera genomosp. type_1 str. 28L]
gi|335049387|ref|ZP_08542383.1| shikimate kinase [Megasphaera sp. UPII 199-6]
gi|290781912|gb|EFD94491.1| shikimate kinase [Megasphaera genomosp. type_1 str. 28L]
gi|333763210|gb|EGL40671.1| shikimate kinase [Megasphaera sp. UPII 199-6]
Length = 167
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 90/168 (53%), Gaps = 17/168 (10%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GM G GKTT+G L+D L + F D+D+ E+L G SVA +F + GEAYFR++E++
Sbjct: 6 IILIGMPGCGKTTLGRKLADRLAWPFRDTDRVAERL-SGQSVAALF-QRGEAYFRDWETR 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWR-FMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
A + V+A GGG V+RP N + + + + +++ PL LA A ++ PLL
Sbjct: 64 ACRVCGGETHTVIACGGGTVLRPENMQCWSHRSVIIWIRRPLALLA---TAGQVETRPLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA------DATVSLLNLAACI 257
+ Y+ L A + E YA A + +L L AC+
Sbjct: 121 QGNKETVYS-----LYAQRRGLYEQYAQATVRNDGEEETALQQLTACV 163
>gi|289548323|ref|YP_003473311.1| shikimate kinase [Thermocrinis albus DSM 14484]
gi|289181940|gb|ADC89184.1| Shikimate kinase [Thermocrinis albus DSM 14484]
Length = 166
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 16/156 (10%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG M SGK+TVG L+ L + F D D+ +++ T VA IF+E GEAYFR E +
Sbjct: 6 VFLVGFMCSGKSTVGRELAHTLGWEFVDVDEEIQRQENNT-VAGIFQEKGEAYFRNLELQ 64
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
L +LS + V++TGGG P+ M+ +G+ V+L++P R G ++ PLL
Sbjct: 65 VLTQLSQRNRLVISTGGGLGANPVAMELMKNKGLVVWLDIPFQEFLERCK--GDENRPLL 122
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA----DAT 247
K+ + + ++R E Y A DAT
Sbjct: 123 --------KKSLEEIQLIYQKRKEVYREAHLHLDAT 150
>gi|37525212|ref|NP_928556.1| shikimate kinase II [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|81419992|sp|Q7N7B0.1|AROL_PHOLL RecName: Full=Shikimate kinase 2; Short=SK 2
gi|36784639|emb|CAE13539.1| Shikimate kinase II (SKII) [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 174
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 73/111 (65%), Gaps = 3/111 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LF+VG G+GKTTVG++L++ L YTF D+D ++++ ++A I + G FR+ E
Sbjct: 3 QILFIVGARGAGKTTVGKLLANELSYTFIDTDHHIQQ-TSNMTIADIVNQQGWQQFRQLE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
S+ALQ+++ + +V++TGGG ++ N ++MRQ G ++L LA R+
Sbjct: 62 SQALQQVTQI-NRVISTGGGIILSAENRQYMRQNGTVIYLQASASILAERL 111
>gi|415946696|ref|ZP_11556486.1| Bifunctional shikimate kinase/3-dehydroquinate synthase
[Herbaspirillum frisingense GSF30]
gi|407758190|gb|EKF68054.1| Bifunctional shikimate kinase/3-dehydroquinate synthase
[Herbaspirillum frisingense GSF30]
Length = 602
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+FLVG+MG+GKTT+G L+ L+ F DSD +E G T + IF+ GE FR E+
Sbjct: 4 SIFLVGLMGAGKTTIGRALAKKLNKRFVDSDHEIEARTGAT-IPVIFEIEGEESFRRREA 62
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGIT-VFLNVPLDALARRIAAVGTD-SFP 213
+ +++LS P V+ATGGGAV+R N +++G T V+L ++ + +R G D + P
Sbjct: 63 EVIRELSAQPDIVLATGGGAVLRAENRENLKKGGTVVYLRASINQILQR---TGRDKNRP 119
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAY 241
LL +AD K L LS++R Y
Sbjct: 120 LL--QTADPRRK----LEELSRQRDPLY 141
>gi|395792702|ref|ZP_10472126.1| shikimate kinase [Bartonella vinsonii subsp. arupensis Pm136co]
gi|395432259|gb|EJF98248.1| shikimate kinase [Bartonella vinsonii subsp. arupensis Pm136co]
Length = 210
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 12/166 (7%)
Query: 86 REVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKES 145
+E+ S LD + L LVG+MG+GK+ +G+ ++ L F DSD+ +EK ++ ++FK
Sbjct: 16 KELLSVLDKRALVLVGLMGAGKSVIGQRIATMLHLPFYDSDQEIEK-AAQMTITELFKIY 74
Query: 146 GEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWR--FMRQGITVFLNVPLDALARR 203
GEA FR E + + L ++ATGGGA + N R + GI+++L V LD L +R
Sbjct: 75 GEAEFRALEQRVILNLMKKSPLILATGGGAYMNE-NIRKAIHQNGISIWLKVDLDILMKR 133
Query: 204 IAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
+ T PLL + + L ++R+ YA A+ T++
Sbjct: 134 VLRRPTR--PLLQTANPKE------TMQKLMEQRNPVYAKANLTIN 171
>gi|167628378|ref|YP_001678877.1| shikimate kinase [Heliobacterium modesticaldum Ice1]
gi|167591118|gb|ABZ82866.1| shikimate kinase [Heliobacterium modesticaldum Ice1]
Length = 200
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 88/166 (53%), Gaps = 10/166 (6%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
SC + + L+G MG+GK+TVG L+ L F D+D VEK+ G T +AQIF GEA
Sbjct: 11 SCSHKKNVVLIGFMGTGKSTVGRRLAARLGCPFVDTDGEVEKVTGMT-IAQIFDRYGEAR 69
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVG 208
FR E + +K++ + VVATGGG V+ P N +R G+ + L + + R+
Sbjct: 70 FRSEERQMARKVAALEGVVVATGGGIVLNPENVAALRSSGVLIGLEATAEVIWSRVTR-- 127
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLA 254
+ PLL DS+ + + A +R YA AD TV +L+
Sbjct: 128 RNHRPLLQKDSSVDHLREMMA------KRRPYYACADMTVDTSSLS 167
>gi|433488980|ref|ZP_20446130.1| shikimate kinase family protein [Neisseria meningitidis M13255]
gi|432221309|gb|ELK77120.1| shikimate kinase family protein [Neisseria meningitidis M13255]
Length = 170
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+G+MG+GKTT+G ++ LDY F DSD + G + IF+ GE FR E+
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAS-AAGVPIPTIFEMEGEQGFRSRETA 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+KL ++P V++TGGGAV++ N +R+ G V+L+ P + L R +S PLL
Sbjct: 67 ILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLL 124
Query: 216 DYDSADSYTKAFTALSALSKERSEAY-ANADATVSLLN 252
AD K L L R Y AD TV N
Sbjct: 125 QV--ADPLAK----LRELYAARDPVYRQTADFTVESAN 156
>gi|157369261|ref|YP_001477250.1| shikimate kinase II [Serratia proteamaculans 568]
gi|166988290|sp|A8GAI2.1|AROL_SERP5 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|157321025|gb|ABV40122.1| Shikimate kinase [Serratia proteamaculans 568]
Length = 174
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G+GKTTVG L+ AL Y F D+D ++++ SVA++ ++ G FR E
Sbjct: 3 QTIFMVGARGAGKTTVGSALALALGYQFIDTDLFMQQTT-QMSVAEMVEQEGWLGFRRRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS 211
S ALQ ++ P VVATGGGA++ N RFMRQ G ++L P + LA+R+ D+
Sbjct: 62 SIALQTVTQ-PSTVVATGGGAILAEENRRFMRQHGKVIYLRSPAEVLAQRLEEYPQDT 118
>gi|434387800|ref|YP_007098411.1| shikimate kinase [Chamaesiphon minutus PCC 6605]
gi|428018790|gb|AFY94884.1| shikimate kinase [Chamaesiphon minutus PCC 6605]
Length = 202
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 26/198 (13%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSD----KYVEKLMG------------- 134
L G ++L+GMMG GK+TV +L+D L Y F D+D K K +G
Sbjct: 4 LQGLNIYLIGMMGCGKSTVAPLLADRLGYNFLDTDITLAKSCAKPLGYDFEDTDLSESEL 63
Query: 135 -GTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFL 193
+ ++F+ GE FR E++ L ++S + VVATGGG + NW + QG+ ++L
Sbjct: 64 IAKIIRELFQTVGEPEFRAIETQVLAEVSAYTRLVVATGGGIAIERENWNHLHQGLVIWL 123
Query: 194 NVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLL-N 252
+ +D L R+ G + P+L +S D +K L L ER YA AD + +L +
Sbjct: 124 DPAVDLLVERLQ--GDTTRPIL-ANSEDLQSK----LDQLLSERRYRYAEADIHLPVLRD 176
Query: 253 LAACIGLKDVLDITPTTI 270
L A + +L PT +
Sbjct: 177 LTAEEIVDRILAAIPTVL 194
>gi|82701785|ref|YP_411351.1| shikimate kinase [Nitrosospira multiformis ATCC 25196]
gi|115312154|sp|Q2YBB2.1|AROK_NITMU RecName: Full=Shikimate kinase; Short=SK
gi|82409850|gb|ABB73959.1| shikimate kinase [Nitrosospira multiformis ATCC 25196]
Length = 195
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVGMMG+GKTTVG +LS L+ TF DSD+ ++K G S+ IF+ GE FR E++
Sbjct: 26 IFLVGMMGAGKTTVGRLLSHFLEKTFYDSDREIQKRT-GVSIPTIFEIEGEEGFRRRETE 84
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITV-FLNVPLDALARR 203
L +L ++ATGGGAV+ +N ++ G TV +L +D L RR
Sbjct: 85 ILSELMNARNIILATGGGAVLSGVNRAMLKHGGTVIYLRASIDDLWRR 132
>gi|392394461|ref|YP_006431063.1| shikimate kinase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390525539|gb|AFM01270.1| shikimate kinase [Desulfitobacterium dehalogenans ATCC 51507]
Length = 205
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 12/154 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVG MG+GK+TVG L+ L+ F D+D +E+L T V++IF+ GE FR E
Sbjct: 34 IVLVGFMGTGKSTVGRRLAKLLEREFIDTDVEIERLTEMT-VSEIFRRHGETRFRSEERL 92
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWR-FMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
+++L+ V+ATGGG V+ P NW+ R G+ + L PLD + +RI + PLL
Sbjct: 93 LVKRLAEHKGYVIATGGGTVLNPENWQDLARSGVIIGLYAPLDEIYKRIGY--RNDRPLL 150
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVS 249
D + + L +R Y AD T+
Sbjct: 151 RGDRQE--------VELLWAKRQPIYDQADWTID 176
>gi|401564998|ref|ZP_10805856.1| shikimate kinase [Selenomonas sp. FOBRC6]
gi|400188360|gb|EJO22531.1| shikimate kinase [Selenomonas sp. FOBRC6]
Length = 173
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 86/154 (55%), Gaps = 9/154 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKT+VG +L+ L F D D+ +E+ G S+ +F+E GE YFR E +
Sbjct: 4 VVLIGFMGTGKTSVGRLLAARLGCAFHDLDRKIEE-KHGMSIPAMFREHGEPYFRAREKE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A+++ + V+ATGGG V N +RQ GI V L +D + +R +A G + P+L
Sbjct: 63 AVREAAGRTNLVIATGGGTVKDAENVAILRQNGILVALTADVDTILQRTSARG--ARPVL 120
Query: 216 DY-DSADSYTKAFTALSALSKERSEAYANADATV 248
D+ D+ D A+ L ER Y AD TV
Sbjct: 121 DHADAGDRR----AAVVQLLDERHSLYDGADITV 150
>gi|402571545|ref|YP_006620888.1| shikimate kinase [Desulfosporosinus meridiei DSM 13257]
gi|402252742|gb|AFQ43017.1| shikimate kinase [Desulfosporosinus meridiei DSM 13257]
Length = 177
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 82/153 (53%), Gaps = 12/153 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GK+TVG+ L+ +L + F D+D + ++ SV++IF+ GE FR ES
Sbjct: 4 IVLIGFMGTGKSTVGKRLAQSLSWNFVDTDCEIGEVTS-LSVSEIFRRHGETRFRSEESI 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
+ +LS Q V+ATGGG V+ PLN + + GI + L+ L+A+ RI + PLL
Sbjct: 63 VVTRLSQQEQLVIATGGGTVLNPLNLSALAKNGIVIALHASLEAILSRIGH--KNDRPLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
A+ L ER Y AD V
Sbjct: 121 KGPRE--------AIEKLWSERQNVYVQADYIV 145
>gi|257095714|ref|YP_003169355.1| shikimate kinase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257048238|gb|ACV37426.1| Shikimate kinase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 178
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 93 DGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFRE 152
D + ++LVG+MG+GKTT+G+ L+ L Y F DSD +E G S+ IF+ GE FR
Sbjct: 6 DERNVYLVGLMGAGKTTIGKALARRLAYGFVDSDHEIEART-GVSLPTIFEIEGEEGFRR 64
Query: 153 YESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
E+ + L+ + QVVATGGG V+RP N ++ G ++L+VPL L R
Sbjct: 65 REALVIADLARLGGQVVATGGGVVLRPDNRENLKDSGFVIYLDVPLQTLCER 116
>gi|123443391|ref|YP_001007365.1| shikimate kinase [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|166988291|sp|A1JNV2.1|AROL_YERE8 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|122090352|emb|CAL13220.1| shikimate kinase II [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 174
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G+GKTT+G+ L+ AL Y F D+D ++++ + +SVA+I G FR E
Sbjct: 3 QTIFMVGARGAGKTTIGKALAQALGYRFIDTDLFMQQTL-QSSVAEIVAREGWDGFRLRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIA 205
S ALQ ++ P+ VVATGGGAV+ N FMRQ G+ ++L + LA R+A
Sbjct: 62 SMALQTVT-APKTVVATGGGAVLSHDNRTFMRQHGMVIYLRASANVLAERLA 112
>gi|114570823|ref|YP_757503.1| shikimate kinase [Maricaulis maris MCS10]
gi|114341285|gb|ABI66565.1| shikimate kinase [Maricaulis maris MCS10]
Length = 179
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 89/170 (52%), Gaps = 10/170 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ L L+G+MG GKTTVG L+ AL F D+D+ VEK G SV++IF++ GE FR+ E
Sbjct: 9 KSLVLIGLMGVGKTTVGRRLAHALKLQFRDADEEVEK-AAGRSVSEIFEDFGEHAFRDGE 67
Query: 155 SKALQKLSLVPQQVVATGGGAVV-RPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
K + +L P V+A GGGA V R +++L ++ L +R+A D+ P
Sbjct: 68 RKVIARLLEEPPMVLALGGGAFVDDETRERVKAMATSIWLQADVETLVQRVAR--RDTRP 125
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVL 263
LL + + T L L +R AYA AD V + I L +L
Sbjct: 126 LLRDEDPE------TVLRTLLNKRQAAYAEADIHVDASGGSHQITLDSIL 169
>gi|110800453|ref|YP_695146.1| shikimate kinase [Clostridium perfringens ATCC 13124]
gi|422345138|ref|ZP_16426052.1| hypothetical protein HMPREF9476_00125 [Clostridium perfringens
WAL-14572]
gi|110675100|gb|ABG84087.1| shikimate kinase [Clostridium perfringens ATCC 13124]
gi|373227863|gb|EHP50173.1| hypothetical protein HMPREF9476_00125 [Clostridium perfringens
WAL-14572]
Length = 167
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 6/151 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GM G+GKTT+G LS L F D D+++E+ G + ++F + GE FR+ ESK
Sbjct: 6 VLLIGMPGAGKTTIGRDLSTVLKMNFLDMDEFIER-STGKEIKELFAQ-GEEVFRDLESK 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
+ + LS + V+++GGG V R N ++ ITVF+N PLD + + + T+ PLL
Sbjct: 64 SCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLI---MEDIDTEGRPLL- 119
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADAT 247
+D + T + L K+ S+ D T
Sbjct: 120 WDGKERLTNLYRDRIDLYKKHSDIEIINDGT 150
>gi|15677649|ref|NP_274810.1| shikimate kinase [Neisseria meningitidis MC58]
gi|161869407|ref|YP_001598574.1| shikimate kinase [Neisseria meningitidis 053442]
gi|218767604|ref|YP_002342116.1| shikimate kinase [Neisseria meningitidis Z2491]
gi|254804372|ref|YP_003082593.1| shikimate kinase [Neisseria meningitidis alpha14]
gi|385329059|ref|YP_005883362.1| putative shikimate kinase [Neisseria meningitidis alpha710]
gi|385337450|ref|YP_005891323.1| shikimate kinase [Neisseria meningitidis WUE 2594]
gi|385341336|ref|YP_005895207.1| shikimate kinase [Neisseria meningitidis M01-240149]
gi|385853871|ref|YP_005900385.1| shikimate kinase [Neisseria meningitidis H44/76]
gi|385855828|ref|YP_005902341.1| shikimate kinase [Neisseria meningitidis M01-240355]
gi|385856634|ref|YP_005903146.1| shikimate kinase [Neisseria meningitidis NZ-05/33]
gi|416184647|ref|ZP_11613081.1| shikimate kinase [Neisseria meningitidis M13399]
gi|416189027|ref|ZP_11615043.1| shikimate kinase [Neisseria meningitidis M0579]
gi|416198479|ref|ZP_11618955.1| shikimate kinase [Neisseria meningitidis CU385]
gi|416214544|ref|ZP_11622940.1| shikimate kinase [Neisseria meningitidis M01-240013]
gi|421538776|ref|ZP_15984948.1| putative shikimate kinase [Neisseria meningitidis 93003]
gi|421550489|ref|ZP_15996493.1| putative shikimate kinase [Neisseria meningitidis 69166]
gi|421555515|ref|ZP_16001445.1| putative shikimate kinase [Neisseria meningitidis 98008]
gi|421557768|ref|ZP_16003666.1| putative shikimate kinase [Neisseria meningitidis 80179]
gi|421566106|ref|ZP_16011865.1| putative shikimate kinase [Neisseria meningitidis NM3081]
gi|427827728|ref|ZP_18994752.1| shikimate kinase family protein [Neisseria meningitidis H44/76]
gi|433472438|ref|ZP_20429813.1| shikimate kinase family protein [Neisseria meningitidis 68094]
gi|433476230|ref|ZP_20433565.1| shikimate kinase family protein [Neisseria meningitidis 88050]
gi|433478777|ref|ZP_20436081.1| shikimate kinase family protein [Neisseria meningitidis 70012]
gi|433480380|ref|ZP_20437662.1| shikimate kinase family protein [Neisseria meningitidis 63041]
gi|433505623|ref|ZP_20462556.1| shikimate kinase family protein [Neisseria meningitidis 9506]
gi|433507802|ref|ZP_20464700.1| shikimate kinase family protein [Neisseria meningitidis 9757]
gi|433509996|ref|ZP_20466853.1| shikimate kinase family protein [Neisseria meningitidis 12888]
gi|433512007|ref|ZP_20468822.1| shikimate kinase family protein [Neisseria meningitidis 4119]
gi|433514118|ref|ZP_20470902.1| shikimate kinase family protein [Neisseria meningitidis 63049]
gi|433516342|ref|ZP_20473105.1| shikimate kinase family protein [Neisseria meningitidis 2004090]
gi|433518242|ref|ZP_20474982.1| shikimate kinase family protein [Neisseria meningitidis 96023]
gi|433520489|ref|ZP_20477201.1| shikimate kinase family protein [Neisseria meningitidis 65014]
gi|433523523|ref|ZP_20480191.1| shikimate kinase family protein [Neisseria meningitidis 97020]
gi|433526787|ref|ZP_20483410.1| shikimate kinase family protein [Neisseria meningitidis 69096]
gi|433527578|ref|ZP_20484190.1| shikimate kinase family protein [Neisseria meningitidis NM3652]
gi|433529779|ref|ZP_20486374.1| shikimate kinase family protein [Neisseria meningitidis NM3642]
gi|433531966|ref|ZP_20488533.1| shikimate kinase family protein [Neisseria meningitidis 2007056]
gi|433535221|ref|ZP_20491754.1| shikimate kinase family protein [Neisseria meningitidis 2001212]
gi|433537302|ref|ZP_20493798.1| shikimate kinase family protein [Neisseria meningitidis 77221]
gi|433538323|ref|ZP_20494807.1| shikimate kinase family protein [Neisseria meningitidis 70030]
gi|433541721|ref|ZP_20498164.1| shikimate kinase family protein [Neisseria meningitidis 63006]
gi|54036756|sp|P63600.1|AROK_NEIMB RecName: Full=Putative shikimate kinase; Short=SK
gi|54040825|sp|P63599.1|AROK_NEIMA RecName: Full=Putative shikimate kinase; Short=SK
gi|189046333|sp|A9M1U5.1|AROK_NEIM0 RecName: Full=Shikimate kinase; Short=SK
gi|7227066|gb|AAF42148.1| shikimate kinase [Neisseria meningitidis MC58]
gi|121051612|emb|CAM07912.1| putative shikimate kinase [Neisseria meningitidis Z2491]
gi|161594960|gb|ABX72620.1| shikimate kinase [Neisseria meningitidis 053442]
gi|254667914|emb|CBA04077.1| Shikimate kinase [Neisseria meningitidis alpha14]
gi|308389911|gb|ADO32231.1| putative shikimate kinase [Neisseria meningitidis alpha710]
gi|316984414|gb|EFV63387.1| shikimate kinase family protein [Neisseria meningitidis H44/76]
gi|319409864|emb|CBY90177.1| shikimate kinase (SK) [Neisseria meningitidis WUE 2594]
gi|325133589|gb|EGC56250.1| shikimate kinase [Neisseria meningitidis M13399]
gi|325135597|gb|EGC58214.1| shikimate kinase [Neisseria meningitidis M0579]
gi|325139634|gb|EGC62173.1| shikimate kinase [Neisseria meningitidis CU385]
gi|325143816|gb|EGC66132.1| shikimate kinase [Neisseria meningitidis M01-240013]
gi|325200875|gb|ADY96330.1| shikimate kinase [Neisseria meningitidis H44/76]
gi|325201542|gb|ADY96996.1| shikimate kinase [Neisseria meningitidis M01-240149]
gi|325204769|gb|ADZ00223.1| shikimate kinase [Neisseria meningitidis M01-240355]
gi|325207523|gb|ADZ02975.1| shikimate kinase [Neisseria meningitidis NZ-05/33]
gi|389606501|emb|CCA45414.1| shikimate kinase [Neisseria meningitidis alpha522]
gi|402315483|gb|EJU51046.1| putative shikimate kinase [Neisseria meningitidis 93003]
gi|402329752|gb|EJU65106.1| putative shikimate kinase [Neisseria meningitidis 98008]
gi|402329844|gb|EJU65195.1| putative shikimate kinase [Neisseria meningitidis 69166]
gi|402333643|gb|EJU68943.1| putative shikimate kinase [Neisseria meningitidis 80179]
gi|402341455|gb|EJU76633.1| putative shikimate kinase [Neisseria meningitidis NM3081]
gi|432206093|gb|ELK62107.1| shikimate kinase family protein [Neisseria meningitidis 68094]
gi|432208085|gb|ELK64064.1| shikimate kinase family protein [Neisseria meningitidis 88050]
gi|432212577|gb|ELK68514.1| shikimate kinase family protein [Neisseria meningitidis 70012]
gi|432214151|gb|ELK70057.1| shikimate kinase family protein [Neisseria meningitidis 63041]
gi|432239356|gb|ELK94910.1| shikimate kinase family protein [Neisseria meningitidis 9757]
gi|432239510|gb|ELK95062.1| shikimate kinase family protein [Neisseria meningitidis 9506]
gi|432244934|gb|ELL00413.1| shikimate kinase family protein [Neisseria meningitidis 12888]
gi|432245553|gb|ELL01021.1| shikimate kinase family protein [Neisseria meningitidis 4119]
gi|432246005|gb|ELL01467.1| shikimate kinase family protein [Neisseria meningitidis 63049]
gi|432251463|gb|ELL06830.1| shikimate kinase family protein [Neisseria meningitidis 2004090]
gi|432251980|gb|ELL07340.1| shikimate kinase family protein [Neisseria meningitidis 96023]
gi|432252155|gb|ELL07513.1| shikimate kinase family protein [Neisseria meningitidis 65014]
gi|432259078|gb|ELL14354.1| shikimate kinase family protein [Neisseria meningitidis 69096]
gi|432261580|gb|ELL16828.1| shikimate kinase family protein [Neisseria meningitidis 97020]
gi|432266478|gb|ELL21661.1| shikimate kinase family protein [Neisseria meningitidis NM3652]
gi|432268611|gb|ELL23778.1| shikimate kinase family protein [Neisseria meningitidis 2007056]
gi|432268871|gb|ELL24036.1| shikimate kinase family protein [Neisseria meningitidis NM3642]
gi|432270173|gb|ELL25317.1| shikimate kinase family protein [Neisseria meningitidis 2001212]
gi|432271725|gb|ELL26847.1| shikimate kinase family protein [Neisseria meningitidis 77221]
gi|432275194|gb|ELL30270.1| shikimate kinase family protein [Neisseria meningitidis 70030]
gi|432275924|gb|ELL30989.1| shikimate kinase family protein [Neisseria meningitidis 63006]
Length = 170
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+G+MG+GKTT+G ++ LDY F DSD + G + IF+ GE FR E+
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAA-AAGVPIPTIFEMEGEQGFRSRETA 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+KL ++P V++TGGGAV++ N +R+ G V+L+ P + L R +S PLL
Sbjct: 67 ILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLL 124
Query: 216 DYDSADSYTKAFTALSALSKERSEAY-ANADATVSLLN 252
AD K L L R Y AD TV N
Sbjct: 125 QV--ADPLAK----LRELYAARDPVYRQTADFTVESAN 156
>gi|110598517|ref|ZP_01386787.1| Shikimate kinase [Chlorobium ferrooxidans DSM 13031]
gi|110339890|gb|EAT58395.1| Shikimate kinase [Chlorobium ferrooxidans DSM 13031]
Length = 253
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 86 REVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKES 145
RE A + +FL G GSGK+T+G +L+++L Y F D D+ +EK G ++ +IF E
Sbjct: 59 REYAVTKNYTLIFLTGFSGSGKSTIGPLLANSLGYEFVDLDQTIEK-RAGKAITRIFAEE 117
Query: 146 GEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
GEA FRE E +ALQ++ V++ GGG + +W +R+ G V+L LARR+
Sbjct: 118 GEACFRELELQALQEVVNRTNLVISLGGGVLENERSWALVRESGTLVYLKSSPKTLARRL 177
Query: 205 AAVGTDSFPLL--DYDSADSYTKAFTALSALSKERSEAYANADATV 248
PLL + D S + ++++ R Y +A+ +V
Sbjct: 178 C--NKSDRPLLKGENDRKLSREEIEEKITSILMRREPRYESANISV 221
>gi|423713364|ref|ZP_17687624.1| shikimate kinase [Bartonella vinsonii subsp. arupensis OK-94-513]
gi|395423405|gb|EJF89600.1| shikimate kinase [Bartonella vinsonii subsp. arupensis OK-94-513]
Length = 210
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 12/166 (7%)
Query: 86 REVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKES 145
+E+ S LD + L LVG+MG+GK+ +G+ ++ L F DSD+ +EK ++ ++FK
Sbjct: 16 KELLSVLDKRALVLVGLMGAGKSVIGQRIATMLHLPFYDSDQEIEK-AAQMTITELFKIY 74
Query: 146 GEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWR--FMRQGITVFLNVPLDALARR 203
GEA FR E + + L ++ATGGGA + N R + GI+++L V LD L +R
Sbjct: 75 GEAEFRALEQRVILNLMKKSPLILATGGGAYMNE-NIRKAIHQNGISIWLKVDLDILMKR 133
Query: 204 IAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
+ T PLL + + L ++R+ YA A+ T++
Sbjct: 134 VLRRPTR--PLLQTANPKE------TMQKLMEQRNPVYAKANLTIN 171
>gi|89895137|ref|YP_518624.1| hypothetical protein DSY2391 [Desulfitobacterium hafniense Y51]
gi|89334585|dbj|BAE84180.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 186
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 84 KGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFK 143
+G ++ + LVG MG+GK+TVG L+ L F D+D +E+L T V++IF+
Sbjct: 3 EGEGLSGAAHNDNIVLVGFMGTGKSTVGRRLAKLLGREFIDTDLEIERLTEMT-VSEIFR 61
Query: 144 ESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALAR 202
GE FR E +++L+ V+ATGGG V+ P NWR + Q G+ + L PLD + +
Sbjct: 62 RHGETRFRSEERLLVKRLAEQKGYVIATGGGTVLNPENWRDLAQSGVIIGLYAPLDEIYK 121
Query: 203 RIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
RI + PLL D + L +R Y AD T+
Sbjct: 122 RIGY--RNDRPLLRGDRQ--------VVEELWAKRQPIYNQADWTI 157
>gi|407473682|ref|YP_006788082.1| shikimate kinase AroK [Clostridium acidurici 9a]
gi|407050190|gb|AFS78235.1| shikimate kinase AroK [Clostridium acidurici 9a]
Length = 142
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 79/131 (60%), Gaps = 9/131 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKY-VEKLMGGTSVAQIFKESGEAYFREY 153
+ + L+GM G GKTT+GE L+ L Y F D DKY VEK S+ ++F E GE YFR+
Sbjct: 3 KSIVLIGMPGCGKTTIGEKLAIKLGYEFCDIDKYIVEK--EKKSIDEMF-EHGEEYFRDV 59
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSF 212
ES ++ +S + V++TGGG V R N R +++ GI +F+N P++ + ++ V +
Sbjct: 60 ESNGVEDVSKKEKVVISTGGGVVKRERNIRALKENGIIIFINRPIENI---VSDVDVEKR 116
Query: 213 PLLDYDSADSY 223
PLL D + Y
Sbjct: 117 PLLK-DGKEKY 126
>gi|297170347|gb|ADI21382.1| shikimate kinase [uncultured gamma proteobacterium HF0010_20H22]
Length = 167
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 90/171 (52%), Gaps = 13/171 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GK+T G+ LS+ LDY F D+DK +EK + IF+++GE YFR+ ESK
Sbjct: 3 VFLVGPMGTGKSTTGKNLSEELDYDFCDTDKLIEK-AERRKIKDIFEQNGEDYFRQKESK 61
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS--FPL 214
AL + + V+ATGGG V R N F+ V LD+ R DS PL
Sbjct: 62 ALDETKTLQNVVIATGGGIVEREENRLFLECEDKVIF---LDSSPERQYERTKDSKKRPL 118
Query: 215 LDYDSADSYTKAFTALSALSKERSEAY-ANADATVSLLNLAACIGLKDVLD 264
L + D L L ++R Y A + +S+ NL+ LK ++D
Sbjct: 119 L--NDGD----GLEILKKLYEKRINFYEAVSKKKISMDNLSTDEILKKIID 163
>gi|295093407|emb|CBK82498.1| shikimate dehydrogenase [Coprococcus sp. ART55/1]
Length = 461
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 12/159 (7%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+G MG GKTTVGE L+ L++ D D Y+E G S+ QIF + GE YFR+ E
Sbjct: 292 ENVILIGFMGCGKTTVGEALARKLNFDLLDVDSYIED-KAGCSIKQIFADKGEEYFRQLE 350
Query: 155 SKALQKL-SLVPQQVVATGGGAVVRPLNW-RFMRQGITVFLNVPLDALARRIAAVGTDSF 212
+ L++L S + V++TGGG +R N R G ++L+V + + RR+A G +
Sbjct: 351 TDTLKELNSRLSHTVISTGGGLPMRQANVDELRRMGRIIYLDVKPEEVVRRLA--GDTTR 408
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAY-ANADATVSL 250
PLL ++ D + L +R Y A AD V +
Sbjct: 409 PLLQGENVDQRVR------KLMGQRGPVYEAAADIIVPV 441
>gi|90420214|ref|ZP_01228122.1| shikimate kinase, AroK [Aurantimonas manganoxydans SI85-9A1]
gi|90335548|gb|EAS49298.1| shikimate kinase, AroK [Aurantimonas manganoxydans SI85-9A1]
Length = 193
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 10/187 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+ L + + LVG+MG+GKTTVG L+ LD F D+D +E L+ S+ ++F+ GE
Sbjct: 13 IQDRLGTRSVTLVGLMGAGKTTVGRRLAALLDLPFHDTDHEIE-LVSRMSIPELFESYGE 71
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAA 206
FR E++ + +L+ QVVATGGGA + ++Q ITV+L LD L R+
Sbjct: 72 PEFRALEARVVGRLTAEGPQVVATGGGAYMHEETRSLLKQSAITVWLKADLDTLMDRVRR 131
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDIT 266
+ PLL D + + L + R YA AD T+ N+ + +++++
Sbjct: 132 RA--NRPLLKQDDPRA------VMRGLIETRYPIYAEADITIPTRNVKRDVIAQEIIEAL 183
Query: 267 PTTIAME 273
+A E
Sbjct: 184 DRHLATE 190
>gi|345876138|ref|ZP_08827913.1| shikimate kinase [Neisseria weaveri LMG 5135]
gi|417957890|ref|ZP_12600808.1| shikimate kinase [Neisseria weaveri ATCC 51223]
gi|343967095|gb|EGV35345.1| shikimate kinase [Neisseria weaveri LMG 5135]
gi|343967636|gb|EGV35879.1| shikimate kinase [Neisseria weaveri ATCC 51223]
Length = 177
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
LFL+G+MG+GKTT+G+ L+ L+ F DSD + + G S+ IF+ GE FR+ ES
Sbjct: 11 LFLIGLMGAGKTTLGKQLAQRLNRCFFDSDHEICQ-RTGVSIPTIFELEGEQGFRDRESN 69
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+ +L+ + V+ATGGGAV+RP N F+++ G ++L+ + L +R + PLL
Sbjct: 70 VINELTHMENIVLATGGGAVLRPENQSFLKKRGTVIYLHASPEVLLKRTQH--DTNRPLL 127
Query: 216 DYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACIGLKDVLDITPTT 269
D+ L L R Y + AD V L+ +L+I P +
Sbjct: 128 QVDN------PLAKLQELYNARDHIYRSLADVVVESDQPNCYKTLEHLLNILPQS 176
>gi|242083840|ref|XP_002442345.1| hypothetical protein SORBIDRAFT_08g018630 [Sorghum bicolor]
gi|241943038|gb|EES16183.1| hypothetical protein SORBIDRAFT_08g018630 [Sorghum bicolor]
Length = 273
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 106/190 (55%), Gaps = 6/190 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+++VG + K + ++L++++ Y + S++ +E ++GG + FKES E + E E++
Sbjct: 79 IYIVGTDCTAKRNIAKLLANSIIYRYLCSEELLEDVLGGKDALRAFKESDEKGYLEVETE 138
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALAR-RIAAVGTDSFPLL 215
L++L+ + V+ G GAV+ N +R G++++++VPL+ A + + GT +
Sbjct: 139 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLEMAANDMLKSTGTQA---- 194
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVL 275
DS+++A + L E E Y +D TVS+ ++A+ G V +T + +E++
Sbjct: 195 -TTDPDSFSQAMSKLRQRYDELKERYGVSDITVSVQSVASQRGYSSVDSVTLEDMVLEIV 253
Query: 276 VQAQKYLNSK 285
Q +K + +K
Sbjct: 254 RQIEKLIRAK 263
>gi|389704106|ref|ZP_10185820.1| shikimate kinase [Acinetobacter sp. HA]
gi|388611189|gb|EIM40295.1| shikimate kinase [Acinetobacter sp. HA]
Length = 178
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G T + IF++ GE FR E+
Sbjct: 12 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKTGAT-IPWIFEKEGEQGFRSRETV 70
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+ +L+ PQ V+ATGGGAV + N +++Q GI V+L P++ +R + PLL
Sbjct: 71 VIDELTSRPQLVLATGGGAVTQAPNREYLKQRGIVVYLYTPVEIQLQR--TYRDKNRPLL 128
Query: 216 DYDSADSYTKAFTAL 230
++ + K A+
Sbjct: 129 QVENPEQKLKDLLAI 143
>gi|197104210|ref|YP_002129587.1| shikimate kinase [Phenylobacterium zucineum HLK1]
gi|196477630|gb|ACG77158.1| shikimate kinase [Phenylobacterium zucineum HLK1]
Length = 187
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 10/170 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVG+MG GK++VG L+ AL F D+D VE G S++ IF + GEA FR+ E
Sbjct: 15 RTIALVGLMGVGKSSVGRRLASALGLPFRDADSEVEA-AAGRSISDIFADLGEAAFRDGE 73
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
+ + +L P V+ATGGGA + + ++ + I+V+L L+ LARR+ D+ P
Sbjct: 74 RRVIARLLDQPPHVLATGGGAFMNAETRQLIKSKAISVWLKTDLETLARRVGR--KDTRP 131
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVL 263
LL + L A ++ R YA AD TV ++A + + V+
Sbjct: 132 LL------AGKDPLEVLRAQAEVRYPVYAEADMTVETGDVAHHVTVDQVI 175
>gi|110802259|ref|YP_698020.1| shikimate kinase [Clostridium perfringens SM101]
gi|110682760|gb|ABG86130.1| shikimate kinase [Clostridium perfringens SM101]
Length = 167
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 6/151 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GM G+GKTT+G LS L F D D+++E+ G + ++F + GE FR+ ESK
Sbjct: 6 VLLIGMPGAGKTTIGRELSTVLKMNFLDMDEFIER-STGKEIKELFAQ-GEEVFRDLESK 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
+ + LS + V+++GGG V R N ++ ITVF+N PLD + + + T+ PLL
Sbjct: 64 SCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLI---MEDIDTEGRPLL- 119
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADAT 247
+D + T + L K+ S+ D T
Sbjct: 120 WDGKERLTNLYRDRIDLYKKHSDIEIINDGT 150
>gi|420257456|ref|ZP_14760214.1| shikimate kinase II [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|404515105|gb|EKA28882.1| shikimate kinase II [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 174
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G+GKTT+G+ L+ AL Y F D+D ++++ + +SVA+I G FR E
Sbjct: 3 QTIFMVGARGAGKTTIGKALAQALGYRFIDTDLFMQQTL-QSSVAEIVAREGWDGFRLRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIA 205
S ALQ ++ P+ VVATGGGAV+ N FMRQ G+ ++L + LA R+A
Sbjct: 62 SMALQTVT-APKTVVATGGGAVLSHDNRTFMRQHGMVIYLRASANVLAERLA 112
>gi|121634272|ref|YP_974517.1| shikimate kinase [Neisseria meningitidis FAM18]
gi|120865978|emb|CAM09715.1| putative shikimate kinase [Neisseria meningitidis FAM18]
Length = 171
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+G+MG+GKTT+G ++ LDY F DSD + G + IF+ GE FR E+
Sbjct: 9 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAA-AAGVPIPTIFEMEGEQGFRSRETA 67
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+KL ++P V++TGGGAV++ N +R+ G V+L+ P + L R +S PLL
Sbjct: 68 ILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPEILLERTRC--DNSRPLL 125
Query: 216 DYDSADSYTKAFTALSALSKERSEAY-ANADATVSLLN 252
AD K L L R Y AD TV N
Sbjct: 126 QV--ADPLAK----LRELYAARDPVYRQTADFTVESAN 157
>gi|291044585|ref|ZP_06570294.1| shikimate kinase [Neisseria gonorrhoeae DGI2]
gi|291011479|gb|EFE03475.1| shikimate kinase [Neisseria gonorrhoeae DGI2]
Length = 195
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+G+MG+GKTT+G ++ LDY F DSD + G + IF+ GE FR E+
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAA-AAGVPIPTIFEMEGEQGFRSRETA 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+KL ++P V++TGGGAV++ N +R+ G V+L+ P + L R +S PLL
Sbjct: 67 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLL 124
Query: 216 DYDSADSYTKAFTALSALSKERSEAY-ANADATVSLLN 252
AD K L L R Y AD TV N
Sbjct: 125 QV--ADPLAK----LRELYAARDPVYRQTADFTVESAN 156
>gi|126699447|ref|YP_001088344.1| Shikimate kinase (SK) [Clostridium difficile 630]
gi|254975474|ref|ZP_05271946.1| shikimate kinase [Clostridium difficile QCD-66c26]
gi|255092862|ref|ZP_05322340.1| shikimate kinase [Clostridium difficile CIP 107932]
gi|255101011|ref|ZP_05329988.1| shikimate kinase [Clostridium difficile QCD-63q42]
gi|255306865|ref|ZP_05351036.1| shikimate kinase [Clostridium difficile ATCC 43255]
gi|255314604|ref|ZP_05356187.1| shikimate kinase [Clostridium difficile QCD-76w55]
gi|255517278|ref|ZP_05384954.1| shikimate kinase [Clostridium difficile QCD-97b34]
gi|255650384|ref|ZP_05397286.1| shikimate kinase [Clostridium difficile QCD-37x79]
gi|260683498|ref|YP_003214783.1| shikimate kinase [Clostridium difficile CD196]
gi|260687094|ref|YP_003218227.1| shikimate kinase [Clostridium difficile R20291]
gi|306520340|ref|ZP_07406687.1| shikimate kinase [Clostridium difficile QCD-32g58]
gi|384361116|ref|YP_006198968.1| shikimate kinase [Clostridium difficile BI1]
gi|423091448|ref|ZP_17079569.1| shikimate kinase [Clostridium difficile 70-100-2010]
gi|115250884|emb|CAJ68709.1| Shikimate kinase (SK) [Clostridium difficile 630]
gi|260209661|emb|CBA63365.1| shikimate kinase [Clostridium difficile CD196]
gi|260213110|emb|CBE04513.1| shikimate kinase [Clostridium difficile R20291]
gi|357554930|gb|EHJ36623.1| shikimate kinase [Clostridium difficile 70-100-2010]
Length = 177
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+GM GSGKTT+G++L+ + +F D D Y+ ++ S+A++F E GE FR YE++
Sbjct: 9 LILIGMPGSGKTTIGKLLAKEYNCSFCDMDDYIIQI-SQKSIAELFSE-GEDIFRNYETQ 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A ++LS+ + V++TGGG + + +N +++ GI +F++ P+ + + + +S PLL
Sbjct: 67 ACRELSISDKTVISTGGGVIKKDVNMEILKETGIIIFIDRPIQKI---LEDININSRPLL 123
>gi|423082582|ref|ZP_17071171.1| shikimate kinase [Clostridium difficile 002-P50-2011]
gi|423087123|ref|ZP_17075513.1| shikimate kinase [Clostridium difficile 050-P50-2011]
gi|357545372|gb|EHJ27347.1| shikimate kinase [Clostridium difficile 050-P50-2011]
gi|357547700|gb|EHJ29575.1| shikimate kinase [Clostridium difficile 002-P50-2011]
Length = 177
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+GM GSGKTT+G++L+ + +F D D Y+ ++ S+A++F E GE FR YE++
Sbjct: 9 LILIGMPGSGKTTIGKLLAKEYNCSFCDMDDYIIQI-SQKSIAELFSE-GEDIFRNYETQ 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A ++LS+ + V++TGGG + + +N +++ GI +F++ P+ + + + +S PLL
Sbjct: 67 ACRELSISDKTVISTGGGVIKKDVNMEILKETGIIIFIDRPIQKI---LEDININSRPLL 123
>gi|304388334|ref|ZP_07370447.1| shikimate kinase [Neisseria meningitidis ATCC 13091]
gi|385339442|ref|YP_005893314.1| shikimate kinase [Neisseria meningitidis G2136]
gi|416164228|ref|ZP_11607160.1| shikimate kinase [Neisseria meningitidis N1568]
gi|416179598|ref|ZP_11611034.1| shikimate kinase [Neisseria meningitidis M6190]
gi|416193192|ref|ZP_11617069.1| shikimate kinase [Neisseria meningitidis ES14902]
gi|416207532|ref|ZP_11620930.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|416207609|ref|ZP_11620949.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|416207661|ref|ZP_11620967.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|421541107|ref|ZP_15987237.1| shikimate kinase [Neisseria meningitidis 93004]
gi|421547171|ref|ZP_15993209.1| shikimate kinase [Neisseria meningitidis NM183]
gi|421553376|ref|ZP_15999339.1| shikimate kinase [Neisseria meningitidis NM576]
gi|421562701|ref|ZP_16008524.1| shikimate kinase [Neisseria meningitidis NM2795]
gi|421906296|ref|ZP_16336196.1| Shikimate kinase [Neisseria meningitidis alpha704]
gi|433467856|ref|ZP_20425305.1| shikimate kinase family protein [Neisseria meningitidis 87255]
gi|433469942|ref|ZP_20427350.1| shikimate kinase family protein [Neisseria meningitidis 98080]
gi|433474128|ref|ZP_20431484.1| shikimate kinase family protein [Neisseria meningitidis 97021]
gi|433481503|ref|ZP_20438770.1| shikimate kinase family protein [Neisseria meningitidis 2006087]
gi|433484565|ref|ZP_20441784.1| shikimate kinase family protein [Neisseria meningitidis 2002038]
gi|433485552|ref|ZP_20442755.1| shikimate kinase family protein [Neisseria meningitidis 97014]
gi|433493165|ref|ZP_20450251.1| shikimate kinase family protein [Neisseria meningitidis NM586]
gi|433495249|ref|ZP_20452311.1| shikimate kinase family protein [Neisseria meningitidis NM762]
gi|433497381|ref|ZP_20454410.1| shikimate kinase family protein [Neisseria meningitidis M7089]
gi|433497967|ref|ZP_20454983.1| shikimate kinase family protein [Neisseria meningitidis M7124]
gi|433501469|ref|ZP_20458450.1| shikimate kinase family protein [Neisseria meningitidis NM174]
gi|433503547|ref|ZP_20460503.1| shikimate kinase family protein [Neisseria meningitidis NM126]
gi|304337651|gb|EFM03807.1| shikimate kinase [Neisseria meningitidis ATCC 13091]
gi|325127560|gb|EGC50483.1| shikimate kinase [Neisseria meningitidis N1568]
gi|325131460|gb|EGC54167.1| shikimate kinase [Neisseria meningitidis M6190]
gi|325137567|gb|EGC60148.1| shikimate kinase [Neisseria meningitidis ES14902]
gi|325141615|gb|EGC64077.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|325141648|gb|EGC64109.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|325141681|gb|EGC64141.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|325197686|gb|ADY93142.1| shikimate kinase [Neisseria meningitidis G2136]
gi|393292597|emb|CCI72115.1| Shikimate kinase [Neisseria meningitidis alpha704]
gi|402315900|gb|EJU51454.1| shikimate kinase [Neisseria meningitidis 93004]
gi|402321534|gb|EJU57007.1| shikimate kinase [Neisseria meningitidis NM183]
gi|402328284|gb|EJU63661.1| shikimate kinase [Neisseria meningitidis NM576]
gi|402342085|gb|EJU77254.1| shikimate kinase [Neisseria meningitidis NM2795]
gi|432201408|gb|ELK57489.1| shikimate kinase family protein [Neisseria meningitidis 87255]
gi|432201535|gb|ELK57615.1| shikimate kinase family protein [Neisseria meningitidis 98080]
gi|432208007|gb|ELK63989.1| shikimate kinase family protein [Neisseria meningitidis 97021]
gi|432218260|gb|ELK74123.1| shikimate kinase family protein [Neisseria meningitidis 2006087]
gi|432219651|gb|ELK75487.1| shikimate kinase family protein [Neisseria meningitidis 2002038]
gi|432224041|gb|ELK79814.1| shikimate kinase family protein [Neisseria meningitidis 97014]
gi|432226768|gb|ELK82491.1| shikimate kinase family protein [Neisseria meningitidis NM586]
gi|432228573|gb|ELK84272.1| shikimate kinase family protein [Neisseria meningitidis NM762]
gi|432232251|gb|ELK87899.1| shikimate kinase family protein [Neisseria meningitidis M7089]
gi|432233310|gb|ELK88938.1| shikimate kinase family protein [Neisseria meningitidis NM174]
gi|432236734|gb|ELK92338.1| shikimate kinase family protein [Neisseria meningitidis M7124]
gi|432239017|gb|ELK94577.1| shikimate kinase family protein [Neisseria meningitidis NM126]
Length = 170
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+G+MG+GKTT+G ++ LDY F DSD + G + IF+ GE FR E+
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAA-AAGVPIPTIFEMEGEQGFRSRETA 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+KL ++P V++TGGGAV++ N +R+ G V+L+ P + L R +S PLL
Sbjct: 67 ILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPEILLERTRC--DNSRPLL 124
Query: 216 DYDSADSYTKAFTALSALSKERSEAY-ANADATVSLLN 252
AD K L L R Y AD TV N
Sbjct: 125 QV--ADPLAK----LRELYAARDPVYRQTADFTVESAN 156
>gi|424897269|ref|ZP_18320843.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393181496|gb|EJC81535.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 196
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 10/160 (6%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L + L LVG+MG+GK+ VG I++ L F DSD +E++ ++A++F GE
Sbjct: 18 AALGSRNLILVGLMGAGKSAVGRIVASQLGIPFIDSDHEIERV-SRMTIAELFAAYGEEE 76
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVG 208
FR E++ +++L +VV+TGGGA + R +R+ G++V+L LD L R+
Sbjct: 77 FRALETRVMKRLLKGGPRVVSTGGGAFINERTRRHIRKGGVSVWLKADLDVLWERVNK-- 134
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
D+ PLL ++ L L R YA AD TV
Sbjct: 135 RDTRPLLKTENPKQ------TLEGLMNARYPIYAQADLTV 168
>gi|225376101|ref|ZP_03753322.1| hypothetical protein ROSEINA2194_01738 [Roseburia inulinivorans DSM
16841]
gi|225212121|gb|EEG94475.1| hypothetical protein ROSEINA2194_01738 [Roseburia inulinivorans DSM
16841]
Length = 269
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 93/175 (53%), Gaps = 13/175 (7%)
Query: 78 KWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKY-VEKLMGGT 136
K+++K R A L +FL+G MG+GK+T+ L D L+ + D+ VEK G
Sbjct: 74 KYIMKNSRRIQAKSLFDYNIFLIGFMGAGKSTIAGELKDKLEMDRVEMDQMIVEK--QGM 131
Query: 137 SVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNV 195
S+++IF E GEAYFR ES L +L Q +V+ GGG V+R N M++ G V L
Sbjct: 132 SISEIFDEYGEAYFRNLESNTLIELQKRKQTIVSCGGGVVMREENTDHMKKNGRVVLLTA 191
Query: 196 PLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAY-ANADATVS 249
+ + R+ +D P+L+ D F +S+L +R E Y A AD TV+
Sbjct: 192 KPETIYERVK--DSDERPILN----DHMNVEF--ISSLMDKRKERYEAVADITVA 238
>gi|422873292|ref|ZP_16919777.1| shikimate kinase [Clostridium perfringens F262]
gi|380305677|gb|EIA17954.1| shikimate kinase [Clostridium perfringens F262]
Length = 167
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GM GSGKTT+G LS L F D D+++E+ G + ++F + E FR+ ESK
Sbjct: 6 VLLIGMPGSGKTTIGRELSKVLKMNFLDMDEFIER-STGKEIKELFAQE-EEVFRDLESK 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
+ + LS + V+++GGG V R N ++ ITVF+N PLD + + + T+ PLL
Sbjct: 64 SCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLI---MEDIDTEGRPLL- 119
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADAT 247
+D + T + L K+ S+ D T
Sbjct: 120 WDGKERLTNLYRDRIDLYKKHSDIEIINDGT 150
>gi|118445057|ref|YP_879086.1| shikimate kinase [Clostridium novyi NT]
gi|118135513|gb|ABK62557.1| shikimate kinase [Clostridium novyi NT]
Length = 164
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 91/163 (55%), Gaps = 15/163 (9%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GM G GKTT+G+ LS+ L F D D+Y+ G S+ +IF E+GE +FR+ ESK
Sbjct: 8 IVLIGMPGCGKTTIGKKLSEILKCDFCDVDEYIVN-STGKSINEIF-ENGEEFFRDIESK 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+++++S +V++TGGGA+ R N +++ G F+N P++ + + V S PLL
Sbjct: 66 SIKEVSSCIPKVISTGGGAIKRKQNIDSLKEKGTIFFINRPIEDIC---SDVDVKSRPLL 122
Query: 216 DYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACI 257
D K + L +ER + Y N D + ++ CI
Sbjct: 123 ----KDGVGKIY----KLYEERYDLYKNYCDYEIINTDIDKCI 157
>gi|154493503|ref|ZP_02032823.1| hypothetical protein PARMER_02842 [Parabacteroides merdae ATCC
43184]
gi|423346743|ref|ZP_17324431.1| shikimate kinase [Parabacteroides merdae CL03T12C32]
gi|423723284|ref|ZP_17697437.1| shikimate kinase [Parabacteroides merdae CL09T00C40]
gi|154086713|gb|EDN85758.1| shikimate kinase [Parabacteroides merdae ATCC 43184]
gi|409219894|gb|EKN12854.1| shikimate kinase [Parabacteroides merdae CL03T12C32]
gi|409241709|gb|EKN34477.1| shikimate kinase [Parabacteroides merdae CL09T00C40]
Length = 173
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 82/141 (58%), Gaps = 4/141 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G MG+GKTTVG++LS L +F D D Y+E T V Q+F E GE FR+ E +
Sbjct: 4 IFLIGYMGAGKTTVGKVLSRQLGLSFIDLDHYIEGRYHKT-VGQLFAEKGEDAFRDIERR 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
L++++ +V+TGGGA N FM G TV+L V ++ LA+R+ + + P+L
Sbjct: 63 MLREVAAFEDVLVSTGGGAPCFFDNMEFMNGAGQTVYLKVSVEELAKRLELCKS-TRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKE 236
S D KAF A S +E
Sbjct: 122 KGRSGDE-LKAFIAESLEKRE 141
>gi|59800554|ref|YP_207266.1| shikimate kinase [Neisseria gonorrhoeae FA 1090]
gi|240013408|ref|ZP_04720321.1| shikimate kinase [Neisseria gonorrhoeae DGI18]
gi|240015849|ref|ZP_04722389.1| shikimate kinase [Neisseria gonorrhoeae FA6140]
gi|240120478|ref|ZP_04733440.1| shikimate kinase [Neisseria gonorrhoeae PID24-1]
gi|254493003|ref|ZP_05106174.1| shikimate kinase [Neisseria gonorrhoeae 1291]
gi|75432610|sp|Q5FAD3.1|AROK_NEIG1 RecName: Full=Shikimate kinase; Short=SK
gi|59717449|gb|AAW88854.1| putative shikimate kinase [Neisseria gonorrhoeae FA 1090]
gi|226512043|gb|EEH61388.1| shikimate kinase [Neisseria gonorrhoeae 1291]
Length = 170
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+G+MG+GKTT+G ++ LDY F DSD + G + IF+ GE FR E+
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAA-AAGVPIPTIFEMEGEQGFRSRETA 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+KL ++P V++TGGGAV++ N +R+ G V+L+ P + L R +S PLL
Sbjct: 67 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLL 124
Query: 216 DYDSADSYTKAFTALSALSKERSEAY-ANADATVSLLN 252
AD K L L R Y AD TV N
Sbjct: 125 QV--ADPLAK----LRELYAARDPVYRQTADFTVESAN 156
>gi|398835888|ref|ZP_10593241.1| 3-dehydroquinate synthase [Herbaspirillum sp. YR522]
gi|398214643|gb|EJN01218.1| 3-dehydroquinate synthase [Herbaspirillum sp. YR522]
Length = 568
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+FLVG+MGSGKTT+G L+ L+ F DSD +E G S+ IF+ GE FR E+
Sbjct: 4 SIFLVGLMGSGKTTIGRALAKKLNKRFIDSDHEIEARTG-ASIPVIFEIEGEESFRRREA 62
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITV-FLNVPLDALARRIAAVGTD-SFP 213
+ +++LS P V+ATGGGA++ P + +++G TV +L ++ + +R G D + P
Sbjct: 63 EVIRELSAQPDIVLATGGGAILHPDSRAHLKKGGTVIYLRASINQILQR---TGRDKNRP 119
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAY 241
LL +AD K L LS++R Y
Sbjct: 120 LL--QTADPRRK----LEELSRQREPLY 141
>gi|381204727|ref|ZP_09911798.1| shikimate kinase [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 164
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 84/154 (54%), Gaps = 10/154 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKTTVG L++ L Y F D+D+ +EK G T + +IF+ +GEA FR+ E+K
Sbjct: 3 IILIGFMGAGKTTVGRKLANRLGYFFLDTDQQIEKQQGCT-IEEIFRYAGEATFRDLETK 61
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+ L V +++TGGG +R N ++ G TV+L V L +R+ + PLL
Sbjct: 62 LLENLQSVRNTILSTGGGMFIRSKNQELLKDIGKTVYLQVDRGTLEQRLQC--DLNRPLL 119
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVS 249
+ ++ + + R Y AD T+
Sbjct: 120 QQPNWQK------NVNQMLQHREPIYLTADLTIK 147
>gi|194097716|ref|YP_002000757.1| shikimate kinase [Neisseria gonorrhoeae NCCP11945]
gi|268594081|ref|ZP_06128248.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Neisseria
gonorrhoeae 35/02]
gi|268596133|ref|ZP_06130300.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Neisseria
gonorrhoeae FA19]
gi|268598257|ref|ZP_06132424.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae MS11]
gi|268600606|ref|ZP_06134773.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID18]
gi|268602795|ref|ZP_06136962.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID1]
gi|268681390|ref|ZP_06148252.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID332]
gi|268683557|ref|ZP_06150419.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae SK-92-679]
gi|268685859|ref|ZP_06152721.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae SK-93-1035]
gi|293397708|ref|ZP_06641914.1| shikimate kinase [Neisseria gonorrhoeae F62]
gi|193933006|gb|ACF28830.1| AroK [Neisseria gonorrhoeae NCCP11945]
gi|268547470|gb|EEZ42888.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Neisseria
gonorrhoeae 35/02]
gi|268549921|gb|EEZ44940.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Neisseria
gonorrhoeae FA19]
gi|268582388|gb|EEZ47064.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae MS11]
gi|268584737|gb|EEZ49413.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID18]
gi|268586926|gb|EEZ51602.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID1]
gi|268621674|gb|EEZ54074.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID332]
gi|268623841|gb|EEZ56241.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae SK-92-679]
gi|268626143|gb|EEZ58543.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae SK-93-1035]
gi|291611654|gb|EFF40723.1| shikimate kinase [Neisseria gonorrhoeae F62]
Length = 171
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+G+MG+GKTT+G ++ LDY F DSD + G + IF+ GE FR E+
Sbjct: 9 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAA-AAGVPIPTIFEMEGEQGFRSRETA 67
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+KL ++P V++TGGGAV++ N +R+ G V+L+ P + L R +S PLL
Sbjct: 68 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLL 125
Query: 216 DYDSADSYTKAFTALSALSKERSEAY-ANADATVSLLN 252
AD K L L R Y AD TV N
Sbjct: 126 QV--ADPLAK----LRELYAARDPVYRQTADFTVESAN 157
>gi|148263876|ref|YP_001230582.1| shikimate kinase [Geobacter uraniireducens Rf4]
gi|146397376|gb|ABQ26009.1| shikimate kinase [Geobacter uraniireducens Rf4]
Length = 169
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 84/153 (54%), Gaps = 10/153 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GK++VG+IL++ L F D D + G S+ +IF GE YFR E+
Sbjct: 4 VFLTGFMGTGKSSVGKILAERLGCQFIDLDALIVA-EAGMSIKEIFAAHGEPYFRALEAD 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+++L VV+TGGG V+ P N R MR+ G+ V L + A+ R+AA + PLL
Sbjct: 63 LVRRLISEKGAVVSTGGGVVIDPENRRLMRENGVVVNLTATVHAIRERLAA--DNERPLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
D +S K + L+ ER Y +AD +
Sbjct: 121 QDD--NSLEKIVSMLA----EREPFYRDADIRI 147
>gi|349686537|ref|ZP_08897679.1| shikimate kinase / 3-dehydroquinate synthase [Gluconacetobacter
oboediens 174Bp2]
Length = 577
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 74 SLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLM 133
LD + A+ R+ S G+ + LVG+MG+GKTT+G IL+ L F DSD+ +E+
Sbjct: 20 PLDLNAVGPARPRQAGS---GRTIVLVGLMGAGKTTIGRILAARLGVPFVDSDEEIER-A 75
Query: 134 GGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVF 192
G ++A +F + GE FR E +++L P V+ATGGGA + +R+ ++++
Sbjct: 76 AGCTIADLFHKYGEPEFRRGERLVIRRLLSGPPVVLATGGGAFMDSRTRASVREHAVSIW 135
Query: 193 LNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
L PL L +R+A PLL+ L+ L + R YA AD V
Sbjct: 136 LRCPLPVLVQRVA--DRTHRPLLN------AAPPHAVLADLMRLRHPVYAEADIIV 183
>gi|429735842|ref|ZP_19269765.1| shikimate kinase [Selenomonas sp. oral taxon 138 str. F0429]
gi|429156766|gb|EKX99387.1| shikimate kinase [Selenomonas sp. oral taxon 138 str. F0429]
Length = 173
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 85/154 (55%), Gaps = 9/154 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKT+VG +L+ L F D D+ +E+ G S+ +F+E GE YFR E
Sbjct: 4 VVLIGFMGTGKTSVGRLLAARLGCAFHDLDRKIEE-KHGMSIPAMFREHGEPYFRAREKD 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A+++ + V+ATGGG V N +RQ GI V L +D + +R +A G + P+L
Sbjct: 63 AVREAAGRTNLVIATGGGTVKDAENVAILRQNGILVALTADVDTILQRTSARG--ARPVL 120
Query: 216 DY-DSADSYTKAFTALSALSKERSEAYANADATV 248
D+ D+ D A+ L ER Y AD TV
Sbjct: 121 DHADAGDRR----AAVVQLLDERRSLYDGADITV 150
>gi|414175668|ref|ZP_11430072.1| shikimate kinase [Afipia broomeae ATCC 49717]
gi|410889497|gb|EKS37300.1| shikimate kinase [Afipia broomeae ATCC 49717]
Length = 207
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 9/164 (5%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
++ + L G+ + LVGMMGSGK+T+G L L F D+D +E G +V++IF + G
Sbjct: 17 DIVAALGGRSIVLVGMMGSGKSTIGRRLGARLHVPFLDADHEIEIAHAGMTVSEIFAQHG 76
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIA 205
E YFR+ E++ + +L V+ATGGGA +R R + + ++++L D + RR+
Sbjct: 77 EPYFRDGEARVIARLLETGPCVIATGGGAFMREETRRRIHDKAVSIWLQADGDIILRRVK 136
Query: 206 AVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
PLL +AD ++ L ERS Y AD ++
Sbjct: 137 RRA--DRPLL--QTADPAAT----IARLIGERSPFYQLADLAIA 172
>gi|386825349|ref|ZP_10112473.1| shikimate kinase II [Serratia plymuthica PRI-2C]
gi|386377692|gb|EIJ18505.1| shikimate kinase II [Serratia plymuthica PRI-2C]
Length = 174
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 70/118 (59%), Gaps = 3/118 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G+GKTTVG L+ AL Y F D+D ++++ SVA++ G FR E
Sbjct: 3 QTIFMVGARGAGKTTVGSALAQALGYQFTDTDLFMQQ-TAQMSVAEMVAHEGWLGFRHRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS 211
S ALQ ++ P VVATGGG ++ N RFMRQ G ++L P LA+R+ D+
Sbjct: 62 SIALQTVTQ-PSTVVATGGGVILAEENRRFMRQHGTVIYLRSPAGVLAQRLEEYPQDA 118
>gi|304438518|ref|ZP_07398458.1| shikimate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304368601|gb|EFM22286.1| shikimate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 173
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 9/154 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKT+VG +L+ L F D DK +E+ G + QIF + GE YFR E +
Sbjct: 4 IVLIGFMGTGKTSVGRLLAGRLGCAFHDLDKKIEEAC-GIPIPQIFAQYGEPYFRAREKE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A++ + V+ATGGG V N +R+ G+ V L +D + +R AA G + P+L
Sbjct: 63 AVRAAAARSGLVIATGGGTVKDAGNAAILRENGVLVALTADVDTILQRTAARG--ARPVL 120
Query: 216 D-YDSADSYTKAFTALSALSKERSEAYANADATV 248
D D+ D A+ L +ER YA AD TV
Sbjct: 121 DGADAGDRR----AAVVQLLEERRTLYAGADITV 150
>gi|254447343|ref|ZP_05060809.1| shikimate kinase [gamma proteobacterium HTCC5015]
gi|198262686|gb|EDY86965.1| shikimate kinase [gamma proteobacterium HTCC5015]
Length = 174
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 12/149 (8%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFLVG MG+GKTT+G +L+ L F DSD +E+ G ++ IF+ GE+ FR+ E
Sbjct: 3 QSLFLVGPMGAGKTTIGRLLAKQLGLCFVDSDHAIEEKT-GVNIPTIFEYEGESGFRQRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTD-SF 212
++ + +LS V+ATGGGAV P N + +G ++L V +D +R G D +
Sbjct: 62 AQIIDELSQQKNIVLATGGGAVTTPQNCTHLAARGTVIYLTVSVDEQIKR---AGKDKNR 118
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAY 241
PL+ D+ L+ +++ER Y
Sbjct: 119 PLMQSDNPRE------TLTHMARERGPLY 141
>gi|313204310|ref|YP_004042967.1| shikimate kinase [Paludibacter propionicigenes WB4]
gi|312443626|gb|ADQ79982.1| shikimate kinase [Paludibacter propionicigenes WB4]
Length = 170
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G MGSGKTT+G+++++ L Y F D D Y+E T ++QIF E GE FR E +
Sbjct: 4 VFLIGYMGSGKTTIGKLVAEKLGYGFVDMDVYIENKYFNT-ISQIFAELGEEQFRLMEQR 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
L ++S +++TGGGA N +M+ +G+T++L + LA R+ + + PL+
Sbjct: 63 CLHEVSEFEDVIISTGGGAPCFFDNMEYMKSKGLTIYLKLTAAELAERLESSQANKRPLI 122
Query: 216 DYDSAD 221
S D
Sbjct: 123 AGRSGD 128
>gi|91200496|emb|CAJ73544.1| similar to shikimate kinase I [Candidatus Kuenenia stuttgartiensis]
Length = 187
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G G+GKT+VG+IL+ L+ + D+D+Y+E+ G T + IF+E E FRE ES
Sbjct: 3 IFLIGFRGTGKTSVGKILAQRLNRKYIDADEYLEQKEGKT-IKDIFEECDEGKFREIESD 61
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
+ +L L V+ATGGG V++ N + M++ G+ + L D L +RI
Sbjct: 62 VIAELCLQNNTVIATGGGVVIKEENVKRMKKCGVAILLEADADTLYKRI 110
>gi|90422056|ref|YP_530426.1| shikimate kinase [Rhodopseudomonas palustris BisB18]
gi|90104070|gb|ABD86107.1| shikimate kinase [Rhodopseudomonas palustris BisB18]
Length = 206
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 89/170 (52%), Gaps = 10/170 (5%)
Query: 81 LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQ 140
L A E+ + L + + LVGMMG+GK+TVG L+ L F D+D +E G ++A+
Sbjct: 11 LTAAEAEIVAALGRRPIVLVGMMGAGKSTVGRRLATRLHLPFVDADTEIEA-AAGMTIAE 69
Query: 141 IFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVR-PLNWRFMRQGITVFLNVPLDA 199
IF GE YFR+ E++ + +L V+ATGGGA +R R Q ++++L+ D
Sbjct: 70 IFANHGEPYFRDGEARVIARLLDNGPHVLATGGGAFMRDDTRLRIAAQAVSLWLHAEADV 129
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
+ RRI PLL +AD + L ER Y +AD T++
Sbjct: 130 ILRRIKRRA--DRPLL--KTADPAAT----IDRLIAERYPVYQSADLTIA 171
>gi|333896999|ref|YP_004470873.1| shikimate kinase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112264|gb|AEF17201.1| Shikimate kinase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 171
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 10/157 (6%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L G M +GKT VG+ ++D L + F D+D +EK+ G + +IF + GE YFR E A+
Sbjct: 6 LTGFMATGKTVVGKRVADILSFGFIDTDDLIEKI-SGMKITEIFDKYGEKYFRGIEKIAV 64
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLLDY 217
+ S + V++TGGG V+ P N +R+ G+ + L + + R I D P+L
Sbjct: 65 ARASRLKNHVISTGGGVVLNPSNIVQLRKHGVVICLKANPEVILRNIG--NNDKRPIL-- 120
Query: 218 DSADSYTKAFTALSALSKERSEAYANADATVSLLNLA 254
+ D Y K + AL ER Y AD T+ + +++
Sbjct: 121 ANGDVYEK----IKALLAERQHYYEFADYTIDVSDMS 153
>gi|435853275|ref|YP_007314594.1| shikimate kinase [Halobacteroides halobius DSM 5150]
gi|433669686|gb|AGB40501.1| shikimate kinase [Halobacteroides halobius DSM 5150]
Length = 170
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 81/144 (56%), Gaps = 10/144 (6%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+G MG+GKTTVG+ L+ L+Y F D D+ + G + +IF ++GE YFR+ E++
Sbjct: 5 LIGFMGTGKTTVGKKLASRLNYKFVDLDQEI-VAEDGREICEIFAQAGEDYFRDLETRVT 63
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLLDY 217
K++ +QV+ATGGG V+R N + +++ G V L + + R + D PLLD
Sbjct: 64 AKIAQKDKQVIATGGGVVLREENIKNLKKNGFLVLLQATPEEILERTKS--DDDRPLLDV 121
Query: 218 DSADSYTKAFTALSALSKERSEAY 241
+ + + + +ER+E Y
Sbjct: 122 E------EPLAKIKKMLEERAEKY 139
>gi|262377050|ref|ZP_06070276.1| shikimate kinase [Acinetobacter lwoffii SH145]
gi|262308088|gb|EEY89225.1| shikimate kinase [Acinetobacter lwoffii SH145]
Length = 188
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G T + IF++ GE FR+ E+
Sbjct: 22 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKTGAT-IPWIFEKEGEQGFRDRETA 80
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+ L+ P V+ATGGGA+ + LN +++Q GI V+L P++ +R + PLL
Sbjct: 81 VINDLTSRPHLVLATGGGAITQTLNRDYLKQRGIVVYLYTPVEIQLQR--TYRDKNRPLL 138
Query: 216 DYDSADSYTKAFTAL 230
++ + + A+
Sbjct: 139 QVENPEQKLRDLLAV 153
>gi|347541427|ref|YP_004848853.1| shikimate kinase [Pseudogulbenkiania sp. NH8B]
gi|345644606|dbj|BAK78439.1| shikimate kinase [Pseudogulbenkiania sp. NH8B]
Length = 182
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 80/146 (54%), Gaps = 10/146 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
FLVG+MG+GKTTVG L+ TF DSD +E G VA IF+ GE FR+ ES
Sbjct: 8 FFLVGLMGAGKTTVGRALARKTGKTFYDSDHEIEA-KTGVKVATIFEIEGEQRFRDRESC 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
A+ +L ++ATGGGA++RP N + ++ G+ ++L +D L R + PLL
Sbjct: 67 AIAELVQRDNIILATGGGAILRPENRQLLKDNGVVIYLRANIDDLLARTQH--DRNRPLL 124
Query: 216 DYDSADSYTKAFTALSALSKERSEAY 241
+AD K L +L KER Y
Sbjct: 125 --QTADPKAK----LESLLKERDPLY 144
>gi|429123617|ref|ZP_19184150.1| shikimate kinase [Brachyspira hampsonii 30446]
gi|426280450|gb|EKV57464.1| shikimate kinase [Brachyspira hampsonii 30446]
Length = 177
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 13/150 (8%)
Query: 93 DGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFRE 152
+ + +F++G+ G GK+ + ++L++ L+Y D D ++E G T + IF +GE YFR
Sbjct: 8 NNKIIFIIGLPGCGKSALSKMLAEKLNYNLYDMDSFIENKEGRT-ITDIFANNGEDYFRN 66
Query: 153 YESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDS 211
ES+ L +LSL+ V++TGGG V+ N MR +G+T+F++ D + I
Sbjct: 67 IESEVLHELSLLSNAVISTGGGIVLSEKNRNIMRDKGLTIFVDRNPDIILENIDPAQR-- 124
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAY 241
PLL D L LSK+R Y
Sbjct: 125 -PLLAKDK--------NKLLELSKQRDSLY 145
>gi|407007632|gb|EKE23237.1| hypothetical protein ACD_6C00554G0003 [uncultured bacterium]
Length = 178
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G T + IF++ GE FR+ E+
Sbjct: 12 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKTGAT-IPWIFEKEGEQGFRDRETA 70
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+ L+ P V+ATGGGA+ + LN +++Q GI V+L P++ +R + PLL
Sbjct: 71 VINDLTSRPHLVLATGGGAITQALNRDYLKQRGIVVYLYTPVEIQLQR--TYRDKNRPLL 128
Query: 216 DYDSADSYTKAFTAL 230
++ + + A+
Sbjct: 129 QVENPEQKLRDLLAV 143
>gi|410657061|ref|YP_006909432.1| Shikimate kinase I [Dehalobacter sp. DCA]
gi|410660098|ref|YP_006912469.1| Shikimate kinase I [Dehalobacter sp. CF]
gi|409019416|gb|AFV01447.1| Shikimate kinase I [Dehalobacter sp. DCA]
gi|409022454|gb|AFV04484.1| Shikimate kinase I [Dehalobacter sp. CF]
Length = 179
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 11/155 (7%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q + L+G M +GK++VG++L+ L + F D+D +E+ M G + +IF++ GEA FR E
Sbjct: 10 QNIVLIGFMAAGKSSVGKLLARELRWGFMDTDSEIER-MTGLKIPEIFQKYGEARFRSEE 68
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+ + K+S V+ATGGG V+ P NW + G V+L VPL+ +R A P
Sbjct: 69 NLLVHKISGFTDTVIATGGGTVLDPENWNILHGLGKLVYLYVPLEIALQR--AKEHHDRP 126
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + K L ++R Y A TV
Sbjct: 127 LLSSSEPEQIEK-------LWRDREVIYRKAPITV 154
>gi|344996380|ref|YP_004798723.1| shikimate kinase [Caldicellulosiruptor lactoaceticus 6A]
gi|343964599|gb|AEM73746.1| Shikimate kinase [Caldicellulosiruptor lactoaceticus 6A]
Length = 172
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 86/156 (55%), Gaps = 10/156 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L G MGSGKTT+G+++++ LD D+D V K G T + +IF+ GE FRE E
Sbjct: 2 KNIVLTGFMGSGKTTIGKLIAEKLDIELIDTDSEVIKEFGMT-IDKIFEVHGEKKFREVE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQG-ITVFLNVPLDALARRIAAVGTDSFP 213
+K ++++S + V++TGGG V+ P N + +R+ + FL +++ +R+ D+ P
Sbjct: 61 TKVIERVSKLENVVISTGGGVVLNPENVKLLRENSVIYFLYASAESILKRLK--DDDTRP 118
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL S D + L+ R Y N D ++
Sbjct: 119 LL--KSGDKLSNIIKLLNM----RMPFYKNCDFEIN 148
>gi|253990690|ref|YP_003042046.1| Shikimate kinase 2 [Photorhabdus asymbiotica]
gi|253782140|emb|CAQ85304.1| Shikimate kinase 2 [Photorhabdus asymbiotica]
Length = 174
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
LF+VG G+GKTTVG++L++ L YTF D+D ++++ ++A I G FR+ ES+
Sbjct: 5 LFIVGARGAGKTTVGKLLANELSYTFIDTDHHIQQ-TSNMTIADIVNRQGWQQFRQLESQ 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
ALQ++S +V++TGGG ++ N ++M+Q G+ ++L D LA R+
Sbjct: 64 ALQQVSQ-KNRVISTGGGIILSAENRQYMQQNGMVIYLQASADILAERL 111
>gi|403378941|ref|ZP_10920998.1| shikimate kinase [Paenibacillus sp. JC66]
Length = 168
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 11/159 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
++ + LVG MG+GK+TVG+ L++ L++TF D D+ +E + G S+ +F+E GE YFR
Sbjct: 1 MNKNNIVLVGFMGTGKSTVGKALAERLNWTFVDVDREIEAVE-GKSIPVLFREKGEEYFR 59
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTD 210
+ E + + ++ +Q+V+ GGGAV+R N R M G+ V L + R+
Sbjct: 60 QSEQEQIARVMQGSRQIVSMGGGAVLREANRRAMAASGLVVALTASASTILERVK--NDP 117
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
PLL + ++ L KER AY AD ++
Sbjct: 118 DRPLLAGNPEQK-------IAQLLKERKNAYQFADIHIN 149
>gi|114566079|ref|YP_753233.1| shikimate kinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337014|gb|ABI67862.1| shikimate kinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 168
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 9/160 (5%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G+ + L+G MG+GK++VG+ L++ L F D D+ +EK+ G S+ QIF++ GE FR
Sbjct: 2 GKNIVLIGFMGTGKSSVGQRLAEKLKMAFIDMDREIEKITG-LSINQIFRKHGEIRFRSE 60
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSF 212
E QKL V+ATGGG V+R N +R+ GI + L + + +R+ S
Sbjct: 61 EKLLAQKLGHESNLVIATGGGVVLRQENIEALRENGILICLEASPEEILKRVKR-KKASR 119
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
PL+ + + K A+ +ER YA D ++ N
Sbjct: 120 PLIKKEYGEEEIK------AMLEEREAFYACTDFRINTNN 153
>gi|381210339|ref|ZP_09917410.1| shikimate kinase [Lentibacillus sp. Grbi]
Length = 163
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 17/172 (9%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+L+G MGSGK+TVG +L + L ++ D+D+ V + G +A IF++ GE FR+YE
Sbjct: 2 QTLYLIGFMGSGKSTVGRLLHEKLGGSYHDTDQMVVEKYG--EIAAIFEQKGENQFRDYE 59
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSF- 212
++ L K + VV+TGGG + R N FM++ G+ ++L+ D + R+ G D
Sbjct: 60 TEML-KETASENFVVSTGGGIIERKENGEFMKKNGLIIYLDTSFDEIGDRL---GNDPVR 115
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACIGLKDVL 263
PL + K + L K R++ YA AD TV+ + I ++++L
Sbjct: 116 PL--------WRKNDSEKQQLYKRRNKLYAGLADITVTTDQKSPYIVVEEIL 159
>gi|387929702|ref|ZP_10132379.1| shikimate kinase [Bacillus methanolicus PB1]
gi|387586520|gb|EIJ78844.1| shikimate kinase [Bacillus methanolicus PB1]
Length = 167
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 88/156 (56%), Gaps = 13/156 (8%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ ++L+G MGSGKTTVG+ ++ D+D+ + K + S+ QIF+E+GE YFR E
Sbjct: 2 KSIYLIGFMGSGKTTVGKSFGVKWNWPVIDTDEEIVKKV-NKSINQIFEENGEDYFRHLE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
++ L++L V + ++ TGGG V++ N R+M++ GI VFL + + +RI DS P
Sbjct: 61 TEILKQLP-VNRSIITTGGGIVLKDENRRWMKENGIVVFLYAEPEEIFKRIE--NDDSRP 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYAN-ADATV 248
LL T A+ L + R Y AD T+
Sbjct: 118 LLK-------TNKKAAIEELLRSRLPLYIEAADFTI 146
>gi|389876203|ref|YP_006369768.1| 3-dehydroquinate synthase [Tistrella mobilis KA081020-065]
gi|388526987|gb|AFK52184.1| 3-dehydroquinate synthase [Tistrella mobilis KA081020-065]
Length = 184
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVG+MG GK++VG L+ L F D+D +EK G V +IF+ GEA FR E
Sbjct: 4 RPIVLVGLMGVGKSSVGRRLAQRLGIDFVDADTEIEK-AAGLPVPEIFRLYGEAEFRRGE 62
Query: 155 SKALQKLSLVPQQVVATGGGAVVRP-LNWRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
+ L +L +V+ATGGGA + P R GI+V+L L +ARR+ + P
Sbjct: 63 RRVLARLLEERPRVIATGGGAFMDPETRAAIARDGISVWLKAELPVIARRVLK-RRHTRP 121
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
L+ + A L L +ER YA AD TV
Sbjct: 122 LI------AEGDAMATLERLIRERHPVYAEADLTVE 151
>gi|261401671|ref|ZP_05987796.1| shikimate kinase [Neisseria lactamica ATCC 23970]
gi|269208255|gb|EEZ74710.1| shikimate kinase [Neisseria lactamica ATCC 23970]
Length = 170
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+G+MG+GKTT+G ++ LDY F DSD + G + IF+ GE FR E+
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAA-AAGVPIPTIFEMEGEQGFRSRETA 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+KL ++P V++TGGGAV++ N +R+ G V+L+ P + L R +S PLL
Sbjct: 67 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLL 124
Query: 216 DYDSADSYTKAFTALSALSKERSEAY-ANADATVSLLN 252
AD K L L R Y AD TV N
Sbjct: 125 QV--ADPLGK----LRELYAARDPVYRQTADFTVESAN 156
>gi|340778412|ref|ZP_08698355.1| shikimate kinase [Acetobacter aceti NBRC 14818]
Length = 588
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ + L+G+MG+GK+T+G L+ L F D+D +E+ G S+ +F+ GE FR
Sbjct: 33 LCGRSILLIGLMGAGKSTIGRRLAQRLGLGFVDADAEIER-AAGCSINDVFRLYGEEAFR 91
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTD 210
+ E + L++L P +V+ATGGGA + +R+ I+V+L PL L +R++ G
Sbjct: 92 DGERRVLKRLIDGPSRVIATGGGAFMNEQTRALIRERAISVWLRCPLHVLLKRVS--GRT 149
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
PLL+ K L L R YA AD V
Sbjct: 150 HRPLLN------GPKPRDVLERLMIIRHPVYAEADIIV 181
>gi|242240338|ref|YP_002988519.1| shikimate kinase [Dickeya dadantii Ech703]
gi|242132395|gb|ACS86697.1| Shikimate kinase [Dickeya dadantii Ech703]
Length = 173
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G GKTTVG L+ AL Y F D+D ++++ G +VA + G FR E
Sbjct: 3 QPIFMVGARGCGKTTVGGKLAQALGYEFVDTDIFMQE-TSGMTVADVVTSEGWPGFRRRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
S+ALQ++S P +V+ATGGG V+ N RFM +G ++L P+ LA R+ A
Sbjct: 62 SEALQRVSR-PNRVIATGGGMVLLEQNRRFMHDEGTVIYLLAPVAELAHRLEA 113
>gi|238925182|ref|YP_002938699.1| chorismate mutase [Eubacterium rectale ATCC 33656]
gi|238876858|gb|ACR76565.1| chorismate mutase [Eubacterium rectale ATCC 33656]
gi|291525832|emb|CBK91419.1| Shikimate kinase [Eubacterium rectale DSM 17629]
gi|291527440|emb|CBK93026.1| Shikimate kinase [Eubacterium rectale M104/1]
Length = 267
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 92/174 (52%), Gaps = 11/174 (6%)
Query: 78 KWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTS 137
K+++K R A L +FL+G MG+GK+TV L D L+ + D+ + + G S
Sbjct: 74 KYIMKNSRRIQAKSLFDYNIFLIGFMGAGKSTVAGELKDKLEMDRVEMDQMIVE-NRGMS 132
Query: 138 VAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVP 196
+++IF E GEAYFR ES L +L Q +V+ GGG V+R N M++ G V L
Sbjct: 133 ISEIFDEFGEAYFRNLESNTLIELQKRKQTIVSCGGGVVMREENADHMKKNGRVVLLTAK 192
Query: 197 LDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAY-ANADATVS 249
+ + R+ +D P+L+ + Y +S L ++R E Y A AD TV+
Sbjct: 193 PETIYERVK--DSDERPILNGNMNVEY------ISGLMEKRKERYEAVADVTVA 238
>gi|58040219|ref|YP_192183.1| bifunctional shikimate kinase [Gluconobacter oxydans 621H]
gi|58002633|gb|AAW61527.1| Bifunctional shikimate kinase [Gluconobacter oxydans 621H]
Length = 563
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVGMMG+GKTT+G L+ F D+D +E+ G S+ +IF GEA FR+ E
Sbjct: 24 RTVVLVGMMGAGKTTIGRRLAQICGLPFVDADIEIER-AAGCSIPEIFARHGEASFRDGE 82
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+ +Q+L P ++ATGGGA + +R+ ++V+L P+ L +R+A G P
Sbjct: 83 RRVIQRLLDGPPCILATGGGAWMDAQTRHLVRRHAVSVWLRAPVHVLVKRVA--GRAGRP 140
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL D + L R YA AD +
Sbjct: 141 LLAQGRPDEVLERLVGL------RYPVYAEADIII 169
>gi|389844643|ref|YP_006346723.1| 3-dehydroquinate synthase [Mesotoga prima MesG1.Ag.4.2]
gi|387859389|gb|AFK07480.1| 3-dehydroquinate synthetase [Mesotoga prima MesG1.Ag.4.2]
Length = 495
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 73/119 (61%), Gaps = 4/119 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+GMMGSGK+T+G ILS LD F D D +E+ G S+++IF++ GE FR E
Sbjct: 3 VFLIGMMGSGKSTIGRILSSVLDKKFIDMDSEIER-AKGMSISEIFEKEGEKEFRRLEKN 61
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
L++L + VV+TGGG ++ N + ++ +++L +P L RR++ G PLL
Sbjct: 62 LLKELVRSDEIVVSTGGGVILDNENRQTLKGENSIYLRLPPADLYRRVSVKGR---PLL 117
>gi|422110913|ref|ZP_16380768.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378401|emb|CBX22954.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 170
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+G+MG+GKTT+G ++ LDY F DSD + G + IF+ GE FR E+
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAA-AAGVPIPTIFEMEGERGFRSRETA 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+KL ++P V++TGGGAV++ N +R+ G V+L+ P + L R +S PLL
Sbjct: 67 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLL 124
Query: 216 DYDSADSYTKAFTALSALSKERSEAY-ANADATVSLLN 252
AD K L L R Y AD TV N
Sbjct: 125 QV--ADPLGK----LRELYAARDPVYRQTADFTVESAN 156
>gi|167040155|ref|YP_001663140.1| shikimate kinase [Thermoanaerobacter sp. X514]
gi|300914238|ref|ZP_07131554.1| Shikimate kinase [Thermoanaerobacter sp. X561]
gi|307724526|ref|YP_003904277.1| Shikimate kinase [Thermoanaerobacter sp. X513]
gi|238687552|sp|B0K0S9.1|AROK_THEPX RecName: Full=Shikimate kinase; Short=SK
gi|166854395|gb|ABY92804.1| Shikimate kinase [Thermoanaerobacter sp. X514]
gi|300889173|gb|EFK84319.1| Shikimate kinase [Thermoanaerobacter sp. X561]
gi|307581587|gb|ADN54986.1| Shikimate kinase [Thermoanaerobacter sp. X513]
Length = 171
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 90/179 (50%), Gaps = 20/179 (11%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L G M +GKTTVG+ ++ + + F D+DK +EK M +V+ IF++ GE YFR+ E
Sbjct: 4 IVLTGFMATGKTTVGKKVATTMSFGFIDTDKMIEK-MANMTVSDIFEKYGENYFRKLEKA 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
A++K + + V+ATGGG V+ P N +R+ V V + R D PLL
Sbjct: 63 AVKKAARLKNFVIATGGGVVLNPSNIVQLRKNGVVICFVARPEIILRNIGKNKDR-PLLM 121
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVL 275
D+ + + L KER Y AD T+ DV D+T +A EV+
Sbjct: 122 VDNPEE------KIRQLLKEREPFYRFADYTI------------DVSDMTIDEVAEEVI 162
>gi|389696013|ref|ZP_10183655.1| shikimate kinase [Microvirga sp. WSM3557]
gi|388584819|gb|EIM25114.1| shikimate kinase [Microvirga sp. WSM3557]
Length = 216
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
Query: 72 CDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEK 131
D + G+ +G V+ L + + LVG+MG+GK+TVG L+ AL F D+D +E
Sbjct: 16 LDEVGGQNQASQRGHPVSRLLGTRSIVLVGLMGAGKSTVGRRLAQALKLPFRDADHEIEA 75
Query: 132 LMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVV-RPLNWRFMRQGIT 190
G ++ +IF GE +FR+ E + + +L V+ATGGGA + R GI+
Sbjct: 76 -AAGMTIPEIFAIHGEEHFRDGERRVIARLLQDGPIVLATGGGAFMNEETRRRIAEHGIS 134
Query: 191 VFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
++L LD L RR+ T PLL + + L R YA AD T+
Sbjct: 135 LWLKADLDILMRRVRKRATR--PLLQNPDPEGTMRRLMEL------RYPVYATADITL 184
>gi|395767610|ref|ZP_10448143.1| shikimate kinase [Bartonella doshiae NCTC 12862]
gi|395413973|gb|EJF80426.1| shikimate kinase [Bartonella doshiae NCTC 12862]
Length = 205
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 10/163 (6%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
++ S LD + L LVG+MG+GK+ +G+ ++ L F DSD+ +EK ++ ++FK G
Sbjct: 17 QLLSSLDKRALVLVGLMGAGKSVIGKRVATMLHLPFYDSDQEIEK-AAQMTITELFKTYG 75
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIA 205
E+ FR E + + L V+ATGGGA + + + Q GI+++L V L+ L +R++
Sbjct: 76 ESEFRALEQRVILNLMKKSPLVLATGGGAYINENIQKAIHQNGISIWLKVDLNILMKRVS 135
Query: 206 AVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
T PLL ++ + L +R YA AD T+
Sbjct: 136 RRPTR--PLLQTENPQE------TMQRLMDQRHPIYAKADLTI 170
>gi|372268165|ref|ZP_09504213.1| shikimate kinase [Alteromonas sp. S89]
Length = 174
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GK+T+G++L+ L FADSDK +E G + IF GEA FR ES+
Sbjct: 6 IFLVGPMGAGKSTIGKLLAAQLGLPFADSDKVLEDRTG-ADIPWIFDVEGEAGFRRRESE 64
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
L+ L QV+ATGGG V++P N ++ G V+L LD L R
Sbjct: 65 VLRDLCNGEVQVIATGGGIVLKPENRELLKHGGFIVYLRASLDQLVER 112
>gi|116254086|ref|YP_769924.1| shikimate kinase [Rhizobium leguminosarum bv. viciae 3841]
gi|115258734|emb|CAK09840.1| putative shikimate kinase I [Rhizobium leguminosarum bv. viciae
3841]
Length = 185
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 19/192 (9%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L + L LVG+MG+GK++VG I++ L F DSD +E++ ++A++F GE
Sbjct: 7 AALGSRNLILVGLMGAGKSSVGRIVASQLAIPFIDSDLEIERV-SRMTIAELFAAYGEQE 65
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVG 208
FR E++ +++L +VV+TGGGA + + +R+ G++V+L LD L R+A
Sbjct: 66 FRALEARVIKRLLKSGPRVVSTGGGAFINDRTRKHIRKGGLSVWLKADLDVLWDRVAK-- 123
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPT 268
D+ PLL ++ L L R YA AD TV ++ I +VL
Sbjct: 124 RDTRPLLKTENPKQ------TLEGLMNARYPIYAQADLTVLSRDVRKEIMADEVL----- 172
Query: 269 TIAMEVLVQAQK 280
+ L++AQK
Sbjct: 173 ----KALIEAQK 180
>gi|300024675|ref|YP_003757286.1| 3-dehydroquinate synthase [Hyphomicrobium denitrificans ATCC 51888]
gi|299526496|gb|ADJ24965.1| 3-dehydroquinate synthase [Hyphomicrobium denitrificans ATCC 51888]
Length = 564
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 90/158 (56%), Gaps = 10/158 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L + + LVG+MG GK+++G+ L+ L F D+D+ +E+ T + +IF + GEA+FR
Sbjct: 14 LGKRSIVLVGLMGCGKSSIGKRLAARLGLPFIDADEEIERAAAKT-INEIFADHGEAHFR 72
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTD 210
+ E K + +L QV+ATGGGA + P + +R+ G++++L L L RR+ + D
Sbjct: 73 DGERKVISRLLSNGPQVLATGGGAYMHPETRQRIRENGVSIWLRADLPVLMRRV--MKRD 130
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
+ PLL + ++ + L + R YA AD TV
Sbjct: 131 TRPLLREGNPEA------TMRKLIEARYPIYAEADMTV 162
>gi|407786293|ref|ZP_11133439.1| shikimate kinase [Celeribacter baekdonensis B30]
gi|407202025|gb|EKE72021.1| shikimate kinase [Celeribacter baekdonensis B30]
Length = 182
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 84/155 (54%), Gaps = 10/155 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVGMMG+GKT VG+ ++ L F DSD +EK SVA+IF GEA+FR+ E
Sbjct: 7 KTVALVGMMGAGKTAVGKAMAARLSVPFLDSDAEIEK-AAAMSVAEIFSRDGEAFFRQRE 65
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFP 213
++ + +L Q V++TGGGA + +N + + G+ V+L L+ L R+ T P
Sbjct: 66 AEVIARLLETQQAVLSTGGGAFLAEVNRNIIAKNGVAVWLKADLNILWNRVRHKSTR--P 123
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL ++ + L +L K R YA A V
Sbjct: 124 LLRTEN------PYETLKSLVKAREPFYAKAGIIV 152
>gi|418053795|ref|ZP_12691851.1| Shikimate kinase [Hyphomicrobium denitrificans 1NES1]
gi|353211420|gb|EHB76820.1| Shikimate kinase [Hyphomicrobium denitrificans 1NES1]
Length = 564
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 90/158 (56%), Gaps = 10/158 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L + + LVG+MG GK+++G+ L+ L F D+D+ +E+ T + +IF + GEA+FR
Sbjct: 14 LGKRSIVLVGLMGCGKSSIGKRLAARLGLPFVDADEEIERAAAKT-INEIFTDHGEAHFR 72
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTD 210
+ E K + +L QV+ATGGGA + P + +R+ G++++L L L RR+ + D
Sbjct: 73 DGERKVISRLLNNGPQVLATGGGAYMHPETRQRIRENGVSIWLRADLPVLMRRV--MKRD 130
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
+ PLL + ++ + L + R YA AD TV
Sbjct: 131 TRPLLRDGNPEA------TMRKLIEARYPIYAEADMTV 162
>gi|288573792|ref|ZP_06392149.1| 3-dehydroquinate synthase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288569533|gb|EFC91090.1| 3-dehydroquinate synthase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 520
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 87/157 (55%), Gaps = 13/157 (8%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G+ +FL G MGSGKT+VG+ L++A+ F D DK +E L G SVA+IF GE FR
Sbjct: 4 GELVFLGGFMGSGKTSVGQRLAEAVGLPFVDLDKAIE-LRAGASVAEIFASQGEEGFRRL 62
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSF 212
E+++L+++S + + +VA GGGA+ P +R +G V L+ D + R+AA
Sbjct: 63 EAQSLREISDLERCIVALGGGALKDPKGRELIRKKGRLVILDASADTVKNRVAAQ-PGQR 121
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
PLL ++ L L ++R Y++ D V
Sbjct: 122 PLLKMEN----------LEDLWEKRRPLYSDGDLRVE 148
>gi|407780153|ref|ZP_11127399.1| shikimate kinase [Nitratireductor pacificus pht-3B]
gi|407298030|gb|EKF17176.1| shikimate kinase [Nitratireductor pacificus pht-3B]
Length = 207
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 10/162 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L + + VG+MG+GKT +G +++ L F DSD +E + +VA +F GEA FR
Sbjct: 19 LGARSVVFVGLMGAGKTVIGRRVAEMLGMPFVDSDHEIEAV-SRMTVADLFSAYGEAEFR 77
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTD 210
E + + +L +VV+TGGGA V P R + R+GI+V+L L L R+ T
Sbjct: 78 ALERRVIARLLKTGPRVVSTGGGAFVNPATRRAVGRRGISVWLKADLPTLVERVGRKTTR 137
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
L+D D A+ L+ L +ER YA AD + N
Sbjct: 138 PL-LVDNDPAE-------VLNRLMEERYPLYAEADTVIHSRN 171
>gi|409408007|ref|ZP_11256451.1| 3-dehydroquinate synthase/shikimate kinase [Herbaspirillum sp.
GW103]
gi|386432463|gb|EIJ45290.1| 3-dehydroquinate synthase/shikimate kinase [Herbaspirillum sp.
GW103]
Length = 599
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 12/147 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG+MG+GKTT+G L+ L+ F DSD +E G T + IF+ GE FR E++
Sbjct: 5 IFLVGLMGAGKTTIGRALAKKLNKRFVDSDHEIEARTGAT-IPVIFEIEGEENFRRREAE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGIT-VFLNVPLDALARRIAAVGTD-SFPL 214
+++L+ P V+ATGGGA++R N +++G T V+L ++ + +R G D + PL
Sbjct: 64 VIRELAAQPDIVLATGGGAILRAENRENLKKGGTVVYLRASINQILQR---TGRDKNRPL 120
Query: 215 LDYDSADSYTKAFTALSALSKERSEAY 241
L +AD K L LS++R Y
Sbjct: 121 L--QTADPRRK----LEELSRQRDPLY 141
>gi|296135154|ref|YP_003642396.1| shikimate kinase [Thiomonas intermedia K12]
gi|295795276|gb|ADG30066.1| Shikimate kinase [Thiomonas intermedia K12]
Length = 181
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
++L+G+MG+GKTTVG L+ L F DSD +E+ G ++ +F GEA FR+ E
Sbjct: 4 HSIYLIGLMGAGKTTVGRTLAQRLGLRFIDSDHEIEREQG-CPISTLFSRLGEAGFRDIE 62
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
++A+ L+ + V+ATGGGAV+RP N + + + G V+L D LA R+
Sbjct: 63 ARAIDALTQLEGIVLATGGGAVLRPENRKALHERGTVVYLRATPDDLAHRL 113
>gi|452126823|ref|ZP_21939406.1| shikimate kinase [Bordetella holmesii F627]
gi|452130196|ref|ZP_21942769.1| shikimate kinase [Bordetella holmesii H558]
gi|451921918|gb|EMD72063.1| shikimate kinase [Bordetella holmesii F627]
gi|451923056|gb|EMD73200.1| shikimate kinase [Bordetella holmesii H558]
Length = 211
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVGMMG+GKTT+G L+ AL F D D +E G V IF+ GEA FR+ ES
Sbjct: 42 IFLVGMMGAGKTTIGRGLARALGREFIDLDHELEARCG-VRVPVIFEIEGEAGFRKRESS 100
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
ALQ+ + ++ATGGGAV+ N R +RQ GI ++L +D L RR
Sbjct: 101 ALQECTQRRAIILATGGGAVLAEDNRRLLRQRGIVMYLRASVDELYRR 148
>gi|30249927|ref|NP_841997.1| shikimate kinase [Nitrosomonas europaea ATCC 19718]
gi|75540210|sp|Q82TC0.1|AROK_NITEU RecName: Full=Shikimate kinase; Short=SK
gi|30139034|emb|CAD85891.1| Shikimate kinase [Nitrosomonas europaea ATCC 19718]
Length = 211
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GMMGSGKTTVG++L++ + TF D D +++ G + IF+ GEA FR+ ES+
Sbjct: 29 IILIGMMGSGKTTVGKLLANLVGKTFIDIDHEIQRRTG-VGIPVIFEIEGEAGFRKRESE 87
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
L+ + V+ATGGGA++ P N +RQ G V+L P+ L RR
Sbjct: 88 VLRDIVRQQNIVLATGGGAILHPDNRALLRQHGTVVYLCAPVTELRRR 135
>gi|312127273|ref|YP_003992147.1| shikimate kinase [Caldicellulosiruptor hydrothermalis 108]
gi|311777292|gb|ADQ06778.1| Shikimate kinase [Caldicellulosiruptor hydrothermalis 108]
Length = 172
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 87/156 (55%), Gaps = 10/156 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L G MGSGKTT+G+++++ LD D+D V K G T + +IF+ GE FRE E
Sbjct: 2 KNIVLTGFMGSGKTTIGKLIAEKLDIELIDTDSEVIKEFGMT-IDKIFEVHGEKKFREVE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
++ ++++S + V++TGGG V+ P N + +R+ G+ FL +++ +R+ D+ P
Sbjct: 61 TRVIERVSKLENVVISTGGGVVLNPENVKLLRENGVIYFLYASAESILKRLK--DDDTRP 118
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL + D + L+ R Y N D ++
Sbjct: 119 LL--KNGDKLSNIIRLLNM----RMPFYKNCDFEIN 148
>gi|270263505|ref|ZP_06191774.1| shikimate kinase II [Serratia odorifera 4Rx13]
gi|333925824|ref|YP_004499403.1| shikimate kinase [Serratia sp. AS12]
gi|333930777|ref|YP_004504355.1| shikimate kinase [Serratia plymuthica AS9]
gi|386327648|ref|YP_006023818.1| shikimate kinase [Serratia sp. AS13]
gi|421781921|ref|ZP_16218381.1| shikimate kinase 2 [Serratia plymuthica A30]
gi|270042389|gb|EFA15484.1| shikimate kinase II [Serratia odorifera 4Rx13]
gi|333472384|gb|AEF44094.1| Shikimate kinase [Serratia plymuthica AS9]
gi|333489884|gb|AEF49046.1| Shikimate kinase [Serratia sp. AS12]
gi|333959981|gb|AEG26754.1| Shikimate kinase [Serratia sp. AS13]
gi|407755795|gb|EKF65918.1| shikimate kinase 2 [Serratia plymuthica A30]
Length = 174
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 70/118 (59%), Gaps = 3/118 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G+GKTTVG L+ + Y F D+D ++++ SVA++ G FR E
Sbjct: 3 QTIFMVGARGAGKTTVGSALAQTMGYHFTDTDLFMQQTT-QMSVAEMVAHEGWLGFRRRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS 211
S ALQ ++ P VVATGGG ++ N RFMRQ G ++L P D LA+R+ D+
Sbjct: 62 SIALQTVTQ-PSTVVATGGGMILAEENRRFMRQHGTVIYLRSPADVLAQRLEEYPQDA 118
>gi|452820465|gb|EME27507.1| shikimate kinase [Galdieria sulphuraria]
Length = 184
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVGMMGSGK+T+G+ L+ L Y+F D+D+ +E++ + QIF++ GE FRE ES
Sbjct: 82 IYLVGMMGSGKSTIGQCLASKLSYSFLDTDQVIEQVEQ-KKITQIFEQDGEDKFREVESN 140
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR 186
L ++ VVATGGG V+R NW +R
Sbjct: 141 ILNQIQPCLGYVVATGGGIVLRSSNWSILR 170
>gi|209883235|ref|YP_002287092.1| shikimate kinase [Oligotropha carboxidovorans OM5]
gi|337739671|ref|YP_004631399.1| shikimate kinase AroK [Oligotropha carboxidovorans OM5]
gi|386028689|ref|YP_005949464.1| shikimate kinase AroK [Oligotropha carboxidovorans OM4]
gi|209871431|gb|ACI91227.1| shikimate kinase [Oligotropha carboxidovorans OM5]
gi|336093757|gb|AEI01583.1| shikimate kinase AroK [Oligotropha carboxidovorans OM4]
gi|336097335|gb|AEI05158.1| shikimate kinase AroK [Oligotropha carboxidovorans OM5]
Length = 213
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Query: 67 ESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSD 126
E ++L + +++ + ++ + L + + LVGMMGSGK+TVG L+ L F D+D
Sbjct: 5 EPAEMPENLARQGVIQNQTADILAALGTRAIVLVGMMGSGKSTVGRRLAARLRLPFVDAD 64
Query: 127 KYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVR-PLNWRFM 185
+ +E GG ++ +IF GE YFRE E+K + L QV+ATGGGA VR R
Sbjct: 65 QEIETRHGGMTITEIFATHGEPYFREGEAKVISALLDGGAQVLATGGGAFVRDDTRERIR 124
Query: 186 RQGITVFLNVPLDALARRI 204
+ ++++L + RR+
Sbjct: 125 SKAVSIWLKADGATVLRRV 143
>gi|374579552|ref|ZP_09652646.1| shikimate kinase [Desulfosporosinus youngiae DSM 17734]
gi|374415634|gb|EHQ88069.1| shikimate kinase [Desulfosporosinus youngiae DSM 17734]
Length = 177
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 12/153 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GK+TVG+ L+ +L + F D+D + ++ SV++IF+ GE FR ES
Sbjct: 4 IVLIGFMGTGKSTVGKRLAQSLAWDFVDTDYEIGEVTS-MSVSEIFRRHGETRFRSEESI 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+ +LS + V+ATGGG V+ P NW + Q GI + L+ L+A+ RI + PLL
Sbjct: 63 VVTRLSQQERLVIATGGGTVLNPANWNALAQNGIVIALHASLEAILARIGH--KNDRPLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
+ L +R YA AD V
Sbjct: 121 --------KGPRDVIEKLWSDRQACYAQADYIV 145
>gi|300313470|ref|YP_003777562.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Herbaspirillum seropedicae SmR1]
gi|300076255|gb|ADJ65654.1| bifunctional enzyme: 3-dehydroquinate synthase/shikimate kinase
[Herbaspirillum seropedicae SmR1]
Length = 596
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 87/147 (59%), Gaps = 12/147 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG+MG+GKTT+G L+ L+ F DSD +E G T + IF+ GE FR E++
Sbjct: 5 IFLVGLMGAGKTTIGRALAKKLNKRFIDSDHEIEARTGAT-IPVIFEIEGEENFRRREAE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGIT-VFLNVPLDALARRIAAVGTD-SFPL 214
+++L+ +P V+ATGGGA++R N +++G T V+L ++ + +R G D + PL
Sbjct: 64 VIRELTALPDIVLATGGGAILRAENRDNLKKGGTVVYLRASINQILQR---TGRDKNRPL 120
Query: 215 LDYDSADSYTKAFTALSALSKERSEAY 241
L +AD K L LS++R Y
Sbjct: 121 L--QTADPRRK----LEELSRQRDPLY 141
>gi|219669553|ref|YP_002459988.1| shikimate kinase [Desulfitobacterium hafniense DCB-2]
gi|423073498|ref|ZP_17062237.1| shikimate kinase [Desulfitobacterium hafniense DP7]
gi|219539813|gb|ACL21552.1| Shikimate kinase [Desulfitobacterium hafniense DCB-2]
gi|361855576|gb|EHL07539.1| shikimate kinase [Desulfitobacterium hafniense DP7]
Length = 207
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 84 KGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFK 143
+G ++ + LVG MG+GK+TVG L+ L F D+D +E+L T V++IF+
Sbjct: 24 EGEGLSGAAHNDNIVLVGFMGTGKSTVGRRLAKLLGREFIDTDLEIERLTEMT-VSEIFR 82
Query: 144 ESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALAR 202
GE FR E +++L+ V+ATGGG V+ P NWR + Q G+ + L PLD + +
Sbjct: 83 RHGETRFRSEERLLVKRLAEHKGYVIATGGGTVLNPENWRDLAQSGVIIGLYAPLDEIYK 142
Query: 203 RIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
RI + PLL D + L +R Y A+ T+
Sbjct: 143 RIGY--RNDRPLLRGDRQ--------VVEELWAKRQPIYNQANWTI 178
>gi|150397763|ref|YP_001328230.1| shikimate kinase [Sinorhizobium medicae WSM419]
gi|150029278|gb|ABR61395.1| Shikimate kinase [Sinorhizobium medicae WSM419]
Length = 192
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 10/159 (6%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L + L +G+MG+GK+ +G + + AL F DSD +E++ +++ +F GE F
Sbjct: 19 ALGKRNLVFIGLMGAGKSAIGRLTAQALGVPFVDSDHEIERV-SRMTISDLFATYGEEEF 77
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGT 209
R E++ L++L +VV+TGGGA + + R + R G+TV+LN LD L R+
Sbjct: 78 RALEARVLKRLLRSGPRVVSTGGGAYINERSRRHIKRGGLTVWLNAELDVLWERVNK--R 135
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
D+ PLL ++ L L + R YA AD TV
Sbjct: 136 DTRPLLKTENPKQ------TLENLMRARYPIYAEADLTV 168
>gi|365104894|ref|ZP_09334286.1| shikimate kinase 2 [Citrobacter freundii 4_7_47CFAA]
gi|363643835|gb|EHL83139.1| shikimate kinase 2 [Citrobacter freundii 4_7_47CFAA]
Length = 181
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFLVG G GKTT G L+ A+D+ F D+D++++ + T VA+I + G FR E
Sbjct: 3 QPLFLVGPRGCGKTTTGMALAKAIDFQFVDTDRWLQSHVQMT-VAEIVEREGWEGFRAQE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
+ ALQ ++ P VVATGGG ++ N R+MR G+ ++L+ P+ L R+ A
Sbjct: 62 TTALQAVT-APATVVATGGGIILTEFNRRYMRSHGVVIYLSAPVSVLVDRLEA 113
>gi|378822560|ref|ZP_09845323.1| shikimate kinase [Sutterella parvirubra YIT 11816]
gi|378598633|gb|EHY31758.1| shikimate kinase [Sutterella parvirubra YIT 11816]
Length = 625
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 77/143 (53%), Gaps = 10/143 (6%)
Query: 72 CDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEK 131
C + D K + E A L + L+LVGM G GKTTVG +L +AL F D D +E+
Sbjct: 446 CSAYDAK---RCAAIEAAIRLGEENLWLVGMPGVGKTTVGGLLGEALGRPFVDLDAEIER 502
Query: 132 LMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITV 191
+ G + +IF+ GEA FRE E++A S V+ATGGG V+R N R MR+ TV
Sbjct: 503 V-AGMPIPEIFRTRGEAGFREIEAEAAMTASRGRGTVIATGGGTVLREANRRAMRESGTV 561
Query: 192 FLNVPLDALARRIAAVGTDSFPL 214
L R ++ + T+ PL
Sbjct: 562 VW------LQRDLSRLPTEGRPL 578
>gi|357134333|ref|XP_003568772.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 273
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 105/190 (55%), Gaps = 6/190 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+++VG + K + ++L++ + Y + SD +E ++GG FKES E + E E++
Sbjct: 79 IYVVGTDCAAKRNIAKLLANCIIYRYLCSDDLLEDVLGGKEALAAFKESDEKGYLEVETE 138
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLD-ALARRIAAVGTDSFPLL 215
L++L+ + V+ G GAV+ N +R G++++++VPL+ A+ + ++G +
Sbjct: 139 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSMGAKA---- 194
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVL 275
DS+++A L E E YA +D TVS+ N+A+ +G + ++ + ++++
Sbjct: 195 -TSDPDSFSQAMGKLRQRYDELKERYAVSDVTVSVQNVASQLGYGSIDSLSLEDVVLDIV 253
Query: 276 VQAQKYLNSK 285
+ +K + +K
Sbjct: 254 KKIEKLIRAK 263
>gi|395780531|ref|ZP_10460993.1| shikimate kinase [Bartonella washoensis 085-0475]
gi|423711872|ref|ZP_17686177.1| shikimate kinase [Bartonella washoensis Sb944nv]
gi|395412720|gb|EJF79200.1| shikimate kinase [Bartonella washoensis Sb944nv]
gi|395418877|gb|EJF85194.1| shikimate kinase [Bartonella washoensis 085-0475]
Length = 210
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 87/164 (53%), Gaps = 10/164 (6%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
++ S LD + L L+G+MG+GK+ +G+ ++ L F DSD+ +EK + ++FK G
Sbjct: 17 QLLSSLDKRALVLIGLMGAGKSVIGKRVATMLHLPFYDSDQEIEK-AAQMKITELFKVYG 75
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRP-LNWRFMRQGITVFLNVPLDALARRIA 205
E FR E + + L V+ATGGGA + + + GI+++L V LD L +R++
Sbjct: 76 EPEFRALERRVILNLLKKKPLVLATGGGAYINEDIRQAIHKNGISIWLKVDLDILMKRVS 135
Query: 206 AVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
T PLL + + L ++R YANA+ T++
Sbjct: 136 KHPTR--PLLQTANPKE------TMQKLMEQRYPIYANANLTIN 171
>gi|162147968|ref|YP_001602429.1| bifunctional protein: shikimate kinase and 3-dehydroquinate
synthase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542585|ref|YP_002274814.1| 3-dehydroquinate synthase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786545|emb|CAP56127.1| putative bifunctional protein: shikimate kinase and
3-dehydroquinate synthase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530262|gb|ACI50199.1| 3-dehydroquinate synthase [Gluconacetobacter diazotrophicus PAl 5]
Length = 591
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 10/155 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVG+MG+GKTT+G ++ L F D+D +E+ G S+A +F+ GEA FR+ E
Sbjct: 52 RSVVLVGLMGAGKTTIGRRIAARLGMPFVDADVEIER-AAGCSIADLFRRYGEAEFRKGE 110
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
+ ++++ V+ATGGGA + P+ +R + +V+L PL L RR+ G P
Sbjct: 111 HRVIRRILSGHPLVLATGGGAFMDPVTRAVIRDRATSVWLRCPLPVLVRRVQ--GRTHRP 168
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL+ + L+AL + R YA A+ TV
Sbjct: 169 LLNEGNPRDI------LAALMEIRHPVYAEANITV 197
>gi|255659655|ref|ZP_05405064.1| shikimate kinase [Mitsuokella multacida DSM 20544]
gi|260848217|gb|EEX68224.1| shikimate kinase [Mitsuokella multacida DSM 20544]
Length = 176
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKT+ G +L+ L F D D+ +E G ++ IF + GE YFR E +
Sbjct: 4 IVLIGFMGTGKTSTGRVLAQKLGAAFLDLDQEIEA-EEGMAIPAIFAQKGEPYFRAAEHR 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+++++ V++TGGG V P N +RQ G+ V L +D + R A+ G P+L
Sbjct: 63 MVERVAARQNAVISTGGGTVKDPANVALLRQSGVIVCLTADVDTILMRTASKG--ERPVL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVL 263
D + + A+ L +ER Y AD +V L+ ++++L
Sbjct: 121 DKEDKGDRRR---AVETLIEERRPLYRQADFSVDTSRLSPLQVVEEIL 165
>gi|445064351|ref|ZP_21376419.1| shikimate kinase [Brachyspira hampsonii 30599]
gi|444504268|gb|ELV04962.1| shikimate kinase [Brachyspira hampsonii 30599]
Length = 177
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 13/150 (8%)
Query: 93 DGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFRE 152
+ + +F++G+ G GK+ + ++L+ L+Y F D D ++E G T + +IF +GE YFR
Sbjct: 8 NSKIIFIIGLPGCGKSALSKMLAKKLNYQFYDMDSFIEDKEGST-ITEIFANNGETYFRN 66
Query: 153 YESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDS 211
ES LQ+LS + V++TGGG V+ N M+ +G+T+F++ D + + +
Sbjct: 67 LESDVLQELSSLSNAVISTGGGIVLSEKNRNIMKDKGLTIFVDRNPDII---LENIDPSQ 123
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAY 241
PLL D L LSK+R Y
Sbjct: 124 RPLLAKDK--------NKLLELSKQRDRLY 145
>gi|378578041|ref|ZP_09826721.1| shikimate kinase III [Pantoea stewartii subsp. stewartii DC283]
gi|377819150|gb|EHU02230.1| shikimate kinase III [Pantoea stewartii subsp. stewartii DC283]
Length = 174
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G G GKTT+GE LS AL Y F D+D ++ + +VA+I G FR E++
Sbjct: 5 IFLIGARGCGKTTIGEALSHALGYAFRDTDHHL-QFTTQRTVAEIVAAEGWESFRARETE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
+L+ ++ P ++ATGGG V+ +N R+MR+ G ++L+ P + LARR+
Sbjct: 64 SLKAVT-APSTIIATGGGMVLAEVNRRYMREHGQVIWLSAPSEVLARRL 111
>gi|334317435|ref|YP_004550054.1| shikimate kinase [Sinorhizobium meliloti AK83]
gi|384530561|ref|YP_005714649.1| shikimate kinase [Sinorhizobium meliloti BL225C]
gi|384537261|ref|YP_005721346.1| shikimate kinase [Sinorhizobium meliloti SM11]
gi|407721744|ref|YP_006841406.1| shikimate kinase [Sinorhizobium meliloti Rm41]
gi|418400165|ref|ZP_12973708.1| shikimate kinase [Sinorhizobium meliloti CCNWSX0020]
gi|433614498|ref|YP_007191296.1| Shikimate kinase [Sinorhizobium meliloti GR4]
gi|333812737|gb|AEG05406.1| Shikimate kinase [Sinorhizobium meliloti BL225C]
gi|334096429|gb|AEG54440.1| Shikimate kinase [Sinorhizobium meliloti AK83]
gi|336034153|gb|AEH80085.1| Shikimate kinase [Sinorhizobium meliloti SM11]
gi|359505841|gb|EHK78360.1| shikimate kinase [Sinorhizobium meliloti CCNWSX0020]
gi|407319976|emb|CCM68580.1| Shikimate kinase [Sinorhizobium meliloti Rm41]
gi|429552688|gb|AGA07697.1| Shikimate kinase [Sinorhizobium meliloti GR4]
Length = 192
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 10/159 (6%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L + L +G+MG+GK+ +G + + AL F DSD +E++ +V+ +F GE F
Sbjct: 19 TLGKRNLVFIGLMGAGKSAIGRLTAQALGVPFVDSDHEIERV-SRMTVSDLFATYGEEEF 77
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGT 209
R E++ L++L +VV+TGGGA + + R +++ G+T++LN LD L R+
Sbjct: 78 RALEARVLKRLLRSGPRVVSTGGGAYINERSRRHIKKGGLTIWLNAELDVLWERVNK--R 135
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
D+ PLL ++ L L + R YA AD TV
Sbjct: 136 DTRPLLKTENPKQ------TLENLMRARYPIYAEADLTV 168
>gi|238755111|ref|ZP_04616458.1| Shikimate kinase 1 [Yersinia ruckeri ATCC 29473]
gi|238706671|gb|EEP99041.1| Shikimate kinase 1 [Yersinia ruckeri ATCC 29473]
Length = 195
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 73/118 (61%), Gaps = 3/118 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G+GKTT+G L+ AL Y F D+D ++++ +VA+I G + FR E
Sbjct: 24 QTIFMVGARGAGKTTIGNALAQALGYRFIDTDSFMQQ-TSLLTVAEIVAREGWSGFRRRE 82
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS 211
S ALQ ++ P+ VVATGGGAV+ N FMR+ G+ ++L D LA R+A D+
Sbjct: 83 SLALQTVT-SPETVVATGGGAVLSADNRAFMRRHGLVIYLRASADILAERLAEEPEDA 139
>gi|225156442|ref|ZP_03724778.1| Shikimate kinase [Diplosphaera colitermitum TAV2]
gi|224802950|gb|EEG21196.1| Shikimate kinase [Diplosphaera colitermitum TAV2]
Length = 198
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G L+LVG MG+GKTTV I++ L Y + DSD+++E+ T + IF GEA FR
Sbjct: 5 GVNLYLVGFMGTGKTTVSRIVAQRLGYHWVDSDQFIERAQRRT-IPDIFATEGEAAFRVM 63
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSF 212
E + ++ ++VVA GGG +V P ++ +G+ + L+ L+ + +R GT +
Sbjct: 64 EREFVENGHAPTREVVACGGGLIVPPGMLDLLKSKGVVICLHASLETILQRTQGQGTATR 123
Query: 213 PLLDYDSADSYTKAFTA 229
PLL+ D+ + +A A
Sbjct: 124 PLLNVDNPEQRIRALYA 140
>gi|338730285|ref|YP_004659677.1| 3-dehydroquinate synthase [Thermotoga thermarum DSM 5069]
gi|335364636|gb|AEH50581.1| 3-dehydroquinate synthase [Thermotoga thermarum DSM 5069]
Length = 547
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 88/156 (56%), Gaps = 8/156 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L G+ GSGKTTVG+IL++ L + F D+D+ VE + +IF+ GE FR++E
Sbjct: 3 KSVVLCGLSGSGKTTVGKILAEKLGWFFIDTDQLVED-TTSMDIPKIFQIYGEEGFRQFE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQG-ITVFLNVPLDALARRIAAVGTDSFP 213
+ ++K+ + V++ G GAV + N +++ + VFLN P+D L R+ S P
Sbjct: 62 KQMVEKVCKLQNVVISIGAGAVTKNENVDLLKKNCVVVFLNAPIDILVARLE--NDSSRP 119
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYAN-ADATV 248
LL +SA++ K L L K+R Y AD TV
Sbjct: 120 LL--NSANTSEKR-NKLEVLQKQREPIYRQIADITV 152
>gi|15966430|ref|NP_386783.1| shikimate kinase [Sinorhizobium meliloti 1021]
gi|81634006|sp|Q92ME6.1|AROK_RHIME RecName: Full=Shikimate kinase; Short=SK
gi|15075701|emb|CAC47256.1| Putative shikimate kinase I [Sinorhizobium meliloti 1021]
Length = 192
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 10/159 (6%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L + L +G+MG+GK+ +G + + AL F DSD +E++ +V+ +F GE F
Sbjct: 19 TLGKRNLVFIGLMGAGKSAIGRLTAQALGVPFVDSDHEIERV-SRMTVSDLFATYGEEEF 77
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGT 209
R E++ L++L +VV+TGGGA + + R +++ G+T++LN LD L R+
Sbjct: 78 RALEARVLKRLLRSGPRVVSTGGGAYINERSRRHIKKGGLTIWLNAELDVLWERVNK--R 135
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
D+ PLL ++ L L + R YA AD TV
Sbjct: 136 DTRPLLKTENPKQ------TLENLMRARYPIYAEADLTV 168
>gi|421545121|ref|ZP_15991186.1| shikimate kinase [Neisseria meningitidis NM140]
gi|421548141|ref|ZP_15994169.1| shikimate kinase [Neisseria meningitidis NM2781]
gi|402321804|gb|EJU57276.1| shikimate kinase [Neisseria meningitidis NM140]
gi|402326863|gb|EJU62261.1| shikimate kinase [Neisseria meningitidis NM2781]
Length = 170
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+G+MG+GKTT+G ++ LDY F DSD + G + IF+ GE FR E+
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAA-AAGVPIPTIFEMEGEQGFRSRETA 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+KL ++P V+++GGGAV++ N +R+ G V+L+ P + L R +S PLL
Sbjct: 67 ILKKLVILPHIVLSSGGGAVLKEENRALIRKSGTVVYLHAPPEILLERTRC--DNSRPLL 124
Query: 216 DYDSADSYTKAFTALSALSKERSEAY-ANADATVSLLN 252
AD K L L R Y AD TV N
Sbjct: 125 QV--ADPLEK----LRELYAARDPVYRQTADFTVESAN 156
>gi|431929547|ref|YP_007242593.1| shikimate kinase [Thioflavicoccus mobilis 8321]
gi|431827850|gb|AGA88963.1| shikimate kinase [Thioflavicoccus mobilis 8321]
Length = 174
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 89/161 (55%), Gaps = 13/161 (8%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
+ Q +FLVG MG+GK+T+G L++ L Y F DSD+ +++ G + IF+ GEA FR
Sbjct: 2 IRAQNIFLVGPMGAGKSTIGRQLAEVLSYEFKDSDQEIQRRT-GVDIPTIFEFEGEAGFR 60
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWR-FMRQGITVFLNV-PLDALARRIAAVGT 209
+ E + L++L + V+ATGGGAV+RP N + +G+ V+L+ P AR
Sbjct: 61 DRERQILEELIQGERIVLATGGGAVLRPENRQDLTARGVVVYLHCSPEQQYAR---TARD 117
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYAN-ADATVS 249
S PLL D++D + L L ER Y AD VS
Sbjct: 118 RSRPLL--DTSDPLLR----LRELMAERDPLYRQVADLVVS 152
>gi|406996986|gb|EKE15180.1| hypothetical protein ACD_12C00117G0003 [uncultured bacterium]
Length = 173
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 72/121 (59%), Gaps = 2/121 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MGSGKTTV IL+ L+ + D + K G ++ +IF + GE +FR+ E++
Sbjct: 7 IILIGFMGSGKTTVANILAKKLNLEVIEMDHLILKKSGRKNIQEIFVKDGEEHFRDLETR 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
+++ + V++TGGG V++ N +F+++G +FL + L +R+ +G S PL
Sbjct: 67 IAKEILELDDVVISTGGGIVMKQKNLKFLKKGKIIFLKTSFEVLEKRL--MGDSSRPLFR 124
Query: 217 Y 217
Y
Sbjct: 125 Y 125
>gi|350563406|ref|ZP_08932228.1| Shikimate kinase [Thioalkalimicrobium aerophilum AL3]
gi|349779270|gb|EGZ33617.1| Shikimate kinase [Thioalkalimicrobium aerophilum AL3]
Length = 175
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
++ Q +FLVG MG+GK+TVG IL++ L Y F DSD +E G ++ IF GE FR
Sbjct: 1 MNKQSIFLVGPMGAGKSTVGRILAEKLGYEFIDSDHEIEART-GVTIPVIFDIEGEGGFR 59
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTD 210
ES + ++ +P V+ATGGGAV+ N R + +G V+L + AL +R
Sbjct: 60 ARESAVIDDITQLPGLVLATGGGAVLSADNRRHLAARGFVVYLRSTVPALVQRTK--NDR 117
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAY 241
+ PLL D+ ++ ++ L ER Y
Sbjct: 118 NRPLLQTDNPEA------VIAHLLTERGPLY 142
>gi|190893663|ref|YP_001980205.1| shikimate kinase [Rhizobium etli CIAT 652]
gi|417109911|ref|ZP_11963454.1| shikimate kinase [Rhizobium etli CNPAF512]
gi|190698942|gb|ACE93027.1| shikimate kinase protein [Rhizobium etli CIAT 652]
gi|327188711|gb|EGE55910.1| shikimate kinase [Rhizobium etli CNPAF512]
Length = 196
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 13/169 (7%)
Query: 81 LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQ 140
LK + R + L + L LVG+MG+GK++VG I++ L F DSD +E++ ++A+
Sbjct: 12 LKDRAR---AALGSRNLILVGLMGAGKSSVGRIVASQLGIPFIDSDHEIERV-SRMTIAE 67
Query: 141 IFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDA 199
+F GE FR E++ +++L +VV+TGGGA V R + R G++V+L LD
Sbjct: 68 LFAAYGEDEFRALETRVIKRLLKSGPRVVSTGGGAFVNERTRRHIKRGGLSVWLKADLDV 127
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
L R+ D+ PLL ++ L L R YA AD TV
Sbjct: 128 LWERVNK--RDTRPLLKTENPKQ------TLENLMNARYPIYAQADLTV 168
>gi|121534449|ref|ZP_01666272.1| Shikimate kinase [Thermosinus carboxydivorans Nor1]
gi|121306942|gb|EAX47861.1| Shikimate kinase [Thermosinus carboxydivorans Nor1]
Length = 184
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 83/154 (53%), Gaps = 10/154 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKT G +L+ L F D DK +E L G ++++IF GEAYFR+ E
Sbjct: 4 IVLIGFMGTGKTCTGRLLAQRLRRVFVDIDKKIE-LEQGMTISEIFHTYGEAYFRQRERA 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
+ K++ V+ATGGGAV+ P N ++ QG+ ++L D + R + S PLL
Sbjct: 63 TIAKVARYTNTVIATGGGAVLNPDNIICLKQQGVVIWLTASPDVIFERTSR-RRGSRPLL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAY-ANADATV 248
D + A++ L ER Y A AD T+
Sbjct: 122 DRPNPRD------AIAELLAERRRLYQAAADFTI 149
>gi|115433984|ref|NP_001041750.1| Os01g0102600 [Oryza sativa Japonica Group]
gi|113531281|dbj|BAF03664.1| Os01g0102600 [Oryza sativa Japonica Group]
gi|215694019|dbj|BAG89218.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187341|gb|EEC69768.1| hypothetical protein OsI_00024 [Oryza sativa Indica Group]
gi|222617567|gb|EEE53699.1| hypothetical protein OsJ_00021 [Oryza sativa Japonica Group]
Length = 269
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 103/189 (54%), Gaps = 7/189 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+++VG + K + ++L++++ Y + S++ +E ++GG F+ES + E E++
Sbjct: 78 IYIVGTDCTAKRNIAKLLANSIIYRYLCSEELLEDVLGGKDALNAFRESDLNGYLEVETE 137
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
L++L+ + V+ G GAV+ N +R G+++++++PL+ + + S P
Sbjct: 138 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDIPLELVVNDMLKTQATSDP--- 194
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLV 276
DS+++A + + E E Y +D TVS+ N+A+ +G + +T + +E++
Sbjct: 195 ----DSFSEAMSRVRQRHDELKERYGVSDITVSVQNVASQLGYSSIDSVTLEDMVLEIVR 250
Query: 277 QAQKYLNSK 285
Q ++ + +K
Sbjct: 251 QIERLIRAK 259
>gi|114330403|ref|YP_746625.1| shikimate kinase [Nitrosomonas eutropha C91]
gi|114307417|gb|ABI58660.1| shikimate kinase [Nitrosomonas eutropha C91]
Length = 215
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GMMG+GKTTVG++L++ + TF D D +++ G + IF+ GEA FR+ ES+
Sbjct: 31 IILIGMMGAGKTTVGKLLANLVGKTFIDVDHEIQQRTG-VGIPVIFEIEGEAGFRKRESE 89
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+++ V+ATGGGA++ P N +RQ G ++L P+ L RR + PLL
Sbjct: 90 VLREVVQQQNIVLATGGGAILYPDNRTLLRQHGTVIYLCAPVSELRRRTHQ--DKNRPLL 147
Query: 216 DYDSADSYTKA-FTALSALSKE 236
+A + FT L +E
Sbjct: 148 QTGNAHAKLAGLFTQRDPLYRE 169
>gi|409402045|ref|ZP_11251671.1| bifunctional shikimate kinase/3-dehydroquinate synthase [Acidocella
sp. MX-AZ02]
gi|409129363|gb|EKM99221.1| bifunctional shikimate kinase/3-dehydroquinate synthase [Acidocella
sp. MX-AZ02]
Length = 537
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 89/156 (57%), Gaps = 12/156 (7%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVG+MG+GKT +G+ LS L F D+D+ +E+ G ++++IFK GEAYFR E
Sbjct: 3 RSIVLVGLMGAGKTAIGKRLSALLKLPFFDADEEIER-AAGMTISEIFKTHGEAYFRAGE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+ +++L + V+ATGGGA + +R+ ++V+L P+ L +R + G P
Sbjct: 62 KRVIKRLLSQGRIVLATGGGAFMDAETRATIREYAVSVWLRCPIPVLVQRTS--GRTHRP 119
Query: 214 LLDY-DSADSYTKAFTALSALSKERSEAYANADATV 248
LL+ + AD LS LS RS YA AD V
Sbjct: 120 LLNAGNPAD-------ILSKLSAVRSPVYALADIIV 148
>gi|49476287|ref|YP_034328.1| shikimate kinase [Bartonella henselae str. Houston-1]
gi|81647491|sp|Q6G1N9.1|AROK_BARHE RecName: Full=Shikimate kinase; Short=SK
gi|49239095|emb|CAF28398.1| Shikimate kinase [Bartonella henselae str. Houston-1]
Length = 210
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 22/201 (10%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
++ S LD + L L+G+MG GK+ +G+ ++ L F DSD+ +EK ++ ++FK G
Sbjct: 17 QLLSSLDNRALVLIGLMGVGKSVIGKRIATMLCLPFYDSDQEIEK-AAQMTITELFKTYG 75
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRP-LNWRFMRQGITVFLNVPLDALARRIA 205
E+ FR E + + L V+ATGGGA + + + GI+++L V LD L +R++
Sbjct: 76 ESEFRALEQRVILNLMKNRPLVLATGGGAYINEDIRKAVHKNGISIWLKVDLDTLMQRVS 135
Query: 206 AVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDI 265
T PLL ++ + L K+R YA A+ T++ K+
Sbjct: 136 KRPTR--PLLQTENPKE------TMQKLMKQRYPIYAKANLTIN--------SHKE---- 175
Query: 266 TPTTIAMEVLVQAQKYLNSKR 286
T+A V+ Q YL++++
Sbjct: 176 NRQTVAQNVIRSVQHYLDTEK 196
>gi|347754071|ref|YP_004861635.1| shikimate kinase [Candidatus Chloracidobacterium thermophilum B]
gi|347586589|gb|AEP11119.1| Shikimate kinase [Candidatus Chloracidobacterium thermophilum B]
Length = 199
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 84/161 (52%), Gaps = 19/161 (11%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MGSGKTTVG+ L+ L F D D+ + + G S+ ++F+ GE FR+ E
Sbjct: 14 IFLVGFMGSGKTTVGQHLAARLGGRFIDLDERIAR-AAGRSIPELFQTEGETGFRQREHA 72
Query: 157 ALQKLSL------VPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGT 209
AL ++ +P +VA GGG RP N +RQ G +V+L+VP D LA R+ G
Sbjct: 73 ALVQVCAELRQDDLPWNIVALGGGTFTRPENRNHIRQTGCSVWLDVPFDILATRVVPDGR 132
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PL + S D + ++R YA AD V +
Sbjct: 133 R--PL--WTSVDEARLRY-------EQRRADYAQADIRVPV 162
>gi|410692782|ref|YP_003623403.1| Shikimate kinase [Thiomonas sp. 3As]
gi|294339206|emb|CAZ87560.1| Shikimate kinase [Thiomonas sp. 3As]
Length = 174
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
++G+MG+GKTTVG L+ + F DSD +E+ G T +A +F GEA FRE E++A+
Sbjct: 1 MIGLMGAGKTTVGRTLAQRVGLRFIDSDHEIEREQGCT-IAALFSRLGEAGFREIEARAI 59
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
L+ + V+ATGGGAV+RP N + + + G V+L D LA R+
Sbjct: 60 DALTQLDGIVLATGGGAVLRPENRKALHERGTVVYLRASPDDLAHRL 106
>gi|309775588|ref|ZP_07670588.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
gi|308916682|gb|EFP62422.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
Length = 421
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 19/164 (11%)
Query: 92 LDGQC-LFLVGMMGSGKTTVGEILSDALDYTFAD-SDKYVEKLMGGTSVAQIFKESGEAY 149
L +C + L+GM +GKTT+G++L D + F D D +EK G S+ +IF+ESGEA
Sbjct: 250 LKERCNIVLIGMPSAGKTTIGKMLEDRMQKEFIDLDDVIIEK--AGKSIPEIFEESGEAG 307
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVG 208
FR E++A ++S + +++ATGGG + +N ++RQ GIT+F++ +D
Sbjct: 308 FRAIETEAAIEVSKLNNKIIATGGGTIKHKVNMDYLRQNGITIFIDRDVDK--------- 358
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
L+ D +K+ AL + ER Y A V++ N
Sbjct: 359 -----LISSDPNRPLSKSSDALQKMHAERLPLYQKYAAYVAVNN 397
>gi|410097075|ref|ZP_11292059.1| shikimate kinase [Parabacteroides goldsteinii CL02T12C30]
gi|409224869|gb|EKN17793.1| shikimate kinase [Parabacteroides goldsteinii CL02T12C30]
Length = 173
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 89/159 (55%), Gaps = 10/159 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G MG+GKTTVG+ L+ + +F D D Y+E T V QIF E GE FR+ E +
Sbjct: 4 IFLIGYMGAGKTTVGKDLAKRMGLSFIDLDCYIEARYHKT-VGQIFAEKGEEAFRDIERR 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L ++++ +++TGGGA N FM + G TV+L V ++ LA+R+ + + P+L
Sbjct: 63 MLHEVAMFEDVLISTGGGAPCFFDNMEFMNETGSTVYLKVSVEELAKRL-EICKSTRPVL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA----DATVSL 250
S D AF A S ++R+ Y A DA V L
Sbjct: 122 KGRSGDELV-AFIAESL--EKRTPHYMKASIVFDAEVML 157
>gi|392977829|ref|YP_006476417.1| shikimate kinase [Enterobacter cloacae subsp. dissolvens SDM]
gi|392323762|gb|AFM58715.1| shikimate kinase [Enterobacter cloacae subsp. dissolvens SDM]
Length = 174
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 85/153 (55%), Gaps = 15/153 (9%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +FLVG G GKTTVG L+ A F D+D +++K G ++A+I ++ G FR E
Sbjct: 3 QPIFLVGPRGCGKTTVGLELARACQRHFIDTDHWLQK-QAGQTIAEIVEKEGWESFRSRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+ AL+ ++ P V+ATGGG ++ N FMR+ GI ++L P+ AL R+ ++FP
Sbjct: 62 TAALEAVT-APDAVIATGGGIILAEYNRHFMREKGIVIYLCAPVAALVGRL-----EAFP 115
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADA 246
+ A T+ LS+E SE A DA
Sbjct: 116 ------EEGQRPALTS-RPLSEEVSEVLAERDA 141
>gi|392965802|ref|ZP_10331221.1| Shikimate kinase [Fibrisoma limi BUZ 3]
gi|387844866|emb|CCH53267.1| Shikimate kinase [Fibrisoma limi BUZ 3]
Length = 160
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 102 MMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKL 161
M SGKTT+G+ +++AL Y F D+DK + + G T + IF +SGE+YFRE E + L K+
Sbjct: 1 MPSSGKTTLGKRIAEALHYRFVDTDKRIVREEGRT-INDIFAQSGESYFREAERRVLCKI 59
Query: 162 SLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLLDYDSA 220
VVATGGG N ++ GI+VFL+VP+ L +R+ A D PL Y++
Sbjct: 60 KPGSSLVVATGGGMPCFNDNMDYINATGISVFLDVPVAVLVQRMVAHAIDDRPL--YNAN 117
Query: 221 DSYTKAFTALSALSKERSEAYANADATVS 249
D + +L + R Y+ A V+
Sbjct: 118 DP--ELVRSLEQRYQSRLPYYSKAHVIVT 144
>gi|395764837|ref|ZP_10445457.1| shikimate kinase [Bartonella sp. DB5-6]
gi|395413654|gb|EJF80116.1| shikimate kinase [Bartonella sp. DB5-6]
Length = 210
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 90/166 (54%), Gaps = 12/166 (7%)
Query: 86 REVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKES 145
+++ S LD + L LVG+MG+GK+ +G+ ++ L F DSD+ +EK ++ ++F+
Sbjct: 16 KQLLSTLDTRALVLVGLMGAGKSVIGKRVATILHLPFYDSDQEIEK-AAQMTITELFETY 74
Query: 146 GEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWR--FMRQGITVFLNVPLDALARR 203
GE FR E + + L V+ATGGGA + N R + GI+++L V LD L +R
Sbjct: 75 GEPEFRALEQRVILNLIKKKPLVLATGGGAYINQ-NIRKAIHQNGISIWLKVDLDILMKR 133
Query: 204 IAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
++ T PLL ++ + L ++R YA A+ T++
Sbjct: 134 VSRCPTR--PLLQTENPKE------TMQKLMEQRYPIYAKANLTIN 171
>gi|206890501|ref|YP_002248005.1| shikimate kinase [Thermodesulfovibrio yellowstonii DSM 11347]
gi|238058104|sp|B5YHI3.1|AROK_THEYD RecName: Full=Shikimate kinase; Short=SK
gi|206742439|gb|ACI21496.1| shikimate kinase [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 173
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 22/190 (11%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKT+VG++++ L + F D D+ +EK G +++IF + GE+ FR+ E +
Sbjct: 4 IVLIGFMGTGKTSVGKLVAKKLGFDFVDVDEVIEKATG-MEISEIFSKFGESRFRDIEEE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNW-RFMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
++ ++ +QV+ATGGG V+R N R + G+ L + + R+ T + PLL
Sbjct: 63 MIKLITPKKRQVIATGGGVVLRDENMKRLKKDGVIFCLRASENVIFERLKQ--TTNRPLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVL 275
++ + K L ++R Y AD CI D +TP +A +++
Sbjct: 121 QVENPEERIK------ELLQKRMPLYEKAD---------FCI---DTEGLTPEEVAEKII 162
Query: 276 VQAQKYLNSK 285
+ ++ N K
Sbjct: 163 KEYERLSNGK 172
>gi|448240744|ref|YP_007404797.1| shikimate kinase II [Serratia marcescens WW4]
gi|445211108|gb|AGE16778.1| shikimate kinase II [Serratia marcescens WW4]
gi|453062500|gb|EMF03491.1| shikimate kinase II [Serratia marcescens VGH107]
Length = 174
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 72/118 (61%), Gaps = 3/118 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LF++G G+GKTTVG L+ AL Y F D+D ++++ SVA++ + G FR E
Sbjct: 3 QTLFMIGARGAGKTTVGRALALALGYQFVDTDLFMQQ-AAQMSVAEMVEREGWLGFRRRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS 211
+ ALQ ++ P +VATGGGA++ N +FMRQ G ++L P LA+R+ D+
Sbjct: 62 TVALQTVT-KPSTIVATGGGAILAEENRQFMRQHGTVIYLRAPASVLAQRLEEYPEDA 118
>gi|256752515|ref|ZP_05493371.1| Shikimate kinase [Thermoanaerobacter ethanolicus CCSD1]
gi|256748581|gb|EEU61629.1| Shikimate kinase [Thermoanaerobacter ethanolicus CCSD1]
Length = 171
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 20/179 (11%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L G M +GKTTVG+ ++ + + F D+DK +EK M +V+ IF++ GE YFR+ E
Sbjct: 4 IVLTGFMATGKTTVGKKVATTMSFGFIDTDKMIEK-MANMTVSDIFEKYGENYFRKLEKA 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
A++K + + V+ATGGG V+ P N +R+ V V + R D PLL
Sbjct: 63 AVKKAARLKNFVIATGGGVVLNPSNIVQLRKNGVVICFVARPEIILRNIGKNKDR-PLLM 121
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVL 275
D+ + + L +ER Y AD T+ DV D+T +A EV+
Sbjct: 122 VDNPEE------KIRQLLREREPFYRFADYTI------------DVSDMTIDEVAEEVI 162
>gi|442804749|ref|YP_007372898.1| shikimate kinase AroK [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740599|gb|AGC68288.1| shikimate kinase AroK [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 169
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 74/120 (61%), Gaps = 7/120 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L G+MGSGKTTVG +L++ L+ F D+D Y+E G + ++F E GE YFRE E K
Sbjct: 6 IVLTGIMGSGKTTVGRMLAEKLNMGFVDTDWYIEGKYG--KIHELF-EKGEDYFREIEHK 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
A+ ++S + V+ATGGG V R N + ++GI FL+ PL + ++ + T PLL
Sbjct: 63 AVLEISEMEGVVIATGGGVVKRQDNVYALKKKGIIFFLDRPLKNI---LSDIETSGRPLL 119
>gi|225848020|ref|YP_002728183.1| shikimate kinase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643921|gb|ACN98971.1| shikimate kinase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 166
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ ++LVG MGSGK+TVG++L+D F D DK +E+ + IF++ GE YFRE E
Sbjct: 2 KNIYLVGFMGSGKSTVGKLLADKTSRDFVDVDKLIEE-REKMKIKDIFEKKGELYFRELE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
K LQ+L VV+TGGG N M++ GI ++L++ L+ + RI ++ P
Sbjct: 61 KKYLQELLNTQNLVVSTGGGLGADAENMNQMKKNGIVIWLDLNLNTILERIK--NDENRP 118
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPT 268
LL+ + + L ER + Y A ++ N ++++L+ T
Sbjct: 119 LLN--------QPLDKIKKLFDERKKVYGLATYRINAENKTPFQIVEEILNKIKT 165
>gi|307942510|ref|ZP_07657858.1| shikimate kinase [Roseibium sp. TrichSKD4]
gi|307774149|gb|EFO33362.1| shikimate kinase [Roseibium sp. TrichSKD4]
Length = 204
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 10/162 (6%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
V L + + LVG+MG GK+TVG L+ LD F D+D +E+ +V++IF E GE
Sbjct: 23 VVEALGNKTIVLVGIMGCGKSTVGRRLAQRLDLNFLDADTEIER-AANMTVSEIFAEHGE 81
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWR-FMRQGITVFLNVPLDALARRIAA 206
YFR E + + +L QV+ATGGGAV+ + GI+++L + + R+
Sbjct: 82 PYFRSGEERVIARLLQEGPQVLATGGGAVMSEATRKEIAENGISIWLKAEFNTVMARVRR 141
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
T PLL + + AL ++R YA A+ TV
Sbjct: 142 RSTR--PLLQNPDPEG------TMRALMEKRHPVYALAELTV 175
>gi|241206575|ref|YP_002977671.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860465|gb|ACS58132.1| Shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 196
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 22/201 (10%)
Query: 81 LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQ 140
LK + R + L + L LVG+MG+GK++VG I++ L F DSD +E+ + ++A+
Sbjct: 12 LKDRAR---AALGSRNLILVGLMGAGKSSVGRIVASQLSIPFIDSDLEIER-VSRMTIAE 67
Query: 141 IFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDA 199
+F GE FR E++ +++L +VV+TGGGA + + +++ G++V+L LD
Sbjct: 68 LFAAYGEQEFRALEARVIKRLLKSGPRVVSTGGGAFINDRTRKHIKKGGLSVWLKADLDV 127
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL 259
L R+A D+ PLL ++ L L R YA AD TV ++ I
Sbjct: 128 LWDRVAK--RDTRPLLKTENPKQ------TLEGLMNARYPIYAQADLTVLSRDVRKEIMA 179
Query: 260 KDVLDITPTTIAMEVLVQAQK 280
+VL + L++AQK
Sbjct: 180 DEVL---------KALIEAQK 191
>gi|188036033|pdb|2PT5|A Chain A, Crystal Structure Of Shikimate Kinase (Aq_2177) From
Aquifex Aeolicus Vf5
gi|188036034|pdb|2PT5|B Chain B, Crystal Structure Of Shikimate Kinase (Aq_2177) From
Aquifex Aeolicus Vf5
gi|188036035|pdb|2PT5|C Chain C, Crystal Structure Of Shikimate Kinase (Aq_2177) From
Aquifex Aeolicus Vf5
gi|188036036|pdb|2PT5|D Chain D, Crystal Structure Of Shikimate Kinase (Aq_2177) From
Aquifex Aeolicus Vf5
Length = 168
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 14/154 (9%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++L+G SGK+TVG +LS +L+ F D D+ V+K G S+ QIF++ GEAYFR+ E +
Sbjct: 3 IYLIGFXCSGKSTVGSLLSRSLNIPFYDVDEEVQK-REGLSIPQIFEKKGEAYFRKLEFE 61
Query: 157 ALQKLSLVPQQVVATGG--GAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPL 214
L+ LS V++TGG GA LN+ R G TVF+++P + R + PL
Sbjct: 62 VLKDLSEKENVVISTGGGLGANEEALNFXKSR-GTTVFIDIPFEVFLERCKD--SKERPL 118
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYANADATV 248
L + + L +ER + Y+ AD V
Sbjct: 119 L--------KRPLDEIKNLFEERRKIYSKADIKV 144
>gi|160895366|ref|ZP_02076137.1| hypothetical protein CLOL250_02925 [Clostridium sp. L2-50]
gi|156863059|gb|EDO56490.1| shikimate dehydrogenase [Clostridium sp. L2-50]
Length = 453
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 79/127 (62%), Gaps = 5/127 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L G MGSGKTTVG++LS+ YTF D+D+Y+E+ G T +A++F + GEAYFR+ E+
Sbjct: 290 IILTGFMGSGKTTVGKLLSERYGYTFIDTDQYIEEKCGCT-IAELFSKKGEAYFRQLETD 348
Query: 157 ALQKLSL-VPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFPL 214
L++L+ + V++TGGG +R N G ++L + + + R++ G ++ PL
Sbjct: 349 ILKELNASLTHAVLSTGGGLPLREENAAELATLGTVIYLQITPEEVISRLS--GDNTRPL 406
Query: 215 LDYDSAD 221
L D +
Sbjct: 407 LSGDDPE 413
>gi|52076607|dbj|BAD45509.1| unknown protein [Oryza sativa Japonica Group]
Length = 265
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 103/189 (54%), Gaps = 7/189 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+++VG + K + ++L++++ Y + S++ +E ++GG F+ES + E E++
Sbjct: 74 IYIVGTDCTAKRNIAKLLANSIIYRYLCSEELLEDVLGGKDALNAFRESDLNGYLEVETE 133
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
L++L+ + V+ G GAV+ N +R G+++++++PL+ + + S P
Sbjct: 134 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDIPLELVVNDMLKTQATSDP--- 190
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLV 276
DS+++A + + E E Y +D TVS+ N+A+ +G + +T + +E++
Sbjct: 191 ----DSFSEAMSRVRQRHDELKERYGVSDITVSVQNVASQLGYSSIDSVTLEDMVLEIVR 246
Query: 277 QAQKYLNSK 285
Q ++ + +K
Sbjct: 247 QIERLIRAK 255
>gi|196232000|ref|ZP_03130856.1| Shikimate kinase [Chthoniobacter flavus Ellin428]
gi|196224122|gb|EDY18636.1| Shikimate kinase [Chthoniobacter flavus Ellin428]
Length = 173
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ +G MGSGKT+VG +++ L + F D+D V + G +++IF GE +FR++E+
Sbjct: 5 IVFIGFMGSGKTSVGRLVAQRLGFQFVDTDAVVVE-RAGMQISEIFARHGEPWFRDHETS 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIA 205
AL LS++ + V++TGGG V+RP N +++ G V+L D + R++
Sbjct: 64 ALSSLSILNRSVISTGGGIVLRPQNRALLQELGFVVWLTASEDVIFERVS 113
>gi|114762818|ref|ZP_01442250.1| shikimate kinase [Pelagibaca bermudensis HTCC2601]
gi|114544428|gb|EAU47435.1| shikimate kinase [Roseovarius sp. HTCC2601]
Length = 192
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 86/156 (55%), Gaps = 10/156 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVGMMG+GKT VG+ L+ AL F DSD +E L ++A+IF GE +FR+ E
Sbjct: 15 KTVVLVGMMGAGKTAVGKALAAALHVPFRDSDAEIE-LAANMTIAEIFSRDGEPFFRQKE 73
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFP 213
S+ + +L V++TGGGA + N + + +G+ V+L+ L L R+ T P
Sbjct: 74 SQVISRLLDGTPSVLSTGGGAYMSAANRKMITERGVAVWLDAALPVLWNRVKHKNTR--P 131
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL + D + L + ++R YA AD TV+
Sbjct: 132 LL--RTPDPH----ATLREIYEQRVPVYAMADVTVT 161
>gi|402489932|ref|ZP_10836725.1| shikimate kinase [Rhizobium sp. CCGE 510]
gi|401811271|gb|EJT03640.1| shikimate kinase [Rhizobium sp. CCGE 510]
Length = 196
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 13/169 (7%)
Query: 81 LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQ 140
LK + R + L + L LVG+MG+GK++VG I++ L F DSD +E++ ++ +
Sbjct: 12 LKDRAR---AALGSRNLILVGLMGAGKSSVGRIVATQLGIPFIDSDHEIERV-SRMTIPE 67
Query: 141 IFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDA 199
+F GE FR E++ +++L +VV+TGGGA + R +++ G++V+L LD
Sbjct: 68 LFAAYGEVEFRALETRVVKRLLKSGPRVVSTGGGAFINDRTRRHIKKGGLSVWLKADLDV 127
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
L R+A D+ PLL ++ L L R YA AD TV
Sbjct: 128 LWDRVAK--RDTRPLLKTENPKQ------TLEGLMNARYPIYAQADLTV 168
>gi|383807387|ref|ZP_09962947.1| shikimate kinase [Candidatus Aquiluna sp. IMCC13023]
gi|383298741|gb|EIC91356.1| shikimate kinase [Candidatus Aquiluna sp. IMCC13023]
Length = 164
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 7/148 (4%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+ LVG MG+GKTT+G+ L+ LD F D+DK V G S+ +F GEAYFR+ ES
Sbjct: 3 SIVLVGPMGAGKTTLGKRLAKVLDLPFVDTDKMVTADHG--SIKDLFAAKGEAYFRDLES 60
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
AL K +L + VVATGGG V+ +N + Q T+FL+ ++ + R ++ PLL
Sbjct: 61 AALVK-ALDGRNVVATGGGIVLSEVNRALLTQNATIFLDTNMEFVLR---SLNVSKRPLL 116
Query: 216 DYDSADSYTKAFTALSALSKERSEAYAN 243
D+ +S+ + + KE S A N
Sbjct: 117 K-DNPESWGQIYQDRLEFYKEVSIATVN 143
>gi|346224140|ref|ZP_08845282.1| shikimate kinase [Anaerophaga thermohalophila DSM 12881]
Length = 173
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 79/151 (52%), Gaps = 6/151 (3%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ ++L G MGSGKTT G +L+DAL+ F D D +EK G SV+++F + GE FR E
Sbjct: 3 EPIYLTGFMGSGKTTFGRMLADALNRDFLDLDHLIEK-QEGASVSELFSKYGEDGFRSIE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFP 213
L ++ATGGGA N FM R G+T++L V +ALA+R+ D P
Sbjct: 62 HNILLSTKDRTNAIIATGGGAPCFQDNMDFMNRHGLTIYLKVSPEALAKRLLP-SRDHRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANA 244
L+ + S T+ + ER Y A
Sbjct: 121 LI---AGKSETELLNFIRTKLSERDPWYNKA 148
>gi|334143176|ref|YP_004536332.1| shikimate kinase [Thioalkalimicrobium cyclicum ALM1]
gi|333964087|gb|AEG30853.1| Shikimate kinase [Thioalkalimicrobium cyclicum ALM1]
Length = 175
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
++ Q +FLVG MG+GK+TVG IL++ L Y F DSD +E G ++ IF GEA FR
Sbjct: 1 MNKQSIFLVGPMGAGKSTVGRILAEKLGYDFMDSDHEIEART-GVTIPVIFDIEGEAGFR 59
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTD 210
E+ + ++ P V+ATGGGAV+ N R + +G V+L L AL +R
Sbjct: 60 ARETTVIDDITQQPGLVLATGGGAVLSAENRRHLAARGFVVYLRSTLPALIQRTK--NDR 117
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAY 241
+ PLL ++ + T + L ER Y
Sbjct: 118 NRPLLQTENPE------TVIERLLTERGPLY 142
>gi|392958109|ref|ZP_10323627.1| shikimate kinase [Bacillus macauensis ZFHKF-1]
gi|391875892|gb|EIT84494.1| shikimate kinase [Bacillus macauensis ZFHKF-1]
Length = 167
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ ++L G MGSGKTTVG +L +AL D+D +E+ G + +IF E GEA FR YE
Sbjct: 2 KTVYLTGFMGSGKTTVGALLGEALGVPVIDTDHVIEEQQ-GKRITEIFAEEGEAAFRAYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFP 213
L+ + VV TGGG + N +M G VFL+ PL+ + R+ G ++ P
Sbjct: 61 KDVLRTMPSF-DAVVTTGGGLPMAAENRAYMAEHGTVVFLHCPLEVIFERLE--GDETRP 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAA 255
L D + F A R Y N D V+ AA
Sbjct: 118 LFDAQKKEEMISLFQA-------RLPHYQNCDLEVNTGGHAA 152
>gi|398354903|ref|YP_006400367.1| shikimate kinase AroK [Sinorhizobium fredii USDA 257]
gi|390130229|gb|AFL53610.1| shikimate kinase AroK [Sinorhizobium fredii USDA 257]
Length = 195
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 10/159 (6%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L + L +G+MG+GK+ +G + + AL F DSD +E++ +V+++F GE F
Sbjct: 19 ALGKRNLIFIGLMGAGKSAIGRLTAQALGVPFVDSDHEIERV-SRMTVSELFAAYGEEEF 77
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGT 209
R E++ L++L +VV+TGGGA + + R +R+ G+TV+LN LD L R+
Sbjct: 78 RALEARVLKRLLRSGPRVVSTGGGAYINERSRRQIRKGGLTVWLNADLDVLWERVNK--R 135
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
D+ PLL ++ L L + R YA AD V
Sbjct: 136 DTRPLLKTENPRQ------TLENLMRARYPIYAEADLVV 168
>gi|393782377|ref|ZP_10370561.1| shikimate kinase [Bacteroides salyersiae CL02T12C01]
gi|392673205|gb|EIY66668.1| shikimate kinase [Bacteroides salyersiae CL02T12C01]
Length = 175
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + L+ F D D Y+E+ T V ++F E GEA FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARKLNLPFVDLDWYMEERFHKT-VGELFVERGEAGFRELEKN 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
L ++ V++TGGGA N FM R G TVFLNV D L RR+ V P+L
Sbjct: 63 MLHEVGAFEDVVISTGGGAPCFFDNMDFMNRNGKTVFLNVHPDVLFRRL-RVAKQQRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
D K F + AL K R+ Y+ A
Sbjct: 122 Q-GKQDDELKEFI-IRALEK-RTPFYSQA 147
>gi|397690465|ref|YP_006527719.1| shikimate kinase [Melioribacter roseus P3M]
gi|395811957|gb|AFN74706.1| shikimate kinase [Melioribacter roseus P3M]
Length = 182
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 18/195 (9%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
++L G M SGK+TVG IL++ L F D D+ + K G S+ IF++ GE+YFR+ E+
Sbjct: 2 IIYLTGFMTSGKSTVGPILANVLGLDFYDLDEEIVK-REGMSIVDIFEQKGESYFRKVET 60
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPL 214
+ L+++S +++ GGG + N +FM++ G V+L V + L RR+ TD
Sbjct: 61 RLLKEISNNDDVIISLGGGTITIDENLKFMKENGFIVYLKVDNETLYRRLKN-KTDRPLF 119
Query: 215 LDYDSADSYTKAFTA-LSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAME 273
D ++ + F ++ L +RS Y AD T+ C D P + ++
Sbjct: 120 KDLVMNENGKEEFIKRINNLLDKRSRYYEQADLTIE------C-------DSRPVGLTVD 166
Query: 274 VLVQA-QKYLNSKRR 287
+ Q+ Q+ +N K +
Sbjct: 167 RIAQSIQRKINEKNK 181
>gi|302871544|ref|YP_003840180.1| shikimate kinase [Caldicellulosiruptor obsidiansis OB47]
gi|302574403|gb|ADL42194.1| Shikimate kinase [Caldicellulosiruptor obsidiansis OB47]
Length = 172
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 87/156 (55%), Gaps = 10/156 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L G MGSGKTT+G+++++ LD D+D V K +G T + +IF+ GE FRE E
Sbjct: 2 KNIVLTGFMGSGKTTIGKLIAEKLDIELIDTDSEVIKELGMT-IDKIFEVYGEKKFREVE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+ ++++S + V++TGGG V+ P N + +R+ G+ FL +++ +R+ D+ P
Sbjct: 61 TMVIERVSKLENVVISTGGGVVLNPENVKLLRENGVIYFLYASAESILKRLK--DDDTRP 118
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL + D + L+ R Y N D ++
Sbjct: 119 LL--KNGDKLSNIIRLLNM----RMPFYKNCDFEIN 148
>gi|313895364|ref|ZP_07828921.1| shikimate kinase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312976259|gb|EFR41717.1| shikimate kinase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 173
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 85/154 (55%), Gaps = 9/154 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKT+VG +L+ L F D DK +E+ G T + ++F GE YFR E +
Sbjct: 4 IVLIGFMGTGKTSVGRLLAARLGCAFHDLDKKIEEAHGMT-IPEMFVRHGEPYFRAREKE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A+ + VVATGGG V N R +R+ GI V L +D + R AA G P+L
Sbjct: 63 AVAAAAARGNLVVATGGGVVKDAENMRALRKNGIIVALTADVDTILARTAARG--ERPVL 120
Query: 216 DY-DSADSYTKAFTALSALSKERSEAYANADATV 248
D D+ D A++AL +ER YA AD TV
Sbjct: 121 DRADAGDRR----AAVAALMEERRLLYAGADVTV 150
>gi|188580843|ref|YP_001924288.1| shikimate kinase, 3-dehydroquinate synthase [Methylobacterium
populi BJ001]
gi|179344341|gb|ACB79753.1| Shikimate kinase, 3-dehydroquinate synthase [Methylobacterium
populi BJ001]
Length = 579
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L + + LVG+MG+GK+TVG L+ L F D+D +E ++A IF GEA FR
Sbjct: 23 LGARSIVLVGLMGAGKSTVGRRLASRLGLMFKDADHEIEA-AAKLTIADIFAIYGEASFR 81
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVR-PLNWRFMRQGITVFLNVPLDALARRIAAVGTD 210
E E + + +L V+ATGGGA +R R GI+V+L LD L RR+ +
Sbjct: 82 EGEERVIARLLREGPMVLATGGGAFMREATRARIADGGISVWLKADLDVLMRRVRK--RN 139
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
+ PLL + ++ + AL + R YA AD TV
Sbjct: 140 TRPLLQTEDPEATMR------ALMEVRHPVYAQADVTV 171
>gi|383815105|ref|ZP_09970521.1| shikimate kinase II [Serratia sp. M24T3]
gi|383296117|gb|EIC84435.1| shikimate kinase II [Serratia sp. M24T3]
Length = 174
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F++G G+GKTTVG L+ AL Y F D+D Y+ + SVA+I G + FR E
Sbjct: 3 QPIFMIGARGAGKTTVGRALAQALGYDFVDTDIYLLQ-TSQLSVAEIVAREGWSGFRRRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
++ALQ +S P VVATGGG ++ N FMR+ G ++L P LA R+
Sbjct: 62 TQALQNIS-APHTVVATGGGVILAEENRLFMREKGQVIYLRSPASTLAHRL 111
>gi|317133564|ref|YP_004092878.1| shikimate kinase [Ethanoligenens harbinense YUAN-3]
gi|315471543|gb|ADU28147.1| Shikimate kinase [Ethanoligenens harbinense YUAN-3]
Length = 181
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L G MGSGK++VG L+ F D D+Y+EK + IF E GE YFR+ ES
Sbjct: 4 VVLCGFMGSGKSSVGAALAALTGARFVDMDRYIEK-QENKRIPAIFHEKGEGYFRQLESL 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A LS Q++ATGGGAV+R N + R G+ V L+VPL + RR+ G S PLL
Sbjct: 63 AAAALSKESGQIIATGGGAVMRAENVQAFRSGGVIVLLDVPLHVVQRRLR--GDRSRPLL 120
Query: 216 D 216
+
Sbjct: 121 N 121
>gi|430005369|emb|CCF21170.1| shikimate kinase I [Rhizobium sp.]
Length = 197
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 10/160 (6%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L + L VG+MG+GK+ +G++++ AL F D+D +EK+ ++A++F GE
Sbjct: 19 AALGKRNLVFVGLMGAGKSVIGKMVAQALSIPFVDTDGEIEKV-SRMTIAELFASYGEPE 77
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVG 208
FR E++ + +L +V++TGGGA + R ++Q GI+V+L LD L R+
Sbjct: 78 FRALEARVIDRLLKGGPRVISTGGGAFINDNTRRLIKQGGISVWLKADLDVLWERVNK-- 135
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
D PLL ++ + L L R YA AD TV
Sbjct: 136 RDHRPLLKTENPKA------TLENLMNHRYPIYAEADLTV 169
>gi|218510607|ref|ZP_03508485.1| shikimate kinase [Rhizobium etli Brasil 5]
Length = 241
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 13/169 (7%)
Query: 81 LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQ 140
LK + R + L + L LVG+MG+GK++VG I++ L F DSD +E++ ++A+
Sbjct: 57 LKDRAR---AALGSRNLILVGLMGAGKSSVGRIVASQLGIPFIDSDHEIERV-SRMTIAE 112
Query: 141 IFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDA 199
+F GE FR E++ +++L +VV+TGGGA V R + R G++V+L LD
Sbjct: 113 LFAAYGEDEFRALETRVIKRLLKSGPRVVSTGGGAFVNERTRRHIKRGGLSVWLKADLDV 172
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
L R+ D+ PLL ++ L L R YA AD TV
Sbjct: 173 LWERVNK--RDTRPLLKTENPKQ------TLENLMNARYPIYAQADLTV 213
>gi|317052000|ref|YP_004113116.1| Shikimate kinase [Desulfurispirillum indicum S5]
gi|316947084|gb|ADU66560.1| Shikimate kinase [Desulfurispirillum indicum S5]
Length = 168
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L G MGSGK+TVG ILS L F D D +EK G + IF + EAYFRE E++
Sbjct: 5 IILSGFMGSGKSTVGRILSRRLSLPFHDVDDVIEK-QTGMKIMDIFSQHSEAYFRELETR 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
L+ + P V+ATGGG ++ P N + QG+ +L+ L R+ + PL+
Sbjct: 64 VLRDILATPPSVIATGGGTLMEPENLTLSKQQGVLFYLSASAKTLHERVRH--SQHRPLV 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLA 254
S + A + L + R Y D + N++
Sbjct: 122 KKHS------SLEAFARLLEARIPFYKKCDYIIDADNMS 154
>gi|406036782|ref|ZP_11044146.1| shikimate kinase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 186
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G T + IF++ GEA FR E+
Sbjct: 18 IYLVGPMGAGKTTVGRHLAELLGRDFLDSDHEIERKTGAT-IPWIFEKEGEAGFRLRETN 76
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L +L+ V+ATGGGAV + N F++Q GI V+L P++ +R + PLL
Sbjct: 77 VLNELTTRSALVLATGGGAVTQSANREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL 134
Query: 216 DYDSADSYTKA-FTALSALSKE 236
++ + + TA L +E
Sbjct: 135 QVENPEQKLRELLTARDPLYRE 156
>gi|344940815|ref|ZP_08780103.1| Shikimate kinase [Methylobacter tundripaludum SV96]
gi|344262007|gb|EGW22278.1| Shikimate kinase [Methylobacter tundripaludum SV96]
Length = 174
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 4/134 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG+MG+GKTT+G L+ AL F DSDK +E+ G + IF+ GE FR+ E K
Sbjct: 7 IYLVGLMGAGKTTIGRQLARALKLPFYDSDKAIEE-RTGVDIPTIFEFEGEEGFRDREQK 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+Q+L+ + V+ATGGGA++R N R +++ G V+L ++ + R PLL
Sbjct: 66 MIQQLTQMEGIVLATGGGAILREENRRLLKENGFIVYLQCSVERILERTRR--DTQRPLL 123
Query: 216 DYDSADSYTKAFTA 229
D+ ++ A
Sbjct: 124 KTDNPRDRIESLFA 137
>gi|119899934|ref|YP_935147.1| shikimate kinase [Azoarcus sp. BH72]
gi|119672347|emb|CAL96261.1| probable shikimate kinase [Azoarcus sp. BH72]
Length = 178
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
CL L+GMMG+GKTTVG L+ F D D + G S+ IF+ GEA FR E+
Sbjct: 5 CLILIGMMGAGKTTVGRELAKRRGMRFVDCDHEIVARTG-VSIPTIFEIEGEAGFRRREA 63
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPL 214
+ + +L+ + ++ATGGG V+ P N + Q GI V+LNVP L R + PL
Sbjct: 64 QTIDELTREGELILATGGGVVLDPANRALLAQRGIVVYLNVPPHILWERTRH--DRNRPL 121
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYAN-ADATV 248
L ++ + L KER Y AD V
Sbjct: 122 LQVENPRQR------IEQLHKERDPLYREVADIIV 150
>gi|320529773|ref|ZP_08030851.1| shikimate kinase [Selenomonas artemidis F0399]
gi|320138012|gb|EFW29916.1| shikimate kinase [Selenomonas artemidis F0399]
Length = 173
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 84/154 (54%), Gaps = 9/154 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKT+VG +L+ L F D DK +E+ G T + ++F GE YFR E +
Sbjct: 4 IVLIGFMGTGKTSVGRLLAARLGCAFHDLDKKIEEAHGMT-IPEMFVRHGEPYFRAREKE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A+ + VVATGGG V N R +R+ GI V L +D + R AA G P+L
Sbjct: 63 AVAAAAARGNLVVATGGGVVKDAENMRALRKNGIIVALTADIDTILARTAARG--QRPVL 120
Query: 216 DY-DSADSYTKAFTALSALSKERSEAYANADATV 248
D D D A++AL +ER YA AD TV
Sbjct: 121 DRADEGDRR----AAVAALMEERRLLYAGADVTV 150
>gi|311109531|ref|YP_003982384.1| shikimate kinase [Achromobacter xylosoxidans A8]
gi|310764220|gb|ADP19669.1| shikimate kinase [Achromobacter xylosoxidans A8]
Length = 213
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVGMMG+GKTT+G L+ AL F D D +E G V IF+ GEA FR ES
Sbjct: 44 VFLVGMMGAGKTTIGRGLARALGREFMDLDHELEARCG-VRVPVIFEIEGEAGFRRRESA 102
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARR 203
AL++ + ++ATGGGA++ P N R +GI V+L +D L RR
Sbjct: 103 ALEECTQRRNIILATGGGAILAPENRQRLHERGIVVYLRASVDELFRR 150
>gi|237756169|ref|ZP_04584738.1| shikimate kinase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691676|gb|EEP60715.1| shikimate kinase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 166
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 28/189 (14%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ ++LVG MGSGK+TVG+IL++ L+ F D DK++E+ G + IF++ GE+YFRE E
Sbjct: 2 KNIYLVGFMGSGKSTVGKILAEKLNMNFIDIDKFIEE-KEGMKIKDIFEQKGESYFRELE 60
Query: 155 SKALQKLSLVPQQ--VVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS 211
K ++ ++V Q+ VV+TGGG N M++ G V+L+V L+ + R+
Sbjct: 61 RKQIE--AIVNQEGLVVSTGGGLGANLDNMNLMKKNGDVVWLDVSLNTVLDRLK--NDQD 116
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIA 271
PLL + + L +ER Y L N+ K TP+ I
Sbjct: 117 RPLLKQPTE--------KIKQLFEERKNVY-------RLANIRINADKK-----TPSQIV 156
Query: 272 MEVLVQAQK 280
E+L + ++
Sbjct: 157 EEILTKIKR 165
>gi|152966958|ref|YP_001362742.1| shikimate kinase [Kineococcus radiotolerans SRS30216]
gi|151361475|gb|ABS04478.1| Shikimate kinase [Kineococcus radiotolerans SRS30216]
Length = 203
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVG MG+GKTTVG +L+ L F D+D VE G V +IF GEA FR+ E
Sbjct: 2 IVLVGFMGAGKTTVGRLLATRLGLPFVDTDHVVEA-RAGRPVREIFTTDGEATFRDLEQA 60
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
A++++ PQ VV+ GGGA R +R+ + V L+V L + RR A G S P+L
Sbjct: 61 AVEEVLAGPQAVVSLGGGACGREATREVLREHVVVHLDVSLPEVRRRTA--GDVSRPVL 117
>gi|425743417|ref|ZP_18861499.1| shikimate kinase 1 [Acinetobacter baumannii WC-323]
gi|425494282|gb|EKU60495.1| shikimate kinase 1 [Acinetobacter baumannii WC-323]
Length = 180
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 77/135 (57%), Gaps = 4/135 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G T + IF++ GE FR E+
Sbjct: 12 IYLVGPMGAGKTTVGRHLAELLGRDFIDSDHEIERKTGAT-IPWIFEKEGEVGFRLRETN 70
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L L+ P V+ATGGGAV + N F++Q GI V+L P++ +R + PLL
Sbjct: 71 VLNDLTSRPLLVLATGGGAVTQVKNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL 128
Query: 216 DYDSADSYTKAFTAL 230
++ + + AL
Sbjct: 129 QVENPEQKLRDLLAL 143
>gi|312622092|ref|YP_004023705.1| shikimate kinase [Caldicellulosiruptor kronotskyensis 2002]
gi|312202559|gb|ADQ45886.1| Shikimate kinase [Caldicellulosiruptor kronotskyensis 2002]
Length = 172
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 85/154 (55%), Gaps = 10/154 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L G MG GKTT+G+++++ LD D+D V K G T + +IF+ GE FRE E++
Sbjct: 4 IVLTGFMGCGKTTIGKLIAEKLDIELIDTDSEVIKEFGMT-IDKIFEVHGEKKFREVETR 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
++++S + V++TGGG V+ P N + +R+ G+ FL +++ +R+ D+ PLL
Sbjct: 63 VIERVSKLENVVISTGGGVVLNPENVKLLRENGVIYFLYASAESILKRLK--DDDTRPLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVS 249
+ D + L+ R Y N D ++
Sbjct: 121 --KNGDKLSNIIRLLNM----RMPFYKNCDFEIN 148
>gi|291616498|ref|YP_003519240.1| AroL [Pantoea ananatis LMG 20103]
gi|291151528|gb|ADD76112.1| AroL [Pantoea ananatis LMG 20103]
Length = 191
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 13/134 (9%)
Query: 72 CDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEK 131
CD L G + L +FL+G G GKTT+GE LS AL Y F D+D +++
Sbjct: 7 CDGLRGG----------GTALMSLSIFLIGARGCGKTTIGEALSHALGYAFRDTDHHLQ- 55
Query: 132 LMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GIT 190
+VA+I G FR E+ +L+ ++ P ++ATGGG V+ N R+MR+ G
Sbjct: 56 FTTQRTVAEIVAAEGWESFRARETDSLKAVT-APSTIIATGGGMVLAEGNRRYMREHGQV 114
Query: 191 VFLNVPLDALARRI 204
++L+ P D LARR+
Sbjct: 115 IWLSAPPDILARRL 128
>gi|262193578|ref|YP_003264787.1| 3-dehydroquinate synthase [Haliangium ochraceum DSM 14365]
gi|262076925|gb|ACY12894.1| 3-dehydroquinate synthase [Haliangium ochraceum DSM 14365]
Length = 551
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G M +GK+TVG L+ L F D D VE G T VA IF GE FR E
Sbjct: 5 VFLTGFMATGKSTVGRQLAARLRRPFLDLDDAVEAEAGHT-VADIFASEGEIGFRRRERA 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
ALQ+++ P V+ATGGGA N MR+ G+T+ L PL A AR A G PLL
Sbjct: 64 ALQRIADGPAAVIATGGGAACHGDNLAQMRRSGLTIALTAPL-ATARARADAGERERPLL 122
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
A+ L AL + R Y A A V
Sbjct: 123 RATEAE--------LEALYRSREPMYRQAHACV 147
>gi|340028601|ref|ZP_08664664.1| shikimate kinase [Paracoccus sp. TRP]
Length = 178
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 10/154 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GMMG+GKT +G L+ L+ F D+D +E+ S+ +IF GE +FR ES+
Sbjct: 5 IVLIGMMGAGKTAIGGELARRLNRPFHDTDAEIER-AAAMSIPEIFARDGEEFFRARESE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNW-RFMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
L+++ +V+TGGGA +RP N R + G+ V+L+ L+ L R+ T PLL
Sbjct: 64 VLRRVLSSGPGIVSTGGGAWLRPENRGRIAQDGVAVWLDCDLETLWHRVRHRPTR--PLL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVS 249
+AD L L ERS YA AD V
Sbjct: 122 --QTADPR----GTLERLLTERSPVYALADIRVP 149
>gi|386815568|ref|ZP_10102786.1| shikimate kinase [Thiothrix nivea DSM 5205]
gi|386420144|gb|EIJ33979.1| shikimate kinase [Thiothrix nivea DSM 5205]
Length = 180
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 87/168 (51%), Gaps = 11/168 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVG+MG+GK+T+G L+ L+ F DSDK +E+ G S+ IF GE FR+ E +
Sbjct: 5 IILVGLMGAGKSTIGRQLARRLNLEFYDSDKVIEERTG-VSIPTIFAIEGEQGFRDREEQ 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+++L +P ++ATGGG+V+R N ++ G ++L D L +RI + PL+
Sbjct: 64 IIEELCALPGILLATGGGSVLRETNRAHIKAGGCVIYLRASADQLFQRIKH--DKNRPLM 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACIGLKDV 262
D K L L K R Y AD V A I L+D+
Sbjct: 122 QTD------KPLQTLRDLLKAREPLYMEVADLIVPTGKQKANIILRDI 163
>gi|86359409|ref|YP_471301.1| shikimate kinase [Rhizobium etli CFN 42]
gi|86283511|gb|ABC92574.1| shikimate kinase protein [Rhizobium etli CFN 42]
Length = 195
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 13/169 (7%)
Query: 81 LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQ 140
LK + R + L + L LVG+MG+GK++VG I++ L F DSD +E++ ++A+
Sbjct: 12 LKDRAR---AALGSRNLVLVGLMGAGKSSVGRIVASQLGIPFIDSDHEIERV-SRMTIAE 67
Query: 141 IFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDA 199
+F GE FR E++ +++L +VV+TGGGA + R +++ G++++L LD
Sbjct: 68 LFAAYGEEEFRALETRVMKRLLKSGPRVVSTGGGAFINGRTRRHIKKGGLSIWLKADLDV 127
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
L R+ D+ PLL ++ L L R YA AD TV
Sbjct: 128 LWERVNK--RDTRPLLKTENPKQ------TLENLMNARYPIYAQADLTV 168
>gi|187476587|ref|YP_784611.1| shikimate kinase [Bordetella avium 197N]
gi|114151679|sp|Q2L1Z2.1|AROK_BORA1 RecName: Full=Shikimate kinase; Short=SK
gi|115421173|emb|CAJ47661.1| shikimate kinase I [Bordetella avium 197N]
Length = 209
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVGMMG+GKTT+G L+ AL F D D +E G V IF+ GEA FR+ ES
Sbjct: 40 IFLVGMMGAGKTTIGRGLARALGREFIDLDHELEARCG-VRVPVIFEIEGEAGFRKREST 98
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
ALQ+ + ++ATGGGAV+ N R +R+ GI ++L +D L RR
Sbjct: 99 ALQECTQRRGIILATGGGAVLAEENRRLLRERGIVLYLRASVDELFRR 146
>gi|432371164|ref|ZP_19614228.1| shikimate kinase 2 [Escherichia coli KTE11]
gi|430900377|gb|ELC22396.1| shikimate kinase 2 [Escherichia coli KTE11]
Length = 174
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFL+G G GKTTVG L+D+L+Y F D+D++++ + T VA+I + + FR E
Sbjct: 3 QPLFLIGPRGCGKTTVGMALADSLNYRFVDTDQWLQSQLNMT-VAEIVEREEWSGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
+ AL+ ++ P V+ATGGG ++ N +MR GI V+L P+ L R+ A
Sbjct: 62 TAALEAVT-APSTVIATGGGIILTEFNRHYMRNNGIVVYLCAPVAVLVNRLQA 113
>gi|414169095|ref|ZP_11424932.1| shikimate kinase [Afipia clevelandensis ATCC 49720]
gi|410885854|gb|EKS33667.1| shikimate kinase [Afipia clevelandensis ATCC 49720]
Length = 204
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 84/164 (51%), Gaps = 9/164 (5%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
++ + L G+ + LVGMMGSGK+T+G L L F D+D +E G SV++IF + G
Sbjct: 17 DIVAALHGRPVVLVGMMGSGKSTIGRRLGARLHMPFLDADHEIEVAHAGMSVSEIFAQHG 76
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVR-PLNWRFMRQGITVFLNVPLDALARRIA 205
E YFR+ E++ + +L V+ATGGGA +R R + ++++L D + +R+
Sbjct: 77 EPYFRDGEARVIARLLEGGSCVIATGGGAFMREETRNRIHDKAVSIWLKADGDVILKRVK 136
Query: 206 AVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
PLL + + A ERS Y AD V+
Sbjct: 137 RRA--DRPLLQTPDPAATIERLIA------ERSPFYQFADLAVA 172
>gi|238025977|ref|YP_002910208.1| Shikimate kinase [Burkholderia glumae BGR1]
gi|237875171|gb|ACR27504.1| Shikimate kinase [Burkholderia glumae BGR1]
Length = 201
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F VG+MG+GKTTVG ++ LD F DSD +E G T + IF+ GE FR+ E K
Sbjct: 27 VFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEARTG-TRIPVIFELEGETGFRDREEK 85
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLN 194
+ +L+L V+ATGGGAV+RP N +R +GI ++L
Sbjct: 86 MIHELTLRGNVVLATGGGAVMRPANRDALRSRGIVIYLR 124
>gi|288553367|ref|YP_003425302.1| shikimate kinase [Bacillus pseudofirmus OF4]
gi|288544527|gb|ADC48410.1| shikimate kinase [Bacillus pseudofirmus OF4]
Length = 166
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 12/150 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++L G MGSGKTTVG+ L AL Y D+D+++E+ + +IF E GE FR E+
Sbjct: 5 IYLTGFMGSGKTTVGQALGKALGYQVIDTDQWIEEDQ-QKKIKEIFNEGGEKLFRSLETA 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
AL++L+ + V+ TGGG +++ N + M+ G +FL+ ++ + RR + DS PLL
Sbjct: 64 ALRELT-QKKAVITTGGGIILKEENRQIMKGSGTVIFLDCAIEEVIRRTS--NDDSRPLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANAD 245
S + ++ ++R Y AD
Sbjct: 121 KEKSKGD-------IQSMYEDRLPLYKEAD 143
>gi|385809403|ref|YP_005845799.1| shikimate kinase [Ignavibacterium album JCM 16511]
gi|383801451|gb|AFH48531.1| Shikimate kinase [Ignavibacterium album JCM 16511]
Length = 183
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 93/183 (50%), Gaps = 16/183 (8%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+FL G M SGK+T+G IL++ + + F D DK +E+ + +IFKE GE YFR+ ES
Sbjct: 5 LIFLTGFMASGKSTIGPILANTIGWDFLDLDKVIEE-KTNKKIVEIFKEYGEEYFRKLES 63
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPL 214
+ L++L+ + + V++ GGG + N M++ GI V+L + RR+ D L
Sbjct: 64 ETLKELTKLSKYVISLGGGTIENEDNLNQMKKSGILVYLETSPEGAYRRL-RFKRDRPAL 122
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEV 274
L D+ + + ++ + R + Y AD ++ D P I +++
Sbjct: 123 LFDDNEPTKEEFLKRINTILNRRLKYYNQADLKIN-------------TDNKPVGITVDI 169
Query: 275 LVQ 277
LV+
Sbjct: 170 LVK 172
>gi|395789009|ref|ZP_10468539.1| shikimate kinase [Bartonella taylorii 8TBB]
gi|395431143|gb|EJF97170.1| shikimate kinase [Bartonella taylorii 8TBB]
Length = 210
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
++ S LD + L LVG+MG+GK+ +G+ ++ L F DSD+ +EK ++ ++F+ G
Sbjct: 17 QLLSTLDKRALVLVGLMGAGKSVIGKRVATILHLPFYDSDQEIEK-AANMTITELFETYG 75
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVV-RPLNWRFMRQGITVFLNVPLDALARRIA 205
E FR E + + L V+ATGGGA + + + + GI+++L V LD L +R++
Sbjct: 76 EPEFRALEQRVILNLIKKKPLVLATGGGAYINQDIRKAIHQNGISIWLKVDLDILMKRVS 135
Query: 206 AVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
T PLL ++ + L ++R YA A+ T++
Sbjct: 136 RRPTR--PLLQTENPKE------TMKKLMEQRYPIYAKANLTIN 171
>gi|332800385|ref|YP_004461884.1| shikimate kinase [Tepidanaerobacter acetatoxydans Re1]
gi|438003764|ref|YP_007273507.1| Shikimate kinase I [Tepidanaerobacter acetatoxydans Re1]
gi|332698120|gb|AEE92577.1| Shikimate kinase [Tepidanaerobacter acetatoxydans Re1]
gi|432180558|emb|CCP27531.1| Shikimate kinase I [Tepidanaerobacter acetatoxydans Re1]
Length = 171
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 80/146 (54%), Gaps = 13/146 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GM GSGKT++G IL+ ++ F D D+Y+E+ G + +IF GE +FR ES
Sbjct: 8 IVLIGMPGSGKTSIGRILAKKINMCFYDLDEYIER-KSGKRITEIFAIYGERHFRTLESC 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
A++++S V++TGGG V+ N + ++GI F+N P++ +A I PLL
Sbjct: 67 AVKEISSKTNAVISTGGGVVLDSKNMHVLNKRGIIFFINRPVEDIANDIE---ISCRPLL 123
Query: 216 DYDSADSYTKAFTALSALSKERSEAY 241
D + Y L K+R E Y
Sbjct: 124 ANDRDNIYR--------LYKDRYELY 141
>gi|262405473|ref|ZP_06082023.1| shikimate kinase [Bacteroides sp. 2_1_22]
gi|294645215|ref|ZP_06722934.1| shikimate kinase [Bacteroides ovatus SD CC 2a]
gi|294809662|ref|ZP_06768352.1| shikimate kinase [Bacteroides xylanisolvens SD CC 1b]
gi|345510658|ref|ZP_08790222.1| shikimate kinase [Bacteroides sp. D1]
gi|423214842|ref|ZP_17201370.1| shikimate kinase [Bacteroides xylanisolvens CL03T12C04]
gi|229442680|gb|EEO48471.1| shikimate kinase [Bacteroides sp. D1]
gi|262356348|gb|EEZ05438.1| shikimate kinase [Bacteroides sp. 2_1_22]
gi|292639458|gb|EFF57757.1| shikimate kinase [Bacteroides ovatus SD CC 2a]
gi|294443147|gb|EFG11924.1| shikimate kinase [Bacteroides xylanisolvens SD CC 1b]
gi|392692105|gb|EIY85343.1| shikimate kinase [Bacteroides xylanisolvens CL03T12C04]
Length = 175
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + +D F D D Y+E+ T V ++F E GE FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARQMDIPFVDLDWYIEERFHKT-VGELFTERGETGFRELERN 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
L +++ V++TGGGA N FM R G TVFL+V D L RR+ V P+L
Sbjct: 63 MLHEVAEFENVVISTGGGAPCFFDNMDFMNRTGKTVFLDVHPDVLFRRL-RVAKQQRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
D KAF + AL K R+ Y A
Sbjct: 122 Q-GKEDDELKAFI-VQALEK-RAPFYHQA 147
>gi|254467208|ref|ZP_05080619.1| shikimate kinase [Rhodobacterales bacterium Y4I]
gi|206688116|gb|EDZ48598.1| shikimate kinase [Rhodobacterales bacterium Y4I]
Length = 196
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 93/172 (54%), Gaps = 11/172 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + +VGMMG+GKT VG L+ L+ F DSD +E ++ +IF GE +FR+ E
Sbjct: 22 KTIVMVGMMGAGKTAVGRALAARLNVPFLDSDHEIEA-AANMTIPEIFARDGEPFFRQKE 80
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
+ + +L + V++TGGGA + N + +G++V+L+ LD L R+ D+ P
Sbjct: 81 RQVIARLLAEERGVLSTGGGAFLAQENREVITAKGVSVWLDAGLDVLWNRVRH--RDTRP 138
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKD-VLD 264
LL +AD Y L L ++R YA AD TV+ AA + D VLD
Sbjct: 139 LL--RTADPY----ATLRNLYEQRVPLYAKADLTVASDGQAAIETMVDRVLD 184
>gi|188996471|ref|YP_001930722.1| Shikimate kinase [Sulfurihydrogenibium sp. YO3AOP1]
gi|254806783|sp|B2V895.1|AROK_SULSY RecName: Full=Shikimate kinase; Short=SK
gi|188931538|gb|ACD66168.1| Shikimate kinase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 166
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 87/158 (55%), Gaps = 16/158 (10%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ ++LVG MGSGK+TVG+IL++ L+ F D DK +E+ G + IF++ GE+YFRE E
Sbjct: 2 KNIYLVGFMGSGKSTVGKILAEKLNMKFVDIDKLIEE-KEGMKIKDIFEQKGESYFRELE 60
Query: 155 SKALQKLSLVPQQ--VVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS 211
K ++ ++V Q+ VV+TGGG N M++ G V+L+V L+ + R+
Sbjct: 61 RKQIE--AIVNQEGLVVSTGGGLGANLNNMNLMKKNGDVVWLDVSLNTVLDRLK--NDQD 116
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
PLL + + L +ER Y A+ ++
Sbjct: 117 RPLL--------KQPIEKIKQLFEERKNVYRLANIRIN 146
>gi|424872594|ref|ZP_18296256.1| shikimate kinase [Rhizobium leguminosarum bv. viciae WSM1455]
gi|393168295|gb|EJC68342.1| shikimate kinase [Rhizobium leguminosarum bv. viciae WSM1455]
Length = 196
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 22/201 (10%)
Query: 81 LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQ 140
LK + R + L + L LVG+MG+GK++VG I++ L F DSD +E+ + ++A+
Sbjct: 12 LKDRAR---AALGSRNLILVGLMGAGKSSVGRIVASQLAIPFIDSDLEIER-VSRMTIAE 67
Query: 141 IFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDA 199
+F GE FR E++ +++L +VV+TGGGA + + +++ G++V+L LD
Sbjct: 68 LFAAYGEQEFRALEARVIKRLLKSGPRVVSTGGGAFINDRTRKHIKKGGLSVWLKADLDV 127
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL 259
L R+A D+ PLL ++ L L R YA AD TV ++ I
Sbjct: 128 LWDRVAK--RDTRPLLKTENPKQ------TLEGLMNARYPIYAQADLTVLSRDVRKEIMA 179
Query: 260 KDVLDITPTTIAMEVLVQAQK 280
+VL + L++AQK
Sbjct: 180 DEVL---------KALIEAQK 191
>gi|427406973|ref|ZP_18897178.1| hypothetical protein HMPREF9161_01538 [Selenomonas sp. F0473]
gi|425707448|gb|EKU70492.1| hypothetical protein HMPREF9161_01538 [Selenomonas sp. F0473]
Length = 173
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 82/154 (53%), Gaps = 9/154 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKTT+G +L+ L F D D+ +E+ GG S+ ++F GE YFR E +
Sbjct: 4 VVLIGFMGTGKTTIGRLLAGRLGCAFHDLDRKIEE-TGGMSIPEMFARYGEPYFRAREKE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A++ + VVATGGG V N +R+ GI V L +D + R A G P+L
Sbjct: 63 AVRAAAARGNLVVATGGGVVKDAENIAALRRSGIIVALTADVDTILARTARCG--ERPVL 120
Query: 216 D-YDSADSYTKAFTALSALSKERSEAYANADATV 248
D D+ D A+ +L +R Y AD TV
Sbjct: 121 DGADAGDRR----AAIESLLADRRHLYEGADITV 150
>gi|378768316|ref|YP_005196788.1| shikimater kinase II AroL [Pantoea ananatis LMG 5342]
gi|386014869|ref|YP_005933146.1| shikimater kinase II AroL [Pantoea ananatis AJ13355]
gi|386080447|ref|YP_005993972.1| shikimater kinase II AroL [Pantoea ananatis PA13]
gi|327392928|dbj|BAK10350.1| shikimater kinase II AroL [Pantoea ananatis AJ13355]
gi|354989628|gb|AER33752.1| shikimater kinase II AroL [Pantoea ananatis PA13]
gi|365187801|emb|CCF10751.1| shikimater kinase II AroL [Pantoea ananatis LMG 5342]
Length = 174
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G G GKTT+GE LS AL Y F D+D ++ + +VA+I G FR E+
Sbjct: 5 IFLIGARGCGKTTIGEALSHALGYAFRDTDHHL-QFTTQRTVAEIVAAEGWESFRARETD 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
+L+ ++ P ++ATGGG V+ N R+MR+ G ++L+ P D LARR+
Sbjct: 64 SLKAVT-APSTIIATGGGMVLAEGNRRYMREHGQVIWLSAPPDILARRL 111
>gi|52141265|ref|YP_085567.1| shikimate kinase [Bacillus cereus E33L]
gi|51974734|gb|AAU16284.1| shikimate kinase [Bacillus cereus E33L]
Length = 165
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ + IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELHMDVVDTDQKIEEKQ-EKEIRDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
SK L+ L V ++ TGGG + R N ++M++ GI V+L +A R+ T P
Sbjct: 61 SKMLRSLP-VENVIITTGGGIIEREENRKWMKENGIVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVTKFESRRAYYE---EAHIHIDTT 148
>gi|317121066|ref|YP_004101069.1| 3-dehydroquinate synthase [Thermaerobacter marianensis DSM 12885]
gi|315591046|gb|ADU50342.1| 3-dehydroquinate synthase [Thermaerobacter marianensis DSM 12885]
Length = 660
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 69/120 (57%), Gaps = 2/120 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVG+MG+GKTTVG L+ L + F D D +E+ G T VA +F GEA FR E +
Sbjct: 3 IVLVGLMGAGKTTVGRALAARLGWAFLDLDDLIEQEAGQT-VADLFAREGEAGFRTREEQ 61
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
AL + + V+ATGGGAV+ N R + +L P D LARR+A G + PLL
Sbjct: 62 ALATALTLERVVLATGGGAVLSARNRQRLAAEPWVFWLEAPPDELARRLAGPGAAARPLL 121
>gi|374993695|ref|YP_004969194.1| shikimate kinase [Desulfosporosinus orientis DSM 765]
gi|357212061|gb|AET66679.1| shikimate kinase [Desulfosporosinus orientis DSM 765]
Length = 177
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 12/153 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GK+TVG+ L+ +L + F D+D Y + SV++IF+ GE FR ES
Sbjct: 4 IVLIGFMGTGKSTVGKRLAQSLAWDFVDTD-YEIGAVTDLSVSEIFRRYGETRFRSEESI 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+ ++S + V+ATGGG + P NW + + G+ + L+ LDA+ RI + PLL
Sbjct: 63 VVDRISRQERLVIATGGGTALNPANWSALAENGVIIALHATLDAILARIGH--KNDRPLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
A+ L ER + YA AD V
Sbjct: 121 KGPK--------EAIEKLWIERQKCYAQADYIV 145
>gi|170767940|ref|ZP_02902393.1| shikimate kinase [Escherichia albertii TW07627]
gi|170123428|gb|EDS92359.1| shikimate kinase [Escherichia albertii TW07627]
Length = 203
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 74/123 (60%), Gaps = 4/123 (3%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFL+G G GKTTVG L+D+L+ F D+D++++ + T VA+I ++ A FR E
Sbjct: 3 QPLFLIGPRGCGKTTVGMALADSLNCRFVDTDQWLQSQLNMT-VAEIVEKEEWAGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRI-AAVGTDSF 212
+ AL+ ++ P V+ATGGG ++ N +MR GI V+L P+ L R+ AA D
Sbjct: 62 TAALEAVT-APSSVIATGGGIILTEFNRHYMRNNGIVVYLCAPVSVLVNRLQAAPEEDLR 120
Query: 213 PLL 215
P L
Sbjct: 121 PTL 123
>gi|255320221|ref|ZP_05361406.1| shikimate kinase [Acinetobacter radioresistens SK82]
gi|255302660|gb|EET81892.1| shikimate kinase [Acinetobacter radioresistens SK82]
Length = 183
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G ++ IF++ GEA FR E+
Sbjct: 12 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHELER-KTGANIPWIFEKEGEAGFRSRETA 70
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
+ +L+L + V+ATGGGAV + N F++Q GI V+L P++ +R
Sbjct: 71 VIDQLTLRQKLVLATGGGAVTQAPNREFLKQRGIVVYLYTPVEIQLQR 118
>gi|372467157|pdb|3VAA|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Shikimate
Kinase From Bacteroides Thetaiotaomicron
gi|372467158|pdb|3VAA|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Shikimate
Kinase From Bacteroides Thetaiotaomicron
gi|372467159|pdb|3VAA|C Chain C, 1.7 Angstrom Resolution Crystal Structure Of Shikimate
Kinase From Bacteroides Thetaiotaomicron
Length = 199
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + L+ F D D Y+E+ T V ++F E GEA FRE E
Sbjct: 28 IFLTGYMGAGKTTLGKAFARKLNVPFIDLDWYIEERFHKT-VGELFTERGEAGFRELERN 86
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRI 204
L +++ V++TGGGA N FM R G TVFLNV D L RR+
Sbjct: 87 MLHEVAEFENVVISTGGGAPCFYDNMEFMNRTGKTVFLNVHPDVLFRRL 135
>gi|298387883|ref|ZP_06997432.1| shikimate kinase [Bacteroides sp. 1_1_14]
gi|298259290|gb|EFI02165.1| shikimate kinase [Bacteroides sp. 1_1_14]
Length = 175
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 78/149 (52%), Gaps = 6/149 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + L+ F D D Y+E+ T V ++F E GEA FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARKLNIPFIDLDWYIEERFHKT-VGELFTERGEAGFRELERN 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
L +++ V++TGGGA N FM R G TVFLNV D L RR+ + P+L
Sbjct: 63 MLHEVAEFENVVISTGGGAPCFYDNMEFMNRTGKTVFLNVHPDVLFRRL-RIAKQQRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
D + AL K R+ Y A
Sbjct: 122 QGKEDDELMDFI--IQALEK-RAPFYTQA 147
>gi|29348802|ref|NP_812305.1| shikimate kinase [Bacteroides thetaiotaomicron VPI-5482]
gi|383124977|ref|ZP_09945636.1| shikimate kinase [Bacteroides sp. 1_1_6]
gi|81443466|sp|Q8A2B2.1|AROK_BACTN RecName: Full=Shikimate kinase; Short=SK
gi|29340708|gb|AAO78499.1| shikimate kinase [Bacteroides thetaiotaomicron VPI-5482]
gi|251840872|gb|EES68953.1| shikimate kinase [Bacteroides sp. 1_1_6]
Length = 175
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 78/149 (52%), Gaps = 6/149 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + L+ F D D Y+E+ T V ++F E GEA FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARKLNVPFIDLDWYIEERFHKT-VGELFTERGEAGFRELERN 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
L +++ V++TGGGA N FM R G TVFLNV D L RR+ + P+L
Sbjct: 63 MLHEVAEFENVVISTGGGAPCFYDNMEFMNRTGKTVFLNVHPDVLFRRL-RIAKQQRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
D + AL K R+ Y A
Sbjct: 122 QGKEDDELMDFI--IQALEK-RAPFYTQA 147
>gi|357385939|ref|YP_004900663.1| shikimate kinase [Pelagibacterium halotolerans B2]
gi|351594576|gb|AEQ52913.1| Shikimate kinase I [Pelagibacterium halotolerans B2]
Length = 197
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 10/178 (5%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
+V L G+ + LVGMMG+GKTTVG L++ L F DSD +E G S+ IF G
Sbjct: 16 QVLDALAGRPVVLVGMMGAGKTTVGRRLANRLGLPFTDSDAEIET-AAGMSIPDIFAAHG 74
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIA 205
E FR E++ + +L Q ++ATGGGA + P ++ +++++ D L R++
Sbjct: 75 EPEFRAGEARVISRLLREHQGIIATGGGAFINPETRDAIKTHAVSIWIKADFDLLFARVS 134
Query: 206 AVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVL 263
PLL L L +R YA AD TV+ ++ + + D+L
Sbjct: 135 K--RPGRPLLQTPDPRG------TLQGLIDKRYPVYALADLTVASRDVPHDVVVNDIL 184
>gi|384209708|ref|YP_005595428.1| shikimate kinase [Brachyspira intermedia PWS/A]
gi|343387358|gb|AEM22848.1| shikimate kinase [Brachyspira intermedia PWS/A]
Length = 175
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 13/150 (8%)
Query: 93 DGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFRE 152
+ + +F+VG+ G GK+ + ++L++ L+Y D D ++E G T + IF E+GE YFR
Sbjct: 6 NNKIIFIVGLPGCGKSALSKMLAEKLNYDLYDMDSFIEHKEGRT-ITNIFAENGEPYFRN 64
Query: 153 YESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDS 211
ES+ L++LS + V++TGGG V+ N M+ +G+T+F++ D + I
Sbjct: 65 IESEVLEELSNLNNAVISTGGGIVLAEKNRNIMKDKGLTIFIDRNPDIILENIDPTER-- 122
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAY 241
PLL D L LSK+R Y
Sbjct: 123 -PLLAKDK--------NKLLELSKQRDGLY 143
>gi|399992601|ref|YP_006572841.1| shikimate kinase AroK [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398657156|gb|AFO91122.1| shikimate kinase AroK [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 196
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 11/167 (6%)
Query: 83 AKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIF 142
A R V L + + +VGMMG+GKT VG L+ L F DSD +E T + +IF
Sbjct: 11 AGDRRVPGALK-KTIVMVGMMGAGKTAVGRALAARLQAPFLDSDHEIEAAANRT-IPEIF 68
Query: 143 KESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALA 201
GE +FR+ E + +++L + V++TGGGA + N + + +G+ ++LN L+ L
Sbjct: 69 ARDGEPFFRKKERQVIRRLLDEERGVLSTGGGAFLAEENRQIISERGVAIWLNADLEVLW 128
Query: 202 RRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
R+ D+ PLL + + LSAL +R YA AD TV
Sbjct: 129 NRVKH--RDTRPLLRTEDPHA------TLSALYHDRVPYYAQADLTV 167
>gi|118594317|ref|ZP_01551664.1| shikimate kinase [Methylophilales bacterium HTCC2181]
gi|118440095|gb|EAV46722.1| shikimate kinase [Methylophilales bacterium HTCC2181]
Length = 176
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 72/122 (59%), Gaps = 4/122 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G+MGSGKTT+G+I++ L F DSD +E+ G V IF+ GE FR+ E+
Sbjct: 8 IFLIGLMGSGKTTIGKIVAKKLQLNFMDSDVLIEE-KTGVKVPLIFEYEGEEGFRKREAS 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L +L++ V+ATGGG V+ N + + + G +L D LARR+A S PLL
Sbjct: 67 TLIELAIKNDMVLATGGGIVLLEENRKLLVESGWVFYLKAHTDELARRLA--NDKSRPLL 124
Query: 216 DY 217
+
Sbjct: 125 QH 126
>gi|390951135|ref|YP_006414894.1| shikimate kinase [Thiocystis violascens DSM 198]
gi|390427704|gb|AFL74769.1| shikimate kinase [Thiocystis violascens DSM 198]
Length = 174
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
+ Q +F+VG MG+GK+TVG LS++L YTF DSD+ +++ G + IF+ GE FR
Sbjct: 2 MRAQNIFIVGPMGAGKSTVGRQLSESLSYTFKDSDQEIQRRT-GVDIPTIFEFEGEEGFR 60
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNV-PLDALARRIAAVGT 209
E + +++L + V+ATGGGA++ P N + + +G+ ++L+ P AR
Sbjct: 61 NRERQVIEELVSEERIVLATGGGAILNPENRQNLSSRGVVIYLHCSPEQQYAR---TARD 117
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYAN-ADATVS 249
+ PLLD + L + +ER Y AD VS
Sbjct: 118 RNRPLLDTED------PLAKLREIMEEREPLYRQVADMVVS 152
>gi|218132872|ref|ZP_03461676.1| hypothetical protein BACPEC_00733 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991745|gb|EEC57749.1| shikimate kinase [[Bacteroides] pectinophilus ATCC 43243]
Length = 175
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKTTVG +S ++ + D+D Y+E T + IF GE +FR+ E+K
Sbjct: 7 IVLIGFMGAGKTTVGRWISQNVNMKYIDTDDYIEAGQNMT-IKDIFANYGEEFFRDLETK 65
Query: 157 ALQKL-SLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPL 214
AL++L Q V++ GGG VR +N + M++ G V+L + LARR+ G D P+
Sbjct: 66 ALEELCEGCSQTVISVGGGMPVRDINRKLMKKLGTVVYLKAAEEELARRLD--GDDKRPM 123
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYANA-DATVSLLNLA 254
L + K + L +R +AY +A D ++ + ++
Sbjct: 124 L---AGQDLRK---RIHELIMQREDAYLDASDVVINTMGMS 158
>gi|338997248|ref|ZP_08635949.1| shikimate kinase [Halomonas sp. TD01]
gi|338765845|gb|EGP20776.1| shikimate kinase [Halomonas sp. TD01]
Length = 188
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 4/126 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G MG+GK+T+G +L+ L +F DSD ++ G + IF GE FR+ ES+
Sbjct: 7 IFLIGPMGAGKSTIGRLLAAELSRSFFDSDHAIQDRCGA-DIPWIFDVEGEPGFRQRESQ 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+ +L+ +P VVATGGGAV+R N R +R+ G V+L +D +R A + PLL
Sbjct: 66 MIDELTQLPSVVVATGGGAVLREENRRALRERGTVVYLLTTVDQQLKRTAK--DRNRPLL 123
Query: 216 DYDSAD 221
D+ +
Sbjct: 124 QCDNRE 129
>gi|253575722|ref|ZP_04853057.1| shikimate kinase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844765|gb|EES72778.1| shikimate kinase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 169
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 85/155 (54%), Gaps = 15/155 (9%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GMMG+GKTTVG +L+ D D+ + + G S+ IF GEAYFR+ E+
Sbjct: 6 IVLIGMMGTGKTTVGSLLAAETGLKLVDLDQRI-AMEAGRSIPDIFAAEGEAYFRDLETA 64
Query: 157 ALQKLSLVPQQVV-ATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTD-SFP 213
AL++ +L Q +V ATGGGAV+R N MR G+ V L D + R VG D P
Sbjct: 65 ALRR-TLQEQGIVLATGGGAVLREENRLAMRDGGLVVALQATADEILVR---VGEDPGRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + + T AL +ER +AYA A TV
Sbjct: 121 LLAGGAKERIT-------ALLEERKDAYAFAHLTV 148
>gi|339503832|ref|YP_004691252.1| shikimate kinase [Roseobacter litoralis Och 149]
gi|338757825|gb|AEI94289.1| putative shikimate kinase [Roseobacter litoralis Och 149]
Length = 197
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 84/155 (54%), Gaps = 10/155 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + ++GMMG+GKT VG L+ LD F DSD +E+ SV +IF GEA+FR E
Sbjct: 21 KTIVMIGMMGAGKTAVGRALAQLLDVPFLDSDHEIEE-AANMSVPEIFARDGEAFFRARE 79
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
S+ + +L V++TGGGA + N + +G++V+L+ ++ L R+ D+ P
Sbjct: 80 SEVINRLLSGQACVLSTGGGAFLAEANRAAISARGVSVWLDADIELLWNRVK--HRDTRP 137
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + LSAL + R YA AD TV
Sbjct: 138 LLRTPDPKA------TLSALYETRVPEYAKADMTV 166
>gi|340785653|ref|YP_004751118.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Collimonas
fungivorans Ter331]
gi|340550920|gb|AEK60295.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Collimonas
fungivorans Ter331]
Length = 607
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 84/146 (57%), Gaps = 10/146 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG+MG+GKTTVG L+ L+ F DSD +E G S+ IF+ GE FR+ E++
Sbjct: 37 IFLVGLMGAGKTTVGRALAKKLNKLFIDSDHEIEARTG-VSIPLIFEIEGEESFRQRETE 95
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
++ LS V+ATGGGAV+RP N +++ +G ++L + + +R + + PLL
Sbjct: 96 VIRDLSGRRGIVLATGGGAVMRPENREYLKTRGTVIYLRASIHNILQRTSR--DKNRPLL 153
Query: 216 DYDSADSYTKAFTALSALSKERSEAY 241
+AD + L LS++R Y
Sbjct: 154 --QTADPRRR----LEELSRQREPYY 173
>gi|402303616|ref|ZP_10822707.1| shikimate kinase [Selenomonas sp. FOBRC9]
gi|400378231|gb|EJP31092.1| shikimate kinase [Selenomonas sp. FOBRC9]
Length = 173
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 84/154 (54%), Gaps = 9/154 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKT+VG +L+ L F D DK +E+ G T + ++F GE YFR E +
Sbjct: 4 IVLIGFMGTGKTSVGRLLAARLGCAFHDLDKKIEEAHGMT-IPEMFVRHGEPYFRAREKE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A+ + VVATGGG V N R +R+ GI V L +D + R AA G P+L
Sbjct: 63 AVAAAAARGNLVVATGGGVVKDTENMRALRKNGIIVALTADVDTILARTAARG--ERPVL 120
Query: 216 DY-DSADSYTKAFTALSALSKERSEAYANADATV 248
D D D A++AL +ER YA AD TV
Sbjct: 121 DRADVGDRR----AAVAALMEERRLLYAGADVTV 150
>gi|114321908|ref|YP_743591.1| shikimate kinase [Alkalilimnicola ehrlichii MLHE-1]
gi|114228302|gb|ABI58101.1| shikimate kinase [Alkalilimnicola ehrlichii MLHE-1]
Length = 179
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 13/155 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++L+G MG+GK+TVG L+DAL F DSD+Y+ + G + IF GEA FR+ E
Sbjct: 7 IYLIGPMGAGKSTVGRRLADALGLPFEDSDRYIVERT-GVDIPTIFDIEGEAGFRKREHD 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTD-SFPL 214
A++ L+ + V+ATGGG V P N + +GI V+L P++ ++A G D + PL
Sbjct: 66 AIRTLTEREELVLATGGGVVTTPANRDLLGARGIVVYLYTPVET---QLARTGKDRNRPL 122
Query: 215 LDYDSADSYTKAFTALSALSKERSEAY-ANADATV 248
L + + L AL ER Y A AD +
Sbjct: 123 LQTEDPRAR------LEALMVERDPLYRAIADIII 151
>gi|421843777|ref|ZP_16276937.1| shikimate kinase II [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411775498|gb|EKS58944.1| shikimate kinase II [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|455641857|gb|EMF21028.1| shikimate kinase II [Citrobacter freundii GTC 09479]
Length = 181
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFLVG G GKTT G L+ A+D+ F D+D++++ + T VA+I + G FR E
Sbjct: 3 QPLFLVGPRGCGKTTTGMALAKAIDFQFVDTDRWLQSHVQMT-VAEIVEREGWEGFRAQE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
+ ALQ ++ P VVATGGG ++ N +MR G+ ++L+ P+ L R+ A
Sbjct: 62 TTALQAVT-APATVVATGGGIILTEFNRHYMRSHGVVIYLSAPVSVLVDRLEA 113
>gi|414154644|ref|ZP_11410961.1| Shikimate kinase [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411453475|emb|CCO08865.1| Shikimate kinase [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 175
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 10/154 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GK+TVG L+ L Y F D+D +E++ G T V QIF++ G FR E
Sbjct: 4 IVLIGFMGTGKSTVGRALAKRLGYRFIDTDYAIEQITGLT-VEQIFRKHGVKRFRGEEVL 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+KL+ V+ATGGG V+ P N + +RQ G V L + + RR+ T PLL
Sbjct: 63 LARKLAAQENLVIATGGGMVLDPENVKMLRQNGFLVCLAASSETICRRVRNKRTR--PLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVS 249
+ +++L +ER AY AD TV+
Sbjct: 121 ------ARGNLHRRVASLLEERKGAYQTADFTVN 148
>gi|260890230|ref|ZP_05901493.1| shikimate kinase [Leptotrichia hofstadii F0254]
gi|260859850|gb|EEX74350.1| shikimate kinase [Leptotrichia hofstadii F0254]
Length = 165
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM GK+T+G LS ++Y F D D+Y+E+ ++ IF GE YFRE E
Sbjct: 2 KNIVLIGMPACGKSTIGYWLSKKINYPFVDVDRYLEE-KENKIISDIFSNEGEEYFRELE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+K L++LS +++TGGGAV N +++ GI VFLN +D ++R + P
Sbjct: 61 TKYLKELSEKEGIIISTGGGAVKNKENIDILKENGIIVFLNRTIDDISRE----NHRNRP 116
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLL 251
LL + D+ K + L ++ ++ D ++ ++
Sbjct: 117 LL--QNPDNIRKLYDERIKLYRQYADIIIKNDDSMDVI 152
>gi|303256507|ref|ZP_07342521.1| shikimate kinase [Burkholderiales bacterium 1_1_47]
gi|331001158|ref|ZP_08324787.1| shikimate kinase [Parasutterella excrementihominis YIT 11859]
gi|302859998|gb|EFL83075.1| shikimate kinase [Burkholderiales bacterium 1_1_47]
gi|329569279|gb|EGG51065.1| shikimate kinase [Parasutterella excrementihominis YIT 11859]
Length = 182
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 93/190 (48%), Gaps = 30/190 (15%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVGMMG+GK+T+G+ L+ + F D D+ +E+ G S+ IF+ GEA FR E++
Sbjct: 10 IFLVGMMGAGKSTIGKALAALMGTKFVDLDRELEERCG-VSIPHIFETEGEAGFRCRETR 68
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR--QGITVFLNVPLDALARRIAAVGTDSFPL 214
LQ+ + VVATGGG V R N ++ + V L V + RR GTD PL
Sbjct: 69 LLQEYAKASDMVVATGGGVVTREENREILKASPAVAVHLKVSPEECFRRTQ--GTDR-PL 125
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEV 274
L AD K + L +ER Y ++V DI+ T M+
Sbjct: 126 L--QCADPMEK----ICRLLQERGPLY------------------EEVADISYETDGMKA 161
Query: 275 LVQAQKYLNS 284
AQ+ LNS
Sbjct: 162 ARAAQELLNS 171
>gi|240146558|ref|ZP_04745159.1| shikimate kinase [Roseburia intestinalis L1-82]
gi|257201289|gb|EEU99573.1| shikimate kinase [Roseburia intestinalis L1-82]
gi|291535692|emb|CBL08804.1| Shikimate kinase [Roseburia intestinalis M50/1]
Length = 266
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 78 KWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKY-VEKLMGGT 136
K+++K R A L +FL+G MG+GK+T+ L D L+ + D+ VEK G
Sbjct: 74 KYIMKNSRRIQAKSLFDYNIFLIGFMGAGKSTIAGELKDKLEMDRVEMDQMIVEK--QGM 131
Query: 137 SVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNV 195
S+++IF E GEAYFR ES L +L Q +V+ GGG V+R N M++ G V L
Sbjct: 132 SISEIFDEYGEAYFRNLESNTLIELQKRKQTIVSCGGGVVMREENTDHMKKNGRVVLLTA 191
Query: 196 PLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAY-ANADATVS 249
+ + R+ +D P+L+ + + +S L +R + Y A AD TV+
Sbjct: 192 KPETIYERVK--DSDERPILNNNMNVEF------ISGLMDKRKDRYEAVADITVA 238
>gi|440784955|ref|ZP_20961992.1| shikimate kinase [Clostridium pasteurianum DSM 525]
gi|440218605|gb|ELP57824.1| shikimate kinase [Clostridium pasteurianum DSM 525]
Length = 170
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ +GM GSGKTT+ + +S D+D+Y+EK G ++ IFK +GE YFR+ E++
Sbjct: 7 IVFIGMPGSGKTTIAKNISKRYGLQLYDTDEYIEK-KEGKIISDIFK-NGEEYFRKLETE 64
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
A++++S V++TGGG + N + + R GI VF+N PL+ + I V + PLL
Sbjct: 65 AIKEISSKEAVVISTGGGVIKSSYNMKLLKRNGIIVFINRPLEYI---IKDVDISNRPLL 121
Query: 216 DYDSADSYTKAFTALSALSKE 236
S D+ K + L KE
Sbjct: 122 S-QSRDNLHKLYKERYKLYKE 141
>gi|399036452|ref|ZP_10733522.1| shikimate kinase [Rhizobium sp. CF122]
gi|398065984|gb|EJL57590.1| shikimate kinase [Rhizobium sp. CF122]
Length = 195
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 13/169 (7%)
Query: 81 LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQ 140
LK + R + L + L LVG+MG+GK++VG I++ L F DSD +EK+ S+++
Sbjct: 12 LKDRAR---AALGSRNLILVGLMGAGKSSVGRIVAHQLGIPFVDSDAEIEKV-SRMSISE 67
Query: 141 IFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDA 199
+F GE FR ES+ +++L +VV+TGGGA + + +++ G++++L LD
Sbjct: 68 LFAAYGEEEFRALESRVMKRLLKNGPRVVSTGGGAFINDRTRKHIKKGGVSIWLKADLDV 127
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
L R++ D+ PLL ++ L +L R Y AD TV
Sbjct: 128 LWERVSK--RDTRPLLKTENPKQ------TLESLMNARYPIYELADLTV 168
>gi|237730356|ref|ZP_04560837.1| shikimate kinase II [Citrobacter sp. 30_2]
gi|226905895|gb|EEH91813.1| shikimate kinase II [Citrobacter sp. 30_2]
Length = 181
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFLVG G GKTT G L+ A+D+ F D+D++++ + T VA+I + G FR E
Sbjct: 3 QPLFLVGPRGCGKTTTGMALAKAIDFQFVDTDRWLQSHVQMT-VAEIVEREGWEGFRAQE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
+ ALQ ++ P VVATGGG ++ N +MR G+ ++L+ P+ L R+ A
Sbjct: 62 TTALQAVT-APATVVATGGGIILTEFNRHYMRSHGVVIYLSAPVSVLVDRLEA 113
>gi|366160673|ref|ZP_09460535.1| shikimate kinase II [Escherichia sp. TW09308]
Length = 174
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFL+G G GKTTVG L+D+L+Y F D+D++++ + T VA+I + FR E
Sbjct: 3 QPLFLIGPRGCGKTTVGMALADSLNYRFVDTDQWLQSQLNMT-VAEIVEREEWGGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
+ AL+ ++ P V+ATGGG ++ N +MR GI V+L P+ L R+ A
Sbjct: 62 TAALEAVT-APSTVIATGGGIILTEFNRHYMRNNGIVVYLCAPVAVLVNRLQA 113
>gi|384918293|ref|ZP_10018375.1| shikimate kinase [Citreicella sp. 357]
gi|384467778|gb|EIE52241.1| shikimate kinase [Citreicella sp. 357]
Length = 191
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 85/156 (54%), Gaps = 10/156 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVGMMG+GKT VG+ L+ AL F DSD +E S+A+IF+ GE +FR E
Sbjct: 15 KTVVLVGMMGAGKTAVGKALATALRVPFRDSDAEIES-AANMSIAEIFERDGEPFFRARE 73
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFP 213
++ + +L P V++TGGGA +R N + R+G+ V+L+ L L R+ T P
Sbjct: 74 TQIISRLLDGPPAVLSTGGGAYMRAENRDMITRRGVAVWLDAALPVLWNRVRHKSTR--P 131
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL + D + L + + R Y AD TV+
Sbjct: 132 LL--RTPDPH----ATLRDIYEARVPVYRLADLTVT 161
>gi|410665443|ref|YP_006917814.1| shikimate kinase [Simiduia agarivorans SA1 = DSM 21679]
gi|409027800|gb|AFV00085.1| shikimate kinase [Simiduia agarivorans SA1 = DSM 21679]
Length = 170
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GKTT+G++L+ L Y F D+D+ +E G + IF GEA FR+ E
Sbjct: 5 VFLVGPMGAGKTTIGKLLAQQLGYPFKDTDREIEDRTGA-DIPWIFDVEGEAGFRDREVA 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
L ++ QQV+ATGGG ++R N ++ GI FL ++ L R A PLL
Sbjct: 64 ILADIATQGQQVIATGGGIIMREENRECLKVSGIVFFLTASIEQLLERTAK--DKRRPLL 121
Query: 216 DYDSADSYTKAFTAL 230
++ + AL
Sbjct: 122 QVADPEARIRELIAL 136
>gi|291540965|emb|CBL14076.1| Shikimate kinase [Roseburia intestinalis XB6B4]
Length = 266
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 78 KWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKY-VEKLMGGT 136
K+++K R A L +FL+G MG+GK+T+ L D L+ + D+ VEK G
Sbjct: 74 KYIMKNSRRIQAKSLFDYNIFLIGFMGAGKSTIAGELKDKLEMDRVEMDQMIVEK--QGM 131
Query: 137 SVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNV 195
S+++IF E GEAYFR ES L +L Q +V+ GGG V+R N M++ G V L
Sbjct: 132 SISEIFDEYGEAYFRNLESNTLIELQKRKQTIVSCGGGVVMREENTDHMKKNGRVVLLTA 191
Query: 196 PLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAY-ANADATVS 249
+ + R+ +D P+L+ + + +S L +R + Y A AD TV+
Sbjct: 192 KPETIYERVK--DSDERPILNNNMNVEF------ISGLMDKRKDRYEAVADITVA 238
>gi|218462163|ref|ZP_03502254.1| shikimate kinase [Rhizobium etli Kim 5]
Length = 196
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Query: 81 LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQ 140
LK + R + L + L LVG+MG+GK+ VG I++ L F DSD +E++ ++A+
Sbjct: 12 LKDRAR---AALGSRNLILVGLMGAGKSAVGRIVASQLGIPFIDSDHEIERV-SRMTIAE 67
Query: 141 IFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDA 199
+F GE FR E++ +++L +VV+TGGGA V R + R G++V+L L+
Sbjct: 68 LFAAYGEDEFRALETRVMKRLLKSGPRVVSTGGGAFVNERTRRHIKRGGLSVWLKADLEV 127
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
L R+ D+ PLL ++ L L R YA AD TV
Sbjct: 128 LWERVNK--RDTRPLLKTENPKQ------TLENLMNARYPIYAQADLTV 168
>gi|401762483|ref|YP_006577490.1| shikimate kinase [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400174017|gb|AFP68866.1| shikimate kinase II [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 174
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 83/153 (54%), Gaps = 15/153 (9%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +FLVG G GKTTVG L+ A F D+D +++ G T +A I ++ G FR E
Sbjct: 3 QPIFLVGPRGCGKTTVGLELARACHRQFVDTDHWLQTEAGRT-IADIVEQEGWESFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+ AL+ ++ P V+ATGGG V+ N FMR+ GI ++L P+ AL R+ ++FP
Sbjct: 62 TAALKAVT-TPSAVIATGGGIVLAECNRHFMREKGIVIYLCAPVSALVGRL-----EAFP 115
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADA 246
+ A T+ LS+E SE A DA
Sbjct: 116 ------EEGQRPALTS-RPLSEEVSEVLAERDA 141
>gi|319786380|ref|YP_004145855.1| shikimate kinase [Pseudoxanthomonas suwonensis 11-1]
gi|317464892|gb|ADV26624.1| Shikimate kinase [Pseudoxanthomonas suwonensis 11-1]
Length = 180
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L LVG MG+GK+++G L++ F D+D Y+E+ G S++ IF GEA FRE ES
Sbjct: 7 LVLVGPMGAGKSSIGRRLAERFGLAFVDADAYIEQRTG-ASISAIFDHVGEAGFRERESV 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIA 205
AL +L Q+VATGGGAV+ N + MR+ G V+L+ +D+ +R++
Sbjct: 66 ALGELLASNGQLVATGGGAVLDAGNRQLMRERGFVVYLSAGIDSQLKRLS 115
>gi|189346472|ref|YP_001943001.1| shikimate kinase [Chlorobium limicola DSM 245]
gi|238692217|sp|B3EIT1.1|AROK_CHLL2 RecName: Full=Shikimate kinase; Short=SK
gi|189340619|gb|ACD90022.1| Shikimate kinase [Chlorobium limicola DSM 245]
Length = 199
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G GSGK+T+G +L+++L Y F D D+ +E G S+ +IF E GE FR E +
Sbjct: 7 IFLTGFSGSGKSTIGPLLANSLGYGFIDLDQEIES-KAGKSITKIFAEEGEQTFRNLELE 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L++L+ + VV+ GGG + +R +R+ G V+L +LARR+ TD PLL
Sbjct: 66 TLRQLTGKKELVVSLGGGVLENNDCYRLIRENGTLVYLKSSPRSLARRLCN-KTDR-PLL 123
Query: 216 DYDSADSYTKAFTAL--SALSKERSEAYANADATV 248
+ ++ L S + ++R YA AD +V
Sbjct: 124 KGEHGTRLSREEIELKISTILEKREPRYATADLSV 158
>gi|380693228|ref|ZP_09858087.1| shikimate kinase [Bacteroides faecis MAJ27]
Length = 175
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + L+ F D D Y+E+ T V ++F E GEA FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARKLNIPFIDLDWYIEERFHKT-VGELFTERGEAGFREIERN 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
L +++ V++TGGGA N FM R G TVFLNV D L RR+ + P+L
Sbjct: 63 MLHEVAEFENVVISTGGGAPCFFDNMEFMNRTGKTVFLNVHPDVLFRRL-RIAKQQRPIL 121
>gi|262380437|ref|ZP_06073591.1| shikimate kinase [Acinetobacter radioresistens SH164]
gi|421855216|ref|ZP_16287596.1| shikimate kinase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
gi|262297883|gb|EEY85798.1| shikimate kinase [Acinetobacter radioresistens SH164]
gi|403189227|dbj|GAB73797.1| shikimate kinase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
Length = 183
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G ++ IF++ GEA FR E+
Sbjct: 12 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHELER-KTGANIPWIFEKEGEAGFRSRETA 70
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
+ +L+L + V+ATGGGAV + N F++Q GI V+L P++ +R
Sbjct: 71 VIDQLTLRQKLVLATGGGAVTQVPNREFLKQRGIVVYLYTPVEIQLQR 118
>gi|255533540|ref|YP_003093912.1| shikimate kinase [Pedobacter heparinus DSM 2366]
gi|255346524|gb|ACU05850.1| Shikimate kinase [Pedobacter heparinus DSM 2366]
Length = 169
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 8/161 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G MG GK+T+G+ L+ L Y F D D+ +EK +G T + F E GEA FR+ ES
Sbjct: 4 IFLIGFMGCGKSTMGKKLAVKLGYDFVDLDQQIEKNIGKT-IGAYFSEHGEAAFRKLESD 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
L+ V+ATGGGA N +M G+T+++ +P ALA+R+ + G + PLL
Sbjct: 63 TLKHFDYPANVVIATGGGAPCFFDNMDWMNANGLTMYIEMPPAALAKRLES-GKEKRPLL 121
Query: 216 -DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAA 255
D + A L+ ER Y A + +NL A
Sbjct: 122 RDLNEAQMIEFIENRLA----ERDVFYKRAALVIDGINLNA 158
>gi|393786086|ref|ZP_10374225.1| shikimate kinase [Bacteroides nordii CL02T12C05]
gi|392660670|gb|EIY54278.1| shikimate kinase [Bacteroides nordii CL02T12C05]
Length = 175
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + L+ F D D Y+E+ T V ++F E GEA FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARTLNVPFVDLDWYMEERFHKT-VGELFAERGEAGFRELERN 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+++ V++TGGGA N FM G TVFLNV D L RR+ V P+L
Sbjct: 63 MLREVGAFENVVISTGGGAPCFFDNMDFMNHSGKTVFLNVHPDVLFRRL-RVAKQQRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
D K F + AL K R+ Y+ A
Sbjct: 122 Q-GKEDEELKEFI-IQALEK-RAPFYSQA 147
>gi|226311878|ref|YP_002771772.1| shikimate kinase [Brevibacillus brevis NBRC 100599]
gi|226094826|dbj|BAH43268.1| shikimate kinase [Brevibacillus brevis NBRC 100599]
Length = 173
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L LVG MG+GKTTVG L+ +L+ D D + + G S+ +IF + GEAYFR+ E+K
Sbjct: 4 LVLVGFMGTGKTTVGAALAASLEMKHTDLDDAIVEWEG-RSIPEIFTDQGEAYFRDVETK 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRI 204
L +L V QVV TGGGAV+R N M GI + L+ + L +R+
Sbjct: 63 RLAQLLAVGSQVVTTGGGAVLRKQNVEMMLEHGIVIALHATEEELIKRL 111
>gi|408376457|ref|ZP_11174062.1| shikimate kinase [Agrobacterium albertimagni AOL15]
gi|407749924|gb|EKF61435.1| shikimate kinase [Agrobacterium albertimagni AOL15]
Length = 196
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 16/168 (9%)
Query: 85 GREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKE 144
G + L + L LVG+MG+GK+ +G I++ L F D+D +E+ + ++A++F
Sbjct: 13 GVRAKTALGKRNLVLVGLMGAGKSAIGRIVAQQLGLPFVDTDTEIER-VSRMTIAELFAA 71
Query: 145 SGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ----GITVFLNVPLDAL 200
GE FR E++ +++L +VV+TGGGA + N R +Q G++V+LN LD L
Sbjct: 72 YGEEEFRALETRVIKRLLRTGPRVVSTGGGAFI---NERTRKQIERGGLSVWLNADLDVL 128
Query: 201 ARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
R+ D PLL ++ L L +R YA AD TV
Sbjct: 129 WERVNK--RDHRPLLKTENPKQ------TLKDLMDKRYPIYALADITV 168
>gi|424088184|ref|ZP_17824460.1| shikimate kinase 2 [Escherichia coli FRIK1996]
gi|390650952|gb|EIN29319.1| shikimate kinase 2 [Escherichia coli FRIK1996]
Length = 174
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFL+G G GKTTVG L+D+L+ F D+D++++ + T VA+I + A FR E
Sbjct: 3 QPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT-VAEIVEREEWAGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSF 212
+ AL+ ++ P V+ATGGG ++ N FM+ GI V+L P+ L R+ AV +
Sbjct: 62 TAALEAVT-APSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAVPEEDL 119
>gi|326390185|ref|ZP_08211746.1| Shikimate kinase [Thermoanaerobacter ethanolicus JW 200]
gi|392941076|ref|ZP_10306720.1| shikimate kinase [Thermoanaerobacter siderophilus SR4]
gi|325993833|gb|EGD52264.1| Shikimate kinase [Thermoanaerobacter ethanolicus JW 200]
gi|392292826|gb|EIW01270.1| shikimate kinase [Thermoanaerobacter siderophilus SR4]
Length = 171
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 90/180 (50%), Gaps = 22/180 (12%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L G M +GKTTVG+ ++ + + F D+DK +EK M +V+ IF++ GE YFR E
Sbjct: 4 IVLTGFMATGKTTVGKKVATTMSFGFIDTDKMIEK-MANMTVSDIFEKYGEDYFRRLEKA 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A+ K + + V+ATGGG V+ P N +R+ G+ + + + R I PLL
Sbjct: 63 AVIKAARLKNFVIATGGGVVLNPSNIVQLRKNGVVICFTARPEIILRNIGK--NKDRPLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVL 275
D+ + + L +ER Y AD T+ DV D+T +A EV+
Sbjct: 121 MVDNPEE------KIRQLLREREPFYRFADYTI------------DVSDMTIDEVAEEVI 162
>gi|300087347|ref|YP_003757869.1| shikimate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527080|gb|ADJ25548.1| Shikimate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 176
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 85/153 (55%), Gaps = 12/153 (7%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+G MGSGK++VG+ L+ L F ++D+ VE+ G T +A IF+ESGE FRE E+ +
Sbjct: 7 LIGFMGSGKSSVGKRLARRLGRDFLETDRLVEEAAGAT-IADIFRESGEGAFRELEAGVI 65
Query: 159 QKLSLVPQQ-VVATGGGAVVRPLNWRFMRQGIT-VFLNVPLDALARRIAAVGTDSFPLLD 216
+ + L + V+A GGG + RP N +++ T ++L ++ L R+A + PLL+
Sbjct: 66 KNIGLTARNAVIACGGGIITRPENLENLKRDTTIIYLKTGVEELQERLAH--SRRRPLLE 123
Query: 217 YDSADSYTKAFTALSALSKERSEAY-ANADATV 248
+ + + A +R Y A AD TV
Sbjct: 124 RPDREKFIRELIA------DREPLYRAAADITV 150
>gi|423385739|ref|ZP_17362995.1| shikimate kinase [Bacillus cereus BAG1X1-2]
gi|423527904|ref|ZP_17504349.1| shikimate kinase [Bacillus cereus HuB1-1]
gi|401635795|gb|EJS53550.1| shikimate kinase [Bacillus cereus BAG1X1-2]
gi|402451567|gb|EJV83386.1| shikimate kinase [Bacillus cereus HuB1-1]
Length = 165
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSQELQMDVVDTDQKIEEKQ-EKAIRDIFAEEGETAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L + +A R+ T P
Sbjct: 61 SEMLRSLP-VHNVIITTGGGIIERAENRKWMKENGTVVYLYCDPNVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ K F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVKKFESRRAYYE---EAHIHIDTT 148
>gi|218899395|ref|YP_002447806.1| shikimate kinase [Bacillus cereus G9842]
gi|402564351|ref|YP_006607075.1| shikimate kinase [Bacillus thuringiensis HD-771]
gi|226729118|sp|B7IXM2.1|AROK_BACC2 RecName: Full=Shikimate kinase; Short=SK
gi|218541979|gb|ACK94373.1| shikimate kinase [Bacillus cereus G9842]
gi|401793003|gb|AFQ19042.1| shikimate kinase [Bacillus thuringiensis HD-771]
Length = 165
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSQELQMDVVDTDQKIEEKQ-KKAIRDIFAEEGEMTFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L + +A R+ T P
Sbjct: 61 SEMLRSLP-VHNVIITTGGGIIERAENRKWMKENGTVVYLYCDPNVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ K F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVKKFESRRAYYE---EAHIHIDTT 148
>gi|167037493|ref|YP_001665071.1| shikimate kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320115907|ref|YP_004186066.1| Shikimate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|238687655|sp|B0K9C2.1|AROK_THEP3 RecName: Full=Shikimate kinase; Short=SK
gi|166856327|gb|ABY94735.1| Shikimate kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319928998|gb|ADV79683.1| Shikimate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 171
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 88/179 (49%), Gaps = 20/179 (11%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L G M +GKTTVG+ ++ + + F D+DK +EK M +V+ IF++ GE YFR E
Sbjct: 4 IVLTGFMATGKTTVGKKVATNMSFGFIDTDKMIEK-MANMTVSDIFEKYGEDYFRRLEKA 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLD 216
A+ K + + V+ATGGG V+ P N +R+ V V + R D PLL
Sbjct: 63 AVIKAARLKNFVIATGGGVVLNPSNIVQLRKNGVVICFVARPEIILRNIGKNKDR-PLLM 121
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVL 275
D+ + + L KER Y AD T+ DV D+T +A EV+
Sbjct: 122 VDNPEE------KIRQLLKEREPFYRFADYTI------------DVSDMTIDEVAEEVI 162
>gi|296101510|ref|YP_003611656.1| shikimate kinase [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295055969|gb|ADF60707.1| shikimate kinase II [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 174
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 84/153 (54%), Gaps = 15/153 (9%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +FLVG G GKTTVG L+ A F D+D +++ G ++A I ++ G FR E
Sbjct: 3 QPIFLVGPRGCGKTTVGLELARACQRHFVDTDHWLQT-QAGQTIADIVEKEGWESFRSRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+ AL+ ++ P V+ATGGG ++ N R+MR+ GI ++L P+ AL R+ ++FP
Sbjct: 62 TAALEAVT-APDAVIATGGGIILAEYNRRYMREKGIVIYLCAPVAALVGRL-----EAFP 115
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADA 246
+ A T+ LS+E SE A DA
Sbjct: 116 ------EEGQRPALTS-RPLSEEVSEVLAERDA 141
>gi|431794372|ref|YP_007221277.1| shikimate kinase [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784598|gb|AGA69881.1| shikimate kinase [Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 195
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 81/154 (52%), Gaps = 12/154 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVG MG+GK+TVG L+ L F D+D +E+L T V++IF+ GE FR E
Sbjct: 25 VILVGFMGTGKSTVGRRLAKLLGRDFIDTDVEIERLTEMT-VSEIFRRHGETRFRSEERL 83
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+++L+ V+ATGGG V+ P NW+ + Q G+ + L PLD + +RI + PLL
Sbjct: 84 LVKRLADQKGYVIATGGGTVLNPDNWQDLAQSGVIIGLYAPLDEIYKRIGY--RNDRPLL 141
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVS 249
D + L +R Y A+ TV
Sbjct: 142 RGDRQ--------VVEELWAKRQPIYNQANWTVD 167
>gi|302383499|ref|YP_003819322.1| shikimate kinase [Brevundimonas subvibrioides ATCC 15264]
gi|302194127|gb|ADL01699.1| Shikimate kinase [Brevundimonas subvibrioides ATCC 15264]
Length = 188
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 86/157 (54%), Gaps = 10/157 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVG+MG GK+TVG L++ L F D D +E +V++IF + GEA FR E
Sbjct: 15 RIIALVGLMGVGKSTVGRRLANRLGLPFVDGDDAIEA-AAQMTVSEIFAQMGEAEFRAGE 73
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
++ +++L P V+ATGGGAV+ P M+ + +V+L + +A R+ D+ P
Sbjct: 74 ARVMRRLLEGPPIVLATGGGAVLNPDTRALMKAKATSVWLRADIRVVASRVQR--RDTRP 131
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
LL AL+A+++ R YA AD TV +
Sbjct: 132 LL------RGKDPLAALTAMAEVRYPVYATADVTVDV 162
>gi|400754280|ref|YP_006562648.1| shikimate kinase AroK [Phaeobacter gallaeciensis 2.10]
gi|398653433|gb|AFO87403.1| shikimate kinase AroK [Phaeobacter gallaeciensis 2.10]
Length = 196
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 11/167 (6%)
Query: 83 AKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIF 142
A R V L + + +VGMMG+GKT VG L+ L F DSD +E T + +IF
Sbjct: 11 AGDRRVPGALK-KTIVMVGMMGAGKTAVGRALAARLQAPFLDSDHEIEAAANRT-IPEIF 68
Query: 143 KESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALA 201
GE +FR+ E + +++L + V++TGGGA + N + + +G+ ++LN L+ L
Sbjct: 69 ARDGELFFRKKERQVIRRLLDEERGVLSTGGGAFLAEENRQIISERGVAIWLNADLEVLW 128
Query: 202 RRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
R+ D+ PLL + + LSAL +R YA AD TV
Sbjct: 129 NRVKH--RDTRPLLRTEDPHA------TLSALYHDRVPYYAQADLTV 167
>gi|293392604|ref|ZP_06636924.1| shikimate kinase [Serratia odorifera DSM 4582]
gi|291425006|gb|EFE98215.1| shikimate kinase [Serratia odorifera DSM 4582]
Length = 174
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 73/118 (61%), Gaps = 3/118 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G+GKTTVG L+ AL + F D+D ++++ SVA++ ++ G FR E
Sbjct: 3 QTIFMVGARGAGKTTVGRALAQALGFGFIDTDLFMQQ-AAQMSVAEMVEQEGWLGFRRRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS 211
+ ALQ ++ P +VATGGGA++ N RFM+Q G ++L P LA+R+ D+
Sbjct: 62 TIALQDVTQ-PSTIVATGGGAILAEENRRFMQQHGTVIYLRSPARVLAQRLEGSPDDT 118
>gi|373121315|ref|ZP_09535183.1| shikimate 5-dehydrogenase [Erysipelotrichaceae bacterium 21_3]
gi|371665333|gb|EHO30498.1| shikimate 5-dehydrogenase [Erysipelotrichaceae bacterium 21_3]
Length = 421
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 18/158 (11%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFAD-SDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+ L+GM +GKTT+G++L + + F D D +EK G S+ +IF+ESGEA FR E+
Sbjct: 256 IVLIGMPSAGKTTIGKMLENRMQKEFIDLDDIIIEK--AGKSIPEIFEESGEAGFRAIET 313
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPL 214
+A ++S + +++ATGGG + +N ++RQ GIT+F++ +D L
Sbjct: 314 EAAIEVSKLNNKIIATGGGTIKHKVNMDYLRQNGITIFIDRDVDK--------------L 359
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
+ D +K+ AL+ + ER Y A V++ N
Sbjct: 360 ISSDPNRPLSKSSDALAKMHAERLPLYQKYAAYVAVNN 397
>gi|255692944|ref|ZP_05416619.1| shikimate kinase [Bacteroides finegoldii DSM 17565]
gi|423301169|ref|ZP_17279193.1| shikimate kinase [Bacteroides finegoldii CL09T03C10]
gi|260621255|gb|EEX44126.1| shikimate kinase [Bacteroides finegoldii DSM 17565]
gi|408472504|gb|EKJ91032.1| shikimate kinase [Bacteroides finegoldii CL09T03C10]
Length = 175
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + ++ F D D Y+E+ T V ++F E GEA FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARKMNIPFIDLDWYIEERFHKT-VGELFTERGEAGFRELERN 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
L +++ V++TGGGA N FM R G TVFL+V D L RR+ V P+L
Sbjct: 63 MLHEVAEFENVVISTGGGAPCFFDNMEFMNRAGKTVFLDVHPDVLFRRL-RVAKQQRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
D K F + AL K R+ Y A
Sbjct: 122 Q-GKEDDELKTFI-IQALEK-RAPFYHQA 147
>gi|451823409|ref|YP_007459683.1| shikimate kinase [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
gi|451776209|gb|AGF47250.1| shikimate kinase [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
Length = 206
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 6/130 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+GMMG+GK+TVG L+ + F D D +E + G ++ IF+ GE FR+ E+
Sbjct: 41 IFLIGMMGAGKSTVGRCLAQYIGKKFVDLDSEIE-IACGVNIPVIFEIEGEDGFRKRETD 99
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
LQK+SL V+ATGGGAV+ N + GI V+L +D L +R++ + PLL
Sbjct: 100 ILQKISLEKNIVLATGGGAVLAEDNRHLLTSGGIVVYLQANIDVLFKRVSV--DQNRPLL 157
Query: 216 DYDSADSYTK 225
D Y K
Sbjct: 158 AI--KDPYVK 165
>gi|357029137|ref|ZP_09091144.1| hypothetical protein MEA186_30097, partial [Mesorhizobium amorphae
CCNWGS0123]
gi|355536211|gb|EHH05488.1| hypothetical protein MEA186_30097, partial [Mesorhizobium amorphae
CCNWGS0123]
Length = 293
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 91/164 (55%), Gaps = 10/164 (6%)
Query: 86 REVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKES 145
+E+ + L+G+ + LVGM +GK+++G L+ L F D+DK ++K S++QIF+
Sbjct: 45 KEIFAALNGRPVVLVGMPSAGKSSIGPALARRLRLPFVDTDKIIQKDTR-ISISQIFEVH 103
Query: 146 GEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRI 204
GEA+FR+ E++ + L V+ATGGGA +R + + + ++++L+ LD + +R
Sbjct: 104 GEAFFRDMEARVIADLLQKGPAVIATGGGAFMREQSRHLIGEKAVSIWLDTRLDVIEKRT 163
Query: 205 AAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
S PLL + + ++ L ER YA AD TV
Sbjct: 164 R--NDTSRPLLQGPNPEQK------IARLLSERRPFYAQADITV 199
>gi|346314394|ref|ZP_08855915.1| hypothetical protein HMPREF9022_01572 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345906752|gb|EGX76476.1| hypothetical protein HMPREF9022_01572 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 421
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 18/158 (11%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFAD-SDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+ L+GM +GKTT+G++L + + F D D +EK G S+ +IF+ESGEA FR E+
Sbjct: 256 IVLIGMPSAGKTTIGKMLENRMQKEFIDLDDIIIEK--AGKSIPEIFEESGEAGFRAIET 313
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPL 214
+A ++S + +++ATGGG + +N ++RQ GIT+F++ +D L
Sbjct: 314 EAAIEVSKLNNKIIATGGGTIKHKVNMDYLRQNGITIFIDRDVDK--------------L 359
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
+ D +K+ AL + ER Y A V++ N
Sbjct: 360 ISSDPNRPLSKSTDALEKMHAERLPLYQKYAAYVAVNN 397
>gi|422022018|ref|ZP_16368527.1| shikimate kinase [Providencia sneebia DSM 19967]
gi|414097768|gb|EKT59421.1| shikimate kinase [Providencia sneebia DSM 19967]
Length = 165
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+++G G+GKTT+G+ L++ +Y F D+DK + + G T +AQI ++ G YFR+ ES
Sbjct: 1 MFYIIGPRGAGKTTIGKKLAEHKEYNFVDTDKLIVERAGKT-IAQIVEQHGWEYFRQLES 59
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
L+ L L P +++TGGG ++ N R MR G ++L+ LA+R+AA
Sbjct: 60 DVLESL-LQPNLIISTGGGIILSEENQRVMRNNGTVIYLSTSPQVLAQRLAA 110
>gi|357059241|ref|ZP_09120085.1| shikimate kinase [Selenomonas infelix ATCC 43532]
gi|355372570|gb|EHG19910.1| shikimate kinase [Selenomonas infelix ATCC 43532]
Length = 173
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 84/153 (54%), Gaps = 7/153 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKT+VG +L+ L F D D+ +E+ G + IFKE GE YFR E +
Sbjct: 4 VVLIGFMGTGKTSVGRLLATRLGCAFHDLDRKIEEHCG-MPIPVIFKEHGEPYFRAREKE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A++ + V+ATGGG V N +R+ G+ V L D + +R G + P+L
Sbjct: 63 AVRAAAARTNIVIATGGGTVKDAENVALLRKNGVLVALTADADTILQRTRVRG--ARPVL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
DSAD+ + A+ L +ER Y +AD TV
Sbjct: 121 --DSADAGDRR-AAVERLLEERRHLYESADITV 150
>gi|298480531|ref|ZP_06998728.1| shikimate kinase [Bacteroides sp. D22]
gi|295086217|emb|CBK67740.1| shikimate kinase [Bacteroides xylanisolvens XB1A]
gi|298273352|gb|EFI14916.1| shikimate kinase [Bacteroides sp. D22]
Length = 175
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + ++ F D D Y+E+ T V ++F E GE FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARQMNIPFVDLDWYIEERFHKT-VGELFTERGETGFRELERN 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
L +++ V++TGGGA N FM R G TVFL+V D L RR+ V P+L
Sbjct: 63 MLHEVAEFENVVISTGGGAPCFFDNMEFMNRTGKTVFLDVHPDVLFRRL-RVAKQQRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
D KAF + AL K R+ Y A
Sbjct: 122 Q-GKEDDELKAFI-VQALEK-RAPFYHQA 147
>gi|422327329|ref|ZP_16408356.1| shikimate 5-dehydrogenase [Erysipelotrichaceae bacterium 6_1_45]
gi|371663634|gb|EHO28821.1| shikimate 5-dehydrogenase [Erysipelotrichaceae bacterium 6_1_45]
Length = 421
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 18/158 (11%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFAD-SDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+ L+GM +GKTT+G++L + + F D D +EK G S+ +IF+ESGEA FR E+
Sbjct: 256 IVLIGMPSAGKTTIGKMLENRMQKEFIDLDDIIIEK--AGKSIPEIFEESGEAGFRAIET 313
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPL 214
+A ++S + +++ATGGG + +N ++RQ GIT+F++ +D L
Sbjct: 314 EAAIEVSKLNNKIIATGGGTIKHKVNMDYLRQNGITIFIDRDVDK--------------L 359
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
+ D +K+ AL + ER Y A V++ N
Sbjct: 360 ISSDPNRPLSKSTDALEKMHAERLPLYQKYAAYVAVNN 397
>gi|373452094|ref|ZP_09544012.1| shikimate 5-dehydrogenase [Eubacterium sp. 3_1_31]
gi|371967526|gb|EHO84997.1| shikimate 5-dehydrogenase [Eubacterium sp. 3_1_31]
Length = 421
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFAD-SDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+ L+GM SGKTT+G++L+ + F D DK +EK G S+ +IF ESGEA FR E+
Sbjct: 256 IVLIGMPSSGKTTIGKMLAKRMQKEFIDLDDKIIEK--AGKSIPEIFTESGEAGFRAIET 313
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDAL 200
+ +L+ +++ATGGG V +N ++RQ GIT+F++ +D L
Sbjct: 314 EVAIELAKTNNKIIATGGGTVKHKVNMDYLRQNGITIFIDRDVDKL 359
>gi|317047111|ref|YP_004114759.1| shikimate kinase [Pantoea sp. At-9b]
gi|316948728|gb|ADU68203.1| Shikimate kinase [Pantoea sp. At-9b]
Length = 174
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++L+G G GKTT+G+ LS AL Y F D+D +++ T VA+I G FR E++
Sbjct: 5 IYLIGARGCGKTTIGQALSQALGYAFRDTDHHLQTTTQRT-VAEIVAAEGWDSFRARETE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
+LQ ++ P ++ATGGG V+ +N RFMR+ G ++LN P LA R+
Sbjct: 64 SLQAVT-APGTIIATGGGMVLAEVNRRFMREHGQVIWLNAPSTVLADRL 111
>gi|167587729|ref|ZP_02380117.1| shikimate kinase [Burkholderia ubonensis Bu]
Length = 184
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 74/133 (55%), Gaps = 6/133 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F VG+MG+GKTTVG ++ LD TF DSD +E G + IF+ GEA FRE E++
Sbjct: 10 VFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEIEART-GARIPVIFEMEGEAGFREREAQ 68
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNV-PLDALARRIAAVGTDSFPL 214
+ +L+ V+ATGGGA++RP N ++ GI V+L P D R + PL
Sbjct: 69 MIAELAQREHIVLATGGGAILRPENRECLKSHGIVVYLRANPHDLWLR---TRKDKNRPL 125
Query: 215 LDYDSADSYTKAF 227
L D + +A
Sbjct: 126 LQTDDPKARLEAL 138
>gi|84516060|ref|ZP_01003420.1| putative shikimate kinase [Loktanella vestfoldensis SKA53]
gi|84509756|gb|EAQ06213.1| putative shikimate kinase [Loktanella vestfoldensis SKA53]
Length = 185
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVGMMGSGKT +G L+ L F DSD +E+ S+A+IF GEA+FR E
Sbjct: 11 RSVVLVGMMGSGKTAIGRSLASTLHVPFVDSDTAIEE-AAALSIAEIFARDGEAFFRRRE 69
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFP 213
++ L++L Q+++TGGGA + N + R I V+L+ L+ L R+ D+ P
Sbjct: 70 TEVLRRLLAGGAQIISTGGGAFLAAENRDMIARDAIAVWLDADLNTLWERVR--HKDTRP 127
Query: 214 LL 215
LL
Sbjct: 128 LL 129
>gi|254490371|ref|ZP_05103560.1| shikimate kinase [Methylophaga thiooxidans DMS010]
gi|224464504|gb|EEF80764.1| shikimate kinase [Methylophaga thiooxydans DMS010]
Length = 167
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 103 MGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLS 162
MG+GK+T+G L+ AL F DSD+ +EK G S++ IF+ GEA FRE ESKA+ +L+
Sbjct: 1 MGAGKSTIGRQLAKALRKKFYDSDREIEKRTG-VSISWIFEMEGEAGFRERESKAIDELT 59
Query: 163 LVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIA 205
VVATGGGA++ N ++R +G V+L+ + L RR A
Sbjct: 60 AFDNVVVATGGGAILSEENRNWLRSRGEVVYLSATAEQLYRRTA 103
>gi|313901106|ref|ZP_07834594.1| shikimate kinase [Clostridium sp. HGF2]
gi|312954064|gb|EFR35744.1| shikimate kinase [Clostridium sp. HGF2]
Length = 421
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 18/158 (11%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFAD-SDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+ L+GM +GKTT+G++L + + F D D +EK G S+ +IF+ESGEA FR E+
Sbjct: 256 IVLIGMPSAGKTTIGKMLENRMQKEFIDLDDIIIEK--AGKSIPEIFEESGEAGFRAIET 313
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPL 214
+A ++S + +++ATGGG + +N ++RQ GIT+F++ +D L
Sbjct: 314 EAAIEVSKLNNKIIATGGGTIKHKVNMDYLRQNGITIFIDRDVDK--------------L 359
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
+ D +K+ AL + ER Y A V++ N
Sbjct: 360 ISSDPNRPLSKSTDALEKMHAERLPLYQKYAAYVAVNN 397
>gi|338972213|ref|ZP_08627589.1| shikimate kinase I [Bradyrhizobiaceae bacterium SG-6C]
gi|338234605|gb|EGP09719.1| shikimate kinase I [Bradyrhizobiaceae bacterium SG-6C]
Length = 204
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 9/164 (5%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
++ + L G+ + LVGMMGSGK+T+G L L F D+D +E G +V++IF + G
Sbjct: 17 DIVAALHGRPVVLVGMMGSGKSTIGRRLGARLHLPFLDADHEIEVAHAGMTVSEIFAQHG 76
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVR-PLNWRFMRQGITVFLNVPLDALARRIA 205
E YFR+ E++ + +L V+ATGGGA +R R + ++++L D + +R+
Sbjct: 77 EPYFRDGEARVIARLLEGGSCVIATGGGAFMREETRNRIHDKAVSIWLKADGDVILKRVK 136
Query: 206 AVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
PLL + + A ERS Y AD V+
Sbjct: 137 RRA--DRPLLQTPDPAATIERLIA------ERSPFYQFADLAVA 172
>gi|262370668|ref|ZP_06063993.1| shikimate kinase [Acinetobacter johnsonii SH046]
gi|381198009|ref|ZP_09905348.1| shikimate kinase [Acinetobacter lwoffii WJ10621]
gi|262314468|gb|EEY95510.1| shikimate kinase [Acinetobacter johnsonii SH046]
Length = 177
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G T + IF++ GE FR E+
Sbjct: 12 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKTGAT-IPWIFEKEGELGFRSRETV 70
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
+ +L+ P V+ATGGGAV + N F++Q GI V+L P++ +R
Sbjct: 71 VIDELTSRPNLVLATGGGAVTQAPNRAFLKQRGIVVYLYTPVEIQLQR 118
>gi|375084651|ref|ZP_09731511.1| hypothetical protein HMPREF9454_00122 [Megamonas funiformis YIT
11815]
gi|374567898|gb|EHR39096.1| hypothetical protein HMPREF9454_00122 [Megamonas funiformis YIT
11815]
Length = 172
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 8/153 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MGSGK+ G++L+ L Y+F D+D +E+ T + +F + GEA FR+ E+
Sbjct: 5 IVLIGFMGSGKSITGKLLAYRLGYSFVDTDTAIEQEYK-TKIKDMFAKEGEAIFRQRETA 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+QKL+ QV++TGGG + + + +R+ GI + L + +R G D PLL
Sbjct: 64 TIQKLAQKSHQVISTGGGVATKETDMQELRKNGIVIALTAMPHTILKR---TGNDKRPLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
S + K L A +R+ Y AD +
Sbjct: 121 AKKSNEERLKTIIELMA---KRAPFYKKADLII 150
>gi|345017578|ref|YP_004819931.1| shikimate kinase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032921|gb|AEM78647.1| Shikimate kinase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 171
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 22/180 (12%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L G M +GKTTVG+ ++ + + F D+DK +EK M +V++IF++ GE +FR E
Sbjct: 4 IVLTGFMATGKTTVGKKVATTMSFGFIDTDKMIEK-MANMTVSEIFEKYGEDFFRRLEKA 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A+ K + + V+ATGGG V+ P N +R+ G+ + + + R I PLL
Sbjct: 63 AVIKAARLKNFVIATGGGVVLNPSNIVQLRKNGVVICFTARPEIILRNIGK--NKDRPLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVL 275
D+ + + L +ER Y AD T+ DV D+T +A EV+
Sbjct: 121 MVDNPEE------KIRQLLREREPFYRFADYTI------------DVSDMTIDEVAEEVI 162
>gi|421486526|ref|ZP_15934070.1| shikimate kinase [Achromobacter piechaudii HLE]
gi|400195230|gb|EJO28222.1| shikimate kinase [Achromobacter piechaudii HLE]
Length = 185
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVGMMG+GKTT+G L+ AL F D D +E G V IF+ GE FR ES
Sbjct: 16 VFLVGMMGAGKTTIGRSLARALGREFMDLDHELEARC-GVRVPVIFEIEGETGFRRRESA 74
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
AL++ + ++ATGGGA++ P N R + + GI V+L +D L RR
Sbjct: 75 ALEECTQRRNIILATGGGAILAPENRRRLHERGIVVYLRASVDELFRR 122
>gi|330813130|ref|YP_004357369.1| 3-dehydroquinate synthase [Candidatus Pelagibacter sp. IMCC9063]
gi|327486225|gb|AEA80630.1| 3-dehydroquinate synthase [Candidatus Pelagibacter sp. IMCC9063]
Length = 538
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 87/155 (56%), Gaps = 9/155 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
L L GMMGSGK+++G+ LS+ L F D+D +EK++ T + IFK GE YFR+ E
Sbjct: 3 NTLVLTGMMGSGKSSIGKELSNILSLKFYDTDLEIEKMLNMT-IPDIFKNKGENYFRKIE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVV-RPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
K L ++V+A GGGA + + + +++ I+V+++V + + +R+ + + P
Sbjct: 62 EKICIDLINGDEKVIALGGGAFLNKKIREIVLKKSISVWIDVDISTIVKRM-KISKNIRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
+LDY +++++ +RS Y A+ +
Sbjct: 121 MLDYKDLKG------SITSILAKRSPIYQLANIKI 149
>gi|374328418|ref|YP_005078602.1| shikimate kinase [Pseudovibrio sp. FO-BEG1]
gi|359341206|gb|AEV34580.1| Shikimate kinase [Pseudovibrio sp. FO-BEG1]
Length = 207
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 22/192 (11%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L + + LVG+MG GK+TVG L+ L F D+D +EK S+++IF E GE+YFR
Sbjct: 22 LGNKPIVLVGIMGCGKSTVGRRLAQYLSLNFVDADTEIEK-AADRSISEIFAEHGESYFR 80
Query: 152 EYESKALQKLSLVPQQVVATGGGAVV-RPLNWRFMRQGITVFLNVPLDALARRIAAVGTD 210
+ E + + +L QV+ATGGGA + R +GI++++ L + R+ T
Sbjct: 81 QGEKRVIARLLDEGPQVLATGGGAFINEETRSRIKEKGISIWMKAELPVIMTRVRKRPTR 140
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTI 270
PLL +AD + L ER Y AD T+ D+T +
Sbjct: 141 --PLL--QTADPE----ATMQKLMDERYPIYEEADMTIW------------SRDVTHEAV 180
Query: 271 AMEVLVQAQKYL 282
E+L+ +K L
Sbjct: 181 MEEILIALEKGL 192
>gi|262277620|ref|ZP_06055413.1| shikimate kinase [alpha proteobacterium HIMB114]
gi|262224723|gb|EEY75182.1| shikimate kinase [alpha proteobacterium HIMB114]
Length = 167
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 86/155 (55%), Gaps = 9/155 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVGMMGSGKT++G+ L+ +L+ F DSDK +E L ++ +IF+ GE YFR+ E
Sbjct: 3 KTIVLVGMMGSGKTSIGKELAKSLNINFIDSDKEIE-LKCKKTIPKIFETKGETYFRKIE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRP-LNWRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
K KL +V++ GGGA + + + + G++++++ L+ + R+ + P
Sbjct: 62 EKICVKLIDGNPKVLSLGGGAFLNSAIRKKINKLGLSIWISPSLETIYERLGK-SKNKRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL+Y + ++ + R E Y A+ T+
Sbjct: 121 LLNYKNLKR------SIKVIYDSRKEQYNKANYTI 149
>gi|423634937|ref|ZP_17610590.1| shikimate kinase [Bacillus cereus VD156]
gi|401278923|gb|EJR84853.1| shikimate kinase [Bacillus cereus VD156]
Length = 165
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ VE+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELQIDVVDTDQKVEEKQ-EKAIRNIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLRSLP-VHNVIITTGGGIIERAENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ K F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVKKFESRRAYYE---EAHIHIDTT 148
>gi|299132833|ref|ZP_07026028.1| Shikimate kinase [Afipia sp. 1NLS2]
gi|298592970|gb|EFI53170.1| Shikimate kinase [Afipia sp. 1NLS2]
Length = 204
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
++ S L + + VGMMGSGK+TVG L+ L F D+D +E GG ++ +IF G
Sbjct: 17 DILSALGPRAIVFVGMMGSGKSTVGRRLAARLRLPFVDADHEIETRHGGMTITEIFANHG 76
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRP-LNWRFMRQGITVFLNVPLDALARRI 204
E YFRE E+K + L QV+ATGGGA +R R + ++++L + RR+
Sbjct: 77 EPYFREGEAKVISALLDGGAQVLATGGGAFLREDTRARIRDKAVSIWLKADGPTVLRRV 135
>gi|332185313|ref|ZP_08387062.1| shikimate kinase family protein [Sphingomonas sp. S17]
gi|332015037|gb|EGI57093.1| shikimate kinase family protein [Sphingomonas sp. S17]
Length = 180
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 84/166 (50%), Gaps = 16/166 (9%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
V S G + LVG+MG GK+TVG L++ L F D+D +E+ G SV +IF++ GE
Sbjct: 8 VDSSWTGSPIVLVGLMGVGKSTVGRRLANRLRVPFVDADHAIEE-AAGMSVTEIFEQFGE 66
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVV----RPLNWRFMRQGITVFLNVPLDALARR 203
YFR+ E + + +L +V+ATGGGA + R L + Q ++LN + LA R
Sbjct: 67 PYFRDGERRVIARLVDGRPKVIATGGGAFINDETRAL---ILEQATAIWLNASPEVLAER 123
Query: 204 IAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
+ D+ PLL L LS R+ YA A VS
Sbjct: 124 VRR--RDTRPLL------RGKDPLKVLRELSAVRNPIYALAPIHVS 161
>gi|170740411|ref|YP_001769066.1| shikimate kinase [Methylobacterium sp. 4-46]
gi|168194685|gb|ACA16632.1| Shikimate kinase [Methylobacterium sp. 4-46]
Length = 201
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 10/178 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
V L + + LVG+MG+GK+TVG L+ L F D+D +E G ++A IF GE
Sbjct: 15 VRRGLGQRSIVLVGLMGAGKSTVGRRLAGRLGMIFMDADHEIEA-AAGLTIADIFAIYGE 73
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRP-LNWRFMRQGITVFLNVPLDALARRIAA 206
FR+ E + + +L V+ATGGGA +RP R G++V+L LD L RR+
Sbjct: 74 TSFRDGEERVIARLLRDGPMVLATGGGAFMRPETRRRIAEAGVSVWLKAELDVLMRRVRK 133
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLD 264
PLL + + + L R Y +AD V +++ ++DVL+
Sbjct: 134 --RPGRPLLQNEDPEGTMRRLMDL------RHPVYGSADVVVLSRDVSHDRVVQDVLE 183
>gi|124007876|ref|ZP_01692577.1| shikimate kinase [Microscilla marina ATCC 23134]
gi|123986638|gb|EAY26428.1| shikimate kinase [Microscilla marina ATCC 23134]
Length = 161
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 8/161 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+GM GSGK++VG+ L+ F D D+ +E+ S+ IF++ GEA+FR E
Sbjct: 3 IFLIGMPGSGKSSVGKQLASEWQIPFVDMDELIEQ-KAQKSIPTIFEQDGEAHFRRLEQA 61
Query: 157 ALQKLSLVPQ--QVVATGGGAVVRPLNW-RFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
L ++ P QV+ATGGGA N R R G +VF++ PL +A+R+ D P
Sbjct: 62 VLHEIIAQPPTTQVIATGGGAPCFFDNMDRINRAGTSVFIDTPLYTIAQRMTNKSQDR-P 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLA 254
L Y AD Y + L +R + Y A+ +S L+
Sbjct: 121 L--YQQAD-YDAMYQKLVHTFGQRKQFYWQANIFLSATELS 158
>gi|374623719|ref|ZP_09696222.1| Shikimate kinase [Ectothiorhodospira sp. PHS-1]
gi|373942823|gb|EHQ53368.1| Shikimate kinase [Ectothiorhodospira sp. PHS-1]
Length = 190
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 5/151 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GK+TVG L+ L F DSDK +E+ G S+ IF+ GEA FR+ E+
Sbjct: 7 IILIGPMGAGKSTVGRHLATYLHLPFVDSDKEIERRTG-VSIPTIFEYEGEAGFRDREAA 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
+ +L V+ATGGG V+RP N R R G+ V+L ++ RR + + PLL
Sbjct: 66 MIDELCSRQGIVLATGGGVVMRPENRMRLARCGLVVYLRASVNTQLRRTSR--DRNRPLL 123
Query: 216 DYDSADSYTKA-FTALSALSKERSEAYANAD 245
D+ + +A F L +E ++ + D
Sbjct: 124 QTDNPRARLEALFRTRDPLYREIADLIVDTD 154
>gi|237747397|ref|ZP_04577877.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacter formigenes HOxBLS]
gi|229378748|gb|EEO28839.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacter formigenes HOxBLS]
Length = 559
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +FLVG+MGSGKTTVG +L+ L F DSD +E G T ++ IF+ GE FR E
Sbjct: 3 ENIFLVGLMGSGKTTVGRLLAKRLGLRFVDSDHEIEARTGAT-ISWIFEIEGEESFRRRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
+ ++ L+ V+ATGGGAVV P N + ++ +G ++L ++ + +R + S P
Sbjct: 62 VETIKDLTGQTGVVLATGGGAVVHPDNRKHLKSRGTVIYLRASVNNILQR--TMHDKSRP 119
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAY 241
LL ++ L L+K+R Y
Sbjct: 120 LLQTENRRK------KLEELAKQREPFY 141
>gi|293400584|ref|ZP_06644729.1| fusion: chorismate mutase and shikimate 5-dehydrogenase
[Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305610|gb|EFE46854.1| fusion: chorismate mutase and shikimate 5-dehydrogenase
[Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 421
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 19/164 (11%)
Query: 92 LDGQC-LFLVGMMGSGKTTVGEILSDALDYTFAD-SDKYVEKLMGGTSVAQIFKESGEAY 149
L +C + L+GM +GKTT+G++L + + F D DK +EK G S+ +IF ESGEA
Sbjct: 250 LKERCNIVLIGMPSAGKTTIGKMLEERMQKDFIDLDDKIIEK--AGKSIPEIFSESGEAG 307
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVG 208
FR E++ +L+ +++ATGGG + +N ++RQ GIT+F++ +D
Sbjct: 308 FRAIETEVAIELAKTNNKIIATGGGTIKHKVNMDYLRQNGITIFIDRDVDK--------- 358
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
L+ D + + AL + +ER Y A V++ N
Sbjct: 359 -----LISADPNRPLSSSKEALHKMHEERLPLYQKYAAYVAMNN 397
>gi|189424650|ref|YP_001951827.1| shikimate kinase [Geobacter lovleyi SZ]
gi|189420909|gb|ACD95307.1| Shikimate kinase [Geobacter lovleyi SZ]
Length = 175
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 83/157 (52%), Gaps = 13/157 (8%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L G MGSGKT+VG++L+ L Y F D D + + G S+ QIF + GEA FRE E
Sbjct: 3 ESIILTGPMGSGKTSVGQLLAARLGYRFQDLDALLVE-QAGKSINQIFADEGEAAFRERE 61
Query: 155 SKALQKLSLVPQQ--VVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS 211
+ L +LV Q +++TGGG V+R N R + G+ V L + LA R+A D
Sbjct: 62 TALLA--TLVGQHGIILSTGGGVVIREANRRLLHAGGLVVNLTATVPVLAGRLAL--ADD 117
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
PLL D A + + ER YA+AD +
Sbjct: 118 RPLLKGDEALE-----ARIERIMTEREPFYADADIRI 149
>gi|395791705|ref|ZP_10471161.1| shikimate kinase [Bartonella alsatica IBS 382]
gi|395408008|gb|EJF74628.1| shikimate kinase [Bartonella alsatica IBS 382]
Length = 210
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 10/164 (6%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
++ S LD + L VG+MG+GK+ +G+ ++ L F DSD+ +EK++ + +IFK G
Sbjct: 17 QLLSSLDKRALVFVGLMGAGKSVIGKRVATMLHLPFYDSDQEIEKVV-QMKITEIFKIYG 75
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIA 205
E FR E + + L V+ATGGGA + + + Q GI+++L LD L RR++
Sbjct: 76 EPKFRALEQRVILNLIKKSPLVLATGGGAYINQAIQKAIHQNGISIWLKADLDTLMRRVS 135
Query: 206 AVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
T PLL + + L +ER Y A+ T++
Sbjct: 136 RHPTR--PLLQTANPKE------TMRKLMEERYPIYGKANLTIN 171
>gi|325265677|ref|ZP_08132366.1| shikimate kinase [Kingella denitrificans ATCC 33394]
gi|324982808|gb|EGC18431.1| shikimate kinase [Kingella denitrificans ATCC 33394]
Length = 177
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 10/161 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
LFL+G+MG+GKTT+G L+ L Y F DSD + + G ++ IF+ GE FR+ ES
Sbjct: 12 LFLIGLMGAGKTTLGRQLAGHLQYPFYDSDNVICQRTG-VNIPTIFEIEGEQGFRQRESM 70
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
+Q+L+ + V+ATGGGAV+R N +R +G ++L+V + L R + PLL
Sbjct: 71 VIQELTAMDNVVLATGGGAVLREENRHCLRNRGTVIYLHVLPEILFERTKY--DKNRPLL 128
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAAC 256
AD +K L + R E Y V + + C
Sbjct: 129 QV--ADPLSK----FRELYETRHELYCQTAHMVLEVGKSGC 163
>gi|149913842|ref|ZP_01902374.1| shikimate kinase [Roseobacter sp. AzwK-3b]
gi|149812126|gb|EDM71957.1| shikimate kinase [Roseobacter sp. AzwK-3b]
Length = 206
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 10/156 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVGMMG+GKT VG+ L+ L F DSD +E+ S+A+IF GEA+FR+ E
Sbjct: 31 KTVVLVGMMGAGKTAVGKALAVRLAVPFLDSDAEIEQ-AANMSIAEIFARDGEAFFRDRE 89
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFP 213
++ + +L + +++TGGGA + N + R+G++V+L L L R+ D+ P
Sbjct: 90 TQVIDRLLEGERGILSTGGGAFLSERNRNLISRKGVSVWLKADLALLWSRVKH--KDTRP 147
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL +AD Y L L + R Y AD TV+
Sbjct: 148 LL--RTADPY----GTLRDLYETRLPFYQEADLTVT 177
>gi|395228152|ref|ZP_10406476.1| shikimate kinase II [Citrobacter sp. A1]
gi|424730649|ref|ZP_18159244.1| shikimate kinase ii [Citrobacter sp. L17]
gi|394718274|gb|EJF23911.1| shikimate kinase II [Citrobacter sp. A1]
gi|422894842|gb|EKU34649.1| shikimate kinase ii [Citrobacter sp. L17]
Length = 181
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFLVG G GKTT G L+ A+D+ F D+D++++ + T VA+I + G FR E
Sbjct: 3 QPLFLVGPRGCGKTTTGMALAKAIDFQFVDTDRWLQSHVQMT-VAEIVEREGWEGFRAQE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
+ ALQ ++ P VVATGGG ++ N +MR G+ ++L+ P+ L R+ A
Sbjct: 62 TIALQAVT-APATVVATGGGIILTEFNRHYMRSHGVVIYLSAPVSVLVDRLEA 113
>gi|451822102|ref|YP_007458303.1| shikimate kinase AroK [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451788081|gb|AGF59049.1| shikimate kinase AroK [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 172
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 91/156 (58%), Gaps = 7/156 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ ++GM GSGKTT+G++L++ L+ F D D+Y+ + G T++ Q+F E+GE +FR+ ES+
Sbjct: 5 IVIIGMPGSGKTTLGKMLAEELNIKFFDMDEYIVEKTGKTTI-QLF-ENGEEFFRDIESE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
++L+ +++TGGG + R N + ++G+ +F++ P+D + + V PLL
Sbjct: 63 TCKELAGYSNVLISTGGGVIKRKANIDTLNKEGLIIFIDRPVDNI---LGDVDVSFRPLL 119
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVSLL 251
D + K + AL E +E D+ + ++
Sbjct: 120 K-DGKEKLLKLYDERYALYNEYAEEIVKNDSDIRVV 154
>gi|423582446|ref|ZP_17558557.1| shikimate kinase [Bacillus cereus VD014]
gi|401213325|gb|EJR20066.1| shikimate kinase [Bacillus cereus VD014]
Length = 165
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ VE+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELQIDVVDTDQKVEEKQ-EKAIRNIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLRSLP-VHNVIITTGGGIIERAENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ K F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVKKFESRRAYYE---EAHIHIDTT 148
>gi|423426371|ref|ZP_17403402.1| shikimate kinase [Bacillus cereus BAG3X2-2]
gi|423437684|ref|ZP_17414665.1| shikimate kinase [Bacillus cereus BAG4X12-1]
gi|423503076|ref|ZP_17479668.1| shikimate kinase [Bacillus cereus HD73]
gi|401111118|gb|EJQ19017.1| shikimate kinase [Bacillus cereus BAG3X2-2]
gi|401120839|gb|EJQ28635.1| shikimate kinase [Bacillus cereus BAG4X12-1]
gi|402459297|gb|EJV91034.1| shikimate kinase [Bacillus cereus HD73]
Length = 165
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ ++ +IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELQMDVVDTDQKIEEKQ-EKAIRKIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLRALP-VHNVIITTGGGIIERAENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ K F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVKKFESRRAYYE---EAHIHIDTT 148
>gi|260578804|ref|ZP_05846711.1| shikimate kinase [Corynebacterium jeikeium ATCC 43734]
gi|258603102|gb|EEW16372.1| shikimate kinase [Corynebacterium jeikeium ATCC 43734]
Length = 185
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
LVG+ GSGKTT+G+ L++AL+ D+D +EK +G T QI E GE FRE E+ +
Sbjct: 7 LVGLPGSGKTTIGKRLANALNLQLVDTDHMLEKKLGKTC-NQIMGELGEPAFREQEAIVV 65
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDY- 217
+ +L +V+ GGGAVV + + V+LNV +D RR + G+++ PLL+
Sbjct: 66 AE-ALQTDGIVSLGGGAVVTESTRELLAEHTVVYLNVSIDEGVRRTS--GSNTRPLLNVA 122
Query: 218 DSADSYTKAFTALSALSKERSEAYANADA 246
D Y + F SA +E S D
Sbjct: 123 DPRGKYAQLFAQRSAFYEEVSNFMVRCDG 151
>gi|238784438|ref|ZP_04628447.1| Shikimate kinase 2 [Yersinia bercovieri ATCC 43970]
gi|238714607|gb|EEQ06610.1| Shikimate kinase 2 [Yersinia bercovieri ATCC 43970]
Length = 168
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
+VG G+GKTTVG+ L++AL Y F D+D ++++ + SVA++ G FR ES AL
Sbjct: 1 MVGARGAGKTTVGKALAEALGYRFIDTDLFMQQTL-QLSVAEVVAREGWDGFRLRESMAL 59
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRI 204
Q ++ P+ VVATGGGAV+ P N FMR G+ ++L + LA R+
Sbjct: 60 QTVT-APKTVVATGGGAVLTPKNRTFMRNHGLVIYLRASANVLAERL 105
>gi|338214778|ref|YP_004658841.1| shikimate kinase [Runella slithyformis DSM 19594]
gi|336308607|gb|AEI51709.1| Shikimate kinase [Runella slithyformis DSM 19594]
Length = 171
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 84/153 (54%), Gaps = 6/153 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG+ SGKTT+G+ L+ L Y F D+D + K G S+ IF + GE YFRE E++
Sbjct: 4 IFLVGLPSSGKTTLGKQLARQLRYRFVDTDVLIVK-EEGMSINAIFAQKGEPYFREAEAR 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+ + + +VATGGG N ++++ GI+VFL+V + + RI ++ P
Sbjct: 63 ILRAIRPDSKLIVATGGGVPYFHDNMAYIKENGISVFLDVAPEEIVDRIQRHSSNDRP-- 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
Y D T+ L ++R Y+ AD T+
Sbjct: 121 TYQKQD--TQLLENLQQRYRDRFPFYSQADFTL 151
>gi|229086807|ref|ZP_04218970.1| Shikimate kinase [Bacillus cereus Rock3-44]
gi|228696528|gb|EEL49350.1| Shikimate kinase [Bacillus cereus Rock3-44]
Length = 165
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 5/143 (3%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G +LS+ L D+D+ +E+ G T + IF GE FR+YE
Sbjct: 2 KSIYITGYMGAGKTTIGRVLSEHLHMPVVDTDQKIEEKQGKT-IRDIFTREGENTFRQYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ ++ L ++ TGGG V R N ++M++ G V+L +A R++ G + P
Sbjct: 61 SEVMRSLP-TSNVIITTGGGIVERAENRQWMKENGTVVYLYCDPYVIAERLS--GDTTRP 117
Query: 214 LLDYDSADSYTKAFTALSALSKE 236
L D+ +++ F A +E
Sbjct: 118 LFQKDNIEAFVAKFEGRRAFYEE 140
>gi|404493404|ref|YP_006717510.1| shikimate kinase [Pelobacter carbinolicus DSM 2380]
gi|115312133|sp|Q3A3N8.1|AROK1_PELCD RecName: Full=Shikimate kinase 1; Short=SK 1
gi|77545457|gb|ABA89019.1| shikimate kinase [Pelobacter carbinolicus DSM 2380]
Length = 170
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 69/115 (60%), Gaps = 9/115 (7%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTS---VAQIFKESGEAYFRE 152
++L+G SGKTT+G L+ L+Y F D+D+Y M TS VA++ + G FR
Sbjct: 4 TIYLIGARASGKTTIGRALASVLNYAFVDTDEY----MSATSHMTVAEVVAKEGWVGFRR 59
Query: 153 YESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
ES+AL ++ P+ V+ATGGG V+ N ++MR G +L+VP + +A R+ A
Sbjct: 60 RESEALHAVT-APKTVIATGGGMVLATANRKYMRAHGKVFYLHVPAEVMAERLKA 113
>gi|381405497|ref|ZP_09930181.1| shikimate kinase [Pantoea sp. Sc1]
gi|380738696|gb|EIB99759.1| shikimate kinase [Pantoea sp. Sc1]
Length = 174
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G G GKTTVG LS AL Y F D+D ++ +L SVA+I G FR E++
Sbjct: 5 IFLIGARGCGKTTVGVALSQALGYAFTDTDHHL-QLSTQRSVAEIVAAEGWEGFRARETE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRI 204
+LQ ++ P+ V+ATGGG ++ N RFMR QG ++L+ + LA R+
Sbjct: 64 SLQAVT-APRTVIATGGGMILAEENCRFMREQGQVIWLSASPEVLAERL 111
>gi|254501848|ref|ZP_05113999.1| shikimate kinase [Labrenzia alexandrii DFL-11]
gi|222437919|gb|EEE44598.1| shikimate kinase [Labrenzia alexandrii DFL-11]
Length = 205
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 28/207 (13%)
Query: 44 LKRHRTLNLVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMM 103
+K+H + P N D G D++D K L+ A G+ + + LVG+M
Sbjct: 1 MKKHENTQMSP-------NPAD---GRGADTVDLKHLVAALGK--------RSIVLVGIM 42
Query: 104 GSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSL 163
G GK+TVG+ L+ L F D+D +E+ +V++IF E GE YFR E + + +L
Sbjct: 43 GCGKSTVGKRLAQRLGLEFVDADSEIER-AANMTVSEIFSEHGEPYFRSGEERVIARLLQ 101
Query: 164 VPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADS 222
QV+ATGGGA + + G++++L V + + R+ T PLL +
Sbjct: 102 EGPQVLATGGGAFISDATRSEIETNGLSIWLKVDFETVMARVRRRSTR--PLLRNPDPEG 159
Query: 223 YTKAFTALSALSKERSEAYANADATVS 249
+ A ER YA A TV+
Sbjct: 160 TMRKLMA------EREPVYAQAQLTVT 180
>gi|404253800|ref|ZP_10957768.1| shikimate kinase [Sphingomonas sp. PAMC 26621]
Length = 187
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 82/157 (52%), Gaps = 10/157 (6%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
GQ + LVG+MG+GK+TVG L+ L F D+D +E G S+ IF+ GEAYFR+
Sbjct: 20 GQTIVLVGLMGAGKSTVGRRLAIRLGLPFVDADSEIET-AAGMSIPDIFERFGEAYFRDG 78
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWR-FMRQGITVFLNVPLDALARRIAAVGTDSF 212
E + + +L ++V+ATGGGA V + QG V+L+ LA R++ D+
Sbjct: 79 ERRVIARLMNGDRRVIATGGGAFVDDRTRETILAQGFAVWLDAKPSVLADRVSR--RDTR 136
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
PLL L L++ R+ YA A VS
Sbjct: 137 PLL------RGRDPLAVLEELARVRNPFYAMAPLRVS 167
>gi|421589459|ref|ZP_16034599.1| shikimate kinase [Rhizobium sp. Pop5]
gi|403705581|gb|EJZ21128.1| shikimate kinase [Rhizobium sp. Pop5]
Length = 196
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 19/180 (10%)
Query: 70 TFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYV 129
T DSL + V + L + L LVG+MG+GK+ VG I++ L F DSD +
Sbjct: 7 TVADSLKDR---------VRAALGSRNLILVGLMGAGKSAVGRIVASQLGIPFIDSDHEI 57
Query: 130 EKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-G 188
E++ ++A++F GE FR E++ +++L +VV+TGGGA + + +++ G
Sbjct: 58 ERV-SRMTIAELFAAYGEEEFRALETRVMKRLLKSGPRVVSTGGGAFINERTRKHIKKGG 116
Query: 189 ITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
++V+L L+ L R+ D+ PLL ++ L L R YA AD TV
Sbjct: 117 LSVWLKADLEVLWERVNK--RDTRPLLKTENPKQ------TLENLMTARYPIYAQADITV 168
>gi|313202168|ref|YP_004040826.1| shikimate kinase [Methylovorus sp. MP688]
gi|312441484|gb|ADQ85590.1| Shikimate kinase [Methylovorus sp. MP688]
Length = 168
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 2/105 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F VG+MG+GKTTVG +L+ L F DSD +E+ G S+ IF+ GEA FR ES
Sbjct: 5 IFFVGLMGAGKTTVGRVLAKHLHKAFYDSDHEIERRTG-VSIPYIFEVEGEAGFRRRESA 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDAL 200
+ +L +P VVATGGGAV+ N + ++Q G ++L ++ L
Sbjct: 64 MIDELVRMPDVVVATGGGAVLLDENRKNLKQHGTVIYLRAHVNEL 108
>gi|300715537|ref|YP_003740340.1| shikimate kinase [Erwinia billingiae Eb661]
gi|299061373|emb|CAX58482.1| Shikimate kinase 2 (SK 2) [Erwinia billingiae Eb661]
Length = 174
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 84/151 (55%), Gaps = 5/151 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L+L+G G GKTTVG+ L++AL Y F+D+D+Y+++ T VA I G FR+ E+
Sbjct: 5 LYLIGARGCGKTTVGQALANALGYAFSDTDRYLQQTTQRT-VADIVSAEGWEGFRQRETL 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGT-DSFPL 214
+L+ ++ P V+ATGGG V+ N +FMR QG ++L + LA R+ A D P
Sbjct: 64 SLKAVT-APATVIATGGGMVLAAENGKFMREQGRVIYLKADANVLAARLEAYPEQDQRPT 122
Query: 215 LD-YDSADSYTKAFTALSALSKERSEAYANA 244
L AD + A AL ++ + NA
Sbjct: 123 LTGRPIADEMVEVLAARDALYQQTAHYVINA 153
>gi|423411966|ref|ZP_17389086.1| shikimate kinase [Bacillus cereus BAG3O-2]
gi|423432248|ref|ZP_17409252.1| shikimate kinase [Bacillus cereus BAG4O-1]
gi|401104034|gb|EJQ12011.1| shikimate kinase [Bacillus cereus BAG3O-2]
gi|401117004|gb|EJQ24842.1| shikimate kinase [Bacillus cereus BAG4O-1]
Length = 165
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ ++ +IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELQMDVVDTDQKIEEKQ-EKAIRKIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLRALP-VHNVIITTGGGIIERAENRKWMKESGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ K F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVKKFESRRAYYE---EAHIHIDTT 148
>gi|399073365|ref|ZP_10750413.1| shikimate kinase [Caulobacter sp. AP07]
gi|398041731|gb|EJL34786.1| shikimate kinase [Caulobacter sp. AP07]
Length = 209
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 10/175 (5%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L + + LVG+MG GK++VG L+ ALD F D+D VE G T + +IF E GE
Sbjct: 26 AALRLRTIVLVGLMGVGKSSVGRRLATALDLPFRDADNEVEAAAGRT-IPEIFAEMGEPA 84
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVG 208
FR+ E + + +L P V+ATGGGA ++ + I V+L L+ LARR++
Sbjct: 85 FRDGERRVIARLLDEPPHVLATGGGAFANAETRALIKDKAIAVWLKADLELLARRVSR-- 142
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVL 263
+ PLL L ++ R AY A TV + A + ++ V+
Sbjct: 143 KEGRPLL------KGRDPMAVLREHAETRYPAYGEAHLTVETGDTAHSVAVEAVI 191
>gi|114199|sp|P10880.1|AROL_ERWCH RecName: Full=Shikimate kinase 2; Short=SK 2; AltName:
Full=Shikimate kinase II; Short=SKII
gi|4139965|pdb|1SHK|A Chain A, The Three-dimensional Structure Of Shikimate Kinase From
Erwinia Chrysanthemi
gi|4139970|pdb|2SHK|A Chain A, The Three-Dimensional Structure Of Shikimate Kinase From
Erwinia Chrysanthemi Complexed With Adp
gi|157880084|pdb|1SHK|B Chain B, The Three-dimensional Structure Of Shikimate Kinase From
Erwinia Chrysanthemi
gi|157884123|pdb|2SHK|B Chain B, The Three-Dimensional Structure Of Shikimate Kinase From
Erwinia Chrysanthemi Complexed With Adp
gi|42966|emb|CAA32883.1| shikimate kinase [Erwinia chrysanthemi]
Length = 173
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +F+VG G GKTTVG L+ AL Y F D+D +++ G +VA + G FR E
Sbjct: 3 EPIFMVGARGCGKTTVGRELARALGYEFVDTDIFMQH-TSGMTVADVVAAEGWPGFRRRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
S+ALQ ++ P +VVATGGG V+ N +FMR G V+L P + LA R+ A
Sbjct: 62 SEALQAVA-TPNRVVATGGGMVLLEQNRQFMRAHGTVVYLFAPAEELALRLQA 113
>gi|292493846|ref|YP_003529285.1| shikimate kinase [Nitrosococcus halophilus Nc4]
gi|291582441|gb|ADE16898.1| Shikimate kinase [Nitrosococcus halophilus Nc4]
Length = 182
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 96/195 (49%), Gaps = 35/195 (17%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GKTT+G L+ L F DSD+ +E G S+ IF+ GEA FR+ E K
Sbjct: 5 IFLVGPMGAGKTTLGRYLAKMLGRKFHDSDREIE-CRTGVSIPVIFEIEGEAGFRQRECK 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGIT-VFLNVPLDALARRIAAVGTDSFPLL 215
+ +L+ + ++ATGGGAV+ N + + QG T V+L + L RR V + PLL
Sbjct: 64 MIAELTQLSNIILATGGGAVLAIENRQRLAQGGTVVYLYASPEQLYRR--TVHDSNRPLL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTT------ 269
++ L L KER Y ++V DIT T
Sbjct: 122 QTEN------PLERLKRLLKERDPLY------------------REVADITIKTGERPIK 157
Query: 270 -IAMEVLVQAQKYLN 283
+A EVL Q ++Y N
Sbjct: 158 AVANEVLRQLKRYGN 172
>gi|227823253|ref|YP_002827225.1| shikimate kinase [Sinorhizobium fredii NGR234]
gi|227342254|gb|ACP26472.1| shikimate kinase [Sinorhizobium fredii NGR234]
Length = 195
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 16/162 (9%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L + L +G+MG+GK+ +G + + AL F DSD +E++ +V+++F GE F
Sbjct: 19 TLGKRNLIFIGLMGAGKSAIGRLTAQALGVPFVDSDHEIERV-SRMTVSELFAAYGEEEF 77
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ----GITVFLNVPLDALARRIAA 206
R E++ L++L +VV+TGGGA + N R RQ G+TV+LN L+ L R+
Sbjct: 78 RALEARVLKRLLRSGPRVVSTGGGAYI---NERSRRQIKKGGLTVWLNADLEVLWERVNK 134
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
D+ PLL ++ L L + R YA AD V
Sbjct: 135 --RDTRPLLKTENPKQ------TLENLMRARYPVYAEADLVV 168
>gi|339010360|ref|ZP_08642930.1| shikimate kinase [Brevibacillus laterosporus LMG 15441]
gi|338772515|gb|EGP32048.1| shikimate kinase [Brevibacillus laterosporus LMG 15441]
Length = 165
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GK+TVGE L+ L Y D D+ + K G T + QIF E GE FR+ E+
Sbjct: 6 IILIGFMGTGKSTVGEQLAQRLHYERCDLDEEIVKATGKT-IPQIFAEDGEEIFRQLETN 64
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRI 204
L++L ++V+ TGGGAV+RP N + M R G V L + RR+
Sbjct: 65 VLRQLVDGNRRVIITGGGAVLRPENVQIMLRHGRVVALTACEQEIIRRV 113
>gi|332286104|ref|YP_004418015.1| shikimate kinase [Pusillimonas sp. T7-7]
gi|330430057|gb|AEC21391.1| shikimate kinase [Pusillimonas sp. T7-7]
Length = 198
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 71/120 (59%), Gaps = 4/120 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+GMMG+GKTT+G L+ LD F D D +E G V+ IF GE FR+ ES
Sbjct: 29 IFLIGMMGAGKTTIGRHLARILDRDFVDLDHQLEARC-GVRVSLIFDIEGEEGFRKRESV 87
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
AL + S V+ATGGGAV+ N R++++ G+ V+L + L RR+A S PLL
Sbjct: 88 ALDECSQRCNIVLATGGGAVLASENQRYLKERGVVVYLRATAEELFRRVAR--DRSRPLL 145
>gi|293413639|ref|ZP_06656288.1| shikimate kinase [Escherichia coli B185]
gi|291433697|gb|EFF06670.1| shikimate kinase [Escherichia coli B185]
Length = 174
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 73/123 (59%), Gaps = 4/123 (3%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFL+G G GKTTVG L+D+L+ F D+D++++ + T VA+I + A FR E
Sbjct: 3 QPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT-VAEIVEREEWAGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRI-AAVGTDSF 212
+ AL+ ++ P V+ATGGG ++ N FM+ GI V+L P+ L R+ AA D
Sbjct: 62 TAALEAVT-APSTVIATGGGIILTEFNRHFMKNNGIVVYLCAPVSVLVNRLQAAPEEDLR 120
Query: 213 PLL 215
P L
Sbjct: 121 PTL 123
>gi|336404444|ref|ZP_08585139.1| shikimate kinase [Bacteroides sp. 1_1_30]
gi|335942241|gb|EGN04088.1| shikimate kinase [Bacteroides sp. 1_1_30]
Length = 175
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + ++ F D D Y+E+ T V ++F E GE FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARQMNIPFVDLDWYIEERFHKT-VGELFTERGETGFRELERN 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
L +++ V++TGGGA N FM R G TVFL+V D L RR+ V P+L
Sbjct: 63 MLHEVAEFENVVISTGGGAPCFFDNMDFMNRTGKTVFLDVHPDVLFRRL-RVAKQQRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
D KAF + AL K R+ Y A
Sbjct: 122 Q-GKEDDELKAFI-VQALEK-RAPFYHQA 147
>gi|255262136|ref|ZP_05341478.1| shikimate kinase [Thalassiobium sp. R2A62]
gi|255104471|gb|EET47145.1| shikimate kinase [Thalassiobium sp. R2A62]
Length = 182
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVGMMGSGKT VG LS L+ F DSD +E+ S+A+IF GE +FR+ E
Sbjct: 7 KTVVLVGMMGSGKTAVGRALSARLNVPFRDSDAEIEE-AAQRSIAEIFSRDGEPFFRDRE 65
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWR-FMRQGITVFLNVPLDALARRIAAVGTDSFP 213
++ +++L V++TGGGA + N +GI+V L+ L+ L R+ + D+ P
Sbjct: 66 AEVIERLLTDVPSVLSTGGGAFLAERNRTAITERGISVLLDADLNLLWDRVKS--KDTRP 123
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL + L+ + +RS Y AD V+
Sbjct: 124 LL------RTSNPRATLTQIFNDRSSIYGLADLAVA 153
>gi|118479415|ref|YP_896566.1| shikimate kinase [Bacillus thuringiensis str. Al Hakam]
gi|118418640|gb|ABK87059.1| shikimate kinase [Bacillus thuringiensis str. Al Hakam]
Length = 170
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 7 KSIYITGYMGAGKTTIGKALSKELHMDVVDTDQKIEEKQ-EKAILDIFAEEGEMAFREYE 65
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ GI V+L +A R+ T P
Sbjct: 66 SEMLRSLP-VRNAIITTGGGIIEREENRKWMKENGIVVYLYCDPHVIAERLREDTTR--P 122
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 123 LFQKKDIDAFVTKFESRRAYYE---EAHIHIDTT 153
>gi|260433973|ref|ZP_05787944.1| shikimate kinase [Silicibacter lacuscaerulensis ITI-1157]
gi|260417801|gb|EEX11060.1| shikimate kinase [Silicibacter lacuscaerulensis ITI-1157]
Length = 195
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 84/155 (54%), Gaps = 10/155 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + +VGMMG+GKT VG L+ L F DSD +E ++ +IF+ GEA+FR E
Sbjct: 21 KTVVMVGMMGAGKTAVGRALAARLGVPFLDSDAEIES-AANMTIPEIFERDGEAFFRAKE 79
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFP 213
S+ + +L + +++TGGGA + N R + +G++V+L L+ L R+ D+ P
Sbjct: 80 SQVIGRLLDEQKGILSTGGGAFLSEANRRMISERGVSVWLRADLEVLWNRVRH--KDTRP 137
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + D Y LSAL + R Y AD V
Sbjct: 138 LL--RTPDPY----ATLSALYQARVPLYQQADLVV 166
>gi|238795593|ref|ZP_04639108.1| Shikimate kinase 2 [Yersinia mollaretii ATCC 43969]
gi|238720712|gb|EEQ12513.1| Shikimate kinase 2 [Yersinia mollaretii ATCC 43969]
Length = 168
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
+VG G+GKTTVG+ L++AL Y F D+D ++++ + SVA++ G FR ES AL
Sbjct: 1 MVGARGAGKTTVGKALAEALGYRFIDTDLFMQQTL-QLSVAEVVAREGWDGFRLRESMAL 59
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIA 205
+ ++ P+ VVATGGGAV+ P N FMR G+ ++L + LA R+A
Sbjct: 60 ETVT-APKTVVATGGGAVLTPKNRTFMRNHGLVIYLRASANILAERLA 106
>gi|46579305|ref|YP_010113.1| shikimate kinase [Desulfovibrio vulgaris str. Hildenborough]
gi|120603135|ref|YP_967535.1| shikimate kinase [Desulfovibrio vulgaris DP4]
gi|387152688|ref|YP_005701624.1| shikimate kinase [Desulfovibrio vulgaris RCH1]
gi|81404948|sp|Q72DN7.1|AROK_DESVH RecName: Full=Shikimate kinase; Short=SK
gi|46448719|gb|AAS95372.1| shikimate kinase [Desulfovibrio vulgaris str. Hildenborough]
gi|120563364|gb|ABM29108.1| shikimate kinase [Desulfovibrio vulgaris DP4]
gi|311233132|gb|ADP85986.1| Shikimate kinase [Desulfovibrio vulgaris RCH1]
Length = 175
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G SGK+TVG L+ L + FAD+D V + G +A + E G FR+ ES
Sbjct: 8 VFLIGGRASGKSTVGRALAARLGWDFADTDAMVTR-RAGCDIATLVAERGWDAFRDMESD 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIA 205
AL+ + + VVATGGG V+R N +R+ G+TVFL++P++ +A R+A
Sbjct: 67 ALRDAAARERVVVATGGGMVLRAENRALLREAGVTVFLSLPVEVVAARLA 116
>gi|338980486|ref|ZP_08631758.1| 3-dehydroquinate synthase [Acidiphilium sp. PM]
gi|338208614|gb|EGO96461.1| 3-dehydroquinate synthase [Acidiphilium sp. PM]
Length = 536
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+G+MG+GK+ VG L+ L F DSD +E G T VA IF GEA FR E
Sbjct: 2 RSIVLIGLMGAGKSAVGRRLAAQLALPFHDSDAEIEAAAGKT-VADIFASEGEAAFRARE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
+ +L P V+ATGGGA + P +R + I+V+L LD L R+ G P
Sbjct: 61 RAMIAELLAGPPIVLATGGGAFMDPETRAVIRARAISVWLRATLDVLLARVR--GRTHRP 118
Query: 214 LLDY-DSADSYTKAFTALSALSKERSEAYANADATV 248
LL+ D A+ LS LS R+ YA AD V
Sbjct: 119 LLNQGDPAE-------ILSRLSALRAPVYAEADIIV 147
>gi|194336818|ref|YP_002018612.1| shikimate kinase [Pelodictyon phaeoclathratiforme BU-1]
gi|194309295|gb|ACF43995.1| Shikimate kinase [Pelodictyon phaeoclathratiforme BU-1]
Length = 264
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 6/155 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G GSGK+T+G +L+++L Y F D D+ +E+ G T + +IF E GE +FR E +
Sbjct: 81 IFLTGFSGSGKSTIGPLLANSLGYEFVDLDQSIEQDTGKT-ITRIFAEEGEEFFRALELQ 139
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L L +++ GGGA+ L + +++ G V+L P LARR+ TD PLL
Sbjct: 140 RLSALVTQNNMIISLGGGALENDLAYALIQKSGTLVYLKSPSKTLARRLCN-KTDR-PLL 197
Query: 216 DYDSADSYTKAFT--ALSALSKERSEAYANADATV 248
+ ++ +S + +R Y +AD TV
Sbjct: 198 RGEKGRKLSREEIEEKISTILAKREPRYESADITV 232
>gi|424886619|ref|ZP_18310227.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393175970|gb|EJC76012.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 196
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Query: 81 LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQ 140
LK + R + L + L LVG+MG+GK+ VG I++ L F DSD +E++ ++A+
Sbjct: 12 LKDRAR---AALGSRNLILVGLMGAGKSAVGRIVASQLGIPFIDSDHEIERV-SRMTIAE 67
Query: 141 IFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDA 199
+F GE FR E++ +++L +VV+TGGGA + R + + G++V+L L+
Sbjct: 68 LFAAYGEDEFRALETRVMKRLLKSGPRVVSTGGGAFINERTRRHISKGGVSVWLKADLEV 127
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
L R+ D+ PLL ++ L L R YA AD TV
Sbjct: 128 LWERVNK--RDTRPLLKTENPKQ------TLEGLMNARYPIYAQADLTV 168
>gi|378827235|ref|YP_005189967.1| protein AroK [Sinorhizobium fredii HH103]
gi|365180287|emb|CCE97142.1| aroK [Sinorhizobium fredii HH103]
Length = 195
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 16/162 (9%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L + L +G+MG+GK+ +G + + AL F DSD +E++ +V+++F GE F
Sbjct: 19 TLGKRNLIFIGLMGAGKSAIGRLTAQALGIPFVDSDHEIERV-SRMTVSELFAAYGEEEF 77
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ----GITVFLNVPLDALARRIAA 206
R E++ L++L +VV+TGGGA + N R RQ G+TV+LN ++ L R+
Sbjct: 78 RALEARVLKRLLRSGPRVVSTGGGAYI---NERSRRQIKKGGLTVWLNADIEVLWERVNK 134
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
DS PLL ++ L L + R YA AD V
Sbjct: 135 --RDSRPLLKTENPKQ------TLENLMRARYPIYAEADLVV 168
>gi|452751532|ref|ZP_21951277.1| Shikimate kinase I [alpha proteobacterium JLT2015]
gi|451960751|gb|EMD83162.1| Shikimate kinase I [alpha proteobacterium JLT2015]
Length = 189
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVG+MG+GK+T+G L+ L F D+D+ +E G SV++IF GEA+FR+ E +
Sbjct: 22 IMLVGLMGAGKSTIGRRLARRLSLPFVDADEEIEA-AAGLSVSEIFARFGEAHFRDGERR 80
Query: 157 ALQKLSLVPQQVVATGGGAVV-RPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
+ +L +QV+ATGGGA V + GIT++++ ++ L R++ D+ PLL
Sbjct: 81 VIARLMEGRRQVIATGGGAFVDDETRAAMLASGITIWVDADIEVLIERVSR--RDTRPLL 138
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
+ + AL+K R+ YA A
Sbjct: 139 AGQDRGAVMR------ALAKARAPRYAEA 161
>gi|17547689|ref|NP_521091.1| shikimate kinase [Ralstonia solanacearum GMI1000]
gi|81503041|sp|Q8XV61.1|AROK_RALSO RecName: Full=Shikimate kinase; Short=SK
gi|17429994|emb|CAD16679.1| probable shikimate kinaseIprotein [Ralstonia solanacearum GMI1000]
Length = 190
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F VG+MG+GKTTVG ++ LD F DSD +E G V IF+ GE FR+ E++
Sbjct: 6 VFFVGLMGAGKTTVGRAVARRLDLPFFDSDHEIEARCG-VRVPVIFEHEGEMGFRDRETQ 64
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFL 193
+ +L+ VVATGGGAV+RP N F+R+ G ++L
Sbjct: 65 MIDELTARHGVVVATGGGAVLRPENRAFLRERGTVIYL 102
>gi|77163787|ref|YP_342312.1| shikimate kinase [Nitrosococcus oceani ATCC 19707]
gi|254436246|ref|ZP_05049753.1| shikimate kinase [Nitrosococcus oceani AFC27]
gi|115312155|sp|Q3JEG4.1|AROK_NITOC RecName: Full=Shikimate kinase; Short=SK
gi|76882101|gb|ABA56782.1| shikimate kinase [Nitrosococcus oceani ATCC 19707]
gi|207089357|gb|EDZ66629.1| shikimate kinase [Nitrosococcus oceani AFC27]
Length = 190
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MGSGKTT+G L+ F DSD+ +E G S+ IF+ GE+ FR+ E K
Sbjct: 6 IFLVGPMGSGKTTIGRYLARITGKNFYDSDREIESRT-GVSIPVIFEIEGESGFRQRECK 64
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+ +L + V+ATGGGAV+ N R + Q GI V+L P L RR + ++ PLL
Sbjct: 65 IIAELVQLNNIVLATGGGAVLAAENRRELSQRGIVVYLYAPPKQLYRRTSH--DNNRPLL 122
Query: 216 DYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACIGLKDVLDITPTTIAMEV 274
+ L L KER Y AD + G + V +A EV
Sbjct: 123 RTGN------PLERLKCLLKERDPLYREVADVIIK-------TGKQPV-----KAVANEV 164
Query: 275 LVQAQKY 281
L Q ++Y
Sbjct: 165 LRQLRQY 171
>gi|16127238|ref|NP_421802.1| shikimate kinase [Caulobacter crescentus CB15]
gi|221236039|ref|YP_002518476.1| shikimate kinase [Caulobacter crescentus NA1000]
gi|81534559|sp|Q9A435.1|AROK_CAUCR RecName: Full=Shikimate kinase; Short=SK
gi|254806772|sp|B8H331.1|AROK_CAUCN RecName: Full=Shikimate kinase; Short=SK
gi|13424646|gb|AAK24970.1| shikimate kinase [Caulobacter crescentus CB15]
gi|220965212|gb|ACL96568.1| shikimate kinase [Caulobacter crescentus NA1000]
Length = 200
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L + + LVG+MG GK++VG L++ L F D+D VE G S+++IF E GE
Sbjct: 27 APLRAKTIVLVGLMGVGKSSVGRRLANVLGLPFRDADNEVEA-AAGRSISEIFAELGEPA 85
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVG 208
FR+ E + + +L P V+ATGGGA V + + ++V+L ++ LARR++
Sbjct: 86 FRDGERRVIARLLDEPPHVLATGGGAFVNAETRALINEKAVSVWLKADVELLARRVSR-- 143
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVL 263
D+ PL+ L+ L++ R AYA A V + + ++ +L
Sbjct: 144 KDNRPLV------RGKDPVKVLTELAEARYPAYAEAQVHVETGDTPHMVAVEAIL 192
>gi|357030301|ref|ZP_09092253.1| hypothetical protein MEA186_35734, partial [Mesorhizobium amorphae
CCNWGS0123]
gi|355532803|gb|EHH02167.1| hypothetical protein MEA186_35734, partial [Mesorhizobium amorphae
CCNWGS0123]
Length = 944
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 10/165 (6%)
Query: 85 GREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKE 144
+E+ + L+G+ + LVGM +GK+++G L+ L F D+DK ++K S++QIF+
Sbjct: 741 AKEIFAALNGRPVVLVGMPSAGKSSIGPALARRLRLPFVDTDKIIQKDTR-ISISQIFEV 799
Query: 145 SGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARR 203
GEA+FR+ E+ + L V+ATGGGA +R + + + ++++L+ LD + +R
Sbjct: 800 HGEAFFRDMEAGVIADLLQKGPAVIATGGGAFMREQSRHLIGEKAVSIWLDTRLDVIEKR 859
Query: 204 IAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
S PLL + + ++ L ER YA AD TV
Sbjct: 860 TR--NDTSRPLLQGPNPEQ------KIARLLSERRPFYAQADITV 896
>gi|357038670|ref|ZP_09100467.1| Shikimate kinase [Desulfotomaculum gibsoniae DSM 7213]
gi|355359462|gb|EHG07224.1| Shikimate kinase [Desulfotomaculum gibsoniae DSM 7213]
Length = 172
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 10/153 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GK+++G L+ L Y F D+D +EK+ G T VAQIF++ GE FR E
Sbjct: 5 IILIGFMGTGKSSLGRRLARRLGYKFIDTDSAIEKVTGKT-VAQIFRKDGEIRFRSEEKL 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
++KLS VVATGGG V+ N ++Q GI + L + + +R+ PLL
Sbjct: 64 QVRKLSGQSGLVVATGGGTVLDQENVDLLKQNGIFICLRADPEIILQRVK--NKKRRPLL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
S + ++ L KER +Y A+ TV
Sbjct: 122 ------SRGDLWENITRLLKERDSSYEIAELTV 148
>gi|225866217|ref|YP_002751595.1| shikimate kinase [Bacillus cereus 03BB102]
gi|254806766|sp|C1ERV8.1|AROK_BACC3 RecName: Full=Shikimate kinase; Short=SK
gi|225788330|gb|ACO28547.1| shikimate kinase [Bacillus cereus 03BB102]
Length = 165
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELHMDVVDTDQKIEEKQ-EKAILDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ GI V+L +A R+ T P
Sbjct: 61 SEMLRSLP-VRNAIITTGGGIIEREENRKWMKENGIVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVTKFESRQAYYE---EAHIHIDTT 148
>gi|433462214|ref|ZP_20419803.1| shikimate kinase [Halobacillus sp. BAB-2008]
gi|432189103|gb|ELK46236.1| shikimate kinase [Halobacillus sp. BAB-2008]
Length = 160
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 92/180 (51%), Gaps = 26/180 (14%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+F+VG MGSGKTTV E L +A Y + D+ +E+L G T + ++F+ GEAYFR E+
Sbjct: 1 MIFIVGFMGSGKTTVAEQLGEATGYKAVEMDREIERLEGMT-IPEMFERYGEAYFRSAET 59
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
+ L+ L +V+TGGG +++ N R + +G V+L + + R+A G + PL
Sbjct: 60 RFLKGLH--GDGIVSTGGGVILQEENRRILAEGTVVYLRAEWETITARLA--GDKNRPLW 115
Query: 216 DYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACIGLKDVLDITPTTIAMEV 274
S+D K F +ER Y AD T+ DV +P IA E+
Sbjct: 116 SGASSDK-QKRF-------QERLPYYKEVADITI------------DVDKKSPQVIAEEI 155
>gi|329851120|ref|ZP_08265877.1| shikimate kinase family protein [Asticcacaulis biprosthecum C19]
gi|328839966|gb|EGF89538.1| shikimate kinase family protein [Asticcacaulis biprosthecum C19]
Length = 194
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVG+MG GKTT+G+ L++ F D+D+ +EK G SVA IF GE FR+ E
Sbjct: 23 KTVALVGLMGVGKTTIGKRLAEHFALPFVDADEEIEK-AAGQSVADIFAHYGEKGFRDGE 81
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
+ + +L P Q++ATGGGA+ ++ + ITV+L L L+RR+A P
Sbjct: 82 ERVISRLLDSPPQILATGGGALTSAKTRENLKAKAITVWLKTDLKVLSRRVA--NKPHRP 139
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL S L +K R Y AD V
Sbjct: 140 LLKDRS------PMDVLREHAKTRYPLYQMADVVV 168
>gi|302877408|ref|YP_003845972.1| shikimate kinase [Gallionella capsiferriformans ES-2]
gi|302580197|gb|ADL54208.1| Shikimate kinase [Gallionella capsiferriformans ES-2]
Length = 187
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L LVGMMGSGKTT+G IL+ L+ F DSD+ ++ G ++ IF GE FR+ E+
Sbjct: 17 LILVGMMGSGKTTMGRILARHLNKVFVDSDEEIQ-FRTGVTIPHIFDVEGEPGFRQRETD 75
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFL 193
AL L + V+ATGGGAV+ P N M + GI ++L
Sbjct: 76 ALAALVVRNDLVLATGGGAVLAPENRAMMSENGIVIYL 113
>gi|416963599|ref|ZP_11936491.1| shikimate kinase [Burkholderia sp. TJI49]
gi|325521796|gb|EGD00532.1| shikimate kinase [Burkholderia sp. TJI49]
Length = 184
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F VG+MG+GKTTVG ++ LD TF DSD +E G + IF+ GEA FR+ E++
Sbjct: 10 VFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEIEARTGA-RIPVIFELEGEAGFRDRETQ 68
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFL 193
+ L+ V+ATGGGAV+RP N ++Q GI V+L
Sbjct: 69 VIADLTQRESIVLATGGGAVLRPENRECLKQHGIVVYL 106
>gi|414341302|ref|YP_006982823.1| shikimate kinase [Gluconobacter oxydans H24]
gi|411026637|gb|AFV99891.1| shikimate kinase [Gluconobacter oxydans H24]
Length = 533
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 102 MMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKL 161
MMG+GKTTVG L+ F D+D +E+ G ++ +IF GEAYFR E + +Q+L
Sbjct: 1 MMGAGKTTVGRRLAQVYGLPFVDADAEIER-AAGCTIPEIFARHGEAYFRAGERRVIQRL 59
Query: 162 SLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLLDYDSA 220
P ++ATGGGA + + +R+ ++V+L P+ L RR+ G PLL S
Sbjct: 60 IKGPPCILATGGGAWMDTQTRQLVRRHAVSVWLRAPVHVLLRRVH--GRGGRPLLAQGSP 117
Query: 221 DSYTKAFTALSALSKERSEAYANADATV 248
+ ++ L R YA AD +
Sbjct: 118 EDI------MTRLVGVRYPVYAEADIII 139
>gi|403745008|ref|ZP_10954036.1| Shikimate kinase [Alicyclobacillus hesperidum URH17-3-68]
gi|403121663|gb|EJY55940.1| Shikimate kinase [Alicyclobacillus hesperidum URH17-3-68]
Length = 175
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L L+G M SGK+TVGE+++ LD F D D+YVE MG T + IF GE FR E
Sbjct: 5 QRLALIGFMASGKSTVGEVVATRLDVPFVDLDRYVETKMGMT-IPDIFVTLGEQRFRAIE 63
Query: 155 SKALQKLSLVPQQVV-ATGGGAVVRPLNWRFMRQGI-TVFLNVPLDALARRIAAVGTDSF 212
S+AL + Q VV ATGGGA+V P+N ++ TV+L + + R+ T
Sbjct: 64 SEALHAIGRDMQCVVLATGGGAIVHPVNRELLKASFTTVYLRAKPETILDRLKNAATQR- 122
Query: 213 PLL 215
PLL
Sbjct: 123 PLL 125
>gi|33599064|ref|NP_886624.1| shikimate kinase [Bordetella bronchiseptica RB50]
gi|81580333|sp|Q7WR85.1|AROK_BORBR RecName: Full=Shikimate kinase; Short=SK
gi|33575110|emb|CAE30573.1| shikimate kinase I [Bordetella bronchiseptica RB50]
Length = 211
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVGMMG+GKTT+G L+ AL F D D +E G V IF+ GEA FR E+
Sbjct: 43 IFLVGMMGAGKTTIGRGLARALRREFIDLDHELEARCG-VRVPVIFEIEGEAGFRRREAA 101
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
ALQ+ + Q ++ATGGGAV+ N + +R+ GI ++L ++ L RR
Sbjct: 102 ALQECTQRRQIILATGGGAVLAAENRQALRERGIVIYLRASVEELFRR 149
>gi|390451693|ref|ZP_10237262.1| shikimate kinase [Nitratireductor aquibiodomus RA22]
gi|389660709|gb|EIM72370.1| shikimate kinase [Nitratireductor aquibiodomus RA22]
Length = 206
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 10/177 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+A L + L VG+MG+GKT +G ++DAL F DSD +E + +V +F GE
Sbjct: 15 LAHRLGRRSLVFVGLMGAGKTVIGRRVADALKLPFIDSDHEIETV-SRMTVPDLFAAYGE 73
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
+ FR E + + +L +VV+TGGGA + R + R+GI+V+L L L R+
Sbjct: 74 SEFRSLERRVIARLLKSGPRVVSTGGGAFMSAQTRRAVARRGISVWLKADLPTLMERVGR 133
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVL 263
+ PLL+ D + + L ER YA AD V N A + + +V+
Sbjct: 134 --RSNRPLLNNDDPEG------VMRRLMDERYPLYAEADIVVHSRNEAKEVIVAEVI 182
>gi|409441768|ref|ZP_11268639.1| Shikimate kinase [Rhizobium mesoamericanum STM3625]
gi|408746760|emb|CCM79875.1| Shikimate kinase [Rhizobium mesoamericanum STM3625]
Length = 191
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G C+ L+GMMGSGKT+VG L+ L F D+D +E T + +IF + GE YFR+
Sbjct: 17 GCCIVLIGMMGSGKTSVGRPLAGRLGLDFIDADAEIEAAHRMT-IPEIFAQHGETYFRDV 75
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRP-LNWRFMRQGITVFLNVPLDALARRIAAVGTDSF 212
E + L +L ++VVATGGGA + R +G++++L D L RR+ +
Sbjct: 76 ERRMLARLLAEGRKVVATGGGAFMNAETRARIAEKGVSIWLKADFDGLIRRVRR--RANR 133
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
PLL + AL L +R YA AD TV
Sbjct: 134 PLLQTRDPEG------ALRKLIDDRYPIYALADVTV 163
>gi|453330577|dbj|GAC87323.1| shikimate kinase [Gluconobacter thailandicus NBRC 3255]
Length = 533
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 102 MMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKL 161
MMG+GKTTVG L+ F D+D +E+ G ++ +IF GEAYFR E + +Q+L
Sbjct: 1 MMGAGKTTVGRRLAQVYGLPFVDADAEIER-AAGCTIPEIFARHGEAYFRAGERRVIQRL 59
Query: 162 SLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLLDYDSA 220
P ++ATGGGA + + +R+ ++V+L P+ L RR+ G PLL S
Sbjct: 60 IKGPPCILATGGGAWMDTQTRQLVRRHAVSVWLRAPVHVLLRRVH--GRGGRPLLAQGSP 117
Query: 221 DSYTKAFTALSALSKERSEAYANADATV 248
+ ++ L R YA AD +
Sbjct: 118 EDI------MTRLVGVRYPVYAEADIII 139
>gi|417537029|ref|ZP_12190022.1| Shikimate kinase 3, partial [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|353669181|gb|EHD06159.1| Shikimate kinase 3, partial [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
Length = 176
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+LVG G GKTT+G L+ A + FAD+D++++ + SVA I ++ G FR E
Sbjct: 3 QPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV-QMSVADIVEKEGWGGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
S AL+ +S P VVATGGG ++ N R+M R G+ ++L P+ L R+ A
Sbjct: 62 SAALEAVS-APSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVNRLEA 113
>gi|33594520|ref|NP_882164.1| shikimate kinase [Bordetella pertussis Tohama I]
gi|33594792|ref|NP_882435.1| shikimate kinase [Bordetella parapertussis 12822]
gi|384205817|ref|YP_005591556.1| shikimate kinase [Bordetella pertussis CS]
gi|408416755|ref|YP_006627462.1| shikimate kinase I [Bordetella pertussis 18323]
gi|410470885|ref|YP_006894166.1| shikimate kinase I [Bordetella parapertussis Bpp5]
gi|412340627|ref|YP_006969382.1| shikimate kinase I [Bordetella bronchiseptica 253]
gi|427812324|ref|ZP_18979388.1| shikimate kinase I [Bordetella bronchiseptica 1289]
gi|427817373|ref|ZP_18984436.1| shikimate kinase I [Bordetella bronchiseptica D445]
gi|427823111|ref|ZP_18990173.1| shikimate kinase I [Bordetella bronchiseptica Bbr77]
gi|81578314|sp|Q7VT94.1|AROK_BORPE RecName: Full=Shikimate kinase; Short=SK
gi|81578957|sp|Q7W2B7.1|AROK_BORPA RecName: Full=Shikimate kinase; Short=SK
gi|33564596|emb|CAE43913.1| shikimate kinase I [Bordetella pertussis Tohama I]
gi|33564868|emb|CAE39812.1| shikimate kinase I [Bordetella parapertussis]
gi|332383931|gb|AEE68778.1| shikimate kinase [Bordetella pertussis CS]
gi|401778925|emb|CCJ64394.1| shikimate kinase I [Bordetella pertussis 18323]
gi|408440995|emb|CCJ47404.1| shikimate kinase I [Bordetella parapertussis Bpp5]
gi|408770461|emb|CCJ55255.1| shikimate kinase I [Bordetella bronchiseptica 253]
gi|410563324|emb|CCN20858.1| shikimate kinase I [Bordetella bronchiseptica 1289]
gi|410568373|emb|CCN16408.1| shikimate kinase I [Bordetella bronchiseptica D445]
gi|410588376|emb|CCN03433.1| shikimate kinase I [Bordetella bronchiseptica Bbr77]
Length = 211
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVGMMG+GKTT+G L+ AL F D D +E G V IF+ GEA FR E+
Sbjct: 43 IFLVGMMGAGKTTIGRGLARALRREFIDLDHELEARCG-VRVPVIFEIEGEAGFRRREAA 101
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
ALQ+ + Q ++ATGGGAV+ N + +R+ GI ++L ++ L RR
Sbjct: 102 ALQECTQRRQIILATGGGAVLAAENRQALRERGIVIYLRASVEELFRR 149
>gi|404495838|ref|YP_006719944.1| shikimate kinase [Geobacter metallireducens GS-15]
gi|418067761|ref|ZP_12705095.1| Shikimate kinase [Geobacter metallireducens RCH3]
gi|373558265|gb|EHP84617.1| Shikimate kinase [Geobacter metallireducens RCH3]
gi|403378002|gb|ABB31219.2| shikimate kinase [Geobacter metallireducens GS-15]
Length = 179
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 87/150 (58%), Gaps = 10/150 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L G MG+GK++VG +L+ L + + D D + + G S+ +IF GE +FR E++
Sbjct: 15 VILTGFMGTGKSSVGRLLAHRLGFRYCDLDALIVE-GEGVSINEIFARHGEPHFRALETE 73
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A++ +S + VV+TGGGAV+ P N +R+ G+ V L ++ + RR+ TD PLL
Sbjct: 74 AVRSVSREERCVVSTGGGAVISPENRCLLRKAGVVVNLTATVEEVCRRLRE-ETDR-PLL 131
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANAD 245
D ++ ++A+ ER + YA+A+
Sbjct: 132 KDD------RSGERIAAMMAEREQFYADAE 155
>gi|167764114|ref|ZP_02436241.1| hypothetical protein BACSTE_02497 [Bacteroides stercoris ATCC
43183]
gi|167698230|gb|EDS14809.1| shikimate kinase [Bacteroides stercoris ATCC 43183]
Length = 175
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + L+ F D D Y+E+ S+ ++F E GEA FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARELNVPFIDLDWYIEERF-HKSIRELFVERGEASFRELERN 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
L ++S +++TGGG N +M G TVFL+V LD L R+ V T P+L
Sbjct: 63 MLHEVSEFEDVIISTGGGTPCFFDNMDYMNGHGQTVFLDVHLDILFNRL-RVATHQRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
D +AF A AL K R+ Y A
Sbjct: 122 Q-GKTDEELRAFIA-DALEK-RAPFYVQA 147
>gi|49478589|ref|YP_038296.1| shikimate kinase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|196041622|ref|ZP_03108914.1| shikimate kinase [Bacillus cereus NVH0597-99]
gi|196046370|ref|ZP_03113596.1| shikimate kinase [Bacillus cereus 03BB108]
gi|376268133|ref|YP_005120845.1| shikimate kinase [Bacillus cereus F837/76]
gi|49330145|gb|AAT60791.1| shikimate kinase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|196022840|gb|EDX61521.1| shikimate kinase [Bacillus cereus 03BB108]
gi|196027610|gb|EDX66225.1| shikimate kinase [Bacillus cereus NVH0597-99]
gi|364513934|gb|AEW57333.1| Shikimate kinase I [Bacillus cereus F837/76]
Length = 165
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELHMDVVDTDQKIEEKQ-EKAILDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ GI V+L +A R+ T P
Sbjct: 61 SEMLRSLP-VRNAIITTGGGIIEREENRKWMKENGIVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVTKFESRRAYYE---EAHIHIDTT 148
>gi|115312149|sp|Q39X05.1|AROK_GEOMG RecName: Full=Shikimate kinase; Short=SK
Length = 168
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 87/150 (58%), Gaps = 10/150 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L G MG+GK++VG +L+ L + + D D + + G S+ +IF GE +FR E++
Sbjct: 4 VILTGFMGTGKSSVGRLLAHRLGFRYCDLDALIVE-GEGVSINEIFARHGEPHFRALETE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A++ +S + VV+TGGGAV+ P N +R+ G+ V L ++ + RR+ TD PLL
Sbjct: 63 AVRSVSREERCVVSTGGGAVISPENRCLLRKAGVVVNLTATVEEVCRRLRE-ETDR-PLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANAD 245
D ++ ++A+ ER + YA+A+
Sbjct: 121 KDD------RSGERIAAMMAEREQFYADAE 144
>gi|91785420|ref|YP_560626.1| shikimate kinase [Burkholderia xenovorans LB400]
gi|91689374|gb|ABE32574.1| shikimate kinase [Burkholderia xenovorans LB400]
Length = 183
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F VG+MG+GKTTVG ++ LD F DSD +E G + IF+ GEA FRE E+
Sbjct: 10 VFFVGLMGAGKTTVGRAIARRLDRPFFDSDHEIEARTG-ARIPVIFELEGEAGFREREAN 68
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFL 193
+ +L+ V+ATGGGAV+RP N +R +G+ ++L
Sbjct: 69 VISELTARENIVLATGGGAVLRPENREALRNRGVVIYL 106
>gi|94495772|ref|ZP_01302352.1| Shikimate kinase [Sphingomonas sp. SKA58]
gi|94425160|gb|EAT10181.1| Shikimate kinase [Sphingomonas sp. SKA58]
Length = 182
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 12/150 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVGMMG GK+TVG L+ L F D+D+ +EK SV++IF+ GEAYFR+ E +
Sbjct: 17 IVLVGMMGVGKSTVGRRLAARLGLAFVDADEEIEK-AADMSVSEIFERYGEAYFRDGERR 75
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRF-MRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
+ +L +V+ATGGGA ++ R + I ++L+ +D L R++ DS PLL
Sbjct: 76 VIARLLDGAPKVIATGGGAFMQDETRRLILDAAIAIWLDADIDILVDRVSR--RDSRPLL 133
Query: 216 -DYDSADSYTKAFTALSALSKERSEAYANA 244
D D T L+ L+ R+ YA A
Sbjct: 134 KDRDPR-------TVLTELAAIRNPVYALA 156
>gi|407975243|ref|ZP_11156149.1| shikimate kinase [Nitratireductor indicus C115]
gi|407429328|gb|EKF42006.1| shikimate kinase [Nitratireductor indicus C115]
Length = 207
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 88/178 (49%), Gaps = 10/178 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+A L + + VG+MG+GKT +G +++ L F DSD +E + T VA +F GE
Sbjct: 15 IAQKLGNRSIVFVGLMGAGKTVIGRKVAEMLGLAFIDSDHEIETVSRMT-VADLFSSYGE 73
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
A FR E + + +L +VV+TGGGA V R + R+GI+++L L L R+
Sbjct: 74 AEFRSLERRVIARLLKSGPRVVSTGGGAFVNAQTRRAVARRGISIWLKADLPTLMERVGR 133
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLD 264
T PLL+ +S + L ER YA AD V N + +V+D
Sbjct: 134 KSTR--PLLNNQDPES------VMRRLMDERYPLYAEADIVVHSRNEPKDVIAGEVVD 183
>gi|325983382|ref|YP_004295784.1| shikimate kinase [Nitrosomonas sp. AL212]
gi|325532901|gb|ADZ27622.1| Shikimate kinase [Nitrosomonas sp. AL212]
Length = 559
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVGMMG+GKTT+G+ LS++L F DSD +++ G + IF+ GEA FR+ ES+
Sbjct: 14 IILVGMMGAGKTTIGKALSNSLCKAFVDSDHEIQR-RTGVKIPVIFEIEGEAGFRKRESE 72
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
L + ++ATGGGAV+ N + +RQ GI ++L ++ L RR
Sbjct: 73 VLAGMVEKKNIILATGGGAVLNAENRQLLRQGGIVIYLRASVNDLYRR 120
>gi|110639599|ref|YP_679809.1| shikimate kinase [Cytophaga hutchinsonii ATCC 33406]
gi|110282280|gb|ABG60466.1| shikimate kinase [Cytophaga hutchinsonii ATCC 33406]
Length = 172
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYV---EKLMGGTSVAQIFKESGEAYFREY 153
++L+G+ GSGK+T+G+ L+ L YTF D D + EK ++ +IF + GE YFRE
Sbjct: 3 IYLIGLPGSGKSTIGKTLAQKLKYTFFDMDDAICAQEK----KTIEEIFADKGENYFREL 58
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSF 212
E L + +++TGGG N M++ G+T+F+N D LA R+ G +
Sbjct: 59 EHSILHDTFELKNAIISTGGGVPCYFDNITEMKKHGLTIFINPSADELANRLVGQGGQNR 118
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAA 255
P+L ++ + + +ER+ Y A S L A
Sbjct: 119 PML---KGKTHKQVLDFIETKYRERAPYYEQAKLIFSTNKLNA 158
>gi|410417885|ref|YP_006898334.1| shikimate kinase I [Bordetella bronchiseptica MO149]
gi|408445180|emb|CCJ56828.1| shikimate kinase I [Bordetella bronchiseptica MO149]
Length = 211
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVGMMG+GKTT+G L+ AL F D D +E G V IF+ GEA FR E+
Sbjct: 43 IFLVGMMGAGKTTIGRGLARALRREFIDLDHELEARCG-VRVPVIFEIEGEAGFRRREAA 101
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
ALQ+ + Q ++ATGGGAV+ N + +R+ GI ++L ++ L RR
Sbjct: 102 ALQECTQRRQIILATGGGAVLAAENRQALRERGIVIYLRASVEELFRR 149
>gi|220936187|ref|YP_002515086.1| Shikimate kinase [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254806785|sp|B8GPV2.1|AROK_THISH RecName: Full=Shikimate kinase; Short=SK
gi|219997497|gb|ACL74099.1| Shikimate kinase [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 190
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GK+T+G L+ AL F DSDK +EK G + IF+ GE FR ES
Sbjct: 7 IILIGPMGAGKSTIGRQLAAALHLPFRDSDKEIEKRTG-VDIPTIFEFEGEEGFRNRESA 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIA 205
L++L V+ATGGGAV+RP N +R G+ V+L + RR A
Sbjct: 66 MLEELCTEQGIVLATGGGAVMRPQNRALLRDCGLVVYLKTSVKTQLRRTA 115
>gi|220921140|ref|YP_002496441.1| shikimate kinase [Methylobacterium nodulans ORS 2060]
gi|219945746|gb|ACL56138.1| shikimate kinase [Methylobacterium nodulans ORS 2060]
Length = 200
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 10/185 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
V L + + LVG+MG+GK+TVG L+ L F D+D +E G ++A IF GE
Sbjct: 15 VRRGLGQRSIVLVGLMGAGKSTVGRRLAGRLGMIFMDADHEIEA-AAGLTIADIFAIYGE 73
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRP-LNWRFMRQGITVFLNVPLDALARRIAA 206
FR+ E + + +L V+ATGGGA +RP R +G++V+L LD L RR+
Sbjct: 74 TSFRDGEERVIARLLRDGPMVLATGGGAFMRPETRRRIAERGVSVWLKAELDVLMRRVRK 133
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDIT 266
PLL + + + + R Y +AD V +++ ++DVL+
Sbjct: 134 --RPGRPLLQNEDPEGTMRRLMDV------RHPVYGSADLMVLSRDVSHDRVVQDVLEAL 185
Query: 267 PTTIA 271
T A
Sbjct: 186 DTHFA 190
>gi|424916562|ref|ZP_18339926.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM597]
gi|392852738|gb|EJB05259.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM597]
Length = 196
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 81 LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQ 140
LK + R + L + L LVG+MG+GK+ VG I++ L F DSD +E++ ++ +
Sbjct: 12 LKDRAR---AALGSRNLILVGLMGAGKSAVGRIVASQLGIPFIDSDHEIERV-SRMTIPE 67
Query: 141 IFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWR-FMRQGITVFLNVPLDA 199
+F GE FR E++ +++L +VV+TGGGA + R ++ G++V+L LD
Sbjct: 68 LFAAYGEDEFRALETRVMKRLLKGGPRVVSTGGGAFINERTRRHIIKGGVSVWLKADLDV 127
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
L R+ D+ PLL ++ L L R YA AD TV
Sbjct: 128 LWERVNK--RDNRPLLKTENPKQ------TLEGLMNARYPIYAQADLTV 168
>gi|329296518|ref|ZP_08253854.1| Shikimate kinase [Plautia stali symbiont]
Length = 174
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++L+G G GKTT+G+ LS AL Y F D+D ++ +L SVA+I G FR ES+
Sbjct: 5 IYLIGARGCGKTTIGQALSQALGYAFRDTDHHL-QLTTQRSVAEIVATEGWDSFRARESE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
+L+ ++ P V+ATGGG V+ +N FMR+ G ++LN P LA R+
Sbjct: 64 SLRAVT-APATVIATGGGMVLVDVNRHFMREHGQVIWLNAPSGVLADRL 111
>gi|340757402|ref|ZP_08694003.1| shikimate kinase [Fusobacterium varium ATCC 27725]
gi|251834664|gb|EES63227.1| shikimate kinase [Fusobacterium varium ATCC 27725]
Length = 172
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 11/154 (7%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+G MGSGK+T+G +L+ LD F D DK + T + +IF+E GEAYFR+ E + +
Sbjct: 7 LIGFMGSGKSTIGRVLAKYLDMKFIDIDKMISAREKKT-IPEIFEEKGEAYFRKLEREIV 65
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLLDY 217
+ SL V+ATGGG ++ N + +R+ V+L+ ++ + R+ + PLL+
Sbjct: 66 YEESLDNNIVIATGGGVIIDNENIKTLRETSFIVYLDCTIECIYERVKH--SKGRPLLNV 123
Query: 218 DSADSYTKAFTALSALSKERSEAY-ANADATVSL 250
D F + L +R Y +AD +V +
Sbjct: 124 DD------MFEKIKELHSKREILYRISADFSVKI 151
>gi|158426112|ref|YP_001527404.1| shikimate kinase [Azorhizobium caulinodans ORS 571]
gi|158333001|dbj|BAF90486.1| shikimate kinase [Azorhizobium caulinodans ORS 571]
Length = 212
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L +C+ LVGM G+GK+TVG L+ L F D+D+ +E+ G S+ +IF GE+ FR
Sbjct: 31 LGTRCIVLVGMPGAGKSTVGRRLAKRLGLPFLDADEEIER-AAGMSIPEIFSSRGESEFR 89
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRP-LNWRFMRQGITVFLNVPLDALARRIAAVGTD 210
E E + + +L V+ATGGGA + RQ ++V+L + L RR+
Sbjct: 90 EGERRVIARLLQTGPCVLATGGGAFMNAETRAAVARQAVSVWLRAEIPVLLRRVRK--RA 147
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
PLL D K L AL R + YA AD TV
Sbjct: 148 DRPLL--AEGDPVAK----LEALLAARGDTYALADVTV 179
>gi|47567793|ref|ZP_00238501.1| shikimate kinase [Bacillus cereus G9241]
gi|47555470|gb|EAL13813.1| shikimate kinase [Bacillus cereus G9241]
Length = 165
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 5/143 (3%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ G ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELHMDVVDTDQKIEEKQ-GKAIRDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLRSLP-VRNAIITTGGGIIEREENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKE 236
L D++ F + A +E
Sbjct: 118 LFQKKDIDAFVTKFESRRAYYEE 140
>gi|110680277|ref|YP_683284.1| shikimate kinase [Roseobacter denitrificans OCh 114]
gi|109456393|gb|ABG32598.1| shikimate kinase, putative [Roseobacter denitrificans OCh 114]
Length = 197
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 10/155 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + ++GMMG+GKT VG L+ LD F DSD +E +V +IF GEA+FR E
Sbjct: 21 KTVVMIGMMGAGKTAVGRALAQLLDVPFLDSDHEIEA-AANMTVPEIFARDGEAFFRARE 79
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
S+ + +L V++TGGGA + N + +G++V+L+ +D L R+ D+ P
Sbjct: 80 SEVINRLLGGQACVLSTGGGAFLAEANRAAISARGVSVWLDADIDLLWSRVK--HRDTRP 137
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL +AD L+AL + R YA AD TV
Sbjct: 138 LL--RTADPKAT----LTALFETRVPEYAKADITV 166
>gi|15800114|ref|NP_286126.1| shikimate kinase [Escherichia coli O157:H7 str. EDL933]
gi|15829692|ref|NP_308465.1| shikimate kinase [Escherichia coli O157:H7 str. Sakai]
gi|16128373|ref|NP_414922.1| shikimate kinase II [Escherichia coli str. K-12 substr. MG1655]
gi|26246390|ref|NP_752429.1| shikimate kinase II [Escherichia coli CFT073]
gi|74310956|ref|YP_309375.1| shikimate kinase [Shigella sonnei Ss046]
gi|82542879|ref|YP_406826.1| shikimate kinase [Shigella boydii Sb227]
gi|110640649|ref|YP_668377.1| shikimate kinase [Escherichia coli 536]
gi|110804411|ref|YP_687931.1| shikimate kinase II [Shigella flexneri 5 str. 8401]
gi|157158472|ref|YP_001461566.1| shikimate kinase [Escherichia coli E24377A]
gi|157159907|ref|YP_001457225.1| shikimate kinase II [Escherichia coli HS]
gi|168749838|ref|ZP_02774860.1| shikimate kinase [Escherichia coli O157:H7 str. EC4113]
gi|168756917|ref|ZP_02781924.1| shikimate kinase [Escherichia coli O157:H7 str. EC4401]
gi|168761581|ref|ZP_02786588.1| shikimate kinase [Escherichia coli O157:H7 str. EC4501]
gi|168768326|ref|ZP_02793333.1| shikimate kinase [Escherichia coli O157:H7 str. EC4486]
gi|168776319|ref|ZP_02801326.1| shikimate kinase [Escherichia coli O157:H7 str. EC4196]
gi|168783241|ref|ZP_02808248.1| shikimate kinase [Escherichia coli O157:H7 str. EC4076]
gi|168786222|ref|ZP_02811229.1| shikimate kinase [Escherichia coli O157:H7 str. EC869]
gi|168800258|ref|ZP_02825265.1| shikimate kinase [Escherichia coli O157:H7 str. EC508]
gi|170021239|ref|YP_001726193.1| shikimate kinase [Escherichia coli ATCC 8739]
gi|170079975|ref|YP_001729295.1| shikimate kinase [Escherichia coli str. K-12 substr. DH10B]
gi|170683799|ref|YP_001742521.1| shikimate kinase II [Escherichia coli SMS-3-5]
gi|188492285|ref|ZP_02999555.1| shikimate kinase [Escherichia coli 53638]
gi|191166704|ref|ZP_03028531.1| shikimate kinase [Escherichia coli B7A]
gi|191173510|ref|ZP_03035037.1| shikimate kinase [Escherichia coli F11]
gi|193065178|ref|ZP_03046251.1| shikimate kinase [Escherichia coli E22]
gi|193068594|ref|ZP_03049555.1| shikimate kinase [Escherichia coli E110019]
gi|194428851|ref|ZP_03061386.1| shikimate kinase [Escherichia coli B171]
gi|194432564|ref|ZP_03064850.1| shikimate kinase [Shigella dysenteriae 1012]
gi|194438875|ref|ZP_03070960.1| shikimate kinase [Escherichia coli 101-1]
gi|195938552|ref|ZP_03083934.1| shikimate kinase II [Escherichia coli O157:H7 str. EC4024]
gi|208805709|ref|ZP_03248046.1| shikimate kinase [Escherichia coli O157:H7 str. EC4206]
gi|208815509|ref|ZP_03256688.1| shikimate kinase [Escherichia coli O157:H7 str. EC4045]
gi|208823243|ref|ZP_03263561.1| shikimate kinase [Escherichia coli O157:H7 str. EC4042]
gi|209400496|ref|YP_002269026.1| shikimate kinase [Escherichia coli O157:H7 str. EC4115]
gi|209917600|ref|YP_002291684.1| shikimate kinase II [Escherichia coli SE11]
gi|215485470|ref|YP_002327901.1| shikimate kinase [Escherichia coli O127:H6 str. E2348/69]
gi|217324657|ref|ZP_03440741.1| shikimate kinase [Escherichia coli O157:H7 str. TW14588]
gi|218552951|ref|YP_002385864.1| shikimate kinase II [Escherichia coli IAI1]
gi|218693849|ref|YP_002401516.1| shikimate kinase [Escherichia coli 55989]
gi|218703670|ref|YP_002411189.1| shikimate kinase II [Escherichia coli UMN026]
gi|222155179|ref|YP_002555318.1| Shikimate kinase 2 [Escherichia coli LF82]
gi|227884608|ref|ZP_04002413.1| shikimate kinase II [Escherichia coli 83972]
gi|238899678|ref|YP_002925474.1| shikimate kinase [Escherichia coli BW2952]
gi|251783892|ref|YP_002998196.1| shikimate kinase II [Escherichia coli BL21(DE3)]
gi|253774630|ref|YP_003037461.1| shikimate kinase II [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254160454|ref|YP_003043562.1| shikimate kinase II [Escherichia coli B str. REL606]
gi|254287257|ref|YP_003053005.1| shikimate kinase [Escherichia coli BL21(DE3)]
gi|254791566|ref|YP_003076403.1| shikimate kinase II [Escherichia coli O157:H7 str. TW14359]
gi|260842588|ref|YP_003220366.1| shikimate kinase II [Escherichia coli O103:H2 str. 12009]
gi|260853610|ref|YP_003227501.1| shikimate kinase [Escherichia coli O26:H11 str. 11368]
gi|260866549|ref|YP_003232951.1| shikimate kinase [Escherichia coli O111:H- str. 11128]
gi|261223864|ref|ZP_05938145.1| shikimate kinase II [Escherichia coli O157:H7 str. FRIK2000]
gi|261256072|ref|ZP_05948605.1| shikimate kinase II [Escherichia coli O157:H7 str. FRIK966]
gi|291281291|ref|YP_003498109.1| shikimate kinase 2 [Escherichia coli O55:H7 str. CB9615]
gi|293403506|ref|ZP_06647597.1| shikimate kinase 2 [Escherichia coli FVEC1412]
gi|293418455|ref|ZP_06660890.1| shikimate kinase [Escherichia coli B088]
gi|297517443|ref|ZP_06935829.1| shikimate kinase II [Escherichia coli OP50]
gi|298379117|ref|ZP_06988998.1| aroL [Escherichia coli FVEC1302]
gi|300818291|ref|ZP_07098502.1| shikimate kinase [Escherichia coli MS 107-1]
gi|300820376|ref|ZP_07100528.1| shikimate kinase [Escherichia coli MS 119-7]
gi|300900446|ref|ZP_07118615.1| shikimate kinase [Escherichia coli MS 198-1]
gi|300918236|ref|ZP_07134841.1| shikimate kinase [Escherichia coli MS 115-1]
gi|300924104|ref|ZP_07140097.1| shikimate kinase [Escherichia coli MS 182-1]
gi|300930321|ref|ZP_07145733.1| shikimate kinase [Escherichia coli MS 187-1]
gi|300947967|ref|ZP_07162112.1| shikimate kinase [Escherichia coli MS 116-1]
gi|300957944|ref|ZP_07170112.1| shikimate kinase [Escherichia coli MS 175-1]
gi|300988114|ref|ZP_07178551.1| shikimate kinase [Escherichia coli MS 45-1]
gi|300997428|ref|ZP_07181768.1| shikimate kinase [Escherichia coli MS 200-1]
gi|301025465|ref|ZP_07189012.1| shikimate kinase [Escherichia coli MS 69-1]
gi|301049583|ref|ZP_07196535.1| shikimate kinase [Escherichia coli MS 185-1]
gi|301330758|ref|ZP_07223358.1| shikimate kinase [Escherichia coli MS 78-1]
gi|301647305|ref|ZP_07247119.1| shikimate kinase [Escherichia coli MS 146-1]
gi|306813146|ref|ZP_07447339.1| shikimate kinase II [Escherichia coli NC101]
gi|307312235|ref|ZP_07591871.1| Shikimate kinase [Escherichia coli W]
gi|309794890|ref|ZP_07689311.1| shikimate kinase [Escherichia coli MS 145-7]
gi|331640903|ref|ZP_08342038.1| shikimate kinase [Escherichia coli H736]
gi|331645559|ref|ZP_08346663.1| shikimate kinase [Escherichia coli M605]
gi|331651316|ref|ZP_08352341.1| shikimate kinase [Escherichia coli M718]
gi|331656440|ref|ZP_08357402.1| shikimate kinase [Escherichia coli TA206]
gi|331661761|ref|ZP_08362684.1| shikimate kinase [Escherichia coli TA143]
gi|331666735|ref|ZP_08367609.1| shikimate kinase [Escherichia coli TA271]
gi|331671938|ref|ZP_08372734.1| shikimate kinase [Escherichia coli TA280]
gi|331676054|ref|ZP_08376766.1| shikimate kinase [Escherichia coli H591]
gi|331681780|ref|ZP_08382413.1| shikimate kinase [Escherichia coli H299]
gi|332281532|ref|ZP_08393945.1| shikimate kinase II [Shigella sp. D9]
gi|378714207|ref|YP_005279100.1| shikimate kinase [Escherichia coli KO11FL]
gi|383176966|ref|YP_005454971.1| shikimate kinase [Shigella sonnei 53G]
gi|386596735|ref|YP_006093135.1| shikimate kinase [Escherichia coli DH1]
gi|386607750|ref|YP_006123236.1| shikimate kinase [Escherichia coli W]
gi|386627973|ref|YP_006147693.1| shikimate kinase [Escherichia coli str. 'clone D i2']
gi|386632893|ref|YP_006152612.1| shikimate kinase [Escherichia coli str. 'clone D i14']
gi|386637801|ref|YP_006104599.1| shikimate kinase [Escherichia coli ABU 83972]
gi|386702808|ref|YP_006166645.1| shikimate kinase [Escherichia coli KO11FL]
gi|386708188|ref|YP_006171909.1| shikimate kinase [Escherichia coli W]
gi|387505398|ref|YP_006157654.1| shikimate kinase [Escherichia coli O55:H7 str. RM12579]
gi|387605895|ref|YP_006094751.1| shikimate kinase [Escherichia coli 042]
gi|387610914|ref|YP_006114030.1| shikimate kinase [Escherichia coli ETEC H10407]
gi|387615704|ref|YP_006118726.1| shikimate kinase [Escherichia coli O83:H1 str. NRG 857C]
gi|387620148|ref|YP_006127775.1| shikimate kinase [Escherichia coli DH1]
gi|387828402|ref|YP_003348339.1| shikimate kinase [Escherichia coli SE15]
gi|387880980|ref|YP_006311282.1| shikimate kinase [Escherichia coli Xuzhou21]
gi|388476495|ref|YP_488681.1| shikimate kinase II [Escherichia coli str. K-12 substr. W3110]
gi|404373712|ref|ZP_10978947.1| shikimate kinase 2 [Escherichia sp. 1_1_43]
gi|407467835|ref|YP_006785723.1| shikimate kinase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407483434|ref|YP_006780583.1| shikimate kinase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410483988|ref|YP_006771534.1| shikimate kinase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|415873778|ref|ZP_11540951.1| shikimate kinase [Escherichia coli MS 79-10]
gi|416312935|ref|ZP_11657870.1| Shikimate kinase III [Escherichia coli O157:H7 str. 1044]
gi|416780450|ref|ZP_11876836.1| shikimate kinase II [Escherichia coli O157:H7 str. G5101]
gi|416791601|ref|ZP_11881734.1| shikimate kinase II [Escherichia coli O157:H- str. 493-89]
gi|416803244|ref|ZP_11886595.1| shikimate kinase II [Escherichia coli O157:H- str. H 2687]
gi|416811815|ref|ZP_11890088.1| shikimate kinase II [Escherichia coli O55:H7 str. 3256-97]
gi|416834951|ref|ZP_11901199.1| shikimate kinase II [Escherichia coli O157:H7 str. LSU-61]
gi|417114509|ref|ZP_11965780.1| shikimate kinase II [Escherichia coli 1.2741]
gi|417121095|ref|ZP_11970549.1| shikimate kinase II [Escherichia coli 97.0246]
gi|417132806|ref|ZP_11977591.1| shikimate kinase II [Escherichia coli 5.0588]
gi|417139628|ref|ZP_11983050.1| shikimate kinase II [Escherichia coli 97.0259]
gi|417144707|ref|ZP_11986513.1| shikimate kinase II [Escherichia coli 1.2264]
gi|417152772|ref|ZP_11991563.1| shikimate kinase II [Escherichia coli 96.0497]
gi|417175079|ref|ZP_12004875.1| shikimate kinase II [Escherichia coli 3.2608]
gi|417179199|ref|ZP_12007299.1| shikimate kinase II [Escherichia coli 93.0624]
gi|417190706|ref|ZP_12013302.1| shikimate kinase II [Escherichia coli 4.0522]
gi|417218278|ref|ZP_12023880.1| shikimate kinase II [Escherichia coli JB1-95]
gi|417223735|ref|ZP_12027026.1| shikimate kinase II [Escherichia coli 96.154]
gi|417229408|ref|ZP_12030994.1| shikimate kinase II [Escherichia coli 5.0959]
gi|417247115|ref|ZP_12040216.1| shikimate kinase II [Escherichia coli 9.0111]
gi|417253201|ref|ZP_12044960.1| shikimate kinase II [Escherichia coli 4.0967]
gi|417260782|ref|ZP_12048280.1| shikimate kinase II [Escherichia coli 2.3916]
gi|417267976|ref|ZP_12055337.1| shikimate kinase II [Escherichia coli 3.3884]
gi|417270557|ref|ZP_12057910.1| shikimate kinase II [Escherichia coli 2.4168]
gi|417288396|ref|ZP_12075681.1| shikimate kinase II [Escherichia coli TW07793]
gi|417292908|ref|ZP_12080188.1| shikimate kinase II [Escherichia coli B41]
gi|417299548|ref|ZP_12086778.1| shikimate kinase II [Escherichia coli 900105 (10e)]
gi|417803737|ref|ZP_12450772.1| shikimate kinase II [Escherichia coli O104:H4 str. LB226692]
gi|417831489|ref|ZP_12478011.1| shikimate kinase II [Escherichia coli O104:H4 str. 01-09591]
gi|417867687|ref|ZP_12512722.1| hypothetical protein C22711_4613 [Escherichia coli O104:H4 str.
C227-11]
gi|417945795|ref|ZP_12589024.1| shikimate kinase II [Escherichia coli XH140A]
gi|417976641|ref|ZP_12617433.1| shikimate kinase II [Escherichia coli XH001]
gi|418942227|ref|ZP_13495516.1| shikimate kinase II [Escherichia coli O157:H43 str. T22]
gi|419118818|ref|ZP_13663803.1| shikimate kinase 2 [Escherichia coli DEC5B]
gi|419213822|ref|ZP_13756854.1| shikimate kinase 2 [Escherichia coli DEC8D]
gi|419259017|ref|ZP_13801477.1| shikimate kinase 2 [Escherichia coli DEC10B]
gi|419699302|ref|ZP_14226918.1| shikimate kinase II [Escherichia coli SCI-07]
gi|419811871|ref|ZP_14336743.1| shikimate kinase II [Escherichia coli O32:H37 str. P4]
gi|419862410|ref|ZP_14385015.1| shikimate kinase II [Escherichia coli O103:H25 str. CVM9340]
gi|419867954|ref|ZP_14390268.1| shikimate kinase II [Escherichia coli O103:H2 str. CVM9450]
gi|419876915|ref|ZP_14398574.1| shikimate kinase II [Escherichia coli O111:H11 str. CVM9534]
gi|419885767|ref|ZP_14406433.1| shikimate kinase II [Escherichia coli O111:H11 str. CVM9545]
gi|419890287|ref|ZP_14410572.1| shikimate kinase II [Escherichia coli O111:H8 str. CVM9570]
gi|419893091|ref|ZP_14413097.1| shikimate kinase II [Escherichia coli O111:H8 str. CVM9574]
gi|419900647|ref|ZP_14420073.1| shikimate kinase II [Escherichia coli O26:H11 str. CVM9942]
gi|419908340|ref|ZP_14427074.1| shikimate kinase [Escherichia coli O26:H11 str. CVM10026]
gi|419916901|ref|ZP_14435184.1| shikimate kinase II [Escherichia coli KD2]
gi|419923241|ref|ZP_14441203.1| shikimate kinase II [Escherichia coli 541-15]
gi|419928001|ref|ZP_14445721.1| shikimate kinase II [Escherichia coli 541-1]
gi|419941444|ref|ZP_14458131.1| shikimate kinase II [Escherichia coli 75]
gi|419948977|ref|ZP_14465240.1| shikimate kinase II [Escherichia coli CUMT8]
gi|420088202|ref|ZP_14600106.1| shikimate kinase II [Escherichia coli O111:H8 str. CVM9602]
gi|420092988|ref|ZP_14604678.1| shikimate kinase II [Escherichia coli O111:H8 str. CVM9634]
gi|420103117|ref|ZP_14614031.1| shikimate kinase II [Escherichia coli O111:H11 str. CVM9455]
gi|420109746|ref|ZP_14619846.1| shikimate kinase II [Escherichia coli O111:H11 str. CVM9553]
gi|420113428|ref|ZP_14623171.1| shikimate kinase II [Escherichia coli O26:H11 str. CVM10021]
gi|420119586|ref|ZP_14628851.1| shikimate kinase II [Escherichia coli O26:H11 str. CVM10030]
gi|420125662|ref|ZP_14634453.1| shikimate kinase [Escherichia coli O26:H11 str. CVM10224]
gi|420130774|ref|ZP_14639254.1| shikimate kinase II [Escherichia coli O26:H11 str. CVM9952]
gi|420267892|ref|ZP_14770299.1| shikimate kinase 2 [Escherichia coli PA22]
gi|420285013|ref|ZP_14787231.1| shikimate kinase 2 [Escherichia coli TW10246]
gi|420313496|ref|ZP_14815404.1| shikimate kinase 2 [Escherichia coli EC1734]
gi|422330640|ref|ZP_16411657.1| shikimate kinase 2 [Escherichia coli 4_1_47FAA]
gi|422355387|ref|ZP_16436103.1| shikimate kinase [Escherichia coli MS 117-3]
gi|422363083|ref|ZP_16443631.1| shikimate kinase [Escherichia coli MS 153-1]
gi|422368648|ref|ZP_16449053.1| shikimate kinase [Escherichia coli MS 16-3]
gi|422378016|ref|ZP_16458239.1| shikimate kinase [Escherichia coli MS 60-1]
gi|422378621|ref|ZP_16458828.1| shikimate kinase [Escherichia coli MS 57-2]
gi|422763179|ref|ZP_16816934.1| shikimate kinase [Escherichia coli E1167]
gi|422764918|ref|ZP_16818645.1| shikimate kinase [Escherichia coli E1520]
gi|422769616|ref|ZP_16823307.1| shikimate kinase [Escherichia coli E482]
gi|422777080|ref|ZP_16830733.1| shikimate kinase [Escherichia coli H120]
gi|422782824|ref|ZP_16835609.1| shikimate kinase [Escherichia coli TW10509]
gi|422784994|ref|ZP_16837733.1| shikimate kinase [Escherichia coli H489]
gi|422791191|ref|ZP_16843894.1| shikimate kinase [Escherichia coli TA007]
gi|422802257|ref|ZP_16850751.1| shikimate kinase [Escherichia coli M863]
gi|422816404|ref|ZP_16864619.1| shikimate kinase 2 [Escherichia coli M919]
gi|422835198|ref|ZP_16883255.1| shikimate kinase [Escherichia coli E101]
gi|422960273|ref|ZP_16971721.1| shikimate kinase 2 [Escherichia coli H494]
gi|422974707|ref|ZP_16976408.1| shikimate kinase 2 [Escherichia coli TA124]
gi|422991101|ref|ZP_16981872.1| shikimate kinase 2 [Escherichia coli O104:H4 str. C227-11]
gi|422993040|ref|ZP_16983804.1| shikimate kinase 2 [Escherichia coli O104:H4 str. C236-11]
gi|422998251|ref|ZP_16989007.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 09-7901]
gi|423006712|ref|ZP_16997455.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 04-8351]
gi|423008355|ref|ZP_16999093.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-3677]
gi|423022542|ref|ZP_17013245.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-4404]
gi|423027696|ref|ZP_17018389.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-4522]
gi|423033533|ref|ZP_17024217.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-4623]
gi|423036399|ref|ZP_17027073.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423041519|ref|ZP_17032186.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423048205|ref|ZP_17038862.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423051789|ref|ZP_17040597.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423058754|ref|ZP_17047550.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-4632 C5]
gi|423701171|ref|ZP_17675630.1| shikimate kinase 2 [Escherichia coli H730]
gi|423710157|ref|ZP_17684507.1| shikimate kinase 2 [Escherichia coli B799]
gi|424491017|ref|ZP_17939437.1| shikimate kinase 2 [Escherichia coli TW09195]
gi|424554674|ref|ZP_17996413.1| shikimate kinase 2 [Escherichia coli EC4436]
gi|424747983|ref|ZP_18176135.1| shikimate kinase [Escherichia coli O26:H11 str. CFSAN001629]
gi|424766739|ref|ZP_18194084.1| shikimate kinase [Escherichia coli O111:H11 str. CFSAN001630]
gi|424768101|ref|ZP_18195393.1| shikimate kinase [Escherichia coli O111:H8 str. CFSAN001632]
gi|424836878|ref|ZP_18261515.1| shikimate kinase II [Shigella flexneri 5a str. M90T]
gi|425327403|ref|ZP_18715640.1| shikimate kinase 2 [Escherichia coli EC1846]
gi|425402243|ref|ZP_18784859.1| shikimate kinase 2 [Escherichia coli EC1870]
gi|427803454|ref|ZP_18970521.1| shikimate kinase II [Escherichia coli chi7122]
gi|427808072|ref|ZP_18975137.1| shikimate kinase II [Escherichia coli]
gi|429722581|ref|ZP_19257479.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-9450]
gi|429774678|ref|ZP_19306681.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-02030]
gi|429779941|ref|ZP_19311894.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-02033-1]
gi|429783993|ref|ZP_19315906.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-02092]
gi|429789331|ref|ZP_19321206.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-02093]
gi|429795561|ref|ZP_19327387.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-02281]
gi|429801487|ref|ZP_19333265.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-02318]
gi|429805119|ref|ZP_19336866.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-02913]
gi|429809930|ref|ZP_19341632.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-03439]
gi|429815690|ref|ZP_19347349.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-04080]
gi|429821278|ref|ZP_19352891.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-03943]
gi|429906952|ref|ZP_19372921.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-9990]
gi|429911150|ref|ZP_19377106.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-9941]
gi|429916986|ref|ZP_19382926.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-4984]
gi|429922024|ref|ZP_19387945.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-5604]
gi|429927842|ref|ZP_19393748.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-4986]
gi|429931774|ref|ZP_19397669.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-4987]
gi|429933376|ref|ZP_19399266.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-4988]
gi|429939030|ref|ZP_19404904.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-5603]
gi|429946673|ref|ZP_19412528.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-6006]
gi|429949305|ref|ZP_19415153.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec12-0465]
gi|429957589|ref|ZP_19423418.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec12-0466]
gi|432352050|ref|ZP_19595359.1| shikimate kinase 2 [Escherichia coli KTE2]
gi|432368369|ref|ZP_19611474.1| shikimate kinase 2 [Escherichia coli KTE10]
gi|432375469|ref|ZP_19618483.1| shikimate kinase 2 [Escherichia coli KTE12]
gi|432380017|ref|ZP_19622981.1| shikimate kinase 2 [Escherichia coli KTE15]
gi|432385847|ref|ZP_19628746.1| shikimate kinase 2 [Escherichia coli KTE16]
gi|432390308|ref|ZP_19633173.1| shikimate kinase 2 [Escherichia coli KTE21]
gi|432396263|ref|ZP_19639055.1| shikimate kinase 2 [Escherichia coli KTE25]
gi|432400498|ref|ZP_19643258.1| shikimate kinase 2 [Escherichia coli KTE26]
gi|432405259|ref|ZP_19647982.1| shikimate kinase 2 [Escherichia coli KTE28]
gi|432410458|ref|ZP_19653141.1| shikimate kinase 2 [Escherichia coli KTE39]
gi|432415342|ref|ZP_19657973.1| shikimate kinase 2 [Escherichia coli KTE44]
gi|432420499|ref|ZP_19663057.1| shikimate kinase 2 [Escherichia coli KTE178]
gi|432429536|ref|ZP_19671996.1| shikimate kinase 2 [Escherichia coli KTE181]
gi|432430505|ref|ZP_19672950.1| shikimate kinase 2 [Escherichia coli KTE187]
gi|432435034|ref|ZP_19677435.1| shikimate kinase 2 [Escherichia coli KTE188]
gi|432453288|ref|ZP_19695528.1| shikimate kinase 2 [Escherichia coli KTE193]
gi|432455317|ref|ZP_19697519.1| shikimate kinase 2 [Escherichia coli KTE201]
gi|432459358|ref|ZP_19701522.1| shikimate kinase 2 [Escherichia coli KTE204]
gi|432469822|ref|ZP_19711875.1| shikimate kinase 2 [Escherichia coli KTE206]
gi|432474406|ref|ZP_19716419.1| shikimate kinase 2 [Escherichia coli KTE208]
gi|432479750|ref|ZP_19721715.1| shikimate kinase 2 [Escherichia coli KTE210]
gi|432484117|ref|ZP_19726041.1| shikimate kinase 2 [Escherichia coli KTE212]
gi|432492683|ref|ZP_19734522.1| shikimate kinase 2 [Escherichia coli KTE213]
gi|432494258|ref|ZP_19736076.1| shikimate kinase 2 [Escherichia coli KTE214]
gi|432498633|ref|ZP_19740413.1| shikimate kinase 2 [Escherichia coli KTE216]
gi|432503097|ref|ZP_19744834.1| shikimate kinase 2 [Escherichia coli KTE220]
gi|432512597|ref|ZP_19749840.1| shikimate kinase 2 [Escherichia coli KTE224]
gi|432521024|ref|ZP_19758189.1| shikimate kinase 2 [Escherichia coli KTE228]
gi|432522542|ref|ZP_19759681.1| shikimate kinase 2 [Escherichia coli KTE230]
gi|432529758|ref|ZP_19766802.1| shikimate kinase 2 [Escherichia coli KTE233]
gi|432532578|ref|ZP_19769578.1| shikimate kinase 2 [Escherichia coli KTE234]
gi|432541241|ref|ZP_19778116.1| shikimate kinase 2 [Escherichia coli KTE235]
gi|432541760|ref|ZP_19778621.1| shikimate kinase 2 [Escherichia coli KTE236]
gi|432547100|ref|ZP_19783898.1| shikimate kinase 2 [Escherichia coli KTE237]
gi|432552397|ref|ZP_19789129.1| shikimate kinase 2 [Escherichia coli KTE47]
gi|432557406|ref|ZP_19794099.1| shikimate kinase 2 [Escherichia coli KTE49]
gi|432562300|ref|ZP_19798927.1| shikimate kinase 2 [Escherichia coli KTE51]
gi|432567228|ref|ZP_19803755.1| shikimate kinase 2 [Escherichia coli KTE53]
gi|432579067|ref|ZP_19815501.1| shikimate kinase 2 [Escherichia coli KTE56]
gi|432591508|ref|ZP_19827837.1| shikimate kinase 2 [Escherichia coli KTE60]
gi|432600902|ref|ZP_19837157.1| shikimate kinase 2 [Escherichia coli KTE66]
gi|432606274|ref|ZP_19842470.1| shikimate kinase 2 [Escherichia coli KTE67]
gi|432610123|ref|ZP_19846296.1| shikimate kinase 2 [Escherichia coli KTE72]
gi|432615164|ref|ZP_19851299.1| shikimate kinase 2 [Escherichia coli KTE75]
gi|432620487|ref|ZP_19856533.1| shikimate kinase 2 [Escherichia coli KTE76]
gi|432625974|ref|ZP_19861959.1| shikimate kinase 2 [Escherichia coli KTE77]
gi|432629957|ref|ZP_19865907.1| shikimate kinase 2 [Escherichia coli KTE80]
gi|432635703|ref|ZP_19871589.1| shikimate kinase 2 [Escherichia coli KTE81]
gi|432639506|ref|ZP_19875351.1| shikimate kinase 2 [Escherichia coli KTE83]
gi|432644824|ref|ZP_19880627.1| shikimate kinase 2 [Escherichia coli KTE86]
gi|432649917|ref|ZP_19885679.1| shikimate kinase 2 [Escherichia coli KTE87]
gi|432654399|ref|ZP_19890118.1| shikimate kinase 2 [Escherichia coli KTE93]
gi|432659631|ref|ZP_19895292.1| shikimate kinase 2 [Escherichia coli KTE111]
gi|432664575|ref|ZP_19900171.1| shikimate kinase 2 [Escherichia coli KTE116]
gi|432669322|ref|ZP_19904871.1| shikimate kinase 2 [Escherichia coli KTE119]
gi|432677978|ref|ZP_19913405.1| shikimate kinase 2 [Escherichia coli KTE142]
gi|432684223|ref|ZP_19919542.1| shikimate kinase 2 [Escherichia coli KTE156]
gi|432693173|ref|ZP_19928388.1| shikimate kinase 2 [Escherichia coli KTE162]
gi|432697706|ref|ZP_19932878.1| shikimate kinase 2 [Escherichia coli KTE169]
gi|432702961|ref|ZP_19938087.1| shikimate kinase 2 [Escherichia coli KTE171]
gi|432709220|ref|ZP_19944289.1| shikimate kinase 2 [Escherichia coli KTE6]
gi|432712110|ref|ZP_19947162.1| shikimate kinase 2 [Escherichia coli KTE8]
gi|432717395|ref|ZP_19952397.1| shikimate kinase 2 [Escherichia coli KTE9]
gi|432721952|ref|ZP_19956879.1| shikimate kinase 2 [Escherichia coli KTE17]
gi|432726498|ref|ZP_19961381.1| shikimate kinase 2 [Escherichia coli KTE18]
gi|432731111|ref|ZP_19965950.1| shikimate kinase 2 [Escherichia coli KTE45]
gi|432735915|ref|ZP_19970691.1| shikimate kinase 2 [Escherichia coli KTE42]
gi|432740185|ref|ZP_19974907.1| shikimate kinase 2 [Escherichia coli KTE23]
gi|432744326|ref|ZP_19979031.1| shikimate kinase 2 [Escherichia coli KTE43]
gi|432748843|ref|ZP_19983466.1| shikimate kinase 2 [Escherichia coli KTE29]
gi|432758171|ref|ZP_19992694.1| shikimate kinase 2 [Escherichia coli KTE46]
gi|432763677|ref|ZP_19998129.1| shikimate kinase 2 [Escherichia coli KTE48]
gi|432769189|ref|ZP_20003562.1| shikimate kinase 2 [Escherichia coli KTE50]
gi|432773567|ref|ZP_20007857.1| shikimate kinase 2 [Escherichia coli KTE54]
gi|432782297|ref|ZP_20016483.1| shikimate kinase 2 [Escherichia coli KTE63]
gi|432791633|ref|ZP_20025727.1| shikimate kinase 2 [Escherichia coli KTE78]
gi|432797600|ref|ZP_20031628.1| shikimate kinase 2 [Escherichia coli KTE79]
gi|432800670|ref|ZP_20034660.1| shikimate kinase 2 [Escherichia coli KTE84]
gi|432804468|ref|ZP_20038414.1| shikimate kinase 2 [Escherichia coli KTE91]
gi|432812498|ref|ZP_20046347.1| shikimate kinase 2 [Escherichia coli KTE101]
gi|432813880|ref|ZP_20047691.1| shikimate kinase 2 [Escherichia coli KTE115]
gi|432830374|ref|ZP_20063983.1| shikimate kinase 2 [Escherichia coli KTE135]
gi|432833442|ref|ZP_20066990.1| shikimate kinase 2 [Escherichia coli KTE136]
gi|432837936|ref|ZP_20071429.1| shikimate kinase 2 [Escherichia coli KTE140]
gi|432842676|ref|ZP_20076097.1| shikimate kinase 2 [Escherichia coli KTE141]
gi|432848161|ref|ZP_20080033.1| shikimate kinase 2 [Escherichia coli KTE144]
gi|432859040|ref|ZP_20085214.1| shikimate kinase 2 [Escherichia coli KTE146]
gi|432873048|ref|ZP_20092746.1| shikimate kinase 2 [Escherichia coli KTE147]
gi|432879882|ref|ZP_20096702.1| shikimate kinase 2 [Escherichia coli KTE154]
gi|432884353|ref|ZP_20099309.1| shikimate kinase 2 [Escherichia coli KTE158]
gi|432893005|ref|ZP_20105110.1| shikimate kinase 2 [Escherichia coli KTE165]
gi|432897174|ref|ZP_20108170.1| shikimate kinase 2 [Escherichia coli KTE192]
gi|432902722|ref|ZP_20112402.1| shikimate kinase 2 [Escherichia coli KTE194]
gi|432910073|ref|ZP_20117200.1| shikimate kinase 2 [Escherichia coli KTE190]
gi|432917518|ref|ZP_20122049.1| shikimate kinase 2 [Escherichia coli KTE173]
gi|432924823|ref|ZP_20126962.1| shikimate kinase 2 [Escherichia coli KTE175]
gi|432932724|ref|ZP_20132578.1| shikimate kinase 2 [Escherichia coli KTE184]
gi|432942262|ref|ZP_20139604.1| shikimate kinase 2 [Escherichia coli KTE183]
gi|432945053|ref|ZP_20141348.1| shikimate kinase 2 [Escherichia coli KTE196]
gi|432953522|ref|ZP_20145821.1| shikimate kinase 2 [Escherichia coli KTE197]
gi|432959772|ref|ZP_20150058.1| shikimate kinase 2 [Escherichia coli KTE202]
gi|432966497|ref|ZP_20155417.1| shikimate kinase 2 [Escherichia coli KTE203]
gi|432970566|ref|ZP_20159444.1| shikimate kinase 2 [Escherichia coli KTE207]
gi|432977111|ref|ZP_20165936.1| shikimate kinase 2 [Escherichia coli KTE209]
gi|432979893|ref|ZP_20168674.1| shikimate kinase 2 [Escherichia coli KTE211]
gi|432984081|ref|ZP_20172820.1| shikimate kinase 2 [Escherichia coli KTE215]
gi|432989494|ref|ZP_20178164.1| shikimate kinase 2 [Escherichia coli KTE217]
gi|432994184|ref|ZP_20182801.1| shikimate kinase 2 [Escherichia coli KTE218]
gi|432998603|ref|ZP_20187143.1| shikimate kinase 2 [Escherichia coli KTE223]
gi|433017343|ref|ZP_20205614.1| shikimate kinase 2 [Escherichia coli KTE105]
gi|433027429|ref|ZP_20215305.1| shikimate kinase 2 [Escherichia coli KTE109]
gi|433031820|ref|ZP_20219635.1| shikimate kinase 2 [Escherichia coli KTE112]
gi|433037325|ref|ZP_20224946.1| shikimate kinase 2 [Escherichia coli KTE113]
gi|433041867|ref|ZP_20229402.1| shikimate kinase 2 [Escherichia coli KTE117]
gi|433046461|ref|ZP_20233893.1| shikimate kinase 2 [Escherichia coli KTE120]
gi|433051686|ref|ZP_20238924.1| shikimate kinase 2 [Escherichia coli KTE122]
gi|433056727|ref|ZP_20243814.1| shikimate kinase 2 [Escherichia coli KTE124]
gi|433061605|ref|ZP_20248571.1| shikimate kinase 2 [Escherichia coli KTE125]
gi|433066595|ref|ZP_20253439.1| shikimate kinase 2 [Escherichia coli KTE128]
gi|433076587|ref|ZP_20263153.1| shikimate kinase 2 [Escherichia coli KTE131]
gi|433081336|ref|ZP_20267811.1| shikimate kinase 2 [Escherichia coli KTE133]
gi|433085993|ref|ZP_20272397.1| shikimate kinase 2 [Escherichia coli KTE137]
gi|433090710|ref|ZP_20277018.1| shikimate kinase 2 [Escherichia coli KTE138]
gi|433095256|ref|ZP_20281472.1| shikimate kinase 2 [Escherichia coli KTE139]
gi|433099937|ref|ZP_20286049.1| shikimate kinase 2 [Escherichia coli KTE145]
gi|433104524|ref|ZP_20290547.1| shikimate kinase 2 [Escherichia coli KTE148]
gi|433109641|ref|ZP_20295521.1| shikimate kinase 2 [Escherichia coli KTE150]
gi|433114340|ref|ZP_20300156.1| shikimate kinase 2 [Escherichia coli KTE153]
gi|433123957|ref|ZP_20309548.1| shikimate kinase 2 [Escherichia coli KTE160]
gi|433128717|ref|ZP_20314197.1| shikimate kinase 2 [Escherichia coli KTE163]
gi|433133537|ref|ZP_20318920.1| shikimate kinase 2 [Escherichia coli KTE166]
gi|433138018|ref|ZP_20323305.1| shikimate kinase 2 [Escherichia coli KTE167]
gi|433142951|ref|ZP_20328130.1| shikimate kinase 2 [Escherichia coli KTE168]
gi|433147846|ref|ZP_20332912.1| shikimate kinase 2 [Escherichia coli KTE174]
gi|433157330|ref|ZP_20342206.1| shikimate kinase 2 [Escherichia coli KTE177]
gi|433172259|ref|ZP_20356819.1| shikimate kinase 2 [Escherichia coli KTE232]
gi|433176833|ref|ZP_20361300.1| shikimate kinase 2 [Escherichia coli KTE82]
gi|433187194|ref|ZP_20371323.1| shikimate kinase 2 [Escherichia coli KTE88]
gi|433192317|ref|ZP_20376339.1| shikimate kinase 2 [Escherichia coli KTE90]
gi|433196976|ref|ZP_20380905.1| shikimate kinase 2 [Escherichia coli KTE94]
gi|433201808|ref|ZP_20385620.1| shikimate kinase 2 [Escherichia coli KTE95]
gi|433206539|ref|ZP_20390240.1| shikimate kinase 2 [Escherichia coli KTE97]
gi|433211319|ref|ZP_20394934.1| shikimate kinase 2 [Escherichia coli KTE99]
gi|443616412|ref|YP_007380268.1| shikimate kinase [Escherichia coli APEC O78]
gi|444994517|ref|ZP_21311114.1| shikimate kinase 2 [Escherichia coli PA13]
gi|450185597|ref|ZP_21889159.1| shikimate kinase [Escherichia coli SEPT362]
gi|450210905|ref|ZP_21894143.1| shikimate kinase [Escherichia coli O08]
gi|450239391|ref|ZP_21899028.1| shikimate kinase [Escherichia coli S17]
gi|452969044|ref|ZP_21967271.1| shikimate kinase [Escherichia coli O157:H7 str. EC4009]
gi|67462169|sp|P0A6E1.3|AROL_ECOLI RecName: Full=Shikimate kinase 2; Short=SK 2; AltName:
Full=Shikimate kinase II; Short=SKII
gi|67462170|sp|P0A6E2.3|AROL_ECOL6 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|67462171|sp|P0A6E3.3|AROL_ECO57 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|108935819|sp|Q325L0.3|AROL_SHIBS RecName: Full=Shikimate kinase 2; Short=SK 2
gi|108935821|sp|Q3Z522.3|AROL_SHISS RecName: Full=Shikimate kinase 2; Short=SK 2
gi|122957633|sp|Q0T7K0.1|AROL_SHIF8 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|123344318|sp|Q0TKQ3.1|AROL_ECOL5 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|166988285|sp|A7ZID7.1|AROL_ECO24 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|166988286|sp|A7ZX38.1|AROL_ECOHS RecName: Full=Shikimate kinase 2; Short=SK 2
gi|189046343|sp|B1J060.1|AROL_ECOLC RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729135|sp|B5Z2U0.1|AROL_ECO5E RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729137|sp|B7M333.1|AROL_ECO8A RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729138|sp|B1XEX7.1|AROL_ECODH RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729139|sp|B7N8U0.1|AROL_ECOLU RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729140|sp|B6HZI8.1|AROL_ECOSE RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729141|sp|B1LIS2.1|AROL_ECOSM RecName: Full=Shikimate kinase 2; Short=SK 2
gi|254806786|sp|B7UJL2.1|AROL_ECO27 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|254806787|sp|B7L543.1|AROL_ECO55 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|259585305|sp|C4ZTE7.1|AROL_ECOBW RecName: Full=Shikimate kinase 2; Short=SK 2
gi|12513228|gb|AAG54734.1|AE005217_12 shikimate kinase II [Escherichia coli O157:H7 str. EDL933]
gi|26106788|gb|AAN78973.1|AE016756_156 Shikimate kinase II [Escherichia coli CFT073]
gi|40984|emb|CAA27696.1| unnamed protein product [Escherichia coli]
gi|145382|gb|AAA83833.1| shikimate kinase II [Escherichia coli]
gi|1657584|gb|AAB18112.1| shikimate kinase II [Escherichia coli str. K-12 substr. MG1655]
gi|1786587|gb|AAC73491.1| shikimate kinase II [Escherichia coli str. K-12 substr. MG1655]
gi|13359895|dbj|BAB33861.1| shikimate kinase II [Escherichia coli O157:H7 str. Sakai]
gi|73854433|gb|AAZ87140.1| shikimate kinase II [Shigella sonnei Ss046]
gi|81244290|gb|ABB64998.1| shikimate kinase II [Shigella boydii Sb227]
gi|85674529|dbj|BAE76169.1| shikimate kinase II [Escherichia coli str. K12 substr. W3110]
gi|110342241|gb|ABG68478.1| shikimate kinase II [Escherichia coli 536]
gi|110613959|gb|ABF02626.1| shikimate kinase II [Shigella flexneri 5 str. 8401]
gi|157065587|gb|ABV04842.1| shikimate kinase [Escherichia coli HS]
gi|157080502|gb|ABV20210.1| shikimate kinase [Escherichia coli E24377A]
gi|169756167|gb|ACA78866.1| Shikimate kinase [Escherichia coli ATCC 8739]
gi|169887810|gb|ACB01517.1| shikimate kinase II [Escherichia coli str. K-12 substr. DH10B]
gi|170521517|gb|ACB19695.1| shikimate kinase [Escherichia coli SMS-3-5]
gi|187768295|gb|EDU32139.1| shikimate kinase [Escherichia coli O157:H7 str. EC4196]
gi|188015901|gb|EDU54023.1| shikimate kinase [Escherichia coli O157:H7 str. EC4113]
gi|188487484|gb|EDU62587.1| shikimate kinase [Escherichia coli 53638]
gi|188999341|gb|EDU68327.1| shikimate kinase [Escherichia coli O157:H7 str. EC4076]
gi|189355990|gb|EDU74409.1| shikimate kinase [Escherichia coli O157:H7 str. EC4401]
gi|189362464|gb|EDU80883.1| shikimate kinase [Escherichia coli O157:H7 str. EC4486]
gi|189368028|gb|EDU86444.1| shikimate kinase [Escherichia coli O157:H7 str. EC4501]
gi|189373645|gb|EDU92061.1| shikimate kinase [Escherichia coli O157:H7 str. EC869]
gi|189377395|gb|EDU95811.1| shikimate kinase [Escherichia coli O157:H7 str. EC508]
gi|190903215|gb|EDV62937.1| shikimate kinase [Escherichia coli B7A]
gi|190906219|gb|EDV65831.1| shikimate kinase [Escherichia coli F11]
gi|192927152|gb|EDV81773.1| shikimate kinase [Escherichia coli E22]
gi|192957957|gb|EDV88399.1| shikimate kinase [Escherichia coli E110019]
gi|194413154|gb|EDX29441.1| shikimate kinase [Escherichia coli B171]
gi|194419125|gb|EDX35208.1| shikimate kinase [Shigella dysenteriae 1012]
gi|194422169|gb|EDX38171.1| shikimate kinase [Escherichia coli 101-1]
gi|208725510|gb|EDZ75111.1| shikimate kinase [Escherichia coli O157:H7 str. EC4206]
gi|208732157|gb|EDZ80845.1| shikimate kinase [Escherichia coli O157:H7 str. EC4045]
gi|208737436|gb|EDZ85120.1| shikimate kinase [Escherichia coli O157:H7 str. EC4042]
gi|209161896|gb|ACI39329.1| shikimate kinase [Escherichia coli O157:H7 str. EC4115]
gi|209744334|gb|ACI70474.1| shikimate kinase II [Escherichia coli]
gi|209744336|gb|ACI70475.1| shikimate kinase II [Escherichia coli]
gi|209744338|gb|ACI70476.1| shikimate kinase II [Escherichia coli]
gi|209744340|gb|ACI70477.1| shikimate kinase II [Escherichia coli]
gi|209744342|gb|ACI70478.1| shikimate kinase II [Escherichia coli]
gi|209910859|dbj|BAG75933.1| shikimate kinase [Escherichia coli SE11]
gi|215263542|emb|CAS07872.1| shikimate kinase II [Escherichia coli O127:H6 str. E2348/69]
gi|217320878|gb|EEC29302.1| shikimate kinase [Escherichia coli O157:H7 str. TW14588]
gi|218350581|emb|CAU96271.1| shikimate kinase II [Escherichia coli 55989]
gi|218359719|emb|CAQ97260.1| shikimate kinase II [Escherichia coli IAI1]
gi|218430767|emb|CAR11641.1| shikimate kinase II [Escherichia coli UMN026]
gi|222032184|emb|CAP74923.1| Shikimate kinase 2 [Escherichia coli LF82]
gi|227838694|gb|EEJ49160.1| shikimate kinase II [Escherichia coli 83972]
gi|238863548|gb|ACR65546.1| shikimate kinase II [Escherichia coli BW2952]
gi|242376165|emb|CAQ30856.1| shikimate kinase II [Escherichia coli BL21(DE3)]
gi|253325674|gb|ACT30276.1| Shikimate kinase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972355|gb|ACT38026.1| shikimate kinase II [Escherichia coli B str. REL606]
gi|253976564|gb|ACT42234.1| shikimate kinase II [Escherichia coli BL21(DE3)]
gi|254590966|gb|ACT70327.1| shikimate kinase II [Escherichia coli O157:H7 str. TW14359]
gi|257752259|dbj|BAI23761.1| shikimate kinase II [Escherichia coli O26:H11 str. 11368]
gi|257757735|dbj|BAI29232.1| shikimate kinase II [Escherichia coli O103:H2 str. 12009]
gi|257762905|dbj|BAI34400.1| shikimate kinase II [Escherichia coli O111:H- str. 11128]
gi|260450424|gb|ACX40846.1| Shikimate kinase [Escherichia coli DH1]
gi|281177559|dbj|BAI53889.1| shikimate kinase [Escherichia coli SE15]
gi|284920195|emb|CBG33254.1| shikimate kinase II [Escherichia coli 042]
gi|290761164|gb|ADD55125.1| Shikimate kinase 2 [Escherichia coli O55:H7 str. CB9615]
gi|291324983|gb|EFE64398.1| shikimate kinase [Escherichia coli B088]
gi|291429359|gb|EFF02379.1| shikimate kinase 2 [Escherichia coli FVEC1412]
gi|298280230|gb|EFI21734.1| aroL [Escherichia coli FVEC1302]
gi|300298628|gb|EFJ55013.1| shikimate kinase [Escherichia coli MS 185-1]
gi|300304247|gb|EFJ58767.1| shikimate kinase [Escherichia coli MS 200-1]
gi|300315354|gb|EFJ65138.1| shikimate kinase [Escherichia coli MS 175-1]
gi|300356037|gb|EFJ71907.1| shikimate kinase [Escherichia coli MS 198-1]
gi|300395980|gb|EFJ79518.1| shikimate kinase [Escherichia coli MS 69-1]
gi|300407528|gb|EFJ91066.1| shikimate kinase [Escherichia coli MS 45-1]
gi|300414579|gb|EFJ97889.1| shikimate kinase [Escherichia coli MS 115-1]
gi|300419657|gb|EFK02968.1| shikimate kinase [Escherichia coli MS 182-1]
gi|300452466|gb|EFK16086.1| shikimate kinase [Escherichia coli MS 116-1]
gi|300461781|gb|EFK25274.1| shikimate kinase [Escherichia coli MS 187-1]
gi|300527161|gb|EFK48230.1| shikimate kinase [Escherichia coli MS 119-7]
gi|300529182|gb|EFK50244.1| shikimate kinase [Escherichia coli MS 107-1]
gi|300843309|gb|EFK71069.1| shikimate kinase [Escherichia coli MS 78-1]
gi|301074530|gb|EFK89336.1| shikimate kinase [Escherichia coli MS 146-1]
gi|305853909|gb|EFM54348.1| shikimate kinase II [Escherichia coli NC101]
gi|306907737|gb|EFN38239.1| Shikimate kinase [Escherichia coli W]
gi|307552293|gb|ADN45068.1| shikimate kinase II [Escherichia coli ABU 83972]
gi|308121543|gb|EFO58805.1| shikimate kinase [Escherichia coli MS 145-7]
gi|309700650|emb|CBI99946.1| shikimate kinase II [Escherichia coli ETEC H10407]
gi|312944965|gb|ADR25792.1| shikimate kinase II [Escherichia coli O83:H1 str. NRG 857C]
gi|315059667|gb|ADT73994.1| shikimate kinase II [Escherichia coli W]
gi|315135071|dbj|BAJ42230.1| shikimate kinase II [Escherichia coli DH1]
gi|315294184|gb|EFU53535.1| shikimate kinase [Escherichia coli MS 153-1]
gi|315299617|gb|EFU58865.1| shikimate kinase [Escherichia coli MS 16-3]
gi|320638376|gb|EFX08090.1| shikimate kinase II [Escherichia coli O157:H7 str. G5101]
gi|320643756|gb|EFX12879.1| shikimate kinase II [Escherichia coli O157:H- str. 493-89]
gi|320649107|gb|EFX17685.1| shikimate kinase II [Escherichia coli O157:H- str. H 2687]
gi|320656000|gb|EFX23916.1| shikimate kinase II [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320665127|gb|EFX32220.1| shikimate kinase II [Escherichia coli O157:H7 str. LSU-61]
gi|323379768|gb|ADX52036.1| Shikimate kinase [Escherichia coli KO11FL]
gi|323938573|gb|EGB34822.1| shikimate kinase [Escherichia coli E1520]
gi|323943194|gb|EGB39350.1| shikimate kinase [Escherichia coli E482]
gi|323945288|gb|EGB41344.1| shikimate kinase [Escherichia coli H120]
gi|323963374|gb|EGB58936.1| shikimate kinase [Escherichia coli H489]
gi|323965335|gb|EGB60793.1| shikimate kinase [Escherichia coli M863]
gi|323972237|gb|EGB67447.1| shikimate kinase [Escherichia coli TA007]
gi|323976132|gb|EGB71225.1| shikimate kinase [Escherichia coli TW10509]
gi|324010113|gb|EGB79332.1| shikimate kinase [Escherichia coli MS 57-2]
gi|324010696|gb|EGB79915.1| shikimate kinase [Escherichia coli MS 60-1]
gi|324016673|gb|EGB85892.1| shikimate kinase [Escherichia coli MS 117-3]
gi|324116872|gb|EGC10785.1| shikimate kinase [Escherichia coli E1167]
gi|326341144|gb|EGD64936.1| Shikimate kinase III [Escherichia coli O157:H7 str. 1044]
gi|331037701|gb|EGI09921.1| shikimate kinase [Escherichia coli H736]
gi|331045721|gb|EGI17847.1| shikimate kinase [Escherichia coli M605]
gi|331051057|gb|EGI23109.1| shikimate kinase [Escherichia coli M718]
gi|331054688|gb|EGI26697.1| shikimate kinase [Escherichia coli TA206]
gi|331060183|gb|EGI32147.1| shikimate kinase [Escherichia coli TA143]
gi|331065959|gb|EGI37843.1| shikimate kinase [Escherichia coli TA271]
gi|331070927|gb|EGI42286.1| shikimate kinase [Escherichia coli TA280]
gi|331076112|gb|EGI47394.1| shikimate kinase [Escherichia coli H591]
gi|331080982|gb|EGI52147.1| shikimate kinase [Escherichia coli H299]
gi|332103884|gb|EGJ07230.1| shikimate kinase II [Shigella sp. D9]
gi|340735641|gb|EGR64697.1| shikimate kinase II [Escherichia coli O104:H4 str. 01-09591]
gi|340741446|gb|EGR75592.1| shikimate kinase II [Escherichia coli O104:H4 str. LB226692]
gi|341920976|gb|EGT70580.1| hypothetical protein C22711_4613 [Escherichia coli O104:H4 str.
C227-11]
gi|342362527|gb|EGU26645.1| shikimate kinase II [Escherichia coli XH140A]
gi|342930582|gb|EGU99304.1| shikimate kinase [Escherichia coli MS 79-10]
gi|344193808|gb|EGV47886.1| shikimate kinase II [Escherichia coli XH001]
gi|354858211|gb|EHF18662.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 04-8351]
gi|354860087|gb|EHF20534.1| shikimate kinase 2 [Escherichia coli O104:H4 str. C227-11]
gi|354866783|gb|EHF27206.1| shikimate kinase 2 [Escherichia coli O104:H4 str. C236-11]
gi|354877119|gb|EHF37479.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 09-7901]
gi|354879426|gb|EHF39764.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-4404]
gi|354884013|gb|EHF44327.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-3677]
gi|354885814|gb|EHF46106.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-4522]
gi|354888881|gb|EHF49135.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-4623]
gi|354901482|gb|EHF61609.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354905713|gb|EHF65796.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354908220|gb|EHF68276.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354918692|gb|EHF78648.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354922380|gb|EHF82295.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-4632 C4]
gi|355418872|gb|AER83069.1| shikimate kinase II [Escherichia coli str. 'clone D i2']
gi|355423792|gb|AER87988.1| shikimate kinase II [Escherichia coli str. 'clone D i14']
gi|359331149|dbj|BAL37596.1| shikimate kinase II [Escherichia coli str. K-12 substr. MDS42]
gi|371594071|gb|EHN82943.1| shikimate kinase 2 [Escherichia coli H494]
gi|371595467|gb|EHN84316.1| shikimate kinase 2 [Escherichia coli TA124]
gi|371613003|gb|EHO01506.1| shikimate kinase [Escherichia coli E101]
gi|373248344|gb|EHP67774.1| shikimate kinase 2 [Escherichia coli 4_1_47FAA]
gi|374357392|gb|AEZ39099.1| shikimate kinase II [Escherichia coli O55:H7 str. RM12579]
gi|375322463|gb|EHS68219.1| shikimate kinase II [Escherichia coli O157:H43 str. T22]
gi|377973449|gb|EHV36789.1| shikimate kinase 2 [Escherichia coli DEC5B]
gi|378069133|gb|EHW31228.1| shikimate kinase 2 [Escherichia coli DEC8D]
gi|378116866|gb|EHW78384.1| shikimate kinase 2 [Escherichia coli DEC10B]
gi|380349317|gb|EIA37589.1| shikimate kinase II [Escherichia coli SCI-07]
gi|383394335|gb|AFH19293.1| shikimate kinase II [Escherichia coli KO11FL]
gi|383403880|gb|AFH10123.1| shikimate kinase II [Escherichia coli W]
gi|383465930|gb|EID60951.1| shikimate kinase II [Shigella flexneri 5a str. M90T]
gi|385155354|gb|EIF17358.1| shikimate kinase II [Escherichia coli O32:H37 str. P4]
gi|385539877|gb|EIF86704.1| shikimate kinase 2 [Escherichia coli M919]
gi|385704805|gb|EIG41877.1| shikimate kinase 2 [Escherichia coli B799]
gi|385712861|gb|EIG49800.1| shikimate kinase 2 [Escherichia coli H730]
gi|386141584|gb|EIG82734.1| shikimate kinase II [Escherichia coli 1.2741]
gi|386148825|gb|EIG95260.1| shikimate kinase II [Escherichia coli 97.0246]
gi|386150660|gb|EIH01949.1| shikimate kinase II [Escherichia coli 5.0588]
gi|386157356|gb|EIH13698.1| shikimate kinase II [Escherichia coli 97.0259]
gi|386164590|gb|EIH26376.1| shikimate kinase II [Escherichia coli 1.2264]
gi|386169496|gb|EIH36004.1| shikimate kinase II [Escherichia coli 96.0497]
gi|386177771|gb|EIH55250.1| shikimate kinase II [Escherichia coli 3.2608]
gi|386186451|gb|EIH69167.1| shikimate kinase II [Escherichia coli 93.0624]
gi|386191678|gb|EIH80419.1| shikimate kinase II [Escherichia coli 4.0522]
gi|386193161|gb|EIH87460.1| shikimate kinase II [Escherichia coli JB1-95]
gi|386198783|gb|EIH97774.1| shikimate kinase II [Escherichia coli 96.154]
gi|386205898|gb|EII10404.1| shikimate kinase II [Escherichia coli 5.0959]
gi|386209743|gb|EII20230.1| shikimate kinase II [Escherichia coli 9.0111]
gi|386217132|gb|EII33621.1| shikimate kinase II [Escherichia coli 4.0967]
gi|386225940|gb|EII48265.1| shikimate kinase II [Escherichia coli 2.3916]
gi|386230334|gb|EII57689.1| shikimate kinase II [Escherichia coli 3.3884]
gi|386236900|gb|EII68872.1| shikimate kinase II [Escherichia coli 2.4168]
gi|386247188|gb|EII93361.1| shikimate kinase II [Escherichia coli TW07793]
gi|386252480|gb|EIJ02171.1| shikimate kinase II [Escherichia coli B41]
gi|386257340|gb|EIJ12831.1| shikimate kinase II [Escherichia coli 900105 (10e)]
gi|386794438|gb|AFJ27472.1| shikimate kinase II [Escherichia coli Xuzhou21]
gi|388341898|gb|EIL07975.1| shikimate kinase II [Escherichia coli O111:H11 str. CVM9534]
gi|388345167|gb|EIL10953.1| shikimate kinase II [Escherichia coli O103:H25 str. CVM9340]
gi|388346494|gb|EIL12211.1| shikimate kinase II [Escherichia coli O103:H2 str. CVM9450]
gi|388347973|gb|EIL13615.1| shikimate kinase II [Escherichia coli O111:H11 str. CVM9545]
gi|388354804|gb|EIL19690.1| shikimate kinase II [Escherichia coli O111:H8 str. CVM9570]
gi|388368675|gb|EIL32300.1| shikimate kinase II [Escherichia coli O111:H8 str. CVM9574]
gi|388375294|gb|EIL38320.1| shikimate kinase [Escherichia coli O26:H11 str. CVM10026]
gi|388377688|gb|EIL40483.1| shikimate kinase II [Escherichia coli O26:H11 str. CVM9942]
gi|388394293|gb|EIL55596.1| shikimate kinase II [Escherichia coli 541-15]
gi|388395159|gb|EIL56388.1| shikimate kinase II [Escherichia coli KD2]
gi|388400784|gb|EIL61482.1| shikimate kinase II [Escherichia coli 75]
gi|388406252|gb|EIL66658.1| shikimate kinase II [Escherichia coli 541-1]
gi|388420509|gb|EIL80201.1| shikimate kinase II [Escherichia coli CUMT8]
gi|390720372|gb|EIN93084.1| shikimate kinase 2 [Escherichia coli PA22]
gi|390795132|gb|EIO62417.1| shikimate kinase 2 [Escherichia coli TW10246]
gi|390842658|gb|EIP06497.1| shikimate kinase 2 [Escherichia coli TW09195]
gi|390895231|gb|EIP54710.1| shikimate kinase 2 [Escherichia coli EC4436]
gi|390912061|gb|EIP70742.1| shikimate kinase 2 [Escherichia coli EC1734]
gi|394390713|gb|EJE67673.1| shikimate kinase II [Escherichia coli O111:H8 str. CVM9602]
gi|394394559|gb|EJE71122.1| shikimate kinase [Escherichia coli O26:H11 str. CVM10224]
gi|394399993|gb|EJE75954.1| shikimate kinase II [Escherichia coli O111:H8 str. CVM9634]
gi|394405936|gb|EJE81033.1| shikimate kinase II [Escherichia coli O111:H11 str. CVM9553]
gi|394409107|gb|EJE83694.1| shikimate kinase II [Escherichia coli O111:H11 str. CVM9455]
gi|394412047|gb|EJE86227.1| shikimate kinase II [Escherichia coli O26:H11 str. CVM10021]
gi|394431048|gb|EJF03291.1| shikimate kinase II [Escherichia coli O26:H11 str. CVM10030]
gi|394433311|gb|EJF05343.1| shikimate kinase II [Escherichia coli O26:H11 str. CVM9952]
gi|404292751|gb|EJZ49542.1| shikimate kinase 2 [Escherichia sp. 1_1_43]
gi|406779150|gb|AFS58574.1| shikimate kinase II [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407055731|gb|AFS75782.1| shikimate kinase II [Escherichia coli O104:H4 str. 2011C-3493]
gi|407063870|gb|AFS84917.1| shikimate kinase II [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408259722|gb|EKI80876.1| shikimate kinase 2 [Escherichia coli EC1846]
gi|408338600|gb|EKJ53246.1| shikimate kinase 2 [Escherichia coli EC1870]
gi|412961636|emb|CCK45542.1| shikimate kinase II [Escherichia coli chi7122]
gi|412968251|emb|CCJ42867.1| shikimate kinase II [Escherichia coli]
gi|421934205|gb|EKT91982.1| shikimate kinase [Escherichia coli O111:H11 str. CFSAN001630]
gi|421945372|gb|EKU02589.1| shikimate kinase [Escherichia coli O26:H11 str. CFSAN001629]
gi|421946739|gb|EKU03853.1| shikimate kinase [Escherichia coli O111:H8 str. CFSAN001632]
gi|429351494|gb|EKY88214.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-02030]
gi|429352197|gb|EKY88913.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-02033-1]
gi|429352955|gb|EKY89664.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-02092]
gi|429366868|gb|EKZ03469.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-02093]
gi|429367779|gb|EKZ04371.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-02281]
gi|429370274|gb|EKZ06840.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-02318]
gi|429382661|gb|EKZ19125.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-02913]
gi|429384894|gb|EKZ21348.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-03943]
gi|429385417|gb|EKZ21870.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-03439]
gi|429397110|gb|EKZ33457.1| shikimate kinase 2 [Escherichia coli O104:H4 str. 11-04080]
gi|429399338|gb|EKZ35659.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-9450]
gi|429399646|gb|EKZ35966.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-9990]
gi|429410400|gb|EKZ46622.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-4984]
gi|429412300|gb|EKZ48497.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-4986]
gi|429419285|gb|EKZ55423.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-4987]
gi|429427844|gb|EKZ63924.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-5603]
gi|429434688|gb|EKZ70712.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-4988]
gi|429435512|gb|EKZ71530.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-5604]
gi|429440053|gb|EKZ76032.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec12-0465]
gi|429444653|gb|EKZ80598.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-6006]
gi|429450958|gb|EKZ86850.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec12-0466]
gi|429456450|gb|EKZ92295.1| shikimate kinase 2 [Escherichia coli O104:H4 str. Ec11-9941]
gi|430880683|gb|ELC03958.1| shikimate kinase 2 [Escherichia coli KTE2]
gi|430888835|gb|ELC11506.1| shikimate kinase 2 [Escherichia coli KTE10]
gi|430901373|gb|ELC23341.1| shikimate kinase 2 [Escherichia coli KTE12]
gi|430909896|gb|ELC31254.1| shikimate kinase 2 [Escherichia coli KTE16]
gi|430911996|gb|ELC33247.1| shikimate kinase 2 [Escherichia coli KTE15]
gi|430918645|gb|ELC39646.1| shikimate kinase 2 [Escherichia coli KTE25]
gi|430923051|gb|ELC43789.1| shikimate kinase 2 [Escherichia coli KTE21]
gi|430929218|gb|ELC49729.1| shikimate kinase 2 [Escherichia coli KTE26]
gi|430932755|gb|ELC53174.1| shikimate kinase 2 [Escherichia coli KTE28]
gi|430938394|gb|ELC58635.1| shikimate kinase 2 [Escherichia coli KTE39]
gi|430943718|gb|ELC63824.1| shikimate kinase 2 [Escherichia coli KTE44]
gi|430947371|gb|ELC67069.1| shikimate kinase 2 [Escherichia coli KTE181]
gi|430947664|gb|ELC67361.1| shikimate kinase 2 [Escherichia coli KTE178]
gi|430956127|gb|ELC74803.1| shikimate kinase 2 [Escherichia coli KTE187]
gi|430966613|gb|ELC83976.1| shikimate kinase 2 [Escherichia coli KTE188]
gi|430974630|gb|ELC91553.1| shikimate kinase 2 [Escherichia coli KTE193]
gi|430985189|gb|ELD01795.1| shikimate kinase 2 [Escherichia coli KTE201]
gi|430992442|gb|ELD08813.1| shikimate kinase 2 [Escherichia coli KTE204]
gi|430999889|gb|ELD15963.1| shikimate kinase 2 [Escherichia coli KTE206]
gi|431010346|gb|ELD24694.1| shikimate kinase 2 [Escherichia coli KTE208]
gi|431010767|gb|ELD25111.1| shikimate kinase 2 [Escherichia coli KTE210]
gi|431013089|gb|ELD26823.1| shikimate kinase 2 [Escherichia coli KTE213]
gi|431018519|gb|ELD31950.1| shikimate kinase 2 [Escherichia coli KTE212]
gi|431027774|gb|ELD40819.1| shikimate kinase 2 [Escherichia coli KTE214]
gi|431032227|gb|ELD44938.1| shikimate kinase 2 [Escherichia coli KTE216]
gi|431042099|gb|ELD52591.1| shikimate kinase 2 [Escherichia coli KTE220]
gi|431044917|gb|ELD55172.1| shikimate kinase 2 [Escherichia coli KTE224]
gi|431045578|gb|ELD55808.1| shikimate kinase 2 [Escherichia coli KTE228]
gi|431054662|gb|ELD64231.1| shikimate kinase 2 [Escherichia coli KTE230]
gi|431057149|gb|ELD66619.1| shikimate kinase 2 [Escherichia coli KTE233]
gi|431063770|gb|ELD72984.1| shikimate kinase 2 [Escherichia coli KTE234]
gi|431064495|gb|ELD73362.1| shikimate kinase 2 [Escherichia coli KTE235]
gi|431078277|gb|ELD85335.1| shikimate kinase 2 [Escherichia coli KTE236]
gi|431085582|gb|ELD91687.1| shikimate kinase 2 [Escherichia coli KTE237]
gi|431087029|gb|ELD93034.1| shikimate kinase 2 [Escherichia coli KTE47]
gi|431094459|gb|ELE00091.1| shikimate kinase 2 [Escherichia coli KTE49]
gi|431099533|gb|ELE04553.1| shikimate kinase 2 [Escherichia coli KTE51]
gi|431103061|gb|ELE07731.1| shikimate kinase 2 [Escherichia coli KTE53]
gi|431108769|gb|ELE12740.1| shikimate kinase 2 [Escherichia coli KTE56]
gi|431132952|gb|ELE34950.1| shikimate kinase 2 [Escherichia coli KTE60]
gi|431140496|gb|ELE42262.1| shikimate kinase 2 [Escherichia coli KTE67]
gi|431143949|gb|ELE45657.1| shikimate kinase 2 [Escherichia coli KTE66]
gi|431151436|gb|ELE52451.1| shikimate kinase 2 [Escherichia coli KTE72]
gi|431158104|gb|ELE58725.1| shikimate kinase 2 [Escherichia coli KTE75]
gi|431162846|gb|ELE63286.1| shikimate kinase 2 [Escherichia coli KTE76]
gi|431165109|gb|ELE65467.1| shikimate kinase 2 [Escherichia coli KTE77]
gi|431173985|gb|ELE74046.1| shikimate kinase 2 [Escherichia coli KTE81]
gi|431174476|gb|ELE74521.1| shikimate kinase 2 [Escherichia coli KTE80]
gi|431184305|gb|ELE84063.1| shikimate kinase 2 [Escherichia coli KTE86]
gi|431185081|gb|ELE84811.1| shikimate kinase 2 [Escherichia coli KTE83]
gi|431193288|gb|ELE92624.1| shikimate kinase 2 [Escherichia coli KTE87]
gi|431195584|gb|ELE94553.1| shikimate kinase 2 [Escherichia coli KTE93]
gi|431203748|gb|ELF02338.1| shikimate kinase 2 [Escherichia coli KTE111]
gi|431204643|gb|ELF03201.1| shikimate kinase 2 [Escherichia coli KTE116]
gi|431207614|gb|ELF05868.1| shikimate kinase 2 [Escherichia coli KTE142]
gi|431213712|gb|ELF11568.1| shikimate kinase 2 [Escherichia coli KTE119]
gi|431225194|gb|ELF22399.1| shikimate kinase 2 [Escherichia coli KTE156]
gi|431237315|gb|ELF32315.1| shikimate kinase 2 [Escherichia coli KTE162]
gi|431246900|gb|ELF41143.1| shikimate kinase 2 [Escherichia coli KTE169]
gi|431247092|gb|ELF41334.1| shikimate kinase 2 [Escherichia coli KTE171]
gi|431252941|gb|ELF46455.1| shikimate kinase 2 [Escherichia coli KTE6]
gi|431259625|gb|ELF51988.1| shikimate kinase 2 [Escherichia coli KTE8]
gi|431266999|gb|ELF58532.1| shikimate kinase 2 [Escherichia coli KTE9]
gi|431268314|gb|ELF59788.1| shikimate kinase 2 [Escherichia coli KTE17]
gi|431276606|gb|ELF67626.1| shikimate kinase 2 [Escherichia coli KTE18]
gi|431278515|gb|ELF69505.1| shikimate kinase 2 [Escherichia coli KTE45]
gi|431286314|gb|ELF77140.1| shikimate kinase 2 [Escherichia coli KTE23]
gi|431286803|gb|ELF77623.1| shikimate kinase 2 [Escherichia coli KTE42]
gi|431295780|gb|ELF85512.1| shikimate kinase 2 [Escherichia coli KTE43]
gi|431300581|gb|ELF90132.1| shikimate kinase 2 [Escherichia coli KTE29]
gi|431311957|gb|ELG00105.1| shikimate kinase 2 [Escherichia coli KTE46]
gi|431313329|gb|ELG01302.1| shikimate kinase 2 [Escherichia coli KTE48]
gi|431319229|gb|ELG06913.1| shikimate kinase 2 [Escherichia coli KTE50]
gi|431320688|gb|ELG08318.1| shikimate kinase 2 [Escherichia coli KTE54]
gi|431332009|gb|ELG19252.1| shikimate kinase 2 [Escherichia coli KTE63]
gi|431342429|gb|ELG29408.1| shikimate kinase 2 [Escherichia coli KTE78]
gi|431345820|gb|ELG32734.1| shikimate kinase 2 [Escherichia coli KTE79]
gi|431351259|gb|ELG38049.1| shikimate kinase 2 [Escherichia coli KTE84]
gi|431357390|gb|ELG44057.1| shikimate kinase 2 [Escherichia coli KTE101]
gi|431357801|gb|ELG44467.1| shikimate kinase 2 [Escherichia coli KTE91]
gi|431368899|gb|ELG55130.1| shikimate kinase 2 [Escherichia coli KTE115]
gi|431380136|gb|ELG65036.1| shikimate kinase 2 [Escherichia coli KTE135]
gi|431388604|gb|ELG72327.1| shikimate kinase 2 [Escherichia coli KTE136]
gi|431391839|gb|ELG75443.1| shikimate kinase 2 [Escherichia coli KTE140]
gi|431397204|gb|ELG80660.1| shikimate kinase 2 [Escherichia coli KTE141]
gi|431402510|gb|ELG85822.1| shikimate kinase 2 [Escherichia coli KTE144]
gi|431405149|gb|ELG88392.1| shikimate kinase 2 [Escherichia coli KTE147]
gi|431408095|gb|ELG91287.1| shikimate kinase 2 [Escherichia coli KTE146]
gi|431413506|gb|ELG96271.1| shikimate kinase 2 [Escherichia coli KTE154]
gi|431419941|gb|ELH02275.1| shikimate kinase 2 [Escherichia coli KTE158]
gi|431425457|gb|ELH07527.1| shikimate kinase 2 [Escherichia coli KTE165]
gi|431429984|gb|ELH11818.1| shikimate kinase 2 [Escherichia coli KTE192]
gi|431437367|gb|ELH18877.1| shikimate kinase 2 [Escherichia coli KTE194]
gi|431447148|gb|ELH27890.1| shikimate kinase 2 [Escherichia coli KTE190]
gi|431447391|gb|ELH28123.1| shikimate kinase 2 [Escherichia coli KTE173]
gi|431449482|gb|ELH30055.1| shikimate kinase 2 [Escherichia coli KTE175]
gi|431454730|gb|ELH35088.1| shikimate kinase 2 [Escherichia coli KTE183]
gi|431456757|gb|ELH37100.1| shikimate kinase 2 [Escherichia coli KTE184]
gi|431462961|gb|ELH43155.1| shikimate kinase 2 [Escherichia coli KTE196]
gi|431470652|gb|ELH50549.1| shikimate kinase 2 [Escherichia coli KTE197]
gi|431475858|gb|ELH55662.1| shikimate kinase 2 [Escherichia coli KTE203]
gi|431478667|gb|ELH58412.1| shikimate kinase 2 [Escherichia coli KTE202]
gi|431482215|gb|ELH61918.1| shikimate kinase 2 [Escherichia coli KTE209]
gi|431485703|gb|ELH65360.1| shikimate kinase 2 [Escherichia coli KTE207]
gi|431496514|gb|ELH76097.1| shikimate kinase 2 [Escherichia coli KTE211]
gi|431498739|gb|ELH77924.1| shikimate kinase 2 [Escherichia coli KTE217]
gi|431506218|gb|ELH84816.1| shikimate kinase 2 [Escherichia coli KTE215]
gi|431509518|gb|ELH87767.1| shikimate kinase 2 [Escherichia coli KTE218]
gi|431514172|gb|ELH92014.1| shikimate kinase 2 [Escherichia coli KTE223]
gi|431537513|gb|ELI13630.1| shikimate kinase 2 [Escherichia coli KTE105]
gi|431545939|gb|ELI20582.1| shikimate kinase 2 [Escherichia coli KTE109]
gi|431555501|gb|ELI29341.1| shikimate kinase 2 [Escherichia coli KTE113]
gi|431560127|gb|ELI33648.1| shikimate kinase 2 [Escherichia coli KTE112]
gi|431560340|gb|ELI33854.1| shikimate kinase 2 [Escherichia coli KTE117]
gi|431572850|gb|ELI45674.1| shikimate kinase 2 [Escherichia coli KTE120]
gi|431574170|gb|ELI46952.1| shikimate kinase 2 [Escherichia coli KTE124]
gi|431575821|gb|ELI48544.1| shikimate kinase 2 [Escherichia coli KTE122]
gi|431588309|gb|ELI59594.1| shikimate kinase 2 [Escherichia coli KTE125]
gi|431591130|gb|ELI62130.1| shikimate kinase 2 [Escherichia coli KTE128]
gi|431601164|gb|ELI70681.1| shikimate kinase 2 [Escherichia coli KTE131]
gi|431605981|gb|ELI75365.1| shikimate kinase 2 [Escherichia coli KTE133]
gi|431610155|gb|ELI79456.1| shikimate kinase 2 [Escherichia coli KTE137]
gi|431615162|gb|ELI84292.1| shikimate kinase 2 [Escherichia coli KTE138]
gi|431619826|gb|ELI88723.1| shikimate kinase 2 [Escherichia coli KTE139]
gi|431622803|gb|ELI91488.1| shikimate kinase 2 [Escherichia coli KTE145]
gi|431631718|gb|ELJ00024.1| shikimate kinase 2 [Escherichia coli KTE150]
gi|431634548|gb|ELJ02789.1| shikimate kinase 2 [Escherichia coli KTE148]
gi|431636840|gb|ELJ04959.1| shikimate kinase 2 [Escherichia coli KTE153]
gi|431650060|gb|ELJ17397.1| shikimate kinase 2 [Escherichia coli KTE160]
gi|431651587|gb|ELJ18826.1| shikimate kinase 2 [Escherichia coli KTE163]
gi|431663352|gb|ELJ30114.1| shikimate kinase 2 [Escherichia coli KTE166]
gi|431664987|gb|ELJ31714.1| shikimate kinase 2 [Escherichia coli KTE167]
gi|431666639|gb|ELJ33266.1| shikimate kinase 2 [Escherichia coli KTE168]
gi|431676739|gb|ELJ42822.1| shikimate kinase 2 [Escherichia coli KTE174]
gi|431682016|gb|ELJ47785.1| shikimate kinase 2 [Escherichia coli KTE177]
gi|431696204|gb|ELJ61391.1| shikimate kinase 2 [Escherichia coli KTE232]
gi|431709740|gb|ELJ74188.1| shikimate kinase 2 [Escherichia coli KTE88]
gi|431710538|gb|ELJ74912.1| shikimate kinase 2 [Escherichia coli KTE82]
gi|431721793|gb|ELJ85785.1| shikimate kinase 2 [Escherichia coli KTE90]
gi|431725745|gb|ELJ89584.1| shikimate kinase 2 [Escherichia coli KTE94]
gi|431726324|gb|ELJ90134.1| shikimate kinase 2 [Escherichia coli KTE95]
gi|431733095|gb|ELJ96536.1| shikimate kinase 2 [Escherichia coli KTE97]
gi|431735974|gb|ELJ99316.1| shikimate kinase 2 [Escherichia coli KTE99]
gi|443420920|gb|AGC85824.1| shikimate kinase [Escherichia coli APEC O78]
gi|444614865|gb|ELV89090.1| shikimate kinase 2 [Escherichia coli PA13]
gi|449322852|gb|EMD12831.1| shikimate kinase [Escherichia coli O08]
gi|449325041|gb|EMD14959.1| shikimate kinase [Escherichia coli SEPT362]
gi|449325101|gb|EMD15017.1| shikimate kinase [Escherichia coli S17]
Length = 174
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFL+G G GKTTVG L+D+L+ F D+D++++ + T VA+I + A FR E
Sbjct: 3 QPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT-VAEIVEREEWAGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
+ AL+ ++ P V+ATGGG ++ N FM+ GI V+L P+ L R+ A
Sbjct: 62 TAALEAVT-APSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQA 113
>gi|85708391|ref|ZP_01039457.1| shikimate kinase [Erythrobacter sp. NAP1]
gi|85689925|gb|EAQ29928.1| shikimate kinase [Erythrobacter sp. NAP1]
Length = 188
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 5/129 (3%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+A +D + + LVG+MG+GK+TVG LS L F D+D +E+ S+ +IF E GE
Sbjct: 15 IARTID-KPIVLVGLMGAGKSTVGRRLSSLLRRDFVDADDAIEE-AAQRSIPEIFDEFGE 72
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRP-LNWRFMRQGITVFLNVPLDALARRIAA 206
AYFR+ E + + +L V+ATGGGA V P ++Q I V+++ +D L R +
Sbjct: 73 AYFRDGERRVIARLIEEKHGVIATGGGAFVDPETRALILKQAIAVWIDCDIDTLVERTSR 132
Query: 207 VGTDSFPLL 215
T PLL
Sbjct: 133 RNTR--PLL 139
>gi|209551172|ref|YP_002283089.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|254806782|sp|B5ZSI5.1|AROK_RHILW RecName: Full=Shikimate kinase; Short=SK
gi|209536928|gb|ACI56863.1| Shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 196
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 81 LKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQ 140
LK + R + L + L LVG+MG+GK+ VG I++ L F DSD +E++ ++ +
Sbjct: 12 LKDRAR---AALGSRNLILVGLMGAGKSAVGRIVASQLGIPFIDSDHEIERV-SRMTIPE 67
Query: 141 IFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWR-FMRQGITVFLNVPLDA 199
+F GE FR E++ +++L +VV+TGGGA + R ++ G++V+L LD
Sbjct: 68 LFAAYGEDEFRALETRVMKRLLKGGPRVVSTGGGAFINERTRRHIIKGGVSVWLKADLDV 127
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
L R+ D+ PLL ++ L L R YA AD TV
Sbjct: 128 LWERVNK--RDNRPLLKTENPKQ------TLEGLMNARYPIYAQADLTV 168
>gi|320539811|ref|ZP_08039470.1| putative shikimate kinase I [Serratia symbiotica str. Tucson]
gi|320029997|gb|EFW12017.1| putative shikimate kinase I [Serratia symbiotica str. Tucson]
Length = 173
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 12/172 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GK+T+G L+ L+ F DSD+ +E+ G V +F GEA FR+ E K
Sbjct: 7 IFLVGPMGAGKSTIGRQLAQQLNMEFFDSDQEIEQRTGA-DVGWVFDVEGEAGFRDREEK 65
Query: 157 ALQKLSLVPQQVVATGGGAV-VRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD-SFPL 214
+ +L+ V+ATGGG+V R R +G+ V+L ++ +++A D PL
Sbjct: 66 VINELTENKGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKRPL 122
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACIGLKDVLDI 265
L DS L AL+KER+ Y AD T+ + +A + ++++
Sbjct: 123 LQVDSPPR-----EVLEALAKERNPLYEEIADVTIRTDDQSAKVVANQIINM 169
>gi|296125838|ref|YP_003633090.1| shikimate kinase [Brachyspira murdochii DSM 12563]
gi|296017654|gb|ADG70891.1| Shikimate kinase [Brachyspira murdochii DSM 12563]
Length = 180
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 85/151 (56%), Gaps = 13/151 (8%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
+D + +F++G+ G GK+ + ++L++ L+YT D D ++E+ T + IF ++GE YFR
Sbjct: 7 IDNKVIFVIGLPGCGKSALSKLLAEKLNYTLYDMDSFIEQKEEKT-ITDIFADNGEEYFR 65
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTD 210
+ ES+ L++L+ + V++TGGG V+ N M++ G+T+F++ + + + I
Sbjct: 66 KVESEVLEELAGMNNAVISTGGGIVLLEKNRNIMKEKGLTIFIDRNPEIILQNIDP---R 122
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAY 241
PLL D L LSK+R Y
Sbjct: 123 ERPLLAKDK--------NKLLELSKQRDNLY 145
>gi|401678778|ref|ZP_10810733.1| AroL Protein [Enterobacter sp. SST3]
gi|400213969|gb|EJO44900.1| AroL Protein [Enterobacter sp. SST3]
Length = 174
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 15/153 (9%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +FLVG G GKTTVG L+ F D+D +++ G T +A I ++ G FR E
Sbjct: 3 QPIFLVGPRGCGKTTVGLELARVCHRQFVDTDHWLQTEAGKT-IADIVEQEGWESFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+ AL+ ++ P V+ATGGG V+ N FMR+ GI ++L+ P+ AL R+ ++FP
Sbjct: 62 TAALKAVT-TPSAVIATGGGIVLAECNRHFMREKGIVIYLSAPVSALVGRL-----EAFP 115
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADA 246
+ A T+ L++E SE A DA
Sbjct: 116 ------EEGQRPALTS-RPLNEEVSEVLAERDA 141
>gi|374314346|ref|YP_005060775.1| shikimate kinase I [Serratia symbiotica str. 'Cinara cedri']
gi|363988572|gb|AEW44763.1| shikimate kinase I [Serratia symbiotica str. 'Cinara cedri']
Length = 173
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 94/172 (54%), Gaps = 12/172 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GK+T+G L+ L+ F DSD+ +E+ G V +F GE+ FR+ E++
Sbjct: 7 IFLVGPMGAGKSTIGRQLAQQLNMEFFDSDQEIEQRTGA-DVGWVFDVEGESGFRDREAR 65
Query: 157 ALQKLSLVPQQVVATGGGAV-VRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD-SFPL 214
+ +L+ V+ATGGG+V R R +G+ ++L ++ +++A D PL
Sbjct: 66 VINELTENQGIVLATGGGSVKSRETRNRLSARGVVIYLETTIE---KQLARTQRDKKRPL 122
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACIGLKDVLDI 265
L +S F L AL+KER+ Y AD T+ + +A + ++++
Sbjct: 123 LQVNSP-----PFEVLEALAKERNPLYEEIADVTIRTTDQSAKVVANQIINM 169
>gi|349573635|ref|ZP_08885611.1| shikimate kinase [Neisseria shayeganii 871]
gi|348014794|gb|EGY53662.1| shikimate kinase [Neisseria shayeganii 871]
Length = 182
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 85/154 (55%), Gaps = 12/154 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G+MG+GKTT G+ L+ L Y F DSD+ + + G S+A IF+ GE FR E+
Sbjct: 11 IFLIGLMGAGKTTQGKRLASLLHYPFIDSDQEIVQ-RTGVSIATIFELEGENGFRNRETA 69
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTD-SFPL 214
+ +LS V+ATGGGAV+R N +++ +G V+L+ + L +R V TD S PL
Sbjct: 70 VIDELSRRRPVVLATGGGAVLREENRGYLKSRGTVVYLHAVPEVLYQR---VKTDKSRPL 126
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYANADATV 248
L T LS L ++R Y + V
Sbjct: 127 L------QVTDPLGKLSELYQQRDPLYRDTAHIV 154
>gi|300903351|ref|ZP_07121279.1| shikimate kinase [Escherichia coli MS 84-1]
gi|301301532|ref|ZP_07207667.1| shikimate kinase [Escherichia coli MS 124-1]
gi|415862659|ref|ZP_11536099.1| shikimate kinase [Escherichia coli MS 85-1]
gi|300404646|gb|EFJ88184.1| shikimate kinase [Escherichia coli MS 84-1]
gi|300843029|gb|EFK70789.1| shikimate kinase [Escherichia coli MS 124-1]
gi|315256209|gb|EFU36177.1| shikimate kinase [Escherichia coli MS 85-1]
Length = 174
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFL+G G GKTTVG L+D+L+ F D+D++++ + T VA+I + A FR E
Sbjct: 3 QPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT-VAEIVEREEWAGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
+ AL+ ++ P V+ATGGG ++ N FM+ GI V+L P+ L R+ A
Sbjct: 62 TAALEAVT-APSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQA 113
>gi|163859232|ref|YP_001633530.1| shikimate kinase [Bordetella petrii DSM 12804]
gi|163262960|emb|CAP45263.1| aroK2 [Bordetella petrii]
Length = 206
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVGMMG+GKTT+G L+ L F D D +E G V IF+ GE FR+ E+
Sbjct: 37 IFLVGMMGAGKTTIGRGLARVLGREFIDLDHELEARCG-VRVPVIFEIEGEGGFRKREAA 95
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
AL + V+ATGGGAV+ P N R +R+ G+ V+L +D L RR
Sbjct: 96 ALDHCTQRRGIVLATGGGAVLAPENRRLLRERGVVVYLRASVDELFRR 143
>gi|85816921|gb|EAQ38106.1| Shikimate kinase [Dokdonia donghaensis MED134]
Length = 173
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 10/137 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MGSGK+T+G +L++ L Y F D D Y+ + G S+++IFK GE YFR+ ES
Sbjct: 3 IYLVGYMGSGKSTIGPLLAEVLSYKFIDFDTYITQ-KEGMSISEIFKNKGEIYFRKAEST 61
Query: 157 ALQKL--SLVPQQVVATGGGAVVRPLNWRFMR--QGITVFLNVPLDALARRIAAVGTDSF 212
LQ+L Q VVA GGG N + ++ TV+LN LA+R+ + +
Sbjct: 62 YLQQLLEEESEQVVVALGGGTPCYGTNLQVLKDSDAQTVYLNWHFKTLAQRLWSAKEER- 120
Query: 213 PLL----DYDSADSYTK 225
PL+ Y+ + Y +
Sbjct: 121 PLIASMQSYEDLEDYVR 137
>gi|357030853|ref|ZP_09092797.1| shikimate kinase [Gluconobacter morbifer G707]
gi|356415547|gb|EHH69190.1| shikimate kinase [Gluconobacter morbifer G707]
Length = 563
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GMMG GKTT+G L+ F D+D +E+ G S+ +IF GEA FR+ E
Sbjct: 24 RTIVLIGMMGVGKTTIGRRLAQFYGLPFVDADSEIER-AAGCSIPEIFARHGEASFRDGE 82
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
+ +Q+L P ++ATGGGA + +R Q ++++L P+ L +R+++ G P
Sbjct: 83 RRVIQRLLDGPPCLLATGGGAWMDAQTRHIVRQQAVSIWLKAPVHVLLKRVSSRG--GRP 140
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + ++ L R YA AD +
Sbjct: 141 LLAQGDPEQI------MTGLVGARYPLYAEADIII 169
>gi|293408531|ref|ZP_06652370.1| shikimate kinase [Escherichia coli B354]
gi|300936371|ref|ZP_07151299.1| shikimate kinase [Escherichia coli MS 21-1]
gi|422832105|ref|ZP_16880228.1| shikimate kinase 2 [Escherichia coli B093]
gi|432678801|ref|ZP_19914204.1| shikimate kinase 2 [Escherichia coli KTE143]
gi|291471709|gb|EFF14192.1| shikimate kinase [Escherichia coli B354]
gi|300458477|gb|EFK21970.1| shikimate kinase [Escherichia coli MS 21-1]
gi|371615671|gb|EHO04067.1| shikimate kinase 2 [Escherichia coli B093]
gi|431224994|gb|ELF22203.1| shikimate kinase 2 [Escherichia coli KTE143]
Length = 174
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFL+G G GKTTVG L+D+L+ F D+D++++ + T VA+I + A FR E
Sbjct: 3 QPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT-VAEIVEREEWAGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
+ AL+ ++ P V+ATGGG ++ N FM+ GI V+L P+ L R+ A
Sbjct: 62 TAALEAVT-APSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQA 113
>gi|407768620|ref|ZP_11115998.1| shikimate kinase [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407288304|gb|EKF13782.1| shikimate kinase [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 200
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+ + L G+ L +G+MG+GK+ +G +++ ALD F D+D+ +E+ G S+A IFK GE
Sbjct: 18 IRTGLKGRPLVFIGLMGAGKSCIGRMVAKALDLDFVDADREIEE-AAGCSIADIFKLYGE 76
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRF-MRQGITVFLNVPLDALARRIAA 206
FRE E + + +L V+ATGGGA +R + + ++V+L LD L +R +
Sbjct: 77 EAFREGEERVIARLLDGEPLVLATGGGAFIREKTRELILEKSVSVWLRADLDLLLQRTS- 135
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANAD 245
G PLL+ L L + R YA AD
Sbjct: 136 -GRTHRPLLNNGDPRQI------LGDLIEARYPVYAGAD 167
>gi|406936069|gb|EKD69881.1| shikimate kinase I, partial [uncultured bacterium]
Length = 147
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 78/148 (52%), Gaps = 10/148 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GKT+VG L+ L+ F DSD+ +E M G S++ IF G A FR+ E K
Sbjct: 8 IFLVGPMGAGKTSVGRYLAKKLNKDFYDSDEEIENRM-GVSLSWIFDLEGMAGFRQREMK 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+ +LS + V++TGGG V P F+RQ G V++ V L+ R+ PLL
Sbjct: 67 VIDELSQLHNIVLSTGGGCVETPEVREFLRQRGTVVYMEVSLETQLNRLKR--DKKRPLL 124
Query: 216 DYDSADSYTKAFTALSALSKERSEAYAN 243
D+ L L +ER Y N
Sbjct: 125 QGDNPQE------VLIRLWEEREPFYEN 146
>gi|224025225|ref|ZP_03643591.1| hypothetical protein BACCOPRO_01959 [Bacteroides coprophilus DSM
18228]
gi|224018461|gb|EEF76459.1| hypothetical protein BACCOPRO_01959 [Bacteroides coprophilus DSM
18228]
Length = 184
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 86/170 (50%), Gaps = 17/170 (10%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G MGSGKTT+G+ + A F D D Y+E+ + T +++IF E GE+ FRE E K
Sbjct: 4 IFLIGYMGSGKTTLGKAFAKAAGLEFIDLDWYIEERLHKT-ISKIFAEQGESGFREVERK 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L + ++A GGG N +M Q G TVFL+V + L RR+ T PLL
Sbjct: 63 LLHEAGDFEDVLIACGGGTPCFFDNMDYMNQAGDTVFLDVSPEVLFRRLKIAKTKR-PLL 121
Query: 216 DYDSADSYTKAFT-------------ALSALSKERSEAYANADATVSLLN 252
S D AF A LS ER E+ + D +V LL+
Sbjct: 122 AGKS-DQELMAFIIGGLEKRLPFYSRARYCLSGERLESRSQIDESVRLLS 170
>gi|196034912|ref|ZP_03102319.1| shikimate kinase [Bacillus cereus W]
gi|218905371|ref|YP_002453205.1| shikimate kinase [Bacillus cereus AH820]
gi|226729117|sp|B7JMV9.1|AROK_BACC0 RecName: Full=Shikimate kinase; Short=SK
gi|195992451|gb|EDX56412.1| shikimate kinase [Bacillus cereus W]
gi|218538002|gb|ACK90400.1| shikimate kinase [Bacillus cereus AH820]
Length = 165
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELHMDVVDTDQKIEE-NQEKAILDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ GI V+L +A R+ T P
Sbjct: 61 SEMLRSLP-VRNAIITTGGGIIEREENRKWMKENGIVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVTKFESRRAYYE---EAHIHIDTT 148
>gi|416821310|ref|ZP_11894006.1| shikimate kinase II [Escherichia coli O55:H7 str. USDA 5905]
gi|320662557|gb|EFX29946.1| shikimate kinase II [Escherichia coli O55:H7 str. USDA 5905]
Length = 174
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFL+G G GKTTVG L+D+L+ F D+D++++ + T VA+I + A FR E
Sbjct: 3 QPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT-VAEIVEREEWAGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
+ AL+ ++ P V+ATGGG ++ N FM+ GI V+L P+ L R+ A
Sbjct: 62 TAALEAVT-APSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQA 113
>gi|251778427|ref|ZP_04821347.1| shikimate kinase [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243082742|gb|EES48632.1| shikimate kinase [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 165
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 14/149 (9%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+GM G GK+T+GE++S L F D D Y+E+ T ++++F E GE YFR+ ES+
Sbjct: 5 VFLIGMPGCGKSTIGELISKELLLKFIDMDIYIEEKTSKT-ISELF-EQGEDYFRDIESE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
A +++ V+ATGGG V + +N ++ G+ +F++ P++ + I+ + PLL
Sbjct: 63 ACKEIIKYDNVVIATGGGVVKKDINVETLKNNGLVIFIDRPVEKI---ISDIDVSRRPLL 119
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
+ L KER + Y A
Sbjct: 120 --------KNGKERIIGLYKERYDIYKKA 140
>gi|299147084|ref|ZP_07040151.1| shikimate kinase [Bacteroides sp. 3_1_23]
gi|336417390|ref|ZP_08597714.1| shikimate kinase [Bacteroides ovatus 3_8_47FAA]
gi|298514969|gb|EFI38851.1| shikimate kinase [Bacteroides sp. 3_1_23]
gi|335936136|gb|EGM98076.1| shikimate kinase [Bacteroides ovatus 3_8_47FAA]
Length = 175
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + ++ F D D Y+E+ T V ++F E GE FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARYMNIPFIDLDWYIEERFHKT-VGELFIERGETGFRELERN 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
L +++ V++TGGGA N FM R G TVFL V D L RR+ V P+L
Sbjct: 63 MLHEVAEFENVVISTGGGAPCFYDNMDFMNRTGKTVFLEVHPDVLFRRL-RVAKQQRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
D KAF + AL K R+ Y A
Sbjct: 122 Q-GKEDEELKAFI-IQALEK-RAPFYHQA 147
>gi|374856713|dbj|BAL59566.1| 3-dehydroquinate synthase [uncultured candidate division OP1
bacterium]
Length = 582
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 7/153 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++L+G+MGSGK+TVG +L+ L F D D+ + G +++QIF+ GE FR ES
Sbjct: 13 IYLLGVMGSGKSTVGRLLACVLGRDFLDLDEEIVT-RAGCTISQIFEREGEQGFRARESA 71
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+++ VVA GGGAV++ NW +RQ GI+++L + LA+R+ G P+L
Sbjct: 72 VLREVVQRKNSVVALGGGAVLKDENWELVRQTGISIYLKARPEILAQRVE--GDTERPVL 129
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
+ + LS + + R Y A T+
Sbjct: 130 ---VGLTPPQRRQKLSEILERRKARYEQAHYTI 159
>gi|254462192|ref|ZP_05075608.1| shikimate kinase [Rhodobacterales bacterium HTCC2083]
gi|206678781|gb|EDZ43268.1| shikimate kinase [Rhodobacteraceae bacterium HTCC2083]
Length = 180
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 85/155 (54%), Gaps = 10/155 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVGMMG+GKT VG+ L+ LD F DSD + S+A+IF+ GEA+FR E
Sbjct: 7 KTVVLVGMMGAGKTAVGKALAAKLDVPFLDSDFEIVT-AANMSIAEIFERDGEAFFRARE 65
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFP 213
S+ + +L V++TGGGA + N + +G++V LN L L R+ D+ P
Sbjct: 66 SEVIARLLDGAPCVLSTGGGAFLAERNRILISERGVSVCLNAALPLLWSRVR--NKDTRP 123
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + D Y LSAL + R+ Y AD +V
Sbjct: 124 LL--QTPDPYAT----LSALFEARAPIYELADVSV 152
>gi|22124879|ref|NP_668302.1| shikimate kinase II [Yersinia pestis KIM10+]
gi|45440570|ref|NP_992109.1| shikimate kinase [Yersinia pestis biovar Microtus str. 91001]
gi|108808698|ref|YP_652614.1| shikimate kinase [Yersinia pestis Antiqua]
gi|108811043|ref|YP_646810.1| shikimate kinase [Yersinia pestis Nepal516]
gi|145600103|ref|YP_001164179.1| shikimate kinase II [Yersinia pestis Pestoides F]
gi|149364942|ref|ZP_01886977.1| shikimate kinase II [Yersinia pestis CA88-4125]
gi|162418402|ref|YP_001607639.1| shikimate kinase [Yersinia pestis Angola]
gi|165926644|ref|ZP_02222476.1| shikimate kinase 2 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165935849|ref|ZP_02224419.1| shikimate kinase 2 [Yersinia pestis biovar Orientalis str. IP275]
gi|166010990|ref|ZP_02231888.1| shikimate kinase 2 [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213009|ref|ZP_02239044.1| shikimate kinase 2 [Yersinia pestis biovar Antiqua str. B42003004]
gi|167399065|ref|ZP_02304589.1| shikimate kinase 2 [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421580|ref|ZP_02313333.1| shikimate kinase 2 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423841|ref|ZP_02315594.1| shikimate kinase 2 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167468110|ref|ZP_02332814.1| shikimate kinase 2 [Yersinia pestis FV-1]
gi|218930242|ref|YP_002348117.1| shikimate kinase II [Yersinia pestis CO92]
gi|229838820|ref|ZP_04458979.1| shikimate kinase II [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229896030|ref|ZP_04511200.1| shikimate kinase II [Yersinia pestis Pestoides A]
gi|229899388|ref|ZP_04514531.1| shikimate kinase II [Yersinia pestis biovar Orientalis str. India
195]
gi|229901268|ref|ZP_04516390.1| shikimate kinase II [Yersinia pestis Nepal516]
gi|270489457|ref|ZP_06206531.1| shikimate kinase [Yersinia pestis KIM D27]
gi|294504936|ref|YP_003568998.1| shikimate kinase [Yersinia pestis Z176003]
gi|384123404|ref|YP_005506024.1| shikimate kinase [Yersinia pestis D106004]
gi|384127260|ref|YP_005509874.1| shikimate kinase [Yersinia pestis D182038]
gi|384138945|ref|YP_005521647.1| shikimate kinase [Yersinia pestis A1122]
gi|384415894|ref|YP_005625256.1| shikimate kinase [Yersinia pestis biovar Medievalis str. Harbin 35]
gi|420548312|ref|ZP_15046132.1| shikimate kinase 2 [Yersinia pestis PY-01]
gi|420553631|ref|ZP_15050879.1| shikimate kinase 2 [Yersinia pestis PY-02]
gi|420559233|ref|ZP_15055754.1| shikimate kinase 2 [Yersinia pestis PY-03]
gi|420569671|ref|ZP_15065171.1| shikimate kinase 2 [Yersinia pestis PY-05]
gi|420575341|ref|ZP_15070302.1| shikimate kinase 2 [Yersinia pestis PY-06]
gi|420580657|ref|ZP_15075136.1| shikimate kinase 2 [Yersinia pestis PY-07]
gi|420585996|ref|ZP_15079972.1| shikimate kinase 2 [Yersinia pestis PY-08]
gi|420591110|ref|ZP_15084569.1| shikimate kinase 2 [Yersinia pestis PY-09]
gi|420596519|ref|ZP_15089436.1| shikimate kinase 2 [Yersinia pestis PY-10]
gi|420602167|ref|ZP_15094459.1| shikimate kinase 2 [Yersinia pestis PY-11]
gi|420607591|ref|ZP_15099362.1| shikimate kinase 2 [Yersinia pestis PY-12]
gi|420613007|ref|ZP_15104221.1| shikimate kinase 2 [Yersinia pestis PY-13]
gi|420618361|ref|ZP_15108888.1| shikimate kinase family protein [Yersinia pestis PY-14]
gi|420623657|ref|ZP_15113658.1| shikimate kinase 2 [Yersinia pestis PY-15]
gi|420628740|ref|ZP_15118270.1| shikimate kinase 2 [Yersinia pestis PY-16]
gi|420633865|ref|ZP_15122862.1| shikimate kinase 2 [Yersinia pestis PY-19]
gi|420644561|ref|ZP_15132559.1| shikimate kinase 2 [Yersinia pestis PY-29]
gi|420649827|ref|ZP_15137317.1| shikimate kinase 2 [Yersinia pestis PY-32]
gi|420671116|ref|ZP_15156498.1| shikimate kinase family protein [Yersinia pestis PY-45]
gi|420676467|ref|ZP_15161362.1| shikimate kinase 2 [Yersinia pestis PY-46]
gi|420682091|ref|ZP_15166442.1| shikimate kinase 2 [Yersinia pestis PY-47]
gi|420687423|ref|ZP_15171181.1| shikimate kinase 2 [Yersinia pestis PY-48]
gi|420692639|ref|ZP_15175760.1| shikimate kinase 2 [Yersinia pestis PY-52]
gi|420698400|ref|ZP_15180828.1| shikimate kinase 2 [Yersinia pestis PY-53]
gi|420704235|ref|ZP_15185471.1| shikimate kinase family protein [Yersinia pestis PY-54]
gi|420709614|ref|ZP_15190245.1| shikimate kinase 2 [Yersinia pestis PY-55]
gi|420715061|ref|ZP_15195085.1| shikimate kinase 2 [Yersinia pestis PY-56]
gi|420720570|ref|ZP_15199811.1| shikimate kinase 2 [Yersinia pestis PY-58]
gi|420726044|ref|ZP_15204626.1| shikimate kinase 2 [Yersinia pestis PY-59]
gi|420731637|ref|ZP_15209653.1| shikimate kinase 2 [Yersinia pestis PY-60]
gi|420736648|ref|ZP_15214178.1| shikimate kinase 2 [Yersinia pestis PY-61]
gi|420742122|ref|ZP_15219098.1| shikimate kinase 2 [Yersinia pestis PY-63]
gi|420747848|ref|ZP_15223940.1| shikimate kinase 2 [Yersinia pestis PY-64]
gi|420753278|ref|ZP_15228788.1| shikimate kinase 2 [Yersinia pestis PY-65]
gi|420759065|ref|ZP_15233446.1| shikimate kinase 2 [Yersinia pestis PY-66]
gi|420764332|ref|ZP_15238069.1| shikimate kinase 2 [Yersinia pestis PY-71]
gi|420769559|ref|ZP_15242758.1| shikimate kinase 2 [Yersinia pestis PY-72]
gi|420774540|ref|ZP_15247268.1| shikimate kinase 2 [Yersinia pestis PY-76]
gi|420780156|ref|ZP_15252211.1| shikimate kinase 2 [Yersinia pestis PY-88]
gi|420785752|ref|ZP_15257103.1| shikimate kinase 2 [Yersinia pestis PY-89]
gi|420790895|ref|ZP_15261723.1| shikimate kinase family protein [Yersinia pestis PY-90]
gi|420796418|ref|ZP_15266687.1| shikimate kinase 2 [Yersinia pestis PY-91]
gi|420801481|ref|ZP_15271237.1| shikimate kinase 2 [Yersinia pestis PY-92]
gi|420806833|ref|ZP_15276084.1| shikimate kinase 2 [Yersinia pestis PY-93]
gi|420812201|ref|ZP_15280906.1| shikimate kinase family protein [Yersinia pestis PY-94]
gi|420817696|ref|ZP_15285870.1| shikimate kinase 2 [Yersinia pestis PY-95]
gi|420823018|ref|ZP_15290645.1| shikimate kinase 2 [Yersinia pestis PY-96]
gi|420828097|ref|ZP_15295210.1| shikimate kinase 2 [Yersinia pestis PY-98]
gi|420833794|ref|ZP_15300356.1| shikimate kinase 2 [Yersinia pestis PY-99]
gi|420838651|ref|ZP_15304745.1| shikimate kinase 2 [Yersinia pestis PY-100]
gi|420843843|ref|ZP_15309458.1| shikimate kinase 2 [Yersinia pestis PY-101]
gi|420849504|ref|ZP_15314540.1| shikimate kinase 2 [Yersinia pestis PY-102]
gi|420855170|ref|ZP_15319340.1| shikimate kinase 2 [Yersinia pestis PY-103]
gi|420860360|ref|ZP_15323911.1| shikimate kinase 2 [Yersinia pestis PY-113]
gi|421764715|ref|ZP_16201503.1| shikimate kinase II [Yersinia pestis INS]
gi|30172911|sp|Q8ZC15.1|AROL_YERPE RecName: Full=Shikimate kinase 2; Short=SK 2
gi|123245614|sp|Q1C4F3.1|AROL_YERPA RecName: Full=Shikimate kinase 2; Short=SK 2
gi|123246679|sp|Q1CLC0.1|AROL_YERPN RecName: Full=Shikimate kinase 2; Short=SK 2
gi|166988293|sp|A4TPJ4.1|AROL_YERPP RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729154|sp|A9R2W3.1|AROL_YERPG RecName: Full=Shikimate kinase 2; Short=SK 2
gi|21957712|gb|AAM84553.1|AE013700_9 shikimate kinase II [Yersinia pestis KIM10+]
gi|45435427|gb|AAS60986.1| Shikimate kinase [Yersinia pestis biovar Microtus str. 91001]
gi|108774691|gb|ABG17210.1| shikimate kinase [Yersinia pestis Nepal516]
gi|108780611|gb|ABG14669.1| shikimate kinase [Yersinia pestis Antiqua]
gi|115348853|emb|CAL21809.1| shikimate kinase II [Yersinia pestis CO92]
gi|145211799|gb|ABP41206.1| shikimate kinase [Yersinia pestis Pestoides F]
gi|149291355|gb|EDM41429.1| shikimate kinase II [Yersinia pestis CA88-4125]
gi|162351217|gb|ABX85165.1| shikimate kinase 2 [Yersinia pestis Angola]
gi|165915994|gb|EDR34601.1| shikimate kinase 2 [Yersinia pestis biovar Orientalis str. IP275]
gi|165921572|gb|EDR38769.1| shikimate kinase 2 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989990|gb|EDR42291.1| shikimate kinase 2 [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205796|gb|EDR50276.1| shikimate kinase 2 [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960499|gb|EDR56520.1| shikimate kinase 2 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051569|gb|EDR62977.1| shikimate kinase 2 [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167058011|gb|EDR67757.1| shikimate kinase 2 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229681197|gb|EEO77291.1| shikimate kinase II [Yersinia pestis Nepal516]
gi|229687790|gb|EEO79863.1| shikimate kinase II [Yersinia pestis biovar Orientalis str. India
195]
gi|229695186|gb|EEO85233.1| shikimate kinase II [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229700953|gb|EEO88982.1| shikimate kinase II [Yersinia pestis Pestoides A]
gi|262363000|gb|ACY59721.1| shikimate kinase II [Yersinia pestis D106004]
gi|262366924|gb|ACY63481.1| shikimate kinase II [Yersinia pestis D182038]
gi|270337961|gb|EFA48738.1| shikimate kinase [Yersinia pestis KIM D27]
gi|294355395|gb|ADE65736.1| shikimate kinase II [Yersinia pestis Z176003]
gi|320016398|gb|ADV99969.1| shikimate kinase II [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|342854074|gb|AEL72627.1| shikimate kinase II [Yersinia pestis A1122]
gi|391423304|gb|EIQ85803.1| shikimate kinase 2 [Yersinia pestis PY-01]
gi|391423642|gb|EIQ86108.1| shikimate kinase 2 [Yersinia pestis PY-02]
gi|391423788|gb|EIQ86236.1| shikimate kinase 2 [Yersinia pestis PY-03]
gi|391439410|gb|EIR00070.1| shikimate kinase 2 [Yersinia pestis PY-05]
gi|391443084|gb|EIR03432.1| shikimate kinase 2 [Yersinia pestis PY-06]
gi|391455205|gb|EIR14344.1| shikimate kinase 2 [Yersinia pestis PY-07]
gi|391456056|gb|EIR15116.1| shikimate kinase 2 [Yersinia pestis PY-08]
gi|391457945|gb|EIR16847.1| shikimate kinase 2 [Yersinia pestis PY-09]
gi|391470973|gb|EIR28577.1| shikimate kinase 2 [Yersinia pestis PY-10]
gi|391472354|gb|EIR29821.1| shikimate kinase 2 [Yersinia pestis PY-11]
gi|391473308|gb|EIR30696.1| shikimate kinase 2 [Yersinia pestis PY-12]
gi|391487075|gb|EIR43051.1| shikimate kinase 2 [Yersinia pestis PY-13]
gi|391488583|gb|EIR44410.1| shikimate kinase 2 [Yersinia pestis PY-15]
gi|391488878|gb|EIR44676.1| shikimate kinase family protein [Yersinia pestis PY-14]
gi|391503011|gb|EIR57248.1| shikimate kinase 2 [Yersinia pestis PY-16]
gi|391503183|gb|EIR57397.1| shikimate kinase 2 [Yersinia pestis PY-19]
gi|391519005|gb|EIR71677.1| shikimate kinase 2 [Yersinia pestis PY-29]
gi|391521510|gb|EIR73972.1| shikimate kinase 2 [Yersinia pestis PY-32]
gi|391538943|gb|EIR89700.1| shikimate kinase family protein [Yersinia pestis PY-45]
gi|391551924|gb|EIS01389.1| shikimate kinase 2 [Yersinia pestis PY-46]
gi|391552154|gb|EIS01603.1| shikimate kinase 2 [Yersinia pestis PY-47]
gi|391552625|gb|EIS02034.1| shikimate kinase 2 [Yersinia pestis PY-48]
gi|391566819|gb|EIS14761.1| shikimate kinase 2 [Yersinia pestis PY-52]
gi|391568030|gb|EIS15814.1| shikimate kinase 2 [Yersinia pestis PY-53]
gi|391572661|gb|EIS19861.1| shikimate kinase family protein [Yersinia pestis PY-54]
gi|391581270|gb|EIS27172.1| shikimate kinase 2 [Yersinia pestis PY-55]
gi|391583454|gb|EIS29110.1| shikimate kinase 2 [Yersinia pestis PY-56]
gi|391594008|gb|EIS38225.1| shikimate kinase 2 [Yersinia pestis PY-58]
gi|391596949|gb|EIS40822.1| shikimate kinase 2 [Yersinia pestis PY-60]
gi|391598112|gb|EIS41872.1| shikimate kinase 2 [Yersinia pestis PY-59]
gi|391611320|gb|EIS53509.1| shikimate kinase 2 [Yersinia pestis PY-61]
gi|391611890|gb|EIS54021.1| shikimate kinase 2 [Yersinia pestis PY-63]
gi|391614724|gb|EIS56561.1| shikimate kinase 2 [Yersinia pestis PY-64]
gi|391624518|gb|EIS65141.1| shikimate kinase 2 [Yersinia pestis PY-65]
gi|391629144|gb|EIS69112.1| shikimate kinase 2 [Yersinia pestis PY-66]
gi|391635251|gb|EIS74437.1| shikimate kinase 2 [Yersinia pestis PY-71]
gi|391637248|gb|EIS76191.1| shikimate kinase 2 [Yersinia pestis PY-72]
gi|391647257|gb|EIS84907.1| shikimate kinase 2 [Yersinia pestis PY-76]
gi|391650816|gb|EIS88062.1| shikimate kinase 2 [Yersinia pestis PY-88]
gi|391655305|gb|EIS92058.1| shikimate kinase 2 [Yersinia pestis PY-89]
gi|391660109|gb|EIS96298.1| shikimate kinase family protein [Yersinia pestis PY-90]
gi|391667671|gb|EIT02971.1| shikimate kinase 2 [Yersinia pestis PY-91]
gi|391677158|gb|EIT11487.1| shikimate kinase 2 [Yersinia pestis PY-93]
gi|391677996|gb|EIT12256.1| shikimate kinase 2 [Yersinia pestis PY-92]
gi|391678479|gb|EIT12688.1| shikimate kinase family protein [Yersinia pestis PY-94]
gi|391691125|gb|EIT24076.1| shikimate kinase 2 [Yersinia pestis PY-95]
gi|391694130|gb|EIT26822.1| shikimate kinase 2 [Yersinia pestis PY-96]
gi|391695748|gb|EIT28294.1| shikimate kinase 2 [Yersinia pestis PY-98]
gi|391708010|gb|EIT39303.1| shikimate kinase 2 [Yersinia pestis PY-99]
gi|391711391|gb|EIT42360.1| shikimate kinase 2 [Yersinia pestis PY-100]
gi|391712291|gb|EIT43185.1| shikimate kinase 2 [Yersinia pestis PY-101]
gi|391724128|gb|EIT53736.1| shikimate kinase 2 [Yersinia pestis PY-102]
gi|391724924|gb|EIT54447.1| shikimate kinase 2 [Yersinia pestis PY-103]
gi|391727539|gb|EIT56742.1| shikimate kinase 2 [Yersinia pestis PY-113]
gi|411174266|gb|EKS44299.1| shikimate kinase II [Yersinia pestis INS]
Length = 174
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G+GKTT+G+ L+ AL Y F D+D ++++ +VA++ + G FR E
Sbjct: 3 QTIFMVGARGAGKTTIGKALAQALGYRFVDTDLFMQQ-TSQMTVAEVVESEGWDGFRLRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIA 205
S ALQ ++ P+ VVATGGGAV+ N FMR G ++L LA+R+A
Sbjct: 62 SMALQAVT-APKTVVATGGGAVLSSENRAFMRDHGRVIYLRASAAVLAKRLA 112
>gi|325917273|ref|ZP_08179494.1| shikimate kinase [Xanthomonas vesicatoria ATCC 35937]
gi|325536493|gb|EGD08268.1| shikimate kinase [Xanthomonas vesicatoria ATCC 35937]
Length = 180
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 98/170 (57%), Gaps = 16/170 (9%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDK-YVEKLMGGTSVAQIFKESGEAYFREYES 155
L +VG MG+GK+ +G L++ F D D+ VE++ G+S+ IF++ GEA FR++E
Sbjct: 7 LVMVGPMGAGKSCIGRRLAERFGLEFVDVDQAIVEQV--GSSIPAIFEQHGEARFRQHEV 64
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPL 214
+ LQ L ++++TGGGAV+ PLN + +R +G V+L+V + A R+A + PL
Sbjct: 65 QTLQTLLEQDNKLISTGGGAVLDPLNRQRIRARGFVVYLHVSVPAQLTRLAR--DRNRPL 122
Query: 215 LD--------YDSADSYTKAFTALSALSKERSEAYANADATVSL-LNLAA 255
L + A T + ++ LS E ++ ++ A+AT L L LAA
Sbjct: 123 LQRADREQVLHAMAAQRTPLYQEVADLSLE-TDHFSPAEATAQLVLRLAA 171
>gi|372276368|ref|ZP_09512404.1| shikimate kinase [Pantoea sp. SL1_M5]
gi|390435652|ref|ZP_10224190.1| shikimate kinase [Pantoea agglomerans IG1]
Length = 174
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G G GKTTVGE LS AL Y F D+D ++ +L SV +I E G FR E++
Sbjct: 5 IFLIGARGCGKTTVGEALSRALGYAFTDTDHHL-QLSTQRSVTEIVAEEGWEGFRARETE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRI 204
+L+ ++ P V+ATGGG ++ N RFM+ QG ++L+ + LA R+
Sbjct: 64 SLKAVT-APGTVIATGGGMILAEENCRFMQEQGQVIWLSASPEVLAERL 111
>gi|332305112|ref|YP_004432963.1| shikimate kinase [Glaciecola sp. 4H-3-7+YE-5]
gi|332172441|gb|AEE21695.1| Shikimate kinase [Glaciecola sp. 4H-3-7+YE-5]
Length = 171
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 81/150 (54%), Gaps = 12/150 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G MG+GK+T+G L+D L F DSD+ +EK G +A IF GE FR E
Sbjct: 7 IFLIGPMGAGKSTIGRHLADELHLEFYDSDQEIEKRTGA-DIAWIFDLEGEEGFRAREET 65
Query: 157 ALQKLSLVPQQVVATGGGAVV-RPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS-FPL 214
+ L+ V+ATGGG+VV + + R +GI V+L +D +++A D PL
Sbjct: 66 VINDLTDKQGIVLATGGGSVVSKAVRNRLSARGIVVYLQTTID---KQVARTQRDKRRPL 122
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYANA 244
L D + T L L++ER+ Y +A
Sbjct: 123 LQKDDPE------TVLRKLAEERNPMYEDA 146
>gi|237720430|ref|ZP_04550911.1| shikimate kinase [Bacteroides sp. 2_2_4]
gi|293370428|ref|ZP_06616981.1| shikimate kinase [Bacteroides ovatus SD CMC 3f]
gi|229450181|gb|EEO55972.1| shikimate kinase [Bacteroides sp. 2_2_4]
gi|292634420|gb|EFF52956.1| shikimate kinase [Bacteroides ovatus SD CMC 3f]
Length = 175
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + ++ F D D Y+E+ T V ++F E GE FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARQMNIPFIDLDWYIEERFHKT-VGELFIERGETGFRELERN 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
L +++ V++TGGGA N FM R G TVFL V D L RR+ V P+L
Sbjct: 63 MLHEVAEFENVVISTGGGAPCFYDNMDFMNRTGKTVFLEVHPDVLFRRL-RVAKQQRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
D KAF + AL K R+ Y A
Sbjct: 122 Q-GKEDEELKAFI-VQALEK-RAPFYHQA 147
>gi|440757999|ref|ZP_20937178.1| Shikimate kinase III [Pantoea agglomerans 299R]
gi|436428248|gb|ELP25906.1| Shikimate kinase III [Pantoea agglomerans 299R]
Length = 174
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G G GKTTVGE LS AL Y F D+D ++ +L SV +I + G FR E++
Sbjct: 5 IFLIGARGCGKTTVGEALSQALGYAFTDTDHHL-QLSTQRSVTEIVEAEGWEGFRARETE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRI 204
+L+ ++ P+ V+ATGGG ++ N RFM+ QG ++L+ + LA R+
Sbjct: 64 SLKAVT-APRTVIATGGGMILAEENCRFMQEQGQVIWLSASPEVLAERL 111
>gi|342218996|ref|ZP_08711593.1| shikimate kinase [Megasphaera sp. UPII 135-E]
gi|341588395|gb|EGS31794.1| shikimate kinase [Megasphaera sp. UPII 135-E]
Length = 171
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 15/154 (9%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GM G GKTT+G +++ + +F D D+++E+ + +F GE YFR++ESK
Sbjct: 5 IILIGMPGVGKTTLGRLVAQQTELSFVDLDEWIEQ-HSHHDIPSLFAR-GETYFRDWESK 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
A Q++S +VATGGG V+R N + R G ++L PL L R + ++ PLL
Sbjct: 63 ACQQVSTYEHTLVATGGGVVLRAQNMTLLQRAGHILWLYRPLYQLMRTLQG---ENRPLL 119
Query: 216 DYDSADSYTKAFTALSALSKERSEAYAN-ADATV 248
+ T L L KER E Y DA +
Sbjct: 120 Q--------GSKTRLRTLYKERYELYRQYGDACI 145
>gi|296314607|ref|ZP_06864548.1| shikimate kinase [Neisseria polysaccharea ATCC 43768]
gi|296838649|gb|EFH22587.1| shikimate kinase [Neisseria polysaccharea ATCC 43768]
Length = 170
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 9/163 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+G+MG+GKTT+G ++ LDY F DSD + G + IF+ GE FR E+
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAA-AAGVPIPTIFEMEGEQGFRSRETA 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+KL ++P V++TGGGAV++ N +R+ G V+L+ + L R + PLL
Sbjct: 67 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAQPETLLERTRC--DSNRPLL 124
Query: 216 DY-DSADSYTKAFTALSALSKERSE---AYANADATV-SLLNL 253
D + +TA L ++ ++ N T+ +LLNL
Sbjct: 125 QVADPLGRLRELYTARDPLYRQTADFTVESGNCRQTIQTLLNL 167
>gi|421890498|ref|ZP_16321356.1| Shikimate kinase (SK) [Ralstonia solanacearum K60-1]
gi|378964108|emb|CCF98104.1| Shikimate kinase (SK) [Ralstonia solanacearum K60-1]
Length = 214
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F VG+MG+GKTTVG ++ LD F DSD +E G V IF+ GE FR+ E++
Sbjct: 30 VFFVGLMGAGKTTVGRAVARRLDLPFFDSDHEIEARCG-VRVPVIFEHEGEMGFRDRETQ 88
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFL 193
+ +L+ V+ATGGGAV+RP N F+R+ G ++L
Sbjct: 89 VIDELTARHGVVLATGGGAVLRPENRAFLRERGTVIYL 126
>gi|88811951|ref|ZP_01127204.1| shikimate kinase I [Nitrococcus mobilis Nb-231]
gi|88790835|gb|EAR21949.1| shikimate kinase I [Nitrococcus mobilis Nb-231]
Length = 174
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +FL+G MG+GK+ VG++L+ L F DSD+ +E+ G +A+IF GE FR E
Sbjct: 5 ERVFLIGPMGAGKSAVGQVLAQRLGRRFLDSDRVLEERTG-VDIARIFDVEGEVGFRARE 63
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLD 198
LQ L+ V+ATGGGAV+R N ++R+ G+TV+L +D
Sbjct: 64 EIVLQDLTRHDGVVLATGGGAVLRERNRVYLRERGLTVYLRTSID 108
>gi|433654887|ref|YP_007298595.1| shikimate kinase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433293076|gb|AGB18898.1| shikimate kinase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 171
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 14/165 (8%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L G M +GK+ VG+ ++D L + + D+D +EK+ G + +IF + GE YFR E A+
Sbjct: 6 LTGFMATGKSVVGKKVADILSFGYIDTDCLIEKICG-MKIPEIFDKYGEKYFRGLEKVAV 64
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLLDY 217
++ S + V++TGGG V+ P N +R+ G+ + L + + R + DS P+L
Sbjct: 65 KRASRLKNHVISTGGGVVLNPSNIVQLRKHGVVICLKARPEIILRNVG--DADSRPILAT 122
Query: 218 DSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDV 262
D D Y + + L ER Y AD T+ + + G+ DV
Sbjct: 123 D--DVYGR----IKMLLDERQHFYEFADYTIDISEM----GINDV 157
>gi|238917252|ref|YP_002930769.1| shikimate kinase [Eubacterium eligens ATCC 27750]
gi|238872612|gb|ACR72322.1| shikimate kinase [Eubacterium eligens ATCC 27750]
Length = 177
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 5/121 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MGSGKTT G +S + F D+D+Y+EK + IF+ESGE FR+ E++
Sbjct: 7 IILIGFMGSGKTTFGRWISMSHSMKFLDTDEYIEKKYNKL-IKDIFRESGEEAFRDMETQ 65
Query: 157 ALQKLS-LVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPL 214
A+++L+ V++ GGG VR +N R +++ G+ V+L +D L +R++ S PL
Sbjct: 66 AVRELADSCDNCVISVGGGLPVRDINRRLLKELGVVVYLEAEVDELVKRLSK--DTSRPL 123
Query: 215 L 215
L
Sbjct: 124 L 124
>gi|357012346|ref|ZP_09077345.1| shikimate kinase [Paenibacillus elgii B69]
Length = 171
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVGMMG+GK++VG+ L+ L++ + D+D +E+ G S+ ++F E GE +FR+ ES+
Sbjct: 6 IVLVGMMGTGKSSVGQALASRLNWVYEDTDAAIERTQG-MSITRMFAELGEPFFRKAESE 64
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
+++ QVVATGGGAV+ N M+ G+ V L + + R+ + S PLL
Sbjct: 65 TIERTLQGRHQVVATGGGAVLAEHNRILMQSSGLVVALKASAETIIERVRS--DQSRPLL 122
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
D + + + R AY AD V
Sbjct: 123 QGGVEDR-------VRHIMESRKHAYDFADLHV 148
>gi|329905847|ref|ZP_08274235.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacteraceae bacterium IMCC9480]
gi|327547487|gb|EGF32303.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacteraceae bacterium IMCC9480]
Length = 568
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 12/149 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G+MGSGKTTVG L+ L+ F DSD +E G S+ IF+ GEA FR+ E++
Sbjct: 5 IFLIGLMGSGKTTVGRALARKLNKRFIDSDHEIEARTG-ASIPVIFEVEGEASFRQREAE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTD-SFPL 214
++ L+ + V+ATGGGA++ P + + +G ++L + ++ R G D + PL
Sbjct: 64 VIKDLTALDDIVLATGGGAILNPASRALLAERGTVIYLRASVSSILHR---TGHDKNRPL 120
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYAN 243
L D + L LS++R YA
Sbjct: 121 L--QGPDPRRR----LEDLSRQREPMYAE 143
>gi|334123228|ref|ZP_08497257.1| shikimate kinase [Enterobacter hormaechei ATCC 49162]
gi|333391102|gb|EGK62225.1| shikimate kinase [Enterobacter hormaechei ATCC 49162]
Length = 174
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 82/151 (54%), Gaps = 15/151 (9%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG G GKTTVG L+ F D+D ++++ G ++A I + G FR E+
Sbjct: 5 IFLVGPRGCGKTTVGLALARLCQSQFVDTDHWLQE-NAGQTIADIVENEGWESFRARETA 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+ ++ VP V+ATGGG ++ P N +FMR+ G+ ++L P+ L R+ ++FP
Sbjct: 64 TLEAVT-VPSTVIATGGGIILAPYNRQFMREKGVVIYLCAPVSTLVGRL-----EAFP-- 115
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADA 246
+ A TA LS+E S+ A DA
Sbjct: 116 ----EEGQRPALTA-KPLSEEVSDVLAERDA 141
>gi|383754855|ref|YP_005433758.1| putative shikimate kinase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381366907|dbj|BAL83735.1| putative shikimate kinase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 176
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 7/159 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKT+ G++L+ L F D D +E+ G ++ +IF + GE +FR+ E
Sbjct: 4 VILIGFMGTGKTSTGKMLAQKLGCAFIDMDVKIEE-EAGMTIPEIFAKFGEDHFRQLEHD 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVF-LNVPLDALARRIAAVGTDSFPLL 215
+L V++TGGG V P N ++QG TV L +D + R GT P+L
Sbjct: 63 LAVRLGSRRNAVISTGGGVVKDPANMAALKQGGTVVCLQADVDTVLERTRCRGTR--PVL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLA 254
D + +A T L A ER YA AD V L+
Sbjct: 121 DKEDNGDRRQAVTKLLA---ERESLYAQADFAVDTSELS 156
>gi|261378268|ref|ZP_05982841.1| shikimate kinase [Neisseria cinerea ATCC 14685]
gi|269145357|gb|EEZ71775.1| shikimate kinase [Neisseria cinerea ATCC 14685]
Length = 170
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L L+G+MG+GKTT+G ++ +L+Y F D D V G S+ IF+ GE FR E+
Sbjct: 8 LILIGLMGAGKTTLGRQVARSLNYCFYDCDHEVSA-AAGVSIPTIFEMEGEQGFRLRETA 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+KL ++P V++TGGGAV++ N +R+ G V+L+ + L R + PLL
Sbjct: 67 MLKKLVILPHIVLSTGGGAVLKEENRNLIRKSGTVVYLHAQPETLLERTRC--DSNRPLL 124
Query: 216 DY-DSADSYTKAFTALSALSKERSE---AYANADATV-SLLNL 253
D + +TA L ++ ++ N T+ +LLNL
Sbjct: 125 QVADPLGRLRELYTARDPLYRQTADFTVESGNCRQTIQTLLNL 167
>gi|452963625|gb|EME68687.1| shikimate kinase [Magnetospirillum sp. SO-1]
Length = 191
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 89/194 (45%), Gaps = 22/194 (11%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G+ + LVG+MG+GK+ VG L+ L F DSD E G+S++ F GEA FR+
Sbjct: 17 GRTVVLVGLMGAGKSCVGRRLAARLGLDFLDSDVEFEA-ASGSSISDYFARFGEAAFRDG 75
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNW-RFMRQGITVFLNVPLDALARRIAAVGTDSF 212
E K + +L P V+ATGGGA + P R G +V++ LD L +R VG D
Sbjct: 76 ERKVIARLLDGPPVVLATGGGAFIDPATRERIKSTGTSVWIRAELDLLLKR--TVGRDHR 133
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAM 272
PLL L L + R YA AD V D D P +
Sbjct: 134 PLLKQGDPREI------LGRLMEARYPVYAEADIIV------------DSTDEVPEATVI 175
Query: 273 EVLVQAQKYLNSKR 286
V+ YL+S++
Sbjct: 176 RVMEGLIAYLDSEK 189
>gi|68536109|ref|YP_250814.1| shikimate kinase [Corynebacterium jeikeium K411]
gi|109939718|sp|Q4JVG1.1|AROK_CORJK RecName: Full=Shikimate kinase; Short=SK
gi|68263708|emb|CAI37196.1| aroK [Corynebacterium jeikeium K411]
Length = 185
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
LVG+ GSGKTT+G+ L++AL+ D+D +EK +G T QI E GE FRE E+ +
Sbjct: 7 LVGLPGSGKTTIGKRLANALNLQLVDTDHMLEKKLGKT-CNQIMGELGEPAFREQEAIVV 65
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDY- 217
+ +L +V+ GGGAVV + V+LNV +D RR + G+++ PLL+
Sbjct: 66 AE-ALQTDGIVSLGGGAVVTESTRELLADHTVVYLNVSIDEGVRRTS--GSNTRPLLNVA 122
Query: 218 DSADSYTKAFTALSALSKERSEAYANADA 246
D Y + F SA +E S D
Sbjct: 123 DPRGKYAQLFAQRSAFYEEVSNFMVRCDG 151
>gi|288942751|ref|YP_003444991.1| Shikimate kinase [Allochromatium vinosum DSM 180]
gi|288898123|gb|ADC63959.1| Shikimate kinase [Allochromatium vinosum DSM 180]
Length = 174
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 68/104 (65%), Gaps = 2/104 (1%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L Q +F+VG MG+GK+TVG L++AL YTF DSD +++ G + IF+ GE+ FR
Sbjct: 2 LRAQNIFIVGPMGAGKSTVGRQLAEALSYTFKDSDHEIQRRT-GVDIPTIFEFEGESGFR 60
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLN 194
E + +++L + V+ATGGGAV+ P N + + +G+ ++L+
Sbjct: 61 ARERQVIEELVAEERIVLATGGGAVLNPENRQDLSARGVVIYLH 104
>gi|399019199|ref|ZP_10721348.1| 3-dehydroquinate synthase [Herbaspirillum sp. CF444]
gi|398098346|gb|EJL88633.1| 3-dehydroquinate synthase [Herbaspirillum sp. CF444]
Length = 567
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 84/147 (57%), Gaps = 12/147 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG+MG+GKTT+G L+ L+ F DSD +E G S+ IF+ GE FR+ E+
Sbjct: 5 IFLVGLMGAGKTTIGRALAKKLNKRFVDSDHEIESRT-GASIPVIFEIEGEESFRKREAD 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTD-SFPL 214
+++LS V+ATGGGA++R +++Q G ++L ++ + +R G D + PL
Sbjct: 64 VIRELSAQQDIVLATGGGAILRAETRAYLKQRGTVIYLRAGINQILQR---TGRDKNRPL 120
Query: 215 LDYDSADSYTKAFTALSALSKERSEAY 241
L +AD K L LS++R Y
Sbjct: 121 L--QTADPRRK----LEELSRQRDPYY 141
>gi|325837274|ref|ZP_08166352.1| shikimate kinase [Turicibacter sp. HGF1]
gi|325491048|gb|EGC93343.1| shikimate kinase [Turicibacter sp. HGF1]
Length = 167
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 12/150 (8%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GMMGSGKTT+G+ L+ L ++ D+D+Y+E+ S++ +F+ GE+YFR+ E
Sbjct: 2 KSIILIGMMGSGKTTIGQALAADLSKSWVDTDQYIEE-KEQQSISYLFEHHGESYFRDCE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITV-FLNVPLDALARRIAAVGTDSFP 213
+ AL +L L +++TGGG +V N ++ TV +L + L RI P
Sbjct: 61 THALSEL-LSHVDIISTGGGIIVTEANRHLIQNEATVIYLKAEIKTLIHRINPTNR---P 116
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYAN 243
LL + T L L K+R + Y +
Sbjct: 117 LLQDEDIQ------TKLETLYKKRHQWYES 140
>gi|325919807|ref|ZP_08181800.1| shikimate kinase [Xanthomonas gardneri ATCC 19865]
gi|325549721|gb|EGD20582.1| shikimate kinase [Xanthomonas gardneri ATCC 19865]
Length = 180
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 95/169 (56%), Gaps = 14/169 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L +VG MG+GK+ +G L++ F D D+ + + G S+ IF++ GEA FR++E +
Sbjct: 7 LVMVGPMGAGKSCIGRRLAERFGLEFVDVDQAIVE-QAGKSIPAIFEQHGEARFRQHEVE 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
LQ L ++++TGGGAV+ PLN + +R+ G V+L+V + A R+A + PLL
Sbjct: 66 TLQALLQQDNKLISTGGGAVLDPLNRQRIRERGFVVYLHVSVPAQLTRLAR--DRNRPLL 123
Query: 216 D--------YDSADSYTKAFTALSALSKERSEAYANADATVSL-LNLAA 255
+ A T + ++ LS E ++ ++ A+AT L L LAA
Sbjct: 124 QRADREQVLHAMAAHRTPLYQEVADLSLE-TDLFSPAEATAQLVLRLAA 171
>gi|354593544|ref|ZP_09011587.1| 3-dehydroquinate synthase [Commensalibacter intestini A911]
gi|353672655|gb|EHD14351.1| 3-dehydroquinate synthase [Commensalibacter intestini A911]
Length = 549
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 10/155 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q + L+G+MG+GKTT+G L+ +L F DSD VEK G ++A IF++ GEA FR E
Sbjct: 10 QPITLIGLMGAGKTTIGRKLAHSLSIPFVDSDHEVEK-TAGCTIADIFEQYGEAEFRRVE 68
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+ +++L V+ATGGGA + +++ T++L+ ++ L RI+ P
Sbjct: 69 HEVIRRLIKQAPIVLATGGGAFMHAKTRALLKERTTTIWLHCSVETLLERISH--HTHRP 126
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL +S D LS L R YA AD +
Sbjct: 127 LL--NSGDKR----EILSNLMMTRYPIYAEADLII 155
>gi|319940609|ref|ZP_08014952.1| hypothetical protein HMPREF9464_00171 [Sutterella wadsworthensis
3_1_45B]
gi|319805975|gb|EFW02733.1| hypothetical protein HMPREF9464_00171 [Sutterella wadsworthensis
3_1_45B]
Length = 509
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GM G GKTT+G+ ++ L F D D VE+ +G +S +I++E GE YFR++ES+
Sbjct: 353 IVLIGMPGCGKTTIGKCVAARLLRPFIDLDALVERRVGKSS-ERIYREDGEEYFRDFESE 411
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALA 201
+++LS V++TGGGA +RP N R G +L PLD L+
Sbjct: 412 IIKELSGRHGLVISTGGGACLRPENRMRLALNGTFYWLQRPLDHLS 457
>gi|109896994|ref|YP_660249.1| shikimate kinase I [Pseudoalteromonas atlantica T6c]
gi|410625036|ref|ZP_11335825.1| shikimate kinase [Glaciecola mesophila KMM 241]
gi|122972293|sp|Q15Y43.1|AROK_PSEA6 RecName: Full=Shikimate kinase; Short=SK
gi|109699275|gb|ABG39195.1| shikimate kinase [Pseudoalteromonas atlantica T6c]
gi|410155563|dbj|GAC22594.1| shikimate kinase [Glaciecola mesophila KMM 241]
Length = 171
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 81/150 (54%), Gaps = 12/150 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G MG+GK+T+G L+D L F DSD+ +EK G +A IF GE FR E
Sbjct: 7 IFLIGPMGAGKSTIGRHLADELHLEFYDSDQEIEKRTGA-DIAWIFDLEGEEGFRAREET 65
Query: 157 ALQKLSLVPQQVVATGGGAVV-RPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS-FPL 214
+ L+ V+ATGGG+VV + + R +GI V+L +D +++A D PL
Sbjct: 66 VINDLTDKQGIVLATGGGSVVSKAVRNRLSARGIVVYLQTTID---KQVARTQRDKRRPL 122
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYANA 244
L D + T L L++ER+ Y +A
Sbjct: 123 LQKDDPE------TVLRRLAEERNPMYEDA 146
>gi|170709327|ref|ZP_02899743.1| shikimate kinase [Bacillus anthracis str. A0389]
gi|170125753|gb|EDS94664.1| shikimate kinase [Bacillus anthracis str. A0389]
Length = 170
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ G + IF E GE FREYE
Sbjct: 7 KSIYITGYMGAGKTTIGKALSKELHMDVVDTDQKIEEKQGKV-IRDIFAEEGEMAFREYE 65
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L L V ++ TGGG V R N ++M++ G V+L +A R+ T P
Sbjct: 66 SEMLCSLP-VDNVIITTGGGIVEREENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 122
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 123 LFQKKDIDAFVTKFESRRAYYE---EAHIHIDTT 153
>gi|152980219|ref|YP_001355053.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Janthinobacterium sp. Marseille]
gi|151280296|gb|ABR88706.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Janthinobacterium sp. Marseille]
Length = 577
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 77/122 (63%), Gaps = 3/122 (2%)
Query: 83 AKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIF 142
A G+E + C G +FLVG+MG+GKTTVG L+ L+ F DSD +E+ G T + IF
Sbjct: 12 APGKE-SLCNVGGNIFLVGLMGAGKTTVGRALAKKLNKRFIDSDHEIEERTGAT-IPLIF 69
Query: 143 KESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALA 201
+ GEA FR+ E++ ++ L+ V+ATGGGAV+ + +++ +G ++L ++++
Sbjct: 70 EIEGEASFRQREAEVIRDLTAQQDIVLATGGGAVLNAESRAYLKSRGTVIYLRASVNSIV 129
Query: 202 RR 203
+R
Sbjct: 130 QR 131
>gi|56696518|ref|YP_166875.1| shikimate kinase [Ruegeria pomeroyi DSS-3]
gi|81350011|sp|Q5LSY0.1|AROK_SILPO RecName: Full=Shikimate kinase; Short=SK
gi|56678255|gb|AAV94921.1| shikimate kinase [Ruegeria pomeroyi DSS-3]
Length = 195
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 87/167 (52%), Gaps = 16/167 (9%)
Query: 89 ASCLDG------QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIF 142
A +DG + + +VGMMG+GKT VG L+ L F DSD +E S+ +IF
Sbjct: 9 AKTIDGGAAALHKTVVMVGMMGAGKTAVGRALAQRLGVPFLDSDAEIES-AANMSIPEIF 67
Query: 143 KESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALA 201
+ GEA+FR+ ES+ + +L V++TGGGA + N R + + G++V+L L L
Sbjct: 68 ERDGEAFFRDRESRVIARLLEGAPCVLSTGGGAFLAEANRRMISEHGVSVWLKADLTVLW 127
Query: 202 RRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
R+ D+ PLL +AD L AL + R Y+ AD V
Sbjct: 128 NRVRH--KDTRPLL--RTADPR----ATLRALYEARVPLYSEADLCV 166
>gi|386813869|ref|ZP_10101093.1| shikimate kinase [planctomycete KSU-1]
gi|386403366|dbj|GAB63974.1| shikimate kinase [planctomycete KSU-1]
Length = 182
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G G+GKTT+G IL+ L F D+D+Y+E+ T + IF E GE FR+ E +
Sbjct: 3 IILIGFRGTGKTTIGRILAQRLGKVFIDADEYLEQREKRT-IQNIFAEGGEDLFRDIEVR 61
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRI 204
+++L + ++ATGGG ++R N R + R GI + L ++ + +RI
Sbjct: 62 IIEELCRLNDTIIATGGGVILREENVRRLKRNGIVILLEADVNTIYKRI 110
>gi|260589695|ref|ZP_05855608.1| shikimate kinase [Blautia hansenii DSM 20583]
gi|331083127|ref|ZP_08332244.1| shikimate kinase [Lachnospiraceae bacterium 6_1_63FAA]
gi|260539935|gb|EEX20504.1| shikimate kinase [Blautia hansenii DSM 20583]
gi|330405129|gb|EGG84666.1| shikimate kinase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 173
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 13/163 (7%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L Q L L+G MG+GK+TV LS L+ F + D+ + + G ++ IF+E GEAY
Sbjct: 2 NSLQKQHLILIGFMGTGKSTVARQLSRQLELPFFEMDEMIVQEQG-MEISNIFQEKGEAY 60
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVG 208
FR+ E+ L+KL + +++ GGG ++R N + M++ G + L + + +R+
Sbjct: 61 FRDLETALLKKLLQEEKGILSCGGGIILRDENIQAMKKHGTVILLTAKPETILKRVQH-- 118
Query: 209 TDSFPLLD-YDSADSYTKAFTALSALSKERSEAY-ANADATVS 249
S P+L+ + D TK L KER E Y AD +S
Sbjct: 119 NQSRPVLNGKKNIDDITK-------LMKEREERYHMTADILIS 154
>gi|302392507|ref|YP_003828327.1| shikimate kinase [Acetohalobium arabaticum DSM 5501]
gi|302204584|gb|ADL13262.1| Shikimate kinase [Acetohalobium arabaticum DSM 5501]
Length = 169
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GK+TVG+ LS+ L+ F DSD+ +E+ G ++ IF E GE YFR+ E++
Sbjct: 4 IVLIGFMGTGKSTVGQHLSERLELEFVDSDEVIEE-RAGREISSIFAEYGEEYFRDLETE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFL 193
+ LS + V++TGGG V+R N +R+ T+ L
Sbjct: 63 VITDLSRQQRLVISTGGGVVLRQENIEQLRKKGTIIL 99
>gi|149202770|ref|ZP_01879742.1| shikimate kinase [Roseovarius sp. TM1035]
gi|149144052|gb|EDM32086.1| shikimate kinase [Roseovarius sp. TM1035]
Length = 193
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 76/123 (61%), Gaps = 4/123 (3%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G+ + LVGMMG+GKT VG+ L+ + F DSD +EK ++++IF+ GE +FR
Sbjct: 17 GKTVVLVGMMGAGKTAVGKALAARIGVPFLDSDAEIEK-AANMAISEIFQRDGETFFRAR 75
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSF 212
E++ + +L P+ +++TGGGA + N + R+G++V+L+ L L R+ G ++
Sbjct: 76 ETEVIDRLLDGPRAILSTGGGAFLAERNRDLVARKGVSVWLDADLPLLWSRVK--GKNTR 133
Query: 213 PLL 215
PLL
Sbjct: 134 PLL 136
>gi|153807316|ref|ZP_01959984.1| hypothetical protein BACCAC_01594 [Bacteroides caccae ATCC 43185]
gi|423220461|ref|ZP_17206956.1| shikimate kinase [Bacteroides caccae CL03T12C61]
gi|149130436|gb|EDM21646.1| shikimate kinase [Bacteroides caccae ATCC 43185]
gi|392623538|gb|EIY17641.1| shikimate kinase [Bacteroides caccae CL03T12C61]
Length = 175
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + ++ F D D Y+E+ T V ++F E GE FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARKMNVPFVDLDWYIEERFHKT-VGELFTERGETGFRELERN 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
L +++ V++TGGGA N FM R G TVFL+V D L RR+ + P+L
Sbjct: 63 MLHEVAEFENVVISTGGGAPCFFDNMEFMNRVGKTVFLDVHPDVLFRRL-RIAKQQRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
D KAF + AL ++R+ Y A
Sbjct: 122 Q-GKEDDELKAFI-IRAL-EQRAPFYTQA 147
>gi|51595261|ref|YP_069452.1| shikimate kinase [Yersinia pseudotuberculosis IP 32953]
gi|153947050|ref|YP_001402103.1| shikimate kinase [Yersinia pseudotuberculosis IP 31758]
gi|170025499|ref|YP_001722004.1| shikimate kinase [Yersinia pseudotuberculosis YPIII]
gi|186894278|ref|YP_001871390.1| shikimate kinase [Yersinia pseudotuberculosis PB1/+]
gi|81640236|sp|Q66DY2.1|AROL_YERPS RecName: Full=Shikimate kinase 2; Short=SK 2
gi|166988292|sp|A7FLH5.1|AROL_YERP3 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729153|sp|B2K6Q9.1|AROL_YERPB RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729155|sp|B1JIG7.1|AROL_YERPY RecName: Full=Shikimate kinase 2; Short=SK 2
gi|51588543|emb|CAH20151.1| shikimate kinase II [Yersinia pseudotuberculosis IP 32953]
gi|152958545|gb|ABS46006.1| shikimate kinase 2 [Yersinia pseudotuberculosis IP 31758]
gi|169752033|gb|ACA69551.1| Shikimate kinase [Yersinia pseudotuberculosis YPIII]
gi|186697304|gb|ACC87933.1| shikimate kinase [Yersinia pseudotuberculosis PB1/+]
Length = 174
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G+GKTT+G+ L+ AL Y F D+D ++++ +VA++ + G FR E
Sbjct: 3 QTIFMVGARGAGKTTIGKALAQALGYRFVDTDLFMQQ-TSQMTVAEVVESEGWDGFRLRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIA 205
S ALQ ++ P+ V+ATGGGAV+ N FMR G ++L LA+R+A
Sbjct: 62 SMALQAVT-APKTVIATGGGAVLSSENRAFMRDHGRVIYLRASAAVLAKRLA 112
>gi|405380996|ref|ZP_11034829.1| shikimate kinase [Rhizobium sp. CF142]
gi|397322464|gb|EJJ26869.1| shikimate kinase [Rhizobium sp. CF142]
Length = 196
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 10/160 (6%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L + L LVG+MG+GK++VG +L+ L F DSD +E++ ++ ++F GE
Sbjct: 18 AALGSRNLILVGLMGAGKSSVGRLLAQQLGVPFIDSDIEIERV-SRMTITELFAAYGEEE 76
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVG 208
FR E++ +++L +VV+TGGGA + R +++ G++V+L LD L R+
Sbjct: 77 FRALEARVMKRLLKGGPRVVSTGGGAFINARTRRHIKKGGLSVWLKADLDVLWDRVNK-- 134
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
D+ PLL ++ L L R YA AD TV
Sbjct: 135 RDTRPLLKTENPKQ------TLENLMNARYPVYAEADLTV 168
>gi|171915132|ref|ZP_02930602.1| shikimate kinase [Verrucomicrobium spinosum DSM 4136]
Length = 471
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 89/159 (55%), Gaps = 12/159 (7%)
Query: 70 TFCDSLDG-----KWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFAD 124
++ D+LD +L G V S G+ + +VG+MGSGK+TVG + + +L + F D
Sbjct: 272 SYFDALDHDAALVPSILTELGLPVTSTRRGRNIIIVGLMGSGKSTVGRMAAHSLGFGFVD 331
Query: 125 SDK-YVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWR 183
+D+ +EK ++ IF GEA FR E++AL+ L V+ATGGG V +P N
Sbjct: 332 TDQIIIEKAR--KTIPDIFAAEGEAGFRYRETEALKSLLGKEGLVIATGGGIVTQPANLP 389
Query: 184 FMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL-DYDSA 220
++Q G V+LN + L +R V ++ PLL ++D A
Sbjct: 390 ILKQLGYVVWLNADPNTLYQR--TVHSNDRPLLRNHDPA 426
>gi|126726513|ref|ZP_01742354.1| shikimate kinase [Rhodobacterales bacterium HTCC2150]
gi|126704376|gb|EBA03468.1| shikimate kinase [Rhodobacteraceae bacterium HTCC2150]
Length = 184
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 83/155 (53%), Gaps = 10/155 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVGMMGSGK+ +G LS +D F D D+ +E T +A+IF GEA+FR+ E
Sbjct: 10 KTVVLVGMMGSGKSAIGSALSQVIDVPFNDLDREIETAAQAT-IAEIFTRDGEAFFRKRE 68
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFP 213
+ L+++ V++TGGGA + N + + QG +V L +D L R+ T P
Sbjct: 69 HQVLERMLKGTPSVLSTGGGAFMAQNNRKLIGTQGFSVCLGADVDLLWSRVRHKTTR--P 126
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL +AD L+ + ER+ YA AD V
Sbjct: 127 LL--QTADP----LATLTEIYNERAATYALADIVV 155
>gi|119384027|ref|YP_915083.1| shikimate kinase [Paracoccus denitrificans PD1222]
gi|119373794|gb|ABL69387.1| shikimate kinase [Paracoccus denitrificans PD1222]
Length = 178
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GMMG+GKT +G L+ L F+D+D +E+ ++ +IF GE +FR ES+
Sbjct: 5 IVLIGMMGAGKTAIGGELARRLRRPFSDTDAEIER-AAAMTIPEIFARDGEEFFRARESE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNW-RFMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
L ++ VV+TGGGA +RP N R G++V+L+ L+ L R+ T PLL
Sbjct: 64 VLGRVLASGPGVVSTGGGAWLRPENRARIGEDGVSVWLDCDLETLWHRVRHRPT--RPLL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVS 249
L L ERS YA AD V
Sbjct: 122 QTPDPRG------TLERLLDERSPVYALADIRVP 149
>gi|417450948|ref|ZP_12162978.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|353636750|gb|EHC82738.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
Length = 199
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+LVG G GKTT+G L+ A + FAD+D++++ + SVA I ++ G FR E
Sbjct: 3 QPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV-QMSVADIVEKEGWGGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
+ AL+ +S P VVATGGG ++ N R+M R G+ ++L P+ L R+ A
Sbjct: 62 TAALEAVS-APSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVNRLEA 113
>gi|160883941|ref|ZP_02064944.1| hypothetical protein BACOVA_01915 [Bacteroides ovatus ATCC 8483]
gi|383111064|ref|ZP_09931882.1| shikimate kinase [Bacteroides sp. D2]
gi|423290636|ref|ZP_17269485.1| shikimate kinase [Bacteroides ovatus CL02T12C04]
gi|423294098|ref|ZP_17272225.1| shikimate kinase [Bacteroides ovatus CL03T12C18]
gi|156110671|gb|EDO12416.1| shikimate kinase [Bacteroides ovatus ATCC 8483]
gi|313694634|gb|EFS31469.1| shikimate kinase [Bacteroides sp. D2]
gi|392665289|gb|EIY58817.1| shikimate kinase [Bacteroides ovatus CL02T12C04]
gi|392676594|gb|EIY70025.1| shikimate kinase [Bacteroides ovatus CL03T12C18]
Length = 175
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + ++ F D D Y+E+ T V ++F E GE FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARYMNIPFIDLDWYIEERFHKT-VGELFIERGETGFRELERN 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
L +++ V++TGGGA N FM R G TVFL V D L RR+ V P+L
Sbjct: 63 MLHEVAEFENVVISTGGGAPCFYDNMDFMNRTGKTVFLEVHPDVLFRRL-RVAKQQRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
D KAF + AL K R+ Y A
Sbjct: 122 Q-GKEDEELKAFI-VQALEK-RAPFYHQA 147
>gi|218529898|ref|YP_002420714.1| shikimate kinase., 3-dehydroquinate synthase [Methylobacterium
extorquens CM4]
gi|218522201|gb|ACK82786.1| Shikimate kinase., 3-dehydroquinate synthase [Methylobacterium
extorquens CM4]
Length = 579
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L + + LVG+MG+GK+TVG L+ L F D+D +E ++A IF GEA FR
Sbjct: 23 LGARSIVLVGLMGAGKSTVGRRLAGRLGLMFKDADHEIEA-AAKLTIADIFSIYGEASFR 81
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQG-ITVFLNVPLDALARRIAAVGTD 210
E E + + +L V+ATGGGA +R + +G I+V+L LD L RR+ +
Sbjct: 82 EGEERVIARLLREGPMVLATGGGAFMREATRARIAEGAISVWLKADLDVLMRRVRK--RN 139
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
+ PLL + ++ + L + R YA AD TV
Sbjct: 140 TRPLLQTEDPEATMR------TLMEVRHPVYAQADVTV 171
>gi|423389446|ref|ZP_17366672.1| shikimate kinase [Bacillus cereus BAG1X1-3]
gi|401641537|gb|EJS59254.1| shikimate kinase [Bacillus cereus BAG1X1-3]
Length = 165
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G++LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKVLSKELHMDVVDTDQKIEE-NQEKAIRDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLRSLP-VQNVIITTGGGIIERAENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVTKFESRRAYYE---EAHIHIDTT 148
>gi|419937167|ref|ZP_14454080.1| shikimate kinase II, partial [Escherichia coli 576-1]
gi|388398204|gb|EIL59134.1| shikimate kinase II, partial [Escherichia coli 576-1]
Length = 149
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFL+G G GKTTVG L+D+L+ F D+D++++ + T VA+I + A FR E
Sbjct: 3 QPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT-VAEIVEREEWAGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
+ AL+ ++ P V+ATGGG ++ N FM+ GI V+L P+ L R+ A
Sbjct: 62 TAALEAVT-APSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQA 113
>gi|291612585|ref|YP_003522742.1| 3-dehydroquinate synthase [Sideroxydans lithotrophicus ES-1]
gi|291582697|gb|ADE10355.1| 3-dehydroquinate synthase [Sideroxydans lithotrophicus ES-1]
Length = 546
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVGMMG+GKTTVG++L+ L TF DSD+ +++ G ++ IF GEA FR ES
Sbjct: 12 IILVGMMGAGKTTVGKLLAKQLGKTFIDSDEEIQRRT-GVTIPHIFDVEGEAGFRVRESG 70
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
+Q+L V+ATGGGA++ N M+Q G+ V+L + L +R
Sbjct: 71 VIQELLKQDDIVLATGGGAILSAQNRPLMKQNGVVVYLKSSVHDLWQR 118
>gi|240138202|ref|YP_002962674.1| bifunctional shikimate kinase (N-terminal) / dehydroquinate
synthase (C-terminal) enzyme [Methylobacterium
extorquens AM1]
gi|418059753|ref|ZP_12697692.1| 3-dehydroquinate synthase [Methylobacterium extorquens DSM 13060]
gi|240008171|gb|ACS39397.1| bifunctional shikimate kinase (N-terminal) / dehydroquinate
synthase (C-terminal) enzyme [Methylobacterium
extorquens AM1]
gi|373566695|gb|EHP92685.1| 3-dehydroquinate synthase [Methylobacterium extorquens DSM 13060]
Length = 579
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L + + LVG+MG+GK+TVG L+ L F D+D +E ++A IF GEA FR
Sbjct: 23 LGARSIVLVGLMGAGKSTVGRRLAGRLGLMFKDADHEIEA-AAKLTIADIFSIYGEASFR 81
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQG-ITVFLNVPLDALARRIAAVGTD 210
E E + + +L V+ATGGGA +R + +G I+V+L LD L RR+ +
Sbjct: 82 EGEERVIARLLREGPMVLATGGGAFMREATRARIAEGAISVWLKADLDVLMRRVRK--RN 139
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
+ PLL + ++ + L + R YA AD TV
Sbjct: 140 TRPLLQTEDPEATMR------TLMEVRHPVYAQADVTV 171
>gi|423604111|ref|ZP_17580004.1| shikimate kinase [Bacillus cereus VD102]
gi|401245797|gb|EJR52150.1| shikimate kinase [Bacillus cereus VD102]
Length = 165
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ + IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELHMDVIDTDQKIEEKQ-EKEIRDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
SK L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SKMLRSLP-VENVIITTGGGIIEREENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVTKFESRRAYYE---EAHIHIDTT 148
>gi|344345393|ref|ZP_08776245.1| Shikimate kinase [Marichromatium purpuratum 984]
gi|343803013|gb|EGV20927.1| Shikimate kinase [Marichromatium purpuratum 984]
Length = 177
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
+ Q +F+VG MG+GK+TVG L++AL YTF DSD+ +++ G + IF+ GEA FR
Sbjct: 2 IRAQNIFIVGPMGAGKSTVGRQLAEALSYTFKDSDQEIQRRT-GVDIPTIFEFEGEAGFR 60
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWR-FMRQGITVFLNVPLDALARRIAAVGTD 210
E + + L + V+ATGGG ++ P N + +G+ ++L+ + R A
Sbjct: 61 ARERQVIIDLIAGERMVLATGGGVIIDPENRQDLAARGVVIYLHCSAEQQHARTAR--DR 118
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYAN-ADATVS 249
+ PLLD + + L L +ER Y AD V+
Sbjct: 119 NRPLLDTE------EPLQRLRELMEEREPLYRQVADMVVT 152
>gi|254560762|ref|YP_003067857.1| bifunctional shikimate kinase/dehydroquinate synthase
[Methylobacterium extorquens DM4]
gi|254268040|emb|CAX23911.1| bifunctional shikimate kinase (N-terminal) / dehydroquinate
synthase (C-terminal) enzyme [Methylobacterium
extorquens DM4]
Length = 579
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L + + LVG+MG+GK+TVG L+ L F D+D +E ++A IF GEA FR
Sbjct: 23 LGARSIVLVGLMGAGKSTVGRRLAGRLGLMFKDADHEIEA-AAKLTIADIFSIYGEASFR 81
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQG-ITVFLNVPLDALARRIAAVGTD 210
E E + + +L V+ATGGGA +R + +G I+V+L LD L RR+ +
Sbjct: 82 EGEERVIARLLREGPMVLATGGGAFMREATRARIAEGAISVWLKADLDVLMRRVRK--RN 139
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
+ PLL + ++ + L + R YA AD TV
Sbjct: 140 TRPLLQTEDPEATMR------TLMEVRHPVYAQADVTV 171
>gi|293376828|ref|ZP_06623047.1| shikimate kinase [Turicibacter sanguinis PC909]
gi|292644522|gb|EFF62613.1| shikimate kinase [Turicibacter sanguinis PC909]
Length = 167
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GMMGSGKTT+G+ L+ L ++ D+D+Y+E+ S+ +F+ GE+YFR+ E
Sbjct: 2 KSIILIGMMGSGKTTIGQALAADLSKSWVDTDQYIEE-KEQQSIPYLFEHHGESYFRDCE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITV-FLNVPLDALARRIAAVGTDSFP 213
+ AL +L L +++TGGG +V N ++ TV +L + L RI P
Sbjct: 61 THALSEL-LSHVDIISTGGGIIVNEANRHLIQNEATVIYLKAEIKTLIHRINPTNR---P 116
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAY 241
LL + T L L K+R + Y
Sbjct: 117 LLQDEDIQ------TKLETLYKKRHQWY 138
>gi|402815909|ref|ZP_10865501.1| putative shikimate kinase [Paenibacillus alvei DSM 29]
gi|402506949|gb|EJW17472.1| putative shikimate kinase [Paenibacillus alvei DSM 29]
Length = 170
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 87/164 (53%), Gaps = 14/164 (8%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q + L+G MG+GK+TVG+ ++ L +FAD D V G S+ +IF GEAYFRE E
Sbjct: 2 QHIILIGFMGTGKSTVGQEVARQLGCSFADLDAAV-VAREGRSIPEIFATDGEAYFRERE 60
Query: 155 SKAL-QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTD-S 211
S+AL L+ + V+ATGGG V+R N MR G V L +A+ +A V D +
Sbjct: 61 SQALADMLNHSTRHVIATGGGIVLREHNRELMRDGGYIVHLAASKEAI---LARVKRDRN 117
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAA 255
PLL D + +K L ++R Y A T++ N A
Sbjct: 118 RPLLQGDMEERVSK-------LIQQREGLYDFAHTTIATDNETA 154
>gi|423417838|ref|ZP_17394927.1| shikimate kinase [Bacillus cereus BAG3X2-1]
gi|401107009|gb|EJQ14966.1| shikimate kinase [Bacillus cereus BAG3X2-1]
Length = 165
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G++LS L D+D+ +E+ + IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKVLSKELHMDVVDTDQKIEEKQEKV-IRDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLRSLP-VQNVIITTGGGIIERAENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVTKFESRRAYYE---EAHIHIDTT 148
>gi|85702958|ref|ZP_01034062.1| shikimate kinase [Roseovarius sp. 217]
gi|85671886|gb|EAQ26743.1| shikimate kinase [Roseovarius sp. 217]
Length = 193
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 76/123 (61%), Gaps = 4/123 (3%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G+ + LVGMMG+GKT VG+ L+ + F DSD +EK ++A+IF+ GEA+FR
Sbjct: 17 GKTVVLVGMMGAGKTAVGKALAAKIGVPFLDSDTEIEK-AANMTIAEIFQRDGEAFFRAR 75
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSF 212
E++ + +L + +++TGGGA + N + R+G++V+L+ L L R+ G ++
Sbjct: 76 ETEVIDRLLDGQRSILSTGGGAFLAERNRALVARKGVSVWLDADLPLLWSRVK--GKNTR 133
Query: 213 PLL 215
PLL
Sbjct: 134 PLL 136
>gi|334131129|ref|ZP_08504895.1| LOW QUALITY PROTEIN: Putative bifunctional protein
[Methyloversatilis universalis FAM5]
gi|333443759|gb|EGK71720.1| LOW QUALITY PROTEIN: Putative bifunctional protein
[Methyloversatilis universalis FAM5]
Length = 175
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVGMMG+GKTTVG L+ L F D D +E G S+ IF+ GEA FR E+
Sbjct: 7 IFLVGMMGAGKTTVGRQLARRLHKRFVDCDHEIEARTG-VSIPTIFEIEGEAGFRRREAA 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
++ L+ V+ATGGGAV+ P + ++ G V+L+VP D L R G + PLL
Sbjct: 66 TIEALAQESGLVLATGGGAVLDPASRAHLKSGGWVVYLDVPPDVLWARTR--GDRNRPLL 123
>gi|409248833|ref|YP_006884671.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|320084661|emb|CBY94452.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 180
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+LVG G GKTT+G L+ A + FAD+D++++ + SVA I ++ G FR E
Sbjct: 2 QPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV-QMSVADIVEKEGWGGFRARE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
+ AL+ +S P VVATGGG ++ N R+M R G+ ++L P+ L R+ A
Sbjct: 61 TAALEAVS-APSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVNRLEA 112
>gi|417405312|ref|ZP_12157761.1| Shikimate kinase 3, partial [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353628345|gb|EHC76432.1| Shikimate kinase 3, partial [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
Length = 173
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+LVG G GKTT+G L+ A + FAD+D++++ + SVA I ++ G FR E
Sbjct: 3 QPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV-QMSVADIVEKEGWGGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
+ AL+ +S P VVATGGG ++ N R+M R G+ ++L P+ L R+ A
Sbjct: 62 TAALEAVS-APSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVNRLEA 113
>gi|225174905|ref|ZP_03728902.1| Shikimate kinase [Dethiobacter alkaliphilus AHT 1]
gi|225169545|gb|EEG78342.1| Shikimate kinase [Dethiobacter alkaliphilus AHT 1]
Length = 171
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 14/154 (9%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
+ G+ L L+G MG+GKT VG +L+D L+ F D+D+ + + G S+ ++F GE YFR
Sbjct: 4 ISGKNLVLIGFMGTGKTEVGRLLADLLNRRFVDTDRRISE-REGMSIPELFAARGEQYFR 62
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTD 210
E + + +L+ VV+TGGG V+ N +R G V+L+ +D L+ R+ G
Sbjct: 63 AAEKEVVAELASQKGLVVSTGGGVVLDGGNVEHLRLSGFVVWLDADVDTLSLRLQ--GDK 120
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANA 244
+ PLL D L+ L K R Y A
Sbjct: 121 TRPLLQSD----------GLAELYKRREALYREA 144
>gi|163851068|ref|YP_001639111.1| shikimate kinase., 3-dehydroquinate synthase [Methylobacterium
extorquens PA1]
gi|163662673|gb|ABY30040.1| Shikimate kinase., 3-dehydroquinate synthase [Methylobacterium
extorquens PA1]
Length = 604
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L + + LVG+MG+GK+TVG L+ L F D+D +E ++A IF GEA FR
Sbjct: 48 LGARSIVLVGLMGAGKSTVGRRLAGRLGLMFKDADHEIEA-AAKLTIADIFSIYGEASFR 106
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQG-ITVFLNVPLDALARRIAAVGTD 210
E E + + +L V+ATGGGA +R + +G I+V+L LD L RR+ +
Sbjct: 107 EGEERVIARLLREGPMVLATGGGAFMREATRARIAEGAISVWLKADLDVLMRRVRK--RN 164
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
+ PLL + ++ + L + R YA AD TV
Sbjct: 165 TRPLLQTEDPEA------TMRTLMEVRHPVYAQADVTV 196
>gi|409395507|ref|ZP_11246577.1| shikimate kinase [Pseudomonas sp. Chol1]
gi|409395605|ref|ZP_11246668.1| shikimate kinase [Pseudomonas sp. Chol1]
gi|409119760|gb|EKM96135.1| shikimate kinase [Pseudomonas sp. Chol1]
gi|409119889|gb|EKM96261.1| shikimate kinase [Pseudomonas sp. Chol1]
Length = 181
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L LVG MG+GK+T+G +L+ L F DSDK +E+ G S+ IF GE FRE E
Sbjct: 2 QNLILVGPMGAGKSTIGRLLAKELRLPFKDSDKEIEQRTG-ASIPLIFDVEGEGGFRERE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQG 188
A+ L ++ V+ATGGGAV+R N R +R G
Sbjct: 61 QAAIADLCMLNGVVLATGGGAVLREDNRRALRSG 94
>gi|226328752|ref|ZP_03804270.1| hypothetical protein PROPEN_02652 [Proteus penneri ATCC 35198]
gi|225201938|gb|EEG84292.1| shikimate kinase [Proteus penneri ATCC 35198]
Length = 176
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 73/111 (65%), Gaps = 3/111 (2%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
++L+G G+GKTTVG+ LS +L+Y F D+D ++ K T ++ + +E G +FR+ ES
Sbjct: 10 TIYLIGPRGAGKTTVGKALSLSLNYRFIDTDYWITKKYQQT-ISSMVEEKGWDFFRQIES 68
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIA 205
+AL ++S P QV++TGGG V+ N +M+ G+T++L L+ L R++
Sbjct: 69 EALIQVSQ-PNQVISTGGGMVLADKNRAYMKTSGVTIYLQASLETLVERLS 118
>gi|147677466|ref|YP_001211681.1| shikimate kinase [Pelotomaculum thermopropionicum SI]
gi|189046334|sp|A5D373.1|AROK_PELTS RecName: Full=Shikimate kinase; Short=SK
gi|146273563|dbj|BAF59312.1| shikimate kinase [Pelotomaculum thermopropionicum SI]
Length = 172
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 79/153 (51%), Gaps = 10/153 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GKT VG L+ L F D+D +EK+ G T VAQIF G+ FR E+
Sbjct: 4 IVLIGFMGTGKTAVGRRLAGRLKREFIDTDAEIEKVTGKT-VAQIFARDGQIRFRSEEAL 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
++KL+ V++TGGG V+ P N R +++ G+ + L + + RR+ + PLL
Sbjct: 63 LVRKLAGKENLVISTGGGMVLNPENVRLLKENGVLIALTADPEVICRRVK--NKKNRPLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
K AL KER Y A+ V
Sbjct: 121 MRGDLRENIK------ALLKEREGVYDVAEHKV 147
>gi|423483821|ref|ZP_17460511.1| shikimate kinase [Bacillus cereus BAG6X1-2]
gi|401141372|gb|EJQ48927.1| shikimate kinase [Bacillus cereus BAG6X1-2]
Length = 165
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 12/159 (7%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELHMDVVDTDQKIEE-QKEKAIRYIFAEEGEMVFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A+R++ T P
Sbjct: 61 SEMLRSLP-VQNVIITTGGGIIEREENRKWMKENGTVVYLYCDPHVIAKRLSKDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
L D++ F + R Y AD + N
Sbjct: 118 LFQKKDIDAFVTKFES-------RRAYYEEADIHIDTTN 149
>gi|423452459|ref|ZP_17429312.1| shikimate kinase [Bacillus cereus BAG5X1-1]
gi|423470453|ref|ZP_17447197.1| shikimate kinase [Bacillus cereus BAG6O-2]
gi|401140097|gb|EJQ47654.1| shikimate kinase [Bacillus cereus BAG5X1-1]
gi|402436582|gb|EJV68612.1| shikimate kinase [Bacillus cereus BAG6O-2]
Length = 165
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELHMEVVDTDQKIEE-QKEKAIRHIFAEEGEMVFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLRSLP-VQNVIITTGGGIIEREENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
L D++ F + A Y AD + N
Sbjct: 118 LFQKKDIDAFVTKFESRRAY-------YEEADIHIDTTN 149
>gi|418869292|ref|ZP_13423728.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|392836440|gb|EJA92022.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
Length = 181
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+LVG G GKTT+G L+ A + FAD+D++++ + SVA I ++ G FR E
Sbjct: 3 QPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV-QMSVADIVEKEGWGGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
+ AL+ +S P VVATGGG ++ N R+M R G+ ++L P+ L R+ A
Sbjct: 62 TAALEAVS-APSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVNRLEA 113
>gi|304316743|ref|YP_003851888.1| shikimate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302778245|gb|ADL68804.1| Shikimate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 171
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L G M +GK+ VG+ ++D L + + D+D +EK+ G + +IF + GE YFR E A+
Sbjct: 6 LTGFMATGKSVVGKKVADILSFGYIDTDCLIEKICG-MKIPEIFDKYGEKYFRGIEKVAV 64
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLLDY 217
++ S + V++TGGG V+ P N +R+ G+ + L + + R + G S P+L
Sbjct: 65 KRASRLKNHVISTGGGVVLNPSNIVQLRKHGVVICLKARPEIILRNVGDAG--SRPILMS 122
Query: 218 DSADSYTKAFTALSALSKERSEAYANADATVSL 250
D D Y + T L ER Y AD T+ +
Sbjct: 123 D--DVYERIKTLLD----ERQHFYEFADYTIDI 149
>gi|213582689|ref|ZP_03364515.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
Length = 127
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+LVG G GKTT+G L+ A + FAD+D++++ + SVA I ++ G FR E
Sbjct: 3 QPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV-QMSVADIVEKEGWGGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
+ AL+ +S P VVATGGG ++ N R+M R G+ ++L P+ L R+ A
Sbjct: 62 TAALEAVS-APSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVNRLEA 113
>gi|296270180|ref|YP_003652812.1| shikimate kinase [Thermobispora bispora DSM 43833]
gi|296092967|gb|ADG88919.1| Shikimate kinase [Thermobispora bispora DSM 43833]
Length = 165
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G + L+G G+GKTTVG IL+D L F D+D VE + G V+ IF E GEA FRE
Sbjct: 2 GSVVVLIGPPGAGKTTVGRILADRLGVPFRDTDADVEA-VAGKPVSDIFIEDGEARFREL 60
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
E++A+++ V++ GGGA++ R + V+L V LD +R+ + P
Sbjct: 61 EAEAVRQALATHDGVLSLGGGAILHEPTQRLLEDHRVVYLEVGLDQAVKRVGL--ATARP 118
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYAN-ADATV 248
LL + L L +ER Y AD TV
Sbjct: 119 LL-------VLNPRSQLRKLMEERRPIYERLADITV 147
>gi|417525545|ref|ZP_12184470.1| Shikimate kinase 3, partial [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|353669906|gb|EHD06676.1| Shikimate kinase 3, partial [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
Length = 175
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+LVG G GKTT+G L+ A + FAD+D++++ + SVA I ++ G FR E
Sbjct: 3 QPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV-QMSVADIVEKEGWGGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
+ AL+ +S P VVATGGG ++ N R+M R G+ ++L P+ L R+ A
Sbjct: 62 TAALEAVS-APSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVNRLEA 113
>gi|218688251|ref|YP_002396463.1| shikimate kinase II [Escherichia coli ED1a]
gi|254806788|sp|B7MPE9.1|AROL_ECO81 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|218425815|emb|CAR06621.1| shikimate kinase II [Escherichia coli ED1a]
Length = 174
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFL+G G GKTTVG L+D+L+ F D+D++++ + T VA I + A FR E
Sbjct: 3 QPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT-VADIVEREEWAGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
+ AL+ ++ P V+ATGGG ++ N FM+ GI V+L P+ L R+ A
Sbjct: 62 TAALEAVT-APSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQA 113
>gi|168240204|ref|ZP_02665136.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168465471|ref|ZP_02699353.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194444401|ref|YP_002039628.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194449032|ref|YP_002044421.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|204926751|ref|ZP_03217953.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|238911479|ref|ZP_04655316.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|375000117|ref|ZP_09724457.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|386590321|ref|YP_006086721.1| Shikimate kinase III [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|417346660|ref|ZP_12126442.1| Shikimate kinase III [Salmonella enterica subsp. enterica serovar
Gaminara str. A4-567]
gi|417355997|ref|ZP_12131663.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
gi|417379068|ref|ZP_12147538.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|417472830|ref|ZP_12168417.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
gi|417503807|ref|ZP_12174055.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|418513804|ref|ZP_13080027.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|418763256|ref|ZP_13319380.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|418766788|ref|ZP_13322860.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|418771961|ref|ZP_13327967.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|418774787|ref|ZP_13330748.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|418781257|ref|ZP_13337142.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|418784721|ref|ZP_13340558.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|418804679|ref|ZP_13360283.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|418807540|ref|ZP_13363098.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418812078|ref|ZP_13367602.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418815437|ref|ZP_13370938.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|418821382|ref|ZP_13376807.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|418825770|ref|ZP_13381038.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|418831715|ref|ZP_13386665.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418835717|ref|ZP_13390608.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418838701|ref|ZP_13393543.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418848904|ref|ZP_13403639.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418853263|ref|ZP_13407956.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|419727548|ref|ZP_14254516.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419733850|ref|ZP_14260745.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419738941|ref|ZP_14265697.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419745624|ref|ZP_14272256.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419749505|ref|ZP_14275984.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|419788982|ref|ZP_14314665.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|419794024|ref|ZP_14319640.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|421572608|ref|ZP_16018254.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421577517|ref|ZP_16023105.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421582104|ref|ZP_16027645.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421584495|ref|ZP_16030003.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|452121349|ref|YP_007471597.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|226729148|sp|B4T8M7.1|AROL_SALHS RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729149|sp|B4SW28.1|AROL_SALNS RecName: Full=Shikimate kinase 2; Short=SK 2
gi|194403064|gb|ACF63286.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194407336|gb|ACF67555.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|195631866|gb|EDX50386.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|204323416|gb|EDZ08611.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205340347|gb|EDZ27111.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|353074805|gb|EHB40565.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|353579128|gb|EHC40762.1| Shikimate kinase III [Salmonella enterica subsp. enterica serovar
Gaminara str. A4-567]
gi|353597441|gb|EHC54168.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
gi|353618527|gb|EHC69181.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353651946|gb|EHC93914.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|353652918|gb|EHC94604.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
gi|366080997|gb|EHN44950.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|381299037|gb|EIC40111.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381300781|gb|EIC41839.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381301130|gb|EIC42186.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381305703|gb|EIC46613.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|381310661|gb|EIC51487.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|383797365|gb|AFH44447.1| Shikimate kinase III [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|392616114|gb|EIW98549.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392616448|gb|EIW98881.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|392733536|gb|EIZ90738.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|392734500|gb|EIZ91682.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|392736799|gb|EIZ93961.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|392747984|gb|EJA04975.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|392749987|gb|EJA06963.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|392754252|gb|EJA11171.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|392769708|gb|EJA26437.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|392776818|gb|EJA33504.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392778803|gb|EJA35474.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392790977|gb|EJA47470.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|392791889|gb|EJA48357.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|392798612|gb|EJA54883.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392802992|gb|EJA59193.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392812005|gb|EJA68002.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|392814527|gb|EJA70478.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392822251|gb|EJA78063.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392827311|gb|EJA83020.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|402515541|gb|EJW22955.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402516105|gb|EJW23518.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402516434|gb|EJW23845.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402531013|gb|EJW38226.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|451910353|gb|AGF82159.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 181
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+LVG G GKTT+G L+ A + FAD+D++++ + SVA I ++ G FR E
Sbjct: 3 QPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV-QMSVADIVEKEGWGGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
+ AL+ +S P VVATGGG ++ N R+M R G+ ++L P+ L R+ A
Sbjct: 62 TAALEAVS-APSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVNRLEA 113
>gi|452822420|gb|EME29439.1| shikimate kinase [Galdieria sulphuraria]
Length = 173
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 102 MMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKL 161
MMGSGK+T+GE+L+ L Y+F D+ + +E+ +++I KE GE RE ES L ++
Sbjct: 1 MMGSGKSTIGELLARKLGYSFLDTVQIIER-ASKKEISEILKEYGEEKLREIESDVLNQV 59
Query: 162 SLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRI 204
VVAT GG V++ NW + GI VFL+ + + RR+
Sbjct: 60 QSYVCCVVATEGGVVLKNSNWAVLHNGIVVFLDAAVPIIFRRL 102
>gi|30264307|ref|NP_846684.1| shikimate kinase [Bacillus anthracis str. Ames]
gi|47529752|ref|YP_021101.1| shikimate kinase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187134|ref|YP_030386.1| shikimate kinase [Bacillus anthracis str. Sterne]
gi|167634679|ref|ZP_02392999.1| shikimate kinase [Bacillus anthracis str. A0442]
gi|167638570|ref|ZP_02396846.1| shikimate kinase [Bacillus anthracis str. A0193]
gi|170687408|ref|ZP_02878625.1| shikimate kinase [Bacillus anthracis str. A0465]
gi|177655893|ref|ZP_02937085.1| shikimate kinase [Bacillus anthracis str. A0174]
gi|190565753|ref|ZP_03018672.1| shikimate kinase [Bacillus anthracis str. Tsiankovskii-I]
gi|227817009|ref|YP_002817018.1| shikimate kinase [Bacillus anthracis str. CDC 684]
gi|229601979|ref|YP_002868526.1| shikimate kinase [Bacillus anthracis str. A0248]
gi|254683995|ref|ZP_05147855.1| shikimate kinase [Bacillus anthracis str. CNEVA-9066]
gi|254721829|ref|ZP_05183618.1| shikimate kinase [Bacillus anthracis str. A1055]
gi|254736343|ref|ZP_05194049.1| shikimate kinase [Bacillus anthracis str. Western North America
USA6153]
gi|254741381|ref|ZP_05199068.1| shikimate kinase [Bacillus anthracis str. Kruger B]
gi|254753984|ref|ZP_05206019.1| shikimate kinase [Bacillus anthracis str. Vollum]
gi|254757855|ref|ZP_05209882.1| shikimate kinase [Bacillus anthracis str. Australia 94]
gi|421506492|ref|ZP_15953415.1| shikimate kinase [Bacillus anthracis str. UR-1]
gi|421638314|ref|ZP_16078910.1| shikimate kinase [Bacillus anthracis str. BF1]
gi|254806764|sp|C3P8E3.1|AROK_BACAA RecName: Full=Shikimate kinase; Short=SK
gi|254806765|sp|C3LKR2.1|AROK_BACAC RecName: Full=Shikimate kinase; Short=SK
gi|30258952|gb|AAP28170.1| shikimate kinase [Bacillus anthracis str. Ames]
gi|47504900|gb|AAT33576.1| shikimate kinase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181061|gb|AAT56437.1| shikimate kinase [Bacillus anthracis str. Sterne]
gi|167513418|gb|EDR88788.1| shikimate kinase [Bacillus anthracis str. A0193]
gi|167530131|gb|EDR92866.1| shikimate kinase [Bacillus anthracis str. A0442]
gi|170668603|gb|EDT19349.1| shikimate kinase [Bacillus anthracis str. A0465]
gi|172079926|gb|EDT65031.1| shikimate kinase [Bacillus anthracis str. A0174]
gi|190562672|gb|EDV16638.1| shikimate kinase [Bacillus anthracis str. Tsiankovskii-I]
gi|227007752|gb|ACP17495.1| shikimate kinase [Bacillus anthracis str. CDC 684]
gi|229266387|gb|ACQ48024.1| shikimate kinase [Bacillus anthracis str. A0248]
gi|401823485|gb|EJT22632.1| shikimate kinase [Bacillus anthracis str. UR-1]
gi|403394740|gb|EJY91980.1| shikimate kinase [Bacillus anthracis str. BF1]
Length = 165
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ G + IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELHMDVVDTDQKIEEKQGKV-IRDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L L V ++ TGGG V R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLCSLP-VDNVIITTGGGIVEREENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVTKFESRRAYYE---EAHIHIDTT 148
>gi|224536692|ref|ZP_03677231.1| hypothetical protein BACCELL_01568 [Bacteroides cellulosilyticus
DSM 14838]
gi|423223447|ref|ZP_17209916.1| shikimate kinase [Bacteroides cellulosilyticus CL02T12C19]
gi|224521783|gb|EEF90888.1| hypothetical protein BACCELL_01568 [Bacteroides cellulosilyticus
DSM 14838]
gi|392638709|gb|EIY32544.1| shikimate kinase [Bacteroides cellulosilyticus CL02T12C19]
Length = 175
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + L+ F D D Y+E+ + S+ ++F E GEA FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARELNIPFIDLDWYIEERL-HKSIRELFIERGEASFRELERT 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L +++ +++TGGG N +M + G TVFL+V D L RR+ V T P+L
Sbjct: 63 MLHEVAEFENVIISTGGGTPCFFDNMEYMNEHGQTVFLDVHPDVLFRRL-RVATQQRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
D + F + AL K R+ Y A
Sbjct: 122 Q-GKTDEELRIFI-IEALEK-RAPHYGKA 147
>gi|82775712|ref|YP_402059.1| shikimate kinase [Shigella dysenteriae Sd197]
gi|108935820|sp|Q32JD7.3|AROL_SHIDS RecName: Full=Shikimate kinase 2; Short=SK 2
gi|81239860|gb|ABB60570.1| shikimate kinase II [Shigella dysenteriae Sd197]
Length = 174
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFL+G G GKTTVG L+D L+ F D+D++++ + T VA+I + A FR E
Sbjct: 3 QPLFLIGPRGCGKTTVGMALADLLNRRFVDTDQWLQSQLNMT-VAEIVEREEWAGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
+ AL+ ++ P V+ATGGG ++ N FM+ GI V+L P+ L R+ A
Sbjct: 62 TAALEAVT-APSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQA 113
>gi|16759366|ref|NP_454983.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|16763768|ref|NP_459383.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|29142862|ref|NP_806204.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|56414457|ref|YP_151532.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|161615431|ref|YP_001589396.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|167992231|ref|ZP_02573329.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168232355|ref|ZP_02657413.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168261185|ref|ZP_02683158.1| shikimate kinase [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|168819008|ref|ZP_02831008.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194471551|ref|ZP_03077535.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|197249572|ref|YP_002145369.1| shikimate kinase [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197264815|ref|ZP_03164889.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197363378|ref|YP_002143015.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|200390298|ref|ZP_03216909.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205351700|ref|YP_002225501.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207855870|ref|YP_002242521.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|213053419|ref|ZP_03346297.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213427795|ref|ZP_03360545.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213609229|ref|ZP_03369055.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|213647681|ref|ZP_03377734.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
gi|213852995|ref|ZP_03382527.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
gi|289828474|ref|ZP_06546332.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|374979947|ref|ZP_09721279.1| Shikimate kinase III [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|375122482|ref|ZP_09767646.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|378443892|ref|YP_005231524.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378448716|ref|YP_005236075.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378698352|ref|YP_005180309.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378956229|ref|YP_005213716.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|378960649|ref|YP_005218135.1| shikimate kinase [Salmonella enterica subsp. enterica serovar Typhi
str. P-stx-12]
gi|378982991|ref|YP_005246146.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378987789|ref|YP_005250953.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|379699605|ref|YP_005241333.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|383495197|ref|YP_005395886.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|418791308|ref|ZP_13347071.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418793808|ref|ZP_13349534.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418799614|ref|ZP_13355280.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|418844457|ref|ZP_13399249.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|418860744|ref|ZP_13415319.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418864228|ref|ZP_13418763.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|421357824|ref|ZP_15808132.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421365183|ref|ZP_15815405.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421369043|ref|ZP_15819227.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421372490|ref|ZP_15822639.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421376102|ref|ZP_15826211.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421380671|ref|ZP_15830733.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421384036|ref|ZP_15834065.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421392537|ref|ZP_15842494.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421395946|ref|ZP_15845878.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421398605|ref|ZP_15848510.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421405213|ref|ZP_15855048.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421407812|ref|ZP_15857619.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421414113|ref|ZP_15863859.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421419502|ref|ZP_15869194.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421423821|ref|ZP_15873472.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421425575|ref|ZP_15875210.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421429923|ref|ZP_15879517.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421436750|ref|ZP_15886276.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421439124|ref|ZP_15888615.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421445798|ref|ZP_15895219.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421451249|ref|ZP_15900615.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|421884388|ref|ZP_16315603.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|422024521|ref|ZP_16370998.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422029544|ref|ZP_16375800.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427545723|ref|ZP_18926309.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427561849|ref|ZP_18931071.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427580574|ref|ZP_18935896.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427602782|ref|ZP_18940672.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427627358|ref|ZP_18945581.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427650652|ref|ZP_18950337.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427659745|ref|ZP_18955289.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427664862|ref|ZP_18960037.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|427697142|ref|ZP_18964960.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|436588118|ref|ZP_20511907.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436648699|ref|ZP_20516658.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436800975|ref|ZP_20524657.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436810539|ref|ZP_20529577.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436813713|ref|ZP_20531901.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436831437|ref|ZP_20536105.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436849723|ref|ZP_20540860.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436856136|ref|ZP_20545241.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436863121|ref|ZP_20549664.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436871597|ref|ZP_20554771.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436878748|ref|ZP_20559167.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436886863|ref|ZP_20563269.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436894469|ref|ZP_20567947.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436904596|ref|ZP_20574613.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436909927|ref|ZP_20576512.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436918180|ref|ZP_20581351.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436925598|ref|ZP_20586030.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436934221|ref|ZP_20590225.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436941352|ref|ZP_20594912.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436949341|ref|ZP_20599355.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436959606|ref|ZP_20603803.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436975175|ref|ZP_20611451.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436987132|ref|ZP_20615776.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436999669|ref|ZP_20620242.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437009987|ref|ZP_20623967.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437018216|ref|ZP_20626708.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437035499|ref|ZP_20633425.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437046651|ref|ZP_20638467.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437049402|ref|ZP_20640022.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437056784|ref|ZP_20644152.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437065236|ref|ZP_20648921.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437078984|ref|ZP_20656478.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437082007|ref|ZP_20658082.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437090032|ref|ZP_20662604.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437117102|ref|ZP_20669722.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437122602|ref|ZP_20672444.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437132704|ref|ZP_20678154.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437137811|ref|ZP_20680606.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437149124|ref|ZP_20687997.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437151917|ref|ZP_20689588.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437160866|ref|ZP_20694939.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437172721|ref|ZP_20701244.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437176777|ref|ZP_20703581.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437188186|ref|ZP_20710190.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437259647|ref|ZP_20717167.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437272658|ref|ZP_20724408.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437274676|ref|ZP_20725368.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437288296|ref|ZP_20730630.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437307068|ref|ZP_20734710.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437329090|ref|ZP_20741180.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437338579|ref|ZP_20743784.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437349583|ref|ZP_20747245.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437404359|ref|ZP_20752135.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437456215|ref|ZP_20760334.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437470063|ref|ZP_20765078.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437485218|ref|ZP_20769330.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437499106|ref|ZP_20773915.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437513585|ref|ZP_20777563.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437541343|ref|ZP_20782494.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437554690|ref|ZP_20784462.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437571635|ref|ZP_20788744.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437595509|ref|ZP_20795948.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437602424|ref|ZP_20798431.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437625299|ref|ZP_20805384.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437653978|ref|ZP_20810302.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437658535|ref|ZP_20811742.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437672124|ref|ZP_20816123.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437694848|ref|ZP_20821923.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437710291|ref|ZP_20826396.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437726185|ref|ZP_20829990.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437777632|ref|ZP_20836212.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437811552|ref|ZP_20841144.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437833212|ref|ZP_20844560.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|437869914|ref|ZP_20848341.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438015824|ref|ZP_20854679.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|438091510|ref|ZP_20861021.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438105841|ref|ZP_20866459.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438114516|ref|ZP_20870132.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438132297|ref|ZP_20873805.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|440761913|ref|ZP_20940979.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440768660|ref|ZP_20947625.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440772548|ref|ZP_20951452.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|445132348|ref|ZP_21382135.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445168120|ref|ZP_21394790.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445218122|ref|ZP_21402459.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445219509|ref|ZP_21402810.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445239061|ref|ZP_21407316.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445329398|ref|ZP_21413456.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445343584|ref|ZP_21417053.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445362508|ref|ZP_21424268.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|54036758|sp|P63604.1|AROL_SALTI RecName: Full=Shikimate kinase 2; Short=SK 2
gi|54040827|sp|P63603.1|AROL_SALTY RecName: Full=Shikimate kinase 2; Short=SK 2
gi|81360171|sp|Q5PFV5.1|AROL_SALPA RecName: Full=Shikimate kinase 2; Short=SK 2
gi|189046344|sp|A9MX50.1|AROL_SALPB RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729144|sp|B5EWS0.1|AROL_SALA4 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729146|sp|B5QTD7.1|AROL_SALEP RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729147|sp|B5R5X9.1|AROL_SALG2 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729150|sp|B5BDE5.1|AROL_SALPK RecName: Full=Shikimate kinase 2; Short=SK 2
gi|25288014|pir||AC0550 shikimate kinase II [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16418891|gb|AAL19342.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|16501657|emb|CAD08843.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29138494|gb|AAO70064.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|56128714|gb|AAV78220.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|161364795|gb|ABX68563.1| hypothetical protein SPAB_03202 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194457915|gb|EDX46754.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|197094855|emb|CAR60388.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|197213275|gb|ACH50672.1| shikimate kinase [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197243070|gb|EDY25690.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|199602743|gb|EDZ01289.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205271481|emb|CAR36299.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205329538|gb|EDZ16302.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205333328|gb|EDZ20092.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205344249|gb|EDZ31013.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205349910|gb|EDZ36541.1| shikimate kinase [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|206707673|emb|CAR31957.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|261245671|emb|CBG23467.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267992094|gb|ACY86979.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301157000|emb|CBW16483.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312911419|dbj|BAJ35393.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321225112|gb|EFX50173.1| Shikimate kinase III [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323128704|gb|ADX16134.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|326626732|gb|EGE33075.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|332987336|gb|AEF06319.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|357206840|gb|AET54886.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|374354521|gb|AEZ46282.1| Shikimate kinase 2 [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|379986102|emb|CCF87876.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|380462018|gb|AFD57421.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|392755397|gb|EJA12307.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|392763488|gb|EJA20295.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|392763932|gb|EJA20738.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392815277|gb|EJA71221.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392826128|gb|EJA81861.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|392831489|gb|EJA87122.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|395980694|gb|EJH89917.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395983338|gb|EJH92531.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395990061|gb|EJH99193.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|396000140|gb|EJI09155.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396003329|gb|EJI12317.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|396003720|gb|EJI12707.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396008098|gb|EJI17033.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396010990|gb|EJI19901.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396020598|gb|EJI29439.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396024524|gb|EJI33310.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396029744|gb|EJI38480.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396030395|gb|EJI39129.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396035642|gb|EJI44314.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396035869|gb|EJI44540.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396037207|gb|EJI45858.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396052070|gb|EJI60578.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396056846|gb|EJI65319.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396057240|gb|EJI65712.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396064004|gb|EJI72392.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|396064233|gb|EJI72620.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396071330|gb|EJI79655.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|414023245|gb|EKT06679.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414023786|gb|EKT07200.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414025262|gb|EKT08592.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414037469|gb|EKT20243.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414038596|gb|EKT21303.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414042325|gb|EKT24863.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414051853|gb|EKT33933.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414053333|gb|EKT35339.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414057828|gb|EKT39570.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414061881|gb|EKT43257.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|414067412|gb|EKT47773.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|434941299|gb|ELL47760.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434958594|gb|ELL52137.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434965031|gb|ELL57994.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434975221|gb|ELL67531.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434980726|gb|ELL72630.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434982394|gb|ELL74217.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434988300|gb|ELL79899.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434991569|gb|ELL83057.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434997648|gb|ELL88887.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|435000812|gb|ELL91934.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435007424|gb|ELL98277.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435011395|gb|ELM02115.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435017118|gb|ELM07626.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435018283|gb|ELM08758.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435028300|gb|ELM18379.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435029787|gb|ELM19837.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|435030912|gb|ELM20901.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435039991|gb|ELM29760.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435041361|gb|ELM31103.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435045183|gb|ELM34828.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435050126|gb|ELM39631.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435054039|gb|ELM43475.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435054271|gb|ELM43706.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435059713|gb|ELM48988.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435060210|gb|ELM49480.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435066887|gb|ELM55958.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435074866|gb|ELM63689.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435078121|gb|ELM66865.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435081808|gb|ELM70449.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435096302|gb|ELM84574.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435096940|gb|ELM85202.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435099884|gb|ELM88075.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435101340|gb|ELM89494.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435111175|gb|ELM99080.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435113474|gb|ELN01320.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435115050|gb|ELN02840.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435122251|gb|ELN09773.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435123428|gb|ELN10921.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435130933|gb|ELN18161.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435134445|gb|ELN21573.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435143390|gb|ELN30256.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435143798|gb|ELN30652.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435146379|gb|ELN33172.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435155502|gb|ELN42046.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435156106|gb|ELN42608.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435165035|gb|ELN51095.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435167990|gb|ELN53843.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435175754|gb|ELN61157.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435183696|gb|ELN68657.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435187056|gb|ELN71869.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435190621|gb|ELN75203.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435195970|gb|ELN80326.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435205434|gb|ELN89033.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435206922|gb|ELN90414.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435214573|gb|ELN97333.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435214948|gb|ELN97696.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435216393|gb|ELN98868.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435224029|gb|ELO06013.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435230222|gb|ELO11556.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435236634|gb|ELO17364.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435243566|gb|ELO23823.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435248088|gb|ELO28009.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435251077|gb|ELO30782.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435253118|gb|ELO32606.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435260112|gb|ELO39325.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435264746|gb|ELO43643.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435270534|gb|ELO49030.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435278428|gb|ELO56299.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435279766|gb|ELO57510.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435289064|gb|ELO66054.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435292135|gb|ELO68924.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435297906|gb|ELO74163.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435302198|gb|ELO78173.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435303869|gb|ELO79700.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435315919|gb|ELO89139.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435321530|gb|ELO93945.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435328915|gb|ELP00373.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|435334168|gb|ELP04830.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|435335185|gb|ELP05500.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|436416379|gb|ELP14285.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|436418497|gb|ELP16381.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|436424205|gb|ELP21988.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|444849036|gb|ELX74153.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444856625|gb|ELX81651.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444864635|gb|ELX89429.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444871050|gb|ELX95505.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444879158|gb|ELY03266.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444881388|gb|ELY05432.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444884187|gb|ELY08031.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444891398|gb|ELY14654.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
Length = 181
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+LVG G GKTT+G L+ A + FAD+D++++ + SVA I ++ G FR E
Sbjct: 3 QPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV-QMSVADIVEKEGWGGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
+ AL+ +S P VVATGGG ++ N R+M R G+ ++L P+ L R+ A
Sbjct: 62 TAALEAVS-APSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVNRLEA 113
>gi|417388625|ref|ZP_12152695.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|353625022|gb|EHC73933.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
Length = 181
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+LVG G GKTT+G L+ A + FAD+D++++ + SVA I ++ G FR E
Sbjct: 3 QPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV-QMSVADIVEKEGWGGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
+ AL+ +S P VVATGGG ++ N R+M R G+ ++L P+ L R+ A
Sbjct: 62 TAALEAVS-APSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVNRLEA 113
>gi|189465061|ref|ZP_03013846.1| hypothetical protein BACINT_01405 [Bacteroides intestinalis DSM
17393]
gi|189437335|gb|EDV06320.1| shikimate kinase [Bacteroides intestinalis DSM 17393]
Length = 175
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + L+ F D D Y+E+ S+ ++F E GEA FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARELNIPFIDLDWYIEERF-HKSIRELFIERGEASFRELERT 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
L +++ +++TGGG N +M G TVFL+V D L RR+ V T P+L
Sbjct: 63 MLHEVAEFENVIISTGGGTPCFFDNMEYMNDNGQTVFLDVHPDVLFRRL-RVATQQRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
D +AF + AL K R+ Y A
Sbjct: 122 Q-GKTDEELRAFI-IEALEK-RAPHYGKA 147
>gi|423368290|ref|ZP_17345722.1| shikimate kinase [Bacillus cereus VD142]
gi|401081041|gb|EJP89321.1| shikimate kinase [Bacillus cereus VD142]
Length = 165
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G++LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKVLSKELHMDVVDTDQKIEE-QKEKAIRDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLRSLP-VQNVIITTGGGIIERAENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
L D++ F + A Y AD + N
Sbjct: 118 LFQKKDIDAFITKFESRRAY-------YEEADIHIDTTN 149
>gi|149923952|ref|ZP_01912338.1| putative shikimate kinase I protein [Plesiocystis pacifica SIR-1]
gi|149815184|gb|EDM74733.1| putative shikimate kinase I protein [Plesiocystis pacifica SIR-1]
Length = 166
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 8/109 (7%)
Query: 102 MMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKL 161
MMG+GK+TVG L+ L TF D D+ +E+ M G S+A++F E GEAYFR E AL L
Sbjct: 1 MMGAGKSTVGRALAADLGATFVDLDRRIER-MFGASIAELF-EDGEAYFRACERAALCSL 58
Query: 162 SLVP-----QQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRI 204
P + V+ATGGG VV P N M G V+L +P+DAL R+
Sbjct: 59 LDEPGFAGARVVIATGGGVVVDPANRADMAGAGRVVYLELPVDALVARL 107
>gi|83859705|ref|ZP_00953225.1| shikimate kinase [Oceanicaulis sp. HTCC2633]
gi|83852064|gb|EAP89918.1| shikimate kinase [Oceanicaulis sp. HTCC2633]
Length = 186
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 10/152 (6%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
LVG+MG GKTT+G L+ L+ FAD+D+ VE+ G SV++IF + GEA FR+ E K +
Sbjct: 16 LVGLMGVGKTTIGRRLARRLNADFADADEEVER-AAGRSVSEIFADFGEAAFRDGERKVI 74
Query: 159 QKLSLVP-QQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLLD 216
+L P ++ GGGA + ++ Q I+V+L L+ L R++ + PLL
Sbjct: 75 ARLLEEPAPMIIGLGGGAFINEETRALIKAQAISVWLKADLEVLVERVSR-KPGARPLL- 132
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADATV 248
+ ++ L +ERS YA AD V
Sbjct: 133 -----AQGDPAEIMARLERERSPIYAQADIVV 159
>gi|221133688|ref|ZP_03559993.1| shikimate kinase I [Glaciecola sp. HTCC2999]
Length = 171
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 12/147 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GK+T+G L+D L F DSD +E G +A IF GE FR+ E
Sbjct: 7 IFLVGPMGAGKSTIGRHLADELHLEFFDSDHEIESKTGA-DIAWIFDLEGEEGFRKRELD 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRP-LNWRFMRQGITVFLNVPLDALARRIAAVGTDS-FPL 214
+ +LS V+ATGGG+++ P + R +GI V+L +D +++A D PL
Sbjct: 66 TINELSDKQGIVLATGGGSIITPAVRNRLSARGIVVYLQTTID---KQVARTQRDKRRPL 122
Query: 215 LDYDSADSYTKAFTALSALSKERSEAY 241
L D + T L L+KER+ Y
Sbjct: 123 LQNDDPE------TVLRNLAKERNPLY 143
>gi|421525447|ref|ZP_15972057.1| shikimate kinase [Fusobacterium nucleatum ChDC F128]
gi|402258016|gb|EJU08488.1| shikimate kinase [Fusobacterium nucleatum ChDC F128]
Length = 172
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+G MGSGKTTVG++L+ +D F D DK +E S+ IF++ G+ YFR+ E + +
Sbjct: 7 LIGFMGSGKTTVGKLLAKTMDMKFVDIDKVIEA-QEKKSINDIFQKQGQTYFRDLEREVI 65
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLLD 216
+ SL V+ATGGG+++ N + +++ VFLN ++ L R+ T P+L+
Sbjct: 66 SQESLKNDCVIATGGGSILDNENIKRLKETSFIVFLNASIECLYLRLKDNSTR--PILN 122
>gi|297181066|gb|ADI17265.1| shikimate kinase [uncultured alpha proteobacterium HF0070_17D04]
Length = 190
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
LVGMMGSGKT +G+ L+ LD F DSD + + G S+A+IF +GEA FR E A+
Sbjct: 24 LVGMMGSGKTIIGKKLAQELDLPFIDSDTRIVE-TAGISIAEIFDIAGEAKFRAMERDAI 82
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLLDY 217
+ +++TGGGA+ P + ++ I V+L+ + L RI + G S PLL
Sbjct: 83 RIAVDEGPAILSTGGGAICAPDTAELLCKRTIVVWLSAAPETLLGRIGSTG--SRPLLHG 140
Query: 218 DSADSYTKAFTALSALSKERSEAYANADATVSLLNLAA 255
D L L+ ER Y A T+ L+A
Sbjct: 141 DD------PLGMLGRLAAERETDYGKAHITIKTDGLSA 172
>gi|213416931|ref|ZP_03350075.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 148
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+LVG G GKTT+G L+ A + FAD+D++++ + SVA I ++ G FR E
Sbjct: 3 QPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV-QMSVADIVEKEGWGGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
+ AL+ +S P VVATGGG ++ N R+M R G+ ++L P+ L R+ A
Sbjct: 62 TAALEAVS-APSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVNRLEA 113
>gi|417324414|ref|ZP_12110685.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|417339655|ref|ZP_12121158.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
gi|353579063|gb|EHC40716.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|357960094|gb|EHJ84078.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
Length = 181
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+LVG G GKTT+G L+ A + FAD+D++++ + SVA I ++ G FR E
Sbjct: 3 QPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV-QMSVADIVEKEGWGGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
+ AL+ +S P VVATGGG ++ N R+M R G+ ++L P+ L R+ A
Sbjct: 62 TTALEAVS-APSTVVATGGGIILTDYNRRYMHRVGVVIYLCAPVSTLVNRLEA 113
>gi|168237496|ref|ZP_02662554.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194735163|ref|YP_002113419.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|416424647|ref|ZP_11691828.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416430919|ref|ZP_11695263.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416440042|ref|ZP_11700623.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416444600|ref|ZP_11703833.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416453805|ref|ZP_11709879.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416458528|ref|ZP_11713047.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416465565|ref|ZP_11716887.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416476943|ref|ZP_11721287.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416484310|ref|ZP_11724106.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416501614|ref|ZP_11732204.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416510533|ref|ZP_11737131.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416520542|ref|ZP_11740254.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416526595|ref|ZP_11742500.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416536196|ref|ZP_11748263.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416542282|ref|ZP_11751452.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416552420|ref|ZP_11757136.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416557224|ref|ZP_11759353.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416568155|ref|ZP_11764594.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|416576630|ref|ZP_11769212.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416583778|ref|ZP_11773534.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416595127|ref|ZP_11780941.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416596549|ref|ZP_11781441.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416605697|ref|ZP_11787129.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416614778|ref|ZP_11793030.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416620979|ref|ZP_11796082.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416634103|ref|ZP_11802384.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416639064|ref|ZP_11804363.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416648443|ref|ZP_11809088.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416661570|ref|ZP_11815562.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416670980|ref|ZP_11820469.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416673643|ref|ZP_11820966.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416691391|ref|ZP_11826213.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416706761|ref|ZP_11831950.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416713175|ref|ZP_11836817.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416719494|ref|ZP_11841350.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416723631|ref|ZP_11844297.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416734212|ref|ZP_11850867.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416740132|ref|ZP_11854220.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416745329|ref|ZP_11857261.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416757114|ref|ZP_11862944.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416764444|ref|ZP_11868048.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416766853|ref|ZP_11869469.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|418485214|ref|ZP_13054198.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418490744|ref|ZP_13057280.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418493214|ref|ZP_13059682.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418498041|ref|ZP_13064456.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418504336|ref|ZP_13070694.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418508032|ref|ZP_13074340.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418525557|ref|ZP_13091537.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|226729151|sp|B4TZG1.1|AROL_SALSV RecName: Full=Shikimate kinase 2; Short=SK 2
gi|194710665|gb|ACF89886.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197289483|gb|EDY28846.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|322614669|gb|EFY11598.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322620188|gb|EFY17060.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322623482|gb|EFY20321.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322629220|gb|EFY25999.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322631940|gb|EFY28694.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322637322|gb|EFY34024.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642008|gb|EFY38618.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322646229|gb|EFY42743.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322652504|gb|EFY48858.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322653333|gb|EFY49666.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322660518|gb|EFY56754.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322664670|gb|EFY60863.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322669277|gb|EFY65427.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322670823|gb|EFY66956.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322678939|gb|EFY74994.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322681967|gb|EFY77992.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322685204|gb|EFY81201.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323194448|gb|EFZ79643.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323197016|gb|EFZ82158.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323204000|gb|EFZ89017.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323210316|gb|EFZ95208.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323214558|gb|EFZ99309.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323223115|gb|EGA07458.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323227064|gb|EGA11245.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323230118|gb|EGA14238.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323233856|gb|EGA17945.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323238450|gb|EGA22508.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323244138|gb|EGA28147.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323246298|gb|EGA30281.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323251924|gb|EGA35787.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323257921|gb|EGA41600.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323261066|gb|EGA44658.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323265004|gb|EGA48503.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323272567|gb|EGA55974.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|363549202|gb|EHL33559.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363554531|gb|EHL38766.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363557647|gb|EHL41852.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363564646|gb|EHL48693.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363565302|gb|EHL49338.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363578257|gb|EHL62073.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|363578738|gb|EHL62540.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|366056192|gb|EHN20518.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366065031|gb|EHN29226.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366065389|gb|EHN29579.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366071178|gb|EHN35278.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366073818|gb|EHN37882.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366080338|gb|EHN44310.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366829437|gb|EHN56313.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372206326|gb|EHP19830.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
Length = 181
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+LVG G GKTT+G L+ A + FAD+D++++ + SVA I ++ G FR E
Sbjct: 3 QPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV-QMSVADIVEKEGWGGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
+ AL+ +S P VVATGGG ++ N R+M R G+ ++L P+ L R+ A
Sbjct: 62 TAALEAVS-APSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVNRLEA 113
>gi|307546345|ref|YP_003898824.1| shikimate kinase [Halomonas elongata DSM 2581]
gi|307218369|emb|CBV43639.1| shikimate kinase [Halomonas elongata DSM 2581]
Length = 180
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L LVG MG+GK+T+G +L+ L F DSD ++ G + IF GEA FR+ ES+
Sbjct: 7 LILVGPMGAGKSTIGRLLATDLSREFLDSDHEIQARCGA-DIPWIFDVEGEAGFRDRESQ 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+++L+ Q V+ATGGGAV+R N R +R+ G ++L ++ RR A + PLL
Sbjct: 66 MIRELAEREQVVIATGGGAVLREENRRVLRESGTVIYLYTTVNQQLRRTAK--DRNRPLL 123
Query: 216 DYD 218
D
Sbjct: 124 QRD 126
>gi|218281481|ref|ZP_03487924.1| hypothetical protein EUBIFOR_00489 [Eubacterium biforme DSM 3989]
gi|218217403|gb|EEC90941.1| hypothetical protein EUBIFOR_00489 [Eubacterium biforme DSM 3989]
Length = 427
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 17/163 (10%)
Query: 92 LDGQC-LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L +C + L+GM +GKTT+G++L + L F D D + G S+ +IF+ESGEA F
Sbjct: 256 LKDRCNIVLIGMPSAGKTTIGKMLEEKLGKEFFDLDDMI-IAKAGKSIPEIFQESGEAGF 314
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGT 209
R E++ + S + +++ATGGGA+ +N F+R GIT+F++ +D
Sbjct: 315 RAIETEVAIEASKMNNKIIATGGGAIKHKVNMDFLRLNGITIFIDRDIDK---------- 364
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
L+ D + + AL + KER Y A V++ N
Sbjct: 365 ----LISSDPNRPLSSSKQALQQMHKERYPLYQKYAAYVAVNN 403
>gi|62178999|ref|YP_215416.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|167551807|ref|ZP_02345560.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|198244042|ref|YP_002214342.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|224582224|ref|YP_002636022.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|375113311|ref|ZP_09758481.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|375117823|ref|ZP_09762990.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|417516328|ref|ZP_12179257.1| Shikimate kinase III [Salmonella enterica subsp. enterica serovar
Uganda str. R8-3404]
gi|445144136|ref|ZP_21386885.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|445150287|ref|ZP_21389658.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|75484617|sp|Q57SH6.1|AROL_SALCH RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729145|sp|B5FKP3.1|AROL_SALDC RecName: Full=Shikimate kinase 2; Short=SK 2
gi|254806789|sp|C0Q7R1.1|AROL_SALPC RecName: Full=Shikimate kinase 2; Short=SK 2
gi|62126632|gb|AAX64335.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|197938558|gb|ACH75891.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|205323453|gb|EDZ11292.1| shikimate kinase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|224466751|gb|ACN44581.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|322713457|gb|EFZ05028.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|326622090|gb|EGE28435.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|353654562|gb|EHC95794.1| Shikimate kinase III [Salmonella enterica subsp. enterica serovar
Uganda str. R8-3404]
gi|444847276|gb|ELX72426.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|444857036|gb|ELX82052.1| shikimate kinase II [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
Length = 181
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+LVG G GKTT+G L+ A + FAD+D++++ + SVA I ++ G FR E
Sbjct: 3 QPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV-QMSVADIVEKEGWGGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
+ AL+ +S P VVATGGG ++ N R+M R G+ ++L P+ L R+ A
Sbjct: 62 TAALEAVS-APSTVVATGGGIILTDYNRRYMHRVGVVIYLCAPVSTLVNRLEA 113
>gi|182677351|ref|YP_001831497.1| shikimate kinase., 3-dehydroquinate synthase [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182633234|gb|ACB94008.1| Shikimate kinase., 3-dehydroquinate synthase [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 593
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Query: 84 KGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFK 143
+ + S L + L LVG+MGSGKT+ G L+ L F D+D +E G ++++IF
Sbjct: 21 RAHSIISSLGSRSLVLVGLMGSGKTSTGRRLAQRLGLPFVDADVEIES-AAGMTISEIFA 79
Query: 144 ESGEAYFREYESKALQKLSLVPQQVVATGGGAVV-RPLNWRFMRQGITVFLNVPLDALAR 202
GE YFR+ E + + +L +++ATGGGA + R +G++++L D L R
Sbjct: 80 RHGEDYFRDGERRVMARLLADGPKILATGGGAFMNEETRSRIAEKGVSIWLKADPDVLWR 139
Query: 203 RIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
R+ PLL + L L ++R YA AD V
Sbjct: 140 RVKK--RPHRPLLQTREPEK------TLHRLMEQRYPIYARADIAVE 178
>gi|254000202|ref|YP_003052265.1| shikimate kinase [Methylovorus glucosetrophus SIP3-4]
gi|253986881|gb|ACT51738.1| Shikimate kinase [Methylovorus glucosetrophus SIP3-4]
Length = 168
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F VG+MG+GKTTVG +L+ L F DSD +E+ G + IF+ GEA FR ES
Sbjct: 5 IFFVGLMGAGKTTVGRVLAKHLHKAFYDSDHEIERRTG-VCIPYIFEVEGEAGFRRRESA 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDAL 200
+ +L +P VVATGGGAV+ N + ++Q G ++L ++ L
Sbjct: 64 MIDELVRMPDVVVATGGGAVLLDENRKNLKQHGTVIYLRAHVNEL 108
>gi|217967839|ref|YP_002353345.1| shikimate kinase [Dictyoglomus turgidum DSM 6724]
gi|226729124|sp|B8E0Z4.1|AROK_DICTD RecName: Full=Shikimate kinase; Short=SK
gi|217336938|gb|ACK42731.1| Shikimate kinase [Dictyoglomus turgidum DSM 6724]
Length = 172
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
L VG MGSGKT++G+ +S + F D D+Y+EK + S++ IF E GE YFR E+
Sbjct: 4 SLSFVGFMGSGKTSIGKRISLFFNIPFLDLDEYIEKKL-KKSISDIFIEKGEEYFRNIET 62
Query: 156 KALQK-LSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIA-AVGTDSF 212
++L++ SL P+ V++TGGG V+R N R +R+ ++L + L + + +
Sbjct: 63 ESLREAFSLYPKIVLSTGGGVVLREENRRILREKSKVIYLKGEFENLMKHLENKEEHEKR 122
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACIGLKDVLDITPTTIA 271
PLL K L L K+R Y + AD V + N KD+ +IT I
Sbjct: 123 PLL--------KKGREELYNLWKKRLPLYESCADIIVEVDN-------KDIDEITFEIIE 167
>gi|417363748|ref|ZP_12136876.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353599395|gb|EHC55584.1| Shikimate kinase 3 [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
Length = 194
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+LVG G GKTT+G L+ A + FAD+D++++ + SVA I ++ G FR E
Sbjct: 3 QPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV-QMSVADIVEKEGWGGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
+ AL+ +S P VVATGGG ++ N R+M R G+ ++L P+ L R+ A
Sbjct: 62 TTALEAVS-APSTVVATGGGIILTDYNRRYMHRVGVVIYLCAPVSTLVNRLEA 113
>gi|335039438|ref|ZP_08532602.1| Shikimate kinase [Caldalkalibacillus thermarum TA2.A1]
gi|334180672|gb|EGL83273.1| Shikimate kinase [Caldalkalibacillus thermarum TA2.A1]
Length = 180
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 18/165 (10%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+C+ + G MG+GK+TVG L+ + + DSD +EK + IFK GE YFR+ E
Sbjct: 2 KCISIWGFMGAGKSTVGRALARTYAWKWLDSDTEIEK-QEQLKIPDIFKRYGEEYFRQLE 60
Query: 155 SKALQ----KLSLVPQQ----VVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIA 205
++ L+ ++ PQ V+ TGGG +R N +++++ GI+++L+VP D +A+R+
Sbjct: 61 TRFLENLWNRMQSEPQASEWLVLTTGGGMPLREENRQWLKKLGISIYLHVPFDTIAKRLN 120
Query: 206 AVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
+ PL D + + + A R +Y AD + +
Sbjct: 121 RRDSQR-PLWDGSQLEVMRRKYEA-------RLPSYRQADVVMEV 157
>gi|410584241|ref|ZP_11321346.1| 3-dehydroquinate synthase [Thermaerobacter subterraneus DSM 13965]
gi|410505103|gb|EKP94613.1| 3-dehydroquinate synthase [Thermaerobacter subterraneus DSM 13965]
Length = 743
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L LVGMMG+GKTTVG L+ L + F D D VE+ G T V +F + GEA FR E +
Sbjct: 8 LVLVGMMGAGKTTVGRALAARLGWAFLDLDDLVEQAAGRT-VGALFAQEGEAGFRRREEQ 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
AL + + V+ATGGG V+ N + + V+L P + LARR+A PLL
Sbjct: 67 ALAWALALERVVIATGGGVVLSEANRAKLAAEPWVVWLEAPPEELARRLAGPEAAGRPLL 126
>gi|169632251|ref|YP_001705987.1| shikimate kinase [Acinetobacter baumannii SDF]
gi|169794486|ref|YP_001712279.1| shikimate kinase [Acinetobacter baumannii AYE]
gi|238688068|sp|B0V8M8.1|AROK_ACIBY RecName: Full=Shikimate kinase; Short=SK
gi|238688154|sp|B0VQ33.1|AROK_ACIBS RecName: Full=Shikimate kinase; Short=SK
gi|169147413|emb|CAM85274.1| shikimate-kinase [Acinetobacter baumannii AYE]
gi|169151043|emb|CAO99696.1| shikimate-kinase [Acinetobacter baumannii]
Length = 180
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 74/127 (58%), Gaps = 4/127 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G T + IF++ GE FR E+
Sbjct: 12 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKTGAT-IPWIFEKEGEVGFRTRETV 70
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L +L+ V+ATGGGA+ + N F++Q GI V+L P++ +R + PLL
Sbjct: 71 VLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL 128
Query: 216 DYDSADS 222
++ +
Sbjct: 129 QVENPEQ 135
>gi|123444150|ref|YP_001008120.1| shikimate kinase I [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|157372837|ref|YP_001480826.1| shikimate kinase I [Serratia proteamaculans 568]
gi|238751131|ref|ZP_04612626.1| Shikimate kinase 1 [Yersinia rohdei ATCC 43380]
gi|238763778|ref|ZP_04624737.1| Shikimate kinase 1 [Yersinia kristensenii ATCC 33638]
gi|238797287|ref|ZP_04640788.1| Shikimate kinase 1 [Yersinia mollaretii ATCC 43969]
gi|270264425|ref|ZP_06192691.1| shikimate kinase 1 [Serratia odorifera 4Rx13]
gi|293393376|ref|ZP_06637688.1| shikimate kinase [Serratia odorifera DSM 4582]
gi|332163310|ref|YP_004299887.1| shikimate kinase I [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|333929521|ref|YP_004503100.1| shikimate kinase [Serratia sp. AS12]
gi|333934474|ref|YP_004508052.1| shikimate kinase [Serratia plymuthica AS9]
gi|386310676|ref|YP_006006732.1| shikimate kinase I [Yersinia enterocolitica subsp. palearctica Y11]
gi|386331344|ref|YP_006027514.1| shikimate kinase [Serratia sp. AS13]
gi|386824025|ref|ZP_10111164.1| shikimate kinase I [Serratia plymuthica PRI-2C]
gi|418241132|ref|ZP_12867664.1| shikimate kinase I [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|420260400|ref|ZP_14763083.1| shikimate kinase I [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|421785973|ref|ZP_16222393.1| shikimate kinase 1 [Serratia plymuthica A30]
gi|433549114|ref|ZP_20505160.1| Shikimate kinase I [Yersinia enterocolitica IP 10393]
gi|448244312|ref|YP_007408365.1| shikimate kinase I [Serratia marcescens WW4]
gi|166219878|sp|A1JSD4.1|AROK_YERE8 RecName: Full=Shikimate kinase 1; Short=SK 1
gi|166988283|sp|A8GKQ8.1|AROK_SERP5 RecName: Full=Shikimate kinase 1; Short=SK 1
gi|122091111|emb|CAL13994.1| shikimate kinase I [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|157324601|gb|ABV43698.1| Shikimate kinase [Serratia proteamaculans 568]
gi|238698080|gb|EEP90838.1| Shikimate kinase 1 [Yersinia kristensenii ATCC 33638]
gi|238710609|gb|EEQ02832.1| Shikimate kinase 1 [Yersinia rohdei ATCC 43380]
gi|238718924|gb|EEQ10739.1| Shikimate kinase 1 [Yersinia mollaretii ATCC 43969]
gi|270041561|gb|EFA14659.1| shikimate kinase 1 [Serratia odorifera 4Rx13]
gi|291424113|gb|EFE97330.1| shikimate kinase [Serratia odorifera DSM 4582]
gi|318607799|emb|CBY29297.1| shikimate kinase I [Yersinia enterocolitica subsp. palearctica Y11]
gi|325667540|gb|ADZ44184.1| shikimate kinase I [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330861917|emb|CBX72087.1| shikimate kinase 1 [Yersinia enterocolitica W22703]
gi|333476081|gb|AEF47791.1| Shikimate kinase [Serratia plymuthica AS9]
gi|333493581|gb|AEF52743.1| Shikimate kinase [Serratia sp. AS12]
gi|333963677|gb|AEG30450.1| Shikimate kinase [Serratia sp. AS13]
gi|351779422|gb|EHB21531.1| shikimate kinase I [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|386379100|gb|EIJ19898.1| shikimate kinase I [Serratia plymuthica PRI-2C]
gi|404512216|gb|EKA26068.1| shikimate kinase I [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|407751911|gb|EKF62074.1| shikimate kinase 1 [Serratia plymuthica A30]
gi|431790155|emb|CCO68200.1| Shikimate kinase I [Yersinia enterocolitica IP 10393]
gi|445214676|gb|AGE20346.1| shikimate kinase I [Serratia marcescens WW4]
gi|453065964|gb|EMF06921.1| shikimate kinase I [Serratia marcescens VGH107]
Length = 173
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 12/172 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GK+T+G L+ L+ F DSD+ +E+ G V +F GE FR+ E K
Sbjct: 7 IFLVGPMGAGKSTIGRQLAQQLNMEFFDSDQEIERRTGA-DVGWVFDVEGEEGFRDREEK 65
Query: 157 ALQKLSLVPQQVVATGGGAV-VRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD-SFPL 214
+ +L+ V+ATGGG+V R R +G+ V+L ++ +++A D PL
Sbjct: 66 VINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKRPL 122
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACIGLKDVLDI 265
L DS L AL+KER+ Y AD T+ + +A + ++++
Sbjct: 123 LQVDSPPR-----EVLEALAKERNPLYEEIADVTIRTDDQSAKVVANQIINM 169
>gi|19704157|ref|NP_603719.1| shikimate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|296328637|ref|ZP_06871154.1| shikimate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|81484150|sp|Q8RF94.1|AROK_FUSNN RecName: Full=Shikimate kinase; Short=SK
gi|19714371|gb|AAL95018.1| Shikimate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|296154236|gb|EFG95037.1| shikimate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 172
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+G MGSGKTTVG++L+ +D F D DK +E S+ IF E G+ YFR+ E + +
Sbjct: 7 LIGFMGSGKTTVGKLLAKTMDMKFVDIDKVIEA-HEKKSINDIFHEKGQIYFRDLEREII 65
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
+ SL V+ATGGG+++ N + +++ VFLN ++ L R+
Sbjct: 66 LQESLKNDCVIATGGGSILDNENIKRLKETSFIVFLNATIECLYLRL 112
>gi|255016256|ref|ZP_05288382.1| shikimate kinase [Bacteroides sp. 2_1_7]
gi|410105166|ref|ZP_11300075.1| shikimate kinase [Parabacteroides sp. D25]
gi|409232708|gb|EKN25551.1| shikimate kinase [Parabacteroides sp. D25]
Length = 173
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 84/152 (55%), Gaps = 6/152 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GKTTVG+ L+ +F D D Y+E +V+QIF E GE FRE E
Sbjct: 4 VFLVGYMGAGKTTVGKELAKLAGLSFIDLDYYIEGRY-HKAVSQIFAERGEEAFREIERN 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
L +++ +++TGGGA N FM G TV+L V ++ LA+R+ + + P+L
Sbjct: 63 MLHEVAEFEDVLISTGGGAPCFFDNMEFMNASGTTVYLKVSVEELAKRL-ELCKHTRPVL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADAT 247
S + KAF A S ++R+ Y A T
Sbjct: 122 KGRSGEE-LKAFIAESL--EKRNPFYTKASIT 150
>gi|381152532|ref|ZP_09864401.1| shikimate kinase [Methylomicrobium album BG8]
gi|380884504|gb|EIC30381.1| shikimate kinase [Methylomicrobium album BG8]
Length = 176
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 11/159 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
+ + ++L+G+MG+GKTT+G L+ L F DSDK +E+ G ++ IF+ GEA FR
Sbjct: 1 MRSENIYLIGLMGAGKTTIGRQLAKTLKLPFYDSDKAIEEAT-GVNIPTIFEFEGEAGFR 59
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTD 210
+ E K ++ L+ + V+ATGGGA++R N +++ G V+L + + R
Sbjct: 60 DREQKMIRHLTQMHGIVLATGGGAILREENRHLLKENGFVVYLKCSVGRILERTRK--DT 117
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAY-ANADATV 248
PLL D+ + L +L ER Y A AD V
Sbjct: 118 QRPLLRTDNPRA------RLESLYAEREPLYLACADFKV 150
>gi|293602580|ref|ZP_06685025.1| shikimate kinase [Achromobacter piechaudii ATCC 43553]
gi|292819056|gb|EFF78092.1| shikimate kinase [Achromobacter piechaudii ATCC 43553]
Length = 189
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVGMMG+GKTT+G L+ AL F D D +E G V IF+ GEA FR ES
Sbjct: 20 VFLVGMMGAGKTTIGRSLARALGREFMDLDHELEA-RCGVRVPVIFEIEGEAGFRRRESA 78
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
AL++ + ++ATGGGA++ N + +R+ GI ++L +D L RR
Sbjct: 79 ALEECTQRRNIILATGGGAILASENRQRLRERGIVIYLRASVDELFRR 126
>gi|423136317|ref|ZP_17123960.1| shikimate kinase [Fusobacterium nucleatum subsp. animalis F0419]
gi|371961994|gb|EHO79608.1| shikimate kinase [Fusobacterium nucleatum subsp. animalis F0419]
Length = 172
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 5/124 (4%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+G MGSGKTTVG++L+ +D F D DK +E S+ IF E G+ YFR+ E + +
Sbjct: 7 LIGFMGSGKTTVGKLLAKTMDMKFVDIDKVIEA-HEKKSINDIFHEKGQIYFRDLEREVI 65
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLLDY 217
+ SL V+ATGGG+++ N + +++ VFLN + L R+ T P+L+
Sbjct: 66 LQESLKNDCVIATGGGSILDNENIKRLKETSFIVFLNATIKCLYLRLKDSTTR--PILN- 122
Query: 218 DSAD 221
D+ D
Sbjct: 123 DAVD 126
>gi|329964487|ref|ZP_08301541.1| shikimate kinase [Bacteroides fluxus YIT 12057]
gi|328524887|gb|EGF51939.1| shikimate kinase [Bacteroides fluxus YIT 12057]
Length = 175
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + AL+ F D D Y+E+ S+ ++F E GEA FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARALNVPFVDLDWYIEERF-HKSIRELFTERGEASFRELERN 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
L +++ +V+TGGG N +M G TVFL+V D L RR+ + T P+L
Sbjct: 63 MLHEVAEFEDVIVSTGGGTPCFFDNMEYMNGHGQTVFLDVHPDILFRRL-RIATVQRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
D AF + AL+K R+ Y A
Sbjct: 122 Q-GKTDEELYAFI-VDALAK-RAPYYTQA 147
>gi|222149984|ref|YP_002550941.1| shikimate kinase [Agrobacterium vitis S4]
gi|221736966|gb|ACM37929.1| shikimate kinase [Agrobacterium vitis S4]
Length = 197
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
S L + L VG+MG+GK+ +G +++ L+ F D+D +E++ +++++F GE
Sbjct: 18 SVLGRRNLIFVGLMGAGKSAIGRLVAQQLNLPFIDTDTEIERV-SRMTISELFAAYGETE 76
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWR-FMRQGITVFLNVPLDALARRIAAVG 208
FR E++ +++L +VV+TGGGA + R R GI+++L LD L R+
Sbjct: 77 FRALETRVIRRLLRSGPKVVSTGGGAFINDRTRRQIERGGISIWLKADLDVLWERVNK-- 134
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
D PLL + L L ER Y AD TV
Sbjct: 135 RDHRPLLKTEHPKQ------TLEKLMLERYPIYQRADITV 168
>gi|359410714|ref|ZP_09203179.1| Shikimate kinase [Clostridium sp. DL-VIII]
gi|357169598|gb|EHI97772.1| Shikimate kinase [Clostridium sp. DL-VIII]
Length = 169
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+GM G GK+T+G+++S+ L F D D+Y+E M ++ Q+F E GE YFR++E+ A
Sbjct: 7 LIGMPGCGKSTIGKVISNELKLKFYDMDEYIED-MTSKTIPQLF-EMGETYFRDFETLAC 64
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLLDY 217
++LS ++++GGG + R N +++ VF++ PL+ L + I G PLL
Sbjct: 65 RELSKKDNILISSGGGVIKRKENMDILKEKSYIVFIDRPLEELLKDIDISGR---PLL-- 119
Query: 218 DSADSYTKAFTALSALSKERSEAY 241
+ L L ER E Y
Sbjct: 120 ------KEGRDKLIKLYDERYELY 137
>gi|188587814|ref|YP_001922265.1| shikimate kinase [Clostridium botulinum E3 str. Alaska E43]
gi|226729121|sp|B2UYK3.1|AROK_CLOBA RecName: Full=Shikimate kinase; Short=SK
gi|188498095|gb|ACD51231.1| shikimate kinase [Clostridium botulinum E3 str. Alaska E43]
Length = 165
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 14/149 (9%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+GM G GK+T+GE++S L F D D Y+E+ T ++++F E GE YFR+ ES+
Sbjct: 5 VFLIGMPGCGKSTIGELISKELLLKFIDMDIYIEEKTSKT-ISELF-EQGEDYFRDIESE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
A +++ V+ATGGG V + +N ++ G+ +F++ P++ + I+ + PLL
Sbjct: 63 ACKEIIKYDNVVIATGGGVVKKGINVETLKNNGLVIFIDRPVEKI---ISDIDVSRRPLL 119
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
+ L KER + Y A
Sbjct: 120 --------KNGKERIIGLYKERYDIYNKA 140
>gi|184159707|ref|YP_001848046.1| shikimate kinase [Acinetobacter baumannii ACICU]
gi|213158942|ref|YP_002320940.1| shikimate kinase [Acinetobacter baumannii AB0057]
gi|215482075|ref|YP_002324257.1| Shikimate kinase(SK) [Acinetobacter baumannii AB307-0294]
gi|239501962|ref|ZP_04661272.1| shikimate kinase [Acinetobacter baumannii AB900]
gi|260556919|ref|ZP_05829136.1| shikimate kinase [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|301345423|ref|ZP_07226164.1| shikimate kinase [Acinetobacter baumannii AB056]
gi|301510069|ref|ZP_07235306.1| shikimate kinase [Acinetobacter baumannii AB058]
gi|301595995|ref|ZP_07241003.1| shikimate kinase [Acinetobacter baumannii AB059]
gi|332851352|ref|ZP_08433404.1| shikimate kinase [Acinetobacter baumannii 6013150]
gi|332868763|ref|ZP_08438386.1| shikimate kinase [Acinetobacter baumannii 6013113]
gi|332873778|ref|ZP_08441720.1| shikimate kinase [Acinetobacter baumannii 6014059]
gi|384133400|ref|YP_005516012.1| aroK [Acinetobacter baumannii 1656-2]
gi|384144820|ref|YP_005527530.1| shikimate kinase [Acinetobacter baumannii MDR-ZJ06]
gi|385239137|ref|YP_005800476.1| shikimate kinase [Acinetobacter baumannii TCDC-AB0715]
gi|387122376|ref|YP_006288258.1| shikimate kinase [Acinetobacter baumannii MDR-TJ]
gi|403673593|ref|ZP_10935888.1| shikimate kinase [Acinetobacter sp. NCTC 10304]
gi|407934291|ref|YP_006849934.1| aroK [Acinetobacter baumannii TYTH-1]
gi|416148880|ref|ZP_11602575.1| shikimate kinase [Acinetobacter baumannii AB210]
gi|417545669|ref|ZP_12196755.1| shikimate kinase 1 [Acinetobacter baumannii OIFC032]
gi|417550760|ref|ZP_12201839.1| shikimate kinase 1 [Acinetobacter baumannii Naval-18]
gi|417553726|ref|ZP_12204795.1| shikimate kinase 1 [Acinetobacter baumannii Naval-81]
gi|417563185|ref|ZP_12214064.1| shikimate kinase 1 [Acinetobacter baumannii OIFC137]
gi|417565637|ref|ZP_12216511.1| shikimate kinase 1 [Acinetobacter baumannii OIFC143]
gi|417571363|ref|ZP_12222220.1| shikimate kinase 1 [Acinetobacter baumannii OIFC189]
gi|417572573|ref|ZP_12223427.1| shikimate kinase 1 [Acinetobacter baumannii Canada BC-5]
gi|417576402|ref|ZP_12227247.1| shikimate kinase [Acinetobacter baumannii Naval-17]
gi|417872116|ref|ZP_12517026.1| shikimate kinase [Acinetobacter baumannii ABNIH1]
gi|417875224|ref|ZP_12520044.1| shikimate kinase [Acinetobacter baumannii ABNIH2]
gi|417880220|ref|ZP_12524754.1| shikimate kinase [Acinetobacter baumannii ABNIH3]
gi|417881175|ref|ZP_12525524.1| shikimate kinase [Acinetobacter baumannii ABNIH4]
gi|421199457|ref|ZP_15656618.1| shikimate kinase 1 [Acinetobacter baumannii OIFC109]
gi|421202134|ref|ZP_15659286.1| shikimate kinase [Acinetobacter baumannii AC12]
gi|421455549|ref|ZP_15904893.1| shikimate kinase 1 [Acinetobacter baumannii IS-123]
gi|421535131|ref|ZP_15981395.1| shikimate kinase [Acinetobacter baumannii AC30]
gi|421620977|ref|ZP_16061905.1| shikimate kinase 1 [Acinetobacter baumannii OIFC074]
gi|421624270|ref|ZP_16065143.1| shikimate kinase 1 [Acinetobacter baumannii OIFC098]
gi|421628736|ref|ZP_16069502.1| shikimate kinase 1 [Acinetobacter baumannii OIFC180]
gi|421635296|ref|ZP_16075899.1| shikimate kinase 1 [Acinetobacter baumannii Naval-13]
gi|421641841|ref|ZP_16082372.1| shikimate kinase 1 [Acinetobacter baumannii IS-235]
gi|421647641|ref|ZP_16088052.1| shikimate kinase 1 [Acinetobacter baumannii IS-251]
gi|421649909|ref|ZP_16090291.1| shikimate kinase 1 [Acinetobacter baumannii OIFC0162]
gi|421654478|ref|ZP_16094805.1| shikimate kinase 1 [Acinetobacter baumannii Naval-72]
gi|421659713|ref|ZP_16099929.1| shikimate kinase 1 [Acinetobacter baumannii Naval-83]
gi|421668116|ref|ZP_16108156.1| shikimate kinase 1 [Acinetobacter baumannii OIFC087]
gi|421668998|ref|ZP_16109026.1| shikimate kinase 1 [Acinetobacter baumannii OIFC099]
gi|421673803|ref|ZP_16113740.1| shikimate kinase 1 [Acinetobacter baumannii OIFC065]
gi|421680373|ref|ZP_16120228.1| shikimate kinase 1 [Acinetobacter baumannii OIFC111]
gi|421688643|ref|ZP_16128341.1| shikimate kinase 1 [Acinetobacter baumannii IS-143]
gi|421690289|ref|ZP_16129960.1| shikimate kinase 1 [Acinetobacter baumannii IS-116]
gi|421698226|ref|ZP_16137768.1| shikimate kinase 1 [Acinetobacter baumannii IS-58]
gi|421704968|ref|ZP_16144409.1| shikimate kinase [Acinetobacter baumannii ZWS1122]
gi|421708747|ref|ZP_16148120.1| shikimate kinase [Acinetobacter baumannii ZWS1219]
gi|421788911|ref|ZP_16225179.1| shikimate kinase 1 [Acinetobacter baumannii Naval-82]
gi|421791063|ref|ZP_16227251.1| shikimate kinase 1 [Acinetobacter baumannii Naval-2]
gi|421797138|ref|ZP_16233186.1| shikimate kinase 1 [Acinetobacter baumannii Naval-21]
gi|421800233|ref|ZP_16236212.1| shikimate kinase 1 [Acinetobacter baumannii Canada BC1]
gi|421803744|ref|ZP_16239656.1| shikimate kinase 1 [Acinetobacter baumannii WC-A-694]
gi|421807149|ref|ZP_16243010.1| shikimate kinase 1 [Acinetobacter baumannii OIFC035]
gi|424050748|ref|ZP_17788284.1| shikimate kinase [Acinetobacter baumannii Ab11111]
gi|424058446|ref|ZP_17795943.1| shikimate kinase [Acinetobacter baumannii Ab33333]
gi|424061917|ref|ZP_17799404.1| shikimate kinase [Acinetobacter baumannii Ab44444]
gi|425748421|ref|ZP_18866408.1| shikimate kinase 1 [Acinetobacter baumannii WC-348]
gi|425753994|ref|ZP_18871861.1| shikimate kinase 1 [Acinetobacter baumannii Naval-113]
gi|445410553|ref|ZP_21432869.1| shikimate kinase 1 [Acinetobacter baumannii Naval-57]
gi|445442409|ref|ZP_21442356.1| shikimate kinase 1 [Acinetobacter baumannii WC-A-92]
gi|445460931|ref|ZP_21448530.1| shikimate kinase 1 [Acinetobacter baumannii OIFC047]
gi|445470590|ref|ZP_21451522.1| shikimate kinase 1 [Acinetobacter baumannii OIFC338]
gi|445478755|ref|ZP_21454878.1| shikimate kinase 1 [Acinetobacter baumannii Naval-78]
gi|445489960|ref|ZP_21458968.1| shikimate kinase 1 [Acinetobacter baumannii AA-014]
gi|183211301|gb|ACC58699.1| Shikimate kinase [Acinetobacter baumannii ACICU]
gi|193078560|gb|ABO13583.2| shikimate-kinase [Acinetobacter baumannii ATCC 17978]
gi|213058102|gb|ACJ43004.1| shikimate kinase [Acinetobacter baumannii AB0057]
gi|213986290|gb|ACJ56589.1| Shikimate kinase(SK) [Acinetobacter baumannii AB307-0294]
gi|260409525|gb|EEX02826.1| shikimate kinase [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|322509620|gb|ADX05074.1| aroK [Acinetobacter baumannii 1656-2]
gi|323519638|gb|ADX94019.1| shikimate kinase [Acinetobacter baumannii TCDC-AB0715]
gi|332730068|gb|EGJ61396.1| shikimate kinase [Acinetobacter baumannii 6013150]
gi|332733192|gb|EGJ64389.1| shikimate kinase [Acinetobacter baumannii 6013113]
gi|332738001|gb|EGJ68886.1| shikimate kinase [Acinetobacter baumannii 6014059]
gi|333364707|gb|EGK46721.1| shikimate kinase [Acinetobacter baumannii AB210]
gi|342223805|gb|EGT88888.1| shikimate kinase [Acinetobacter baumannii ABNIH1]
gi|342225651|gb|EGT90639.1| shikimate kinase [Acinetobacter baumannii ABNIH3]
gi|342226505|gb|EGT91473.1| shikimate kinase [Acinetobacter baumannii ABNIH2]
gi|342239134|gb|EGU03547.1| shikimate kinase [Acinetobacter baumannii ABNIH4]
gi|347595313|gb|AEP08034.1| shikimate kinase [Acinetobacter baumannii MDR-ZJ06]
gi|385876868|gb|AFI93963.1| shikimate kinase [Acinetobacter baumannii MDR-TJ]
gi|395525767|gb|EJG13856.1| shikimate kinase 1 [Acinetobacter baumannii OIFC137]
gi|395551811|gb|EJG17820.1| shikimate kinase 1 [Acinetobacter baumannii OIFC189]
gi|395557393|gb|EJG23394.1| shikimate kinase 1 [Acinetobacter baumannii OIFC143]
gi|395564454|gb|EJG26105.1| shikimate kinase 1 [Acinetobacter baumannii OIFC109]
gi|395569623|gb|EJG30285.1| shikimate kinase [Acinetobacter baumannii Naval-17]
gi|398328440|gb|EJN44566.1| shikimate kinase [Acinetobacter baumannii AC12]
gi|400208141|gb|EJO39111.1| shikimate kinase 1 [Acinetobacter baumannii Canada BC-5]
gi|400211787|gb|EJO42749.1| shikimate kinase 1 [Acinetobacter baumannii IS-123]
gi|400383557|gb|EJP42235.1| shikimate kinase 1 [Acinetobacter baumannii OIFC032]
gi|400386585|gb|EJP49659.1| shikimate kinase 1 [Acinetobacter baumannii Naval-18]
gi|400390143|gb|EJP57190.1| shikimate kinase 1 [Acinetobacter baumannii Naval-81]
gi|404560400|gb|EKA65643.1| shikimate kinase 1 [Acinetobacter baumannii IS-143]
gi|404564561|gb|EKA69740.1| shikimate kinase 1 [Acinetobacter baumannii IS-116]
gi|404572526|gb|EKA77568.1| shikimate kinase 1 [Acinetobacter baumannii IS-58]
gi|404665688|gb|EKB33650.1| shikimate kinase [Acinetobacter baumannii Ab33333]
gi|404669501|gb|EKB37394.1| shikimate kinase [Acinetobacter baumannii Ab11111]
gi|404674329|gb|EKB42077.1| shikimate kinase [Acinetobacter baumannii Ab44444]
gi|407189061|gb|EKE60289.1| shikimate kinase [Acinetobacter baumannii ZWS1122]
gi|407189475|gb|EKE60701.1| shikimate kinase [Acinetobacter baumannii ZWS1219]
gi|407902872|gb|AFU39703.1| aroK [Acinetobacter baumannii TYTH-1]
gi|408510249|gb|EKK11911.1| shikimate kinase 1 [Acinetobacter baumannii Naval-72]
gi|408512308|gb|EKK13953.1| shikimate kinase 1 [Acinetobacter baumannii OIFC0162]
gi|408514593|gb|EKK16199.1| shikimate kinase 1 [Acinetobacter baumannii IS-235]
gi|408515835|gb|EKK17414.1| shikimate kinase 1 [Acinetobacter baumannii IS-251]
gi|408699837|gb|EKL45312.1| shikimate kinase 1 [Acinetobacter baumannii OIFC074]
gi|408701838|gb|EKL47260.1| shikimate kinase 1 [Acinetobacter baumannii OIFC098]
gi|408702848|gb|EKL48256.1| shikimate kinase 1 [Acinetobacter baumannii Naval-13]
gi|408705727|gb|EKL51061.1| shikimate kinase 1 [Acinetobacter baumannii OIFC180]
gi|408707046|gb|EKL52340.1| shikimate kinase 1 [Acinetobacter baumannii Naval-83]
gi|409987011|gb|EKO43200.1| shikimate kinase [Acinetobacter baumannii AC30]
gi|410380554|gb|EKP33134.1| shikimate kinase 1 [Acinetobacter baumannii OIFC087]
gi|410386021|gb|EKP38505.1| shikimate kinase 1 [Acinetobacter baumannii OIFC065]
gi|410389125|gb|EKP41540.1| shikimate kinase 1 [Acinetobacter baumannii OIFC099]
gi|410389742|gb|EKP42153.1| shikimate kinase 1 [Acinetobacter baumannii OIFC111]
gi|410397633|gb|EKP49879.1| shikimate kinase 1 [Acinetobacter baumannii Naval-21]
gi|410399797|gb|EKP51978.1| shikimate kinase 1 [Acinetobacter baumannii Naval-82]
gi|410403941|gb|EKP56015.1| shikimate kinase 1 [Acinetobacter baumannii Naval-2]
gi|410408441|gb|EKP60409.1| shikimate kinase 1 [Acinetobacter baumannii Canada BC1]
gi|410412210|gb|EKP64069.1| shikimate kinase 1 [Acinetobacter baumannii WC-A-694]
gi|410416791|gb|EKP68562.1| shikimate kinase 1 [Acinetobacter baumannii OIFC035]
gi|425491302|gb|EKU57587.1| shikimate kinase 1 [Acinetobacter baumannii WC-348]
gi|425497387|gb|EKU63493.1| shikimate kinase 1 [Acinetobacter baumannii Naval-113]
gi|444763929|gb|ELW88263.1| shikimate kinase 1 [Acinetobacter baumannii WC-A-92]
gi|444766402|gb|ELW90677.1| shikimate kinase 1 [Acinetobacter baumannii AA-014]
gi|444772395|gb|ELW96513.1| shikimate kinase 1 [Acinetobacter baumannii OIFC047]
gi|444772544|gb|ELW96659.1| shikimate kinase 1 [Acinetobacter baumannii OIFC338]
gi|444774828|gb|ELW98904.1| shikimate kinase 1 [Acinetobacter baumannii Naval-78]
gi|444779726|gb|ELX03699.1| shikimate kinase 1 [Acinetobacter baumannii Naval-57]
gi|452949415|gb|EME54883.1| shikimate kinase [Acinetobacter baumannii MSP4-16]
Length = 189
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G T + IF++ GE FR E+
Sbjct: 21 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKTGAT-IPWIFEKEGEVGFRTRETV 79
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
L +L+ V+ATGGGA+ + N F++Q GI V+L P++ +R
Sbjct: 80 VLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR 127
>gi|91209453|ref|YP_539439.1| shikimate kinase II [Escherichia coli UTI89]
gi|117622651|ref|YP_851564.1| shikimate kinase [Escherichia coli APEC O1]
gi|218557298|ref|YP_002390211.1| shikimate kinase [Escherichia coli S88]
gi|237707623|ref|ZP_04538104.1| shikimate kinase II [Escherichia sp. 3_2_53FAA]
gi|386598102|ref|YP_006099608.1| shikimate kinase [Escherichia coli IHE3034]
gi|386605660|ref|YP_006111960.1| shikimate kinase [Escherichia coli UM146]
gi|419915528|ref|ZP_14433893.1| shikimate kinase II [Escherichia coli KD1]
gi|419945608|ref|ZP_14462046.1| shikimate kinase II [Escherichia coli HM605]
gi|422356339|ref|ZP_16437028.1| shikimate kinase [Escherichia coli MS 110-3]
gi|422748545|ref|ZP_16802458.1| shikimate kinase [Escherichia coli H252]
gi|422753041|ref|ZP_16806868.1| shikimate kinase [Escherichia coli H263]
gi|422838911|ref|ZP_16886883.1| shikimate kinase 2 [Escherichia coli H397]
gi|432356733|ref|ZP_19599980.1| shikimate kinase 2 [Escherichia coli KTE4]
gi|432361140|ref|ZP_19604337.1| shikimate kinase 2 [Escherichia coli KTE5]
gi|432439702|ref|ZP_19682065.1| shikimate kinase 2 [Escherichia coli KTE189]
gi|432444826|ref|ZP_19687135.1| shikimate kinase 2 [Escherichia coli KTE191]
gi|432464398|ref|ZP_19706506.1| shikimate kinase 2 [Escherichia coli KTE205]
gi|432572384|ref|ZP_19808875.1| shikimate kinase 2 [Escherichia coli KTE55]
gi|432582498|ref|ZP_19818908.1| shikimate kinase 2 [Escherichia coli KTE57]
gi|432586688|ref|ZP_19823060.1| shikimate kinase 2 [Escherichia coli KTE58]
gi|432596274|ref|ZP_19832563.1| shikimate kinase 2 [Escherichia coli KTE62]
gi|432753186|ref|ZP_19987754.1| shikimate kinase 2 [Escherichia coli KTE22]
gi|432777241|ref|ZP_20011495.1| shikimate kinase 2 [Escherichia coli KTE59]
gi|432786037|ref|ZP_20020205.1| shikimate kinase 2 [Escherichia coli KTE65]
gi|432819708|ref|ZP_20053422.1| shikimate kinase 2 [Escherichia coli KTE118]
gi|432825837|ref|ZP_20059494.1| shikimate kinase 2 [Escherichia coli KTE123]
gi|433003915|ref|ZP_20192353.1| shikimate kinase 2 [Escherichia coli KTE227]
gi|433011123|ref|ZP_20199528.1| shikimate kinase 2 [Escherichia coli KTE229]
gi|433012563|ref|ZP_20200946.1| shikimate kinase 2 [Escherichia coli KTE104]
gi|433022136|ref|ZP_20210162.1| shikimate kinase 2 [Escherichia coli KTE106]
gi|433071435|ref|ZP_20258137.1| shikimate kinase 2 [Escherichia coli KTE129]
gi|433118936|ref|ZP_20304650.1| shikimate kinase 2 [Escherichia coli KTE157]
gi|433152533|ref|ZP_20337503.1| shikimate kinase 2 [Escherichia coli KTE176]
gi|433162203|ref|ZP_20346968.1| shikimate kinase 2 [Escherichia coli KTE179]
gi|433167178|ref|ZP_20351854.1| shikimate kinase 2 [Escherichia coli KTE180]
gi|433181919|ref|ZP_20366222.1| shikimate kinase 2 [Escherichia coli KTE85]
gi|433324548|ref|ZP_20401835.1| shikimate kinase [Escherichia coli J96]
gi|122424794|sp|Q1RFF6.1|AROL_ECOUT RecName: Full=Shikimate kinase 2; Short=SK 2
gi|166988287|sp|A1A860.1|AROL_ECOK1 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|226729134|sp|B7MD47.1|AROL_ECO45 RecName: Full=Shikimate kinase 2; Short=SK 2
gi|91071027|gb|ABE05908.1| shikimate kinase II [Escherichia coli UTI89]
gi|115511775|gb|ABI99849.1| shikimate kinase II [Escherichia coli APEC O1]
gi|218364067|emb|CAR01732.1| shikimate kinase II [Escherichia coli S88]
gi|226898833|gb|EEH85092.1| shikimate kinase II [Escherichia sp. 3_2_53FAA]
gi|294492468|gb|ADE91224.1| shikimate kinase [Escherichia coli IHE3034]
gi|307628144|gb|ADN72448.1| shikimate kinase II [Escherichia coli UM146]
gi|315289901|gb|EFU49291.1| shikimate kinase [Escherichia coli MS 110-3]
gi|323953000|gb|EGB48868.1| shikimate kinase [Escherichia coli H252]
gi|323958581|gb|EGB54284.1| shikimate kinase [Escherichia coli H263]
gi|371611382|gb|EHN99904.1| shikimate kinase 2 [Escherichia coli H397]
gi|388383872|gb|EIL45620.1| shikimate kinase II [Escherichia coli KD1]
gi|388415211|gb|EIL75144.1| shikimate kinase II [Escherichia coli HM605]
gi|430879543|gb|ELC02874.1| shikimate kinase 2 [Escherichia coli KTE4]
gi|430891375|gb|ELC13911.1| shikimate kinase 2 [Escherichia coli KTE5]
gi|430969512|gb|ELC86616.1| shikimate kinase 2 [Escherichia coli KTE189]
gi|430976201|gb|ELC93076.1| shikimate kinase 2 [Escherichia coli KTE191]
gi|430997149|gb|ELD13416.1| shikimate kinase 2 [Escherichia coli KTE205]
gi|431110722|gb|ELE14639.1| shikimate kinase 2 [Escherichia coli KTE55]
gi|431119514|gb|ELE22513.1| shikimate kinase 2 [Escherichia coli KTE57]
gi|431123968|gb|ELE26622.1| shikimate kinase 2 [Escherichia coli KTE58]
gi|431133941|gb|ELE35907.1| shikimate kinase 2 [Escherichia coli KTE62]
gi|431305567|gb|ELF93888.1| shikimate kinase 2 [Escherichia coli KTE22]
gi|431330815|gb|ELG18079.1| shikimate kinase 2 [Escherichia coli KTE59]
gi|431341968|gb|ELG28964.1| shikimate kinase 2 [Escherichia coli KTE65]
gi|431370710|gb|ELG56503.1| shikimate kinase 2 [Escherichia coli KTE118]
gi|431375221|gb|ELG60565.1| shikimate kinase 2 [Escherichia coli KTE123]
gi|431517236|gb|ELH94758.1| shikimate kinase 2 [Escherichia coli KTE227]
gi|431519335|gb|ELH96787.1| shikimate kinase 2 [Escherichia coli KTE229]
gi|431535898|gb|ELI12233.1| shikimate kinase 2 [Escherichia coli KTE104]
gi|431541021|gb|ELI16471.1| shikimate kinase 2 [Escherichia coli KTE106]
gi|431593622|gb|ELI63914.1| shikimate kinase 2 [Escherichia coli KTE129]
gi|431649285|gb|ELJ16643.1| shikimate kinase 2 [Escherichia coli KTE157]
gi|431678589|gb|ELJ44585.1| shikimate kinase 2 [Escherichia coli KTE176]
gi|431692241|gb|ELJ57679.1| shikimate kinase 2 [Escherichia coli KTE179]
gi|431694133|gb|ELJ59518.1| shikimate kinase 2 [Escherichia coli KTE180]
gi|431711815|gb|ELJ76122.1| shikimate kinase 2 [Escherichia coli KTE85]
gi|432347062|gb|ELL41526.1| shikimate kinase [Escherichia coli J96]
Length = 174
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFL+G G GKTTVG L+D+L+ F D+D +++ + T VA+I + A FR E
Sbjct: 3 QPLFLIGPRGCGKTTVGMALADSLNRRFVDTDLWLQSQLNMT-VAEIVEREEWAGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
+ AL+ ++ P V+ATGGG ++ N FM+ GI V+L P+ L R+ A
Sbjct: 62 TAALEAVT-APSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQA 113
>gi|336400623|ref|ZP_08581399.1| shikimate kinase [Fusobacterium sp. 21_1A]
gi|336162339|gb|EGN65316.1| shikimate kinase [Fusobacterium sp. 21_1A]
Length = 172
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 5/124 (4%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+G MGSGKTTVG++L+ +D F D DK +E S+ IF E G+ YFR+ E + +
Sbjct: 7 LIGFMGSGKTTVGKLLAKTMDMKFVDIDKVIEA-HEKKSINDIFHEKGQIYFRDLEREVI 65
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLLDY 217
+ SL V+ATGGG+++ N + +++ VFLN + L R+ T P+L+
Sbjct: 66 LQESLKNDCVIATGGGSILDNENIKRLKETSFIVFLNASIKCLYLRLKDSTTR--PILN- 122
Query: 218 DSAD 221
D+ D
Sbjct: 123 DAVD 126
>gi|118592098|ref|ZP_01549492.1| putative shikimate kinase [Stappia aggregata IAM 12614]
gi|118435394|gb|EAV42041.1| putative shikimate kinase [Labrenzia aggregata IAM 12614]
Length = 215
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 80/161 (49%), Gaps = 10/161 (6%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L + + LVG+MG GK+TVG+ L+ L F D+D +E+ SVA+IF E GE Y
Sbjct: 29 AALGHRSIVLVGIMGCGKSTVGKRLAHRLGLEFIDADTEIER-AANMSVAEIFAEHGEPY 87
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVV-RPLNWRFMRQGITVFLNVPLDALARRIAAVG 208
FR E + + +L QV+ATGGGA + G++++L V D + R+
Sbjct: 88 FRSGEERVIARLLREGSQVLATGGGAFMSEATRSEIAEHGLSIWLKVDFDTVMARVRRRS 147
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
T PLL + + A +R YA A TV+
Sbjct: 148 TR--PLLQNPDPEGTMRKLMA------DREPVYAKAALTVT 180
>gi|238787955|ref|ZP_04631751.1| Shikimate kinase 2 [Yersinia frederiksenii ATCC 33641]
gi|238723903|gb|EEQ15547.1| Shikimate kinase 2 [Yersinia frederiksenii ATCC 33641]
Length = 174
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G+GKTT+G+ L+ AL Y F D+D ++++ + SVA++ G FR E
Sbjct: 3 QTIFMVGARGAGKTTIGKALAQALGYRFIDTDLFMQQTLQA-SVAELVAREGWDGFRMRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIA 205
S ALQ ++ + VVATGGGAV+ N FMR G+ ++L + LA R+A
Sbjct: 62 SMALQTVT-AAKTVVATGGGAVLSQENRTFMRNHGLVIYLRASANVLAGRLA 112
>gi|421662947|ref|ZP_16103101.1| shikimate kinase 1 [Acinetobacter baumannii OIFC110]
gi|421693675|ref|ZP_16133308.1| shikimate kinase 1 [Acinetobacter baumannii WC-692]
gi|404570312|gb|EKA75389.1| shikimate kinase 1 [Acinetobacter baumannii WC-692]
gi|408713975|gb|EKL59130.1| shikimate kinase 1 [Acinetobacter baumannii OIFC110]
Length = 189
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G T + IF++ GE FR E+
Sbjct: 21 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKTGAT-IPWIFEKEGEVGFRTRETV 79
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
L +L+ V+ATGGGA+ + N F++Q GI V+L P++ +R
Sbjct: 80 VLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR 127
>gi|302389883|ref|YP_003825704.1| 3-dehydroquinate dehydratase [Thermosediminibacter oceani DSM
16646]
gi|302200511|gb|ADL08081.1| 3-dehydroquinate dehydratase, type II [Thermosediminibacter oceani
DSM 16646]
Length = 346
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 76/133 (57%), Gaps = 4/133 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MGSGKT++G++L++ L F D+D+ + + G +++IF + GE YFR E +
Sbjct: 7 IVLIGFMGSGKTSIGKMLAEKLGKRFLDTDELIRQECG-MEISEIFHKFGEEYFRNKEKE 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNW-RFMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
+++ + V+ATGGG V+ P N + R GI V+L + + +RI+ G S PL
Sbjct: 66 TVERAAAREGTVIATGGGVVLNPENMEKLRRSGIIVWLRASEEEILQRIS--GDASRPLA 123
Query: 216 DYDSADSYTKAFT 228
S + ++
Sbjct: 124 SNKSESEILEIYS 136
>gi|255525073|ref|ZP_05392018.1| Shikimate kinase [Clostridium carboxidivorans P7]
gi|255511226|gb|EET87521.1| Shikimate kinase [Clostridium carboxidivorans P7]
Length = 170
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 83/148 (56%), Gaps = 14/148 (9%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM GSGKTT+G+IL + L F D D Y+E G T + IFK +GE YFR+ E
Sbjct: 10 KNIVLIGMPGSGKTTIGKILYEKLRTDFIDMDDYIEDREGKT-IPDIFK-NGEDYFRKLE 67
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+A+ ++S +++TGGG + N +++ GI +F++ P++ +A+ I + S P
Sbjct: 68 KEAVCEVSTKKSAIISTGGGVIKNFSNIENLKKNGIVIFIDRPVENIAQDINVL---SRP 124
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAY 241
LL D K + L ER E Y
Sbjct: 125 LL----KDGVGKLYELLD----ERYELY 144
>gi|301055726|ref|YP_003793937.1| shikimate kinase [Bacillus cereus biovar anthracis str. CI]
gi|300377895|gb|ADK06799.1| shikimate kinase [Bacillus cereus biovar anthracis str. CI]
Length = 165
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ G ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELHMDVVDTDQKIEEKQ-GKAIRDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLCSLP-VDNVIITTGGGIIERVENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVTKFESRRAYYE---EAHIHIDTT 148
>gi|237744939|ref|ZP_04575420.1| shikimate kinase [Fusobacterium sp. 7_1]
gi|260494720|ref|ZP_05814850.1| shikimate kinase [Fusobacterium sp. 3_1_33]
gi|289766323|ref|ZP_06525701.1| shikimate kinase [Fusobacterium sp. D11]
gi|336417883|ref|ZP_08598166.1| shikimate kinase [Fusobacterium sp. 11_3_2]
gi|229432168|gb|EEO42380.1| shikimate kinase [Fusobacterium sp. 7_1]
gi|260197882|gb|EEW95399.1| shikimate kinase [Fusobacterium sp. 3_1_33]
gi|289717878|gb|EFD81890.1| shikimate kinase [Fusobacterium sp. D11]
gi|336163148|gb|EGN66082.1| shikimate kinase [Fusobacterium sp. 11_3_2]
Length = 172
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 5/124 (4%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+G MGSGKTTVG++L+ +D F D DK +E S+ IF E G+ YFR+ E + +
Sbjct: 7 LIGFMGSGKTTVGKLLAKTMDMKFVDIDKVIEA-HEKKSINDIFHEKGQIYFRDLEREVI 65
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLLDY 217
+ SL V+ATGGG+++ N + +++ VFLN + L R+ T P+L+
Sbjct: 66 LQESLKNDCVIATGGGSILDNENIKRLKETSFIVFLNATIKCLYLRLKDSTTR--PILN- 122
Query: 218 DSAD 221
D+ D
Sbjct: 123 DAVD 126
>gi|420655477|ref|ZP_15142395.1| shikimate kinase 2, partial [Yersinia pestis PY-34]
gi|391520573|gb|EIR73117.1| shikimate kinase 2, partial [Yersinia pestis PY-34]
Length = 115
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 69/111 (62%), Gaps = 3/111 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G+GKTT+G+ L+ AL Y F D+D ++++ +VA++ + G FR E
Sbjct: 3 QTIFMVGARGAGKTTIGKALAQALGYRFVDTDLFMQQ-TSQMTVAEVVESEGWDGFRLRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRI 204
S ALQ ++ P+ VVATGGGAV+ N FMR G ++L LA+R+
Sbjct: 62 SMALQAVT-APKTVVATGGGAVLSSENRAFMRDHGRVIYLRASAAVLAKRL 111
>gi|229828369|ref|ZP_04454438.1| hypothetical protein GCWU000342_00428 [Shuttleworthia satelles DSM
14600]
gi|229792963|gb|EEP29077.1| hypothetical protein GCWU000342_00428 [Shuttleworthia satelles DSM
14600]
Length = 249
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L+LVG MG GK+T+ L + + D D + + G VAQIF E GE FR ES+
Sbjct: 5 LYLVGFMGVGKSTIARALRRRIGWELVDIDSMIVREQG-MPVAQIFAERGEEEFRRIESE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L ++S Q+++ GGG +R N R M++ GI + L + RR+ S PLL
Sbjct: 64 TLARISEGKHQIISCGGGVPMRQENIRIMKENGICILLTASPYVILRRVEK--DTSRPLL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA-DATVSL 250
K +S L +ER Y A D VS+
Sbjct: 122 ------QGKKTIKGISGLIRERMPYYEKACDERVSV 151
>gi|423489422|ref|ZP_17466104.1| shikimate kinase [Bacillus cereus BtB2-4]
gi|423495145|ref|ZP_17471789.1| shikimate kinase [Bacillus cereus CER057]
gi|423498061|ref|ZP_17474678.1| shikimate kinase [Bacillus cereus CER074]
gi|423591766|ref|ZP_17567797.1| shikimate kinase [Bacillus cereus VD048]
gi|401151238|gb|EJQ58690.1| shikimate kinase [Bacillus cereus CER057]
gi|401161348|gb|EJQ68715.1| shikimate kinase [Bacillus cereus CER074]
gi|401231899|gb|EJR38401.1| shikimate kinase [Bacillus cereus VD048]
gi|402431658|gb|EJV63722.1| shikimate kinase [Bacillus cereus BtB2-4]
Length = 165
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G++LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKVLSKELHMDVVDTDQKIEEKQ-EKAIRDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLRSLP-VQNVIITTGGGIIERAENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
L D++ F + A Y AD + N
Sbjct: 118 LFQKKDIDAFITKFESRRAY-------YEEADIHIDTTN 149
>gi|358639198|dbj|BAL26495.1| shikimate kinase [Azoarcus sp. KH32C]
Length = 180
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVGMMG+GKTTVG + F D D +E G V IF+ GEA FR ES+
Sbjct: 3 VILVGMMGAGKTTVGREYARRHHLRFVDCDHEIEARTG-VKVPTIFEIEGEAGFRRRESQ 61
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
+ +L+ V+ATGGGAV+ P N M +GI V+LNVP L R + PLL
Sbjct: 62 LIDELTQESGLVLATGGGAVLNPDNRAMMSERGIVVYLNVPTQILWERTR--NDRNRPLL 119
Query: 216 DYDSADSYTKAFTALSALSKERSEAY-ANADATV 248
+ + L +ER Y A AD V
Sbjct: 120 QVANPRER------IETLHRERDPLYRAVADVIV 147
>gi|423669822|ref|ZP_17644851.1| shikimate kinase [Bacillus cereus VDM034]
gi|423673974|ref|ZP_17648913.1| shikimate kinase [Bacillus cereus VDM062]
gi|401298949|gb|EJS04549.1| shikimate kinase [Bacillus cereus VDM034]
gi|401309525|gb|EJS14858.1| shikimate kinase [Bacillus cereus VDM062]
Length = 165
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G++LS L D+D+ +E+ + IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKVLSKELHMDVVDTDQKIEEKQ-EKEIRDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLRSLP-VQNVIITTGGGIIERAENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
L D++ F + A Y AD + N
Sbjct: 118 LFQKKDIDAFITKFESRRAY-------YEEADIHIDTTN 149
>gi|240851371|ref|YP_002972774.1| shikimate kinase [Bartonella grahamii as4aup]
gi|240268494|gb|ACS52082.1| shikimate kinase [Bartonella grahamii as4aup]
Length = 210
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
++ S LD + L LVG+MG+GK+ +G+ ++ L F DSD+ +EK ++ ++F+ G
Sbjct: 17 QLLSSLDKKALVLVGLMGAGKSVIGKRVATMLRLPFYDSDQEIEK-AAQMTITELFEIYG 75
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIA 205
E+ FR E + + L V+ATGGGA + + + Q GI+++L V LD L +R++
Sbjct: 76 ESEFRALEQRVILNLIKKSPLVLATGGGAYINENIRKAIHQNGISIWLKVDLDILMKRVS 135
Query: 206 AVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
+ PLL + + L ++R YA A+ T++
Sbjct: 136 K--HPARPLLQTANPKE------TMQKLMEQRYPIYAKANLTIN 171
>gi|403237471|ref|ZP_10916057.1| shikimate kinase [Bacillus sp. 10403023]
Length = 172
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 10/164 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ ++L G MG+GKTT+G L +AL D+D+++E+ + G +A IF E+GE FREYE
Sbjct: 2 KAIYLTGFMGAGKTTIGAKLGEALHLPVIDTDQFIEEKV-GKRIADIFSENGEQTFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFP 213
L+++ V+ TGGG V++ N ++M G +FL ++ + R+ + P
Sbjct: 61 RSYLKEIP-TSDIVITTGGGIVIQEENRQWMLENGHVIFLYCDIEKIFERVQI--DPARP 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACI 257
L D + ++ K + +EA+ D T NLA +
Sbjct: 118 LFDTEKKENTIKLYNERMPFY---NEAHYKLDTTEK--NLAEVV 156
>gi|423138874|ref|ZP_17126512.1| shikimate kinase [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
gi|379051428|gb|EHY69319.1| shikimate kinase [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
Length = 181
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+LVG G GKTT+G L+ A + FAD+D++++ + SVA I ++ G FR E
Sbjct: 3 QPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV-QMSVADIVEKEGWGGFRVRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAA 206
+ AL+ +S P VVATGGG ++ N R+M R G+ ++L P+ L R+ A
Sbjct: 62 TAALEAVS-APSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVNRLEA 113
>gi|420639069|ref|ZP_15127548.1| shikimate kinase 2, partial [Yersinia pestis PY-25]
gi|391508282|gb|EIR62035.1| shikimate kinase 2, partial [Yersinia pestis PY-25]
Length = 114
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 69/111 (62%), Gaps = 3/111 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G+GKTT+G+ L+ AL Y F D+D ++++ +VA++ + G FR E
Sbjct: 3 QTIFMVGARGAGKTTIGKALAQALGYRFVDTDLFMQQ-TSQMTVAEVVESEGWDGFRLRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRI 204
S ALQ ++ P+ VVATGGGAV+ N FMR G ++L LA+R+
Sbjct: 62 SMALQAVT-APKTVVATGGGAVLSSENRAFMRDHGRVIYLRASAAVLAKRL 111
>gi|421874664|ref|ZP_16306266.1| shikimate kinase family protein [Brevibacillus laterosporus GI-9]
gi|372456339|emb|CCF15815.1| shikimate kinase family protein [Brevibacillus laterosporus GI-9]
Length = 165
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GK+TVGE L+ L Y D D+ + K G T + QIF E GE FR+ E+
Sbjct: 6 IILIGFMGTGKSTVGEQLAQRLHYERCDLDEEIVKATGKT-ILQIFAEDGEEIFRQLETN 64
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
L++L ++V+ TGGGAV+RP N + M Q G V L + RR+
Sbjct: 65 VLRQLVDGNRRVIITGGGAVLRPENVQVMLQHGRVVALTACEQEIIRRV 113
>gi|304395444|ref|ZP_07377327.1| Shikimate kinase [Pantoea sp. aB]
gi|304356738|gb|EFM21102.1| Shikimate kinase [Pantoea sp. aB]
Length = 174
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G G GKTTVGE LS AL Y F D+D ++ +L SV +I + G FR E++
Sbjct: 5 IFLIGARGCGKTTVGEALSQALGYAFTDTDHHL-QLSTQRSVTEIVEAEGWEGFRARETE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
+L+ ++ P+ V+ATGGG ++ N RFM++ G ++L+ + LA R+
Sbjct: 64 SLKAVT-APRTVIATGGGMILAEENCRFMQEHGQVIWLSASPEVLAERL 111
>gi|444352894|ref|YP_007389038.1| Shikimate kinase III (EC 2.7.1.71) [Enterobacter aerogenes EA1509E]
gi|443903724|emb|CCG31498.1| Shikimate kinase III (EC 2.7.1.71) [Enterobacter aerogenes EA1509E]
Length = 174
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +FL+G G GKTT+G L+ AL + F+D+D ++ T VA+I ++ G FRE E
Sbjct: 3 QPIFLIGPRGCGKTTIGHALARALHFQFSDTDHRLQAHEKRT-VAEIVQQEGWERFRELE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAA 206
+ +L+ ++L P V+ATGGG ++ N +MR+ GI ++L ++AL R+ A
Sbjct: 62 TLSLKAVTL-PDTVIATGGGIILAERNRLYMRENGIVIYLQASVNALIERLEA 113
>gi|420238806|ref|ZP_14743181.1| shikimate kinase [Rhizobium sp. CF080]
gi|398084652|gb|EJL75328.1| shikimate kinase [Rhizobium sp. CF080]
Length = 202
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 12/176 (6%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L + L VG+MG+GK+ +G +++ L F D+D +EK+ S++++F GE
Sbjct: 18 AVLGKRNLIFVGLMGAGKSAIGRLVAQTLSIPFIDTDAEIEKV-SRMSISELFAAYGETE 76
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ--GITVFLNVPLDALARRIAAV 207
FR E++ +++L +VV+TGGGA + N R + GI+++L LD L R+
Sbjct: 77 FRALETRVIERLLRGGPRVVSTGGGAFINE-NTRHQIKIGGISIWLKADLDVLWERVNK- 134
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVL 263
D PLL ++ L L +R YA AD TV N+ + + +VL
Sbjct: 135 -RDHRPLLKTENPKQ------TLENLMTQRYPIYAEADLTVQSQNVRKDVMVNEVL 183
>gi|308185850|ref|YP_003929981.1| shikimate kinase [Pantoea vagans C9-1]
gi|308056360|gb|ADO08532.1| shikimate kinase II [Pantoea vagans C9-1]
Length = 174
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G G GKTTVGE LS AL Y F D+D ++ +L SVA+I G FR E++
Sbjct: 5 IFLIGARGCGKTTVGEALSQALGYAFTDTDHHL-QLSTQRSVAEIVAAEGWDGFRARETE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRI 204
+L+ ++ P V+ATGGG ++ N RFM+ QG ++L+ + LA R+
Sbjct: 64 SLKAVT-APGTVIATGGGMILAEENCRFMQEQGRVIWLSASPEVLAERL 111
>gi|296188518|ref|ZP_06856906.1| shikimate kinase [Clostridium carboxidivorans P7]
gi|296046782|gb|EFG86228.1| shikimate kinase [Clostridium carboxidivorans P7]
Length = 164
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 83/148 (56%), Gaps = 14/148 (9%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM GSGKTT+G+IL + L F D D Y+E G T + IFK +GE YFR+ E
Sbjct: 4 KNIVLIGMPGSGKTTIGKILYEKLRTDFIDMDDYIEDREGKT-IPDIFK-NGEDYFRKLE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+A+ ++S +++TGGG + N +++ GI +F++ P++ +A+ I + S P
Sbjct: 62 KEAVCEVSTKKSAIISTGGGVIKNFSNIENLKKNGIVIFIDRPVENIAQDINVL---SRP 118
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAY 241
LL D K + L ER E Y
Sbjct: 119 LL----KDGVGKLYELLD----ERYELY 138
>gi|399925231|ref|ZP_10782589.1| shikimate kinase [Peptoniphilus rhinitidis 1-13]
Length = 503
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 87/159 (54%), Gaps = 19/159 (11%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM SGKTT+G++LS L+ F D+D +E+ SV++IF+ GE YFR+ E
Sbjct: 340 ENIILIGMPSSGKTTMGKLLSKKLNREFFDTDNLIEE-EENLSVSEIFENKGEKYFRDLE 398
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQG-ITVFLNVPLDALARRIAAVGTDSFP 213
+K L+++S V+ATGGG ++ +N + Q I ++LN R I + T P
Sbjct: 399 TKILEEVSKKNGIVIATGGGTPIKEVNRDMILQNSIVIYLN-------RNIEKLETFGRP 451
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLL 251
L +K L + +R+ Y++ +D ++++
Sbjct: 452 L---------SKNLKTLEKMYDKRNPIYSDLSDIKINVI 481
>gi|402756236|ref|ZP_10858492.1| shikimate kinase [Acinetobacter sp. NCTC 7422]
Length = 186
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G T + IF++ GE FR E+
Sbjct: 18 IYLVGPMGAGKTTVGRHLAELLGRDFIDSDHEIERKTGAT-IPWIFEKEGEVGFRLRETN 76
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L L+ V+ATGGGA+ + N F++Q GI V+L P++ +R + PLL
Sbjct: 77 VLNDLTSRSLLVLATGGGAITQSKNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL 134
Query: 216 DYDSADSYTKAFTAL 230
++ + + A+
Sbjct: 135 QVENPEQKLRDLLAI 149
>gi|251790693|ref|YP_003005414.1| shikimate kinase II [Dickeya zeae Ech1591]
gi|247539314|gb|ACT07935.1| Shikimate kinase [Dickeya zeae Ech1591]
Length = 173
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +F+VG G GKTTVG L+ AL Y F D+D +++ G +VA + G FR E
Sbjct: 3 QPIFMVGARGCGKTTVGGELAQALGYDFVDTDIFMQH-TSGLTVADVVAAEGWPGFRRRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
S ALQ ++ ++VATGGG V+ N FMR G V+L+ P LA+R+ A
Sbjct: 62 SDALQAVTTA-NRIVATGGGMVLLEQNREFMRAHGTVVYLHAPAQELAQRLQA 113
>gi|422940182|ref|ZP_16967528.1| shikimate kinase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
gi|339889911|gb|EGQ79122.1| shikimate kinase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
Length = 172
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 5/124 (4%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+G MGSGKTTVG++L+ +D F D DK +E S+ IF E G+ YFR+ E + +
Sbjct: 7 LIGFMGSGKTTVGKLLAKTMDMKFVDIDKVIEA-HEKKSINDIFHEKGQIYFRDLEREVI 65
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLLDY 217
+ SL V+ATGGG+++ N + +++ VFLN + L R+ T P+L+
Sbjct: 66 LQESLKNDCVIATGGGSILDNENIKRLKETSFIVFLNATIKCLYLRLKDSTTR--PILN- 122
Query: 218 DSAD 221
D+ D
Sbjct: 123 DAKD 126
>gi|374293291|ref|YP_005040326.1| shikimate kinase [Azospirillum lipoferum 4B]
gi|357425230|emb|CBS88116.1| Shikimate kinase [Azospirillum lipoferum 4B]
Length = 224
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 24/186 (12%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVG+MG+GK+ +G L+ L F D+D +E G ++A+IF GE FR E
Sbjct: 31 RTVVLVGLMGAGKSAIGRRLATRLHLPFRDADTEIEA-AAGCTIAEIFARDGEPVFRSVE 89
Query: 155 SKALQK-LSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSF 212
+ + + L+ P ++ATGGGA + P +RQ GI+V+L LD L R A
Sbjct: 90 RRIITRLLTDEPVHILATGGGAFMDPDTRAAIRQHGISVWLRAELDVLVARTAR--RTHR 147
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAM 272
P+L+ + L L ++R YA AD TV V D P + +
Sbjct: 148 PILNQGDPRAI------LGRLMEQRYPVYAEADLTV-------------VSDERPPDVTV 188
Query: 273 EVLVQA 278
E+++ A
Sbjct: 189 ELVIDA 194
>gi|312795822|ref|YP_004028744.1| shikimate kinase [Burkholderia rhizoxinica HKI 454]
gi|312167597|emb|CBW74600.1| Shikimate kinase (EC 2.7.1.71) [Burkholderia rhizoxinica HKI 454]
Length = 202
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F +G+MG+GKTTVG ++ L F DSD +E + G + IF+ GE FR ES
Sbjct: 15 VFFIGLMGAGKTTVGRAVARRLARPFVDSDHEIE-VRTGARIPVIFEHEGEDGFRHRESA 73
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFL 193
+ +L+ P V+ATGGGAV+RP N ++ +GI ++L
Sbjct: 74 IIDELTRRPGLVLATGGGAVMRPQNREWLHARGIVIYL 111
>gi|75760923|ref|ZP_00740933.1| Shikimate kinase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|74491593|gb|EAO54799.1| Shikimate kinase [Bacillus thuringiensis serovar israelensis ATCC
35646]
Length = 170
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 7 KSIYITGYMGAGKTTIGKALSKELHMDVVDTDQKIEEKQ-EKAIRNIFAEEGEMAFREYE 65
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 66 SEMLRSLP-VHNVIITTGGGIIERAENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 122
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 123 LFQKKDIDAFVTKFESRRAYYE---EAHIHIDTT 153
>gi|365158976|ref|ZP_09355163.1| shikimate kinase [Bacillus sp. 7_6_55CFAA_CT2]
gi|363625965|gb|EHL76974.1| shikimate kinase [Bacillus sp. 7_6_55CFAA_CT2]
Length = 165
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELHMDVVDTDQKIEEKQ-EKAIRDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQ--VVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS 211
S+ L+ L P + ++ TGGG + R N ++M++ G V+L +A R+ T
Sbjct: 61 SEMLRSL---PSRNVIITTGGGIIEREENRKWMKENGTIVYLYCDPHVIAERLREDTTR- 116
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
PL D++ K F + A + EA+ + D T
Sbjct: 117 -PLFQKKDIDAFVKKFESRRAYYE---EAHIHIDTT 148
>gi|291300628|ref|YP_003511906.1| 3-dehydroquinate synthase [Stackebrandtia nassauensis DSM 44728]
gi|290569848|gb|ADD42813.1| 3-dehydroquinate synthase [Stackebrandtia nassauensis DSM 44728]
Length = 519
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L LVG GSGKTTVG +L+D L +F D+D +EKL G ++ +IF GE +FR E++
Sbjct: 5 LVLVGPPGSGKTTVGALLADRLGVSFRDTDADIEKL-AGKAIPEIFVADGEEHFRALETQ 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRI 204
A+ V+A GGGAV+ N R + + FL+V L A R+
Sbjct: 64 AIAAALAEHDGVLALGGGAVLAETNRRLLAEAPVAFLSVELSAAVNRV 111
>gi|218698707|ref|YP_002406336.1| shikimate kinase II [Escherichia coli IAI39]
gi|386622750|ref|YP_006142478.1| shikimate kinase [Escherichia coli O7:K1 str. CE10]
gi|226729136|sp|B7NJB4.1|AROL_ECO7I RecName: Full=Shikimate kinase 2; Short=SK 2
gi|218368693|emb|CAR16433.1| shikimate kinase II [Escherichia coli IAI39]
gi|349736488|gb|AEQ11194.1| shikimate kinase II [Escherichia coli O7:K1 str. CE10]
Length = 174
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFL+G G GKTTVG L+D+L+ F D+D++++ + T VA+I + FR E
Sbjct: 3 QPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT-VAEIVEREEWTGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
+ AL+ ++ P V+ATGGG ++ N FM+ GI V+L P+ L R+ A
Sbjct: 62 TAALEAVT-APSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQA 113
>gi|336248962|ref|YP_004592672.1| shikimate kinase [Enterobacter aerogenes KCTC 2190]
gi|334735018|gb|AEG97393.1| shikimate kinase II [Enterobacter aerogenes KCTC 2190]
Length = 174
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +FL+G G GKTT+G L+ AL + F+D+D ++ T VA+I ++ G FRE E
Sbjct: 3 QPIFLIGPRGCGKTTIGHALARALHFQFSDTDHRLQAHEKRT-VAEIVQQEGWERFRELE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAA 206
+ +L+ ++L P V+ATGGG ++ N +MR+ GI ++L ++AL R+ A
Sbjct: 62 TLSLKAVTL-PDTVIATGGGIILAERNRLYMRENGIVIYLQASVNALIERLEA 113
>gi|325290048|ref|YP_004266229.1| shikimate kinase [Syntrophobotulus glycolicus DSM 8271]
gi|324965449|gb|ADY56228.1| Shikimate kinase [Syntrophobotulus glycolicus DSM 8271]
Length = 170
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 74/123 (60%), Gaps = 4/123 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVG M +GKTTVG++L+ L + F D+D+ +E+ G S+ +IFK GE FR+ E++
Sbjct: 5 IILVGFMATGKTTVGKLLAHRLGWAFLDTDQEIERTTG-LSIPEIFKRYGEESFRKEETR 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+++++ + V++TGGG V+ +W+ + + GI V L D + R A + PLL
Sbjct: 64 LVRQITKMKSTVISTGGGLVLPSDHWKLLEEVGIMVHLWADPDVIIAR--AGQNEERPLL 121
Query: 216 DYD 218
D
Sbjct: 122 QQD 124
>gi|402772497|ref|YP_006592034.1| 3-dehydroquinate synthase [Methylocystis sp. SC2]
gi|401774517|emb|CCJ07383.1| 3-dehydroquinate synthase [Methylocystis sp. SC2]
Length = 602
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 9/163 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
V + L+G+ + LVGMMGSGK+ +G+ L+ L F D+D + G S+ +IF + GE
Sbjct: 25 VRAALNGKAIVLVGMMGSGKSAIGQRLAVRLGLPFVDADAEIVAAAAGMSIPEIFAKYGE 84
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNW-RFMRQGITVFLNVPLDALARRIAA 206
YFR+ E + + +L V+ATGGGA + P R +G++V+L+ L L +R+
Sbjct: 85 RYFRDGERRVIMRLLNGGPVVLATGGGAFLDPRTRDRIAERGVSVWLDADLKTLLKRVRR 144
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
+ PLL D + L L + R Y AD V
Sbjct: 145 --KNDRPLLQTDDPEE------TLRQLLEARRPLYELADLRVE 179
>gi|430743502|ref|YP_007202631.1| shikimate kinase [Singulisphaera acidiphila DSM 18658]
gi|430015222|gb|AGA26936.1| shikimate kinase [Singulisphaera acidiphila DSM 18658]
Length = 173
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
+VG+ G+GK++VG IL+D L FAD+D +E G S+ IF E GE FR++E + L
Sbjct: 1 MVGLRGTGKSSVGRILADRLGRPFADADVELEA-ASGRSIPSIFAELGEPCFRDWEERML 59
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAA 206
+L+ P+ ++ATGGG ++R N + +R+ G V+L LA R+ A
Sbjct: 60 GELTTRPELILATGGGVILRESNRKRLREFGFVVWLTADPALLADRLLA 108
>gi|296504731|ref|YP_003666431.1| shikimate kinase [Bacillus thuringiensis BMB171]
gi|296325783|gb|ADH08711.1| shikimate kinase [Bacillus thuringiensis BMB171]
Length = 165
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSQELQMDVVDTDQKIEEKQ-EKAIRNIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLRSLP-VHNVIITTGGGIIERAENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVTKFESRRAYYE---EAHIHIDTT 148
>gi|83313025|ref|YP_423289.1| shikimate kinase [Magnetospirillum magneticum AMB-1]
gi|115312151|sp|Q2W095.1|AROK_MAGMM RecName: Full=Shikimate kinase; Short=SK
gi|82947866|dbj|BAE52730.1| Shikimate kinase [Magnetospirillum magneticum AMB-1]
Length = 195
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G+ + LVG+MG+GK+ VG L+ L F DSD E G+S++ F GEA FRE
Sbjct: 21 GRTIVLVGLMGAGKSCVGRRLAARLGLDFVDSDAEFEA-ASGSSISDYFARFGEAAFREG 79
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNW-RFMRQGITVFLNVPLDALARRIAAVGTDSF 212
E K + +L P V+ATGGGA V P R G +V++ L+ L +R VG D
Sbjct: 80 ERKVIARLLDGPPVVLATGGGAFVDPTTRERIKAAGTSVWIRADLELLLKR--TVGRDHR 137
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
PLL L L + R YA AD V
Sbjct: 138 PLLKQGDPREI------LGRLMEARYPIYAEADIIVE 168
>gi|238928089|ref|ZP_04659849.1| shikimate kinase [Selenomonas flueggei ATCC 43531]
gi|238884049|gb|EEQ47687.1| shikimate kinase [Selenomonas flueggei ATCC 43531]
Length = 173
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 82/154 (53%), Gaps = 9/154 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GK++VG +L+ L F D DK +E+ G S+ Q+F + GE YFR E +
Sbjct: 4 VVLIGFMGTGKSSVGRLLAMRLGCAFHDLDKKIEETCG-ISIPQMFAQHGEPYFRAREKE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
A++ + V+ATGGG V N +R GI V L +D + R AA G + P+L
Sbjct: 63 AVRAAAARSGLVIATGGGTVKDAENVALLRSSGILVALTADVDTILCRTAARG--ARPVL 120
Query: 216 D-YDSADSYTKAFTALSALSKERSEAYANADATV 248
D D+ D A+ L +ER Y AD V
Sbjct: 121 DGADAGDRR----AAVVRLLEERRALYEGADIAV 150
>gi|423561294|ref|ZP_17537570.1| shikimate kinase [Bacillus cereus MSX-A1]
gi|434377354|ref|YP_006611998.1| shikimate kinase [Bacillus thuringiensis HD-789]
gi|401201551|gb|EJR08416.1| shikimate kinase [Bacillus cereus MSX-A1]
gi|401875911|gb|AFQ28078.1| shikimate kinase [Bacillus thuringiensis HD-789]
Length = 165
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELHMDVVDTDQKIEEKQ-EKAIRNIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLRSLP-VHNVIITTGGGIIERAENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVTKFESRRAYYE---EAHIHIDTT 148
>gi|78064966|ref|YP_367735.1| shikimate kinase [Burkholderia sp. 383]
gi|115312141|sp|Q39KC5.1|AROK_BURS3 RecName: Full=Shikimate kinase; Short=SK
gi|77965711|gb|ABB07091.1| shikimate kinase [Burkholderia sp. 383]
Length = 184
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F VG+MG+GKTTVG ++ LD TF DSD +E G + IF+ GEA FR+ E++
Sbjct: 10 VFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEIEARTGA-RIPVIFEMEGEAGFRDRETQ 68
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFL 193
+ L+ V+ATGGGAV+RP N ++ GI V+L
Sbjct: 69 VITDLTQRENIVLATGGGAVLRPENRDCLKNNGIVVYL 106
>gi|332716416|ref|YP_004443882.1| shikimate kinase [Agrobacterium sp. H13-3]
gi|325063101|gb|ADY66791.1| Shikimate kinase [Agrobacterium sp. H13-3]
Length = 193
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 99/180 (55%), Gaps = 10/180 (5%)
Query: 85 GREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKE 144
G + + L G+ + VG+MG+GK+ +G +++ L +F D+D +E++ ++A++F
Sbjct: 13 GEQARAKLAGRNVVFVGLMGAGKSAIGRMVAQQLKVSFIDTDVEIERV-SRMTIAELFAT 71
Query: 145 SGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQG-ITVFLNVPLDALARR 203
GE FR E++ +++L +V++TGGGA + R + +G ++++L ++ L R
Sbjct: 72 YGEEEFRALETRVVKRLLRGGPKVISTGGGAFINDNTRRHITRGSVSLWLKADIEVLWER 131
Query: 204 IAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVL 263
+ D PLL ++ + L+AL ++R YA AD T+ ++ I + +VL
Sbjct: 132 VNK--RDHRPLLKTENPKA------TLAALMEKRYPIYAEADLTIESRDVRKEIIVTEVL 183
>gi|345298062|ref|YP_004827420.1| shikimate kinase [Enterobacter asburiae LF7a]
gi|345091999|gb|AEN63635.1| Shikimate kinase [Enterobacter asburiae LF7a]
Length = 174
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +FLVG G GK+TVG LS F D+D +++ G S+A+I ++ G A FR E
Sbjct: 3 QPIFLVGPRGCGKSTVGLELSRVCHSQFVDTDHWLQT-HAGQSIAEIVEQEGWASFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+ L+ ++ P V+ATGGG ++ N +FMR+ GI ++L P+ L R+ ++FP
Sbjct: 62 TATLEAVT-APSTVIATGGGIILAEYNRQFMREKGIVIYLCAPVSTLVGRL-----EAFP 115
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADA 246
+ + +S+E SE A DA
Sbjct: 116 -------EEGQRPTLTGKPISEEVSEVLAERDA 141
>gi|423630960|ref|ZP_17606707.1| shikimate kinase [Bacillus cereus VD154]
gi|423657193|ref|ZP_17632492.1| shikimate kinase [Bacillus cereus VD200]
gi|401264327|gb|EJR70439.1| shikimate kinase [Bacillus cereus VD154]
gi|401289936|gb|EJR95640.1| shikimate kinase [Bacillus cereus VD200]
Length = 165
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSQELQMDVVDTDQKIEEKQ-EKAIRDIFAEEGETAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLRSLP-VHNVIITTGGGIIERAENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVTKFESRRAYYE---EAHIHIDTT 148
>gi|14719632|pdb|1E6C|A Chain A, K15m Mutant Of Shikimate Kinase From Erwinia Chrysanthemi
gi|14719633|pdb|1E6C|B Chain B, K15m Mutant Of Shikimate Kinase From Erwinia Chrysanthemi
Length = 173
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +F+VG G G TTVG L+ AL Y F D+D +++ G +VA + G FR E
Sbjct: 3 EPIFMVGARGCGMTTVGRELARALGYEFVDTDIFMQH-TSGMTVADVVAAEGWPGFRRRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
S+ALQ ++ P +VVATGGG V+ N +FMR G V+L P + LA R+ A
Sbjct: 62 SEALQAVA-TPNRVVATGGGMVLLEQNRQFMRAHGTVVYLFAPAEELALRLQA 113
>gi|421144972|ref|ZP_15604872.1| shikimate kinase [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
gi|395488613|gb|EJG09468.1| shikimate kinase [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
Length = 172
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+G MGSGKTTVG+ L+ +D F D DK +E S+ IF E G+ YFR+ E + +
Sbjct: 7 LIGFMGSGKTTVGKFLAKTMDMKFVDIDKVIEA-HEKKSINDIFHEKGQNYFRDLEREVI 65
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
+ SL V+ATGGG+++ N + +++ VFLN ++ L R+
Sbjct: 66 LQESLKNDCVIATGGGSILDNENIKRLKETSFIVFLNATIECLYLRL 112
>gi|418406013|ref|ZP_12979333.1| shikimate kinase [Agrobacterium tumefaciens 5A]
gi|358007926|gb|EHK00249.1| shikimate kinase [Agrobacterium tumefaciens 5A]
Length = 193
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 99/180 (55%), Gaps = 10/180 (5%)
Query: 85 GREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKE 144
G + + L G+ + VG+MG+GK+ +G +++ L +F D+D +E++ ++A++F
Sbjct: 13 GEQARAKLAGRNVVFVGLMGAGKSAIGRMVAQQLKVSFIDTDVEIERV-SRMTIAELFAT 71
Query: 145 SGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQG-ITVFLNVPLDALARR 203
GE FR E++ +++L +V++TGGGA + R + +G ++++L ++ L R
Sbjct: 72 YGEEEFRALETRVVKRLLRGGPKVISTGGGAFINDNTRRHITRGSVSLWLKADIEVLWER 131
Query: 204 IAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVL 263
+ D PLL ++ + L+AL ++R YA AD T+ ++ I + +VL
Sbjct: 132 VNK--RDHRPLLKTENPKA------TLAALMEKRYPIYAEADLTIESRDVRKEIIVTEVL 183
>gi|359428745|ref|ZP_09219775.1| shikimate kinase [Acinetobacter sp. NBRC 100985]
gi|358235931|dbj|GAB01314.1| shikimate kinase [Acinetobacter sp. NBRC 100985]
Length = 186
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G T + IF++ GE FR E+
Sbjct: 18 IYLVGPMGAGKTTVGRHLAELLGRDFIDSDHEIERKTGAT-IPWIFEKEGEVGFRLRETN 76
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L L+ V+ATGGGAV + N F++Q GI V+L P++ +R + PLL
Sbjct: 77 VLNDLTNRSSLVLATGGGAVTQLANREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL 134
Query: 216 DYDSADSYTKAFTA 229
++ + + A
Sbjct: 135 QVENPEQKLRDLLA 148
>gi|260550836|ref|ZP_05825043.1| shikimate-kinase [Acinetobacter sp. RUH2624]
gi|425740024|ref|ZP_18858204.1| shikimate kinase 1 [Acinetobacter baumannii WC-487]
gi|445434958|ref|ZP_21440213.1| shikimate kinase 1 [Acinetobacter baumannii OIFC021]
gi|260406146|gb|EEW99631.1| shikimate-kinase [Acinetobacter sp. RUH2624]
gi|425495672|gb|EKU61849.1| shikimate kinase 1 [Acinetobacter baumannii WC-487]
gi|444755930|gb|ELW80494.1| shikimate kinase 1 [Acinetobacter baumannii OIFC021]
Length = 189
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G T + IF++ GE FR E+
Sbjct: 21 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKTGAT-IPWIFEKEGEVGFRTRETV 79
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
L +L+ V+ATGGGA+ + N F++Q GI ++L P++ +R
Sbjct: 80 VLNELTSRKALVLATGGGAITQAPNREFLKQRGIVIYLYTPVELQLQR 127
>gi|218131814|ref|ZP_03460618.1| hypothetical protein BACEGG_03435 [Bacteroides eggerthii DSM 20697]
gi|317474569|ref|ZP_07933843.1| shikimate kinase [Bacteroides eggerthii 1_2_48FAA]
gi|217986117|gb|EEC52456.1| shikimate kinase [Bacteroides eggerthii DSM 20697]
gi|316909250|gb|EFV30930.1| shikimate kinase [Bacteroides eggerthii 1_2_48FAA]
Length = 175
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G MG+GKTT+G+ + L+ F D D Y+E+ S+ ++F E GEA FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKAFARELNVPFIDLDWYIEERF-HKSIRELFAERGEASFRELERS 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
L ++S +V+TGGG N +M R G TVFL+V D L R+ V T P+L
Sbjct: 63 MLHEVSEFEDVIVSTGGGTPCFFDNMDYMNRHGQTVFLDVHPDILFNRL-RVATRQRPIL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANA 244
D ++F + AL K R+ Y+ A
Sbjct: 122 Q-GKTDEELRSFI-VEALDK-RAPFYSQA 147
>gi|116688416|ref|YP_834039.1| shikimate kinase [Burkholderia cenocepacia HI2424]
gi|116646505|gb|ABK07146.1| shikimate kinase [Burkholderia cenocepacia HI2424]
Length = 184
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F VG+MG+GKTTVG ++ LD TF DSD +E G + IF+ GEA FR+ E++
Sbjct: 10 VFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEIEART-GARIPVIFELEGEAGFRDRETQ 68
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFL 193
+ +L+ V+ATGGGAV+RP N ++ GI V+L
Sbjct: 69 VIAELAQRENIVLATGGGAVLRPENRDSLKTNGIVVYL 106
>gi|57234702|ref|YP_181208.1| shikimate kinase [Dehalococcoides ethenogenes 195]
gi|115312146|sp|Q3Z991.1|AROK_DEHE1 RecName: Full=Shikimate kinase; Short=SK
gi|57225150|gb|AAW40207.1| shikimate kinase [Dehalococcoides ethenogenes 195]
Length = 176
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+G MG+GK++V ++LS+ L T +D +E G S+ IFKE GE YFR+ ES+ L
Sbjct: 9 LIGFMGAGKSSVSKLLSERLGKTLVSTDACIET-REGLSIISIFKEKGEDYFRQMESRVL 67
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLLDY 217
+ L Q++ GGG V+RP N MR + ++L + L R+ + PL +
Sbjct: 68 EDLCRQSGQIIDCGGGIVMRPPNLSLMRLNCLVIYLESRPEDLEARLK--NHTNRPLYNA 125
Query: 218 DSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
+ D K + L + A A+ T+S N
Sbjct: 126 ERLDKMLKLLESRLPLYR------AAANITISTHN 154
>gi|163759947|ref|ZP_02167031.1| shikimate kinase protein [Hoeflea phototrophica DFL-43]
gi|162282905|gb|EDQ33192.1| shikimate kinase protein [Hoeflea phototrophica DFL-43]
Length = 199
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 86/159 (54%), Gaps = 10/159 (6%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L + L VG+MG+GK+ +G +++ L+ F DSD +E++ ++A++F+ GEA F
Sbjct: 19 VLGHRNLVFVGLMGAGKSAIGRLVAQMLEIPFVDSDHEIERV-SRMTIAELFEAYGEAEF 77
Query: 151 REYESKALQKLSLVPQQVVATGGGAVV-RPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
R E++ + +L +V++TGGG + R ++ G++V+L LD L R++
Sbjct: 78 RALETRVITRLMKTGPRVLSTGGGVFMNEATRSRVLKSGLSVWLKADLDILWARVSK--R 135
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
D+ PLL + LS L +R YA AD TV
Sbjct: 136 DTRPLLKTANPKQ------TLSDLLDQRYPVYALADVTV 168
>gi|423358725|ref|ZP_17336228.1| shikimate kinase [Bacillus cereus VD022]
gi|401084597|gb|EJP92843.1| shikimate kinase [Bacillus cereus VD022]
Length = 165
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSQELQMDVVDTDQKIEEKQ-KKAIRDIFAEEGEMTFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L + +A R+ T P
Sbjct: 61 SEMLRSLP-VHNVIITTGGGIIERAENRKWMKENGTVVYLYCDPNVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L ++ K F + A + EA+ + D T
Sbjct: 118 LFQKKDIAAFVKKFESRRAYYE---EAHIHIDTT 148
>gi|237741786|ref|ZP_04572267.1| shikimate kinase [Fusobacterium sp. 4_1_13]
gi|256845114|ref|ZP_05550572.1| shikimate kinase [Fusobacterium sp. 3_1_36A2]
gi|294785598|ref|ZP_06750886.1| shikimate kinase [Fusobacterium sp. 3_1_27]
gi|229429434|gb|EEO39646.1| shikimate kinase [Fusobacterium sp. 4_1_13]
gi|256718673|gb|EEU32228.1| shikimate kinase [Fusobacterium sp. 3_1_36A2]
gi|294487312|gb|EFG34674.1| shikimate kinase [Fusobacterium sp. 3_1_27]
Length = 172
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+G MGSGKTTVG+ L+ +D F D DK +E S+ IF E G+ YFR+ E + +
Sbjct: 7 LIGFMGSGKTTVGKFLAKTMDMKFVDIDKVIEA-HEKKSINDIFHEKGQNYFRDLEREVI 65
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
+ SL V+ATGGG+++ N + +++ VFLN ++ L R+
Sbjct: 66 LQESLKNDCVIATGGGSILDNENIKRLKETSFIVFLNATIECLYLRL 112
>gi|386285836|ref|ZP_10063043.1| shikimate kinase [gamma proteobacterium BDW918]
gi|385281110|gb|EIF45015.1| shikimate kinase [gamma proteobacterium BDW918]
Length = 178
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+FLVG MG+GK+T+G +L++ L + F D D+ +E+ G + IF GE FR+ E
Sbjct: 6 AVFLVGPMGAGKSTIGRLLAETLRFEFCDVDREIEE-RSGVDIPWIFDMEGEEGFRDREE 64
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIA 205
L +LS Q V++TGGGAV+R ++ + M +G ++L ++ RR A
Sbjct: 65 SMLSELSDGSQVVISTGGGAVLRSVSRKLMVARGTVIYLKTSVEEQVRRTA 115
>gi|420246457|ref|ZP_14749899.1| shikimate kinase [Burkholderia sp. BT03]
gi|398074560|gb|EJL65701.1| shikimate kinase [Burkholderia sp. BT03]
Length = 183
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F VG+MG+GKTTVG ++ LD F DSD VE G + IF+ GEA FR+ E++
Sbjct: 10 VFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEVEART-GARIPVIFELEGEAGFRDREAQ 68
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFL 193
+ +L+ V+ATGGGAV+RP N +R GI V+L
Sbjct: 69 VIAELTGRESIVLATGGGAVLRPENRDALRAHGIVVYL 106
>gi|431795543|ref|YP_007222447.1| shikimate kinase [Echinicola vietnamensis DSM 17526]
gi|430786308|gb|AGA76437.1| shikimate kinase [Echinicola vietnamensis DSM 17526]
Length = 176
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVGM GSGK+T+G+ L+ L + F D D+ + K G S+ IF E+GE YFR E++
Sbjct: 7 IVLVGMPGSGKSTLGKTLAGQLGFDFYDLDEEIVK-EEGRSIPAIFMENGEGYFRRTETR 65
Query: 157 ALQKLSLVPQQ-VVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPL 214
++KL + V++TGGGA N + R GI+VFLNV ++ L R+ D P+
Sbjct: 66 VIEKLLQIDSAFVLSTGGGAPCFNDNMTLINRHGISVFLNVSIEQLLLRLTKNEADKRPM 125
Query: 215 L 215
Sbjct: 126 F 126
>gi|262373635|ref|ZP_06066913.1| shikimate kinase [Acinetobacter junii SH205]
gi|262311388|gb|EEY92474.1| shikimate kinase [Acinetobacter junii SH205]
Length = 186
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G T + IF++ GE FR E+
Sbjct: 18 IYLVGPMGAGKTTVGRHLAELLGRDFIDSDHEIERKTGAT-IPWIFEKEGEVGFRLRETN 76
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
L L+ V+ATGGGAV + N +F+ Q GI V+L P++ +R
Sbjct: 77 VLNDLTSRSSLVLATGGGAVTQAENRQFLHQRGIVVYLYTPVELQLQR 124
>gi|423014726|ref|ZP_17005447.1| shikimate kinase [Achromobacter xylosoxidans AXX-A]
gi|338782342|gb|EGP46717.1| shikimate kinase [Achromobacter xylosoxidans AXX-A]
Length = 176
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVGMMG+GKTT+G L+ AL F D D +E G V IF+ GEA FR ES
Sbjct: 7 IFLVGMMGAGKTTIGRGLARALGRDFIDLDHELEARC-GVRVPVIFEIEGEAGFRRRESA 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARR 203
AL++ + ++ATGGGA++ N R +GI V+L +D L RR
Sbjct: 66 ALEECTQRRNIILATGGGAILAAENRLRLRERGIVVYLRASVDELFRR 113
>gi|417284723|ref|ZP_12072018.1| shikimate kinase II [Escherichia coli 3003]
gi|386242932|gb|EII84667.1| shikimate kinase II [Escherichia coli 3003]
Length = 174
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFL+G G GKTT+G L+D+L+ F D+D +++ + T VA+I + A FR E
Sbjct: 3 QPLFLIGPRGCGKTTIGMALADSLNRRFVDTDLWLQSQLNMT-VAEIVEREEWAGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
+ AL+ ++ P V+ATGGG ++ N FM+ GI V+L P+ L R+ A
Sbjct: 62 TAALEAVT-APSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQA 113
>gi|429729207|ref|ZP_19263887.1| shikimate kinase [Peptostreptococcus anaerobius VPI 4330]
gi|429145383|gb|EKX88472.1| shikimate kinase [Peptostreptococcus anaerobius VPI 4330]
Length = 493
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q ++LVGM SGKT++G +L+D L F D D+Y+E M G + IFK+ GE+ FR+YE
Sbjct: 313 QPIYLVGMPASGKTSLGRLLADLLGLGFVDLDRYIED-MTGKRLEDIFKKEGESAFRDYE 371
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVF 192
+AL + +++TGGG + R N + VF
Sbjct: 372 EEALLATCKLENTIISTGGGCITREKNREILNNSDMVF 409
>gi|423550019|ref|ZP_17526346.1| shikimate kinase [Bacillus cereus ISP3191]
gi|401189635|gb|EJQ96685.1| shikimate kinase [Bacillus cereus ISP3191]
Length = 165
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ G ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELRMDVVDTDQKIEEKQ-GKAIRDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLCSLP-VDNVIITTGGGIIERVENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVTKFESRRAYYE---EAHIHIDTT 148
>gi|423574081|ref|ZP_17550200.1| shikimate kinase [Bacillus cereus MSX-D12]
gi|401212650|gb|EJR19393.1| shikimate kinase [Bacillus cereus MSX-D12]
Length = 165
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ + IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELHMDVIDTDQKIEEKQ-EKEIRDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
SK L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SKMLRSLP-VENVIITTGGGIIEREENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVMKFELRRAYYE---EAHIHIDTT 148
>gi|390571351|ref|ZP_10251598.1| shikimate kinase [Burkholderia terrae BS001]
gi|389936696|gb|EIM98577.1| shikimate kinase [Burkholderia terrae BS001]
Length = 183
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F VG+MG+GKTTVG ++ LD F DSD VE G + IF+ GEA FR+ E++
Sbjct: 10 VFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEVEART-GARIPVIFELEGEAGFRDREAQ 68
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFL 193
+ +L+ V+ATGGGAV+RP N +R GI V+L
Sbjct: 69 VIAELTGRESIVLATGGGAVLRPENRDALRAHGIVVYL 106
>gi|424057801|ref|ZP_17795318.1| shikimate kinase [Acinetobacter nosocomialis Ab22222]
gi|407439831|gb|EKF46352.1| shikimate kinase [Acinetobacter nosocomialis Ab22222]
Length = 189
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G T + IF++ GE FR E+
Sbjct: 21 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKTGAT-IPWIFEKEGEVGFRTRETV 79
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
L +L+ V+ATGGGA+ + N F++Q GI ++L P++ +R
Sbjct: 80 VLNELTSRKALVLATGGGAITQASNREFLKQRGIVIYLYTPVELQLQR 127
>gi|42783359|ref|NP_980606.1| shikimate kinase [Bacillus cereus ATCC 10987]
gi|42739287|gb|AAS43214.1| shikimate kinase [Bacillus cereus ATCC 10987]
Length = 170
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ + IF E GE FREYE
Sbjct: 7 KSIYITGYMGAGKTTIGKALSKELHMDVIDTDQKIEEKQ-EKEIRDIFAEEGEMTFREYE 65
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 66 SEMLRSLP-VENVIITTGGGIIEREENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 122
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 123 LFQKKDIDAFVMKFESRRAYYE---EAHIHIDTT 153
>gi|159896799|ref|YP_001543046.1| shikimate kinase., 3-dehydroquinate synthase [Herpetosiphon
aurantiacus DSM 785]
gi|159889838|gb|ABX02918.1| Shikimate kinase., 3-dehydroquinate synthase [Herpetosiphon
aurantiacus DSM 785]
Length = 539
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 2/126 (1%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
GQ + L+G G+GK+TVG L+ AL + F D D+ + + S++ IF + GEA FRE
Sbjct: 5 GQSIALIGPSGAGKSTVGVGLAQALGWRFIDLDQLIIE-RAEKSISDIFSQEGEAGFRER 63
Query: 154 ESKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSF 212
E+ AL + Q V+A GGG V+R +N + +R Q V+L + L +R+ A +
Sbjct: 64 ETAALVQALQTDQAVIACGGGIVLREINRQLLREQAWCVYLTSAISTLVKRLTADQANPR 123
Query: 213 PLLDYD 218
PLL D
Sbjct: 124 PLLASD 129
>gi|91776806|ref|YP_546562.1| shikimate kinase [Methylobacillus flagellatus KT]
gi|91710793|gb|ABE50721.1| shikimate kinase [Methylobacillus flagellatus KT]
Length = 170
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F VG+MG+GKTT+G I++ L+ F DSD +E+ G S+ IF+ E FR+ E+
Sbjct: 5 IFFVGLMGAGKTTIGRIIAKHLNKAFYDSDHEIER-RTGVSIPVIFELEKEDGFRKREAA 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWR-FMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
+++LS + V+ATGGGAV+ P N + M G ++L ++ L R PLL
Sbjct: 64 VIEELSHMQDIVLATGGGAVLLPENRKHLMENGTVIYLRANVNELWHRTR--NDKHRPLL 121
Query: 216 DYDS 219
D+
Sbjct: 122 QNDN 125
>gi|386279415|ref|ZP_10057096.1| shikimate kinase 2 [Escherichia sp. 4_1_40B]
gi|417275102|ref|ZP_12062439.1| shikimate kinase II [Escherichia coli 3.2303]
gi|425281754|ref|ZP_18672875.1| shikimate kinase 2 [Escherichia coli TW00353]
gi|432690280|ref|ZP_19925526.1| shikimate kinase 2 [Escherichia coli KTE161]
gi|386123414|gb|EIG72010.1| shikimate kinase 2 [Escherichia sp. 4_1_40B]
gi|386241755|gb|EII78668.1| shikimate kinase II [Escherichia coli 3.2303]
gi|408206174|gb|EKI30986.1| shikimate kinase 2 [Escherichia coli TW00353]
gi|431230768|gb|ELF26538.1| shikimate kinase 2 [Escherichia coli KTE161]
Length = 174
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LFL+G G GKTTVG L+D+L+ F D+D++++ + T VA+I + A FR E
Sbjct: 3 QPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT-VAEIVEREEWAGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAA 206
+ AL+ ++ P V+ATGGG ++ N FM+ GI +L P+ L R+ A
Sbjct: 62 TAALEAVT-APSTVIATGGGIILTEFNRHFMQNNGIVFYLCAPVSVLVNRLQA 113
>gi|397906470|ref|ZP_10507270.1| Shikimate kinase I # AroE I [Caloramator australicus RC3]
gi|397160427|emb|CCJ34607.1| Shikimate kinase I # AroE I [Caloramator australicus RC3]
Length = 166
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+GM G GKTT+G IL++ L Y F D D+Y+E G + IF+ GE +FR+ ES++L
Sbjct: 6 LIGMPGCGKTTIGRILAEGLGYYFVDLDEYIEN-KCGMRIDYIFENLGEKFFRKLESESL 64
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVF 192
+++ ++V+ATGGG + N + +R+ VF
Sbjct: 65 KEIIAGSKKVIATGGGVITVEENIKILRENSLVF 98
>gi|134294487|ref|YP_001118222.1| shikimate kinase [Burkholderia vietnamiensis G4]
gi|134137644|gb|ABO53387.1| shikimate kinase [Burkholderia vietnamiensis G4]
Length = 184
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F VG+MG+GKTTVG ++ LD TF DSD +E G + IF+ GEA FR+ ES+
Sbjct: 10 VFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEIEARTGA-RIPVIFEMEGEAGFRDRESQ 68
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNV-PLDALARRIAAVGTDSFPL 214
+ +L+ V+ATGGGAV+R N ++ GI ++L P D R + PL
Sbjct: 69 VIAELTQRENIVLATGGGAVLRAENRECLKNHGIVIYLRANPHDLWLR---TRKDKNRPL 125
Query: 215 LDYDSADSYTKA-FTALSALSKE 236
L D + +A + A L +E
Sbjct: 126 LQTDDPKARLEALYEARDPLYRE 148
>gi|331270526|ref|YP_004397018.1| shikimate kinase [Clostridium botulinum BKT015925]
gi|329127076|gb|AEB77021.1| shikimate kinase [Clostridium botulinum BKT015925]
Length = 174
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 15/165 (9%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q + L+GM G GKTT+G+ LS+ + + F D D+Y+ S+ ++F + GE YFR+ E
Sbjct: 6 QNIVLIGMPGCGKTTIGKKLSENIGFKFCDIDEYIVNYT-DQSINELF-QKGEDYFRKIE 63
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
SK ++++ Q+++TGGG V N +++ GI +F+N PL+ + ++ + P
Sbjct: 64 SKVIKEVCKEYPQIISTGGGIVKDYKNINELKKNGIIIFINRPLEDI---LSDINIRERP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACI 257
LL S Y + KER Y + + + NL CI
Sbjct: 121 LLKEGSEKLYN--------IYKERYNLYKSYCNKEIINKNLYNCI 157
>gi|220931455|ref|YP_002508363.1| shikimate kinase [Halothermothrix orenii H 168]
gi|219992765|gb|ACL69368.1| Shikimate kinase [Halothermothrix orenii H 168]
Length = 171
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
LVG MG+GK++VG++L++ L+Y F D+D + G + QIF + GE YFR+ E + L
Sbjct: 5 LVGFMGTGKSSVGKLLAEKLNYPFLDTDDLIVN-KAGMGIPQIFSKYGEGYFRKLEEEVL 63
Query: 159 QKLSLVPQQ-VVATGGGAVVRPLNWRFMRQGIT-VFLNVPLDALARRIAAVGTDSFPLLD 216
+ + V+ATGGG V+ P N + ++ T V L+ + + RI+ D PLL
Sbjct: 64 RHVVTTGDNFVLATGGGIVISPYNRKLLKDYTTPVLLSASPEVIYERISG---DKRPLLF 120
Query: 217 YDSADSYTKAFTALSALSKERSEAYANADATV 248
D K A ER + Y+ D V
Sbjct: 121 TDDPLEKIKELLA------EREQYYSQFDNQV 146
>gi|326387721|ref|ZP_08209327.1| shikimate kinase [Novosphingobium nitrogenifigens DSM 19370]
gi|326207767|gb|EGD58578.1| shikimate kinase [Novosphingobium nitrogenifigens DSM 19370]
Length = 189
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 13/164 (7%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+A +D + L LVGMMG GKTTVG L+ L F D+D+ +E+ ++ +IF + GE
Sbjct: 14 IARRID-RPLVLVGMMGVGKTTVGRKLASLLGVPFIDADEEIER-AAHMTIPEIFAQYGE 71
Query: 148 AYFREYESKALQKL--SLVPQQVVATGGGAVVRPLNWR-FMRQGITVFLNVPLDALARRI 204
YFR+ E + + +L + ++V+ATGGGA V P R + + I V+++ ++ L R+
Sbjct: 72 PYFRDGERRVIARLVDVVTGRKVLATGGGAFVDPETRRIILERAIAVWIDSDVETLVERV 131
Query: 205 AAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
D+ PLL + L+ L ER Y A V
Sbjct: 132 GR--KDNRPLLRNGNPHEI------LTRLRIERQPHYCQAPIHV 167
>gi|262280336|ref|ZP_06058120.1| shikimate-kinase [Acinetobacter calcoaceticus RUH2202]
gi|262258114|gb|EEY76848.1| shikimate-kinase [Acinetobacter calcoaceticus RUH2202]
Length = 189
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G T + IF++ GE FR E+
Sbjct: 21 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKTGAT-IPWIFEKEGEIGFRTRETI 79
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
L +L+ V+ATGGGA+ + N F++Q GI V+L P++ +R
Sbjct: 80 VLNELTSRNALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR 127
>gi|150009401|ref|YP_001304144.1| shikimate kinase [Parabacteroides distasonis ATCC 8503]
gi|256842407|ref|ZP_05547910.1| shikimate kinase [Parabacteroides sp. D13]
gi|262384685|ref|ZP_06077818.1| shikimate kinase [Bacteroides sp. 2_1_33B]
gi|298377814|ref|ZP_06987764.1| shikimate kinase [Bacteroides sp. 3_1_19]
gi|423334150|ref|ZP_17311931.1| shikimate kinase [Parabacteroides distasonis CL03T12C09]
gi|229513679|sp|A6LFQ8.1|AROK_PARD8 RecName: Full=Shikimate kinase; Short=SK
gi|149937825|gb|ABR44522.1| shikimate kinase [Parabacteroides distasonis ATCC 8503]
gi|256736014|gb|EEU49345.1| shikimate kinase [Parabacteroides sp. D13]
gi|262293666|gb|EEY81601.1| shikimate kinase [Bacteroides sp. 2_1_33B]
gi|298265260|gb|EFI06923.1| shikimate kinase [Bacteroides sp. 3_1_19]
gi|409225913|gb|EKN18827.1| shikimate kinase [Parabacteroides distasonis CL03T12C09]
Length = 173
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 84/152 (55%), Gaps = 6/152 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GKTTVG+ L+ +F D D Y+E +V+QIF E GE FRE E
Sbjct: 4 VFLVGYMGAGKTTVGKELAKLAGLSFIDLDYYIEGRY-HKAVSQIFAERGEEAFREIERN 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
L +++ +++TGGGA N FM G TV+L V ++ LA+R+ + + P+L
Sbjct: 63 MLHEVAEFEDVLISTGGGAPCFFDNMEFMNASGTTVYLKVSVEELAKRL-ELCKHTRPVL 121
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADAT 247
S + +AF A S ++R+ Y A T
Sbjct: 122 KGRSGEE-LRAFIAESL--EKRNPFYTKASIT 150
>gi|373496912|ref|ZP_09587455.1| hypothetical protein HMPREF0402_01328 [Fusobacterium sp. 12_1B]
gi|404366927|ref|ZP_10972303.1| hypothetical protein FUAG_02205 [Fusobacterium ulcerans ATCC 49185]
gi|313689855|gb|EFS26690.1| hypothetical protein FUAG_02205 [Fusobacterium ulcerans ATCC 49185]
gi|371964571|gb|EHO82084.1| hypothetical protein HMPREF0402_01328 [Fusobacterium sp. 12_1B]
Length = 172
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 11/154 (7%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+G MGSGK+T+G +L+ LD F D DK + T + +IF+E GEAYFR+ E + +
Sbjct: 7 LIGFMGSGKSTIGRVLAKYLDMKFIDIDKMISAREKKT-IPEIFEEKGEAYFRKLEREIV 65
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLLDY 217
+ SL V+ATGGG ++ N + +R+ V+L+ ++ + R+ + PLL+
Sbjct: 66 YEESLDNNIVIATGGGVIIDNENIKTLRETSFIVYLDCTIECIYERVRH--SKGRPLLNV 123
Query: 218 DSADSYTKAFTALSALSKERSEAY-ANADATVSL 250
+ F + L +R Y +AD +V +
Sbjct: 124 ED------MFEKIKELHSKREILYRISADFSVRI 151
>gi|206971211|ref|ZP_03232162.1| shikimate kinase [Bacillus cereus AH1134]
gi|206733983|gb|EDZ51154.1| shikimate kinase [Bacillus cereus AH1134]
Length = 165
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELHMDVVDTDQKIEEKQ-EKAIRDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLRSLPSC-NVIITTGGGIIEREENRKWMKENGTIVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ K F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVKKFESRRAYYE---EAHIHIDTT 148
>gi|423373948|ref|ZP_17351287.1| shikimate kinase [Bacillus cereus AND1407]
gi|401094763|gb|EJQ02833.1| shikimate kinase [Bacillus cereus AND1407]
Length = 165
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G+ LS L D+D+ +E+ + IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELHMDVIDTDQKIEEKQ-EKEIRDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ L+ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMLRSLP-VENVIITTGGGIIEREENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADAT 247
L D++ F + A + EA+ + D T
Sbjct: 118 LFQKKDIDAFVTKFESRRAYYE---EAHIHIDTT 148
>gi|260599691|ref|YP_003212262.1| shikimate kinase I [Cronobacter turicensis z3032]
gi|389839280|ref|YP_006341364.1| shikimate kinase I [Cronobacter sakazakii ES15]
gi|417790802|ref|ZP_12438319.1| shikimate kinase I [Cronobacter sakazakii E899]
gi|424801411|ref|ZP_18226953.1| Shikimate kinase I [Cronobacter sakazakii 696]
gi|429088448|ref|ZP_19151180.1| Shikimate kinase I [Cronobacter universalis NCTC 9529]
gi|429092626|ref|ZP_19155253.1| Shikimate kinase I [Cronobacter dublinensis 1210]
gi|429111979|ref|ZP_19173749.1| Shikimate kinase I [Cronobacter malonaticus 507]
gi|429117153|ref|ZP_19178071.1| Shikimate kinase I [Cronobacter sakazakii 701]
gi|429121735|ref|ZP_19182345.1| Shikimate kinase I [Cronobacter sakazakii 680]
gi|449310501|ref|YP_007442857.1| shikimate kinase I [Cronobacter sakazakii SP291]
gi|260218868|emb|CBA34223.1| Shikimate kinase 1 [Cronobacter turicensis z3032]
gi|333955071|gb|EGL72856.1| shikimate kinase I [Cronobacter sakazakii E899]
gi|387849756|gb|AFJ97853.1| shikimate kinase I [Cronobacter sakazakii ES15]
gi|423237132|emb|CCK08823.1| Shikimate kinase I [Cronobacter sakazakii 696]
gi|426313136|emb|CCJ99862.1| Shikimate kinase I [Cronobacter malonaticus 507]
gi|426320282|emb|CCK04184.1| Shikimate kinase I [Cronobacter sakazakii 701]
gi|426323729|emb|CCK13082.1| Shikimate kinase I [Cronobacter sakazakii 680]
gi|426508251|emb|CCK16292.1| Shikimate kinase I [Cronobacter universalis NCTC 9529]
gi|426742589|emb|CCJ81366.1| Shikimate kinase I [Cronobacter dublinensis 1210]
gi|449100534|gb|AGE88568.1| shikimate kinase I [Cronobacter sakazakii SP291]
Length = 173
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 86/164 (52%), Gaps = 12/164 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GK+T+G L+ L+ F DSD+ +EK G V +F GE FR+ E K
Sbjct: 7 IFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGA-DVGWVFDVEGEEGFRDREEK 65
Query: 157 ALQKLSLVPQQVVATGGGAV-VRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD-SFPL 214
+ +L+ V+ATGGG+V R R +G+ V+L ++ +++A D PL
Sbjct: 66 VINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKRPL 122
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACI 257
L D T L AL+ ER+ Y AD T+ + +A +
Sbjct: 123 LQVD-----TPPREVLEALANERNPLYEEIADVTIRTDDQSAKV 161
>gi|83951801|ref|ZP_00960533.1| shikimate kinase [Roseovarius nubinhibens ISM]
gi|83836807|gb|EAP76104.1| shikimate kinase [Roseovarius nubinhibens ISM]
Length = 196
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 22/176 (12%)
Query: 77 GKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGT 136
G+W LK + + +VGMMG+GKT VG L+ L F DSD +E
Sbjct: 15 GEWNLK------------KTVVMVGMMGAGKTAVGRALATRLGVPFLDSDAEIEA-AATM 61
Query: 137 SVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNV 195
S+A+IF+ GEA+FR+ E++ + +L + +++TGGGA + N + + Q G++V+L+
Sbjct: 62 SIAEIFERDGEAFFRDRETEVIDRLLENQRGILSTGGGAFLSERNRQIISQKGVSVWLDA 121
Query: 196 PLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLL 251
LD L R+ T PLL L L + R +Y AD V L
Sbjct: 122 DLDLLWSRVKHKNTR--PLL------RTANPRETLKTLYEARVPSYRKADLAVRSL 169
>gi|238783116|ref|ZP_04627142.1| Shikimate kinase 1 [Yersinia bercovieri ATCC 43970]
gi|238715912|gb|EEQ07898.1| Shikimate kinase 1 [Yersinia bercovieri ATCC 43970]
Length = 173
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 12/172 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GK+T+G L+ L+ F DSD+ +E+ G V +F GE FR+ E K
Sbjct: 7 IFLVGPMGAGKSTIGRQLAQQLNMEFFDSDQEIERRTGA-DVGWVFDVEGEEGFRDREEK 65
Query: 157 ALQKLSLVPQQVVATGGGAV-VRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD-SFPL 214
+ +L+ V+ATGGG+V R R +G+ V+L ++ +++A D PL
Sbjct: 66 VINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKRPL 122
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACIGLKDVLDI 265
L DS L AL++ER+ Y AD T+ + +A + ++++
Sbjct: 123 LQVDSPPR-----EVLEALARERNPLYEEIADVTIRTDDQSAKVVANQIINM 169
>gi|444356106|ref|ZP_21157812.1| shikimate kinase [Burkholderia cenocepacia BC7]
gi|444366872|ref|ZP_21166879.1| shikimate kinase [Burkholderia cenocepacia K56-2Valvano]
gi|443603852|gb|ELT71831.1| shikimate kinase [Burkholderia cenocepacia K56-2Valvano]
gi|443607610|gb|ELT75294.1| shikimate kinase [Burkholderia cenocepacia BC7]
Length = 190
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F VG+MG+GKTTVG ++ LD TF DSD +E G + IF+ GEA FR+ E++
Sbjct: 16 VFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEIEARTGA-RIPVIFELEGEAGFRDRETQ 74
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFL 193
+ L+ V+ATGGGAV+RP N ++ GI V+L
Sbjct: 75 VIADLTQRENIVLATGGGAVLRPENRDSLKTNGIVVYL 112
>gi|387793517|ref|YP_006258582.1| shikimate kinase [Solitalea canadensis DSM 3403]
gi|379656350|gb|AFD09406.1| shikimate kinase [Solitalea canadensis DSM 3403]
Length = 167
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G MG+GKTT G+ L+ L+Y F D D +E++ GGT V + F GE FRE E
Sbjct: 3 VFLIGFMGAGKTTFGKKLAKNLNYPFFDLDHLIEEITGGT-VGEYFATHGEIKFRELEKD 61
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
LQ V++TGGGA N +M + G T++L + ALA R+ + PL+
Sbjct: 62 ILQTHPFPENYVLSTGGGAPCFHDNMDWMNKNGQTIYLQLSPKALATRLENA-KEQRPLI 120
Query: 216 DYDSADSYTKAFTALSALSKERSEA----YANADATVSLLNLAACI 257
D K +ER EA Y A V LN+ I
Sbjct: 121 KDLKGDDLIK-------FIEERLEARDIHYKKAHFIVDGLNVHPEI 159
>gi|421760198|ref|ZP_16197017.1| shikimate kinase [Bartonella bacilliformis INS]
gi|411175915|gb|EKS45936.1| shikimate kinase [Bartonella bacilliformis INS]
Length = 208
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 24/203 (11%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
E+ SC + Q L VG MGSGK+ +G+ ++ LD F DSD+ +EK +++ +F+ G
Sbjct: 17 ELLSCFNQQSLVFVGFMGSGKSAIGKRVATMLDLPFYDSDQEIEK-AAQMTISDLFEIYG 75
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWR--FMRQGITVFLNVPLDALARRI 204
E+ FR E + + + V+ATGGGA + N R +GI+++L + L +R+
Sbjct: 76 ESEFRLLEQRVILNILKNGPLVLATGGGAYINE-NIRKAIHHKGISIWLKTDFNLLIKRV 134
Query: 205 AAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLD 264
+ T PLL D+ + L ++R YA A+ V K+ +
Sbjct: 135 SQRLTR--PLLQTDNPQE------TVRTLMEQRYPIYATANLMVK--------NHKESRN 178
Query: 265 ITPTTIAMEVLVQAQKYLNSKRR 287
+ +A +V+ + Q Y+N + +
Sbjct: 179 M----VAKKVIKRVQNYINDRNK 197
>gi|254303839|ref|ZP_04971197.1| shikimate kinase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148324031|gb|EDK89281.1| shikimate kinase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 172
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Query: 99 LVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKAL 158
L+G MGSGKTTVG++L+ ++ F D DK +E S+ IF E G+ YFR+ E + +
Sbjct: 7 LIGFMGSGKTTVGKLLAKTMEMKFVDIDKVIEA-HEKKSINDIFHEKGQIYFRDLEREVI 65
Query: 159 QKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
+ SL V+ATGGG+++ N + +++ VFLN ++ L R+
Sbjct: 66 SQESLKNDCVIATGGGSILDNENIKRLKETSFIVFLNATIECLYLRL 112
>gi|317049887|ref|YP_004117535.1| shikimate kinase [Pantoea sp. At-9b]
gi|316951504|gb|ADU70979.1| Shikimate kinase [Pantoea sp. At-9b]
Length = 199
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 12/172 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GK+T+G L+ L+ F DSD+ +E+ G V +F GEA FR+ E K
Sbjct: 33 IFLVGPMGAGKSTIGRQLAQQLNMEFFDSDQEIERRTGA-DVGWVFDVEGEAGFRDREEK 91
Query: 157 ALQKLSLVPQQVVATGGGAV-VRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD-SFPL 214
+ +L+ V+ATGGG+V R R +G+ V+L ++ +++A D PL
Sbjct: 92 IINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKRPL 148
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACIGLKDVLDI 265
L DS L AL+ ER+ Y AD T+ + +A + ++++
Sbjct: 149 LQVDSPPR-----EVLEALAGERNPLYEEIADVTIRTDDQSAKVVANQIINM 195
>gi|206558685|ref|YP_002229445.1| shikimate kinase [Burkholderia cenocepacia J2315]
gi|198034722|emb|CAR50589.1| shikimate kinase I [Burkholderia cenocepacia J2315]
Length = 184
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F VG+MG+GKTTVG ++ LD TF DSD +E G + IF+ GEA FR+ E++
Sbjct: 10 VFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEIEARTGA-RIPVIFELEGEAGFRDRETQ 68
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFL 193
+ L+ V+ATGGGAV+RP N ++ GI V+L
Sbjct: 69 VIADLTQRENIVLATGGGAVLRPENRDSLKTNGIVVYL 106
>gi|387890219|ref|YP_006320517.1| shikimate kinase [Escherichia blattae DSM 4481]
gi|414594717|ref|ZP_11444352.1| shikimate kinase 2 [Escherichia blattae NBRC 105725]
gi|386925052|gb|AFJ48006.1| shikimate kinase II [Escherichia blattae DSM 4481]
gi|403194454|dbj|GAB82004.1| shikimate kinase 2 [Escherichia blattae NBRC 105725]
Length = 174
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 5/154 (3%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +FLVG G GKTT G L+ AL + F D+D ++ + T VA++ + G FR E
Sbjct: 3 QPVFLVGARGCGKTTTGNALARALGFRFTDTDLWLLETTHMT-VAEMVERDGWPGFRRRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVG-TDSF 212
S+AL+ ++ VP VVATGGG V+ N +FMR G ++L P LA R+AA D
Sbjct: 62 SEALRAVT-VPGTVVATGGGIVLAEENRQFMRDNGQVIYLRAPAHILASRLAAFPEEDQR 120
Query: 213 PLLD-YDSADSYTKAFTALSALSKERSEAYANAD 245
P L D + A AL ++ + +AD
Sbjct: 121 PTLTGRPITDEMAEVLAARDALYRQVAHHVIDAD 154
>gi|295703088|ref|YP_003596163.1| shikimate kinase [Bacillus megaterium DSM 319]
gi|294800747|gb|ADF37813.1| shikimate kinase [Bacillus megaterium DSM 319]
Length = 185
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 84/163 (51%), Gaps = 10/163 (6%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L + + +G MG GKTT+GE+++ L F D D+ +EK M +QIFKE GE +FR
Sbjct: 8 LREKSIVFIGFMGVGKTTIGELVAKKLYRDFIDIDQEIEK-MFQMPTSQIFKEFGEEFFR 66
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRF-MRQGITVFLNVPLDALARRIAAVGTD 210
E + + +LS ++++ GGGA ++ + + I FL++ D+ RI+ + D
Sbjct: 67 NKEKEVISQLSQQRLKIISVGGGAFLQEEIQKICLSNCIVFFLDLSWDSWKERISLI-ID 125
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNL 253
S P+L S + K F A+ Y+N + V NL
Sbjct: 126 SRPVLQGRSLEDIEKLFYTRQAI-------YSNHHSKVETDNL 161
>gi|423518939|ref|ZP_17495420.1| shikimate kinase [Bacillus cereus HuA2-4]
gi|401159994|gb|EJQ67373.1| shikimate kinase [Bacillus cereus HuA2-4]
Length = 165
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +++ G MG+GKTT+G++LS L D+D+ +E+ ++ IF E GE FREYE
Sbjct: 2 KSIYITGYMGAGKTTIGKVLSKELHMDVVDTDQKIEEKQ-EKAICDIFAEEGEMAFREYE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
S+ ++ L V ++ TGGG + R N ++M++ G V+L +A R+ T P
Sbjct: 61 SEMVRSLP-VQNVIITTGGGIIERAENRKWMKENGTVVYLYCDPHVIAERLREDTTR--P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
L D++ F + A Y AD + N
Sbjct: 118 LFQKKDIDAFITKFESRRAY-------YEEADIHIDTTN 149
>gi|261822555|ref|YP_003260661.1| shikimate kinase [Pectobacterium wasabiae WPP163]
gi|261606568|gb|ACX89054.1| Shikimate kinase [Pectobacterium wasabiae WPP163]
gi|385872863|gb|AFI91383.1| Shikimate kinase 2 [Pectobacterium sp. SCC3193]
Length = 173
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F+VG G GKTTVG L+ AL Y F D+D ++++ T VA + + G FR+ ES
Sbjct: 5 IFMVGARGCGKTTVGHQLAQALGYDFVDTDLFMQQTTNMT-VADVVAQEGWHGFRQRESL 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRI 204
ALQ+++ + +VATGGG V+ N RFM QGI ++L+ + LA+R+
Sbjct: 64 ALQQVT-SNRYIVATGGGMVLAEANRRFMHDQGIVIYLHANAELLAQRL 111
>gi|327405112|ref|YP_004345950.1| Shikimate kinase [Fluviicola taffensis DSM 16823]
gi|327320620|gb|AEA45112.1| Shikimate kinase [Fluviicola taffensis DSM 16823]
Length = 181
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 80/154 (51%), Gaps = 7/154 (4%)
Query: 93 DG-QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
DG Q +FL+G MGSGK+TVGE+L++ L F DSD+ +EK G S+ +IF GE FR
Sbjct: 6 DGKQHIFLIGFMGSGKSTVGELLAERLSLPFIDSDREIEK-SEGKSIDEIFSREGEKAFR 64
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTD 210
+ E L +L + VV+ GGG M Q G+ ++LN L L +R+ D
Sbjct: 65 DMELNFLVELKGLKPSVVSLGGGLPAINGALELMHQFGLVIYLNTSLLTLIQRLKN-EKD 123
Query: 211 SFPLLDYDSADSYTKAFTALSALSKERSEAYANA 244
PLL D +D+ F L +R Y A
Sbjct: 124 LRPLLK-DLSDAEFHPFV--EDLLSQRVHFYKQA 154
>gi|289524053|ref|ZP_06440907.1| shikimate kinase/3-dehydroquinate synthase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289502709|gb|EFD23873.1| shikimate kinase/3-dehydroquinate synthase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 552
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 13/153 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
L+L G M +GKT+VG L++ + F D+D VE M G SVA+IF++ GE YFR E++
Sbjct: 26 LYLGGFMAAGKTSVGRKLAELTGFPFVDTDDLVEA-MAGMSVAEIFQKYGELYFRALEAE 84
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
AL++ + +V GGG +V P N + G + L+ ++ + +R A+ PLL
Sbjct: 85 ALEETFKLKNVIVGLGGGVLVNPENKAKIFANGTLIILDAAIETILKR-ASNEPGKRPLL 143
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
+S ++ L R EAY+ A V
Sbjct: 144 KEES----------VAELMNRRREAYSKAHIRV 166
>gi|393769157|ref|ZP_10357685.1| shikimate kinase [Methylobacterium sp. GXF4]
gi|392725398|gb|EIZ82735.1| shikimate kinase [Methylobacterium sp. GXF4]
Length = 203
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 10/171 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + LVG+MG+GK+TVG L+ L F D+D +E G ++ IF GE FR+ E
Sbjct: 25 RSIVLVGLMGAGKSTVGRRLASRLGLIFKDADSEIEA-AAGLTIPDIFAIYGEPSFRDGE 83
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+ + +L V+ATGGGA +R +R+ I+V+L LD L RR+ G + P
Sbjct: 84 ERVISRLLRAGPLVLATGGGAYLREATRARIRESAISVWLKADLDVLMRRVRKRG--NRP 141
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLD 264
LL + ++ + A+ R YA AD V ++ ++DVL+
Sbjct: 142 LLHTEDPEATMRDLMAV------RHPVYAAADVVVISREVSHDRVVQDVLE 186
>gi|156936450|ref|YP_001440366.1| shikimate kinase I [Cronobacter sakazakii ATCC BAA-894]
gi|156534704|gb|ABU79530.1| hypothetical protein ESA_04351 [Cronobacter sakazakii ATCC BAA-894]
Length = 216
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 82/155 (52%), Gaps = 12/155 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GK+T+G L+ L+ F DSD+ +EK G V +F GE FR+ E K
Sbjct: 50 IFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGA-DVGWVFDVEGEEGFRDREEK 108
Query: 157 ALQKLSLVPQQVVATGGGAV-VRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD-SFPL 214
+ +L+ V+ATGGG+V R R +G+ V+L ++ +++A D PL
Sbjct: 109 VINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKRPL 165
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYAN-ADATV 248
L D T L AL+ ER+ Y AD T+
Sbjct: 166 LQVD-----TPPREVLEALANERNPLYEEIADVTI 195
>gi|418300542|ref|ZP_12912363.1| shikimate kinase [Agrobacterium tumefaciens CCNWGS0286]
gi|355533381|gb|EHH02714.1| shikimate kinase [Agrobacterium tumefaciens CCNWGS0286]
Length = 193
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 96/180 (53%), Gaps = 10/180 (5%)
Query: 85 GREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKE 144
G + + L + + VG+MG+GK+ VG +++ L F D+D +E++ +++++F
Sbjct: 13 GEQARAKLGRRNIVFVGLMGAGKSAVGRMVAQQLKVPFIDTDVEIERV-SRMTISELFAT 71
Query: 145 SGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARR 203
GE FR E++ +++L +V++TGGGA + R + R GI+ +L L+ L R
Sbjct: 72 YGEEEFRALETRVIKRLLRGGPKVISTGGGAFINDNTRRHITRGGISFWLKADLEVLWER 131
Query: 204 IAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVL 263
+ D PLL ++ + L+AL ++R YA AD T+ ++ I + +VL
Sbjct: 132 VNK--RDHRPLLKTENPKA------TLAALMEKRYPIYAEADMTIESRDVRKEIIVTEVL 183
>gi|375259277|ref|YP_005018447.1| shikimate kinase [Klebsiella oxytoca KCTC 1686]
gi|397656258|ref|YP_006496960.1| Shikimate kinase III [Klebsiella oxytoca E718]
gi|402843141|ref|ZP_10891543.1| shikimate kinase II [Klebsiella sp. OBRC7]
gi|423101542|ref|ZP_17089244.1| hypothetical protein HMPREF9686_00148 [Klebsiella oxytoca 10-5242]
gi|365908755|gb|AEX04208.1| shikimate kinase II [Klebsiella oxytoca KCTC 1686]
gi|376391330|gb|EHT04009.1| hypothetical protein HMPREF9686_00148 [Klebsiella oxytoca 10-5242]
gi|394344869|gb|AFN30990.1| Shikimate kinase III [Klebsiella oxytoca E718]
gi|402277772|gb|EJU26840.1| shikimate kinase II [Klebsiella sp. OBRC7]
Length = 175
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +FLVG G GKTT+G L+ A + FAD+D +++ T VA I ++ G FR E
Sbjct: 3 QLIFLVGPRGCGKTTIGHALAKARSFKFADTDHELQEHEQRT-VAAIVQQEGWERFRALE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAA 206
++AL++++ P ++ATGGG ++ N +FMR+ GI ++L + AL R+ A
Sbjct: 62 TQALERVAQ-PATIIATGGGIILSEYNRQFMRENGIVIYLEASVSALIDRLEA 113
>gi|350560632|ref|ZP_08929472.1| Shikimate kinase [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349782900|gb|EGZ37183.1| Shikimate kinase [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 184
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVG MG+GK+T+G L+ L +F D+D +EK G + IF+ GE FR+ E++
Sbjct: 4 VVLVGPMGAGKSTIGRGLAAVLKRSFVDADAEIEKRTG-VDIPTIFEFEGEEGFRQRETE 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPL 197
L++L V+ATGGGAV+RP N ++Q ++L VP+
Sbjct: 63 MLRELLERENIVLATGGGAVMRPENRELLKQHCVLYLRVPV 103
>gi|299768550|ref|YP_003730576.1| shikimate kinase [Acinetobacter oleivorans DR1]
gi|424744625|ref|ZP_18172916.1| shikimate kinase 1 [Acinetobacter baumannii WC-141]
gi|298698638|gb|ADI89203.1| shikimate kinase [Acinetobacter oleivorans DR1]
gi|422942838|gb|EKU37874.1| shikimate kinase 1 [Acinetobacter baumannii WC-141]
Length = 189
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G T + IF++ GE FR E+
Sbjct: 21 IYLVGPMGAGKTTVGRHLAEILGREFLDSDHEIERKTGAT-IPWIFEKEGEFGFRARETI 79
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
L +L+ V+ATGGGA+ + N F++Q GI V+L P++ +R
Sbjct: 80 VLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR 127
>gi|85058612|ref|YP_454314.1| shikimate kinase [Sodalis glossinidius str. 'morsitans']
gi|108866271|sp|Q2NVB6.1|AROL_SODGM RecName: Full=Shikimate kinase 2; Short=SK 2
gi|84779132|dbj|BAE73909.1| shikimate kinase II [Sodalis glossinidius str. 'morsitans']
Length = 174
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q LF+VG G GKTTVG+ L+ L Y FAD+D + + G T VA+I + G FR E
Sbjct: 3 QHLFMVGARGCGKTTVGQALARVLGYAFADTDDMLWRSTGKT-VAEIVAKEGWTGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTD 210
S+ L ++ VVATGGG ++ N RFMR +G V+L+ L+RR+ A D
Sbjct: 62 SEILTSVTQ-GNAVVATGGGIILSAANRRFMRARGTVVYLHATAQELSRRLRAYPED 117
>gi|421082995|ref|ZP_15543874.1| AroL [Pectobacterium wasabiae CFBP 3304]
gi|401702221|gb|EJS92465.1| AroL [Pectobacterium wasabiae CFBP 3304]
Length = 173
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F+VG G GKTTVG L+ AL Y F D+D ++++ T VA + + G FR+ ES
Sbjct: 5 IFMVGARGCGKTTVGHQLAQALGYDFVDTDLFMQQTTNMT-VADVVAQEGWHGFRQRESL 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRI 204
ALQ+++ + +VATGGG V+ N RFM QGI ++L+ + LA+R+
Sbjct: 64 ALQQVT-SNRYIVATGGGMVLAEANRRFMHDQGIVIYLHANAELLAQRL 111
>gi|431928787|ref|YP_007241821.1| shikimate kinase [Pseudomonas stutzeri RCH2]
gi|431827074|gb|AGA88191.1| shikimate kinase [Pseudomonas stutzeri RCH2]
Length = 184
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MG+GK+T+G +L+ L F DSDK +E+ G S+ IF GEA FRE E
Sbjct: 7 IILIGPMGAGKSTIGRLLAKELRLPFKDSDKEIEQRTGA-SIPLIFDVEGEAGFRERERA 65
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
A+ +L + V+ATGGGAV+R N + +R G ++L +D R + + PLL
Sbjct: 66 AIAELCQLEGVVLATGGGAVLRDENRQALRAGGRVIYLCTSVDQQLERTSR--DRNRPLL 123
Query: 216 DYDSADSYTKAFTAL 230
D S A A+
Sbjct: 124 QADDPRSVLTALMAV 138
>gi|168018755|ref|XP_001761911.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686966|gb|EDQ73352.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 326
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 63/118 (53%), Gaps = 15/118 (12%)
Query: 108 TTVGEILSDALDYTFAD----------SDKYVEKLMGGTSVAQIFKESGEAYFREYESKA 157
T G I++ LDY F D SD+ + LM +VA IF + GE +FR+ E K
Sbjct: 127 TATGVIIAQYLDYQFVDRLRHLMSLKSSDELIGDLMDYGTVADIFAKYGEEWFRKSEIKE 186
Query: 158 LQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLL 215
+ + VVA GGGA++RP NW F GI V+++VP LA+R+ G S PL
Sbjct: 187 VHE-----PFVVALGGGAMLRPENWVFQDCGIVVYIDVPPVVLAKRVVGAGVQSRPLF 239
>gi|116619905|ref|YP_822061.1| shikimate kinase [Candidatus Solibacter usitatus Ellin6076]
gi|116223067|gb|ABJ81776.1| shikimate kinase [Candidatus Solibacter usitatus Ellin6076]
Length = 176
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 73/114 (64%), Gaps = 6/114 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+++VG MG+GK+TVG L+ L ++F DSD+ +E+ S+A IF+E GEA FR E++
Sbjct: 11 IYVVGFMGAGKSTVGRHLAHHLGWSFFDSDEEIERAE-KASIASIFEERGEAEFRRIETE 69
Query: 157 AL-QKLSLVPQ---QVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIA 205
+ Q + + + V+A GGGA +P N + + GITV+L+ P + + +R+A
Sbjct: 70 IIRQHVGWIERGRPAVLALGGGAYAQPANRQLLENNGITVWLDCPFELVQQRVA 123
>gi|34541244|ref|NP_905723.1| shikimate kinase [Porphyromonas gingivalis W83]
gi|188994384|ref|YP_001928636.1| shikimate kinase [Porphyromonas gingivalis ATCC 33277]
gi|334146512|ref|YP_004509439.1| shikimate kinase [Porphyromonas gingivalis TDC60]
gi|34397560|gb|AAQ66622.1| shikimate kinase [Porphyromonas gingivalis W83]
gi|188594064|dbj|BAG33039.1| probable shikimate kinase [Porphyromonas gingivalis ATCC 33277]
gi|333803666|dbj|BAK24873.1| shikimate kinase [Porphyromonas gingivalis TDC60]
Length = 186
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+F+VG MGSGK+TVG ++D L + F D+D ++E VA IF++ GEA FR E
Sbjct: 5 IFIVGYMGSGKSTVGRKMADVLGWRFIDTDFFIENRF-RKRVADIFRDEGEAVFRRRERV 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRI 204
+++LS + ++ATGGG N M + G+T++L V + LA R+
Sbjct: 64 VIEELSGMEDAIIATGGGLPCHSDNMTLMNEAGLTLYLEVSDEVLAVRL 112
>gi|126179244|ref|YP_001047209.1| shikimate 5-dehydrogenase [Methanoculleus marisnigri JR1]
gi|125862038|gb|ABN57227.1| shikimate dehydrogenase / shikimate kinase [Methanoculleus
marisnigri JR1]
Length = 458
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 92/192 (47%), Gaps = 24/192 (12%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L G G+GKT+VG IL+D L F D+D +E+ G + +IF++ GEA+FR E +
Sbjct: 3 VVLTGFRGTGKTSVGLILADRLGLPFYDTDAMIER-RAGMPIPEIFRQHGEAHFRALERE 61
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVF-LNVPLDALARRIAAVGTDSFPLL 215
+ L + V+ TGGGAV P N +R+ VF L P + RIA G+D L
Sbjct: 62 VVAALRTA-EGVIGTGGGAVCDPANVADLRRHGRVFLLTAPPGVIVERIA--GSDRPGLT 118
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVL 275
D + + L R EAY A ACI D TP +A +++
Sbjct: 119 DLAPEEE-------VRTLLLRRKEAYLGA--------ADACI---DTGRRTPGEVA-DMI 159
Query: 276 VQAQKYLNSKRR 287
V+ Q Y N R
Sbjct: 160 VREQGYGNVTAR 171
>gi|323138458|ref|ZP_08073527.1| 3-dehydroquinate synthase [Methylocystis sp. ATCC 49242]
gi|322396254|gb|EFX98786.1| 3-dehydroquinate synthase [Methylocystis sp. ATCC 49242]
Length = 604
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 9/162 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+ + L G+ + LVGMMGSGK+ +G+ L+ + F D+D + G S+ +IF + GE
Sbjct: 25 ILAGLGGRAIVLVGMMGSGKSAIGQRLAARVGLPFVDADAEIVAAAAGMSIPEIFAKYGE 84
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRP-LNWRFMRQGITVFLNVPLDALARRIAA 206
YFR+ E + + +L Q V+ATGGGA + P R +G++++L+ L L +R+
Sbjct: 85 RYFRDGERRVIMRLLNSGQIVLATGGGAFMDPRTRERIAERGVSLWLDADLKTLMKRVRR 144
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
+ PLL D + L L + R Y AD V
Sbjct: 145 --KNDRPLLHTDDPEE------TLRRLLEARRPIYELADIRV 178
>gi|293610713|ref|ZP_06693013.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375136274|ref|YP_004996924.1| shikimate-kinase [Acinetobacter calcoaceticus PHEA-2]
gi|427424099|ref|ZP_18914236.1| shikimate kinase 1 [Acinetobacter baumannii WC-136]
gi|292827057|gb|EFF85422.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123719|gb|ADY83242.1| shikimate-kinase [Acinetobacter calcoaceticus PHEA-2]
gi|425699207|gb|EKU68826.1| shikimate kinase 1 [Acinetobacter baumannii WC-136]
Length = 189
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MG+GKTTVG L++ L F DSD +E+ G T + IF++ GE FR E+
Sbjct: 21 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKTGAT-IPWIFEKEGEFGFRTRETV 79
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARR 203
L +L+ V+ATGGGA+ + N F++Q GI V+L P++ +R
Sbjct: 80 VLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR 127
>gi|423106908|ref|ZP_17094603.1| hypothetical protein HMPREF9687_00154 [Klebsiella oxytoca 10-5243]
gi|423112791|ref|ZP_17100482.1| hypothetical protein HMPREF9689_00539 [Klebsiella oxytoca 10-5245]
gi|376389034|gb|EHT01726.1| hypothetical protein HMPREF9687_00154 [Klebsiella oxytoca 10-5243]
gi|376390285|gb|EHT02971.1| hypothetical protein HMPREF9689_00539 [Klebsiella oxytoca 10-5245]
Length = 175
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q +FLVG G GKTT+G L++A + FAD+D +++ SVA I ++ G FR E
Sbjct: 3 QLIFLVGPRGCGKTTIGHALAEARGFQFADTDHELQE-HEQRSVATIVQQEGWERFRALE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAA 206
++AL++++ P ++ATGGG ++ N +FMR+ G+ ++L + AL R+ A
Sbjct: 62 TQALERVAQ-PATIIATGGGIILSEYNRQFMRENGVVIYLEATVSALIGRLEA 113
>gi|161504427|ref|YP_001571539.1| shikimate kinase II [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|160865774|gb|ABX22397.1| hypothetical protein SARI_02538 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 181
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q L+LVG G GKTT+G L+ A + F D+D++++ SVA I ++ G FR E
Sbjct: 3 QPLYLVGPRGCGKTTIGMALAQATGFRFTDTDRWLQSY-AQMSVADIVEKEGWEGFRVRE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAA 206
+ AL+ +S P VVATGGG ++ N R+MR+ G+ ++L P+ L R+ A
Sbjct: 62 TTALEAVS-APSTVVATGGGIILTEYNRRYMRRVGVVIYLCAPVATLVNRLEA 113
>gi|238758714|ref|ZP_04619888.1| Shikimate kinase 1 [Yersinia aldovae ATCC 35236]
gi|238792888|ref|ZP_04636518.1| Shikimate kinase 1 [Yersinia intermedia ATCC 29909]
gi|238703011|gb|EEP95554.1| Shikimate kinase 1 [Yersinia aldovae ATCC 35236]
gi|238727742|gb|EEQ19266.1| Shikimate kinase 1 [Yersinia intermedia ATCC 29909]
Length = 173
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 12/172 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GK+T+G L+ L+ F DSD+ +E+ G V +F GE FR+ E K
Sbjct: 7 IFLVGPMGAGKSTIGRQLAQQLNMEFFDSDQEIERRTGA-DVGWVFDVEGEEGFRDREEK 65
Query: 157 ALQKLSLVPQQVVATGGGAV-VRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD-SFPL 214
+ +L+ V+ATGGG+V R R +G+ V+L ++ +++A D PL
Sbjct: 66 VINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKRPL 122
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACIGLKDVLDI 265
L D+ L AL+KER+ Y AD T+ + +A + ++++
Sbjct: 123 LQVDAPPR-----EVLEALAKERNPLYEEIADVTIRTDDQSAKVVANQIINM 169
>gi|452993651|emb|CCQ94823.1| Shikimate kinase [Clostridium ultunense Esp]
Length = 183
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+G MG+GKT+VG+ L++ L + + D+D +E+ G + IF GE FR+ E
Sbjct: 2 KNIILIGFMGAGKTSVGKALAERLHWKWIDTDAEIER-RAGKRIPNIFHNYGEEGFRKME 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFP 213
++ L L QV++TGGG V+R N M R G V+L L L R+ G+D P
Sbjct: 61 TEVLHHLLQSSGQVISTGGGIVLRKENRDVMVRHGKVVYLKADLPELISRLR--GSDR-P 117
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLN 252
LL D + +TA R Y A TV N
Sbjct: 118 LLQGDMEGKIKELWTA-------RKGFYDFASVTVETTN 149
>gi|437999651|ref|YP_007183384.1| shikimate kinase [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451813274|ref|YP_007449727.1| shikimate kinase [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
gi|429338885|gb|AFZ83307.1| shikimate kinase [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451779243|gb|AGF50123.1| shikimate kinase [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
Length = 211
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 81/159 (50%), Gaps = 12/159 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+GMMGSGKTT+G LS LD F D D +E G S+ IF+ GE+ FR+ E
Sbjct: 41 IFLIGMMGSGKTTIGRNLSSILDRKFIDLDLAIES-RCGVSIPTIFEIEGESGFRKREEI 99
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS-FPL 214
L S V+ATGGGAV+ N +++ GI V+ LD L +R DS PL
Sbjct: 100 VLLDCSNEINTVLATGGGAVLSHSNRDVLKKRGIVVYFQASLDDLFQR---TNLDSNRPL 156
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLN 252
L + K + L L ++R Y AD +S N
Sbjct: 157 L-----SNTDKPYAILRELLEQREPIYKEVADIIISTSN 190
>gi|257126414|ref|YP_003164528.1| shikimate kinase [Leptotrichia buccalis C-1013-b]
gi|257050353|gb|ACV39537.1| Shikimate kinase [Leptotrichia buccalis C-1013-b]
Length = 164
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 82/160 (51%), Gaps = 22/160 (13%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM GK+T+G LS ++Y D+DKY+E+ ++ IF GE YFRE E
Sbjct: 2 KNIVLIGMPACGKSTIGYWLSKKINYPILDADKYLEE-KENRVISDIFSNEGEEYFRELE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSF- 212
+K L++LS +++TGGGAV + N +++ GI VFLN R IA + ++
Sbjct: 61 TKYLKELSEKNGIIISTGGGAVKKKENIDILKKNGIVVFLN-------REIADIYKENHE 113
Query: 213 --PLLDYDSADSYTKAFTALSALSKERSEAYAN-ADATVS 249
PLL K + L ER + Y AD V
Sbjct: 114 KRPLL---------KNINNIQKLYDERIDLYRKYADIIVK 144
>gi|148260467|ref|YP_001234594.1| 3-dehydroquinate synthase [Acidiphilium cryptum JF-5]
gi|146402148|gb|ABQ30675.1| shikimate kinase [Acidiphilium cryptum JF-5]
Length = 552
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L + + L+G+MG+GK+ VG L+ L F DSD +E G T VA IF GEA F
Sbjct: 14 ALPMRSIVLIGLMGAGKSAVGRRLAAQLALPFHDSDAEIEAAAGKT-VADIFASEGEAAF 72
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGT 209
R E + +L P V+ATGGGA + P + + I+V+L LD L R+ G
Sbjct: 73 RARERAMIAELLAGPPIVLATGGGAFMDPETRAVIGARAISVWLRATLDVLLARVR--GR 130
Query: 210 DSFPLLDY-DSADSYTKAFTALSALSKERSEAYANADATV 248
PLL+ D A+ LS LS R+ YA AD V
Sbjct: 131 THRPLLNQGDPAE-------ILSRLSALRAPVYAEADIIV 163
>gi|451343308|ref|ZP_21912381.1| hypothetical protein HMPREF9943_00606 [Eggerthia catenaformis OT
569 = DSM 20559]
gi|449337888|gb|EMD17043.1| hypothetical protein HMPREF9943_00606 [Eggerthia catenaformis OT
569 = DSM 20559]
Length = 173
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 14/146 (9%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+GMMG GK+T+G +L++ + Y + D D Y+E T + ++F S E YFR+ E++
Sbjct: 4 IILIGMMGCGKSTIGRMLAERISYQYIDMDTYLENKYHST-IPELFSVS-ELYFRDKETE 61
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
+ + ++++TGGG ++R N +++ G+ F++ P++ + I + TD PLL
Sbjct: 62 CCKDMGHTDNKIISTGGGVILREENMLYLKNNGLVFFIDRPVEMI---INELNTDHRPLL 118
Query: 216 DYDSADSYTKAFTALSALSKERSEAY 241
L L KER Y
Sbjct: 119 --------KDGVFKLYDLEKERRSLY 136
>gi|389581074|ref|ZP_10171101.1| shikimate kinase [Desulfobacter postgatei 2ac9]
gi|389402709|gb|EIM64931.1| shikimate kinase [Desulfobacter postgatei 2ac9]
Length = 179
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL+G +GKT+ G+ L+D L+ TF D+D +E G T++AQ+ G AYFR E++
Sbjct: 4 IFLIGYRCTGKTSTGKYLADLLNKTFLDTDLVLESTYG-TTIAQMVGRHGWAYFRAKETQ 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIA--AVGTDSFP 213
L L L V+ATGGG ++ N +F+++ GI V+L L RI+ TD P
Sbjct: 63 TLMNLDLKNSPVIATGGGIILAEENRQFLKENGIVVYLYATASVLTDRISKDENNTDRRP 122
Query: 214 LLDYDS 219
L DS
Sbjct: 123 DLTRDS 128
>gi|238788959|ref|ZP_04632749.1| Shikimate kinase 1 [Yersinia frederiksenii ATCC 33641]
gi|238722986|gb|EEQ14636.1| Shikimate kinase 1 [Yersinia frederiksenii ATCC 33641]
Length = 173
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 12/172 (6%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FLVG MG+GK+T+G L+ L+ F DSD+ +E+ G V +F GE FR+ E K
Sbjct: 7 IFLVGPMGAGKSTIGRQLAQQLNMEFFDSDQEIERRTGA-DVGWVFDVEGEEGFRDREEK 65
Query: 157 ALQKLSLVPQQVVATGGGAV-VRPLNWRFMRQGITVFLNVPLDALARRIAAVGTD-SFPL 214
+ +L+ V+ATGGG+V R R +G+ V+L ++ +++A D PL
Sbjct: 66 IINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKRPL 122
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACIGLKDVLDI 265
L DS L AL++ER+ Y AD T+ + +A + ++++
Sbjct: 123 LQVDSPPR-----EVLEALARERNPLYEEIADVTIRTDDQSAKVVANQIINM 169
>gi|115312157|sp|Q2G733.2|AROK_NOVAD RecName: Full=Shikimate kinase; Short=SK
Length = 193
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 79/156 (50%), Gaps = 14/156 (8%)
Query: 94 GQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREY 153
G+ L LVGMMG GKTTVG L+ L F D+D+ +E+ + +IF GE YFR+
Sbjct: 21 GRPLVLVGMMGVGKTTVGRKLASLLHVPFVDADEEIER-AAHMPIPEIFATYGEPYFRDG 79
Query: 154 ESKALQKL----SLVPQQVVATGGGAVVRPLNWRF-MRQGITVFLNVPLDALARRIAAVG 208
E + + +L ++V++TGGGA P + +GI V+L+ +D L R+
Sbjct: 80 ERRVIARLMGTGRNTDRKVLSTGGGAFCDPATRALILERGIAVWLDSDVDTLVERVGR-- 137
Query: 209 TDSFPLLDYDSADSYTKAFTALSALSKERSEAYANA 244
D+ PLL + L+ L ER YA A
Sbjct: 138 KDNRPLLKTGNPREI------LTRLKDEREPFYAQA 167
>gi|329118842|ref|ZP_08247538.1| shikimate kinase [Neisseria bacilliformis ATCC BAA-1200]
gi|327465033|gb|EGF11322.1| shikimate kinase [Neisseria bacilliformis ATCC BAA-1200]
Length = 172
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 11/154 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
LFL+G+MG+GKTT+G L+ L+ F DSD+ + + G SV IF+ GEA FR E+
Sbjct: 8 LFLIGLMGAGKTTLGRRLAAQLNRAFYDSDQVICERTG-VSVPTIFEMEGEAGFRAREAA 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
+ +LS + V+ATGGGAV+R N R + +G ++L+ + L R + + PLL
Sbjct: 67 VINELSALSGIVLATGGGAVLREENRRCLAARGTVIYLHAAPEILLERTRS--DKNRPLL 124
Query: 216 DYDSADSYTKAFTALSALSKERSEAY-ANADATV 248
AD K L AL R Y A AD V
Sbjct: 125 QV--ADPLAK----LRALYHARDPLYRAAADLVV 152
>gi|383784728|ref|YP_005469298.1| shikimate kinase [Leptospirillum ferrooxidans C2-3]
gi|383083641|dbj|BAM07168.1| putative shikimate kinase [Leptospirillum ferrooxidans C2-3]
Length = 189
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 78/146 (53%), Gaps = 8/146 (5%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVG GSGKTT+G L+ D F D+D+ VE+++ ++ + GE FR ES
Sbjct: 14 ILLVGPRGSGKTTIGHSLARVRDLAFYDTDRMVEEVIR-EPISTFWAREGEPSFRNLESG 72
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGTDSFPLL 215
LQKL V VV+TGGG V+ P N + + G+ ++L+V +D L R++ G +S P L
Sbjct: 73 VLQKLPGVKAGVVSTGGGIVLSPANRELISKMGLVLYLSVSVDVLEGRLSHWG-NSRPRL 131
Query: 216 DYDSADSYTKAFTALSALSKERSEAY 241
+ S A T +ER Y
Sbjct: 132 NPQIPLSEEIALTV-----RERDPLY 152
>gi|326403660|ref|YP_004283742.1| shikimate kinase/3-dehydroquinate synthase [Acidiphilium multivorum
AIU301]
gi|325050522|dbj|BAJ80860.1| shikimate kinase/3-dehydroquinate synthase [Acidiphilium multivorum
AIU301]
Length = 552
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 91 CLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYF 150
L + + L+G+MG+GK+ VG L+ L F DSD +E G T VA IF GEA F
Sbjct: 14 ALPMRSIVLIGLMGAGKSAVGRRLAAQLALPFHDSDAEIEAAAGKT-VADIFASEGEAAF 72
Query: 151 REYESKALQKLSLVPQQVVATGGGAVVRPLNWRFM-RQGITVFLNVPLDALARRIAAVGT 209
R E + +L P V+ATGGGA + P + + I+V+L LD L R+ G
Sbjct: 73 RARERAMIAELLAGPPIVLATGGGAFMDPETRAVIGARAISVWLRATLDVLLARVR--GR 130
Query: 210 DSFPLLDY-DSADSYTKAFTALSALSKERSEAYANADATV 248
PLL+ D A+ LS LS R+ YA AD V
Sbjct: 131 THRPLLNQGDPAE-------ILSRLSALRAPVYAEADIIV 163
>gi|298369929|ref|ZP_06981245.1| shikimate kinase [Neisseria sp. oral taxon 014 str. F0314]
gi|298281389|gb|EFI22878.1| shikimate kinase [Neisseria sp. oral taxon 014 str. F0314]
Length = 174
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 74/138 (53%), Gaps = 15/138 (10%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
LF VG+MG+GKTT+G ++ LD F DSD + K G S++ IF+ GE FR E+
Sbjct: 11 LFFVGLMGAGKTTLGRHIAKTLDRPFYDSDHEICKC-SGVSISTIFEVEGEQGFRSRETA 69
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
L+KL+ + V++TGGGAV+R N +R G ++L+ + L R S PLL
Sbjct: 70 MLKKLAAMKNIVLSTGGGAVLREENRICLRNNGTVIYLHACPETLLERTRH--DTSRPLL 127
Query: 216 D-----------YDSADS 222
YDS D+
Sbjct: 128 QVENPLAKLRELYDSRDA 145
>gi|237750220|ref|ZP_04580700.1| shikimate kinase [Helicobacter bilis ATCC 43879]
gi|229374114|gb|EEO24505.1| shikimate kinase [Helicobacter bilis ATCC 43879]
Length = 170
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 15/150 (10%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MGSGK+T+ ++L+ AL+ F DSD Y+ K +SV IF GEAYFR ES
Sbjct: 4 IILIGFMGSGKSTIAKLLATALNMPFIDSDTYIAK-KEKSSVKDIFTYKGEAYFRHLESL 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRI--AAVGTDSFPL 214
++ S ++ATGGG P+ G+ +L D + +RI A ++ PL
Sbjct: 63 FIESFSTQKGYIIATGGGM---PIFNNVRGLGVCFYLQSDFDTITQRILKEATKENTRPL 119
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYANA 244
D + AL ER + Y N+
Sbjct: 120 FD---------DISTAKALYNERIKIYENS 140
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,276,387,483
Number of Sequences: 23463169
Number of extensions: 174577463
Number of successful extensions: 705814
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2727
Number of HSP's successfully gapped in prelim test: 1608
Number of HSP's that attempted gapping in prelim test: 698567
Number of HSP's gapped (non-prelim): 4387
length of query: 287
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 146
effective length of database: 9,050,888,538
effective search space: 1321429726548
effective search space used: 1321429726548
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)