Query 023129
Match_columns 287
No_of_seqs 68 out of 70
Neff 3.0
Searched_HMMs 13730
Date Mon Mar 25 16:51:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023129.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/023129hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bhga3 c.1.8.3 (A:329-632) be 54.1 1.3 9.8E-05 34.8 0.2 39 119-157 37-75 (304)
2 d1jz8a5 c.1.8.3 (A:334-625) be 45.7 3.5 0.00025 32.8 1.4 39 118-156 37-75 (292)
3 d1yq2a5 c.1.8.3 (A:313-609) be 33.2 6.4 0.00047 31.6 1.1 38 119-156 37-74 (297)
4 d2je8a5 c.1.8.3 (A:331-678) Fi 33.1 6.6 0.00048 30.9 1.2 36 120-155 47-84 (348)
5 d1d0qa_ g.41.3.2 (A:) Zinc-bin 25.8 9.5 0.00069 27.5 0.8 31 128-158 66-97 (102)
6 d1yq2a2 b.1.4.1 (A:220-312) be 25.2 8 0.00058 26.7 0.3 15 260-274 61-75 (93)
7 d2vzsa5 c.1.8.3 (A:336-674) Ex 23.8 10 0.00073 30.1 0.7 39 119-157 40-78 (339)
8 d2f96a1 c.55.3.5 (A:19-220) Ri 22.3 23 0.0017 25.4 2.4 32 146-177 158-194 (202)
9 d2jm6b1 f.1.4.1 (B:147-308) EA 17.2 2E+02 0.014 21.6 7.6 97 142-270 59-159 (162)
10 d1wxma1 d.15.1.5 (A:8-80) A-Ra 17.1 27 0.002 24.5 1.7 31 129-159 9-40 (73)
No 1
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.11 E-value=1.3 Score=34.84 Aligned_cols=39 Identities=15% Similarity=0.144 Sum_probs=30.2
Q ss_pred HHHHHHhccccchhhhhcCCCchHHHHHHHHHhhcCcCC
Q 023129 119 SLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIPC 157 (287)
Q Consensus 119 ~IEsRFqflAaD~~tvLRG~gvsYReILldVC~kLKV~y 157 (287)
.++..|..+..=++|++|-++..+-+.+++.||+++|-.
T Consensus 37 ~~~~d~~~~k~~G~N~iR~~~~~~~~~~~~~cD~~Gilv 75 (304)
T d1bhga3 37 LLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVV 75 (304)
T ss_dssp HHHHHHHHHHHHTCCEEECTTSCCSSTHHHHHSTTCCEE
T ss_pred HHHHHHHHHHHcCCCEEEecCCCChHHHHHHHHhcCCee
Confidence 455666666666699999886667788999999998754
No 2
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]}
Probab=45.70 E-value=3.5 Score=32.84 Aligned_cols=39 Identities=5% Similarity=0.097 Sum_probs=31.6
Q ss_pred HHHHHHHhccccchhhhhcCCCchHHHHHHHHHhhcCcC
Q 023129 118 ASLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIP 156 (287)
Q Consensus 118 ~~IEsRFqflAaD~~tvLRG~gvsYReILldVC~kLKV~ 156 (287)
+.++..|+.+-.=++|++|-++.-..+-.++.||++++-
T Consensus 37 ~~~~~di~l~k~~G~N~iR~~~~p~~~~~~~~~D~~Gil 75 (292)
T d1jz8a5 37 QTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLY 75 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEECTTSCCCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHhcCCCEEEecCCCChHHHHHHHhhcCCe
Confidence 345677788887889999988666777899999999874
No 3
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]}
Probab=33.18 E-value=6.4 Score=31.63 Aligned_cols=38 Identities=8% Similarity=0.037 Sum_probs=30.8
Q ss_pred HHHHHHhccccchhhhhcCCCchHHHHHHHHHhhcCcC
Q 023129 119 SLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIP 156 (287)
Q Consensus 119 ~IEsRFqflAaD~~tvLRG~gvsYReILldVC~kLKV~ 156 (287)
.++.+|+.+-.=|+|++|-+....-+-++|.||++|+-
T Consensus 37 ~~~~di~l~k~~G~N~iR~~h~p~~~~~~d~cD~~Gil 74 (297)
T d1yq2a5 37 GAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFW 74 (297)
T ss_dssp HHHHHHHHHHHTTCCEEEETTSCCCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHCCCCEEEccCCCChHHHHHHHHhcCCE
Confidence 56677788887789999987555667799999999985
No 4
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=33.11 E-value=6.6 Score=30.87 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=24.3
Q ss_pred HHHHHhccccchhhhhcCC--CchHHHHHHHHHhhcCc
Q 023129 120 LESRFLFLAADARSTLRGW--RPSYRNVLLAVRKNLNI 155 (287)
Q Consensus 120 IEsRFqflAaD~~tvLRG~--gvsYReILldVC~kLKV 155 (287)
++..|+..-.=++|++|-+ ...--+.++|.||++||
T Consensus 47 ~~~di~l~ke~G~N~IR~~~~~~~p~~~f~d~cD~~Gi 84 (348)
T d2je8a5 47 YQTLFRDMKEANMNMVRIWGGGTYENNLFYDLADENGI 84 (348)
T ss_dssp HHHHHHHHHHTTCCEEEECTTSCCCCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEecCCCCCCCCHHHHHHHHHCCC
Confidence 4455555555568899942 22226888999999997
No 5
>d1d0qa_ g.41.3.2 (A:) Zinc-binding domain of DNA primase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=25.80 E-value=9.5 Score=27.53 Aligned_cols=31 Identities=10% Similarity=0.037 Sum_probs=26.4
Q ss_pred ccchhhhhcCC-CchHHHHHHHHHhhcCcCCC
Q 023129 128 AADARSTLRGW-RPSYRNVLLAVRKNLNIPCS 158 (287)
Q Consensus 128 AaD~~tvLRG~-gvsYReILldVC~kLKV~ys 158 (287)
++|.+++++-. +++|.|++-.++++.+|+..
T Consensus 66 ~Gd~i~fv~~~~~~sf~eAv~~La~~~gi~l~ 97 (102)
T d1d0qa_ 66 GGNAFTFLMDIEGIPFVEAAKRLAAKAGVDLS 97 (102)
T ss_dssp EECHHHHHHHHHTCCHHHHHHHHHHHHTCCCG
T ss_pred cccHHHHHHHHHCcCHHHHHHHHHHHhCCCCC
Confidence 56778888764 99999999999999999854
No 6
>d1yq2a2 b.1.4.1 (A:220-312) beta-Galactosidase, domains 2 and 4 {Arthrobacter sp. c2-2 [TaxId: 192168]}
Probab=25.22 E-value=8 Score=26.66 Aligned_cols=15 Identities=33% Similarity=0.306 Sum_probs=11.3
Q ss_pred cceeecCCCchhhhh
Q 023129 260 WLPLIWSPEQPCLQQ 274 (287)
Q Consensus 260 ~~~~~~~~~~~~~~~ 274 (287)
--|-.||||+|.|-.
T Consensus 61 ~~~~lWSaE~P~LY~ 75 (93)
T d1yq2a2 61 ENVEPWSAEVPRLYE 75 (93)
T ss_dssp SSCCCBCSSSBCCEE
T ss_pred CCcccCCCCCCeEEE
Confidence 346779999998743
No 7
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=23.77 E-value=10 Score=30.12 Aligned_cols=39 Identities=8% Similarity=0.090 Sum_probs=29.8
Q ss_pred HHHHHHhccccchhhhhcCCCchHHHHHHHHHhhcCcCC
Q 023129 119 SLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIPC 157 (287)
Q Consensus 119 ~IEsRFqflAaD~~tvLRG~gvsYReILldVC~kLKV~y 157 (287)
.++.+|+.+..=++|++|=++..--+-.+|.||++||-.
T Consensus 40 ~~~~~l~~~k~~G~N~iR~~~~~~~~~f~d~~D~~Gi~V 78 (339)
T d2vzsa5 40 AAADKLKYVLNLGLNTVRLEGHIEPDEFFDIADDLGVLT 78 (339)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCCCCHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHcCCCEEEecCCCCCHHHHHHHHHCCCeE
Confidence 355666666666799999765556678999999999874
No 8
>d2f96a1 c.55.3.5 (A:19-220) Ribonuclease T {Pseudomonas aeruginosa [TaxId: 287]}
Probab=22.34 E-value=23 Score=25.42 Aligned_cols=32 Identities=13% Similarity=0.199 Sum_probs=23.6
Q ss_pred HHHHHhhcCcCCCC---CC--ChHHHHHHHHHHHHhh
Q 023129 146 LLAVRKNLNIPCSS---KL--STEDLEAEIFLHLLQE 177 (287)
Q Consensus 146 LldVC~kLKV~ys~---~l--sT~dIEaeifL~lL~~ 177 (287)
|-.+|++++|.++. +. +-...-++||.+++++
T Consensus 158 L~~~~~~~gi~~~~~~aH~Al~Da~~ta~i~~~l~~~ 194 (202)
T d2f96a1 158 LAKACQAAGMEFDNREAHSARYDTEKTAELFCGIVNR 194 (202)
T ss_dssp HHHHHHHTTCCCCTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 56689999998655 33 3444557899999988
No 9
>d2jm6b1 f.1.4.1 (B:147-308) EAT/MCL-1 (Myeloid cell leukemia sequence 1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=17.21 E-value=2e+02 Score=21.56 Aligned_cols=97 Identities=10% Similarity=0.141 Sum_probs=56.9
Q ss_pred HHHHHHHHHhhcCcCCCCCCChHHHHHHHHHHHHhhhhccccCCCCCccccCCchhhhhhhhhhhhhhHHHHHHHhhhhh
Q 023129 142 YRNVLLAVRKNLNIPCSSKLSTEDLEAEIFLHLLQEYASEESGVFPGSWENSEASDAQNSLELGLSQWKVQALAAFNAGA 221 (287)
Q Consensus 142 YReILldVC~kLKV~ys~~lsT~dIEaeifL~lL~~~ss~~~g~~~~aWeKm~~~e~q~sl~~~L~~~~~~lla~lk~G~ 221 (287)
|++.+.++|++|.+.- +-+.+.|..+.++ .++ .|..+| .++++++--|+
T Consensus 59 ~~~~f~~~~~~l~i~~-------~~~~~~f~~Va~e-----------lf~------------dG~~NW-GRIval~~F~~ 107 (162)
T d2jm6b1 59 HETAFQGMLRKLDIKN-------EGDVKSFSRVMVH-----------VFK------------DGVTNW-GRIVTLISFGA 107 (162)
T ss_dssp HHHHHHHHHHHSCCSS-------TTHHHHHHHHHHH-----------HTT------------TCCCCH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCC-------ccHHHHHHHHHHH-----------HHc------------CCCCch-HHHHHHHHHHH
Confidence 7777888999987642 1234677777777 221 233467 66677777777
Q ss_pred HHHHHHHHH----HHHHHHHHHHHHHhhhHHHHHHHhhhccccceeecCCCch
Q 023129 222 VELKSMMLK----LMRNLSGKFFLEAANYQIKKEVLKKVVDNWLPLIWSPEQP 270 (287)
Q Consensus 222 a~~vssvlk----L~k~la~q~al~~A~YQvake~l~~Gg~~~~~~~~~~~~~ 270 (287)
..++-.+-+ ++++|+.-++- +-.-.++.=...+||-....-...++.|
T Consensus 108 ~la~~~~~~~~~~~v~~i~~~~~~-fl~~~l~~WI~~~GGW~gf~~~f~~~d~ 159 (162)
T d2jm6b1 108 FVAKHLKSVNQESFIEPLAETITD-VLVRTKRDWLVKQRGWDGFVEFFHVQDL 159 (162)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH-HHHHHSHHHHHHTTTHHHHHHHHSSCCS
T ss_pred HHHHHHHHcCChhHHHHHHHHHHH-HHHHhHHHHHHHCCCHHHHHHHhCCCCC
Confidence 777665443 44554443322 2222445556788887666555555544
No 10
>d1wxma1 d.15.1.5 (A:8-80) A-Raf proto-oncogene serine/threonine-protein kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.06 E-value=27 Score=24.49 Aligned_cols=31 Identities=13% Similarity=-0.032 Sum_probs=25.5
Q ss_pred cchhhhhcCC-CchHHHHHHHHHhhcCcCCCC
Q 023129 129 ADARSTLRGW-RPSYRNVLLAVRKNLNIPCSS 159 (287)
Q Consensus 129 aD~~tvLRG~-gvsYReILldVC~kLKV~ys~ 159 (287)
+...|++.=+ |.+-|++|...|+|-+++|+.
T Consensus 9 ngq~T~V~vrpG~tir~~L~k~l~kRgl~~~~ 40 (73)
T d1wxma1 9 NKQRTVVTVRDGMSVYDSLDKALKVRGLNQDC 40 (73)
T ss_dssp SSCEEEEECCSSCBSHHHHHHHHHTTTCCSSS
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHcCCCHHH
Confidence 3346777765 999999999999999999764
Done!