Query 023125
Match_columns 287
No_of_seqs 110 out of 1152
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 16:47:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023125.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023125hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 3.8E-51 1.3E-55 382.5 25.1 263 1-282 150-438 (439)
2 2e1v_A Acyl transferase; BAHD 100.0 4.4E-46 1.5E-50 349.6 24.9 260 1-283 162-449 (454)
3 2xr7_A Malonyltransferase; xen 100.0 7.3E-46 2.5E-50 348.0 25.4 260 1-282 157-448 (453)
4 2rkv_A Trichothecene 3-O-acety 100.0 6.4E-46 2.2E-50 348.1 22.6 262 1-286 148-445 (451)
5 2bgh_A Vinorine synthase; VS, 100.0 3.2E-45 1.1E-49 340.7 22.1 243 1-281 152-412 (421)
6 1q9j_A PAPA5, polyketide synth 97.7 0.0031 1.1E-07 57.0 18.9 180 2-189 117-313 (422)
7 1l5a_A Amide synthase, VIBH; n 97.3 0.018 6.1E-07 52.3 18.1 171 2-189 119-304 (436)
8 2jgp_A Tyrocidine synthetase 3 97.2 0.015 5.1E-07 54.3 16.7 177 2-189 215-400 (520)
9 4hvm_A Tlmii; PSI-biology, mid 96.8 0.0041 1.4E-07 57.7 8.9 170 2-189 135-327 (493)
10 3fot_A 15-O-acetyltransferase; 96.4 0.14 4.8E-06 48.1 16.6 79 86-167 277-365 (519)
11 2xhg_A Tyrocidine synthetase A 96.2 0.69 2.3E-05 42.0 21.0 99 85-190 232-336 (466)
12 2vsq_A Surfactin synthetase su 95.2 0.64 2.2E-05 48.5 17.3 173 2-189 140-327 (1304)
13 1x93_A Hypothetical protein HP 72.5 4.9 0.00017 24.4 3.6 38 87-134 2-39 (55)
14 2k1o_A Putative; repressor, tr 62.3 12 0.0004 23.6 3.9 40 86-135 15-54 (66)
15 2xl1_A Arginine attenuator pep 60.9 6.1 0.00021 19.9 2.0 18 114-131 6-23 (26)
16 2xt6_A 2-oxoglutarate decarbox 50.5 9.7 0.00033 39.0 3.4 29 2-30 193-221 (1113)
17 1use_A VAsp, vasodilator-stimu 28.5 33 0.0011 20.4 1.9 19 268-286 4-22 (45)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=3.8e-51 Score=382.45 Aligned_cols=263 Identities=16% Similarity=0.245 Sum_probs=207.3
Q ss_pred CeeeeeeeccccCHHHHHHHHHHHHHHHcCCC-CCCCCCCCCCCC--CCCccccccccccCccccCCCCCccccCCCCCC
Q 023125 1 MSLGLSWAHVLGDPFSASAFVSMWAQIMAGRV-PPKSLHEPEPEP--EPEKSETETQTRASESVAGNLYPIKRVDPVGDH 77 (287)
Q Consensus 1 ~~lg~~~~H~v~Dg~~~~~fl~aWa~~~rg~~-p~~~~~~~~~l~--~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (287)
++||+++||.++||.|+.+|+++||++|||.. ...|.+|+..+. +||...+ .| .++.++..... .....
T Consensus 150 ~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~rg~~~~~~P~~dr~~l~~~~pp~~~~-----~~-~~~~~~~~~~~--~~~~~ 221 (439)
T 4g22_A 150 VSLGVGMRHHAADGFSGLHFINSWSDMARGLDVTLPPFIDRTLLRARDPPQPQF-----QH-IEYQPPPALAV--SPQTA 221 (439)
T ss_dssp EEEEEEECTTTCCHHHHHHHHHHHHHHHTTCCCSSCCBCCGGGGCCCSSCCCSS-----CC-GGGSCCC-----------
T ss_pred EEEEEEeeeccCcHHHHHHHHHHHHHHhCCCCCCCCCccccccccCCCCCCCCc-----Cc-ccccCCCCCcc--ccccc
Confidence 58999999999999999999999999999986 345677876552 3444422 22 23332111110 00000
Q ss_pred CCCCCCCceeEEEEEeCHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhcc--CCCcEEEEEecCCCC----
Q 023125 78 WQFPNNCNIKTHTFQFTKKQLDQMASNLRYRGIREAAAVSHFEVISATIWKLLAKASED--SGPGVVTICRYNGQR---- 151 (287)
Q Consensus 78 ~~~~~~~~~~~~~f~~s~~~l~~Lk~~~~~~~~~~~~~~S~~dal~A~~W~~~~~ar~~--~~~~~l~~~vd~R~r---- 151 (287)
+..+ ..++.+++|+|++++|++||+.+.++.. ..++|+||+|+||+|+|++|||+. ++.+.+.++||+|+|
T Consensus 222 ~~~~-~~~~~~~~f~fs~~~i~~LK~~a~~~~~--~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~rl~Pp 298 (439)
T 4g22_A 222 ASDS-VPETAVSIFKLTREQISALKAKSKEDGN--TISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPS 298 (439)
T ss_dssp -------CEEEEEEEECHHHHHHHHHGGGGGGC--CCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTTSSSC
T ss_pred ccCC-cccceEEEEEECHHHHHHHHHHhhccCC--CCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCCCCCC
Confidence 0100 1468999999999999999999976542 257999999999999999999986 457899999999999
Q ss_pred -CCCCCCcceEEeeeeec-ccccCCCHHHHHHHHHHHHhhhhHhhhhcccccee--------------e-CCcEEEEeCC
Q 023125 152 -ENETASNDMVLSTAEVD-FDVSKSDVWELSTLIADKRKDVDEKVLSESSDFIM--------------Y-GANLTFVDME 214 (287)
Q Consensus 152 -~~~y~GN~~~~~~~~~~-~~l~~~~l~~~A~~ir~a~~~~~~~~~~~~~d~~~--------------~-g~~~~~tsw~ 214 (287)
|++|+||++..+.+.++ +|+.+.+|+.+|.+||+++++++++|+++.+||+. + +.++.+|||+
T Consensus 299 lp~~Y~GN~v~~~~~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~ 378 (439)
T 4g22_A 299 LPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWV 378 (439)
T ss_dssp CCTTBCSCCEEEECCEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECT
T ss_pred CCCCcccceeehhhcceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecC
Confidence 56799999999998887 78989999999999999999999999987666532 1 2479999999
Q ss_pred CCcccceecCCCCceeEEEeecccCcccEEEEEcCCCCCCCCCCCCceEEEEEcCHHHHHHHHHHHhh
Q 023125 215 EADVYGLKLQGQKPVDVNYSINGVGEQGVVLVLAGPEEDSGRGRDRGSTVTVVLPENQLEKLMNELNQ 282 (287)
Q Consensus 215 ~~~~y~~DFG~G~P~~v~~~~~~~~~~g~~~ilp~~~~~g~~~~~~g~ev~v~L~~~~m~~l~~~~~~ 282 (287)
|+++|++|||||||+++++. ....+|.++++|+++++| |++|.|+|++++|++|++++++
T Consensus 379 r~~~y~~DFGwGkP~~~~~~--~~~~~g~~~~~p~~~~~g------gi~v~v~L~~~~m~~f~~~~~~ 438 (439)
T 4g22_A 379 RLPIHDADFGWGRPIFMGPG--GIAYEGLSFILPSPTNDG------SMSVAISLQGEHMKLFQSFLYD 438 (439)
T ss_dssp TSCTTCCCCSSCCCSEEEES--SCCSTTEEEEEECTTCSS------CEEEEEEEEHHHHHHHHHHHTC
T ss_pred cCCccccccCCCCcceeecc--ccCCCcEEEEeecCCCCC------cEEEEEECCHHHHHHHHHHhcc
Confidence 99999999999999998874 333569999999876544 7999999999999999998875
No 2
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=4.4e-46 Score=349.60 Aligned_cols=260 Identities=16% Similarity=0.191 Sum_probs=198.0
Q ss_pred CeeeeeeeccccCHHHHHHHHHHHHHHHc-CCC-----C--CCCCCCCCCCCCCCccccccccccCccccCCCCCcc-cc
Q 023125 1 MSLGLSWAHVLGDPFSASAFVSMWAQIMA-GRV-----P--PKSLHEPEPEPEPEKSETETQTRASESVAGNLYPIK-RV 71 (287)
Q Consensus 1 ~~lg~~~~H~v~Dg~~~~~fl~aWa~~~r-g~~-----p--~~~~~~~~~l~~pp~~~~~~~~~~~~~~~~~~~~~~-~~ 71 (287)
++||+++||.++||.|+.+|+++||++|| |.. + ..|.+|+ .+++|+ . ++. +. ..+.. .... ..
T Consensus 162 ~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~~p~-~--~~~-~~--~~~~~-~~~~~~~ 233 (454)
T 2e1v_A 162 IAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-IIKYPM-L--DEA-YL--KRAKV-ESFNEDY 233 (454)
T ss_dssp EEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCCCHH-H--HHH-HH--HHTTC-TTHHHHC
T ss_pred EEEEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc-cCCCCC-c--chH-HH--Hhhhc-ccccccc
Confidence 58999999999999999999999999999 863 1 2467788 655443 2 111 00 00000 0000 00
Q ss_pred -CCCCCCCCCCCCCceeEEEEEeCHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCcEEEEEecCCC
Q 023125 72 -DPVGDHWQFPNNCNIKTHTFQFTKKQLDQMASNLRYRGIREAAAVSHFEVISATIWKLLAKASEDSGPGVVTICRYNGQ 150 (287)
Q Consensus 72 -~~~~~~~~~~~~~~~~~~~f~~s~~~l~~Lk~~~~~~~~~~~~~~S~~dal~A~~W~~~~~ar~~~~~~~l~~~vd~R~ 150 (287)
.+ .. +...+..+++|+|++++|++||+.+.+.... ..++|+||+|+||+|+|++||| .++.+.+.++||+|+
T Consensus 234 ~~~--~~---~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~-~~~~St~d~l~A~lWr~~~~Ar-~~~~~~l~~~vd~R~ 306 (454)
T 2e1v_A 234 VTQ--SL---AGPSDKLRATFILTRAVINQLKDRVLAQLPT-LEYVSSFTVACAYIWSCIAKSR-NDKLQLFGFPIDRRA 306 (454)
T ss_dssp CCC--CC---CCCCCEEEEEEEECHHHHHHHHHHHHHHCTT-CSCCCHHHHHHHHHHHHHHHHH-CCSEEEEEEEEECGG
T ss_pred Ccc--cC---CCCCCceEEEEEECHHHHHHHHHHHhhcCCC-CCcccHHHHHHHHHHHHHhhhc-CCCceEEEEEecchh
Confidence 00 00 0124577999999999999999999765421 2579999999999999999999 556889999999999
Q ss_pred C-----CCCCCCcceEEeeeeec-ccccC-CCHHHHHHHHHHHHhhhh----Hhhhhc-ccccee-----eC-CcEEEEe
Q 023125 151 R-----ENETASNDMVLSTAEVD-FDVSK-SDVWELSTLIADKRKDVD----EKVLSE-SSDFIM-----YG-ANLTFVD 212 (287)
Q Consensus 151 r-----~~~y~GN~~~~~~~~~~-~~l~~-~~l~~~A~~ir~a~~~~~----~~~~~~-~~d~~~-----~g-~~~~~ts 212 (287)
| |++|+||++..+.+.++ +|+.. .+|..+|.+||+++++++ ++++++ ..||.. .+ ..+.+||
T Consensus 307 rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vss 386 (454)
T 2e1v_A 307 RMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDLVSEGMPTTMTWVSG 386 (454)
T ss_dssp GSSSCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CHHHHHCCCSEEEEEEC
T ss_pred ccCCCCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhcCCceEEEec
Confidence 9 46799999999988877 78884 899999999999999986 445566 566653 22 3799999
Q ss_pred CCCCcccceecCCCCceeEEEeecccCcccEEEEEcCCCCCCCCCCCCceEEEEEcCHHHHHHHHHHHhhh
Q 023125 213 MEEADVYGLKLQGQKPVDVNYSINGVGEQGVVLVLAGPEEDSGRGRDRGSTVTVVLPENQLEKLMNELNQE 283 (287)
Q Consensus 213 w~~~~~y~~DFG~G~P~~v~~~~~~~~~~g~~~ilp~~~~~g~~~~~~g~ev~v~L~~~~m~~l~~~~~~~ 283 (287)
|+++++|++|||||||+++++.. ...+|.++++|+++++| |++|.|+|++++|++|++++.+.
T Consensus 387 w~~~~~y~~DFG~G~P~~v~~~~--~~~~g~~~l~p~~~~~g------gi~v~v~L~~~~m~~f~~~~~~~ 449 (454)
T 2e1v_A 387 TPKLRFYDMDFGWGKPKKLETVS--IDHNGAISINSCKESNE------DLEIGVCISATQMEDFVHIFDDG 449 (454)
T ss_dssp CTTSCGGGCCSSSCSCSEEEEGG--GGGSSEEEEEECSSCTT------SEEEEEEEEHHHHHHHHHHHHHH
T ss_pred CCCCCcccccccCccceEEEeee--eCCCCeEEEEecCCCCC------CEEEEEEECHHHHHHHHHHHHHH
Confidence 99999999999999999998753 22568999999876544 89999999999999999988763
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=7.3e-46 Score=348.03 Aligned_cols=260 Identities=15% Similarity=0.222 Sum_probs=200.1
Q ss_pred CeeeeeeeccccCHHHHHHHHHHHHHHHc-CC-C---C--CCCCCCCCCCCCCCccccccccccCccccCCCCCccccCC
Q 023125 1 MSLGLSWAHVLGDPFSASAFVSMWAQIMA-GR-V---P--PKSLHEPEPEPEPEKSETETQTRASESVAGNLYPIKRVDP 73 (287)
Q Consensus 1 ~~lg~~~~H~v~Dg~~~~~fl~aWa~~~r-g~-~---p--~~~~~~~~~l~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (287)
++||+++||.++||.|+.+|+++||++|| |. . + ..|.+|+..+..|+... +. +...+....... +
T Consensus 157 ~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~p~~~~--~~---~~~~~~~~~~~~---~ 228 (453)
T 2xr7_A 157 ISIGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKDPNGVG--MS---IWNEMKKYKHMM---K 228 (453)
T ss_dssp EEEEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCCSSCHH--HH---TTTTGGGCTTTS---C
T ss_pred EEEEEeeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCccccccccCCCCcc--hH---HHHhccccCCcc---c
Confidence 58999999999999999999999999999 87 2 2 24677887765443321 11 000000000000 0
Q ss_pred CCCCCCCCCCCceeEEEEEeCHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhcc-------CCCcEEEEEe
Q 023125 74 VGDHWQFPNNCNIKTHTFQFTKKQLDQMASNLRYRGIREAAAVSHFEVISATIWKLLAKASED-------SGPGVVTICR 146 (287)
Q Consensus 74 ~~~~~~~~~~~~~~~~~f~~s~~~l~~Lk~~~~~~~~~~~~~~S~~dal~A~~W~~~~~ar~~-------~~~~~l~~~v 146 (287)
.. ..+...+..+++|+|++++|++||+.+.+.... ..++|+||+|+||+|+|++|||.. ++.+.+.++|
T Consensus 229 --~~-~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~-~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~v 304 (453)
T 2xr7_A 229 --MS-DVVTPPDKVRGTFIITRHDIGKLKNLVLTRRPK-LTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAA 304 (453)
T ss_dssp --CS-CCCCCCSCCCEEEEECHHHHHHHHHHHHHHSCC-CSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEEC
T ss_pred --cc-cccCCCCceEEEEEECHHHHHHHHHHHhhcCCC-CCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEe
Confidence 00 001134567899999999999999999765421 257999999999999999999863 3467899999
Q ss_pred cCCCC-----CCCCCCcceEEeeeeec-ccccC-CCHHHHHHHHHHHHhh--hhHh-hhhccccceee------CCcEEE
Q 023125 147 YNGQR-----ENETASNDMVLSTAEVD-FDVSK-SDVWELSTLIADKRKD--VDEK-VLSESSDFIMY------GANLTF 210 (287)
Q Consensus 147 d~R~r-----~~~y~GN~~~~~~~~~~-~~l~~-~~l~~~A~~ir~a~~~--~~~~-~~~~~~d~~~~------g~~~~~ 210 (287)
|+|+| |++|+||++..+.+.++ +||.. .+|..+|.+||+++++ ++++ |+++ |++.. +..+.+
T Consensus 305 d~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~~~~~~~~~~~~~~~~v 382 (453)
T 2xr7_A 305 DCRAQFNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--SWFKEYDKVDAKRSLSV 382 (453)
T ss_dssp CTTSCSSSCCCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--CTTSCCCCSCGGGEEEE
T ss_pred cccccCCCCCCcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--HHHHHHHhhccCCcEEE
Confidence 99999 46799999999988877 78884 8999999999999999 5777 8887 66532 247999
Q ss_pred EeCCCCcccceecCCCCceeEEEeecccCccc--EEEEEcCCCCCCCCCCCCceEEEEEcCHHHHHHHHHHHhh
Q 023125 211 VDMEEADVYGLKLQGQKPVDVNYSINGVGEQG--VVLVLAGPEEDSGRGRDRGSTVTVVLPENQLEKLMNELNQ 282 (287)
Q Consensus 211 tsw~~~~~y~~DFG~G~P~~v~~~~~~~~~~g--~~~ilp~~~~~g~~~~~~g~ev~v~L~~~~m~~l~~~~~~ 282 (287)
|||+++++|++|||||||+++++. ....+| .++++|+++++| |++|.|+|++++|++|++++.+
T Consensus 383 ssw~~~~~y~~DFG~G~P~~v~~~--~~~~~g~~~~~l~~~~~~~g------gi~v~v~L~~~~m~~f~~~~~~ 448 (453)
T 2xr7_A 383 AGSPKLDLYAADFGWGRPEKLEFV--SIDNDDGISMSLSKSKDSDG------DLEIGLSLSKTRMNAFAAMFTH 448 (453)
T ss_dssp CSCSSCCGGGCCCSSCSCSEEEEG--GGSSCSSCEEEEEECSSSTT------CEEEEECCCHHHHHHHHHHHHH
T ss_pred eccccCCccccccCCCcceEEEee--eecCCCceEEEEeecCCCCC------CEEEEEEeCHHHHHHHHHHHHH
Confidence 999999999999999999999874 333568 888998775543 8999999999999999998875
No 4
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=6.4e-46 Score=348.15 Aligned_cols=262 Identities=11% Similarity=0.096 Sum_probs=197.4
Q ss_pred CeeeeeeeccccCHHHHHHHHHHHHHHHcCCC-CC----CCCCCCCCCC-----CCCccccccccccCccccCCCCCccc
Q 023125 1 MSLGLSWAHVLGDPFSASAFVSMWAQIMAGRV-PP----KSLHEPEPEP-----EPEKSETETQTRASESVAGNLYPIKR 70 (287)
Q Consensus 1 ~~lg~~~~H~v~Dg~~~~~fl~aWa~~~rg~~-p~----~~~~~~~~l~-----~pp~~~~~~~~~~~~~~~~~~~~~~~ 70 (287)
++||+++||.++||.|+.+|+++||++|||.+ +. .|.+++..+. .+|.+. +.| .++..+....
T Consensus 148 ~~lg~~~~H~v~Dg~g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~-----~~~-~~~~~~~~~~- 220 (451)
T 2rkv_A 148 LILTVNGQHGAMDMVGQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGPE-----VDH-QIVKADVAGG- 220 (451)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCGG-----GTT-CBCCTTSCC--
T ss_pred eeeeeeehhccccHHHHHHHHHHHHHHhcCCCCCccccccccCchhhccccccccCCCcc-----ccc-cccCCCCCCC-
Confidence 58999999999999999999999999999976 21 3567766431 112221 111 1121110000
Q ss_pred cCCCCCCCCCCCCCceeEEEEEeCHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhh-c-c--CCCcEEEEEe
Q 023125 71 VDPVGDHWQFPNNCNIKTHTFQFTKKQLDQMASNLRYRGIREAAAVSHFEVISATIWKLLAKAS-E-D--SGPGVVTICR 146 (287)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~f~~s~~~l~~Lk~~~~~~~~~~~~~~S~~dal~A~~W~~~~~ar-~-~--~~~~~l~~~v 146 (287)
... ....++.+++|+|++++|++||+.+.+....+..++|+||+|+||+|+|++||| . . ++.+.+.++|
T Consensus 221 -----~~~--~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~v 293 (451)
T 2rkv_A 221 -----DAV--LTPVSASWAFFTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAV 293 (451)
T ss_dssp -------------CCEEEEEEEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEE
T ss_pred -----CCC--CCCCCceEEEEEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEe
Confidence 000 123467899999999999999999976542112579999999999999999998 3 2 3578899999
Q ss_pred cCCCC---CCCCCCcceEEeeeeec-ccccCCCHHHHHHHHHHHHhhhhHhh-hhcccccee---------------eCC
Q 023125 147 YNGQR---ENETASNDMVLSTAEVD-FDVSKSDVWELSTLIADKRKDVDEKV-LSESSDFIM---------------YGA 206 (287)
Q Consensus 147 d~R~r---~~~y~GN~~~~~~~~~~-~~l~~~~l~~~A~~ir~a~~~~~~~~-~~~~~d~~~---------------~g~ 206 (287)
|+|+| |++|+||++..+.+.++ +++.+.+|+.+|.+||+++.++++++ +++.++++. .+.
T Consensus 294 d~R~rl~lP~~y~GN~~~~~~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (451)
T 2rkv_A 294 DARPAMGVSNNYPGLLQNMTYHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLATYLHNNPDKSNVSLTADADPST 373 (451)
T ss_dssp ECHHHHTCCTTCCSCCEEEEEEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTBCTTTTCCTTT
T ss_pred cccccCCCCCCCcccceeeecccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHHHHhcCCCccccccccccCCCC
Confidence 99999 77899999999998877 78889999999999999999988888 666544321 124
Q ss_pred cEEEEeCCCCcccceecC--CCCceeEEEeecccCcccEEEEEcCCCCCCCCCCCCceEEEEEcCHHHHHHHHHHHhhhh
Q 023125 207 NLTFVDMEEADVYGLKLQ--GQKPVDVNYSINGVGEQGVVLVLAGPEEDSGRGRDRGSTVTVVLPENQLEKLMNELNQEW 284 (287)
Q Consensus 207 ~~~~tsw~~~~~y~~DFG--~G~P~~v~~~~~~~~~~g~~~ilp~~~~~g~~~~~~g~ev~v~L~~~~m~~l~~~~~~~~ 284 (287)
++.+|||+++++|++||| ||||++++... ....+|.++++|.. ++ +|++|.|+|++++|++|+++ +||
T Consensus 374 ~~~~ssw~~~~~y~~DFG~gwG~P~~v~~~~-~~~~~g~~~~~p~~-~~------ggi~v~v~L~~~~m~~f~~d--~ef 443 (451)
T 2rkv_A 374 SVMLSSWAKVGLWDYDFGLGLGKPETVRRPI-FEPVESLMYFMPKK-PD------GEFCAALSLRDEDMDRLKAD--KEW 443 (451)
T ss_dssp CEEEEECTTCCGGGCCTTCSSCSCSEEECCB-CSCCTTEEEECCCC-TT------SCEEEEEEEEHHHHHHHHHC--HHH
T ss_pred CEEEeccccCCccccccCCCCCCceEEEcCC-ccCCCCEEEEecCC-CC------CCEEEEEEeCHHHHHHHhcC--HHH
Confidence 699999999999999998 89999987531 12246899999753 33 47999999999999999873 455
Q ss_pred cc
Q 023125 285 NL 286 (287)
Q Consensus 285 ~~ 286 (287)
.+
T Consensus 444 ~~ 445 (451)
T 2rkv_A 444 TK 445 (451)
T ss_dssp HT
T ss_pred Hh
Confidence 43
No 5
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=3.2e-45 Score=340.68 Aligned_cols=243 Identities=17% Similarity=0.212 Sum_probs=190.9
Q ss_pred CeeeeeeeccccCHHHHHHHHHHHHHHHcCCC-CCCCCCCC-CCCCCCCccccccccccCccccCCCCCccccCCCCCCC
Q 023125 1 MSLGLSWAHVLGDPFSASAFVSMWAQIMAGRV-PPKSLHEP-EPEPEPEKSETETQTRASESVAGNLYPIKRVDPVGDHW 78 (287)
Q Consensus 1 ~~lg~~~~H~v~Dg~~~~~fl~aWa~~~rg~~-p~~~~~~~-~~l~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (287)
++||+++||.++||.|+.+|+++||++|||.. +..|.+++ ..+. |+.. . .+ . + .+
T Consensus 152 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~~l~-p~~~----~---------~~-~-----~---~~ 208 (421)
T 2bgh_A 152 TAIGVNLSHKIADVLSLATFLNAWTATCRGETEIVLPNFDLAARHF-PPVD----N---------TP-S-----P---EL 208 (421)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHTTCSCCCCCBCSHHHHHS-CCCT----T---------CC-C-----C---CC
T ss_pred EEEEEEeeEEechHHHHHHHHHHHHHHhcCCCCCCCCccccccccC-CCcc----c---------CC-C-----C---cc
Confidence 58999999999999999999999999999975 33445555 3221 1100 0 00 0 0 01
Q ss_pred CCCCCCceeEEEEEeCHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhcc----CCCcEEEEEecCCCC---
Q 023125 79 QFPNNCNIKTHTFQFTKKQLDQMASNLRYRGIREAAAVSHFEVISATIWKLLAKASED----SGPGVVTICRYNGQR--- 151 (287)
Q Consensus 79 ~~~~~~~~~~~~f~~s~~~l~~Lk~~~~~~~~~~~~~~S~~dal~A~~W~~~~~ar~~----~~~~~l~~~vd~R~r--- 151 (287)
. ...++.+++|+|++++|++||+.+.+... ..++|+||+|+||+|+|++|||.. ++.+.+.++||+|+|
T Consensus 209 ~--~~~~~~~~~f~f~~~~i~~LK~~a~~~~~--~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~p 284 (421)
T 2bgh_A 209 V--PDENVVMKRFVFDKEKIGALRAQASSASE--EKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNP 284 (421)
T ss_dssp C--CCSSEEEEEEEECHHHHHHHHHHTC-------CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSS
T ss_pred C--CccceEEEEEEECHHHHHHHHHHhhccCC--CCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCC
Confidence 1 23468899999999999999999976532 257999999999999999999864 347899999999999
Q ss_pred --CCCCCCcceEEeeeeec-ccccCCCHHHHHHHHHHHHhhhhHhhhhcccccee----eC--CcEEEEeCCCCccccee
Q 023125 152 --ENETASNDMVLSTAEVD-FDVSKSDVWELSTLIADKRKDVDEKVLSESSDFIM----YG--ANLTFVDMEEADVYGLK 222 (287)
Q Consensus 152 --~~~y~GN~~~~~~~~~~-~~l~~~~l~~~A~~ir~a~~~~~~~~~~~~~d~~~----~g--~~~~~tsw~~~~~y~~D 222 (287)
|++|+||++..+.+.++ ++ +.+|..+|.+||+++++++++|+++..++.. .+ ..+.+|||+|+++|++|
T Consensus 285 plP~~y~GN~~~~~~~~~~~~~--~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~D 362 (421)
T 2bgh_A 285 PLPHYAMGNIATLLFAAVDAEW--DKDFPDLIGPLRTSLEKTEDDHNHELLKGMTCLYELEPQELLSFTSWCRLGFYDLD 362 (421)
T ss_dssp CCCTTBCSCCEEEEEEEECTTC--CCCGGGGHHHHHHHTCCCSSCHHHHHHHHHHHHHTSCGGGEEEEEEETTSCGGGCC
T ss_pred CCCCCccceEEEEEEEEecccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEeccccCCCcccc
Confidence 46799999999888776 44 7899999999999999998888876555421 11 35899999999999999
Q ss_pred cCCCCceeEEEeecccCcccEEEEEcCCCCCCCCCCCCceEEEEEcCHHHHHHHHHHHh
Q 023125 223 LQGQKPVDVNYSINGVGEQGVVLVLAGPEEDSGRGRDRGSTVTVVLPENQLEKLMNELN 281 (287)
Q Consensus 223 FG~G~P~~v~~~~~~~~~~g~~~ilp~~~~~g~~~~~~g~ev~v~L~~~~m~~l~~~~~ 281 (287)
||||||+++++. ....+|.++++|++++ +|++|.|+|++++|++|++|+.
T Consensus 363 FGwGkP~~v~~~--~~~~~g~~~~~p~~~~-------~gi~v~v~L~~~~m~~f~~e~~ 412 (421)
T 2bgh_A 363 FGWGKPLSACTT--TFPKRNAALLMDTRSG-------DGVEAWLPMAEDEMAMLPVELL 412 (421)
T ss_dssp SSSCCCSEEECC--CCCSTTEEEEEECTTS-------SSEEEEEEEEHHHHHHSCHHHH
T ss_pred cCCCccCeeccc--ccCcCCEEEEEecCCC-------CeEEEEEEcCHHHHHHHHHHHH
Confidence 999999999874 3335699999998744 3799999999999999988554
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=97.71 E-value=0.0031 Score=56.96 Aligned_cols=180 Identities=13% Similarity=0.018 Sum_probs=94.4
Q ss_pred eeeeeeeccccCHHHHHHHHHHHHHHHc-----CCCCCCC--CCCCCC--C-CCCCccccccccccC-ccccCCCCCccc
Q 023125 2 SLGLSWAHVLGDPFSASAFVSMWAQIMA-----GRVPPKS--LHEPEP--E-PEPEKSETETQTRAS-ESVAGNLYPIKR 70 (287)
Q Consensus 2 ~lg~~~~H~v~Dg~~~~~fl~aWa~~~r-----g~~p~~~--~~~~~~--l-~~pp~~~~~~~~~~~-~~~~~~~~~~~~ 70 (287)
.|.+.+||.++||.|+..|++.+.+..+ |.++..+ .|.... + ............... ...|... .+..
T Consensus 117 ~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~-~l~~ 195 (422)
T 1q9j_A 117 ELTLYLHHCMADGHHGAVLVDELFSRYTDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAY-EIPA 195 (422)
T ss_dssp EEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHHSSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-----
T ss_pred EEEEEeceEEEchhhHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcc-cCCC
Confidence 4789999999999999999999999877 3332211 121000 0 000000000000000 0011000 0000
Q ss_pred cCCCCCCCCCCCCCceeEEEEEeCHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhcc-CCCcEEEEEecCC
Q 023125 71 VDPVGDHWQFPNNCNIKTHTFQFTKKQLDQMASNLRYRGIREAAAVSHFEVISATIWKLLAKASED-SGPGVVTICRYNG 149 (287)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~f~~s~~~l~~Lk~~~~~~~~~~~~~~S~~dal~A~~W~~~~~ar~~-~~~~~l~~~vd~R 149 (287)
..........+.........+.++.+..++|++.+... .+|.+.++.|.+-..+.|-+.. .....+.+++++|
T Consensus 196 ~~~lp~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~------~~t~~~~l~aa~~~~l~r~~~~~~~~v~~g~~~~~R 269 (422)
T 1q9j_A 196 TETPAVLAHPGLPQAVPVTRLWLSKQQTSDLMAFGREH------RLSLNAVVAAAILLTEWQLRNTPHVPIPYVYPVDLR 269 (422)
T ss_dssp ---------CCSBCCCCEEEECCCHHHHHHHHHHHTTT------TCCHHHHHHHHHHHHHHHHHTCSSCCEEEEEEEETT
T ss_pred cccCCCCCCCCCCCCccceEEEeCHHHHHHHHHHHHHh------CCCHHHHHHHHHHHHHHhcccCCCceEEEeeeeecc
Confidence 00000000011122245788899999999999998643 4799999999876666654222 3467777889999
Q ss_pred CC--CC---CCCCcceEEeeeeecccccCCCHHHHHHHHHHHHhh
Q 023125 150 QR--EN---ETASNDMVLSTAEVDFDVSKSDVWELSTLIADKRKD 189 (287)
Q Consensus 150 ~r--~~---~y~GN~~~~~~~~~~~~l~~~~l~~~A~~ir~a~~~ 189 (287)
.. |+ .=..|.+.+.....+.. .+.++..++..+++.+.+
T Consensus 270 ~~~~~~~~~~~~~~~vG~f~n~lp~~-~~~~~~~~l~~v~~~~~~ 313 (422)
T 1q9j_A 270 FVLAPPVAPTEATNLLGAASYLAEIG-PNTDIVDLASDIVATLRA 313 (422)
T ss_dssp TTSSSCCCTTTBSCCEEEEEEEECCC-SSCCHHHHHHHHHHHHHH
T ss_pred cccCCCCChhhhhhhheeeeeeeecc-CCCCHHHHHHHHHHHHHH
Confidence 87 21 22334332222222211 134677788877777765
No 7
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=97.29 E-value=0.018 Score=52.27 Aligned_cols=171 Identities=8% Similarity=-0.029 Sum_probs=97.5
Q ss_pred eeeeeeeccccCHHHHHHHHHHHHHHHc----CCCCCCCCCCCCCC-------CCCCccccccccccCc--cccCCCCCc
Q 023125 2 SLGLSWAHVLGDPFSASAFVSMWAQIMA----GRVPPKSLHEPEPE-------PEPEKSETETQTRASE--SVAGNLYPI 68 (287)
Q Consensus 2 ~lg~~~~H~v~Dg~~~~~fl~aWa~~~r----g~~p~~~~~~~~~l-------~~pp~~~~~~~~~~~~--~~~~~~~~~ 68 (287)
.|-+.+||.++||.|+..|++.+.+... |..+..+...-.+. ........+.. +=.. ....++..+
T Consensus 119 ~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~W~~~l~~~~~~~~l 197 (436)
T 1l5a_A 119 LIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKPYQSYLEEEAAYLTSHRYWQDKQ-FWQGYLREAPDLTLT 197 (436)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCHHHHHHHHHHHHTSHHHHHHHH-HHHHHHHTSCCCCBC
T ss_pred EEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhccHhHHHHHH-HHHHHhcCCCCcccC
Confidence 4678999999999999999999999887 44432111000000 00000000000 0000 000000001
Q ss_pred cccCCCCCCCCCCCCCceeEEEEEeCHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCcEEEEEecC
Q 023125 69 KRVDPVGDHWQFPNNCNIKTHTFQFTKKQLDQMASNLRYRGIREAAAVSHFEVISATIWKLLAKASEDSGPGVVTICRYN 148 (287)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~f~~s~~~l~~Lk~~~~~~~~~~~~~~S~~dal~A~~W~~~~~ar~~~~~~~l~~~vd~ 148 (287)
+. . ............+.++.+..++|++.+... .+|.+.++.|.+-..+.+-.+ +...+.+++++
T Consensus 198 ---p~--~--~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~------~~t~~~~l~aa~~~~L~~~~g--~dv~ig~~~~~ 262 (436)
T 1l5a_A 198 ---SA--T--YDPQLSHAVSLSYTLNSQLNHLLLKLANAN------QIGWPDALVALCALYLESAEP--DAPWLWLPFMN 262 (436)
T ss_dssp ---CT--T--CCGGGCCEEEEEEECCHHHHHHHHHHHHHT------TCCHHHHHHHHHHHHHHHHST--TCCEEEEEECC
T ss_pred ---CC--C--CCCCcccceeeEEecCHHHHHHHHHHHHHh------CCCHHHHHHHHHHHHHHHhhC--CceEEeeeccc
Confidence 00 0 000122345778999999999999998754 478999998887666655544 67788888999
Q ss_pred CCC--CCCCCCcceEEeeeeecccccCCCHHHHHHHHHHHHhh
Q 023125 149 GQR--ENETASNDMVLSTAEVDFDVSKSDVWELSTLIADKRKD 189 (287)
Q Consensus 149 R~r--~~~y~GN~~~~~~~~~~~~l~~~~l~~~A~~ir~a~~~ 189 (287)
|.. -.+-+|+++-....+...+ .+.++..++..+++.+.+
T Consensus 263 R~~~~~~~~vG~f~n~lplr~~~~-~~~t~~~~l~~v~~~~~~ 304 (436)
T 1l5a_A 263 RWGSVAANVPGLMVNSLPLLRLSA-QQTSLGNYLKQSGQAIRS 304 (436)
T ss_dssp CTTSGGGGSCSCCCEEEEEECCCC-TTCBHHHHHHHHHHHHHH
T ss_pred CCChHHhcCcceEEEEEEEEEecC-CCCCHHHHHHHHHHHHHH
Confidence 987 2346666654333333211 234678888888777655
No 8
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=97.18 E-value=0.015 Score=54.28 Aligned_cols=177 Identities=12% Similarity=0.024 Sum_probs=98.8
Q ss_pred eeeeeeeccccCHHHHHHHHHHHHHHHcCCC-CCCC-CCCCCC-----CCCCCccccccccccCccccCCCCCccccCCC
Q 023125 2 SLGLSWAHVLGDPFSASAFVSMWAQIMAGRV-PPKS-LHEPEP-----EPEPEKSETETQTRASESVAGNLYPIKRVDPV 74 (287)
Q Consensus 2 ~lg~~~~H~v~Dg~~~~~fl~aWa~~~rg~~-p~~~-~~~~~~-----l~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (287)
.|-+++||.++||.|+..|++.+.+..++.. |..+ .|.... ....+....+.. +=. ..+...++...++..
T Consensus 215 ~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~~~l~~~~~~~~d~~~~~~~~~~~~~~~~~~~-yW~-~~l~~~~~~~~lp~~ 292 (520)
T 2jgp_A 215 VLFTDMHHSISDGVSSGILLAEWVQLYQGDVLPELRIQYKDFAVWQQEFSQSAAFHKQEA-YWL-QTFADDIPVLNLPTD 292 (520)
T ss_dssp EEEEEEBGGGCCHHHHHHHHHHHHHHHTTCCCCCCSCCHHHHHHHHHHHTTSHHHHHHHH-HHH-HHTSSCCCCCCCCCS
T ss_pred EEEEEccceeecHhHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcChhhHHHHH-HHH-HHhCCCCCcCCCCCC
Confidence 4678999999999999999999999998864 2211 110000 000000000000 000 000000000000000
Q ss_pred CCCCCCCCCCceeEEEEEeCHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCcEEEEEecCCCC--C
Q 023125 75 GDHWQFPNNCNIKTHTFQFTKKQLDQMASNLRYRGIREAAAVSHFEVISATIWKLLAKASEDSGPGVVTICRYNGQR--E 152 (287)
Q Consensus 75 ~~~~~~~~~~~~~~~~f~~s~~~l~~Lk~~~~~~~~~~~~~~S~~dal~A~~W~~~~~ar~~~~~~~l~~~vd~R~r--~ 152 (287)
...............+.++.+..++|++.+... .+|.+.++.|.+-..+.+-.+ .+...+.+++++|.. -
T Consensus 293 -~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~------~~T~~~~l~aa~a~~L~~~~~-~~dv~~g~~~~gR~~~~~ 364 (520)
T 2jgp_A 293 -FTRPSTQSFAGDQCTIGAGKALTEGLHQLAQAT------GTTLYMVLLAAYNVLLAKYAG-QEDIIVGTPITGRSHADL 364 (520)
T ss_dssp -SCCCSSCCCBEEEEEEECCHHHHHHHHHHHHHH------TCCHHHHHHHHHHHHHHHHHT-CSCEEEEEEECCCCSGGG
T ss_pred -CCCCCCCCCCccEEEEeCCHHHHHHHHHHHHHc------CCCHHHHHHHHHHHHHHHhcC-CCCeEEEeccCCCCchhh
Confidence 000001122345678999999999999998654 368899988876555544433 357788888999987 3
Q ss_pred CCCCCcceEEeeeeecccccCCCHHHHHHHHHHHHhh
Q 023125 153 NETASNDMVLSTAEVDFDVSKSDVWELSTLIADKRKD 189 (287)
Q Consensus 153 ~~y~GN~~~~~~~~~~~~l~~~~l~~~A~~ir~a~~~ 189 (287)
.+-+|+++-....+...+ .+.++..+...+++.+.+
T Consensus 365 ~~~vG~f~n~lplr~~~~-~~~~~~~~l~~v~~~~~~ 400 (520)
T 2jgp_A 365 EPIVGMFVNTLAMRNKPQ-REKTFSEFLQEVKQNALD 400 (520)
T ss_dssp TTCCSCCCEEEEEEECCC-TTSBHHHHHHHHHHHHHH
T ss_pred hccEEeeeeeeeEEecCC-CCCCHHHHHHHHHHHHHH
Confidence 456777654444443211 234677888877776654
No 9
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=96.78 E-value=0.0041 Score=57.75 Aligned_cols=170 Identities=11% Similarity=-0.039 Sum_probs=93.4
Q ss_pred eeeeeeeccccCHHHHHHHHHHHHHHHcCCCCCCCCC-C-----CC--CCCCCCccccccccccCccccCCCCCccccCC
Q 023125 2 SLGLSWAHVLGDPFSASAFVSMWAQIMAGRVPPKSLH-E-----PE--PEPEPEKSETETQTRASESVAGNLYPIKRVDP 73 (287)
Q Consensus 2 ~lg~~~~H~v~Dg~~~~~fl~aWa~~~rg~~p~~~~~-~-----~~--~l~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (287)
.|-+.+||.++||.|+..|++.+.+...|..+. +.| + .. .+. .+....+.. +=. ..+...+++ .
T Consensus 135 ~l~l~~HH~i~Dg~S~~~l~~~l~~~Y~g~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~-~W~-~~l~~~~~l----~ 206 (493)
T 4hvm_A 135 VLGVVAHQMLLDARSRYMVLGAVWQAYYGRFRP-AQYRDFAEVADFHPLDR-ETVRVARHR-WWS-RRLPALPVR----G 206 (493)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHHHHTTCCCG-GGSBCGGGTTTCCTTCS-HHHHHHHHH-HHH-HHGGGSCCC----C
T ss_pred EEEEecchhhccHHHHHHHHHHHHHHhCCCCCC-cCHHHHHHHHhhhhccc-ChhhHHHHH-HHH-HhccCCCCC----C
Confidence 467899999999999999999999999887633 222 1 11 000 000000000 000 000000001 0
Q ss_pred CCCCCCCCCCCceeEEEEEeCHHHHHHHHHHhhhcCCCCCCCCC--HHHHHHHHHHHHHHhhhc---------c-CCCcE
Q 023125 74 VGDHWQFPNNCNIKTHTFQFTKKQLDQMASNLRYRGIREAAAVS--HFEVISATIWKLLAKASE---------D-SGPGV 141 (287)
Q Consensus 74 ~~~~~~~~~~~~~~~~~f~~s~~~l~~Lk~~~~~~~~~~~~~~S--~~dal~A~~W~~~~~ar~---------~-~~~~~ 141 (287)
+. ..+.. ......+.++.+..++|++.+.+. .+| .+.++.|.+-..+.+-+. . .....
T Consensus 207 --~~-~~~~~-~~~~~~~~l~~~~~~~l~~~a~~~------~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~ 276 (493)
T 4hvm_A 207 --GD-GGPVG-PPETSRLRVPGSRWQALTEPGGPL------GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLY 276 (493)
T ss_dssp -----------CCEEEEEEEEHHHHHHHHCC------------CHHHHHHHHHHHHHHHC----------------CEEE
T ss_pred --CC-CCCCC-CCeeEEEEcCHHHHHHHHHHHHHc------CCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEE
Confidence 00 01111 156778999999999999887543 468 999998887655554410 1 23566
Q ss_pred EEEEecCCCC--CCCCCCcceEEeeeeec-ccccCCCHHHHHHHHHHHHhh
Q 023125 142 VTICRYNGQR--ENETASNDMVLSTAEVD-FDVSKSDVWELSTLIADKRKD 189 (287)
Q Consensus 142 l~~~vd~R~r--~~~y~GN~~~~~~~~~~-~~l~~~~l~~~A~~ir~a~~~ 189 (287)
+.+++++|.. -.+.+|+++-....+.. ....+.++..++..+++.+.+
T Consensus 277 ~g~~~~gR~~~~~~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~ 327 (493)
T 4hvm_A 277 LSTEVDLRDHLQLGSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLD 327 (493)
T ss_dssp EEEEEEHHHHTTCCSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHH
T ss_pred EEeeccCCCCcchhcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHH
Confidence 7778999876 34577877654444443 111145688888888887665
No 10
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=96.39 E-value=0.14 Score=48.09 Aligned_cols=79 Identities=5% Similarity=-0.072 Sum_probs=55.5
Q ss_pred eeEEEEEeCHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhc---c--CCCcEEEEEecCCCC-CC----CC
Q 023125 86 IKTHTFQFTKKQLDQMASNLRYRGIREAAAVSHFEVISATIWKLLAKASE---D--SGPGVVTICRYNGQR-EN----ET 155 (287)
Q Consensus 86 ~~~~~f~~s~~~l~~Lk~~~~~~~~~~~~~~S~~dal~A~~W~~~~~ar~---~--~~~~~l~~~vd~R~r-~~----~y 155 (287)
-....+.|++++.++|++.|.+..+ ..+|-..+|.|.+-.++.+... . .......++||+|++ ++ +|
T Consensus 277 ~~~~~~~ls~~~t~~L~~~ck~~~~---~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~~~~n~ 353 (519)
T 3fot_A 277 PRCVIHKLSADESIDIVKAVKTRLG---PGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLREDIASNF 353 (519)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHTC---TTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHHHHTSC
T ss_pred cceEEEEcCHHHHHHHHHHHHhcCC---CCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCcccccc
Confidence 3456889999999999999987632 3579999997777666655322 1 124566778999998 43 47
Q ss_pred CCcceEEeeeee
Q 023125 156 ASNDMVLSTAEV 167 (287)
Q Consensus 156 ~GN~~~~~~~~~ 167 (287)
+|.+........
T Consensus 354 ~~~~~~~~~~~v 365 (519)
T 3fot_A 354 YAMCQTAAVVRI 365 (519)
T ss_dssp CSCCEEEEEEEE
T ss_pred cceeeeeeeeEe
Confidence 888776555443
No 11
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=96.21 E-value=0.69 Score=41.98 Aligned_cols=99 Identities=8% Similarity=0.069 Sum_probs=65.6
Q ss_pred ceeEEEEEeCHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCcEEEEEecCCCCC------CCCCCc
Q 023125 85 NIKTHTFQFTKKQLDQMASNLRYRGIREAAAVSHFEVISATIWKLLAKASEDSGPGVVTICRYNGQRE------NETASN 158 (287)
Q Consensus 85 ~~~~~~f~~s~~~l~~Lk~~~~~~~~~~~~~~S~~dal~A~~W~~~~~ar~~~~~~~l~~~vd~R~r~------~~y~GN 158 (287)
......+.++.+..++|++.+... ..+|.++++.|.+-..+.+-.+ .....+.+.+++|..+ .+-+|+
T Consensus 232 ~~~~~~~~l~~~~~~~l~~~~~~~-----~~~t~~~~llaa~~~~l~~~~~-~~dv~ig~~~~gR~~~~~~~~~~~~vG~ 305 (466)
T 2xhg_A 232 SVRNMRIRLHPEETEQLLKHANQA-----YQTEINDLLLAALGLAFAEWSK-LAQIVIHLEGHGREDIIEQANVARTVGW 305 (466)
T ss_dssp GEEEEEEECCHHHHHHHHHTGGGT-----TTCCHHHHHHHHHHHHHHHHHC-CSEEEEEEEECCCCSCSTTCCCTTCCSC
T ss_pred cceEEEEEcCHHHHHHHHHHhHHh-----hCCCHHHHHHHHHHHHHHHHhC-CCceEEEecCCCCCccccCCCccccccc
Confidence 345678999999999999877432 2478999998887665554433 3456777789999762 235666
Q ss_pred ceEEeeeeecccccCCCHHHHHHHHHHHHhhh
Q 023125 159 DMVLSTAEVDFDVSKSDVWELSTLIADKRKDV 190 (287)
Q Consensus 159 ~~~~~~~~~~~~l~~~~l~~~A~~ir~a~~~~ 190 (287)
.+-....+...+ .+.++..++..|++.+..+
T Consensus 306 f~n~lplr~~~~-~~~~~~~~l~~v~~~~~~~ 336 (466)
T 2xhg_A 306 FTSQYPVLLDLK-QTAPLSDYIKLTKENMRKI 336 (466)
T ss_dssp CCEEEEEEEECS-CCCSHHHHHHHHHHHHHHS
T ss_pred eeeeccEEEecC-CCCCHHHHHHHHHHHHHhC
Confidence 654333333210 1346888888888887664
No 12
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=95.23 E-value=0.64 Score=48.48 Aligned_cols=173 Identities=8% Similarity=0.000 Sum_probs=94.3
Q ss_pred eeeeeeeccccCHHHHHHHHHHHHHHHcC----CCCCCC---CCCCCC--CCCCCccccccccccCc--cccCCCCCccc
Q 023125 2 SLGLSWAHVLGDPFSASAFVSMWAQIMAG----RVPPKS---LHEPEP--EPEPEKSETETQTRASE--SVAGNLYPIKR 70 (287)
Q Consensus 2 ~lg~~~~H~v~Dg~~~~~fl~aWa~~~rg----~~p~~~---~~~~~~--l~~pp~~~~~~~~~~~~--~~~~~~~~~~~ 70 (287)
.|-+++||.++||.|+..|++.+.++.++ .++..+ .|.... +... ....+.. +=.. ..+..+..+..
T Consensus 140 ~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~-~~~~~~~-yW~~~L~~~~~~~~lp~ 217 (1304)
T 2vsq_A 140 EWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQ-DKQASLR-YWREYLEGFEGQTTFAE 217 (1304)
T ss_dssp EEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTS-CHHHHHH-HHHHHHTTCCCCCTTTT
T ss_pred EEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcc-hhhHHHH-HHHHHhCCCCccccCCC
Confidence 46789999999999999999999997764 322111 110000 0000 0000000 0000 00000001110
Q ss_pred cCCCCCCCCCCCCCceeEEEEEeCHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCcEEEEEecCCC
Q 023125 71 VDPVGDHWQFPNNCNIKTHTFQFTKKQLDQMASNLRYRGIREAAAVSHFEVISATIWKLLAKASEDSGPGVVTICRYNGQ 150 (287)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~f~~s~~~l~~Lk~~~~~~~~~~~~~~S~~dal~A~~W~~~~~ar~~~~~~~l~~~vd~R~ 150 (287)
...............|.++++..++||+.+.+. .+|.+.+|.|.+-..+.|-.+ .+...+..++.+|.
T Consensus 218 -----~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~------~~T~~~vllaa~a~~L~r~tg-~~dvv~G~pvsgR~ 285 (1304)
T 2vsq_A 218 -----QRKKQKDGYEPKELLFSPSEAETKAFTELAKSQ------HTTLSTALQAVWSVLISRYQQ-SGDLAFGTVVSGRP 285 (1304)
T ss_dssp -----TCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHT------TCCHHHHHHHHHHHHHHHHHT-CSEEEEEEEECCCC
T ss_pred -----CCCccccccCcceEEEecCHHHHHHHHHHHHHc------CCCHHHHHHHHHHHHHHHhcC-CCCEEEEEEeCCCC
Confidence 000000122345677899999999999999754 368899988876554443322 34677888899998
Q ss_pred C--C--CCCCCcceEEeeeeecccccCCCHHHHHHHHHHHHhh
Q 023125 151 R--E--NETASNDMVLSTAEVDFDVSKSDVWELSTLIADKRKD 189 (287)
Q Consensus 151 r--~--~~y~GN~~~~~~~~~~~~l~~~~l~~~A~~ir~a~~~ 189 (287)
. + .+-+|+.+-....+...+ .+.++.++...+++.+.+
T Consensus 286 ~~~~~~~~~vG~fvntlplr~~~~-~~~s~~~ll~~v~~~~~~ 327 (1304)
T 2vsq_A 286 AEIKGVEHMVGLFINVVPRRVKLS-EGITFNGLLKRLQEQSLQ 327 (1304)
T ss_dssp TTSTTGGGCCSSCCEEEEEEEECC-TTCBHHHHHHHHHHHHHH
T ss_pred ccchhhhcccccceeEEEEEecCC-CCCcHHHHHHHHHHHHHH
Confidence 7 3 235566543333333210 234688888888876654
No 13
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=72.54 E-value=4.9 Score=24.40 Aligned_cols=38 Identities=13% Similarity=0.198 Sum_probs=27.8
Q ss_pred eEEEEEeCHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 023125 87 KTHTFQFTKKQLDQMASNLRYRGIREAAAVSHFEVISATIWKLLAKAS 134 (287)
Q Consensus 87 ~~~~f~~s~~~l~~Lk~~~~~~~~~~~~~~S~~dal~A~~W~~~~~ar 134 (287)
.+..|+||+++-+.|++.|.++.. .+..++=|.+.|+.
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE~e----------SV~sfIKR~IlK~l 39 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEEEE----------SVGSYIKRYILKAL 39 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTTS----------CTTHHHHHHHHHHH
T ss_pred ceEEEEecHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHH
Confidence 356899999999999999987762 23345556666664
No 14
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=62.29 E-value=12 Score=23.59 Aligned_cols=40 Identities=15% Similarity=0.092 Sum_probs=31.8
Q ss_pred eeEEEEEeCHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHhhhc
Q 023125 86 IKTHTFQFTKKQLDQMASNLRYRGIREAAAVSHFEVISATIWKLLAKASE 135 (287)
Q Consensus 86 ~~~~~f~~s~~~l~~Lk~~~~~~~~~~~~~~S~~dal~A~~W~~~~~ar~ 135 (287)
.-+..|+||+++-+.|.+.|.++. |.+..++=|.+.|+..
T Consensus 15 ~~~Vs~Y~SkEey~~L~klA~eE~----------eSV~sfIKR~IlK~l~ 54 (66)
T 2k1o_A 15 NFSVTFYLSKEEHDVLRRLADEEV----------ESVNSFVKRHILKTII 54 (66)
T ss_dssp CEEEEEEEEHHHHHHHHHHHHTTC----------SCHHHHHHHHHHHHHC
T ss_pred ceEEEEEecHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHH
Confidence 457789999999999999998766 4456677777777754
No 15
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=60.85 E-value=6.1 Score=19.86 Aligned_cols=18 Identities=17% Similarity=0.523 Sum_probs=15.6
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 023125 114 AAVSHFEVISATIWKLLA 131 (287)
Q Consensus 114 ~~~S~~dal~A~~W~~~~ 131 (287)
+-.++.|-|+-|+|+++.
T Consensus 6 svftsqdylsdhlwraln 23 (26)
T 2xl1_A 6 SVFTSQDYLSDHLWRALN 23 (26)
T ss_pred ceeecHHHHHHHHHHHHh
Confidence 457889999999999875
No 16
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=50.51 E-value=9.7 Score=39.02 Aligned_cols=29 Identities=14% Similarity=0.242 Sum_probs=26.1
Q ss_pred eeeeeeeccccCHHHHHHHHHHHHHHHcC
Q 023125 2 SLGLSWAHVLGDPFSASAFVSMWAQIMAG 30 (287)
Q Consensus 2 ~lg~~~~H~v~Dg~~~~~fl~aWa~~~rg 30 (287)
-|+++++|.|+||.-+..||+.+.+....
T Consensus 193 ~lsls~DHRviDGa~aa~FL~~lk~~Le~ 221 (1113)
T 2xt6_A 193 TLTSTYDHRIIQGAESGDFLRTIHQLLLD 221 (1113)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHHHTTC
T ss_pred EEEEEECcceechHHHHHHHHHHHHHHhC
Confidence 48999999999999999999999887764
No 17
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=28.51 E-value=33 Score=20.43 Aligned_cols=19 Identities=21% Similarity=0.209 Sum_probs=14.7
Q ss_pred cCHHHHHHHHHHHhhhhcc
Q 023125 268 LPENQLEKLMNELNQEWNL 286 (287)
Q Consensus 268 L~~~~m~~l~~~~~~~~~~ 286 (287)
+...+|++|++++.+|.++
T Consensus 4 ~~~~dle~~KqEIL~E~Rk 22 (45)
T 1use_A 4 SDYSDLQRVKQELLEEVKK 22 (45)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHH
Confidence 4678899999888877653
Done!