BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023118
(287 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5NTH3|SK2_ORYSJ Shikimate kinase 2, chloroplastic OS=Oryza sativa subsp. japonica
GN=SK2 PE=1 SV=1
Length = 307
Score = 245 bits (625), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/231 (54%), Positives = 169/231 (73%), Gaps = 4/231 (1%)
Query: 52 LVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVG 111
L P + K S HD + +S+D LLK K EV L+G+C++LVGMMGSGK+TV
Sbjct: 56 LAPLYCLKASRGHD----SLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVA 111
Query: 112 EILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVAT 171
+IL++ L Y+F DSDK VE+ +G SVAQIFKE EA+FR+ ES L+ LS + + VVAT
Sbjct: 112 KILAEVLGYSFFDSDKLVEQAVGMPSVAQIFKEHSEAFFRDNESSVLRDLSSMRRLVVAT 171
Query: 172 GGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALS 231
GGGAV+RP+NW++M++G++V+L+VPLDALARRIA VGT S PLLD S+D YT AF+ LS
Sbjct: 172 GGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAQVGTASRPLLDQPSSDPYTAAFSKLS 231
Query: 232 ALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
L+++R +AYANADA VSL +AA G DV +TPT IA+E L++ + ++
Sbjct: 232 MLAEQRGDAYANADARVSLEEIAAKQGHDDVSKLTPTDIAIEALLKIENFV 282
>sp|Q5NTH4|SK1_ORYSJ Shikimate kinase 1, chloroplastic OS=Oryza sativa subsp. japonica
GN=SK1 PE=1 SV=1
Length = 308
Score = 238 bits (606), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/231 (52%), Positives = 164/231 (70%), Gaps = 4/231 (1%)
Query: 52 LVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVG 111
+ P K S H+ T +S+D LLK K EV L+G+C++LVGMMGSGK+TVG
Sbjct: 58 VAPLRAKKSSGGHE----TLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVG 113
Query: 112 EILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVAT 171
+I+S+ L Y+F DSDK VE+ +G SVAQIFK EA+FR+ ES L+ LS + + VVAT
Sbjct: 114 KIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVAT 173
Query: 172 GGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALS 231
GGGAV+RP+NW++M++G++V+L+VPLDALARRIA VGT S PLLD S D YT AF+ LS
Sbjct: 174 GGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQPSGDPYTMAFSKLS 233
Query: 232 ALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYL 282
L+++R +AYANAD VSL +A+ G DV +TPT IA+E + + ++
Sbjct: 234 MLAEQRGDAYANADVRVSLEEIASKQGHDDVSKLTPTDIAIESFHKIENFV 284
>sp|Q9SJ05|SK1_ARATH Shikimate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=SK1
PE=1 SV=2
Length = 303
Score = 231 bits (589), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 151/206 (73%)
Query: 80 LLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVA 139
+LK K EV L+G+ ++LVGMMGSGKTTVG+++S L YTF D D +E+ M GTSVA
Sbjct: 88 ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVA 147
Query: 140 QIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDA 199
+IF GE +FR E+ AL+KLS Q VV+TGGGAV+RP+NW++M +GI+++L+VPL+A
Sbjct: 148 EIFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEA 207
Query: 200 LARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL 259
LA RIAAVGTDS PLL +S D+Y+ AF LSA+ ER EAY NA+A VSL N+AA G
Sbjct: 208 LAHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGY 267
Query: 260 KDVLDITPTTIAMEVLVQAQKYLNSK 285
K+V D+TPT IA+E Q +L +
Sbjct: 268 KNVSDLTPTEIAIEAFEQVLSFLEKE 293
>sp|Q8GY88|SK2_ARATH Shikimate kinase 2, chloroplastic OS=Arabidopsis thaliana GN=SK2
PE=1 SV=1
Length = 300
Score = 228 bits (580), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/275 (46%), Positives = 179/275 (65%), Gaps = 11/275 (4%)
Query: 17 GGEIGSFNQNCKRQQTQQHF--INLNPLKLKRHRTLNLVPAHVSKDSNAHDVESGTFCDS 74
G GS N +R + + F + L K + HR + VS +++ +E+G+ S
Sbjct: 22 GKPRGSLRYNTQRIKEDKRFRVVALTLDKRRDHRLRS-----VSDKNSSALLETGSLLHS 76
Query: 75 L--DGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKL 132
+ + +LK K EV L+G+ ++LVGMMGSGKTTVG+I++ +L YTF D D +E+
Sbjct: 77 PFDEEQQILKKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARSLGYTFFDCDTLIEQA 136
Query: 133 MGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQ-VVATGGGAVVRPLNWRFMRQGITV 191
M GTSVA+IF+ GE+ FRE E++AL+KLSL+ Q VV+TGGGAV+RP+NW++M +GI++
Sbjct: 137 MKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVIRPINWKYMHKGISI 196
Query: 192 FLNVPLDALARRIAAVGTDSFPLL-DYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
+L+VPL+ALA RIAAVGT S PLL D +S D+YT A LS + R EAY A A VSL
Sbjct: 197 WLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWDARGEAYTKASARVSL 256
Query: 251 LNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSK 285
N+ +G + V D+TP IA+E Q Q YL +
Sbjct: 257 ENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEKE 291
>sp|Q00497|SK_SOLLC Shikimate kinase, chloroplastic OS=Solanum lycopersicum GN=SK PE=1
SV=1
Length = 300
Score = 227 bits (579), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 157/228 (68%), Gaps = 1/228 (0%)
Query: 59 KDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDAL 118
++ A +ESG F S+D LK K EV LDG+C++LVGMMG GKTTVG IL++ L
Sbjct: 69 QNVQASVLESGCFSASIDEIETLKNKAEEVEEYLDGRCVYLVGMMGCGKTTVGRILAETL 128
Query: 119 DYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVR 178
Y+F D D+ +E+ +GG +VA+IF+ GE++FR+ E++ L KLSL+ + VV+TGGGAVVR
Sbjct: 129 GYSFFDCDRLIEQAVGGITVAEIFELRGESFFRDNETEVLHKLSLMHRLVVSTGGGAVVR 188
Query: 179 PLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERS 238
P+NWR M +GI+V+L+VPL+ALA+RI GT S PLL +S D Y L+ L + R
Sbjct: 189 PINWRHMHKGISVWLDVPLEALAKRITTEGTKSRPLLHEESGDVYDTTLKRLTTLMETRG 248
Query: 239 EAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSKR 286
E YANA A VSL N+A KDV ITP I +EVL+Q + +L +++
Sbjct: 249 ENYANASARVSLENIAL-KREKDVCHITPAEITLEVLIQIENFLKTQK 295
>sp|Q7X7H9|SK3_ORYSJ Shikimate kinase 3, chloroplastic OS=Oryza sativa subsp. japonica
GN=SK3 PE=1 SV=2
Length = 287
Score = 227 bits (578), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 158/212 (74%)
Query: 74 SLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLM 133
S D +LK K +V L+ +C++LVGMMGSGKTTVG+IL++ L Y+F DSDK VEK +
Sbjct: 71 SADEALVLKQKAEDVVPYLNDRCIYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAV 130
Query: 134 GGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFL 193
G +SVA+IF+ EA+FR+ ES+ L+ LS + + VVATGGGAV+RP+NW +M++G T++L
Sbjct: 131 GISSVAEIFQLHSEAFFRDNESEVLRDLSSMHRLVVATGGGAVIRPINWSYMKKGSTIWL 190
Query: 194 NVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNL 253
+VPLDALARRIAAVGT S PLL +S D Y KA+ L+AL ++R ++YANADA VSL ++
Sbjct: 191 DVPLDALARRIAAVGTASRPLLHQESGDPYAKAYAKLTALFEQRMDSYANADARVSLEHI 250
Query: 254 AACIGLKDVLDITPTTIAMEVLVQAQKYLNSK 285
A G +V +TP+ IA+E L++ + +L K
Sbjct: 251 AVKQGHSNVTTLTPSAIAIEALLKMESFLTEK 282
>sp|Q5N4D3|AROK_SYNP6 Shikimate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301
/ SAUG 1402/1) GN=aroK PE=3 SV=1
Length = 190
Score = 134 bits (337), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 120/184 (65%), Gaps = 10/184 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+ + L+G LFLVG+MGSGKTT+G++L+++L YT+ D+D +E + G S+ +IF GE
Sbjct: 3 LVTALNGLDLFLVGLMGSGKTTIGKLLAESLGYTYVDTDSLIENVTG-RSIPEIFASDGE 61
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
A FR+ E++ L++++ + VVATGGG V+RP NW +++QG+ ++L+VP+ L RR+
Sbjct: 62 AGFRQIETQVLEEVASYRRLVVATGGGIVIRPENWSYLQQGLVIWLDVPIPELLRRLE-- 119
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL-LNLAACIGLKDVLDIT 266
G + PLL ++ T L AL ++R + YA AD +++ + + ++ +L++
Sbjct: 120 GDQNRPLLQTEA------PATTLQALWEQRRDRYAQADLRIAIEASEDPEVTMQRILEVI 173
Query: 267 PTTI 270
P+ +
Sbjct: 174 PSVL 177
>sp|Q31PU5|AROK_SYNE7 Shikimate kinase OS=Synechococcus elongatus (strain PCC 7942)
GN=aroK PE=3 SV=1
Length = 190
Score = 134 bits (337), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 120/184 (65%), Gaps = 10/184 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+ + L+G LFLVG+MGSGKTT+G++L+++L YT+ D+D +E + G S+ +IF GE
Sbjct: 3 LVTALNGLDLFLVGLMGSGKTTIGKLLAESLGYTYVDTDSLIENVTG-RSIPEIFASDGE 61
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
A FR+ E++ L++++ + VVATGGG V+RP NW +++QG+ ++L+VP+ L RR+
Sbjct: 62 AGFRQIETQVLEEVASYRRLVVATGGGIVIRPENWSYLQQGLVIWLDVPIPELLRRLE-- 119
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL-LNLAACIGLKDVLDIT 266
G + PLL ++ T L AL ++R + YA AD +++ + + ++ +L++
Sbjct: 120 GDQNRPLLQTEA------PATTLQALWEQRRDRYAQADLRIAIEASEDPEVTMQRILEVI 173
Query: 267 PTTI 270
P+ +
Sbjct: 174 PSVL 177
>sp|B0JFW8|AROK_MICAN Shikimate kinase OS=Microcystis aeruginosa (strain NIES-843)
GN=aroK PE=3 SV=1
Length = 190
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 110/182 (60%), Gaps = 10/182 (5%)
Query: 90 SCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAY 149
+ L G +FL+GMMGSGK+T+GE+LS L Y F D+D +E+ + G + +IF + GEA
Sbjct: 8 NSLRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFVDEGEAT 66
Query: 150 FREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGT 209
FRE E++ L +LS + + V+ATGGG V++P+NW ++R G+ ++L+VPL+ L +R+
Sbjct: 67 FRELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEILVKRLKQ--D 124
Query: 210 DSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGL-KDVLDITPT 268
S PLL DS L L ++R YA AD + + +L + + +L PT
Sbjct: 125 TSRPLLQSTDLDS------KLELLLEQRRGLYAEADLRIVVSDLDTPTDIVEKILTAIPT 178
Query: 269 TI 270
I
Sbjct: 179 VI 180
>sp|Q2JKT7|AROK_SYNJB Shikimate kinase OS=Synechococcus sp. (strain JA-2-3B'a(2-13))
GN=aroK PE=3 SV=1
Length = 187
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 99/164 (60%), Gaps = 8/164 (4%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
E L G ++L+GMMGSGK+TVG L+ L + F D+D VE++ GG+S+AQIF E G
Sbjct: 5 EEVERLRGVNVYLIGMMGSGKSTVGSELAAQLRFQFFDTDGLVEQV-GGSSIAQIFAEHG 63
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAA 206
EAYFR+ E++ L +LS + V+ATGGG V+RP NW ++ G+TV+L+V + + +R+
Sbjct: 64 EAYFRDLETQVLAQLSSYTRLVIATGGGIVLRPKNWSYLHHGLTVWLDVAPELIWQRLKR 123
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL + AL L +ER YA AD V +
Sbjct: 124 -DPGQRPLLQTPDPQA------ALYKLMQEREPFYAQADVRVPI 160
>sp|Q7VE85|AROK_PROMA Shikimate kinase OS=Prochlorococcus marinus (strain SARG / CCMP1375
/ SS120) GN=aroK PE=3 SV=1
Length = 190
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 100/170 (58%), Gaps = 9/170 (5%)
Query: 82 KAKGREVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQI 141
K + +V L G+ ++LVGMMGSGK+T G L+ L Y+F D D+ +EK + +SV+QI
Sbjct: 4 KLRPNQVIKKLGGRIIYLVGMMGSGKSTTGPHLAKLLKYSFIDQDELIEK-VAKSSVSQI 62
Query: 142 FKESGEAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALA 201
F+E GE FR+ E++ L+++ VVATGGG V R NW + QGI ++L+ + L
Sbjct: 63 FREEGENGFRDIETQVLKQIGQRHSLVVATGGGLVTRSENWGVLHQGIVIWLDPNRELLF 122
Query: 202 RRIAAVGTDSFPLLD-YDSADSYTKAFTALSALSKERSEAYANADATVSL 250
R+ + T PLLD D D L +L K+R +YA AD +S+
Sbjct: 123 ARLKSDKTVVRPLLDNKDPKD-------VLDSLIKQRYLSYAEADLHISI 165
>sp|Q2JRJ6|AROK_SYNJA Shikimate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=aroK
PE=3 SV=1
Length = 189
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 95/164 (57%), Gaps = 8/164 (4%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
E A L G ++L+GMM SGK+T+G L+ L F D+D VE++ G S+AQIF E G
Sbjct: 5 EEAERLRGVTVYLIGMMASGKSTLGAELAAQLRRPFFDTDALVEQV-AGCSIAQIFAEQG 63
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAA 206
EA+FRE E++ L +LS + VVATGGG V+RP NW ++ G+TV+L+ + + +R+
Sbjct: 64 EAHFRELETQVLAQLSGYTRLVVATGGGIVLRPKNWSYLHHGLTVWLDAAPELIWQRLKR 123
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL + AL L +ER YA AD V +
Sbjct: 124 -DPGQRPLLQTPDPQA------ALQRLMQEREPFYAQADVRVPI 160
>sp|Q3AH55|AROK_SYNSC Shikimate kinase OS=Synechococcus sp. (strain CC9605) GN=aroK PE=3
SV=1
Length = 199
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 91/157 (57%), Gaps = 8/157 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ L+LVGMMGSGKT+ G L++ L Y F D+D +E+ G S+ +IF+ G+A FR
Sbjct: 20 LSGRSLYLVGMMGSGKTSTGRPLAERLGYGFVDADAVIEQ-AAGCSIPEIFERDGDAGFR 78
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
ES+ L +S VVATGGG V +P NW + GI ++L+V D L +R+ A T
Sbjct: 79 SLESQVLSAISQRHSLVVATGGGVVTQPENWGLLHSGIVIWLDVVPDQLLQRLNADST-V 137
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
PLL T +L+AL ER Y+ AD TV
Sbjct: 138 RPLL------QTTDPEASLNALLNERRPLYSEADLTV 168
>sp|Q7U469|AROK_SYNPX Shikimate kinase OS=Synechococcus sp. (strain WH8102) GN=aroK PE=3
SV=1
Length = 191
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 103/180 (57%), Gaps = 10/180 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ L+LVGMMGSGKT+ G L++ L Y F D+D +E+ G S+ +IF+ GEA FR
Sbjct: 12 LGGRSLYLVGMMGSGKTSTGRPLAEQLGYGFVDADAVIEQ-AAGCSIPEIFERDGEAGFR 70
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
ES+ L + VVATGGG V + NW + GI V+L+V + L +R+ A T
Sbjct: 71 ALESQVLNAIGQRHSLVVATGGGVVTQQENWGLLHSGIVVWLDVVPEQLMQRLRADST-V 129
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKD-VLDITPTTI 270
PLL + D+ AL+AL +R YA AD TV ++N + + D +L + P+ +
Sbjct: 130 RPLLQTEDPDA------ALNALLNQRRPLYAEADLTV-VINQETPLAVADGILQLLPSLL 182
>sp|A5GQN5|AROK_SYNR3 Shikimate kinase OS=Synechococcus sp. (strain RCC307) GN=aroK PE=3
SV=1
Length = 195
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 89/158 (56%), Gaps = 8/158 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G L+LVGMMGSGK+TVG +L+ AL Y F D+D + + G S+ +IF+ GE FR
Sbjct: 14 LQGTNLYLVGMMGSGKSTVGPLLAKALGYRFLDADAVISQ-AAGCSIPEIFERDGEEGFR 72
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ E + LQ+LS VVATGGG V P NW +RQG+ ++L+V + L RR+ A
Sbjct: 73 QLERQVLQQLSQWHSLVVATGGGIVTVPANWGELRQGVVIWLDVAEEELMRRLQA-DPGG 131
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
PLL D L L ++R Y AD VS
Sbjct: 132 RPLLAGDDPAGR------LHGLLEKRQPLYGQADLRVS 163
>sp|Q8YXG9|AROK_NOSS1 Shikimate kinase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=aroK PE=3 SV=1
Length = 181
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 20/188 (10%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
++S L G L+L+GMMG+GKTTVG +L+ L Y F D+D + + S+ +IF E+GE
Sbjct: 1 MSSLLQGVNLYLIGMMGAGKTTVGHLLAKELGYGFLDTDNVIAQATK-KSINEIFAEAGE 59
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
A FR+ ES L ++ + VATGGG V+R NW ++ G+ ++L+VP+D L R+AA
Sbjct: 60 AGFRQIESDVLAQVCSYTKLTVATGGGIVLRRENWSYLHHGLILWLDVPVDILYARLAAD 119
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITP 267
T PLL D L +L ++R+ Y+ AD L C+ ++ TP
Sbjct: 120 TTR--PLLQDDDPKG------KLRSLLEQRTPLYSQAD-------LRICVNAEE----TP 160
Query: 268 TTIAMEVL 275
IA +V+
Sbjct: 161 EQIANKVM 168
>sp|Q9LW20|SKL1_ARATH Probable inactive shikimate kinase like 1, chloroplastic
OS=Arabidopsis thaliana GN=SKL1 PE=2 SV=1
Length = 280
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 124/235 (52%), Gaps = 13/235 (5%)
Query: 52 LVPAHVSKDSNAHDVESGTFCDSLDGKWLLKAKGREVASCLDGQCLFLVGMMGSGKTTVG 111
+ P+ D +A S D +D ++K K ++A L G +FLVG+ S KT G
Sbjct: 50 IAPSRSLADQSASTGISVVDSDPID---VVKRKAMDIAPELKGASIFLVGINNSIKTNTG 106
Query: 112 EILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESKALQKLSLVPQQVVAT 171
++L++AL Y + DSD + + GG AQ KE+ E F+E E++ L++LS + + VV
Sbjct: 107 KLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAFQESETEVLKQLSSMGRLVVCA 166
Query: 172 GGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDSFPLLDYDSADSYTKAFTALS 231
G GAV N +R GI+++++VPLD I A G D D ++ + F L
Sbjct: 167 GDGAVQSLRNLALLRHGISIWIDVPLD-----ITAKGDD-----DSFHSEPSPELFDTLK 216
Query: 232 ALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAMEVLVQAQKYLNSKR 286
A ++ + Y AD ++SL +A + +D+ +T IA+E+L + +K K+
Sbjct: 217 ASYEKSRKGYETADVSISLEKIATKLEFEDLEAVTSEDIALEILKEIEKLTRVKK 271
>sp|Q3MFQ9|AROK_ANAVT Shikimate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC
7937) GN=aroK PE=3 SV=1
Length = 181
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 105/188 (55%), Gaps = 20/188 (10%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
++S L G L+L+GMMG+GKTTVG +L+ L Y F D+D + + S+ +IF E+GE
Sbjct: 1 MSSLLQGVNLYLIGMMGAGKTTVGHLLAQELGYGFLDTDNVIAQ-AAKKSINEIFAEAGE 59
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
A FR+ ES L ++ + VATGGG V+R NW ++ G+ V+L+V +D L R+AA
Sbjct: 60 AGFRQIESDVLAQVCSYTKLTVATGGGIVLRRENWSYLHHGLIVWLDVSVDILYARLAAD 119
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITP 267
T PLL D L +L ++R+ Y+ AD L C+ ++ TP
Sbjct: 120 TTR--PLLQDDDPKG------KLRSLLEQRTPLYSQAD-------LRICVNAEE----TP 160
Query: 268 TTIAMEVL 275
IA +++
Sbjct: 161 EQIANKIM 168
>sp|Q3B009|AROK_SYNS9 Shikimate kinase OS=Synechococcus sp. (strain CC9902) GN=aroK PE=3
SV=1
Length = 191
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 97/179 (54%), Gaps = 8/179 (4%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ ++L+GMMGSGKT+ G L+ L Y F D+D +E++ G T + +IF+ GEA FR
Sbjct: 12 LSGRSIYLIGMMGSGKTSTGRPLAKRLGYGFVDADAVIEQVAGCT-IPEIFERDGEAGFR 70
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
ES+ L +S VVATGGG V +P NW + GI V+L+V L R+ T
Sbjct: 71 SIESQVLNAISQRHSLVVATGGGVVTKPENWGQLHSGIVVWLDVNRAQLIERLRDDSTQR 130
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTI 270
PLL + ++ AL L +ER Y AD TV + + + +L + PT I
Sbjct: 131 -PLLQQPNPEA------ALDTLLQERRPLYGEADLTVVIKDESPDAVADGILQLLPTLI 182
>sp|Q7NH27|AROK_GLOVI Shikimate kinase OS=Gloeobacter violaceus (strain PCC 7421) GN=aroK
PE=3 SV=1
Length = 177
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 8/166 (4%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G L+LVGMMGSGK+TVG +L++ L Y F D D +E+ + G V +IF+ GEA FR
Sbjct: 2 LKGVSLYLVGMMGSGKSTVGRLLAEKLGYGFVDLDALIEQ-VSGKRVGEIFEREGEAVFR 60
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ ES+ L ++S + VVATGGG V+ NW ++ G+ V+L+ ++ L R+ +
Sbjct: 61 DLESRVLAEVSAYTRLVVATGGGVVLARRNWGYLHHGVVVWLDADIETLLGRVEHE-PGT 119
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACI 257
PLL D + + L L ER+ YA AD VS L +
Sbjct: 120 RPLL--AGGDRHLR----LVELLGERARLYAQADVRVSAAGLPPAV 159
>sp|P72796|AROK_SYNY3 Shikimate kinase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=aroK PE=3 SV=1
Length = 189
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 94/163 (57%), Gaps = 9/163 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
+ L G LFL+GMMGSGK+TVG +L++ L Y F D+D +E+ + G ++A IF E GE
Sbjct: 6 IKEQLQGVNLFLIGMMGSGKSTVGPLLAEQLGYRFFDADVLIER-VAGKAIADIFAEDGE 64
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
FR+ E++ L L+ + V+ATGGG V+R NW ++ G+ ++L+ L+ L R+
Sbjct: 65 DTFRDLETEVLGHLAAQTRSVIATGGGVVLRRQNWSYLHHGLVIWLDGSLELLLARLQ-- 122
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
G ++ PLL ++ + L L +R YA AD L
Sbjct: 123 GDEARPLLQVENLEER------LGNLLAQRQPLYAQADLRFPL 159
>sp|Q8DKH7|AROK_THEEB Shikimate kinase OS=Thermosynechococcus elongatus (strain BP-1)
GN=aroK PE=3 SV=1
Length = 183
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 94/184 (51%), Gaps = 20/184 (10%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G ++LVGMMG+GKTT G +L+ L Y+F D+D + + +IF + GE FR
Sbjct: 7 LGGANIYLVGMMGAGKTTTGRLLAQRLGYSFVDTDAVITAFRQ-RPIREIFAQEGEPAFR 65
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
E E + L ++S VVATGGG V+ P+NW ++ GI V+L+VPL L +R+
Sbjct: 66 ELEQQVLAQVSSYHHLVVATGGGIVLNPMNWSYLHHGIVVWLHVPLAVLCQRLRQ--DRE 123
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIA 271
PLL + L L + R YA AD + L+ L+ TP T+
Sbjct: 124 RPLLQEQPLEE------RLGELLQARQHLYAQAD-----------LELRITLEDTPETVC 166
Query: 272 MEVL 275
+L
Sbjct: 167 DRLL 170
>sp|B2IX35|AROK_NOSP7 Shikimate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=aroK PE=3 SV=1
Length = 181
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 96/163 (58%), Gaps = 9/163 (5%)
Query: 88 VASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGE 147
++S L G L+L+GMMG GKTTVG +L+ L Y F D D + K S+ Q+F E GE
Sbjct: 1 MSSLLQGVNLYLIGMMGVGKTTVGPLLAKHLGYGFLDLDGVIAKATD-KSINQLFAEEGE 59
Query: 148 AYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAV 207
A FR+ ES L ++ + +ATGGG V+R NW ++ G+ V+L+VP++ + RR+A
Sbjct: 60 AGFRQIESDVLSQVCAFTKLTIATGGGIVLRRENWGYLHHGLIVWLDVPVELIYRRLAED 119
Query: 208 GTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
T PLL AD K L +L ++R+ Y+ AD +++
Sbjct: 120 TTR--PLL--QDADLKGK----LRSLLEQRTPLYSQADLHITV 154
>sp|A2C650|AROK_PROM3 Shikimate kinase OS=Prochlorococcus marinus (strain MIT 9303)
GN=aroK PE=3 SV=1
Length = 192
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ L+LVGMM SGK++ G L++ L Y F D+D +E+L G + +IF E GE FR
Sbjct: 14 LGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQL-AGQPIPKIFNEEGEEGFR 72
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
ES+ L + VVATGGG V +P NW + QGI ++LN + L RR+ A + +
Sbjct: 73 AMESQVLNAIGQRHSLVVATGGGMVSKPENWGILHQGIVIWLNPGREELFRRLHA-DSGN 131
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL + ++ AF L A ER YA AD V +
Sbjct: 132 RPLLQTEDPEA---AFDCLFA---ERLPLYAEADLRVEV 164
>sp|Q7V904|AROK_PROMM Shikimate kinase OS=Prochlorococcus marinus (strain MIT 9313)
GN=aroK PE=3 SV=1
Length = 192
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ L+LVGMM SGK++ G L++ L Y F D+D +E+L G + +IF E GEA FR
Sbjct: 14 LGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQL-AGQPIPKIFSEEGEAGFR 72
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
ES+ L + VVATGGG V +P NW + QGI ++LN + L RR+ A + +
Sbjct: 73 TMESQVLNAIGQRHSLVVATGGGIVSKPENWGVLHQGIVIWLNPGREELLRRLNA-DSGN 131
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
PLL + ++ AF L A ER Y AD V +
Sbjct: 132 RPLLQTEDPEA---AFDCLFA---ERLPLYCEADLHVEV 164
>sp|B7JZT6|AROK_CYAP8 Shikimate kinase OS=Cyanothece sp. (strain PCC 8801) GN=aroK PE=3
SV=1
Length = 187
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 103/184 (55%), Gaps = 10/184 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G ++L+GMMGSGK+T+G+IL+ LDY F D+D +E+ + S+ IF GE FR
Sbjct: 7 LQGINIYLIGMMGSGKSTIGKILAQRLDYRFFDTDILIER-VTQQSINDIFVTQGETVFR 65
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ E++ L +++ + V+ATGGG V+ NW ++ G+ ++L+V + L R+ + +
Sbjct: 66 DIETQVLSEVAACTRSVIATGGGIVLNSQNWSYLHHGLIIWLDVSIKLLKTRL--INDTT 123
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL-LNLAACIGLKDVLDITPTTI 270
PLL +D K L L ++R Y AD T+ + N + ++L+ PT I
Sbjct: 124 RPLL--KESDLTLK----LKTLDEQRRNLYNKADLTIVINQNRTPESIVSEILEAIPTVI 177
Query: 271 AMEV 274
+V
Sbjct: 178 KPKV 181
>sp|A9BCW6|AROK_PROM4 Shikimate kinase OS=Prochlorococcus marinus (strain MIT 9211)
GN=aroK PE=3 SV=1
Length = 197
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 87 EVASCLDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESG 146
+V L G+ L+LVGMMGSGK+ G +L+ L Y F D D +EK+ S+++IF + G
Sbjct: 9 QVCKKLGGRNLYLVGMMGSGKSRTGPVLAKKLSYGFVDVDDVIEKVTN-QSISEIFDQEG 67
Query: 147 EAYFREYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAA 206
E FRE E++ LQ++ VVATGGG V RP NW + QG+ +++++ + R+ +
Sbjct: 68 EIGFREIETQILQEIGQRHSLVVATGGGIVTRPENWGILHQGVVIWIDLDREIALSRLRS 127
Query: 207 VGTDSFPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
T PLL + D++ F KER Y +D +S+
Sbjct: 128 DETPR-PLLQKNLDDNFDCLF-------KERLPIYLESDVHLSV 163
>sp|Q4FQI2|AROK_PSYA2 Shikimate kinase OS=Psychrobacter arcticus (strain DSM 17307 /
273-4) GN=aroK PE=3 SV=1
Length = 186
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 78/121 (64%), Gaps = 4/121 (3%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+FLVG MG+GKTT+G +L+ L TF DSD YVE G +A IF + GEA FRE E+
Sbjct: 7 SVFLVGPMGAGKTTIGRLLAKQLGRTFVDSDWYVES-QTGADIAWIFDKEGEAGFRERET 65
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPL 214
+A+ +L+ PQ V+ATGGGAV+ N F++Q GI ++LN P+D R A S PL
Sbjct: 66 RAIDELTQQPQIVLATGGGAVMAAENREFLKQRGIVIYLNAPVDVQMARTAK--DKSRPL 123
Query: 215 L 215
L
Sbjct: 124 L 124
>sp|Q1Q8Q8|AROK_PSYCK Shikimate kinase OS=Psychrobacter cryohalolentis (strain K5)
GN=aroK PE=3 SV=1
Length = 186
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 78/121 (64%), Gaps = 4/121 (3%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+FLVG MG+GKTT+G +L+ L +F DSD Y+E G +A IF + GEA FRE E+
Sbjct: 7 SVFLVGPMGAGKTTIGRLLAKQLGRSFVDSDWYIES-QTGADIAWIFAKEGEAGFRERET 65
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPL 214
+A+ +L+ PQ V+ATGGGAV+ N +++Q GI ++LN P+D R A S PL
Sbjct: 66 RAIDELTQQPQIVLATGGGAVMAAENREYLKQRGIVIYLNAPVDVQMARTAK--DKSRPL 123
Query: 215 L 215
L
Sbjct: 124 L 124
>sp|Q74BL5|AROK_GEOSL Shikimate kinase OS=Geobacter sulfurreducens (strain ATCC 51573 /
DSM 12127 / PCA) GN=aroK PE=3 SV=1
Length = 175
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 90/154 (58%), Gaps = 10/154 (6%)
Query: 93 DGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFRE 152
DG+ + L G MG+GK+TVG++L+ L Y F+D D + + G S+ +IF+ GE FRE
Sbjct: 6 DGRNVVLTGFMGTGKSTVGKLLARRLGYRFSDLDALIVE-RAGISINEIFERYGEQRFRE 64
Query: 153 YESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDS 211
E++A++ L V +VVATGGGAV+ P N +R+ G+ V L L+ + R+ G
Sbjct: 65 LETEAIRSLGGVSGRVVATGGGAVIAPRNRVLLREAGLVVNLTASLEVILSRLK--GDRE 122
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANAD 245
PLL ++ AL+AL R AYA+AD
Sbjct: 123 RPLLKSNNTPE------ALAALMTARENAYADAD 150
>sp|Q8RAE8|AROK_THETN Shikimate kinase OS=Thermoanaerobacter tengcongensis (strain DSM
15242 / JCM 11007 / NBRC 100824 / MB4) GN=aroK PE=3 SV=1
Length = 171
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 96/182 (52%), Gaps = 22/182 (12%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L G MG+GKTTVG+ ++ L + F D+DK VEK M G SVA+IF++ GE YFR+ E
Sbjct: 2 KNIVLTGFMGTGKTTVGKKVATTLHFNFIDTDKLVEK-MAGMSVAEIFEKHGEEYFRKLE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
A+ K S + V+ATGGG V+ P N +R+ G+ + L + + R I+ T P
Sbjct: 61 KAAVIKASRLKNHVIATGGGVVLNPSNIVQLRKNGVIILLKARPEVILRNISK--TKDRP 118
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVSLLNLAACIGLKDVLDITPTTIAME 273
LL + + + L +ER Y AD T+ DV D T +A E
Sbjct: 119 LLAVEDPEK------RIRELLEEREPFYRFADYTI------------DVSDKTIEEVAEE 160
Query: 274 VL 275
V+
Sbjct: 161 VI 162
>sp|Q46HR4|AROK_PROMT Shikimate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=aroK
PE=3 SV=1
Length = 198
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 92 LDGQCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFR 151
L G+ +FL+GMMGSGK+ G +L+ ++Y F D+D +EK S++ IF++ GE FR
Sbjct: 14 LGGRNIFLIGMMGSGKSQTGPVLAKMINYAFVDTDDVIEK-ASKQSISSIFEKDGEKVFR 72
Query: 152 EYESKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQGITVFLNVPLDALARRIAAVGTDS 211
+ E K L+++S V+ATGGG V P NW + QGI ++L++ L +R+ +
Sbjct: 73 DVEKKVLKEISQHHSLVIATGGGLVTLPENWGILHQGIVIWLDLDLRRSIKRLESDHKRR 132
Query: 212 FPLLDYDSADSYTKAFTALSALSKERSEAYANADATVSL 250
LL + A+++++ + + R Y +D + +
Sbjct: 133 PLLLGDNLAENFSQIYES-------RKPIYLESDLRIEV 164
>sp|C3KXE0|AROK_CLOB6 Shikimate kinase OS=Clostridium botulinum (strain 657 / Type Ba4)
GN=aroK PE=3 SV=1
Length = 170
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM SGK+T+G +S L Y D+D +EK M G S+ +IFK GE YFRE E
Sbjct: 2 ENIVLIGMPLSGKSTLGREISKILKYDLIDTDTLIEK-MEGKSIKEIFKIYGEDYFREKE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
+ + KL +V++TGGG + N + + G TV+L VPL+ L +R+ G D+ P
Sbjct: 61 LEIINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKGEDTRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + L + K R E Y A +
Sbjct: 121 LLKNNDTK-------FLEEMYKNRIEIYEKAHTII 148
>sp|Q3AR93|AROK_CHLCH Shikimate kinase OS=Chlorobium chlorochromatii (strain CaD3)
GN=aroK PE=3 SV=1
Length = 190
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 90/155 (58%), Gaps = 6/155 (3%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+FL G GSGK+T+G +L+++L Y F D D +E+ G S+ QIF E+GEA FR++E +
Sbjct: 8 IFLTGFSGSGKSTIGPLLANSLGYEFVDLDALIERECG-KSINQIFAEAGEAAFRQHEEQ 66
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
L+ L + + VV+ GGG + +P + +RQ G V+L P+ LARR++ TD PLL
Sbjct: 67 TLETLLMRRKTVVSLGGGVLEQPRAFELVRQAGTVVYLKSPVKTLARRLSN-KTDR-PLL 124
Query: 216 DYDSAD--SYTKAFTALSALSKERSEAYANADATV 248
+ + S + ++ L R Y AD TV
Sbjct: 125 KGEQGEKLSQEEIEQKIAELLARREPRYECADITV 159
>sp|A7MLV5|AROL_CROS8 Shikimate kinase 2 OS=Cronobacter sakazakii (strain ATCC BAA-894)
GN=aroL PE=3 SV=1
Length = 174
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 79/120 (65%), Gaps = 8/120 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
Q ++L+G G GKTT GE L+ AL Y FAD+D+++ + T VA++ ++ G FR E
Sbjct: 3 QPIYLIGARGCGKTTTGEALARALAYGFADTDRWLREHTQMT-VAEVVEKEGWPGFRARE 61
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
S+ALQ ++ P VVATGGG V+R N FMR G+ ++LNVP++ LA+R+ ++FP
Sbjct: 62 SEALQAVT-APATVVATGGGMVLRDENREFMRAHGVVIYLNVPVEVLAQRL-----EAFP 115
>sp|C0QR76|AROK_PERMH Shikimate kinase OS=Persephonella marina (strain DSM 14350 / EX-H1)
GN=aroK PE=3 SV=1
Length = 164
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 87/154 (56%), Gaps = 12/154 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++LVG MGSGK+TVG++L++ L + F D D+ +EK G + IF+E GE+YFR+ E +
Sbjct: 4 IYLVGFMGSGKSTVGKLLAEKLGFRFVDIDQEIEK-EEGKKIKDIFREKGESYFRDLEKR 62
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFPLL 215
+++ VV+TGGG N R M++ G ++L+ PL+ + R G D PLL
Sbjct: 63 MIERFLGSKNLVVSTGGGLGADSENMRKMKENGTVIWLDTPLETVFERCK--GDDERPLL 120
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATVS 249
+ + + L ++R + YA AD +S
Sbjct: 121 KKNRKE--------IKELFEKRKKIYAQADIRIS 146
>sp|B1KT67|AROK_CLOBM Shikimate kinase OS=Clostridium botulinum (strain Loch Maree / Type
A3) GN=aroK PE=3 SV=1
Length = 170
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM SGK+T+G LS L Y D+D +E+ M S+ +IFK GE YFRE E
Sbjct: 2 ENIILIGMPLSGKSTLGRELSKILKYDLIDTDTLIEE-MEDKSIKEIFKIYGEDYFREKE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
K + KL +V++TGGG + N + + G TV+L VPL+ L +R+ D+ P
Sbjct: 61 LKIINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEDDARP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL D L + K R E Y A +
Sbjct: 121 LLKNDDT-------KFLEEMYKNRIEIYEKAHTII 148
>sp|A5WCG4|AROK_PSYWF Shikimate kinase OS=Psychrobacter sp. (strain PRwf-1) GN=aroK PE=3
SV=1
Length = 180
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 77/122 (63%), Gaps = 4/122 (3%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
LF+VG MG+GKTTVG++L+ L F DSD Y+ + G + IF++ GE FRE E+
Sbjct: 7 SLFIVGPMGAGKTTVGKLLAKHLGRDFIDSDHYICE-QTGADIPWIFEKEGETGFREREA 65
Query: 156 KALQKLSLVPQQVVATGGGAVVRPLNW-RFMRQGITVFLNVPLDALARRIAAVGTDSFPL 214
+A+ +L+ +P V+ATGGG V++P N +QGIT++L +D +R A S PL
Sbjct: 66 RAIAELTALPNVVLATGGGVVMQPQNRDNLTKQGITIYLRANVDVQLKRTAK--DKSRPL 123
Query: 215 LD 216
L+
Sbjct: 124 LN 125
>sp|Q31DP8|AROK_THICR Shikimate kinase OS=Thiomicrospira crunogena (strain XCL-2) GN=aroK
PE=3 SV=1
Length = 174
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 92/172 (53%), Gaps = 11/172 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ +FLVG MG+GK+TVG L+D L Y F DSD+ +E G T + IF GE+ FR E
Sbjct: 4 ESIFLVGPMGAGKSTVGRFLADKLHYQFLDSDQVIEDKTGAT-IPMIFDIEGESGFRARE 62
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
A+ L+ + V+ATGGGA++ P N + +R +G V+L +D+L +R + P
Sbjct: 63 KAAIDDLTQQSEIVLATGGGAILNPENRKNLRSRGFVVYLKSSVDSLVQRTRH--DRNRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYAN-ADATVSLLNLAACIGLKDVLD 264
LL ++ + L L +ER Y AD + ++ +K +LD
Sbjct: 121 LLQTENPEQ------VLRKLIEERGPLYEEVADLVIQTEQVSVHRVVKQILD 166
>sp|C1FPC6|AROK_CLOBJ Shikimate kinase OS=Clostridium botulinum (strain Kyoto / Type A2)
GN=aroK PE=3 SV=1
Length = 170
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM SGK+T+G LS L Y D+D +E+ M S+ +IFK GE YFRE E
Sbjct: 2 ENIVLIGMPLSGKSTLGRELSKILKYDLIDTDTLIEE-MEDKSIKEIFKIYGEDYFREKE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
K + KL +V++TGGG + N + + G TV+L VPL+ L +R+ D+ P
Sbjct: 61 LKIINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + L + K R E Y A +
Sbjct: 121 LLKNNDTK-------FLEEMYKNRIEIYEKAHTII 148
>sp|A5I323|AROK_CLOBH Shikimate kinase OS=Clostridium botulinum (strain Hall / ATCC 3502
/ NCTC 13319 / Type A) GN=aroK PE=3 SV=1
Length = 170
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM SGK+T+G LS L Y D+D +E+ M S+ +IFK GE YFRE E
Sbjct: 2 ENIVLIGMPLSGKSTLGRELSKILKYDLIDTDTLIEE-MEDKSIKEIFKIYGEDYFREKE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
K + KL +V++TGGG + N + + G TV+L VPL+ L +R+ D+ P
Sbjct: 61 LKIINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + L + K R E Y A +
Sbjct: 121 LLKNNDT-------KFLEEMYKNRIEIYEKAHTII 148
>sp|A7FUV4|AROK_CLOB1 Shikimate kinase OS=Clostridium botulinum (strain ATCC 19397 / Type
A) GN=aroK PE=3 SV=1
Length = 170
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM SGK+T+G LS L Y D+D +E+ M S+ +IFK GE YFRE E
Sbjct: 2 ENIVLIGMPLSGKSTLGRELSKILKYDLIDTDTLIEE-MEDKSIKEIFKIYGEDYFREKE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
K + KL +V++TGGG + N + + G TV+L VPL+ L +R+ D+ P
Sbjct: 61 LKIINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + L + K R E Y A +
Sbjct: 121 LLKNNDT-------KFLEEMYKNRIEIYEKAHTII 148
>sp|Q2RI74|AROK_MOOTA Shikimate kinase OS=Moorella thermoacetica (strain ATCC 39073)
GN=aroK PE=3 SV=1
Length = 173
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 13/151 (8%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ L+G MGSGKTTVG +L+ L ++F D+D VE+ +G V +IF GE +FRE E +
Sbjct: 5 IVLIGFMGSGKTTVGRLLARDLGWSFLDTDTMVEERLG-LPVKEIFAREGEEFFREVEKE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQG-ITVFLNV-PLDALARRIAAVGTDSFPL 214
A+ +++ Q V+ATGGGAV+ +N + +R+G V+L V P AL R A DS PL
Sbjct: 64 AVARVATARQAVIATGGGAVLCGVNVKLLREGNKVVWLQVRPETALKR---AGLDDSRPL 120
Query: 215 LDYDSADSYTKAFTALSALSKERSEAYANAD 245
L ++AL + R YA AD
Sbjct: 121 LQGREPRD-------IAALLRRREPYYAFAD 144
>sp|Q3J2I9|AROK_RHOS4 Shikimate kinase OS=Rhodobacter sphaeroides (strain ATCC 17023 /
2.4.1 / NCIB 8253 / DSM 158) GN=aroK PE=3 SV=1
Length = 181
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + +VGMMG+GKT VG L+ L+ F DSD+ +E+ T +A+IF GE +FRE E
Sbjct: 7 KTVVMVGMMGAGKTAVGSALARGLNVPFLDSDEEIERAANRT-IAEIFARDGEPFFREKE 65
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFP 213
S+ L +L V++TGGGA + N R +R QG++V+L LD L R+ T P
Sbjct: 66 SQVLARLLRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWLKADLDVLWHRVRHKATR--P 123
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL + L AL + R YA AD V
Sbjct: 124 LLRTPNPRE------TLRALLEARDPVYAQADLAVE 153
>sp|B9MKD6|AROK_CALBD Shikimate kinase OS=Caldicellulosiruptor bescii (strain ATCC
BAA-1888 / DSM 6725 / Z-1320) GN=aroK PE=3 SV=1
Length = 172
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 88/156 (56%), Gaps = 10/156 (6%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L G MGSGKTT+G+++++ LD D+D V K G T + +IF+ GE FRE E
Sbjct: 2 KNIVLTGFMGSGKTTIGKLIAEKLDIELIDTDSEVIKEFGMT-IDKIFEVHGEKKFREVE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLNVPLDALARRIAAVGTDSFP 213
+K ++++S + V++TGGG V+ P N + +R+ G+ FL P +++ +R+ D+ P
Sbjct: 61 TKVIERVSKLENVVISTGGGVVLNPENVKLLRENGVIYFLYAPAESILKRLK--DDDTRP 118
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATVS 249
LL + D + L+ R Y N D ++
Sbjct: 119 LL--KNGDKLSNIIRLLNM----RMPFYKNCDFEIN 148
>sp|O67925|AROK_AQUAE Shikimate kinase OS=Aquifex aeolicus (strain VF5) GN=aroK PE=1 SV=1
Length = 168
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 84/153 (54%), Gaps = 12/153 (7%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
++L+G M SGK+TVG +LS +L+ F D D+ V+K G S+ QIF++ GEAYFR+ E +
Sbjct: 3 IYLIGFMCSGKSTVGSLLSRSLNIPFYDVDEEVQK-REGLSIPQIFEKKGEAYFRKLEFE 61
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMR-QGITVFLNVPLDALARRIAAVGTDSFPLL 215
L+ LS V++TGGG FM+ +G TVF+++P + R + PLL
Sbjct: 62 VLKDLSEKENVVISTGGGLGANEEALNFMKSRGTTVFIDIPFEVFLERCKD--SKERPLL 119
Query: 216 DYDSADSYTKAFTALSALSKERSEAYANADATV 248
+ + L +ER + Y+ AD V
Sbjct: 120 --------KRPLDEIKNLFEERRKIYSKADIKV 144
>sp|A8MFK5|AROK_ALKOO Shikimate kinase OS=Alkaliphilus oremlandii (strain OhILAs) GN=aroK
PE=3 SV=1
Length = 169
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 97 LFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYESK 156
+ LVG M GKTT+G++L+D LDY F D D ++EK S+++IF+ GEAYFR+ ES+
Sbjct: 5 IVLVGFMAVGKTTLGKLLADQLDYNFIDLDLFIEK-KESMSISEIFRLKGEAYFRQKESE 63
Query: 157 ALQKLSLVPQQVVATGGGAVVRPLNWRFMRQ-GITVFLN 194
AL LS V Q V+ATGGG V+ N ++Q G ++L
Sbjct: 64 ALDLLSDVEQSVIATGGGTVISEENRSKLKQIGRVIYLE 102
>sp|B1IMQ2|AROK_CLOBK Shikimate kinase OS=Clostridium botulinum (strain Okra / Type B1)
GN=aroK PE=3 SV=1
Length = 170
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 9/155 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM SGK+T+G LS L Y D+D +E+ M S+ +IFK GE YFRE E
Sbjct: 2 ENIVLIGMPLSGKSTLGRELSKILKYDLIDTDTLIEE-MEDKSIKEIFKIYGEDYFREKE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
+ + KL +V++TGGG + N + G TV+L VPL+ L +R+ D+ P
Sbjct: 61 LEIINKLKKESNKVISTGGGLPIYNKNIYELKNIGFTVYLKVPLEELIKRMVKKEYDTRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + L + K R E Y A +
Sbjct: 121 LLKNNDT-------KFLEEMYKNRIEIYEKAHTII 148
>sp|A7GEL1|AROK_CLOBL Shikimate kinase OS=Clostridium botulinum (strain Langeland / NCTC
10281 / Type F) GN=aroK PE=3 SV=1
Length = 170
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 9/155 (5%)
Query: 95 QCLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYE 154
+ + L+GM SGK+T+G LS L Y D+D +E+ M S+ +IFK GE YFRE E
Sbjct: 2 ENIVLIGMPLSGKSTLGRELSKILKYDLIDTDTLIEE-MEDKSIKEIFKIYGEDYFREKE 60
Query: 155 SKALQKLSLVPQQVVATGGGAVVRPLN-WRFMRQGITVFLNVPLDALARRIAAVGTDSFP 213
+ + K +V++TGGG + N + + G TV+L VPL+ L +R+ D+ P
Sbjct: 61 LEIINKFKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRP 120
Query: 214 LLDYDSADSYTKAFTALSALSKERSEAYANADATV 248
LL + L + K R E Y A +
Sbjct: 121 LLKNNDT-------KFLEEMYKNRIEIYEKAHTII 148
>sp|A1TKW2|AROK_ACIAC Shikimate kinase OS=Acidovorax citrulli (strain AAC00-1) GN=aroK
PE=3 SV=1
Length = 183
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 96 CLFLVGMMGSGKTTVGEILSDALDYTFADSDKYVEKLMGGTSVAQIFKESGEAYFREYES 155
+ L+G+ GSGK+TVG L+ L F DSD +E+ +GG S+ F GEA FR+ E
Sbjct: 7 SIHLIGLPGSGKSTVGRHLARRLGLPFIDSDHVIEQRIGG-SIRGFFDREGEAAFRDLEE 65
Query: 156 KALQKLSL--VPQQVVATGGGAVVRPLNW-RFMRQGITVFLNVPLDALARRIAAVGTDSF 212
+ + +L+ VP QV+ATGGG V+RP N R +G V+LN + + R I +
Sbjct: 66 EVILELTEANVPPQVLATGGGVVIRPGNRTRLRERGTVVYLNASPEEIFRHIRH--DQTR 123
Query: 213 PLLDYDSADSYTKAFTALSALSKERSEAYANA 244
PLL S L L +ER Y A
Sbjct: 124 PLLQVGS------PLDRLRELQRERDPLYREA 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,697,357
Number of Sequences: 539616
Number of extensions: 4186694
Number of successful extensions: 17524
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 16464
Number of HSP's gapped (non-prelim): 576
length of query: 287
length of database: 191,569,459
effective HSP length: 116
effective length of query: 171
effective length of database: 128,974,003
effective search space: 22054554513
effective search space used: 22054554513
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)