BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023125
MSLGLSWAHVLGDPFSASAFVSMWAQIMAGRVPPKSLHEPEPEPEPEKSETETQTRASES
VAGNLYPIKRVDPVGDHWQFPNNCNIKTHTFQFTKKQLDQMASNLRYRGIREAAAVSHFE
VISATIWKLLAKASEDSGPGVVTICRYNGQRENETASNDMVLSTAEVDFDVSKSDVWELS
TLIADKRKDVDEKVLSESSDFIMYGANLTFVDMEEADVYGLKLQGQKPVDVNYSINGVGE
QGVVLVLAGPEEDSGRGRDRGSTVTVVLPENQLEKLMNELNQEWNLA

High Scoring Gene Products

Symbol, full name Information P value
CER2
ECERIFERUM 2
protein from Arabidopsis thaliana 2.5e-33
CER26
ECERIFERUM 26
protein from Arabidopsis thaliana 1.2e-28
CER26-LIKE
AT3G23840
protein from Arabidopsis thaliana 6.4e-28

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023125
        (287 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2005499 - symbol:CER2 "ECERIFERUM 2" species:3...   363  2.5e-33   1
TAIR|locus:2119480 - symbol:CER26 "ECERIFERUM 26" species...   319  1.2e-28   1
TAIR|locus:2076136 - symbol:CER26-LIKE "AT3G23840" specie...   312  6.4e-28   1


>TAIR|locus:2005499 [details] [associations]
            symbol:CER2 "ECERIFERUM 2" species:3702 "Arabidopsis
            thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016740
            "transferase activity" evidence=ISS] [GO:0016747 "transferase
            activity, transferring acyl groups other than amino-acyl groups"
            evidence=IEA] [GO:0000038 "very long-chain fatty acid metabolic
            process" evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
            evidence=RCA] [GO:0042335 "cuticle development" evidence=RCA]
            [GO:0042546 "cell wall biogenesis" evidence=RCA] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] [GO:0042761 "very long-chain
            fatty acid biosynthetic process" evidence=IDA] [GO:0010025 "wax
            biosynthetic process" evidence=IMP] InterPro:IPR003480 Pfam:PF02458
            GO:GO:0005783 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0016747 Gene3D:3.30.559.10 InterPro:IPR023213 GO:GO:0010025
            EMBL:AL035356 EMBL:AL161561 GO:GO:0042761 EMBL:U40849 EMBL:AY087262
            EMBL:BT026481 EMBL:X93080 IPI:IPI00540850 PIR:T05583
            RefSeq:NP_194182.1 UniGene:At.24827 ProteinModelPortal:Q39048
            STRING:Q39048 PRIDE:Q39048 ProMEX:Q39048 EnsemblPlants:AT4G24510.1
            GeneID:828553 KEGG:ath:AT4G24510 TAIR:At4g24510
            HOGENOM:HOG000083809 InParanoid:Q39048 OMA:NCKMETH PhylomeDB:Q39048
            ProtClustDB:CLSN2685425 ArrayExpress:Q39048 Genevestigator:Q39048
            Uniprot:Q39048
        Length = 421

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 93/287 (32%), Positives = 154/287 (53%)

Query:     1 MSLGLSWAHVLGDPFSASAFVSMWAQIMAGRVXXXXXXXXXXXXXXXXXXXXXQTRASES 60
             + +GLSWAH+LGD FSAS F+    Q+++G                        + A   
Sbjct:   158 LCIGLSWAHILGDVFSASTFMKTLGQLVSGHAPTKPVYPKTPELT---------SHARND 208

Query:    61 VAGNLYPIKRVDPVGDHWQFPNNCNIKTHTFQFTKKQLDQMASNLRYRGIREAAAVSHFE 120
               G    I+++D VG++W   N C +  H F F+   +D + +    R        S  +
Sbjct:   209 --GEAISIEKIDSVGEYWLLTNKCKMGRHIFNFSLNHIDSLMAKYTTRD----QPFSEVD 262

Query:   121 VISATIWKLLAKASEDSGPGVVTICRYNGQRENETASN-DMVLSTAEVDFDVSKSDVWEL 179
             ++ A IWK L     ++   V+TIC    ++++ T  N D+V+S  E + ++    + EL
Sbjct:   263 ILYALIWKSLLNIRGETNTNVITIC---DRKKSSTCWNEDLVISVVEKNDEMV--GISEL 317

Query:   180 STLIADKRKDVD---EKVLSE---SSDFIMYGANLTFVDMEEADVYGLKLQGQKPVDVNY 233
             + LIA ++++ +   ++++ +   SSDF  YGANLTFV+++E D+Y L++ G KP  VNY
Sbjct:   318 AALIAGEKREENGAIKRMIEQDKGSSDFFTYGANLTFVNLDEIDMYELEINGGKPDFVNY 377

Query:   234 SINGVGEQGVVLVLAGPEEDSGRGRDRGSTVTVVLPENQLEKLMNEL 280
             +I+GVG++GVVLV   P+++  R       V+VV+PE  L KL  E+
Sbjct:   378 TIHGVGDKGVVLVF--PKQNFAR------IVSVVMPEEDLAKLKEEV 416


>TAIR|locus:2119480 [details] [associations]
            symbol:CER26 "ECERIFERUM 26" species:3702 "Arabidopsis
            thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0016740
            "transferase activity" evidence=ISS] [GO:0016747 "transferase
            activity, transferring acyl groups other than amino-acyl groups"
            evidence=IEA] [GO:0019761 "glucosinolate biosynthetic process"
            evidence=RCA] InterPro:IPR003480 Pfam:PF02458 EMBL:CP002687
            GO:GO:0016747 Gene3D:3.30.559.10 InterPro:IPR023213 EMBL:AL035528
            EMBL:AL161537 HOGENOM:HOG000083809 ProtClustDB:CLSN2685425
            EMBL:AF446369 EMBL:BT000594 EMBL:AK226224 IPI:IPI00530275
            PIR:T05253 RefSeq:NP_193120.1 UniGene:At.2726 UniGene:At.74990
            ProteinModelPortal:Q9SVM9 PRIDE:Q9SVM9 EnsemblPlants:AT4G13840.1
            GeneID:827018 KEGG:ath:AT4G13840 TAIR:At4g13840 InParanoid:Q9SVM9
            OMA:VGDLWVT PhylomeDB:Q9SVM9 ArrayExpress:Q9SVM9
            Genevestigator:Q9SVM9 Uniprot:Q9SVM9
        Length = 428

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 85/290 (29%), Positives = 147/290 (50%)

Query:     1 MSLGLSWAHVLGDPFSASAFVSMWAQIMAGRVXXXXXXXXXXXXXXXXXXXXXQTRASES 60
             + LGLSWA+++GD FS     ++WA+ + G                       + ++   
Sbjct:   156 LGLGLSWANIIGDAFSLFYAFNLWAKAITGE---------KIYAPTTPSIGERRFQSPNP 206

Query:    61 VAGNLYPIKRVDPVGDHWQFPNNCNIKTHTFQFTKKQLDQMASNLRYRGIREAAAVSHFE 120
                +   IKRV+PVGD W  PN+  +  + F  +    DQ++ +   +G     ++  FE
Sbjct:   207 TVKDPVSIKRVEPVGDLWVTPNDKKLANYCFNLSVA--DQISPHFPAKG---DDSIPVFE 261

Query:   121 VISATIWKLLAKASEDSGPGVVTICRYN-GQRENETASNDMVLSTAEVDFDVSKSDVWEL 179
             +++  IWK +AK   +  P  VTI + +    +     N  V+S+  VDF V+++ V EL
Sbjct:   262 ILAGIIWKCIAKVRVEPKPVTVTIIKKDPNDLKLNAIRNSQVISSVSVDFPVAEATVEEL 321

Query:   180 STLIA---DKRKDVDEKVLSESSD----FIMYGANLTFVDMEEADVYGLKLQGQKPVDVN 232
                +    D+R  ++E  + ES D    F++YGA LTF+D+   D+Y  K+ G+ P  V 
Sbjct:   322 VKAMGEAKDERCGIEE--IGESCDGNLDFVVYGAKLTFLDLTGEDLYEAKVMGKSPESVY 379

Query:   233 YSINGVGEQGVVLVLAGPEEDSGRGRDRGSTVTVVLPENQLEKLMNELNQ 282
              ++ G+GE+G+V+V A     + +  +R   VTV LPE ++E++  E  +
Sbjct:   380 CNVEGIGEEGLVVVYA-----AAKSEER--VVTVTLPEEEMERVKLEFKK 422


>TAIR|locus:2076136 [details] [associations]
            symbol:CER26-LIKE "AT3G23840" species:3702 "Arabidopsis
            thaliana" [GO:0016740 "transferase activity" evidence=ISS]
            [GO:0016747 "transferase activity, transferring acyl groups other
            than amino-acyl groups" evidence=IEA] [GO:0009535 "chloroplast
            thylakoid membrane" evidence=IDA] InterPro:IPR003480 Pfam:PF02458
            EMBL:CP002686 GO:GO:0016747 Gene3D:3.30.559.10 InterPro:IPR023213
            GO:GO:0009535 EMBL:AP001297 ProtClustDB:CLSN2685425 EMBL:BT026480
            IPI:IPI00545306 RefSeq:NP_566741.1 UniGene:At.37641
            UniGene:At.68116 ProteinModelPortal:Q9LIS1 PRIDE:Q9LIS1
            EnsemblPlants:AT3G23840.1 GeneID:821967 KEGG:ath:AT3G23840
            TAIR:At3g23840 InParanoid:Q9LIS1 OMA:LVYHQPV PhylomeDB:Q9LIS1
            Genevestigator:Q9LIS1 Uniprot:Q9LIS1
        Length = 420

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 76/219 (34%), Positives = 124/219 (56%)

Query:    68 IKRVDPVGDHWQFPNNCNIKTHTFQFTKKQLDQMASNLRYRGIREAAAVSHFEVISATIW 127
             +K+VD VGD W  PNN  + T +F  T   ++ + ++    G  E      FE+++  IW
Sbjct:   211 VKQVDLVGDLWVAPNNSKMTTFSFNLT---VNDLKTHFPVNGDGE------FEILTGIIW 261

Query:   128 KLLAKASEDSGPGVVTICRYNGQRENETA-SNDMVLSTAEVDFDVSKSDVWELSTLIA-- 184
             K +A    +S P  +T+ R + ++    A  N  ++S+  VDF V+++ + E+   I   
Sbjct:   262 KCVATVRGESAPVTITVIRSDPKKLKPRAVRNGQMISSIHVDFSVAEASLEEIVKSIGEA 321

Query:   185 -DKRKDVDEKVLSESSDFIMYGANLTFVDMEEADVYGLKLQGQKPVDVNYSINGVGEQGV 243
              D+R  +DE ++ + SDFI+YGANLTFVDM E D Y  K+ G+ P  V  ++ G+G+ G 
Sbjct:   322 KDERVVIDE-IVDDVSDFIVYGANLTFVDMSEVDFYEAKVMGKSPESVYCNVQGIGDDGA 380

Query:   244 VLVLAGPEEDSGRGRDRGSTVTVVLPENQLEKLMNELNQ 282
             V+VL G  E+     +R   VTV LP +++EK+  E+ +
Sbjct:   381 VVVLPGVVEE-----ER--VVTVTLPVDEIEKVKWEMKK 412

 Score = 140 (54.3 bits), Expect = 5.6e-07, P = 5.6e-07
 Identities = 35/98 (35%), Positives = 46/98 (46%)

Query:     1 MSLGLSWAHVLGDPFSASAFVSMWAQIMAGRVXXXXXXXXXXXXXXXXXXXXXQTRASES 60
             ++LGLSWAH++GDPFS S F ++WAQ  AG                         +  +S
Sbjct:   154 LALGLSWAHIMGDPFSLSHFFNLWAQAFAGGKIYCPKTSVTERDFQNPTSTF---KKPDS 210

Query:    61 VAGNLYPIKRVDPVGDHWQFPNNCNIKTHTFQFTKKQL 98
             V       K+VD VGD W  PNN  + T +F  T   L
Sbjct:   211 V-------KQVDLVGDLWVAPNNSKMTTFSFNLTVNDL 241


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.131   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      287       266   0.00094  114 3  11 23  0.38    34
                                                     32  0.39    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  208 KB (2115 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.96u 0.09s 21.05t   Elapsed:  00:00:01
  Total cpu time:  20.96u 0.09s 21.05t   Elapsed:  00:00:01
  Start:  Sat May 11 11:56:42 2013   End:  Sat May 11 11:56:43 2013

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