Query 023130
Match_columns 287
No_of_seqs 274 out of 1570
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 16:52:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023130.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023130hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1rkd_A Ribokinase; carbohydrat 100.0 1.1E-34 3.7E-39 257.6 20.9 214 65-282 2-215 (309)
2 2fv7_A Ribokinase; structural 100.0 9.7E-35 3.3E-39 260.4 20.7 215 65-282 22-236 (331)
3 3ry7_A Ribokinase; transferase 100.0 1.8E-34 6.3E-39 255.4 22.0 212 67-282 2-214 (304)
4 2rbc_A Sugar kinase, AGR_C_456 100.0 9E-33 3.1E-37 248.9 18.6 212 66-286 28-241 (343)
5 3kzh_A Probable sugar kinase; 100.0 4.6E-32 1.6E-36 242.7 18.5 213 64-282 3-217 (328)
6 1vm7_A Ribokinase; TM0960, str 100.0 4.3E-32 1.5E-36 241.2 17.9 202 68-281 15-217 (311)
7 3go6_A Ribokinase RBSK; phosph 100.0 7.4E-32 2.5E-36 239.6 18.7 192 64-264 16-209 (310)
8 3ikh_A Carbohydrate kinase; tr 100.0 2.1E-32 7.1E-37 241.9 15.1 192 67-263 2-193 (299)
9 2hlz_A Ketohexokinase; non-pro 100.0 5.6E-31 1.9E-35 234.1 20.9 205 66-280 16-229 (312)
10 3vas_A Putative adenosine kina 100.0 8.3E-33 2.8E-37 251.5 9.2 213 66-281 23-267 (370)
11 2nwh_A AGR_C_3442P, carbohydra 100.0 1.7E-31 5.8E-36 237.9 15.3 193 67-264 3-199 (317)
12 2c4e_A Sugar kinase MJ0406; tr 100.0 3.5E-32 1.2E-36 240.7 10.6 189 67-265 5-197 (302)
13 4e3a_A Sugar kinase protein; s 100.0 2.5E-31 8.5E-36 240.3 15.7 206 66-278 24-259 (352)
14 3ljs_A Fructokinase; fructokia 100.0 1.6E-31 5.5E-36 240.1 13.3 191 65-265 2-208 (338)
15 3loo_A Anopheles gambiae adeno 100.0 7.9E-32 2.7E-36 244.7 7.3 213 65-281 21-265 (365)
16 3iq0_A Putative ribokinase II; 100.0 3.3E-30 1.1E-34 230.8 15.9 212 66-287 2-228 (330)
17 3otx_A Adenosine kinase, putat 100.0 2E-31 7E-36 240.2 8.1 208 66-277 6-250 (347)
18 3hj6_A Fructokinase, FRK; fruc 100.0 6.3E-31 2.2E-35 235.2 9.8 191 64-264 18-222 (327)
19 3ktn_A Carbohydrate kinase, PF 100.0 1.7E-29 5.8E-34 227.5 19.1 206 67-282 2-232 (346)
20 4du5_A PFKB; structural genomi 100.0 5.5E-30 1.9E-34 230.0 15.6 213 62-286 21-251 (336)
21 3lhx_A Ketodeoxygluconokinase; 100.0 6.4E-30 2.2E-34 227.9 14.7 203 68-287 5-230 (319)
22 4e69_A 2-dehydro-3-deoxyglucon 100.0 1E-29 3.5E-34 227.5 15.6 204 66-287 22-246 (328)
23 1bx4_A Protein (adenosine kina 100.0 1.1E-30 3.8E-35 235.2 8.5 212 66-281 5-250 (345)
24 2pkf_A Adenosine kinase; trans 100.0 8.1E-30 2.8E-34 228.7 13.4 198 68-271 11-222 (334)
25 3pl2_A Sugar kinase, ribokinas 100.0 3E-29 1E-33 223.4 16.2 211 64-286 5-232 (319)
26 3umo_A 6-phosphofructokinase i 100.0 8.1E-29 2.8E-33 219.6 18.9 204 67-282 1-215 (309)
27 3uq6_A Adenosine kinase, putat 100.0 3.1E-30 1.1E-34 234.7 9.7 214 65-281 24-269 (372)
28 1v1a_A 2-keto-3-deoxygluconate 100.0 1.2E-28 4.2E-33 218.6 19.4 186 68-264 2-203 (309)
29 3h49_A Ribokinase; transferase 100.0 5.8E-29 2E-33 222.3 16.5 206 66-286 4-228 (325)
30 3b1n_A Ribokinase, putative; r 100.0 1.5E-29 5.2E-34 226.2 12.7 194 69-272 2-210 (326)
31 2ajr_A Sugar kinase, PFKB fami 100.0 2.2E-29 7.6E-34 225.6 13.7 206 66-282 11-233 (331)
32 4gm6_A PFKB family carbohydrat 100.0 8E-29 2.7E-33 223.5 15.6 204 65-279 22-242 (351)
33 2abs_A Adenosine kinase, AK; r 100.0 9.9E-29 3.4E-33 225.6 15.6 210 65-281 30-282 (383)
34 3cqd_A 6-phosphofructokinase i 100.0 2E-28 6.8E-33 217.1 16.7 204 68-282 2-215 (309)
35 2qcv_A Putative 5-dehydro-2-de 100.0 2.1E-28 7.2E-33 219.1 17.0 207 65-281 9-231 (332)
36 2f02_A Tagatose-6-phosphate ki 100.0 2.3E-28 7.9E-33 218.2 17.1 203 68-282 3-217 (323)
37 2jg1_A Tagatose-6-phosphate ki 100.0 3.2E-28 1.1E-32 218.0 17.3 203 68-282 21-234 (330)
38 2v78_A Fructokinase; transfera 100.0 1.9E-28 6.6E-33 217.7 14.3 203 68-286 2-225 (313)
39 4e84_A D-beta-D-heptose 7-phos 100.0 3.3E-28 1.1E-32 219.8 15.8 208 64-281 50-264 (352)
40 3ie7_A LIN2199 protein; phosph 100.0 1.1E-28 3.7E-33 220.0 12.4 199 69-278 4-214 (320)
41 1tyy_A Putative sugar kinase; 100.0 5E-29 1.7E-33 224.0 10.1 182 65-264 22-219 (339)
42 2dcn_A Hypothetical fructokina 100.0 1.6E-28 5.4E-33 218.0 13.1 191 68-274 2-212 (311)
43 3bf5_A Ribokinase related prot 100.0 2E-28 6.7E-33 217.2 11.9 180 66-264 19-202 (306)
44 2abq_A Fructose 1-phosphate ki 100.0 2.7E-27 9.3E-32 209.6 17.7 199 70-282 3-209 (306)
45 2jg5_A Fructose 1-phosphate ki 99.9 4.5E-27 1.5E-31 208.0 17.7 198 70-281 3-208 (306)
46 3ewm_A Uncharacterized sugar k 99.9 2.1E-27 7.1E-32 211.1 14.5 186 67-264 1-202 (313)
47 2afb_A 2-keto-3-deoxygluconate 99.9 5.1E-26 1.7E-30 205.2 20.1 204 66-281 11-242 (351)
48 2qhp_A Fructokinase; NP_810670 99.9 6.1E-27 2.1E-31 206.2 12.9 191 68-281 4-205 (296)
49 3kd6_A Carbohydrate kinase, PF 99.9 2.4E-24 8.3E-29 191.3 13.3 196 68-286 3-205 (313)
50 1vk4_A PFKB carbohydrate kinas 99.9 1.5E-24 5.3E-29 191.3 5.7 186 86-286 18-215 (298)
51 2yxt_A Pyridoxal kinase; beta 99.2 6.6E-12 2.3E-16 110.9 4.2 140 120-282 12-178 (312)
52 2ddm_A Pyridoxine kinase; pyri 98.8 1.2E-09 4E-14 95.1 3.7 146 117-282 19-187 (283)
53 1jxh_A Phosphomethylpyrimidine 98.8 2.5E-09 8.7E-14 93.3 4.2 82 201-282 95-190 (288)
54 1ub0_A THID, phosphomethylpyri 98.7 1.2E-08 3.9E-13 87.4 4.9 82 201-282 71-165 (258)
55 2i5b_A Phosphomethylpyrimidine 98.5 6.9E-07 2.4E-11 76.8 9.9 83 200-282 74-170 (271)
56 1ekq_A Hydroxyethylthiazole ki 98.2 6.5E-06 2.2E-10 71.0 9.3 89 194-282 52-160 (272)
57 3pzs_A PM kinase, pyridoxamine 97.9 1.2E-05 4E-10 69.9 6.2 83 199-282 76-176 (289)
58 3zs7_A Pyridoxal kinase; trans 97.9 3E-05 1E-09 67.8 7.9 83 199-282 75-177 (300)
59 3h74_A Pyridoxal kinase; PSI-I 97.8 3E-05 1E-09 67.2 6.8 81 200-281 74-168 (282)
60 3mbh_A Putative phosphomethylp 97.8 2.7E-05 9.4E-10 67.7 6.4 82 200-282 77-177 (291)
61 3drw_A ADP-specific phosphofru 97.4 0.00019 6.5E-09 66.0 6.4 177 100-283 113-349 (474)
62 1v8a_A Hydroxyethylthiazole ki 97.2 0.0003 1E-08 60.3 5.0 90 193-282 49-157 (265)
63 3rm5_A Hydroxymethylpyrimidine 97.1 0.00074 2.5E-08 63.9 7.1 82 200-282 91-189 (550)
64 3dzv_A 4-methyl-5-(beta-hydrox 96.8 0.0069 2.3E-07 51.9 9.7 92 192-283 50-165 (273)
65 1ua4_A Glucokinase, ADP-depend 96.7 0.015 5.1E-07 53.3 12.0 173 102-284 109-335 (455)
66 3rpz_A ADP/ATP-dependent NAD(P 96.6 0.0023 7.7E-08 55.1 5.1 84 198-282 96-181 (279)
67 3nl6_A Thiamine biosynthetic b 96.6 0.0081 2.8E-07 56.5 9.2 91 192-282 297-408 (540)
68 3hpd_A Hydroxyethylthiazole ki 96.2 0.0064 2.2E-07 51.8 5.7 91 193-283 49-158 (265)
69 3bgk_A SMU.573, putative uncha 96.1 0.00091 3.1E-08 58.6 -0.0 84 196-281 121-215 (311)
70 2r3b_A YJEF-related protein; p 96.0 0.0022 7.7E-08 56.0 1.9 83 196-280 107-200 (310)
71 1gc5_A ADP-dependent glucokina 95.9 0.025 8.4E-07 52.0 8.5 171 102-283 117-344 (467)
72 1l2l_A ADP-dependent glucokina 95.9 0.0054 1.8E-07 56.2 4.1 171 102-283 112-337 (457)
73 3rss_A Putative uncharacterize 95.3 0.012 4E-07 54.9 3.9 87 194-282 314-406 (502)
74 3k5w_A Carbohydrate kinase; 11 76.8 0.43 1.5E-05 44.0 -0.4 78 199-282 291-377 (475)
75 3can_A Pyruvate-formate lyase- 70.3 20 0.00068 27.6 8.0 76 203-281 6-90 (182)
76 2fcj_A Small toprim domain pro 65.6 1.4 4.7E-05 32.4 0.2 79 200-282 26-107 (119)
77 3c8f_A Pyruvate formate-lyase 52.8 24 0.00081 28.2 5.7 77 202-281 71-158 (245)
78 1y8q_A Ubiquitin-like 1 activa 47.7 1.2E+02 0.0042 26.1 9.8 94 102-231 43-155 (346)
79 2guz_B Mitochondrial import in 42.3 27 0.00094 22.4 3.5 30 253-282 1-34 (65)
80 3pwk_A Aspartate-semialdehyde 40.3 1.4E+02 0.0049 26.1 9.0 91 124-236 5-97 (366)
81 3tz6_A Aspartate-semialdehyde 39.7 67 0.0023 27.9 6.7 91 124-236 4-96 (344)
82 2re2_A Uncharacterized protein 39.4 11 0.00038 28.0 1.4 38 104-147 65-102 (136)
83 2gk4_A Conserved hypothetical 38.0 25 0.00086 28.8 3.5 28 100-127 25-52 (232)
84 3ctl_A D-allulose-6-phosphate 35.2 32 0.0011 28.1 3.7 52 200-252 80-133 (231)
85 4g6x_A Glyoxalase/bleomycin re 33.5 79 0.0027 23.1 5.5 41 133-177 109-149 (155)
86 3v7e_A Ribosome-associated pro 33.5 67 0.0023 21.3 4.6 35 200-234 27-61 (82)
87 3inp_A D-ribulose-phosphate 3- 33.4 36 0.0012 28.1 3.8 52 200-252 109-161 (246)
88 1tqx_A D-ribulose-5-phosphate 33.4 34 0.0012 27.8 3.6 51 201-251 86-142 (227)
89 3r6a_A Uncharacterized protein 33.1 71 0.0024 23.3 5.2 44 133-180 76-119 (144)
90 3inp_A D-ribulose-phosphate 3- 31.8 2.1E+02 0.0072 23.4 8.4 155 108-281 74-244 (246)
91 3ijl_A Muconate cycloisomerase 31.5 87 0.003 26.9 6.1 62 194-255 193-254 (338)
92 3tum_A Shikimate dehydrogenase 29.0 1.7E+02 0.0059 24.2 7.3 41 101-143 131-172 (269)
93 3kol_A Oxidoreductase, glyoxal 28.8 1.3E+02 0.0044 21.4 6.0 42 133-178 109-150 (156)
94 2j9r_A Thymidine kinase; TK1, 28.6 1.3E+02 0.0043 24.2 6.2 52 200-252 101-159 (214)
95 3rhe_A NAD-dependent benzaldeh 28.5 1E+02 0.0036 22.4 5.4 46 131-180 79-124 (148)
96 1t4b_A Aspartate-semialdehyde 28.0 2.7E+02 0.0091 24.2 8.7 37 198-236 63-100 (367)
97 3e2i_A Thymidine kinase; Zn-bi 27.9 1.4E+02 0.0049 24.0 6.4 52 199-251 100-158 (219)
98 3sk2_A EHPR; antibiotic resist 27.9 1.2E+02 0.004 21.3 5.5 43 132-178 85-130 (132)
99 4a5l_A Thioredoxin reductase; 27.8 49 0.0017 27.4 3.8 20 106-125 15-34 (314)
100 3r4q_A Lactoylglutathione lyas 27.6 1.4E+02 0.0048 21.8 6.1 49 127-179 84-132 (160)
101 3ovp_A Ribulose-phosphate 3-ep 27.3 53 0.0018 26.6 3.7 53 199-252 86-139 (228)
102 1y81_A Conserved hypothetical 27.2 1.8E+02 0.0062 21.1 9.6 82 123-234 16-102 (138)
103 3cpq_A 50S ribosomal protein L 26.9 1E+02 0.0036 21.6 4.9 32 200-231 37-68 (110)
104 3j21_Z 50S ribosomal protein L 26.8 1.3E+02 0.0044 20.6 5.3 34 199-232 30-63 (99)
105 2dha_A FLJ20171 protein; RRM d 26.8 85 0.0029 22.5 4.5 44 102-145 6-49 (123)
106 3e5d_A Putative glyoxalase I; 26.6 1.3E+02 0.0045 20.4 5.5 40 133-176 85-125 (127)
107 4fk1_A Putative thioredoxin re 26.5 48 0.0016 27.6 3.5 21 106-126 17-37 (304)
108 2pv7_A T-protein [includes: ch 26.1 1.5E+02 0.005 24.7 6.5 24 124-147 24-48 (298)
109 2pjs_A AGR_C_3564P, uncharacte 25.9 1.5E+02 0.0053 19.9 6.4 41 133-177 75-116 (119)
110 2lkz_A RNA-binding protein 5; 25.4 84 0.0029 21.3 4.0 37 118-154 8-45 (95)
111 4gym_A Glyoxalase/bleomycin re 24.8 1.2E+02 0.0042 21.7 5.2 42 134-179 92-133 (149)
112 3r1i_A Short-chain type dehydr 24.8 93 0.0032 25.6 4.9 48 103-152 41-88 (276)
113 3vzx_A Heptaprenylglyceryl pho 24.6 2.1E+02 0.0072 23.2 6.8 38 199-236 30-69 (228)
114 2l82_A Designed protein OR32; 24.4 1.6E+02 0.0054 20.9 5.2 42 194-235 71-112 (162)
115 1iuk_A Hypothetical protein TT 24.2 2.1E+02 0.0072 20.8 7.2 17 130-146 26-42 (140)
116 3h7a_A Short chain dehydrogena 24.2 78 0.0027 25.6 4.3 48 103-152 16-63 (252)
117 1jzt_A Hypothetical 27.5 kDa p 24.1 83 0.0028 25.8 4.4 44 102-146 69-115 (246)
118 2q7v_A Thioredoxin reductase; 24.1 53 0.0018 27.4 3.3 23 104-126 17-39 (325)
119 2raf_A Putative dinucleotide-b 23.9 2.3E+02 0.0078 22.1 7.0 25 123-147 21-45 (209)
120 3v7q_A Probable ribosomal prot 23.8 1.5E+02 0.0052 20.4 5.2 33 200-232 35-67 (101)
121 1w41_A 50S ribosomal protein L 23.8 1.1E+02 0.0039 21.0 4.5 32 200-231 32-63 (101)
122 3f4w_A Putative hexulose 6 pho 23.6 66 0.0023 25.2 3.6 56 199-254 76-134 (211)
123 3g12_A Putative lactoylglutath 23.5 1.2E+02 0.0041 21.3 4.8 43 133-179 77-120 (128)
124 3on1_A BH2414 protein; structu 23.4 1.2E+02 0.0039 21.0 4.5 33 200-232 34-66 (101)
125 3iwt_A 178AA long hypothetical 23.1 49 0.0017 25.5 2.7 36 119-157 16-64 (178)
126 3g5s_A Methylenetetrahydrofola 23.1 83 0.0028 28.4 4.4 22 104-125 10-31 (443)
127 1pii_A N-(5'phosphoribosyl)ant 22.9 27 0.00091 31.8 1.2 60 197-257 127-187 (452)
128 3l7t_A SMU.1112C, putative unc 22.7 1.8E+02 0.0063 19.6 5.7 40 133-175 92-131 (134)
129 1f9z_A Glyoxalase I; beta-alph 22.6 1.8E+02 0.0062 19.9 5.7 52 124-179 75-126 (135)
130 3ghj_A Putative integron gene 22.6 1.6E+02 0.0055 20.9 5.5 41 133-176 98-138 (141)
131 2wfb_A Putative uncharacterize 22.5 39 0.0013 24.1 1.9 40 103-147 52-91 (120)
132 3dje_A Fructosyl amine: oxygen 22.5 96 0.0033 27.2 4.9 24 103-126 14-38 (438)
133 3meb_A Aspartate aminotransfer 22.4 2E+02 0.0067 25.3 6.9 26 210-235 219-244 (448)
134 1tqj_A Ribulose-phosphate 3-ep 22.2 1.1E+02 0.0038 24.6 4.8 52 199-251 84-138 (230)
135 3pvc_A TRNA 5-methylaminomethy 22.0 1E+02 0.0034 29.3 5.1 24 103-126 272-295 (689)
136 3fwy_A Light-independent proto 21.9 64 0.0022 27.5 3.4 20 107-126 65-84 (314)
137 3m2o_A Glyoxalase/bleomycin re 21.9 1.9E+02 0.0065 21.2 5.9 43 133-179 101-144 (164)
138 4imr_A 3-oxoacyl-(acyl-carrier 21.7 1.1E+02 0.0037 25.1 4.8 48 103-152 42-89 (275)
139 1i4n_A Indole-3-glycerol phosp 21.6 52 0.0018 27.2 2.7 60 197-257 120-181 (251)
140 3uf0_A Short-chain dehydrogena 21.5 1E+02 0.0034 25.3 4.5 46 103-151 40-85 (273)
141 3kbq_A Protein TA0487; structu 21.4 1.2E+02 0.004 23.5 4.5 35 106-142 24-58 (172)
142 2p25_A Glyoxalase family prote 21.2 1.9E+02 0.0066 19.3 6.2 38 134-175 85-123 (126)
143 4gqr_A Pancreatic alpha-amylas 21.2 62 0.0021 28.9 3.3 23 212-234 76-98 (496)
144 3lyl_A 3-oxoacyl-(acyl-carrier 20.9 88 0.003 24.9 3.9 48 103-152 14-61 (247)
145 2orv_A Thymidine kinase; TP4A 20.7 3.4E+02 0.012 22.0 10.4 55 196-252 86-147 (234)
146 2ywl_A Thioredoxin reductase r 20.6 75 0.0026 23.8 3.3 42 106-147 12-73 (180)
147 1u7z_A Coenzyme A biosynthesis 20.6 87 0.003 25.4 3.7 50 66-126 7-56 (226)
148 2d59_A Hypothetical protein PH 20.6 2.5E+02 0.0086 20.4 9.0 30 200-231 77-106 (144)
149 2kjz_A ATC0852; protein of unk 20.5 1.3E+02 0.0046 21.5 4.6 41 133-177 100-140 (144)
150 2r00_A Aspartate-semialdehyde 20.4 4E+02 0.014 22.6 9.4 89 124-236 6-98 (336)
151 3ucx_A Short chain dehydrogena 20.3 1.1E+02 0.0037 24.9 4.4 48 103-152 20-67 (264)
152 3ey7_A Biphenyl-2,3-DIOL 1,2-d 20.1 2.1E+02 0.0071 19.5 5.5 46 133-178 84-129 (133)
153 1xqa_A Glyoxalase/bleomycin re 20.1 1.8E+02 0.0062 19.3 5.1 38 133-176 74-111 (113)
No 1
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=100.00 E-value=1.1e-34 Score=257.55 Aligned_cols=214 Identities=30% Similarity=0.464 Sum_probs=186.9
Q ss_pred CCCCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCC
Q 023130 65 NTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCG 144 (287)
Q Consensus 65 ~~~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~g 144 (287)
+++++|+|+|++++|+++.++++|..++.+........+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.|
T Consensus 2 ~~~~~v~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~N~A~~la~lG~~~~~~~~vG~D~~g~~i~~~L~~~g 81 (309)
T 1rkd_A 2 QNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDN 81 (309)
T ss_dssp --CCEEEEECCCEEEEEEECSSCCCTTCCCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEEEESSTTHHHHHHHHHTTT
T ss_pred CCCCeEEEECcceEeEEEecCCCCCCCCeeecCceeecCCCHHHHHHHHHHhCCCceEEEEEECCCHHHHHHHHHHHHcC
Confidence 34568999999999999999999999998888889999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccccEEEEeCCCCHHHHHHHHHHHHh
Q 023130 145 VRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARS 224 (287)
Q Consensus 145 Vd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~~~~~~~~~~~a~~ 224 (287)
|+++++.+.+ +.+|+.++++++++|+|+++.+.+++..++++++. ...+.++.++++++++..+.+.+.++++.+++
T Consensus 82 v~~~~v~~~~--~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a~~ 158 (309)
T 1rkd_A 82 IDITPVSVIK--GESTGVALIFVNGEGENVIGIHAGANAALSPALVE-AQRERIANASALLMQLESPLESVMAAAKIAHQ 158 (309)
T ss_dssp EECTTEEEET--TCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHH-TTHHHHHHCSEEEECSSSCHHHHHHHHHHHHH
T ss_pred CCccceEecC--CCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHH-HHHHhcccCCEEEEeCCCCHHHHHHHHHHHHH
Confidence 9999999877 77999999999988999998888876555544442 22345788999999998888888999999999
Q ss_pred CCCcEEEeCCCCCCCCchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhhh
Q 023130 225 AGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKM 282 (287)
Q Consensus 225 ~g~~v~~D~~~~~~~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~ 282 (287)
+|+++++|++.. ..+...+++++|++++|++|++.|+|.+..+.+++.+++++|.++
T Consensus 159 ~g~~v~~D~~~~-~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~ 215 (309)
T 1rkd_A 159 NKTIVALNPAPA-RELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEK 215 (309)
T ss_dssp TTCEEEECCCSC-CCCCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHHT
T ss_pred cCCEEEEECCcc-ccchHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHHHHHHHHHHh
Confidence 999999999876 356678999999999999999999997666677777777777653
No 2
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=100.00 E-value=9.7e-35 Score=260.44 Aligned_cols=215 Identities=30% Similarity=0.419 Sum_probs=187.6
Q ss_pred CCCCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCC
Q 023130 65 NTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCG 144 (287)
Q Consensus 65 ~~~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~g 144 (287)
+++++|+|+|++++|+++.++++|.+++.+........+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.|
T Consensus 22 ~~~~~vlviG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~G 101 (331)
T 2fv7_A 22 EEVAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQND 101 (331)
T ss_dssp --CCSEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHTTT
T ss_pred cccCCEEEECcccEEEEEecCCCCCCCceEecCceEECcCCHHHHHHHHHHHCCCCeEEEEEECCChhHHHHHHHHHHcC
Confidence 34568999999999999999999999998888888999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccccEEEEeCCCCHHHHHHHHHHHHh
Q 023130 145 VRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARS 224 (287)
Q Consensus 145 Vd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~~~~~~~~~~~a~~ 224 (287)
|+++++.+.+ +.+|+.++++++++|+|+++.+++++..++++++. ...+.++.++++++++..+.+.+..+++.+++
T Consensus 102 v~~~~v~~~~--~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~~-~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~ 178 (331)
T 2fv7_A 102 ISTEFTYQTK--DAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLR-AAANVISRAKVMVCQLEITPATSLEALTMARR 178 (331)
T ss_dssp EECTTEEEES--SSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHH-HTHHHHHHCSEEEECSSSCHHHHHHHHHHHHH
T ss_pred CcceeeEecC--CCCCceEEEEECCCCCeEEEecCCccccCCHHHHH-HHHHhhccCCEEEEecCCCHHHHHHHHHHHHH
Confidence 9999999877 67999999999988999999988876555544442 12245788999999988888888999999999
Q ss_pred CCCcEEEeCCCCCCCCchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhhh
Q 023130 225 AGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKM 282 (287)
Q Consensus 225 ~g~~v~~D~~~~~~~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~ 282 (287)
.|+++++||+.....+..++++++|++++|++|++.|+|.+..+.+++.+++++|.++
T Consensus 179 ~g~~v~~Dp~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~ 236 (331)
T 2fv7_A 179 SGVKTLFNPAPAIADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKR 236 (331)
T ss_dssp TTCEEEECCCSCCTTCCTHHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHHTT
T ss_pred cCCEEEEeCCcccccchHHHHhcCCEEEeCHHHHHHHhCCCCCChhHHHHHHHHHHHc
Confidence 9999999999764566778999999999999999999997666777888888887664
No 3
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=1.8e-34 Score=255.39 Aligned_cols=212 Identities=28% Similarity=0.504 Sum_probs=190.0
Q ss_pred CCCEEEECCceeeeEeecCCCCCCCcEE-EecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCC
Q 023130 67 PPPLVVVGSANFDIYVEIDRLPKVGETV-AAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGV 145 (287)
Q Consensus 67 ~~~IlviG~~~iD~~~~vd~~P~~~~~~-~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gV 145 (287)
|++|+|+|++++|+++.++++|.+++++ +.......+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.||
T Consensus 2 m~~v~viG~~~~D~~~~~~~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~~~~vG~D~~g~~i~~~l~~~gv 81 (304)
T 3ry7_A 2 TNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKVAHI 81 (304)
T ss_dssp CCEEEEECCCEEEEEEECSSCCCTTCCCCCSSCCEEEEECHHHHHHHHHHHTTCEEEEECEEESSCTTHHHHHHHHHTTC
T ss_pred CCcEEEEccceeEEEEeccCCCCCCCceecccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCChHHHHHHHHHHHcCC
Confidence 5689999999999999999999999988 888899999999999999999999999999999999999999999999999
Q ss_pred CCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccccEEEEeCCCCHHHHHHHHHHHHhC
Q 023130 146 RLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSA 225 (287)
Q Consensus 146 d~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~~~~~~~~~~~a~~~ 225 (287)
+++++.+.+ +.+|+.++++++++|+++++.+.+++..++++++. ...+.++.++++++++..+.+.+.++++.++++
T Consensus 82 ~~~~v~~~~--~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a~~~ 158 (304)
T 3ry7_A 82 DTSYIIKTA--EAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVI-NAKDAIINADFVVAQLEVPIPAIISAFEIAKAH 158 (304)
T ss_dssp BCTTCEEES--SSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHH-TTHHHHHTCSEEEEETTSCHHHHHHHHHHHHHT
T ss_pred cchhEEEcC--CCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHH-HHHHHhccCCEEEEcCCCCHHHHHHHHHHHHHc
Confidence 999998877 77999999999999999999998877666555553 233568899999999988988899999999999
Q ss_pred CCcEEEeCCCCCCCCchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhhh
Q 023130 226 GVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKM 282 (287)
Q Consensus 226 g~~v~~D~~~~~~~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~ 282 (287)
|+++++|+++. .....++++++|++++|++|++.|+|.+..+.+++.+++++|.++
T Consensus 159 ~~~v~~D~~~~-~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~ 214 (304)
T 3ry7_A 159 GVTTVLNPAPA-KALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSI 214 (304)
T ss_dssp TCEEEEECCSC-CCCCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCcc-ccccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHHHHc
Confidence 99999999875 457788999999999999999999998777777888888877653
No 4
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=9e-33 Score=248.86 Aligned_cols=212 Identities=20% Similarity=0.252 Sum_probs=179.5
Q ss_pred CCCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCC
Q 023130 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGV 145 (287)
Q Consensus 66 ~~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gV 145 (287)
++++|+|+|++++|+++.++++|..++.+........+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.||
T Consensus 28 ~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~GV 107 (343)
T 2rbc_A 28 GGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDLSESGI 107 (343)
T ss_dssp CCCEEEEESCCEEEEEEECSSCCCSSSCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTE
T ss_pred cCCeEEEECcceEEEEeecCCCCCCCCeEeeeeeEEcCCcHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 34579999999999999999999988888888889999999999999999999999999999999999999999999999
Q ss_pred CCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccccEEEEeCCCCHHHHHHHHHHHHhC
Q 023130 146 RLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSA 225 (287)
Q Consensus 146 d~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~~~~~~~~~~~a~~~ 225 (287)
+++++.+.+ +.+|+.++++++++|+|+++.+++++..+.++++.. +.+..++++++++..+ +.+.++++.+++.
T Consensus 108 d~~~v~~~~--~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~~---~~l~~~~~v~~~~~~~-~~~~~~~~~a~~~ 181 (343)
T 2rbc_A 108 DTSGMTVAP--GARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTP---EDIALFDAVLVDVRWP-ELALDVLTVARAL 181 (343)
T ss_dssp ECTTCEEET--TCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCCH---HHHTTCSEEEECSSSH-HHHHHHHHHHHHT
T ss_pred ceeeEEEcC--CCCCceEEEEECCCCCEEEEEcCCCcccCChhHhcH---hhhCCCCEEEEcCCCH-HHHHHHHHHHHHC
Confidence 999998877 679999999999899999988888766555555542 4578899999998765 5688899999999
Q ss_pred CCcEEEeCCCCCCCCchh-hccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhh-hcccC
Q 023130 226 GVPVIFDAGGMDAPIPQE-LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHK-MVSVG 286 (287)
Q Consensus 226 g~~v~~D~~~~~~~~~~~-ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~-~v~v~ 286 (287)
|+++++|+... .+.+.+ +++++|++++|++|++.|+|. .+.+++.+.+.+... +.+|.
T Consensus 182 g~~v~~Dp~~~-~~~~~~~ll~~~dil~~N~~Ea~~l~g~--~~~~~~~~~l~~~g~~~~Vvv 241 (343)
T 2rbc_A 182 GKPAILDGDVA-PVETLEGLAPAATHIVFSEPAATRLTGL--ETVKDMLPVLHARYPQTFIAV 241 (343)
T ss_dssp TCCEEEEECSC-CHHHHHHHGGGCSEEEEEHHHHHHHHCC--SSHHHHHHHHHHHSTTSEEEE
T ss_pred CCEEEEECCcc-ccccHHHHHhcCCEEEeCHHHHHHHcCC--CCHHHHHHHHHHhCCCceEEE
Confidence 99999999764 344566 899999999999999999995 356655555554443 34443
No 5
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=100.00 E-value=4.6e-32 Score=242.71 Aligned_cols=213 Identities=19% Similarity=0.234 Sum_probs=178.3
Q ss_pred CCCCCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhC
Q 023130 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGC 143 (287)
Q Consensus 64 ~~~~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~ 143 (287)
.+++++|+|+|++++|+++.++.+|.++++... .....+||+++|+|+++++||.++.++|.+|+|.+|+.+++.|++.
T Consensus 3 ~~~~~~v~viG~~~vD~~~~~~~~~~~g~~~~~-~~~~~~GG~~~NvA~~la~LG~~v~~i~~vG~D~~g~~i~~~L~~~ 81 (328)
T 3kzh_A 3 LRKEPYLLVFGASVVDVFGFSKASYRPYNSTPG-HVKISFGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKI 81 (328)
T ss_dssp -CCCCCEEEECCCEEEEEEEESSCCCTTSEEEE-EEEEEEECHHHHHHHHHHHTTCCEEEECEECSSHHHHHHHHHHHHH
T ss_pred CCCCCcEEEECcEEeeeeeccCCCCCCCCCceE-EEEEccCcHHHHHHHHHHHcCCCcEEEEEecCcHHHHHHHHHHHHc
Confidence 356789999999999999999999999998877 7889999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEccCCCCCCceEEEEEcCCCCeeEEE-eCCCCCCCCCcccCchhHhhhccccEEEEeCCCCHHHHHHHHHHH
Q 023130 144 GVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIII-VGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAA 222 (287)
Q Consensus 144 gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~-~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~~~~~~~~~~~a 222 (287)
||+++++.+.+ +.+|+.++++++++|+|++.+ ..++...+.++.+. ...+.+..++++++++..+ +.+..+++ +
T Consensus 82 gv~~~~v~~~~--~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~l~~-a 156 (328)
T 3kzh_A 82 GYHMDDSMVIE--GGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFID-SKREIFENAEYTVLDSDNP-EIMEYLLK-N 156 (328)
T ss_dssp TEECTTCEECT--TCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHH-HTHHHHHTCSEEEEESSCH-HHHHHHHH-H
T ss_pred CCCccceEEeC--CCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHH-HHHHhhccCCEEEEeCCcH-HHHHHHHH-H
Confidence 99999998887 779999999999999998754 34443333333231 2345688999999999877 66777777 8
Q ss_pred HhCCCcEEEeCCCCC-CCCchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhhh
Q 023130 223 RSAGVPVIFDAGGMD-APIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKM 282 (287)
Q Consensus 223 ~~~g~~v~~D~~~~~-~~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~ 282 (287)
++.|+++++|+++.. ...+.++++++|++++|++|++.|+|.+..+.+++.+++++|.++
T Consensus 157 ~~~~~~v~~D~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~ 217 (328)
T 3kzh_A 157 FKDKTNFILDPVSAEKASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYFLGL 217 (328)
T ss_dssp HTTTSEEEEECCSHHHHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHH
T ss_pred hhcCCcEEEEeCCHHHHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHHHHHHHHHHh
Confidence 899999999998642 123567889999999999999999998777777777777777653
No 6
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=4.3e-32 Score=241.23 Aligned_cols=202 Identities=32% Similarity=0.470 Sum_probs=170.2
Q ss_pred CCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCC-cEEEEeecCCchHHHHHHHHHhCCCC
Q 023130 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHP-TYFVGQVGEDANGKLITDALSGCGVR 146 (287)
Q Consensus 68 ~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~-~~lig~vG~D~~G~~i~~~L~~~gVd 146 (287)
.+|+|+|++++|+++.++++|..++.++.......+||+++|+|+++++||.+ +.++|.+|+|.+|+++++.|++.||
T Consensus 15 ~~v~vvG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~i~~vG~D~~G~~l~~~L~~~gV- 93 (311)
T 1vm7_A 15 LVISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEKLGI- 93 (311)
T ss_dssp CCEEEECCCEEEEEEECSSCCCTTCEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEEECSSHHHHHHHHHHHHTTE-
T ss_pred CCEEEECcceeeEEEecccCCCCCceEecCeeeecCCCHHHHHHHHHHHcCCCceEEEEEECCChHHHHHHHHHHHCCC-
Confidence 58999999999999999999999999999899999999999999999999999 9999999999999999999999999
Q ss_pred CCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccccEEEEeCCCCHHHHHHHHHHHHhCC
Q 023130 147 LDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAG 226 (287)
Q Consensus 147 ~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~~~~~~~~~~~a~~~g 226 (287)
++.+.+ +.+|+.++++++++|+|+++.+++++..++++++. .+.++.++++++++..+.+.+.++ +++.|
T Consensus 94 --~v~~~~--~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~---a~~~~ 163 (311)
T 1vm7_A 94 --TGYIRV--SLPTGRAFIEVDKTGQNRIIIFPGANAELKKELID---WNTLSESDILLLQNEIPFETTLEC---AKRFN 163 (311)
T ss_dssp --EEEEEC--SSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCC---HHHHTTCSEEEECSSSCHHHHHHH---HHHCC
T ss_pred --EEEEcC--CCCCeEEEEEECCCCCEEEEEecCccccCCHHHhC---hhhcccCCEEEEeCCCCHHHHHHH---HHHcC
Confidence 677766 66999999999988999999988876666665554 356788999999988886655443 78889
Q ss_pred CcEEEeCCCCCCCCchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhh
Q 023130 227 VPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHK 281 (287)
Q Consensus 227 ~~v~~D~~~~~~~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~ 281 (287)
+++++||+.. ..+..++++++|++++|++|++.|+|.+..+.+++.+++++|.+
T Consensus 164 ~~v~~Dp~~~-~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~ 217 (311)
T 1vm7_A 164 GIVIFDPAPA-QGINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLE 217 (311)
T ss_dssp SEEEECCCSC-TTCCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHH
T ss_pred CEEEEeCcch-hhhhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHHHHHHHHH
Confidence 9999999874 45677899999999999999999998522222234444444444
No 7
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=99.98 E-value=7.4e-32 Score=239.64 Aligned_cols=192 Identities=30% Similarity=0.441 Sum_probs=169.5
Q ss_pred CCCCCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhC
Q 023130 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGC 143 (287)
Q Consensus 64 ~~~~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~ 143 (287)
.++|++|+|+|++++|+++.++++|.+++.+........+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.
T Consensus 16 ~~mm~~i~viG~~~iD~~~~v~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~L~~~ 95 (310)
T 3go6_A 16 GPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRAN 95 (310)
T ss_dssp ---CCEEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECSSHHHHHHHHHHHHT
T ss_pred ccccCCEEEECCceEEEEEecCCCCCCCCeEEecceeecCCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHc
Confidence 34567899999999999999999999999988889999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccccEEEEeCCCCHHHHHHHHHHHH
Q 023130 144 GVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAAR 223 (287)
Q Consensus 144 gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~~~~~~~~~~~a~ 223 (287)
||+++++...+ .+|+.++++++++|+|+++.+++++..+. ++ .+.++.++++++++..+.+.+.++++.++
T Consensus 96 gV~~~~v~~~~---~~T~~~~~~~~~~g~~~~~~~~ga~~~l~--~~----~~~l~~~~~v~~~~~~~~~~~~~~~~~a~ 166 (310)
T 3go6_A 96 AVGLDRTVTVP---GPSGTAIIVVDASAENTVLVAPGANAHLT--PV----PSAVANCDVLLTQLEIPVATALAAARAAQ 166 (310)
T ss_dssp TCBCTTCEECS---SCCEEEEEEECTTSCEEEEEECGGGGGCC--CC----TTTTTTCSEEEECSSSCHHHHHHHHHHHH
T ss_pred CCccceeEecC---CCCCEEEEEEcCCCCEEEEecCChhhhHH--HH----HHHhhcCCEEEECCCCCHHHHHHHHHHHH
Confidence 99999997654 49999999999999999999988765544 23 35688999999999888888999999999
Q ss_pred hCCCcEEEeCCCCCC--CCchhhccCCcEEecCHHHHHhhcCC
Q 023130 224 SAGVPVIFDAGGMDA--PIPQELLNFIDILSPNESELGRLTGM 264 (287)
Q Consensus 224 ~~g~~v~~D~~~~~~--~~~~~ll~~~dil~~Ne~E~~~l~g~ 264 (287)
++|+++++|+++... +.+..+++++|++++|++|++.|+|.
T Consensus 167 ~~g~~v~~D~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~ 209 (310)
T 3go6_A 167 SADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSP 209 (310)
T ss_dssp HTTCEEEEECCSSSCCHHHHHHHHHHCSEEEEEHHHHHHSSSC
T ss_pred HcCCEEEEcCCccccchHHHHHHHhhCCEEEeCHHHHHHHhCC
Confidence 999999999986532 12337899999999999999999883
No 8
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=99.98 E-value=2.1e-32 Score=241.94 Aligned_cols=192 Identities=23% Similarity=0.267 Sum_probs=172.5
Q ss_pred CCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCC
Q 023130 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVR 146 (287)
Q Consensus 67 ~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd 146 (287)
.++|+|+|++++|+++.++++|.+++.+........+||+++|+|+++++||.++.++|.+|+|.+|+.+++.|++.||+
T Consensus 2 ~~~i~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~i~~vG~D~~g~~i~~~l~~~gv~ 81 (299)
T 3ikh_A 2 SLRVYVTGNITVDETWSIPDIPKKGASIHGVKVSQDIGGKGANQAIILSRCGIETRLIAATGNDSNGAWIRQQIKNEPLM 81 (299)
T ss_dssp CCCEEEECCCEEEEEEECSSCCCTTCEEECEEEEEEEECHHHHHHHHHHHTTCCEEEECCCCSSHHHHHHHHHGGGSSCE
T ss_pred CceEEEECceEEEEEEecCCCCCCCCeEEeeeeeeccCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHcCCc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccccEEEEeCCCCHHHHHHHHHHHHhCC
Q 023130 147 LDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAG 226 (287)
Q Consensus 147 ~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~~~~~~~~~~~a~~~g 226 (287)
++++. .+ +.+|+.++++++++|+|+++.+++++..++++++. ...+.++.++++++++..+.+.+.++++.++++|
T Consensus 82 ~~~v~-~~--~~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~-~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a~~~g 157 (299)
T 3ikh_A 82 LLPDG-HF--NQHSDTSIILNSADGDNAIITTTAAADTFSLDEMI-PHMADAVAGDILLQQGNFSLDKTRALFQYARSRG 157 (299)
T ss_dssp EESSS-CC--SSCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHG-GGGTTCCTTCEEEECSCSCHHHHHHHHHHHHHTT
T ss_pred eeeeE-ec--CCCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHH-HHHhhhccCCEEEECCCCCHHHHHHHHHHHHHcC
Confidence 99984 45 56999999999999999998888776555555553 2335678999999999999888999999999999
Q ss_pred CcEEEeCCCCCCCCchhhccCCcEEecCHHHHHhhcC
Q 023130 227 VPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTG 263 (287)
Q Consensus 227 ~~v~~D~~~~~~~~~~~ll~~~dil~~Ne~E~~~l~g 263 (287)
+++++|+++. .....++++++|++++|++|++.|+|
T Consensus 158 ~~v~~D~~~~-~~~~~~ll~~~dil~~N~~E~~~l~g 193 (299)
T 3ikh_A 158 MTTVFNPSPV-NPDFCHLWPLIDIAVVNESEAELLQP 193 (299)
T ss_dssp CEEEECCCSC-CGGGGGCGGGCSEEEEEHHHHHHHCC
T ss_pred CEEEEccccc-hhhHHHHHhhCCEEEecHHHHHHHhc
Confidence 9999999876 35678899999999999999999987
No 9
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=99.97 E-value=5.6e-31 Score=234.11 Aligned_cols=205 Identities=15% Similarity=0.211 Sum_probs=170.1
Q ss_pred CCCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCC
Q 023130 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGV 145 (287)
Q Consensus 66 ~~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gV 145 (287)
++++|+|+|++++|+++.++++|..++.++.......+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.||
T Consensus 16 ~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~ig~vG~D~~G~~l~~~L~~~GV 95 (312)
T 2hlz_A 16 RGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFMGSMAPGHVADFVLDDLRRYSV 95 (312)
T ss_dssp -CCEEEEESCCEEEEEEEESSCCCTTCEEECSEEEEEEESHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHTTC
T ss_pred CCCcEEEECcceEEEeeccccCCCccceeecccceeccCccHHHHHHHHHHcCCceEEEEEecCchHHHHHHHHHHHcCC
Confidence 34579999999999999999999999988888888999999999999999999999999999999999999999999999
Q ss_pred CCCceEEccCCCCCCceEEEEEc-CCCCeeEEEeCCCCCCCCCcccCchhHhhhccccEEEEeCCCCHHHHHHHHHHHHh
Q 023130 146 RLDYMNVVKDGGVPTGHAVVMLQ-SDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARS 224 (287)
Q Consensus 146 d~~~v~~~~~~~~~T~~~~v~i~-~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~~~~~~~~~~~a~~ 224 (287)
+++++.+.+ +.+|+.++++++ ++|+|+++.++++...++++++.. ..+..++++++++.. .+...++++.+++
T Consensus 96 ~~~~v~~~~--~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~---~~l~~~~~v~~~~~~-~~~~~~~~~~a~~ 169 (312)
T 2hlz_A 96 DLRYTVFQT--TGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEK---VDLTQFKWIHIEGRN-ASEQVKMLQRIDA 169 (312)
T ss_dssp BCTTEEECS--SCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHT---SCGGGEEEEEEECSS-HHHHHHHHHHHHH
T ss_pred CCccceecc--CCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhH---hhhccCCEEEEeccC-HHHHHHHHHHHHH
Confidence 999998876 558999988886 479999998887665554444422 246789999999874 4556778888877
Q ss_pred C--------CCcEEEeCCCCCCCCchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHh
Q 023130 225 A--------GVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCH 280 (287)
Q Consensus 225 ~--------g~~v~~D~~~~~~~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~ 280 (287)
+ ++++++|+... .+.+.++++++|++++|++|++.| |. .+.+++.+.+.++.
T Consensus 170 ~~~~~~~~~~~~v~~d~~~~-~~~~~~~l~~~dil~~n~~ea~~l-g~--~~~~~~~~~l~~~~ 229 (312)
T 2hlz_A 170 HNTRQPPEQKIRVSVEVEKP-REELFQLFGYGDVVFVSKDVAKHL-GF--QSAEEALRGLYGRV 229 (312)
T ss_dssp HHTTSCGGGCCEEEEEECSC-CGGGGGGGGSSSEEEECHHHHHHT-TC--CSHHHHHHHHGGGS
T ss_pred hcccccCCCCeEEEEEcccc-hHHHHHHHhcCCEEEEcHHHHHHc-CC--CCHHHHHHHHHHhc
Confidence 6 78899999754 456788999999999999999987 63 45666655554443
No 10
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=99.97 E-value=8.3e-33 Score=251.55 Aligned_cols=213 Identities=17% Similarity=0.181 Sum_probs=179.5
Q ss_pred CCCCEEEECCceeeeEeecCC--------------------CCCCCcEEEecCceeecCchHHHHHHHHHHc---CCCcE
Q 023130 66 TPPPLVVVGSANFDIYVEIDR--------------------LPKVGETVAAKTSQTLAGGKGANQAACGAKL---SHPTY 122 (287)
Q Consensus 66 ~~~~IlviG~~~iD~~~~vd~--------------------~P~~~~~~~~~~~~~~~GG~a~N~A~~la~L---G~~~~ 122 (287)
++.+|+|+|++++|+++.++. +|..++++........+||+++|+|+++++| |.++.
T Consensus 23 ~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~~~ 102 (370)
T 3vas_A 23 SEGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCS 102 (370)
T ss_dssp CTTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTCEE
T ss_pred CCccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCcEE
Confidence 457899999999999999994 6666666666788999999999999999999 99999
Q ss_pred EEEeecCCchHHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCc-hhHhhhccc
Q 023130 123 FVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGD-EDLEVVKKA 201 (287)
Q Consensus 123 lig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~-~~~~~l~~a 201 (287)
++|.||+|.+|+++++.|++.||+++++.+.+ +.+|+.++++++ +|+|+++.+.|++..++++++.. ...+.+..+
T Consensus 103 ~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~--~~~Tg~~~i~v~-~g~rt~~~~~ga~~~l~~~~~~~~~~~~~~~~~ 179 (370)
T 3vas_A 103 YVGCIGADIQGKYIKNDCSALDLVTEFQIAEE--PLMTGKVAVLVS-EKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKA 179 (370)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEECCEECCT--TCCEEEEEEEEC-SSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHC
T ss_pred EEEEEcCChhHHHHHHHHHHcCCcccccccCC--CCCceEEEEEEe-CCceeEEEccchhhhCCHHHcCchhhHHHHhhC
Confidence 99999999999999999999999999998755 669999999998 89999999988887777666654 234668899
Q ss_pred cEEEEeCCC---CHHHHHHHHHHHHhCCCcEEEeCCCCC-----CCCchhhccCCcEEecCHHHHHhhcCCCCCCHHHHH
Q 023130 202 GIVLLQREI---PDSVNIQVAKAARSAGVPVIFDAGGMD-----APIPQELLNFIDILSPNESELGRLTGMPTDSYEQIS 273 (287)
Q Consensus 202 ~~v~~~g~~---~~~~~~~~~~~a~~~g~~v~~D~~~~~-----~~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~ 273 (287)
+++|++|.. +.+.+.++++.|+++|+++++|++... .+.+.++++++|++++|++|++.|+|....+.+++.
T Consensus 180 ~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~ 259 (370)
T 3vas_A 180 QVYYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVH 259 (370)
T ss_dssp SEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHH
T ss_pred CEEEEEeeeccCCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEcCHHHHHHHhcccCCCccCHH
Confidence 999998854 357789999999999999999997431 134578899999999999999999986544445666
Q ss_pred HHHHHHhh
Q 023130 274 EAVVKCHK 281 (287)
Q Consensus 274 ~~~~~l~~ 281 (287)
+++++|.+
T Consensus 260 ~~~~~l~~ 267 (370)
T 3vas_A 260 ATARYIAD 267 (370)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 67777664
No 11
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.97 E-value=1.7e-31 Score=237.94 Aligned_cols=193 Identities=23% Similarity=0.228 Sum_probs=162.9
Q ss_pred CCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCC
Q 023130 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVR 146 (287)
Q Consensus 67 ~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd 146 (287)
|++|+|+|++++|++..+++.|.++++.... ....+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.||+
T Consensus 3 m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~-~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~ 81 (317)
T 2nwh_A 3 MKKILVLGGAHIDRRGMIETETAPGASNPGS-WMEEAGGGGFNAARNLSRLGFEVRIIAPRGGDVTGEVVAEAARQAGVE 81 (317)
T ss_dssp CCEEEEESCCEEEEEEEESSSCCTTSCCCEE-EEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCE
T ss_pred CCeEEEECchheEEeeccCCCCCCCCCceEe-EEEeCCcHHHHHHHHHHhcCCCcEEEEeecCCchHHHHHHHHHHcCCC
Confidence 5689999999999999999888888877665 788999999999999999999999999999999999999999999999
Q ss_pred CCceEEccCCCCCCceEEEEEcCCCCeeEEEeCC-CCCCCCCcccCchhH--hhhccccEEEEeCCCCHHHHHHHHHHHH
Q 023130 147 LDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGG-TNMSCWPEKFGDEDL--EVVKKAGIVLLQREIPDSVNIQVAKAAR 223 (287)
Q Consensus 147 ~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~g-a~~~~~~~~l~~~~~--~~l~~a~~v~~~g~~~~~~~~~~~~~a~ 223 (287)
+++ .+.+ +.+|+.++++++++|++++.++.+ .+..++++.+.. .. +.++.++++++++..+.+.+.++++.++
T Consensus 82 ~~~-~~~~--~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a~ 157 (317)
T 2nwh_A 82 DTP-FTFL--DRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKV-RAVREAIIASDFLLCDANLPEDTLTALGLIAR 157 (317)
T ss_dssp ECC-EEET--TSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTS-HHHHHHHHHCSEEEEETTSCHHHHHHHHHHHH
T ss_pred CCC-cccC--CCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhh-hhhhhHhccCCEEEEeCCCCHHHHHHHHHHHH
Confidence 999 5555 569999999999899998776654 333343333321 22 5678899999998888888999999999
Q ss_pred hCCCcEEEeCCCCC-CCCchhhccCCcEEecCHHHHHhhcCC
Q 023130 224 SAGVPVIFDAGGMD-APIPQELLNFIDILSPNESELGRLTGM 264 (287)
Q Consensus 224 ~~g~~v~~D~~~~~-~~~~~~ll~~~dil~~Ne~E~~~l~g~ 264 (287)
++|+++++||+... ...+.++++++|++++|++|++.|+|.
T Consensus 158 ~~g~~v~~Dp~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~ 199 (317)
T 2nwh_A 158 ACEKPLAAIAISPAKAVKLKAALGDIDILFMNEAEARALTGE 199 (317)
T ss_dssp HTTCCEEEECCSHHHHGGGTTTGGGCSEEEEEHHHHHHHHC-
T ss_pred hcCCeEEEeCCCHHHHHHHHHHhhhCeEecCCHHHHHHHhCC
Confidence 99999999997531 133567889999999999999999996
No 12
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=99.97 E-value=3.5e-32 Score=240.70 Aligned_cols=189 Identities=19% Similarity=0.232 Sum_probs=165.2
Q ss_pred CCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCC
Q 023130 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVR 146 (287)
Q Consensus 67 ~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd 146 (287)
|++|+|+|++++|+++.++++|..++.+........+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.||+
T Consensus 5 m~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~ 84 (302)
T 2c4e_A 5 MEKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSCVGYDFKNSGYERYLKNLDIN 84 (302)
T ss_dssp EEEEEEESCCEEEEEEECSSCCCTTCCCCCSCEEEEEECHHHHHHHHHHHTTCEEEEECEECTTTTTSHHHHHHHHTTCB
T ss_pred cCcEEEECceeEEEEecccccCCCCceeeecceeecCCCHHHHHHHHHHHCCCceEEEEEEeCCCchHHHHHHHHHcCCc
Confidence 45799999999999999999999999888888999999999999999999999999999999999999999999999999
Q ss_pred CCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccccEEEEeCCCCHHHHHHHHHHHHhCC
Q 023130 147 LDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAG 226 (287)
Q Consensus 147 ~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~~~~~~~~~~~a~~~g 226 (287)
++++.+.+ +.+|+.++++++++|+|+++.+.+++..++++++.. ..++++|+++..+ +.+.++++.++++|
T Consensus 85 ~~~~~~~~--~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~-~~~~~~~~~a~~~g 155 (302)
T 2c4e_A 85 ISKLYYSE--EEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPN------FNTEIVHIATGDP-EFNLKCAKKAYGNN 155 (302)
T ss_dssp CTTCEECS--SSCCCEEEEEECSSCCEECCEECGGGGGGGGCCCCC------CCEEEEEECSSCH-HHHHHHHHHHBTTB
T ss_pred ccceEeeC--CCCCceEEEEECCCCCEEEEEeCChhhhCCHhhcCc------ccCCEEEEeCCCc-HHHHHHHHHHHhcC
Confidence 99998877 778999999999899999888888765555444432 6789999988665 77889999999999
Q ss_pred CcEEEeCCCCCC----CCchhhccCCcEEecCHHHHHhhcCCC
Q 023130 227 VPVIFDAGGMDA----PIPQELLNFIDILSPNESELGRLTGMP 265 (287)
Q Consensus 227 ~~v~~D~~~~~~----~~~~~ll~~~dil~~Ne~E~~~l~g~~ 265 (287)
++++|++.... +.+.++++++|++++|++|++.|+|..
T Consensus 156 -~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~ 197 (302)
T 2c4e_A 156 -LVSFDPGQDLPQYSKEMLLEIIEHTNFLFMNKHEFERASNLL 197 (302)
T ss_dssp -EEEECCGGGGGGCCHHHHHHHHHTCSEEEEEHHHHHHHHHHH
T ss_pred -CEEEeCchhhhhhhHHHHHHHHhcCCEEEcCHHHHHHHhCCC
Confidence 99999985311 234568899999999999999999854
No 13
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=99.97 E-value=2.5e-31 Score=240.27 Aligned_cols=206 Identities=21% Similarity=0.268 Sum_probs=172.3
Q ss_pred CCCCEEEECCceeeeEeecCC-------CCCCCcEEEe-----------cCceeecCchHHHHHHHHHHcCCCcEEEEee
Q 023130 66 TPPPLVVVGSANFDIYVEIDR-------LPKVGETVAA-----------KTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127 (287)
Q Consensus 66 ~~~~IlviG~~~iD~~~~vd~-------~P~~~~~~~~-----------~~~~~~~GG~a~N~A~~la~LG~~~~lig~v 127 (287)
++++|+|+|++++|+++++++ +|+.+..... ......+||+++|+|+++++||.++.++|.+
T Consensus 24 ~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~ig~v 103 (352)
T 4e3a_A 24 TRFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPALEASGGSAGNTAAGVANLGGKAAYFGNV 103 (352)
T ss_dssp CSEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSCSCEEEECCHHHHHHHHHHHHTCCEEEECCC
T ss_pred CcccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhhhccEecCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 457899999999999999987 6655444332 2346899999999999999999999999999
Q ss_pred cCCchHHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccccEEEEe
Q 023130 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQ 207 (287)
Q Consensus 128 G~D~~G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~ 207 (287)
|+|.+|+++++.|++.||+++++.+.+ +.+|+.++++++++|+|+++.+.+++..++++++.. +.++.+++++++
T Consensus 104 G~D~~G~~l~~~l~~~GV~~~~~~~~~--~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~---~~~~~~~~v~~~ 178 (352)
T 4e3a_A 104 AADQLGDIFTHDIRAQGVHYQTKPKGA--FPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEA---DVVADAKVTYFE 178 (352)
T ss_dssp CSSHHHHHHHHHHHHTTCEECCCCCCS--SSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCH---HHHHTEEEEEEE
T ss_pred CCChHHHHHHHHHHHcCCccceeeccC--CCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCH---HHHhhCCEEEEe
Confidence 999999999999999999999998877 679999999999999999999998887777777754 568899999998
Q ss_pred CCC-----CHHHHHHHHHHHHhCCCcEEEeCCCCC-----CCCchhhcc--CCcEEecCHHHHHhhcCCCCCCHHHHHHH
Q 023130 208 REI-----PDSVNIQVAKAARSAGVPVIFDAGGMD-----APIPQELLN--FIDILSPNESELGRLTGMPTDSYEQISEA 275 (287)
Q Consensus 208 g~~-----~~~~~~~~~~~a~~~g~~v~~D~~~~~-----~~~~~~ll~--~~dil~~Ne~E~~~l~g~~~~~~~~~~~~ 275 (287)
|.+ +.+.+.++++.|+++|+++++|++... .+.+.++++ ++|++++|++|++.|+|. .+.+++.+.
T Consensus 179 G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g~--~~~~~a~~~ 256 (352)
T 4e3a_A 179 GYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQT--DDFEEALNR 256 (352)
T ss_dssp GGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTTC--SCHHHHHHH
T ss_pred eeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhCC--CCHHHHHHH
Confidence 753 356788999999999999999997531 123467888 899999999999999995 456665555
Q ss_pred HHH
Q 023130 276 VVK 278 (287)
Q Consensus 276 ~~~ 278 (287)
+.+
T Consensus 257 l~~ 259 (352)
T 4e3a_A 257 IAA 259 (352)
T ss_dssp HHH
T ss_pred Hhc
Confidence 444
No 14
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=99.97 E-value=1.6e-31 Score=240.09 Aligned_cols=191 Identities=23% Similarity=0.247 Sum_probs=161.1
Q ss_pred CCCCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCC
Q 023130 65 NTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCG 144 (287)
Q Consensus 65 ~~~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~g 144 (287)
+++++|+|+|++++|++...+.+|.. .......+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.|
T Consensus 2 ~~~~~v~viG~~~iD~~~~~~~~~~~-----~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~l~~~l~~~g 76 (338)
T 3ljs_A 2 SLKKTILCFGEALIDMLAQPLVKKGM-----PRAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAG 76 (338)
T ss_dssp --CCEEEEESCCEEEEEECCCSSTTS-----CCCEEEEEECHHHHHHHHHHHHTCCEEEESEEESSHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEChhhhheeccCCCCccc-----hhceeecCCChHHHHHHHHHhCCCCEEEEeeccCCHHHHHHHHHHHHcC
Confidence 46678999999999999998887643 5677889999999999999999999999999999999999999999999
Q ss_pred CCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeC--CCCCCCCCcccCchhHhhhccccEEEEeCCC-----CHHHHHH
Q 023130 145 VRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVG--GTNMSCWPEKFGDEDLEVVKKAGIVLLQREI-----PDSVNIQ 217 (287)
Q Consensus 145 Vd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~--ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~-----~~~~~~~ 217 (287)
|+++++.+.+ +.+|+.++++++++|+|++.++. +++..++++++.. +.+..++++++++.. +.+.+.+
T Consensus 77 V~~~~v~~~~--~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~ 151 (338)
T 3ljs_A 77 VVTDGIVRTS--TAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQD---ASFSDALIFHACSNSMTDADIAEVTFE 151 (338)
T ss_dssp CBCTTCEEES--SSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCH---HHHHTEEEEEEEGGGGSSHHHHHHHHH
T ss_pred CCceeEEEcC--CCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCH---hHhcCCCEEEECChHhcCchHHHHHHH
Confidence 9999999877 77999999999989999987775 5555566666643 457889999998632 2467889
Q ss_pred HHHHHHhCCCcEEEeCCCCCC---------CCchhhccCCcEEecCHHHHHhhcCCC
Q 023130 218 VAKAARSAGVPVIFDAGGMDA---------PIPQELLNFIDILSPNESELGRLTGMP 265 (287)
Q Consensus 218 ~~~~a~~~g~~v~~D~~~~~~---------~~~~~ll~~~dil~~Ne~E~~~l~g~~ 265 (287)
+++.++++|+++++||+.+.. ..+.++++++|++++|++|++.|+|..
T Consensus 152 ~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~ 208 (338)
T 3ljs_A 152 GMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTL 208 (338)
T ss_dssp HHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCC
Confidence 999999999999999975421 124568899999999999999999854
No 15
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=99.97 E-value=7.9e-32 Score=244.66 Aligned_cols=213 Identities=19% Similarity=0.244 Sum_probs=172.2
Q ss_pred CCCCCEEEECCceeeeEeecCCC------CCCCcEEEe--------------cCceeecCchHHHHHHHHHHc---CCCc
Q 023130 65 NTPPPLVVVGSANFDIYVEIDRL------PKVGETVAA--------------KTSQTLAGGKGANQAACGAKL---SHPT 121 (287)
Q Consensus 65 ~~~~~IlviG~~~iD~~~~vd~~------P~~~~~~~~--------------~~~~~~~GG~a~N~A~~la~L---G~~~ 121 (287)
+++.+|+++|++++|+++.++.. ++.|..... ......+||+++|+|+++++| |.++
T Consensus 21 ~~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~ 100 (365)
T 3loo_A 21 LRDGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTA 100 (365)
T ss_dssp CCTTSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSE
T ss_pred CCCccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcE
Confidence 45678999999999999999982 344544443 256789999999999999987 8999
Q ss_pred EEEEeecCCchHHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCc-hhHhhhcc
Q 023130 122 YFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGD-EDLEVVKK 200 (287)
Q Consensus 122 ~lig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~-~~~~~l~~ 200 (287)
.++|.||+|.+|+++++.|++.||+++++.+ + +.+|+.++++++ +|+|+++.+.+++..++++++.. ...+.+..
T Consensus 101 ~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~-~--~~~Tg~~~i~~~-~~~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~ 176 (365)
T 3loo_A 101 IFFGCVGQDEYARILEERATSNGVNVQYQRS-A--TSPTGTCAVLVT-GTQRSLCANLAAANDFTPEHLRSDGNRAYLQG 176 (365)
T ss_dssp EEEEEEESBHHHHHHHHHHHHHTCEEEEEEE-S--SSCCEEEEEEEE-TTEEEEEEECGGGGGCCGGGGGSHHHHHHHHH
T ss_pred EEEEEecCCchHHHHHHHHHHCCCceecccc-C--CCCCeEEEEEEE-CCceEEEeccchHhhCCHhHcCchhhHHHHhh
Confidence 9999999999999999999999999999887 5 569999999998 88999999999887777777753 23466889
Q ss_pred ccEEEEeCCC---CHHHHHHHHHHHHhCCCcEEEeCCCCC-----CCCchhhccCCcEEecCHHHHHhhcCCCCCCHHHH
Q 023130 201 AGIVLLQREI---PDSVNIQVAKAARSAGVPVIFDAGGMD-----APIPQELLNFIDILSPNESELGRLTGMPTDSYEQI 272 (287)
Q Consensus 201 a~~v~~~g~~---~~~~~~~~~~~a~~~g~~v~~D~~~~~-----~~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~ 272 (287)
++++|++|.. +++.+.++++.|+++|+++++|++... .+.+.++++++|++++|++|++.|+|....+.+++
T Consensus 177 ~~~v~i~G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~ 256 (365)
T 3loo_A 177 AQFFYVSGFFFTVSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDL 256 (365)
T ss_dssp CSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCH
T ss_pred CCEEEEeeeeccCCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCCCCCCH
Confidence 9999999754 356788999999999999999997431 12357788999999999999999988533333344
Q ss_pred HHHHHHHhh
Q 023130 273 SEAVVKCHK 281 (287)
Q Consensus 273 ~~~~~~l~~ 281 (287)
.+++++|.+
T Consensus 257 ~~~~~~l~~ 265 (365)
T 3loo_A 257 REIGKRIAA 265 (365)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 455555543
No 16
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=99.97 E-value=3.3e-30 Score=230.82 Aligned_cols=212 Identities=15% Similarity=0.126 Sum_probs=161.1
Q ss_pred CCCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCC
Q 023130 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGV 145 (287)
Q Consensus 66 ~~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gV 145 (287)
.|++|+|+|++++|++... |..+..........++||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.||
T Consensus 2 ~m~~i~viG~~~~D~~~~~---~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv 78 (330)
T 3iq0_A 2 SLSKVFTIGEILVEIMASK---IGQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGNDGFGDINIHRLAADGV 78 (330)
T ss_dssp --CEEEEESCCEEEEEEEE---ETCCSSSCEEEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEcceeEEEeccC---CCCCccccccccCcCCCCHHHHHHHHHHHCCCcEEEEEEeCCChHHHHHHHHHHHcCC
Confidence 4578999999999999763 2222222222345789999999999999999999999999999999999999999999
Q ss_pred CCCceEEccCCCCCCceEEEEEcCCCCeeEEEeC-C-CCCCCCCcccCchhHhhhccccEEEEeCCCC-----HHHHHHH
Q 023130 146 RLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVG-G-TNMSCWPEKFGDEDLEVVKKAGIVLLQREIP-----DSVNIQV 218 (287)
Q Consensus 146 d~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~-g-a~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~-----~~~~~~~ 218 (287)
+++++.+.+ +.+|+.+++.++++|+|++.++. + +...+.++++.. +.++.+++++++|..+ .+.+.++
T Consensus 79 ~~~~v~~~~--~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~~v~~sg~~~~~~~~~~~~~~~ 153 (330)
T 3iq0_A 79 DIRGISVLP--LEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDE---NILKDCTHFHIMGSSLFSFHMVDAVKKA 153 (330)
T ss_dssp BCTTEEEET--TSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCG---GGGTTEEEEEEEGGGCSSHHHHHHHHHH
T ss_pred CeeeEEEcC--CCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCH---hHhccCCEEEEechhhcCcchHHHHHHH
Confidence 999999887 77999999999989999655443 3 344445555543 4678899999988643 3567889
Q ss_pred HHHHHhCCCcEEEeCCCCCCC--------CchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhhhcccCC
Q 023130 219 AKAARSAGVPVIFDAGGMDAP--------IPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMVSVGT 287 (287)
Q Consensus 219 ~~~a~~~g~~v~~D~~~~~~~--------~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~v~v~t 287 (287)
++.++++|+++++|++..... .+.++++++|+++||++|++.|+|. .+.+++.+.+.+...+.+|.|
T Consensus 154 ~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~--~~~~~~~~~l~~~g~~~vvvT 228 (330)
T 3iq0_A 154 VTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSPH--STPERAIAGFLEEGVKEVIVK 228 (330)
T ss_dssp HHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHHHTCSEECCBGGGTTTTCSC--SSHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHHhhCCEEecCHHHHHHHhCC--CCHHHHHHHHHHcCCCEEEEE
Confidence 999999999999999875321 2356789999999999999999995 456666555555444444443
No 17
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=99.97 E-value=2e-31 Score=240.23 Aligned_cols=208 Identities=16% Similarity=0.235 Sum_probs=170.9
Q ss_pred CCCCEEEECCceeeeEeecCC--------------------CCCCCcEEEecCceeecCchHHHHHHHHHHc----CCC-
Q 023130 66 TPPPLVVVGSANFDIYVEIDR--------------------LPKVGETVAAKTSQTLAGGKGANQAACGAKL----SHP- 120 (287)
Q Consensus 66 ~~~~IlviG~~~iD~~~~vd~--------------------~P~~~~~~~~~~~~~~~GG~a~N~A~~la~L----G~~- 120 (287)
+..+|+++|++++|+++.+++ +|..++.+........+||+++|+|+++++| |.+
T Consensus 6 ~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~ 85 (347)
T 3otx_A 6 APLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKF 85 (347)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSS
T ss_pred CCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCe
Confidence 557899999999999999986 4444455555577899999999999999999 998
Q ss_pred cEEEEeecCCchHHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCch-hHhhhc
Q 023130 121 TYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDE-DLEVVK 199 (287)
Q Consensus 121 ~~lig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~-~~~~l~ 199 (287)
+.++|.||+|.+|+++++.|++.||+++++. .+ +.+|+.++++++ +|+|+++.+.+++..++++++... ..+.++
T Consensus 86 ~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~-~~--~~~T~~~~i~~~-~g~r~~~~~~ga~~~~~~~~~~~~~~~~~~~ 161 (347)
T 3otx_A 86 VTYVGCIADDRYGKVLKEAAEHEGIVMAVEH-TT--KAGSGACAVCIT-GKERTLVADLGAANHLSSEHMRSPAVVRAMD 161 (347)
T ss_dssp EEEECEECSSHHHHHHHHHHHHHTCEECCEE-CS--SSCEEEEEEEEE-TTEEEEEEEEEGGGGCCHHHHTSHHHHHHHH
T ss_pred EEEEEEecCChHHHHHHHHHHHCCCceeccc-CC--CCCCeEEEEEEE-CCceeeeechhhhhcCCHHHcCchhhHHHHh
Confidence 9999999999999999999999999999985 45 569999999998 899999988888777766666532 346788
Q ss_pred cccEEEEeCC---CCHHHHHHHHHHHHhCCCcEEEeCCCCC-----CCCchhhccCCcEEecCHHHHHhhcCCCC---CC
Q 023130 200 KAGIVLLQRE---IPDSVNIQVAKAARSAGVPVIFDAGGMD-----APIPQELLNFIDILSPNESELGRLTGMPT---DS 268 (287)
Q Consensus 200 ~a~~v~~~g~---~~~~~~~~~~~~a~~~g~~v~~D~~~~~-----~~~~~~ll~~~dil~~Ne~E~~~l~g~~~---~~ 268 (287)
.++++|++|. .+.+.+.++++.|+++|+++++|++... .+.+.++++++|++++|++|++.|+|... .+
T Consensus 162 ~~~~~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~~~~~~~ 241 (347)
T 3otx_A 162 ESRIFYFSGFTLTVDVNHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDC 241 (347)
T ss_dssp HCSEEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHHTCCCCC
T ss_pred hCCEEEEeeeecccCHHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHhhCCEEecCHHHHHHHhcccCCCcCC
Confidence 9999999874 4578899999999999999999997421 23457889999999999999999987422 34
Q ss_pred HHHHHHHHH
Q 023130 269 YEQISEAVV 277 (287)
Q Consensus 269 ~~~~~~~~~ 277 (287)
.+++.+.+.
T Consensus 242 ~~~~~~~l~ 250 (347)
T 3otx_A 242 VEEIARRAV 250 (347)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444433
No 18
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=99.97 E-value=6.3e-31 Score=235.21 Aligned_cols=191 Identities=19% Similarity=0.193 Sum_probs=157.0
Q ss_pred CCCCCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhC
Q 023130 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGC 143 (287)
Q Consensus 64 ~~~~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~ 143 (287)
..++++|+|+|++++|++...+.+|.. ........+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.
T Consensus 18 ~~~~~~v~viG~~~~D~~~~~~~~p~~----~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~ 93 (327)
T 3hj6_A 18 SKGDLDVVSLGEILVDMISTEEVNSLS----QSREYTRHFGGSPANIAVNLSRLGKKVALISRLGADAFGNYLLDVLKGE 93 (327)
T ss_dssp ----CCEEEESCCEEEEECCCCCSSGG----GCCEEEEEEECHHHHHHHHHHHTTCCEEEECEEESSHHHHHHHHHHHHT
T ss_pred ccCCCCEEEEccceEEEeccCCCCCcc----ccceeeeecCcHHHHHHHHHHHcCCcEEEEEEeCCCHHHHHHHHHHHHc
Confidence 445678999999999999888877653 3556778999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccccEEEEeCC-----CCHHHHHHH
Q 023130 144 GVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQRE-----IPDSVNIQV 218 (287)
Q Consensus 144 gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~-----~~~~~~~~~ 218 (287)
||+++++.+.+ +.+|+.+++..+ +|+|+++.+++++..+.++++. .+.+++++++++++. .+.+.+.++
T Consensus 94 gv~~~~v~~~~--~~~t~~~~v~~~-~g~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~v~~~g~~l~~~~~~~~~~~~ 167 (327)
T 3hj6_A 94 QIITDGIQQDK--ERRTTIVYVSKS-TRTPDWLPYREADMYLQEDDII---FELIKRSKVFHLSTFILSRKPARDTAIKA 167 (327)
T ss_dssp TCBCTTCEEES--SSCCCEEEECCC-TTCCCEEEECSGGGGCCSCCCH---HHHHC--CEEEEESHHHHSHHHHHHHHHH
T ss_pred CCCcccEEEcC--CCCceEEEEEec-CCCccEEEecChhhhCChhhcC---HhHhccCCEEEECchHhcCchhHHHHHHH
Confidence 99999999877 678998887775 6999998888877666555443 256789999999873 234678899
Q ss_pred HHHHHhCCCcEEEeCCCCCC---------CCchhhccCCcEEecCHHHHHhhcCC
Q 023130 219 AKAARSAGVPVIFDAGGMDA---------PIPQELLNFIDILSPNESELGRLTGM 264 (287)
Q Consensus 219 ~~~a~~~g~~v~~D~~~~~~---------~~~~~ll~~~dil~~Ne~E~~~l~g~ 264 (287)
++.++++|+++++|+++... +.+.++++++|++++|++|++.|+|.
T Consensus 168 ~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 222 (327)
T 3hj6_A 168 FNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGP 222 (327)
T ss_dssp HHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTT
T ss_pred HHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC
Confidence 99999999999999986431 12357889999999999999999996
No 19
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.97 E-value=1.7e-29 Score=227.50 Aligned_cols=206 Identities=13% Similarity=0.091 Sum_probs=165.4
Q ss_pred CCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCC
Q 023130 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVR 146 (287)
Q Consensus 67 ~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd 146 (287)
|++|+|+|++++|++. |.+++..........+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.||+
T Consensus 2 ~~~v~viG~~~~D~~~-----~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~ 76 (346)
T 3ktn_A 2 SLKIAAFGEVMLRFTP-----PEYLMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLGEAGKAALRKLGIS 76 (346)
T ss_dssp CCEEEEECCCEEEEEC-----STTCCTTTCSCCEEEEECHHHHHHHHHHHTTCEEEEEEEECSSHHHHHHHHHHHHTTCB
T ss_pred CCcEEEeChhhhhhcC-----CCCCcccccceeEEeccCHHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHcCCc
Confidence 4689999999999983 34466667778899999999999999999999999999999999999999999999999
Q ss_pred CCceEEccCCCCCCceEEEEEcCCCCeeEEEe-C---CCCCCCCCcccCchhHhhhccccEEEEeCCCC---H---HHHH
Q 023130 147 LDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIV-G---GTNMSCWPEKFGDEDLEVVKKAGIVLLQREIP---D---SVNI 216 (287)
Q Consensus 147 ~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~-~---ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~---~---~~~~ 216 (287)
++++.+.+ .+|+.+++.++.+++++++.+ . ++...++++++. ..+.+..+++++++|..+ + +.+.
T Consensus 77 ~~~v~~~~---~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~--~~~~~~~~~~v~~~g~~~~~~~~~~~~~~ 151 (346)
T 3ktn_A 77 DQWVGEKG---DHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYD--FEAFLAEVDMVHICGISLSLTEKTRDAAL 151 (346)
T ss_dssp CTTEEECC---SCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSC--HHHHHTTCSEEEECTHHHHHCHHHHHHHH
T ss_pred ceEEEeCC---CceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcC--hHHHhCCCCEEEEeCccccCCHHHHHHHH
Confidence 99998754 489999998876667677777 3 334444455553 235688999999987543 2 5688
Q ss_pred HHHHHHHhCCCcEEEeCCCCCC-----------CCchhhccCCcEEecCHHHHHhhcCCC-CC---CHHHHHHHHHHHhh
Q 023130 217 QVAKAARSAGVPVIFDAGGMDA-----------PIPQELLNFIDILSPNESELGRLTGMP-TD---SYEQISEAVVKCHK 281 (287)
Q Consensus 217 ~~~~~a~~~g~~v~~D~~~~~~-----------~~~~~ll~~~dil~~Ne~E~~~l~g~~-~~---~~~~~~~~~~~l~~ 281 (287)
++++.++++|+++++|++.+.. +.+.++++++|++++|++|++.|+|.+ .. +.+++.+++++|.+
T Consensus 152 ~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~l~~ 231 (346)
T 3ktn_A 152 ILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELIQRFMS 231 (346)
T ss_dssp HHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCCCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCCCccccchHHHHHHHHHHHH
Confidence 9999999999999999985431 224568899999999999999999975 22 45667777777665
Q ss_pred h
Q 023130 282 M 282 (287)
Q Consensus 282 ~ 282 (287)
+
T Consensus 232 ~ 232 (346)
T 3ktn_A 232 Q 232 (346)
T ss_dssp H
T ss_pred h
Confidence 3
No 20
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=99.97 E-value=5.5e-30 Score=230.00 Aligned_cols=213 Identities=17% Similarity=0.154 Sum_probs=165.8
Q ss_pred CCCCCCCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHH
Q 023130 62 NPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALS 141 (287)
Q Consensus 62 ~~~~~~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~ 141 (287)
+++.++++|+|+|++++|++... +++..........+||+++|+|+++++||.++.++|.+|+|.+|+++++.|+
T Consensus 21 ~~m~~~~~vlviG~~~iD~~~~~-----~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~ 95 (336)
T 4du5_A 21 QSMTSALDVITFGEAMMLLVADR-----PGPLEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLAAMA 95 (336)
T ss_dssp -----CEEEEEECCCEEEEEESS-----SSCGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHH
T ss_pred eccCCCCCEEEEChhhhhccCCC-----CCccchhhheeecCCCHHHHHHHHHHhCCCcEEEEEEeCCCHHHHHHHHHHH
Confidence 34556678999999999998642 4566677788899999999999999999999999999999999999999999
Q ss_pred hCCCCCCceEEccCCCCCCceEEEEEcCCCCee-EEEe--CCCCCCCCCcccCchhHhhhccccEEEEeCCCC------H
Q 023130 142 GCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNS-IIIV--GGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIP------D 212 (287)
Q Consensus 142 ~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~-~~~~--~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~------~ 212 (287)
+.||+++++.+.+ +.+|+.+++.++++|+++ +.++ .++...++++++.. +.+..+++++++|..+ .
T Consensus 96 ~~GV~~~~v~~~~--~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~---~~l~~~~~v~~~g~~~~~~~~~~ 170 (336)
T 4du5_A 96 AEGIDCSHVVCDA--TQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDE---AWLLSARHLHATGVFPAISATTL 170 (336)
T ss_dssp TTTCEEEEEEECT--TSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCH---HHHTTEEEEEEESSGGGSCTTHH
T ss_pred HcCCCcceEEEcC--CCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCH---hHhccCCEEEEcCchhhCChHHH
Confidence 9999999999888 779999999999889554 4343 34555555555543 5678899999987432 3
Q ss_pred HHHHHHHHHHHhCCCcEEEeCCCCCC---------CCchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhhhc
Q 023130 213 SVNIQVAKAARSAGVPVIFDAGGMDA---------PIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMV 283 (287)
Q Consensus 213 ~~~~~~~~~a~~~g~~v~~D~~~~~~---------~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~v 283 (287)
+.+.++++.++++|+++++||+.+.. ..+.++++++|+++||++|++.|+|. ++.+++.+.+.++..+.
T Consensus 171 ~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g~--~~~~~~~~~l~~~g~~~ 248 (336)
T 4du5_A 171 PAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGE--TTPEGVARFYRQLGAKL 248 (336)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHCC--CSHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhCC--CCHHHHHHHHHhcCCCE
Confidence 56788999999999999999985421 12356789999999999999999995 45666655555554444
Q ss_pred ccC
Q 023130 284 SVG 286 (287)
Q Consensus 284 ~v~ 286 (287)
+|.
T Consensus 249 vvv 251 (336)
T 4du5_A 249 VVV 251 (336)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 21
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.97 E-value=6.4e-30 Score=227.87 Aligned_cols=203 Identities=16% Similarity=0.134 Sum_probs=158.1
Q ss_pred CCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcC----CCcEEEEeecCCchHHHHHHHHHhC
Q 023130 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLS----HPTYFVGQVGEDANGKLITDALSGC 143 (287)
Q Consensus 68 ~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG----~~~~lig~vG~D~~G~~i~~~L~~~ 143 (287)
++|+|+|++++|++... ......+||+++|+|+++++|| .++.++|.+|+|.+|+++++.|++.
T Consensus 5 ~~i~viG~~~~D~~~~~------------~~~~~~~GG~~~NvA~~la~LG~~~~~~~~~ig~vG~D~~G~~l~~~L~~~ 72 (319)
T 3lhx_A 5 KKIAVIGECMIELSEKG------------ADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGE 72 (319)
T ss_dssp EEEEEESCCEEEEEC---------------CCEEEEECHHHHHHHHHHTTSCTTTEEEEEECEECSSHHHHHHHHHHHTT
T ss_pred CceeeechhhhhhccCC------------CceEEecCChHHHHHHHHHHcCCCCCCcEEEEEEeCCCHHHHHHHHHHHHc
Confidence 58999999999998432 2457899999999999999999 8999999999999999999999999
Q ss_pred CCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCC---CCCCcccCchhHhhhccccEEEEeCCC----C---HH
Q 023130 144 GVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM---SCWPEKFGDEDLEVVKKAGIVLLQREI----P---DS 213 (287)
Q Consensus 144 gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~---~~~~~~l~~~~~~~l~~a~~v~~~g~~----~---~~ 213 (287)
||+++++.+.+ +.+|+.++++++++|+|+++++++... .+.+.++. ...+.++.++++++++.. + .+
T Consensus 73 GV~~~~v~~~~--~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~v~~~g~~~~~l~~~~~~ 149 (319)
T 3lhx_A 73 NVDTSLTQRME--NRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSA-AICEELANFDYLYLSGISLAILSPTSRE 149 (319)
T ss_dssp TEECTTCEECT--TCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHH-HHHHHHTTCSEEEEEHHHHHTSCHHHHH
T ss_pred CCCcceEEEcC--CCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchh-hHHHHhcCCCEEEEcCchhhhcCchhHH
Confidence 99999999887 779999999999899999998887532 23333332 234678899999998632 2 35
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCCCCC---------CchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhhhcc
Q 023130 214 VNIQVAKAARSAGVPVIFDAGGMDAP---------IPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMVS 284 (287)
Q Consensus 214 ~~~~~~~~a~~~g~~v~~D~~~~~~~---------~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~v~ 284 (287)
.+.++++.++++|+++++||+..... .+.++++++|++++|++|++.|+|. .+.+++.+.+.++..+.+
T Consensus 150 ~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g~--~~~~~~~~~l~~~g~~~v 227 (319)
T 3lhx_A 150 KLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQ--QPVEDVIARTHNAGVKEV 227 (319)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHCC--CCHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhCC--CCHHHHHHHHHhcCCCEE
Confidence 68899999999999999999864321 2357889999999999999999995 456665555555444444
Q ss_pred cCC
Q 023130 285 VGT 287 (287)
Q Consensus 285 v~t 287 (287)
|.|
T Consensus 228 vvt 230 (319)
T 3lhx_A 228 VVK 230 (319)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 22
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.96 E-value=1e-29 Score=227.54 Aligned_cols=204 Identities=16% Similarity=0.161 Sum_probs=161.6
Q ss_pred CCCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHc--CCCcEEEEeecCCchHHHHHHHHHhC
Q 023130 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKL--SHPTYFVGQVGEDANGKLITDALSGC 143 (287)
Q Consensus 66 ~~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~L--G~~~~lig~vG~D~~G~~i~~~L~~~ 143 (287)
+|++|+|+|++++|++.. | ++ ..+...+||+++|+|+++++| |.++.++|.+|+|.+|+++++.|++.
T Consensus 22 ~m~~i~viG~~~iD~~~~----~--~~----~~~~~~~GG~~~NvA~~la~Lg~G~~~~~ig~vG~D~~G~~l~~~L~~~ 91 (328)
T 4e69_A 22 SMMHILSIGECMAELAPA----D--LP----GTYRLGFAGDTFNTAWYLARLRPESRISYFSAIGDDALSQQMRAAMSAA 91 (328)
T ss_dssp SSCEEEEESCCEEEEEEC----S--ST----TEEEEEEECHHHHHHHHHHHHCTTSEEEEECEECSSHHHHHHHHHHHHT
T ss_pred cCCcEEEecCcEEEEecC----C--CC----CceEEecCCHHHHHHHHHHhcCCCCcEEEEEeeCCCHHHHHHHHHHHHc
Confidence 456899999999999964 1 22 456788999999999999999 89999999999999999999999999
Q ss_pred CCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCC---CCCcccCchhHhhhccccEEEEeCC----C---CHH
Q 023130 144 GVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMS---CWPEKFGDEDLEVVKKAGIVLLQRE----I---PDS 213 (287)
Q Consensus 144 gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~---~~~~~l~~~~~~~l~~a~~v~~~g~----~---~~~ 213 (287)
||+++++.+.+ +.+|+.++++++ +|+|++++++++... +...++ ..+.+.+++++++++. . +.+
T Consensus 92 GV~~~~v~~~~--~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~g~~~~~~~~~~~~ 165 (328)
T 4e69_A 92 GIDGGGLRVIP--GRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADA---LAAAMARADVVYFSGITLAILDQCGRA 165 (328)
T ss_dssp TEECTTCEECT--TCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHHH---HHHHHTTCSEEEEEHHHHHTSCHHHHH
T ss_pred CCccceEEEcC--CCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCcccc---chHHhcCCCEEEECCchhhccCchHHH
Confidence 99999999887 779999999999 999999988876432 111111 2266889999999863 1 235
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCCCC---------CCchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhhhcc
Q 023130 214 VNIQVAKAARSAGVPVIFDAGGMDA---------PIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMVS 284 (287)
Q Consensus 214 ~~~~~~~~a~~~g~~v~~D~~~~~~---------~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~v~ 284 (287)
.+.++++.+++.|+++++||+.... +.++++++++|++++|++|++.|+|. ++.+++.+.+.++..+.+
T Consensus 166 ~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~--~~~~~~~~~l~~~g~~~v 243 (328)
T 4e69_A 166 TLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFGD--AGPDATADRYARAGVRSV 243 (328)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHTC--SSHHHHHHHHHTTTCSEE
T ss_pred HHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcCC--CCHHHHHHHHHhcCCCEE
Confidence 6788999999999999999975421 12467889999999999999999995 355555555444444444
Q ss_pred cCC
Q 023130 285 VGT 287 (287)
Q Consensus 285 v~t 287 (287)
|.|
T Consensus 244 vvt 246 (328)
T 4e69_A 244 VVK 246 (328)
T ss_dssp EEB
T ss_pred EEE
Confidence 443
No 23
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=99.96 E-value=1.1e-30 Score=235.19 Aligned_cols=212 Identities=18% Similarity=0.223 Sum_probs=170.2
Q ss_pred CCCCEEEECCceeeeEeecCC-C-----CCCCcEEEe--------------cCceeecCchHHHHHHHHHHcC----CCc
Q 023130 66 TPPPLVVVGSANFDIYVEIDR-L-----PKVGETVAA--------------KTSQTLAGGKGANQAACGAKLS----HPT 121 (287)
Q Consensus 66 ~~~~IlviG~~~iD~~~~vd~-~-----P~~~~~~~~--------------~~~~~~~GG~a~N~A~~la~LG----~~~ 121 (287)
+.++|+|+|++++|+++.+++ + +.+++.+.+ ......+||+++|+|+++++|| .++
T Consensus 5 ~~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~ 84 (345)
T 1bx4_A 5 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAA 84 (345)
T ss_dssp CTTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCE
T ss_pred ccccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcE
Confidence 456899999999999999987 2 456665554 5678899999999999999996 899
Q ss_pred EEEEeecCCchHHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCc-ccCc-hhHhhhc
Q 023130 122 YFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE-KFGD-EDLEVVK 199 (287)
Q Consensus 122 ~lig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~-~l~~-~~~~~l~ 199 (287)
.++|.+|+|.+|+++++.|++.||+++++.. + +.+|+.++++++ +|+|+++.+.+++..++++ ++.. ...+.+.
T Consensus 85 ~~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~-~--~~~T~~~~~~~~-~g~r~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 160 (345)
T 1bx4_A 85 TFFGCIGIDKFGEILKRKAAEAHVDAHYYEQ-N--EQPTGTCAACIT-GDNRSLIANLAAANCYKKEKHLDLEKNWMLVE 160 (345)
T ss_dssp EEEEEEESSHHHHHHHHHHHHTTCEEEEEEE-S--SSCCCEEEEEEE-TTEEEEEEECGGGGGCCGGGTTTSHHHHHHHH
T ss_pred EEEEEeCCChhHHHHHHHHHHcCCceeeeec-C--CCCCceEEEEEc-CCceEeeeccchHhhcCcccccCcHHHHHHHh
Confidence 9999999999999999999999999999874 4 569999999997 7899888888877666666 6653 2345678
Q ss_pred cccEEEEeCC---CCHHHHHHHHHHHHhCCCcEEEeCCCCC-----CCCchhhccCCcEEecCHHHHHhhcCCCCCCHHH
Q 023130 200 KAGIVLLQRE---IPDSVNIQVAKAARSAGVPVIFDAGGMD-----APIPQELLNFIDILSPNESELGRLTGMPTDSYEQ 271 (287)
Q Consensus 200 ~a~~v~~~g~---~~~~~~~~~~~~a~~~g~~v~~D~~~~~-----~~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~ 271 (287)
.++++++++. .+.+.+.++++.++++|+++++|+.... .+.+.++++++|++++|++|++.|+|....+.++
T Consensus 161 ~~~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~ 240 (345)
T 1bx4_A 161 KARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKD 240 (345)
T ss_dssp HCSEEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCC
T ss_pred hCCEEEEEEEeccCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHhccCCEEeCCHHHHHHHhcccCCCCCC
Confidence 8999999863 4667889999999999999999997431 1224568999999999999999998753222334
Q ss_pred HHHHHHHHhh
Q 023130 272 ISEAVVKCHK 281 (287)
Q Consensus 272 ~~~~~~~l~~ 281 (287)
+.+++++|.+
T Consensus 241 ~~~~~~~l~~ 250 (345)
T 1bx4_A 241 IKEIAKKTQA 250 (345)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 5555566654
No 24
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=99.96 E-value=8.1e-30 Score=228.73 Aligned_cols=198 Identities=20% Similarity=0.168 Sum_probs=165.6
Q ss_pred CCEEEECCceeeeEeec----------CCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHH
Q 023130 68 PPLVVVGSANFDIYVEI----------DRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137 (287)
Q Consensus 68 ~~IlviG~~~iD~~~~v----------d~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~ 137 (287)
++|+|+|++++|+++.+ +++|..+++..+......+||+++|+|+++++||.++.++|.+|+| +|+ ++
T Consensus 11 m~i~v~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~g~-i~ 88 (334)
T 2pkf_A 11 MTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVLGGEVALVGAAGAD-FAD-YR 88 (334)
T ss_dssp SEEEEESCCEEEEEEECSSCTHHHHTTSCGGGCCCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECGG-GHH-HH
T ss_pred CeEEEECChhheEEEecChHHhhhhchhhccccccccccccceecCCChHHHHHHHHHHcCCCeEEEEEEeCc-hHH-HH
Confidence 47999999999999998 8888888887778888999999999999999999999999999999 999 99
Q ss_pred HHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccccEEEEeCCCCHHHHHH
Q 023130 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQ 217 (287)
Q Consensus 138 ~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~~~~~~~ 217 (287)
+.|++.||+++++.+.+ +.+|+.++++++++|++++.++++++..+.++++.. ....+..++++++++..+ +.+.+
T Consensus 89 ~~L~~~gV~~~~v~~~~--~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~-~~~~l~~~~~v~~~~~~~-~~~~~ 164 (334)
T 2pkf_A 89 DWLKARGVNCDHVLISE--TAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLAD-VVSAIGKPELVIIGANDP-EAMFL 164 (334)
T ss_dssp HHHHTTTEECTTCEECS--SCCCEEEEEEECTTCCEEEEEECGGGGGGGGCCHHH-HHHHHCSCSEEEEESCCH-HHHHH
T ss_pred HHHHHCCCceeeeEecC--CCCceEEEEEEcCCCCEEEEECCchhhhCCHhhcCh-hhhhhcCCCEEEEcCCCh-HHHHH
Confidence 99999999999999887 679999999999889999888887655544444432 113357899999987654 56888
Q ss_pred HHHHHHhCCCcEEEeCCCCCC----CCchhhccCCcEEecCHHHHHhhcCCCCCCHHH
Q 023130 218 VAKAARSAGVPVIFDAGGMDA----PIPQELLNFIDILSPNESELGRLTGMPTDSYEQ 271 (287)
Q Consensus 218 ~~~~a~~~g~~v~~D~~~~~~----~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~ 271 (287)
+++.++++|+++++|++.... +.+.++++++|++++|++|++.|+|....+.++
T Consensus 165 ~~~~a~~~g~~v~~D~~~~~~~~~~~~l~~~l~~~dil~~N~~E~~~l~g~~~~~~~~ 222 (334)
T 2pkf_A 165 HTEECRKLGLAFAADPSQQLARLSGEEIRRLVNGAAYLFTNDYEWDLLLSKTGWSEAD 222 (334)
T ss_dssp HHHHHHHHTCCEEEECGGGGGTSCHHHHHTTTTTCSEEEEEHHHHHHHHHHHCCCHHH
T ss_pred HHHHHHhcCCeEEEeccchhhhhhHHHHHHHHhcCCEEecCHHHHHHHhccCCCCHHH
Confidence 999999999999999986421 224578899999999999999999854334443
No 25
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=99.96 E-value=3e-29 Score=223.37 Aligned_cols=211 Identities=15% Similarity=0.187 Sum_probs=164.1
Q ss_pred CCCCCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhC
Q 023130 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGC 143 (287)
Q Consensus 64 ~~~~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~ 143 (287)
++++++|+|+|++++|++...+..|.. ....+...+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.
T Consensus 5 ~~~~~~v~~iG~~~~D~~~~~~~~p~~----~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~ 80 (319)
T 3pl2_A 5 LTSTHEVLAIGRLGVDIYPLQSGVGLA----DVQSFGKYLGGSAANVSVAAARHGHNSALLSRVGNDPFGEYLLAELERL 80 (319)
T ss_dssp --CCCSEEEESCCEEEECBSSSSCCGG----GCCCBCCEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHT
T ss_pred cccCCCEEEEChhheeeecccCCCCcc----ccceeeecCCCcHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHc
Confidence 456679999999999999877776643 3466788999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCC--C-CCCCCCcccCchhHhhhccccEEEEeCCC-----CHHHH
Q 023130 144 GVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGG--T-NMSCWPEKFGDEDLEVVKKAGIVLLQREI-----PDSVN 215 (287)
Q Consensus 144 gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~g--a-~~~~~~~~l~~~~~~~l~~a~~v~~~g~~-----~~~~~ 215 (287)
||+++++.+.+ +.+|+.+++.++++|+++++++.+ + +..+.++++. .+.+..++++++++.. +.+.+
T Consensus 81 gv~~~~v~~~~--~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~ 155 (319)
T 3pl2_A 81 GVDNQYVATDQ--TFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVS---LDDVREADILWFTLTGFSEEPSRGTH 155 (319)
T ss_dssp TEECTTEEEES--SSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSC---HHHHHHCSEEEEEGGGGSSTTHHHHH
T ss_pred CCccccEEecC--CCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCC---HHHhccCCEEEEecccccCchhHHHH
Confidence 99999998887 779999999888889998888754 3 3344445553 2567889999998742 23445
Q ss_pred HHHHHHHHhCCCcEEEeCCCCCCC---------CchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhhhcccC
Q 023130 216 IQVAKAARSAGVPVIFDAGGMDAP---------IPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMVSVG 286 (287)
Q Consensus 216 ~~~~~~a~~~g~~v~~D~~~~~~~---------~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~v~v~ 286 (287)
..+++.+++ +.++++|++.+... .+.++++++|++++|++|++.|+|. .+.+++.+.+.+...+.+|.
T Consensus 156 ~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~--~~~~~~~~~l~~~g~~~vvv 232 (319)
T 3pl2_A 156 REILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGE--TEPERAGRALLERGVELAIV 232 (319)
T ss_dssp HHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSC--CSHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCC--CCHHHHHHHHHhcCCCEEEE
Confidence 666666655 67889999865322 2457889999999999999999995 45555555554444444443
No 26
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.96 E-value=8.1e-29 Score=219.65 Aligned_cols=204 Identities=17% Similarity=0.216 Sum_probs=167.6
Q ss_pred CCCEEEE-CCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCC
Q 023130 67 PPPLVVV-GSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGV 145 (287)
Q Consensus 67 ~~~Ilvi-G~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gV 145 (287)
|+.|+++ +++++|+++.++++ .+|+++++......+||+++|+|+++++||.++.++|.+|+| +|+++++.|++.||
T Consensus 1 m~~i~~v~~n~~~D~~~~v~~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv 78 (309)
T 3umo_A 1 MVRIYTLTLAPSLDSATITPQI-YPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENV 78 (309)
T ss_dssp CCCEEEECSSCEEEEEEEESCC-CSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTC
T ss_pred CCcEEEEecchhheEEEEcCcc-cCCCeEEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCC
Confidence 3457666 68999999999999 799999999999999999999999999999999999999999 99999999999999
Q ss_pred CCCceEEccCCCCCCceEEEEEc-CCCCeeEEEeCCCCCCCCCcccCchhHh---hhccccEEEEeCCCC----HHHHHH
Q 023130 146 RLDYMNVVKDGGVPTGHAVVMLQ-SDGQNSIIIVGGTNMSCWPEKFGDEDLE---VVKKAGIVLLQREIP----DSVNIQ 217 (287)
Q Consensus 146 d~~~v~~~~~~~~~T~~~~v~i~-~~Ger~~~~~~ga~~~~~~~~l~~~~~~---~l~~a~~v~~~g~~~----~~~~~~ 217 (287)
+++++.+.+ +|+.++.+++ ++|+++++.+++++ ++++++. ...+ .+..++++++++.++ .+.+.+
T Consensus 79 ~~~~v~~~~----~t~~~~~~~~~~~g~~~~~~~~g~~--~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 151 (309)
T 3umo_A 79 PVATVEAKD----WTRQNLHVHVEASGEQYRFVMPGAA--LNEDEFR-QLEEQVLEIESGAILVISGSLPPGVKLEKLTQ 151 (309)
T ss_dssp CEEEEECSS----CCCCCEEEEETTTCCEEEEECCCCC--CCHHHHH-HHHHHHTTSCTTCEEEEESCCCTTCCHHHHHH
T ss_pred ceEEEEecC----CCeeEEEEEECCCCcEEEEEcCCCC--CCHHHHH-HHHHHHHhcCCCCEEEEEccCCCCCCHHHHHH
Confidence 999887754 5677666665 48999988888764 3444442 2222 245788999998654 577899
Q ss_pred HHHHHHhCCCcEEEeCCCCCCCCchhhccC--CcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhhh
Q 023130 218 VAKAARSAGVPVIFDAGGMDAPIPQELLNF--IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKM 282 (287)
Q Consensus 218 ~~~~a~~~g~~v~~D~~~~~~~~~~~ll~~--~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~ 282 (287)
+++.++++|+++++|++. ..+.++++. +|++++|++|++.|+|.+..+.+++.+++++|.++
T Consensus 152 ~~~~a~~~~~~v~~D~~~---~~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~ 215 (309)
T 3umo_A 152 LISAAQKQGIRCIVDSSG---EALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNS 215 (309)
T ss_dssp HHHHHHHTTCEEEEECCH---HHHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHT
T ss_pred HHHHHHhcCCEEEEECCc---HHHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHHHHHHHc
Confidence 999999999999999974 235567777 59999999999999998766667777777777653
No 27
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=99.96 E-value=3.1e-30 Score=234.72 Aligned_cols=214 Identities=17% Similarity=0.178 Sum_probs=171.0
Q ss_pred CCCCCEEEECCceeeeEeecCC-------CCCCCcEE-------------EecCceeecCchHHHHHHHHHHcCCC---c
Q 023130 65 NTPPPLVVVGSANFDIYVEIDR-------LPKVGETV-------------AAKTSQTLAGGKGANQAACGAKLSHP---T 121 (287)
Q Consensus 65 ~~~~~IlviG~~~iD~~~~vd~-------~P~~~~~~-------------~~~~~~~~~GG~a~N~A~~la~LG~~---~ 121 (287)
.+...|+++|++++|+++++|+ +++..... ...+....+||+++|+|+++++||.+ +
T Consensus 24 ~~~~~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~ 103 (372)
T 3uq6_A 24 LSEGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVC 103 (372)
T ss_dssp CCTTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSE
T ss_pred CCCCeEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcE
Confidence 3445699999999999999985 43322111 11235568999999999999999975 8
Q ss_pred EEEEeecCCchHHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCch-hHhhhcc
Q 023130 122 YFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDE-DLEVVKK 200 (287)
Q Consensus 122 ~lig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~-~~~~l~~ 200 (287)
.|+|+||+|.+|+++++.|++.||+++++...+ +.+|+.|+++++ +|+|+++++.|++..+.++++... ..+.++.
T Consensus 104 ~fiG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~--~~~T~~~~v~~~-dgert~~~~~ga~~~l~~~~i~~~~~~~~i~~ 180 (372)
T 3uq6_A 104 SYVGCIGADIQGKYIKNDCSALDLVTEFQIAEE--PLMTGKVAVLVS-EKLRSMVTYLGAACDLSLAHIEQPHVWSLVEK 180 (372)
T ss_dssp EEEEEECSSHHHHHHHHHHHHTTCEECCEECCT--TCCEEEEEEEEC-SSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHH
T ss_pred EEEeeecCCHHHHHHHHHHHHcCCCceeeeecC--CCCceEEEEEcC-CCceEEEEeccchhhcchhhhhhhhHHHHhhc
Confidence 999999999999999999999999999998887 778999999886 899999999998888777777543 4467889
Q ss_pred ccEEEEeCCCC---HHHHHHHHHHHHhCCCcEEEeCCCCC-----CCCchhhccCCcEEecCHHHHHhhcCCCCCCHHHH
Q 023130 201 AGIVLLQREIP---DSVNIQVAKAARSAGVPVIFDAGGMD-----APIPQELLNFIDILSPNESELGRLTGMPTDSYEQI 272 (287)
Q Consensus 201 a~~v~~~g~~~---~~~~~~~~~~a~~~g~~v~~D~~~~~-----~~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~ 272 (287)
++++++++... .+.+.++++.|+++|+++++|++... ++.+.++++++|++++|++|++.|++......++.
T Consensus 181 a~~~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~~~ 260 (372)
T 3uq6_A 181 AQVYYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTV 260 (372)
T ss_dssp CSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHH
T ss_pred ccEEEEecccccccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCchhHH
Confidence 99999998643 46678899999999999999998531 23356788999999999999999988644444455
Q ss_pred HHHHHHHhh
Q 023130 273 SEAVVKCHK 281 (287)
Q Consensus 273 ~~~~~~l~~ 281 (287)
.+.++.+.+
T Consensus 261 ~~~a~~l~~ 269 (372)
T 3uq6_A 261 HATARYIAD 269 (372)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 555555543
No 28
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=99.96 E-value=1.2e-28 Score=218.56 Aligned_cols=186 Identities=23% Similarity=0.277 Sum_probs=155.5
Q ss_pred CCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCC
Q 023130 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRL 147 (287)
Q Consensus 68 ~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~ 147 (287)
++|+|+|++++|++. |..++..+.......+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.||++
T Consensus 2 ~~i~viG~~~~D~~~-----~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~L~~~gv~~ 76 (309)
T 1v1a_A 2 LEVVTAGEPLVALVP-----QEPGHLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDL 76 (309)
T ss_dssp CSEEEESCCEEEEEC-----SSSSCGGGCCEEEEEEECHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHHTCBC
T ss_pred CcEEEEccceEEEec-----CCCCcccchheeeeecCcHHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCCC
Confidence 589999999999984 344445556677889999999999999999999999999999999999999999999999
Q ss_pred CceEEccCCCCCCceEEEEEcCCCCeeEEEeC--CCCCCCCCcccCchhHhhhccccEEEEeCCCC------HHHHHHHH
Q 023130 148 DYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVG--GTNMSCWPEKFGDEDLEVVKKAGIVLLQREIP------DSVNIQVA 219 (287)
Q Consensus 148 ~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~--ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~------~~~~~~~~ 219 (287)
+++.+.+ + +|+.+++.++++|+|++.++. ++...+.++++.. +.+.+++++|+++..+ .+.+.+++
T Consensus 77 ~~v~~~~--~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~ 150 (309)
T 1v1a_A 77 THFRRAP--G-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDP---DYLEGVRFLHLSGITPALSPEARAFSLWAM 150 (309)
T ss_dssp TTEEECS--S-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCG---GGGTTCSEEEEETTGGGSCHHHHHHHHHHH
T ss_pred ceEEEcC--C-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCCh---hHhcCCCEEEEeCchhccCchHHHHHHHHH
Confidence 9999888 7 999999999888999887665 3444455555543 4578899999988643 35678889
Q ss_pred HHHHhCCCcEEEeCCCCCCC--------CchhhccCCcEEecCHHHHHhhcCC
Q 023130 220 KAARSAGVPVIFDAGGMDAP--------IPQELLNFIDILSPNESELGRLTGM 264 (287)
Q Consensus 220 ~~a~~~g~~v~~D~~~~~~~--------~~~~ll~~~dil~~Ne~E~~~l~g~ 264 (287)
+.++++|+++++|++..... .+.++++++|++++|++|++.|+|.
T Consensus 151 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 203 (309)
T 1v1a_A 151 EEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGR 203 (309)
T ss_dssp HHHHTTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSS
T ss_pred HHHHHcCCEEEEeCCCCcccCCHHHHHHHHHHHHHhCCEEECcHHHHHHHhCC
Confidence 99999999999999864322 2356789999999999999999985
No 29
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=99.96 E-value=5.8e-29 Score=222.28 Aligned_cols=206 Identities=19% Similarity=0.282 Sum_probs=159.9
Q ss_pred CCCCEEEECCceeeeEee--------cCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHH
Q 023130 66 TPPPLVVVGSANFDIYVE--------IDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137 (287)
Q Consensus 66 ~~~~IlviG~~~iD~~~~--------vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~ 137 (287)
++++|+|+|++++|++.. ++.+|. ......+||+++|+|+++++||.++.++|.+|+|.+|++++
T Consensus 4 ~~~~v~~iG~~~~D~~~~~~~~~~~~~~~~p~-------~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~ 76 (325)
T 3h49_A 4 DNLDVICIGAAIVDIPLQPVSKNIFDVDSYPL-------ERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFIL 76 (325)
T ss_dssp -CEEEEEESCCEEEEEECSCCGGGGGSSCCCC-------SCCCCEEESHHHHHHHHHHHTTCEEEEECEEESSHHHHHHH
T ss_pred CCCeEEEEChhhheeeccCCCCccccccccch-------heeEEccCcHHHHHHHHHHHCCCCeEEEEEECCChHHHHHH
Confidence 457899999999999743 333432 35678999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCC-CCCCCcccCchhHhhhccccEEEEeCCC-----C
Q 023130 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTN-MSCWPEKFGDEDLEVVKKAGIVLLQREI-----P 211 (287)
Q Consensus 138 ~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~-~~~~~~~l~~~~~~~l~~a~~v~~~g~~-----~ 211 (287)
+.|++.||+++++.+.+ +.+|+.++++++++|+|+++++.+.. ..+..+++. .+.+..++++++++.. +
T Consensus 77 ~~L~~~gV~~~~v~~~~--~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~ 151 (325)
T 3h49_A 77 DHCRKENIDIQSLKQDV--SIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVD---FARFSQAKLLSLASIFNSPLLD 151 (325)
T ss_dssp HHHHHHTCBCSSCEEET--TSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCC---GGGGGGCSEEEEEEETTSTTSC
T ss_pred HHHHHcCCceeeEEecC--CCCCceEEEEECCCCceeEEeccCcccccCChhhcC---hhhhccCCEEEEecccCCcccC
Confidence 99999999999998887 77999999999999999998776543 233444443 2567889999998732 3
Q ss_pred HHHHHHHHHHHHhCCCcEEEeCCCCCC--C---CchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhhhcccC
Q 023130 212 DSVNIQVAKAARSAGVPVIFDAGGMDA--P---IPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMVSVG 286 (287)
Q Consensus 212 ~~~~~~~~~~a~~~g~~v~~D~~~~~~--~---~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~v~v~ 286 (287)
.+.+.++++.+++++ .+++|++.... . .+.++++++|++++|++|++.|+|. .+.+++.+.+.+...+.+|.
T Consensus 152 ~~~~~~~~~~a~~~~-~~~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~--~~~~~~~~~l~~~g~~~vvv 228 (325)
T 3h49_A 152 GKALTEIFTQAKARQ-MIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGK--ETLDEIADCFLACGVKTVVI 228 (325)
T ss_dssp HHHHHHHHHHHHHTT-CEEEEEECCCSSCCCHHHHHHHHTTCSEEECBHHHHHHHHTC--SSHHHHHHHHHTTTCSEEEE
T ss_pred HHHHHHHHHHHHhcC-CEEEecCCchhhhhHHHHHHHHHhhCCEEecCHHHHHHHhCC--CCHHHHHHHHHHcCCCEEEE
Confidence 467889999999998 57777643321 1 1356889999999999999999995 45666555544444344443
No 30
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=99.96 E-value=1.5e-29 Score=226.22 Aligned_cols=194 Identities=19% Similarity=0.250 Sum_probs=163.3
Q ss_pred CEEEECCceeeeEeec----------CCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecC-CchHHHHH
Q 023130 69 PLVVVGSANFDIYVEI----------DRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE-DANGKLIT 137 (287)
Q Consensus 69 ~IlviG~~~iD~~~~v----------d~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~-D~~G~~i~ 137 (287)
+|+|+|++++|+++.+ +++|..+++..+......+||+++|+|+++++||.++.++|.+|+ | +|+ ++
T Consensus 2 ~i~v~G~~~iD~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~~D-~g~-i~ 79 (326)
T 3b1n_A 2 ATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALNLLGGDARMMGTLGAVD-AQP-YL 79 (326)
T ss_dssp CEEEESCCEEEEEEECSSCGGGGCCTTSSSSCEEEEECCSCCCEEECHHHHHHHHHHHTTCCEEEEEEEETTT-CHH-HH
T ss_pred cEEEECcceEEEEEecchhhhhhccccccCCCCcceecccceeccCCHHHHHHHHHHHcCCCeeEEEEECCcC-HHH-HH
Confidence 6999999999999999 889999998888889999999999999999999999999999999 9 899 99
Q ss_pred HHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccccEEEEeCCCCHHHHHH
Q 023130 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQ 217 (287)
Q Consensus 138 ~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~~~~~~~ 217 (287)
+.|++.||+++++.+.+ +.+|+.++++++++|++.+.++++++..+.++++. + ...++++++++.. ++.+.+
T Consensus 80 ~~L~~~gVd~~~v~~~~--~~~T~~~~v~~~~~g~~~~~~~~ga~~~~~~~~~~----~-~~~~~~v~~~~~~-~~~~~~ 151 (326)
T 3b1n_A 80 DRMDALGLSREYVRVLP--DTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAG----E-AKDIKLAIVGPDG-FQGMVQ 151 (326)
T ss_dssp HHHHHHTCEEEEEEEET--TCCCEEEEEEECTTCCCEEEEECGGGGGGGGSCGG----G-CCSCSEEEECSCC-HHHHHH
T ss_pred HHHHHcCCcccceEEcC--CCCceEEEEEECCCCceEEEEecChhhhcChhhcc----c-ccCCCEEEECCcc-HHHHHH
Confidence 99999999999998877 67999999999988999887777765444333332 1 2789999998765 456888
Q ss_pred HHHHHHhCCCcEEEeCCCCCC----CCchhhccCCcEEecCHHHHHhhcCCCCCCHHHH
Q 023130 218 VAKAARSAGVPVIFDAGGMDA----PIPQELLNFIDILSPNESELGRLTGMPTDSYEQI 272 (287)
Q Consensus 218 ~~~~a~~~g~~v~~D~~~~~~----~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~ 272 (287)
+++.+++.|+++++|++.... +.+.++++++|++++|++|++.|+|....+.+++
T Consensus 152 ~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~l 210 (326)
T 3b1n_A 152 HTEELAQAGVPFIFDPGQGLPLFDGATLRRSIELATYIAVNDYEAKLVCDKTGWSEDEI 210 (326)
T ss_dssp HHHHHHHHTCCEEECCGGGGGGCCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCCHHHH
T ss_pred HHHHHHHCCCEEEEeCchhhhhccHHHHHHHHHhCCEEecCHHHHHHHhCCCCCCHHHH
Confidence 999999999999999985421 2245788899999999999999988543344443
No 31
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.96 E-value=2.2e-29 Score=225.55 Aligned_cols=206 Identities=17% Similarity=0.243 Sum_probs=169.8
Q ss_pred CCCCEEEECCceeeeEeecCCCCCCCcEEEe---cCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHh
Q 023130 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAA---KTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSG 142 (287)
Q Consensus 66 ~~~~IlviG~~~iD~~~~vd~~P~~~~~~~~---~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~ 142 (287)
..+.++|+|++++|+++.+++ |.+++++++ ......+||+++|+|+++++||.++.++|.+|+| +|+++++.|++
T Consensus 11 ~~~~~~v~G~~~vD~~~~~~~-~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~d-~G~~i~~~L~~ 88 (331)
T 2ajr_A 11 HHMVLTVTLNPALDREIFIED-FQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGFVGGY-MGKILVEELRK 88 (331)
T ss_dssp -CCEEEEESSCEEEEEEECTT-CCSSCEEECCSGGGEEEEEESHHHHHHHHHHHTTCCEEEEEEEEHH-HHHHHHHHHHH
T ss_pred cceEEEEecchHHeEEEEcCC-ccCCceEEeccccceEEecCcHHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHH
Confidence 346799999999999999999 789999998 8999999999999999999999999999999998 99999999999
Q ss_pred CC--CCCCceEEccCCCCCCceEEEEEcCCCCe-eEEEeCCCCCCCCCcccCch---hHhhhccccEEEEeCCCCH----
Q 023130 143 CG--VRLDYMNVVKDGGVPTGHAVVMLQSDGQN-SIIIVGGTNMSCWPEKFGDE---DLEVVKKAGIVLLQREIPD---- 212 (287)
Q Consensus 143 ~g--Vd~~~v~~~~~~~~~T~~~~v~i~~~Ger-~~~~~~ga~~~~~~~~l~~~---~~~~l~~a~~v~~~g~~~~---- 212 (287)
.| |+++++.+.+ .|+.++++++++|+| +++...++. +.++++... ..+.+..++++++++.++.
T Consensus 89 ~g~~V~~~~v~~~~----~t~~~~~~v~~~g~~~~~~~~~g~~--l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 162 (331)
T 2ajr_A 89 ISKLITTNFVYVEG----ETRENIEIIDEKNKTITAINFPGPD--VTDMDVNHFLRRYKMTLSKVDCVVISGSIPPGVNE 162 (331)
T ss_dssp HCTTEEEEEEEESS----CCEEEEEEEETTTTEEEEEECCCCC--CCHHHHHHHHHHHHHHHTTCSEEEEESCCCTTSCT
T ss_pred cCCccceEEEEcCC----CCeEEEEEEeCCCceEEEEeCCCCC--CCHHHHHHHHHHHHHhcccCCEEEEECCCCCCCCH
Confidence 99 9999988765 589999999888998 666555553 333333211 1234678999999987653
Q ss_pred HHHHHHHHHHHhCCCcEEEeCCCCCCCCchhhccC---CcEEecCHHH-HHhhcCCCCCCHHHHHHHHHHHhhh
Q 023130 213 SVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF---IDILSPNESE-LGRLTGMPTDSYEQISEAVVKCHKM 282 (287)
Q Consensus 213 ~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~ll~~---~dil~~Ne~E-~~~l~g~~~~~~~~~~~~~~~l~~~ 282 (287)
+.+.++++.++++|+++++|+++. .+.+++++ +|++++|++| ++.|+|.+..+.+++.+++++|.++
T Consensus 163 ~~~~~~~~~a~~~g~~v~~D~~~~---~~~~~l~~~~~~dil~~N~~E~~~~l~g~~~~~~~~~~~~~~~l~~~ 233 (331)
T 2ajr_A 163 GICNELVRLARERGVFVFVEQTPR---LLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLAEK 233 (331)
T ss_dssp THHHHHHHHHHHTTCEEEEECCHH---HHHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECChH---HHHHHHhcCCCCeEEEeCccchHHHHhCCCCCCHHHHHHHHHHHHHh
Confidence 678899999999999999999852 24555554 9999999999 9999997666677777777777654
No 32
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=99.96 E-value=8e-29 Score=223.51 Aligned_cols=204 Identities=15% Similarity=0.133 Sum_probs=152.8
Q ss_pred CCCCCEEEECCceeeeEeecCCCCCCCc-EEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhC
Q 023130 65 NTPPPLVVVGSANFDIYVEIDRLPKVGE-TVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGC 143 (287)
Q Consensus 65 ~~~~~IlviG~~~iD~~~~vd~~P~~~~-~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~ 143 (287)
++|++|+++|++++|+. |..+. ...+..+...+||+++|+|++++|||.++.++|+||+|.+|+++++.|++.
T Consensus 22 ~mm~kv~~~GE~m~~l~------p~~~~~~~~~~~~~~~~GG~~aNvA~~larLG~~~~~ig~vG~D~~G~~l~~~L~~~ 95 (351)
T 4gm6_A 22 SMMKQVVTIGELLMRLS------TQQGIPFSQTTALDIHIGGAEANVAVNLSKLGHPTRIATVVPANPIGKMAVEHLWRH 95 (351)
T ss_dssp ---CEEEEECCCEEEEE------CCTTCCGGGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHT
T ss_pred hccCCEEEEcceeEEec------CCCCCCccccCeEEEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHc
Confidence 46679999999999987 44333 234566788999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCC--CCCCcccCchhHhhhccccEEEEeCCC------CHHHH
Q 023130 144 GVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM--SCWPEKFGDEDLEVVKKAGIVLLQREI------PDSVN 215 (287)
Q Consensus 144 gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~--~~~~~~l~~~~~~~l~~a~~v~~~g~~------~~~~~ 215 (287)
|||++++.+.+ +.+|+.++...+..+++.+.+++.... .....++ ...+.++.++++|+++.. +.+++
T Consensus 96 GVdt~~v~~~~--~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~--~~~~~~~~~~~~~~~g~~l~~~~~~~~~~ 171 (351)
T 4gm6_A 96 QVDTAFVVEAG--DRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDW--DLSELLKGIRVLHVSGITIALSTFWLEMV 171 (351)
T ss_dssp TEECTTEEECS--SCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCC--CHHHHHTTEEEEEEEHHHHHHCHHHHHHH
T ss_pred CCCcccccccC--CccceeEEEEccCCcceEEEEccccchhhhCCcccc--CHHHHHhhcccceecccchhhchhHHHHH
Confidence 99999999887 655555555555556666665544321 1122222 233568899999998632 23678
Q ss_pred HHHHHHHHhCCCcEEEeCCCCCCCC--------chhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHH
Q 023130 216 IQVAKAARSAGVPVIFDAGGMDAPI--------PQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKC 279 (287)
Q Consensus 216 ~~~~~~a~~~g~~v~~D~~~~~~~~--------~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l 279 (287)
.++++.|+++|++|+||++.+..-| +.++++++|++++|++|++.|+|...+. ++..++..+.
T Consensus 172 ~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~-~~~~~~~~~~ 242 (351)
T 4gm6_A 172 VKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSET-TDYYQAMHDK 242 (351)
T ss_dssp HHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTC-SCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHHHhCCccccCHHHHHHHhCCCCch-hHHHHHHHhh
Confidence 8999999999999999999764322 3568899999999999999999975333 3344444443
No 33
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=99.96 E-value=9.9e-29 Score=225.62 Aligned_cols=210 Identities=18% Similarity=0.230 Sum_probs=169.8
Q ss_pred CCCCCEEEECCceeeeEeecCC-C-----CCCCcEEE-------------ecCceeecCchHHHHHHHHHHc---CCCcE
Q 023130 65 NTPPPLVVVGSANFDIYVEIDR-L-----PKVGETVA-------------AKTSQTLAGGKGANQAACGAKL---SHPTY 122 (287)
Q Consensus 65 ~~~~~IlviG~~~iD~~~~vd~-~-----P~~~~~~~-------------~~~~~~~~GG~a~N~A~~la~L---G~~~~ 122 (287)
+++++|+|+|++++|+++.+++ + |.+++.+. .......+||+++|+|+++++| |.++.
T Consensus 30 ~~~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~GG~~~NvA~~la~Lg~~g~~v~ 109 (383)
T 2abs_A 30 TGPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAG 109 (383)
T ss_dssp CCCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEE
T ss_pred CCCceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhhccccceeeCCChHHHHHHHHHHhccCCCcEE
Confidence 3456899999999999999987 4 67777764 3467889999999999999999 89999
Q ss_pred EEEeecCCchHHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhcccc
Q 023130 123 FVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAG 202 (287)
Q Consensus 123 lig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~ 202 (287)
|+|.||+|.+|+++++.|++.||+++++.. + +.+|+.++++++ +|+|+++.+.+++..+.++ +...+.+..++
T Consensus 110 ~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~-~--~~~T~~~~~~~~-~g~r~~~~~~~a~~~l~~~---~~~~~~l~~~~ 182 (383)
T 2abs_A 110 YMGAIGDDPRGQVLKELCDKEGLATRFMVA-P--GQSTGVCAVLIN-EKERTLCTHLGACGSFRLP---EDWTTFASGAL 182 (383)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEEEEEC-T--TCCCEEEEEEEE-TTEEEEEEECGGGGGCCCC---TTHHHHTTTCC
T ss_pred EEEEecCChhHHHHHHHHHHcCCceeeeec-C--CCCCeEEEEEEc-CCceeEeeccChhhhCChh---hhhHHHhhcCC
Confidence 999999999999999999999999998874 4 569999999997 7899888888776555443 22345688999
Q ss_pred EEEEeCC---CCHHHHHHHHHHHHh-CCCcEEEeCCCCC-----CCCchhhccCCcEEecCHHHHHhhcCCC-CC---C-
Q 023130 203 IVLLQRE---IPDSVNIQVAKAARS-AGVPVIFDAGGMD-----APIPQELLNFIDILSPNESELGRLTGMP-TD---S- 268 (287)
Q Consensus 203 ~v~~~g~---~~~~~~~~~~~~a~~-~g~~v~~D~~~~~-----~~~~~~ll~~~dil~~Ne~E~~~l~g~~-~~---~- 268 (287)
++++++. .+.+.+.++++.+++ .|+++++|+.... .+.+.++++++|++++|++|++.|+|.. .. +
T Consensus 183 ~v~~~g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~~ 262 (383)
T 2abs_A 183 IFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKT 262 (383)
T ss_dssp EEEEEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC-----
T ss_pred EEEEeeecccCCHHHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCccccccc
Confidence 9999863 456788999999999 9999999997431 1234568899999999999999998743 11 1
Q ss_pred -------HHHHHHHHHHHhh
Q 023130 269 -------YEQISEAVVKCHK 281 (287)
Q Consensus 269 -------~~~~~~~~~~l~~ 281 (287)
.+++.+++++|.+
T Consensus 263 ~~s~~~~~~~~~~~a~~l~~ 282 (383)
T 2abs_A 263 ALSTANKEHAVEVCTGALRL 282 (383)
T ss_dssp -----CHHHHHHHHHHHHHH
T ss_pred ccccccccccHHHHHHHHHh
Confidence 4566777777664
No 34
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.96 E-value=2e-28 Score=217.12 Aligned_cols=204 Identities=17% Similarity=0.215 Sum_probs=163.7
Q ss_pred CCEEEE-CCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCC
Q 023130 68 PPLVVV-GSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVR 146 (287)
Q Consensus 68 ~~Ilvi-G~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd 146 (287)
+.|+++ |++++|+++.+++ |.+|++++.......+||+++|+|+++++||.++.++|.+|+| +|+++++.|++.||+
T Consensus 2 ~~I~~v~g~~~~D~~~~~~~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~ 79 (309)
T 3cqd_A 2 VRIYTLTLAPSLDSATITPQ-IYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVP 79 (309)
T ss_dssp CCEEEECSSCEEEEEEEESC-CCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTCC
T ss_pred ceEEEEeccchheEEEEcCC-CcCCCeeeccceeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCC
Confidence 357755 6999999999999 6899999999999999999999999999999999999999998 999999999999999
Q ss_pred CCceEEccCCCCCCceEEEE-EcCCCCeeEEEeCCCCCCCCCcccCc---hhHhhhccccEEEEeCCCC----HHHHHHH
Q 023130 147 LDYMNVVKDGGVPTGHAVVM-LQSDGQNSIIIVGGTNMSCWPEKFGD---EDLEVVKKAGIVLLQREIP----DSVNIQV 218 (287)
Q Consensus 147 ~~~v~~~~~~~~~T~~~~v~-i~~~Ger~~~~~~ga~~~~~~~~l~~---~~~~~l~~a~~v~~~g~~~----~~~~~~~ 218 (287)
++++.+.+ .|+.++++ ++++|+++++...++. ++++++.. ...+.++. +++++++.++ .+.+.++
T Consensus 80 ~~~v~~~~----~t~~~~~~~~~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~~ 152 (309)
T 3cqd_A 80 VATVEAKD----WTRQNLHVHVEASGEQYRFVMPGAA--LNEDEFRQLEEQVLEIESG-AILVISGSLPPGVKLEKLTQL 152 (309)
T ss_dssp EEEEECSS----CCCCCEEEEETTTCCEEEEECCCCC--CCHHHHHHHHHHHHTSCTT-CEEEEESCCCTTCCHHHHHHH
T ss_pred ceeEEcCC----CCeeEEEEEEcCCCCEEEEEcCCCC--CCHHHHHHHHHHHHHhhcC-CEEEEECCCCCCCCHHHHHHH
Confidence 99987654 47777888 8888998777666653 33333321 11234677 9999998765 4678889
Q ss_pred HHHHHhCCCcEEEeCCCCCCCCchhhccCC-cEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhhh
Q 023130 219 AKAARSAGVPVIFDAGGMDAPIPQELLNFI-DILSPNESELGRLTGMPTDSYEQISEAVVKCHKM 282 (287)
Q Consensus 219 ~~~a~~~g~~v~~D~~~~~~~~~~~ll~~~-dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~ 282 (287)
++.++++|+++++|+++. .+.+.+.+.+ |++++|++|++.|+|.+..+.+++.+++++|.++
T Consensus 153 ~~~a~~~g~~v~~D~~~~--~~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~ 215 (309)
T 3cqd_A 153 ISAAQKQGIRCIVDSSGE--ALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNS 215 (309)
T ss_dssp HHHHHTTTCEEEEECCHH--HHHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHT
T ss_pred HHHHHHcCCeEEEECChH--HHHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHHHHHHHHHHc
Confidence 999999999999999753 2222244788 9999999999999997655556666667666543
No 35
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=99.96 E-value=2.1e-28 Score=219.07 Aligned_cols=207 Identities=20% Similarity=0.291 Sum_probs=160.9
Q ss_pred CCCCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCC
Q 023130 65 NTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCG 144 (287)
Q Consensus 65 ~~~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~g 144 (287)
+++++|+|+|++++|++......|.. ........+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.|
T Consensus 9 ~~~~~i~viG~~~~D~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~g 84 (332)
T 2qcv_A 9 DREFDLIAIGRACIDLNAVEYNRPME----ETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIESYMRGVG 84 (332)
T ss_dssp CCSEEEEEESCCEEEEEESSCSSCGG----GCCCEEEEEESHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTT
T ss_pred ccCCcEEEECcceEEEecCCCCCCcc----ccceeEecCCCHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcC
Confidence 34568999999999999876555421 23567789999999999999999999999999999999999999999999
Q ss_pred CCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCC--CCCCCCCcccCchhHhhhccccEEEEeCCC-----CHHHHHH
Q 023130 145 VRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGG--TNMSCWPEKFGDEDLEVVKKAGIVLLQREI-----PDSVNIQ 217 (287)
Q Consensus 145 Vd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~g--a~~~~~~~~l~~~~~~~l~~a~~v~~~g~~-----~~~~~~~ 217 (287)
|+++++.+.+. ..+|+.+++.++.+|++++.++.. ++..+.++++.. ..+++++++|+++.. +.+.+.+
T Consensus 85 V~~~~v~~~~~-~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~---~~~~~~~~v~~~g~~~~~~~~~~~~~~ 160 (332)
T 2qcv_A 85 VDTSNLVVDQE-GHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNE---AYIRRSKLLLVSGTALSKSPSREAVLK 160 (332)
T ss_dssp CBCTTEEECSS-CCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCH---HHHTTEEEEEEEGGGGSSTTHHHHHHH
T ss_pred CCCcceEecCC-CCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCH---HHHccCCEEEEeCccccCchhHHHHHH
Confidence 99999987641 258999999877778888777664 343444455532 356789999998753 2367888
Q ss_pred HHHHHHhCCCcEEEeCCCCCCC---------CchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhh
Q 023130 218 VAKAARSAGVPVIFDAGGMDAP---------IPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHK 281 (287)
Q Consensus 218 ~~~~a~~~g~~v~~D~~~~~~~---------~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~ 281 (287)
+++.++++|+++++|++..... ...++++++|++++|++|++.|+|.... ++..+++++|.+
T Consensus 161 ~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~--~~~~~~~~~l~~ 231 (332)
T 2qcv_A 161 AIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTEK--GDNDETIRYLFK 231 (332)
T ss_dssp HHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCSSC--CCHHHHHHHHTT
T ss_pred HHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCcC--CCHHHHHHHHHH
Confidence 9999999999999999864211 2355788999999999999999996421 123445555554
No 36
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.96 E-value=2.3e-28 Score=218.20 Aligned_cols=203 Identities=20% Similarity=0.276 Sum_probs=166.0
Q ss_pred CCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCC
Q 023130 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRL 147 (287)
Q Consensus 68 ~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~ 147 (287)
+.++|+|++++|+++.+++ |..|++++.......+||+++|+|+++++||.++.++|.+|+ .+|+++++.|++.||++
T Consensus 3 m~i~v~g~~~~D~~~~v~~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~-~~G~~i~~~L~~~gV~~ 80 (323)
T 2f02_A 3 LIVTVTMNPSIDISYLLDH-LKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGG-FHGAFIANELKKANIPQ 80 (323)
T ss_dssp CEEEEESSCEEEEEEECSC-CCTTSEEEESCEEEEEESHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTCCB
T ss_pred eEEEEecCceeEEEEecCC-cccCCEEEeceEEEcCCcHHHHHHHHHHHcCCCeEEEEEecc-chHHHHHHHHHHCCCce
Confidence 5799999999999999999 799999999999999999999999999999999999999997 59999999999999999
Q ss_pred CceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCc---hhHhhhccccEEEEeCCCCH----HHHHHHHH
Q 023130 148 DYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGD---EDLEVVKKAGIVLLQREIPD----SVNIQVAK 220 (287)
Q Consensus 148 ~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~---~~~~~l~~a~~v~~~g~~~~----~~~~~~~~ 220 (287)
+++.+.+ .|+.++++++++ +++++...++. ++++++.. ...+.++.++++++++.++. +.+.++++
T Consensus 81 ~~v~~~~----~t~~~~~~~~~~-~~~~~~~~g~~--l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~ 153 (323)
T 2f02_A 81 AFTSIKE----ETRDSIAILHEG-NQTEILEAGPT--VSPEEISNFLENFDQLIKQAEIVTISGSLAKGLPSDFYQELVQ 153 (323)
T ss_dssp CCEEESS----CCEEEEEEEETT-EEEEEEECCCB--CCHHHHHHHHHHHHHHHTTCSEEEEESCCCBTSCTTHHHHHHH
T ss_pred eEEEcCC----CCeeEEEEEcCC-CeEEEECCCCC--CCHHHHHHHHHHHHHhccCCCEEEEECCCCCCCChHHHHHHHH
Confidence 9988765 588888888876 77776666653 33333321 11134678999999887653 67889999
Q ss_pred HHHhCCCcEEEeCCCCCCCCchhhc---cCCcEEecCHHHHHhhcCCCCC-CH-HHHHHHHHHHhhh
Q 023130 221 AARSAGVPVIFDAGGMDAPIPQELL---NFIDILSPNESELGRLTGMPTD-SY-EQISEAVVKCHKM 282 (287)
Q Consensus 221 ~a~~~g~~v~~D~~~~~~~~~~~ll---~~~dil~~Ne~E~~~l~g~~~~-~~-~~~~~~~~~l~~~ 282 (287)
.+++.|+++++||++. .+.+++ +++|++++|++|++.|+|.+.. +. +++.+++++|.++
T Consensus 154 ~a~~~g~~v~~Dp~~~---~~~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~l~~~ 217 (323)
T 2f02_A 154 KAHAQEVKVLLDTSGD---SLRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFA 217 (323)
T ss_dssp HHHHTTCEEEEECCTH---HHHHHHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHHTSGGGT
T ss_pred HHHHCCCEEEEECChH---HHHHHHhccCCCeEEecCHHHHHHHhCCCCCCCcHHHHHHHHHHHHHc
Confidence 9999999999999853 244555 5899999999999999997543 44 6677777777654
No 37
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.96 E-value=3.2e-28 Score=218.01 Aligned_cols=203 Identities=24% Similarity=0.350 Sum_probs=166.6
Q ss_pred CCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCC
Q 023130 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRL 147 (287)
Q Consensus 68 ~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~ 147 (287)
+.++|+|++++|+++.++++ ..|++.++......+||+++|+|+++++||.++.++|.+|+ .+|+++++.|++.||++
T Consensus 21 Mi~~v~G~~~~D~~~~~~~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~-~~G~~l~~~L~~~gV~~ 98 (330)
T 2jg1_A 21 MILTLTLNPSVDISYPLTAL-KLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGG-ELGQFIAKKLDHADIKH 98 (330)
T ss_dssp CEEEEESSCEEEEEEEESCC-CTTSEEEESCCEEEEECHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTCEE
T ss_pred EEEEEecchhheEEEecCCc-cCCceEEeceEEEcCCchHHHHHHHHHHhCCCeEEEEEecc-hhHHHHHHHHHHCCCce
Confidence 46778899999999999997 88999999999999999999999999999999999999996 69999999999999999
Q ss_pred CceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCc---hhHhhhccccEEEEeCCCC----HHHHHHHHH
Q 023130 148 DYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGD---EDLEVVKKAGIVLLQREIP----DSVNIQVAK 220 (287)
Q Consensus 148 ~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~---~~~~~l~~a~~v~~~g~~~----~~~~~~~~~ 220 (287)
+++.+.+ .|+.++++++++ +++++...++. ++++++.. ...+.+..++++++++.++ .+.+.++++
T Consensus 99 ~~v~~~~----~t~~~~~~v~~~-~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~ 171 (330)
T 2jg1_A 99 AFYNIKG----ETRNCIAILHEG-QQTEILEQGPE--IDNQEAAGFIKHFEQMMEKVEAVAISGSLPKGLNQDYYAQIIE 171 (330)
T ss_dssp CCEEESS----CCEEEEEEEETT-EEEEEEECCCB--CCHHHHHHHHHHHHHHGGGCSEEEEESCCCBTSCTTHHHHHHH
T ss_pred eEEEccC----CCeeEEEEEeCC-CcEEEECCCCC--CCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCCCHHHHHHHHH
Confidence 9988765 589999999866 77766666653 33333321 1113468899999988765 367889999
Q ss_pred HHHhCCCcEEEeCCCCCCCCchhhcc---CCcEEecCHHHHHhhcCCCCC-CHHHHHHHHHHHhhh
Q 023130 221 AARSAGVPVIFDAGGMDAPIPQELLN---FIDILSPNESELGRLTGMPTD-SYEQISEAVVKCHKM 282 (287)
Q Consensus 221 ~a~~~g~~v~~D~~~~~~~~~~~ll~---~~dil~~Ne~E~~~l~g~~~~-~~~~~~~~~~~l~~~ 282 (287)
.|+++|+++++|+++. .+.++++ ++|++++|++|++.|+|.+.. +.+++.+++++|.++
T Consensus 172 ~a~~~g~~v~~D~~~~---~l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~l~~~ 234 (330)
T 2jg1_A 172 RCQNKGVPVILDCSGA---TLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFE 234 (330)
T ss_dssp HHHTTTCCEEEECCHH---HHHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHHHHHHSGGGT
T ss_pred HHHHCCCEEEEECCcH---HHHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHc
Confidence 9999999999999752 3455665 899999999999999997544 667787788877664
No 38
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=99.96 E-value=1.9e-28 Score=217.68 Aligned_cols=203 Identities=13% Similarity=0.104 Sum_probs=157.6
Q ss_pred CCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCC
Q 023130 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRL 147 (287)
Q Consensus 68 ~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~ 147 (287)
++|+|+|++++|++. |..++..+.......+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.||++
T Consensus 2 ~~v~viG~~~~D~~~-----~~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~~~~~l~~~gv~~ 76 (313)
T 2v78_A 2 VDVIALGEPLIQFNS-----FNPGPLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGIDT 76 (313)
T ss_dssp CCEEEECCCEEEEEE-----SSSSCGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTCBC
T ss_pred CeEEEECcceEEEec-----CCCCcccccceeEecCCChHHHHHHHHHHCCCcEEEEEEeCCCHHHHHHHHHHHHcCCcC
Confidence 479999999999985 445555566677899999999999999999999999999999999999999999999999
Q ss_pred CceEEccCCCCCCceEEEE--EcCCCCeeEEEeC--CCCCCCCCcccCchhHhhhccccEEEEeCCCC------HHHHHH
Q 023130 148 DYMNVVKDGGVPTGHAVVM--LQSDGQNSIIIVG--GTNMSCWPEKFGDEDLEVVKKAGIVLLQREIP------DSVNIQ 217 (287)
Q Consensus 148 ~~v~~~~~~~~~T~~~~v~--i~~~Ger~~~~~~--ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~------~~~~~~ 217 (287)
+++.+.+ +.+|+.+++. ++++|+|++.++. +++..++++++.. +.+++++++|+++..+ .+.+.+
T Consensus 77 ~~v~~~~--~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~---~~~~~~~~v~~~g~~~~~~~~~~~~~~~ 151 (313)
T 2v78_A 77 SHIKVDN--ESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINE---NYVRNSRLVHSTGITLAISDNAKEAVIK 151 (313)
T ss_dssp TTEEEET--TSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCH---HHHHTSSEEEEEHHHHHHCHHHHHHHHH
T ss_pred ceEEEcC--CCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCH---HHhcCCCEEEEcCchhhcChHHHHHHHH
Confidence 9999877 6799999998 8888999887765 4445555555543 4578899999987533 245566
Q ss_pred HHHHHHhCCCcEEEeCCCCCC---------CCchhhccCCc--EEecCHHHHHhhcCCCCCCHHHHHHHHHHHhhhcccC
Q 023130 218 VAKAARSAGVPVIFDAGGMDA---------PIPQELLNFID--ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMVSVG 286 (287)
Q Consensus 218 ~~~~a~~~g~~v~~D~~~~~~---------~~~~~ll~~~d--il~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~v~v~ 286 (287)
+++.++++ ++|++.... +.+.++++++| ++++|++|++.|+|. .+.+++.+.+.++..+.+|.
T Consensus 152 ~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g~--~~~~~~~~~l~~~g~~~vvv 225 (313)
T 2v78_A 152 AFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDV--TDPDEAYRKYKELGVKVLLY 225 (313)
T ss_dssp HHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHSC--CCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhCC--CCHHHHHHHHHhCCCCEEEE
Confidence 66666543 899986421 12456788999 999999999999995 45655554444443334443
No 39
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.96 E-value=3.3e-28 Score=219.78 Aligned_cols=208 Identities=21% Similarity=0.218 Sum_probs=161.2
Q ss_pred CCCCCCEEEECCceeeeEee--cCCC-CC-CCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHH
Q 023130 64 INTPPPLVVVGSANFDIYVE--IDRL-PK-VGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDA 139 (287)
Q Consensus 64 ~~~~~~IlviG~~~iD~~~~--vd~~-P~-~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~ 139 (287)
..++++|+|+|++++|+++. ++++ |. +...+.+......+||+ +|+|+++++||.++.++|.+|+|.+|+++++.
T Consensus 50 ~~~~~~ilvvG~~~~D~~~~g~v~r~~p~~p~~~~~~~~~~~~~GG~-~NvA~~la~LG~~v~~ig~vG~D~~G~~i~~~ 128 (352)
T 4e84_A 50 QLARSRVLVVGDVMLDRYWFGNVDRISPEAPVPVVHVQRQEERLGGA-ANVARNAVTLGGQAGLLCVVGCDEPGERIVEL 128 (352)
T ss_dssp HHTTCEEEEEECEEEEEEEEEEEEEECSSSSSEEEEEEEEEEEEEEH-HHHHHHHHHTTCEEEEEEEEESSHHHHHHHHH
T ss_pred hcCCCcEEEECccceEEEEeecccccCCCCCcceEEeeEEEEecChH-HHHHHHHHHcCCCEEEEEEeCCChhHHHHHHH
Confidence 45667899999999999986 5554 21 23356777888999998 89999999999999999999999999999999
Q ss_pred HHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCC-CCCCCCCcccCchhHhhhccccEEEEeCC--CCHHHHH
Q 023130 140 LSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGG-TNMSCWPEKFGDEDLEVVKKAGIVLLQRE--IPDSVNI 216 (287)
Q Consensus 140 L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~g-a~~~~~~~~l~~~~~~~l~~a~~v~~~g~--~~~~~~~ 216 (287)
|++.||++ .+.+.+ +.+|+.+++++++++++..+.+.+ ++.... ..+.+...+.+..++++++++. .+.+.+.
T Consensus 129 L~~~GV~~-~~~~~~--~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~v~~~g~~~~~~~~~~ 204 (352)
T 4e84_A 129 LGSSGVTP-HLERDP--ALPTTIKLRVLARQQQLLRVDFEAMPTHEVL-LAGLARFDVLLPQHDVVLMSDYAKGGLTHVT 204 (352)
T ss_dssp HTTTSCEE-EEEEET--TSCCCEEEEEEESSCEEEEEEECCCCCHHHH-HHHHHHHHHHGGGCSEEEEECCSSSSCSSHH
T ss_pred HHHcCCce-eeEECC--CCCCceEEEEEcCCceEEEEEcCCCCCHHHH-HHHHHHHHHhcccCCEEEEeCCCCCCHHHHH
Confidence 99999999 455566 669999999998766554444432 221111 1111223456889999999853 2333478
Q ss_pred HHHHHHHhCCCcEEEeCCCCCCCCchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhh
Q 023130 217 QVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHK 281 (287)
Q Consensus 217 ~~~~~a~~~g~~v~~D~~~~~~~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~ 281 (287)
++++.|+++|++|++|+++.. .++++++|+++||++|++.|+| ...+.+++.+++++|.+
T Consensus 205 ~~~~~a~~~g~~v~~D~~~~~----~~~l~~~dil~pN~~Ea~~l~g-~~~~~~~~~~~a~~l~~ 264 (352)
T 4e84_A 205 TMIEKARAAGKAVLVDPKGDD----WARYRGASLITPNRAELREVVG-QWKSEDDLRARVANLRA 264 (352)
T ss_dssp HHHHHHHHTTCEEEEECCSSC----CSTTTTCSEECCBHHHHHHHHC-CCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCEEEEECCCcc----hhhccCCcEEcCCHHHHHHHhC-CCCCHHHHHHHHHHHHH
Confidence 899999999999999998642 3578999999999999999999 45677888888887764
No 40
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.95 E-value=1.1e-28 Score=219.95 Aligned_cols=199 Identities=19% Similarity=0.194 Sum_probs=164.2
Q ss_pred CEEEECCceeee-EeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCC
Q 023130 69 PLVVVGSANFDI-YVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRL 147 (287)
Q Consensus 69 ~IlviG~~~iD~-~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~ 147 (287)
-+.|.+++++|+ ++.++++ ..|++.++......+||+++|+|+++++||.++.++|.+|+| +|+++++.|++.||++
T Consensus 4 i~tvt~np~iD~~~~~v~~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~ 81 (320)
T 3ie7_A 4 IYTITLNPAIDRLLFIRGEL-EKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHINH 81 (320)
T ss_dssp EEEEESSCEEEEEEEESSSC-CTTSCCCCSEEEEEEESHHHHHHHHHHHHTCCEEEEEEEEST-THHHHHHHHHHTTCCB
T ss_pred EEEEecchHHeeeEEEcCCc-cCCCeeEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCce
Confidence 467779999999 9999998 899999999999999999999999999999999999999999 9999999999999999
Q ss_pred CceEEccCCCCCCceEEEEEcCCCC--eeEEEeCCCCCCCCCcccCc---hhHhhhccccEEEEeCCCC----HHHHHHH
Q 023130 148 DYMNVVKDGGVPTGHAVVMLQSDGQ--NSIIIVGGTNMSCWPEKFGD---EDLEVVKKAGIVLLQREIP----DSVNIQV 218 (287)
Q Consensus 148 ~~v~~~~~~~~~T~~~~v~i~~~Ge--r~~~~~~ga~~~~~~~~l~~---~~~~~l~~a~~v~~~g~~~----~~~~~~~ 218 (287)
+++...+ + +|+.++++++ +|+ |+++...++ .+.++++.. ...+.+..+++++++|.++ .+.+.++
T Consensus 82 ~~v~~~~--~-~t~~~~~~~~-~g~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~ 155 (320)
T 3ie7_A 82 DFLVEAG--T-STRECFVVLS-DDTNGSTMIPEAGF--TVSQTNKDNLLKQIAKKVKKEDMVVIAGSPPPHYTLSDFKEL 155 (320)
T ss_dssp CCEEETT--C-CCEEEEEEEE-TTCSCCEEEECCCC--CCCHHHHHHHHHHHHHHCCTTCEEEEESCCCTTCCHHHHHHH
T ss_pred EEEEecC--C-CCceEEEEEE-CCCceeEEEeCCCC--CCCHHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHH
Confidence 9995655 5 8999999998 888 888776664 233333321 1225578899999988765 4778999
Q ss_pred HHHHHhCCCcEEEeCCCCCCCCchhhcc-CCcEEecCHHHHHhhcCCCCC-CHHHHHHHHHH
Q 023130 219 AKAARSAGVPVIFDAGGMDAPIPQELLN-FIDILSPNESELGRLTGMPTD-SYEQISEAVVK 278 (287)
Q Consensus 219 ~~~a~~~g~~v~~D~~~~~~~~~~~ll~-~~dil~~Ne~E~~~l~g~~~~-~~~~~~~~~~~ 278 (287)
++.++++|+++++|++.. .+.+++. ++|++++|++|++.|+|.+.. +.+++.+++++
T Consensus 156 ~~~a~~~g~~v~~D~~~~---~l~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~ 214 (320)
T 3ie7_A 156 LRTVKATGAFLGCDNSGE---YLNLAVEMGVDFIKPNEDEVIAILDEKTNSLEENIRTLAEK 214 (320)
T ss_dssp HHHHHHHTCEEEEECCHH---HHHHHHHHCCSEECCBTTGGGGGSCTTCCCHHHHHHHHTTT
T ss_pred HHHHHhcCCEEEEECChH---HHHHHHhcCCeEEeeCHHHHHHHhCCCcCCCHHHHHHHHhh
Confidence 999999999999999752 2344554 999999999999999997654 45566555544
No 41
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=99.95 E-value=5e-29 Score=224.03 Aligned_cols=182 Identities=22% Similarity=0.353 Sum_probs=141.4
Q ss_pred CCCCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCC
Q 023130 65 NTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCG 144 (287)
Q Consensus 65 ~~~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~g 144 (287)
++|++|+|+|++++|++... .......+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.|
T Consensus 22 ~~m~~ilviG~~~~D~~~~~-----------~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~g 90 (339)
T 1tyy_A 22 KAMNKVWVIGDASVDLVPEK-----------QNSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNG 90 (339)
T ss_dssp ---CCEEEESCCEEEEEECS-----------SSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTT
T ss_pred cccCCEEEECcceeEEeccC-----------CCceEEcCCCHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHHHHcC
Confidence 34568999999999999652 2345678999999999999999999999999999999999999999999
Q ss_pred CCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeC--CCCCCCCCcccCchhHhhhccccEEEEeCC-----CCHHHHHH
Q 023130 145 VRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVG--GTNMSCWPEKFGDEDLEVVKKAGIVLLQRE-----IPDSVNIQ 217 (287)
Q Consensus 145 Vd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~--ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~-----~~~~~~~~ 217 (287)
|+++++.+.+ +.+|+.+++.++++|+|++.++. +++..+.++ ..+.+..++++++++. .+.+.+.+
T Consensus 91 Vd~~~v~~~~--~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~-----~~~~l~~~~~v~~~~~~l~~~~~~~~~~~ 163 (339)
T 1tyy_A 91 VDVTFLRLDA--DLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQ-----DLPPFRQYEWFYFSSIGLTDRPAREACLE 163 (339)
T ss_dssp EECTTEEECT--TSCCCEEEEC-------CEEECCSSCGGGGCCGG-----GCCCCCTTCEEEEEHHHHSSHHHHHHHHH
T ss_pred CCchheEecC--CCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcc-----hhhHhccCCEEEEcchhhcCcccHHHHHH
Confidence 9999999877 77999999999888999887655 444333222 2345778999999763 22356788
Q ss_pred HHHHHHhCCCcEEEeCCCCCC---------CCchhhccCCcEEecCHHHHHhhcCC
Q 023130 218 VAKAARSAGVPVIFDAGGMDA---------PIPQELLNFIDILSPNESELGRLTGM 264 (287)
Q Consensus 218 ~~~~a~~~g~~v~~D~~~~~~---------~~~~~ll~~~dil~~Ne~E~~~l~g~ 264 (287)
+++.++++|+++++|++.... +.+.++++++|++++|++|++.|+|.
T Consensus 164 ~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~ 219 (339)
T 1tyy_A 164 GARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGA 219 (339)
T ss_dssp HHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCC
T ss_pred HHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC
Confidence 999999999999999986421 12356788999999999999999995
No 42
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=99.95 E-value=1.6e-28 Score=217.97 Aligned_cols=191 Identities=18% Similarity=0.172 Sum_probs=152.9
Q ss_pred CCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCC
Q 023130 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRL 147 (287)
Q Consensus 68 ~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~ 147 (287)
++|+|+|++++|++. |..++..+.......+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.||++
T Consensus 2 ~~v~viG~~~~D~~~-----~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~l~~~gv~~ 76 (311)
T 2dcn_A 2 AKLITLGEILIEFNA-----LSPGPLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDV 76 (311)
T ss_dssp CEEEEESCCEEEEEE-----SSSSCGGGCCEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCBC
T ss_pred CCEEEECCceEEEec-----CCCCcccccceeeecCCChHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCCCc
Confidence 579999999999986 455555666677889999999999999999999999999999999999999999999999
Q ss_pred CceEEccCCCCCCceEEEEEcCCCC--eeEEEeC--CCCCCCCCcccCchhHhhhccccEEEEeCCCC------HHHHHH
Q 023130 148 DYMNVVKDGGVPTGHAVVMLQSDGQ--NSIIIVG--GTNMSCWPEKFGDEDLEVVKKAGIVLLQREIP------DSVNIQ 217 (287)
Q Consensus 148 ~~v~~~~~~~~~T~~~~v~i~~~Ge--r~~~~~~--ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~------~~~~~~ 217 (287)
+++.+.+ +.+|+.+++.++++|+ |+++++. +++..+.++++.. +.+.+++++|+++..+ .+.+.+
T Consensus 77 ~~v~~~~--~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~~v~~~g~~~~~~~~~~~~~~~ 151 (311)
T 2dcn_A 77 SHMKIDP--SAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDE---EYVKSADLVHSSGITLAISSTAKEAVYK 151 (311)
T ss_dssp TTCEEET--TSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCH---HHHTTCSEEEEEHHHHHSCHHHHHHHHH
T ss_pred ceEEEcC--CCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcCh---HHHcCCCEEEEeCcccccChHHHHHHHH
Confidence 9998877 7799999999988898 8887665 4445555555543 4578899999987432 355666
Q ss_pred HHHHHHhCCCcEEEeCCCCCCC--------Cchhhcc--CCcEEecCHHHHHhhcCCCCCCHHHHHH
Q 023130 218 VAKAARSAGVPVIFDAGGMDAP--------IPQELLN--FIDILSPNESELGRLTGMPTDSYEQISE 274 (287)
Q Consensus 218 ~~~~a~~~g~~v~~D~~~~~~~--------~~~~ll~--~~dil~~Ne~E~~~l~g~~~~~~~~~~~ 274 (287)
+++.+++. ++|++..... .+.++++ ++|++++|++|++.|+|. .+.+++.+
T Consensus 152 ~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~--~~~~~~~~ 212 (311)
T 2dcn_A 152 AFEIASNR----SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILGE--SDPDKAAK 212 (311)
T ss_dssp HHHHCSSE----EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSC--CCHHHHHH
T ss_pred HHHHHHHh----CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCC--CCHHHHHH
Confidence 67766554 8999864222 2346888 999999999999999995 44554433
No 43
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=99.95 E-value=2e-28 Score=217.16 Aligned_cols=180 Identities=16% Similarity=0.180 Sum_probs=153.8
Q ss_pred CCCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCC
Q 023130 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGV 145 (287)
Q Consensus 66 ~~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gV 145 (287)
++++|+|+|++++|+++.++++| .++.+.+......+||+++|+|+++++||.++.++|.+|+| +|+++++.|++.||
T Consensus 19 ~~~~v~viG~~~iD~~~~~~~~p-~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~G~~i~~~L~~~gV 96 (306)
T 3bf5_A 19 GMRFLAYFGHLNIDVLISVDSIP-REGSVNVKDLRPRFGGTAGNFAIVAQKFRIPFDLYSAVGMK-THREYLAMIESMGI 96 (306)
T ss_dssp CCEEEEEECCCEEEEEEECSCCC-SSEEEECSEEEEEEEHHHHHHHHHHHHTTCCCEEEEEEETT-TCHHHHHHHHHTTC
T ss_pred CCCcEEEECCceEEEEEecCCCC-CCceEECcceEecCCChHHHHHHHHHHcCCCeEEEEEEeCC-hHHHHHHHHHHcCC
Confidence 44679999999999999999999 88888888889999999999999999999999999999999 99999999999999
Q ss_pred CCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccccEEEEeCCCCHHHHHHHHHHHHhC
Q 023130 146 RLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSA 225 (287)
Q Consensus 146 d~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~~~~~~~~~~~a~~~ 225 (287)
+++++.+.+ +.+|+.+++++++ |+|+++.+.+++..+. +++ + .+++++++++.. .+.++++.+++
T Consensus 97 ~~~~v~~~~--~~~T~~~~~~~~~-g~r~~~~~~ga~~~~~-~~l-----~--~~~~~v~~~~~~---~~~~~~~~a~~- 161 (306)
T 3bf5_A 97 NTGHVEKFE--DESGPICYIATDG-KKQVSFMHQGAMAAWA-PQL-----A--DEYEYVHFSTGP---NYLDMAKSIRS- 161 (306)
T ss_dssp CCTTEEEET--TCCCSEEEEEECS-SCEEEEEECTHHHHCC-CCC-----C--SCEEEEEECSSS---SHHHHHHHCCS-
T ss_pred CchheEecC--CCCCceEEEEEcC-CeeEEEEeCChhhhhh-Hhh-----c--CCCCEEEECChH---HHHHHHHHhCC-
Confidence 999998776 6689999999988 9999988887654433 222 1 678999998766 46777777765
Q ss_pred CCcEEEeCCCCCC----CCchhhccCCcEEecCHHHHHhhcCC
Q 023130 226 GVPVIFDAGGMDA----PIPQELLNFIDILSPNESELGRLTGM 264 (287)
Q Consensus 226 g~~v~~D~~~~~~----~~~~~ll~~~dil~~Ne~E~~~l~g~ 264 (287)
++++|++.... +.+.++++++|++++|++|++.|+|.
T Consensus 162 --~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 202 (306)
T 3bf5_A 162 --KIIFDPSQEIHKYSKDELKKFHEISYMSIFNDHEYRVFREM 202 (306)
T ss_dssp --EEEECCGGGGGGSCHHHHHHHHHHCSEEEEEHHHHHHHHHH
T ss_pred --cEEEcCchhhhhccHHHHHHHHhcCCEEEcCHHHHHHHhCC
Confidence 89999985311 23457889999999999999999874
No 44
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.95 E-value=2.7e-27 Score=209.59 Aligned_cols=199 Identities=22% Similarity=0.305 Sum_probs=164.6
Q ss_pred EEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCCCc
Q 023130 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDY 149 (287)
Q Consensus 70 IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~~~ 149 (287)
+.+.|++++|+++.++++ ..|++++.......+||+++|+|+++++||.++.++|.+|+ .+|+++++.|++.||++++
T Consensus 3 ~tv~~n~~~D~~~~~~~~-~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~L~~~gv~~~~ 80 (306)
T 2abq_A 3 YTVTLNPSIDYIVQVENF-QQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGFLGG-FTGAYVRNALEKEEIGLSF 80 (306)
T ss_dssp EEEESSCEEEEEEECTTC-CSSSEEECSEEEEEEECHHHHHHHHHHHTTCCCEEEEEEEH-HHHHHHHHHHHHTTCEECC
T ss_pred EEEecCchheEEEEcCCc-ccCCeEEeceeEecCCchHHHHHHHHHHcCCCceEEEEecc-hhHHHHHHHHHHcCCceEE
Confidence 567799999999999996 88999999999999999999999999999999999999998 7999999999999999999
Q ss_pred eEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhh---hccccEEEEeCCCC----HHHHHHHHHHH
Q 023130 150 MNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV---VKKAGIVLLQREIP----DSVNIQVAKAA 222 (287)
Q Consensus 150 v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~---l~~a~~v~~~g~~~----~~~~~~~~~~a 222 (287)
+.+.+ .|+.++++ ++|+|+++...++. ++++++.. ..+. +++++++++++..+ .+.+.++++.+
T Consensus 81 v~~~~----~t~~~~~~--~~g~~~~~~~~g~~--~~~~~~~~-~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a 151 (306)
T 2abq_A 81 IEVEG----DTRINVKI--KGKQETELNGTAPL--IKKEHVQA-LLEQLTELEKGDVLVLAGSVPQAMPQTIYRSMTQIA 151 (306)
T ss_dssp EEESS----CCEEEEEE--ESSSCEEEBCCCCC--CCHHHHHH-HHHHHTTCCTTCEEEEESCCCTTSCTTHHHHHHHHH
T ss_pred EEcCC----CCceEEEE--eCCceEEEECCCCC--CCHHHHHH-HHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHHHH
Confidence 98764 57888776 47888766555542 33333321 1122 57899999988765 36788999999
Q ss_pred HhCCCcEEEeCCCCCCCCchhhcc-CCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhhh
Q 023130 223 RSAGVPVIFDAGGMDAPIPQELLN-FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKM 282 (287)
Q Consensus 223 ~~~g~~v~~D~~~~~~~~~~~ll~-~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~ 282 (287)
+++|+++++|+++ ..+.++++ ++|++++|++|++.|+|.+..+.+++.++++++.++
T Consensus 152 ~~~g~~v~~D~~~---~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~ 209 (306)
T 2abq_A 152 KERGAFVAVDTSG---EALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIGE 209 (306)
T ss_dssp HTTTCEEEEECCH---HHHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHT
T ss_pred HhcCCEEEEECCh---HHHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHc
Confidence 9999999999974 23567888 999999999999999997666777887788777654
No 45
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.95 E-value=4.5e-27 Score=208.05 Aligned_cols=198 Identities=21% Similarity=0.281 Sum_probs=162.6
Q ss_pred EEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCCCc
Q 023130 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDY 149 (287)
Q Consensus 70 IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~~~ 149 (287)
+.|.|++++|+++.+++ |..|+.+++......+||+++|+|+++++||.++.++|.+|+ .+|+++++.|++.||++++
T Consensus 3 ~tvt~n~~~D~~~~~~~-~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~l~~~gv~~~~ 80 (306)
T 2jg5_A 3 YTVTFNPSIDYVIFTND-FKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGG-FPGKFIIDTLNNSAIQSNF 80 (306)
T ss_dssp EEEESSCEEEEEEECSS-CCTTSEEECSEEEEEEESHHHHHHHHHHHTTCCCEEEEEECH-HHHHHHHHHHHHTTCEECC
T ss_pred EEEecCceEEEEEEcCC-cccCceEEeceeEecCCchHHHHHHHHHHcCCCeeEEEEecC-cchHHHHHHHHHCCCceeE
Confidence 57789999999999999 589999999999999999999999999999999999999999 6999999999999999999
Q ss_pred eEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhh---hccccEEEEeCCCC----HHHHHHHHHHH
Q 023130 150 MNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV---VKKAGIVLLQREIP----DSVNIQVAKAA 222 (287)
Q Consensus 150 v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~---l~~a~~v~~~g~~~----~~~~~~~~~~a 222 (287)
+.+.+ .|+.++++ ++|+++++...+++ +.++++.. ..+. ++.++++++++.++ .+.+.++++.+
T Consensus 81 v~~~~----~t~~~~~~--~~g~~~~~~~~g~~--~~~~~~~~-~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a 151 (306)
T 2jg5_A 81 IEVDE----DTRINVKL--KTGQETEINAPGPH--ITSTQFEQ-LLQQIKNTTSEDIVIVAGSVPSSIPSDAYAQIAQIT 151 (306)
T ss_dssp EECSS----CCEEEEEE--ESSSEEEEECCCCC--CCHHHHHH-HHHHHTTCCTTCEEEEESCCCTTSCTTHHHHHHHHH
T ss_pred EEcCC----CCeEEEEE--cCCCEEEEECCCCC--CCHHHHHH-HHHHHHhccCCCEEEEeCCCCCCCChHHHHHHHHHH
Confidence 88754 58888766 57888776666653 33333321 1121 56799999988765 36788899999
Q ss_pred HhCCCcEEEeCCCCCCCCchhhcc-CCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhh
Q 023130 223 RSAGVPVIFDAGGMDAPIPQELLN-FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHK 281 (287)
Q Consensus 223 ~~~g~~v~~D~~~~~~~~~~~ll~-~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~ 281 (287)
+++|+++++|+++. .+.++++ ++|+++||++|++.|+|....+.+++.++++++.+
T Consensus 152 ~~~g~~v~~D~~~~---~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~ 208 (306)
T 2jg5_A 152 AQTGAKLVVDAEKE---LAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVD 208 (306)
T ss_dssp HHHCCEEEEECCHH---HHHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHHHHHH
T ss_pred HHCCCEEEEECChH---HHHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 99999999999752 2456676 69999999999999999766677777777777765
No 46
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=99.95 E-value=2.1e-27 Score=211.07 Aligned_cols=186 Identities=19% Similarity=0.233 Sum_probs=153.4
Q ss_pred CCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCC
Q 023130 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVR 146 (287)
Q Consensus 67 ~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd 146 (287)
|++|+|+|++++|++.. .+++..+.......+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.||+
T Consensus 1 M~~v~viG~~~iD~~~~-----~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~ 75 (313)
T 3ewm_A 1 MSLIASIGELLIDLISV-----EEGDLKDVRLFEKHPGGAPANVAVGVSRLGVKSSLISKVGNDPFGEYLIEELSKENVD 75 (313)
T ss_dssp -CEEEEESCCEEEEEES-----SSSCTTTCCEEEEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTCB
T ss_pred CCcEEEECceeeeeecC-----CCCCcccccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCCHHHHHHHHHHHHcCCC
Confidence 46899999999999864 2345556667789999999999999999999999999999999999999999999999
Q ss_pred CCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCC-CCCCCCcccCchhHhhhccccEEEEeCCC-----CHHHHHHHHH
Q 023130 147 LDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGT-NMSCWPEKFGDEDLEVVKKAGIVLLQREI-----PDSVNIQVAK 220 (287)
Q Consensus 147 ~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga-~~~~~~~~l~~~~~~~l~~a~~v~~~g~~-----~~~~~~~~~~ 220 (287)
++++.+.+ +.+|+.+++.++. |+|+++.+.+. +..++++++.. +.++.++++++++.. +.+.+.++++
T Consensus 76 ~~~v~~~~--~~~T~~~~~~~~~-g~~~~~~~~~~a~~~l~~~~~~~---~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~ 149 (313)
T 3ewm_A 76 TRGIVKDE--KKHTGIVFVQLKG-ASPSFLLYDDVAYFNMTLNDINW---DIVEEAKIVNFGSVILARNPSRETVMKVIK 149 (313)
T ss_dssp CTTEEEES--SSCCEEEEEECSS-SSCEEEECCSSGGGCCCGGGCCH---HHHHHCSEEEEESGGGGSTTHHHHHHHHHH
T ss_pred ccceeecC--CCCceEEEEEecC-CCcceEeeccCHHHhCChhhCCH---HHhCCCCEEEEcCcccCCcchHHHHHHHHH
Confidence 99998877 7799999998875 99999888763 34455555542 457889999998853 3467888888
Q ss_pred HHHhCCCcEEEeCCCCCC----------CCchhhccCCcEEecCHHHHHhhcCC
Q 023130 221 AARSAGVPVIFDAGGMDA----------PIPQELLNFIDILSPNESELGRLTGM 264 (287)
Q Consensus 221 ~a~~~g~~v~~D~~~~~~----------~~~~~ll~~~dil~~Ne~E~~~l~g~ 264 (287)
.++ .++++++||+.... +.++++++++|++++|++|++.|++.
T Consensus 150 ~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~ 202 (313)
T 3ewm_A 150 KIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQ 202 (313)
T ss_dssp HHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTT
T ss_pred Hhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhcc
Confidence 888 47999999986431 12456788999999999999999885
No 47
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.94 E-value=5.1e-26 Score=205.20 Aligned_cols=204 Identities=18% Similarity=0.254 Sum_probs=158.0
Q ss_pred CCCCEEEECCceeeeEeecCCCCCCCc--EEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhC
Q 023130 66 TPPPLVVVGSANFDIYVEIDRLPKVGE--TVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGC 143 (287)
Q Consensus 66 ~~~~IlviG~~~iD~~~~vd~~P~~~~--~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~ 143 (287)
..++|+++|+.+.++. .+++ ...+......+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.
T Consensus 11 ~~~~~~~~ge~l~~~~-------~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~ 83 (351)
T 2afb_A 11 HHMKVVTFGEIMLRLS-------PPDHKRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLGDAAAGHLRKF 83 (351)
T ss_dssp CCCEEEEESCCEEEEE-------CSTTCCGGGCSEEEEEEECHHHHHHHHHHHTTSEEEEEEEECSSHHHHHHHHHHHHT
T ss_pred ccceEEEechhhheec-------CCCCccccccceeeEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHc
Confidence 4578999999998864 3443 344667889999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCC---CCCCCcccCchhHhhhccccEEEEeCCCC------HHH
Q 023130 144 GVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTN---MSCWPEKFGDEDLEVVKKAGIVLLQREIP------DSV 214 (287)
Q Consensus 144 gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~---~~~~~~~l~~~~~~~l~~a~~v~~~g~~~------~~~ 214 (287)
||+++++... +.+|+.+++.++.+++++++.+.++. ..+.++++. ....+..++++++++..+ .+.
T Consensus 84 gv~~~~v~~~---~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~--~~~~~~~~~~v~~~g~~~~~~~~~~~~ 158 (351)
T 2afb_A 84 GVKTDYIARG---GNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFD--WEKILDGARWFHFSGITPPLGKELPLI 158 (351)
T ss_dssp TCBCTTEEEC---SSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCC--HHHHTTTEEEEEEETTSGGGSTTHHHH
T ss_pred CCcceeEEEC---CCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCC--HHHhhcCCCEEEEeCcccccChhHHHH
Confidence 9999999874 45899988877653344555544322 233334442 123468899999998653 267
Q ss_pred HHHHHHHHHhCCCcEEEeCCCCCC--------CCchhhccCCcEEecCHHHHHhhcCCCCC---------CHHHHHHHHH
Q 023130 215 NIQVAKAARSAGVPVIFDAGGMDA--------PIPQELLNFIDILSPNESELGRLTGMPTD---------SYEQISEAVV 277 (287)
Q Consensus 215 ~~~~~~~a~~~g~~v~~D~~~~~~--------~~~~~ll~~~dil~~Ne~E~~~l~g~~~~---------~~~~~~~~~~ 277 (287)
+.++++.+++.|+++++||+.... +.+.++++++|++++|++|++.|+|.... +.+++.++++
T Consensus 159 ~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
T 2afb_A 159 LEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAE 238 (351)
T ss_dssp HHHHHHHHHHHTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC-------CHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCchhcCChHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcccccccccccchhhHHHHHH
Confidence 888999999999999999985421 12357889999999999999999997543 5666777777
Q ss_pred HHhh
Q 023130 278 KCHK 281 (287)
Q Consensus 278 ~l~~ 281 (287)
+|.+
T Consensus 239 ~l~~ 242 (351)
T 2afb_A 239 EVTR 242 (351)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 48
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.94 E-value=6.1e-27 Score=206.25 Aligned_cols=191 Identities=20% Similarity=0.159 Sum_probs=142.2
Q ss_pred CCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCC
Q 023130 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRL 147 (287)
Q Consensus 68 ~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~ 147 (287)
++|+|+|++++|++ |. ...+||+++|+|+++++||.++.++|.+|+|.+|+++++.|++.||
T Consensus 4 ~~v~viG~~~~D~~------p~----------~~~~GG~~~N~A~~la~LG~~~~~~~~vG~D~~g~~~~~~l~~~gv-- 65 (296)
T 2qhp_A 4 NIIVGMGEALWDVL------PE----------GKKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIMEVFKEKQL-- 65 (296)
T ss_dssp CEEEEESCCEEEEE------TT----------EEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTC--
T ss_pred ceEEEEchhheEec------CC----------CCCCCCHHHHHHHHHHHcCCCeeEEEEeCCChHHHHHHHHHHHcCC--
Confidence 57999999999997 43 2689999999999999999999999999999999999999999999
Q ss_pred CceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCC-CCCCCcccCchhHhhhccccEEEEeCCC-----CHHHHHHHHHH
Q 023130 148 DYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTN-MSCWPEKFGDEDLEVVKKAGIVLLQREI-----PDSVNIQVAKA 221 (287)
Q Consensus 148 ~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~-~~~~~~~l~~~~~~~l~~a~~v~~~g~~-----~~~~~~~~~~~ 221 (287)
+++.+.+ +.+|+.+++.++++|+|++.++.+.. ..+.+ .+...+.+++++++++.+.. +.+.+.++++.
T Consensus 66 ~~v~~~~--~~~T~~~~v~~~~~g~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~ 140 (296)
T 2qhp_A 66 KNQIERV--DYPTGTVQVTLDDEGVPCYEIKEGVAWDNIPF---TDELKRLALNTRAVCFGSLAQRNEVSRATINRFLDT 140 (296)
T ss_dssp CEEEEEE--SSCCEEEEEC------CCEEECSSCGGGCCCC---CHHHHHHHHTEEEEEECSGGGSSHHHHHHHHHHHHH
T ss_pred CEEeecC--CCCceEEEEEECCCCCEEEEEecCChhhhCCc---chhhHhhhcCCCEEEECChHhcChHHHHHHHHHHHH
Confidence 7788776 67999999999888998887776542 22221 22344667889999986522 23567778888
Q ss_pred HHh-CCCcEEEeCCCCCCC----CchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhh
Q 023130 222 ARS-AGVPVIFDAGGMDAP----IPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHK 281 (287)
Q Consensus 222 a~~-~g~~v~~D~~~~~~~----~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~ 281 (287)
+++ ++.++++|++..... .+.++++++|++++|++|++.|+|....+.++..++++++.+
T Consensus 141 a~~~~~~~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~ 205 (296)
T 2qhp_A 141 MPDIDGQLKIFDINLRQDFYTKEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWILLA 205 (296)
T ss_dssp SCCTTSCEEEEECCCCTTCCCHHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSCHHHHHHHHHH
T ss_pred HHhcCCCEEEEECcCCccccCHHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCCHHHHHHHHHH
Confidence 877 699999999864322 235678899999999999999998532222233444455443
No 49
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.91 E-value=2.4e-24 Score=191.31 Aligned_cols=196 Identities=19% Similarity=0.188 Sum_probs=143.4
Q ss_pred CCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCC-CcEEEEeecCCchHHHHHHHHHhCCCC
Q 023130 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSH-PTYFVGQVGEDANGKLITDALSGCGVR 146 (287)
Q Consensus 68 ~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~-~~~lig~vG~D~~G~~i~~~L~~~gVd 146 (287)
++|+|+|++++|++.. |. ......+||+++|+|+++++||. ++.++|.+|+| +|+.+++.|++.||+
T Consensus 3 ~~ilviG~~~iD~~~~----~~-------~~~~~~~GG~~~NvA~~la~LG~~~~~~ig~vG~D-~g~~~~~~L~~~gVd 70 (313)
T 3kd6_A 3 LSLLVIGSLAFDDIET----PF-------GRSDNTLGGSSTYIALSASYFTDEPIRMVGVVGSD-FGKEHFDLLHAKNID 70 (313)
T ss_dssp CCEEEESCCEEEEEEC----SS-------CEEEEEEECHHHHHHHHHTTTCSSCEEEEEEEETT-SCHHHHHHHHHTTEE
T ss_pred ccEEEEeEEEEeeecC----CC-------CcccccCCCHHHHHHHHHHHhCCCceEEEEecCCC-cHHHHHHHHHHcCCC
Confidence 5799999999999953 11 12467899999999999999999 99999999999 999999999999999
Q ss_pred CCceEEccCCCCCCceEEEE--EcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccccEEEEeCCCCHHHHHHHHHHHHh
Q 023130 147 LDYMNVVKDGGVPTGHAVVM--LQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARS 224 (287)
Q Consensus 147 ~~~v~~~~~~~~~T~~~~v~--i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~~~~~~~~~~~a~~ 224 (287)
++++.+.+ +.+|....-. .+.++++++....+....+.+ ...+.++++++++++ .++++...++++.+ +
T Consensus 71 ~~~v~~~~--~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~-~ 141 (313)
T 3kd6_A 71 TRGIQVIE--DGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDP-----HVPQYYRDSKFVCLG-NIDPELQLKVLDQI-D 141 (313)
T ss_dssp EEEEEEET--TCCCEEEEEEECTTSSCEEEEEEECGGGTTCCC-----CCCGGGTTCSEEEEC-SSCHHHHHHHHTTC-S
T ss_pred ccceEEcC--CCCeeeeeeeeeccccccceeecccchHhhcCc-----cchHHHccCCEEEEc-CCCHHHHHHHHHHH-h
Confidence 99998887 5577432211 233455666555444333222 223567889999995 46666677777777 6
Q ss_pred CCCcEEEeCCCC----CCCCchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhhhcccC
Q 023130 225 AGVPVIFDAGGM----DAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMVSVG 286 (287)
Q Consensus 225 ~g~~v~~D~~~~----~~~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~v~v~ 286 (287)
.+.++++||... ..+.+.++++++|+++||++|++.|+|. .+.+++.+.+.+...+.+|.
T Consensus 142 ~~~~v~~Dp~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~--~~~~~~~~~l~~~g~~~vvv 205 (313)
T 3kd6_A 142 DPKLVVCDTMNFWIEGKPEELKKVLARVDVFIVNDSEARLLSGD--PNLVKTARIIREMGPKTLII 205 (313)
T ss_dssp SCSEEEEECCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHSC--SCHHHHHHHHHTTSCSEEEE
T ss_pred hCCEEEEcChhhhhhhhHHHHHHHHhcCCEEEeCHHHHHHHhCC--CCHHHHHHHHHHcCCCEEEE
Confidence 788999999421 1234567899999999999999999995 45555544444433334443
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.90 E-value=1.5e-24 Score=191.31 Aligned_cols=186 Identities=13% Similarity=0.095 Sum_probs=133.2
Q ss_pred CCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCCCceEEccCCCCCCceEEE
Q 023130 86 RLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVV 165 (287)
Q Consensus 86 ~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v 165 (287)
.+|..++.++.......+||+++|+|+++++||.++.++|.+|+|. +.+++.|++.||+++++.. + .+|+.+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~~-~---~~t~~~~i 91 (298)
T 1vk4_A 18 GHVSKDVNVVDGKREIAYGGGVVMGAITSSLLGVKTKVITKCTRED--VSKFSFLRDNGVEVVFLKS-P---RTTSIENR 91 (298)
T ss_dssp CCCEEEEEEETTEEEEEEECHHHHHHHHHHHTTCEEEEEEEECTTT--GGGGTTTGGGTCEEEEEEC-S---SCEEEEEE
T ss_pred ccccCceEeecCeEEEecCCHHHHHHHHHHHcCCceEEEEEEcCCH--HHHHHHHHHcCCceEEEec-C---CCcEEEEE
Confidence 3444455555556688999999999999999999999999999996 7888999999999998764 3 26777766
Q ss_pred EEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccccEEEEeCCCCHHHHHHHHHHHHhCCCcEEEeCCCC---------
Q 023130 166 MLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM--------- 236 (287)
Q Consensus 166 ~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------- 236 (287)
+ +++|+++++.+.+++..++++++ +. ..++++++++..+.+...++++.++++|+++++|+++.
T Consensus 92 ~-~~~g~~~~~~~~~~~~~l~~~~~-----~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~ 164 (298)
T 1vk4_A 92 Y-GSDPDTRESFLISAADPFTESDL-----AF-IEGEAVHINPLWYGEFPEDLIPVLRRKVMFLSADAQGFVRVPENEKL 164 (298)
T ss_dssp C------CCEEEEEECCCCCCGGGG-----GG-CCSSEEEECCSSTTSSCGGGHHHHHHHCSEEEEETHHHHEEEETTEE
T ss_pred E-cCCCCeeEEEeccccccCCHHHc-----Cc-CCCCEEEECCcccccccHHHHHHHHHcCCEEEEecCccccccccccc
Confidence 5 55788888777776655444333 21 57899998765333334567788888899999999731
Q ss_pred ---CCCCchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHHHHHhhhcccC
Q 023130 237 ---DAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMVSVG 286 (287)
Q Consensus 237 ---~~~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~v~v~ 286 (287)
.++...++++++|++++|++|++.|+|. .+.+++.+.+.+...+.+|.
T Consensus 165 ~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~--~~~~~~~~~l~~~g~~~vvv 215 (298)
T 1vk4_A 165 VYRDWEMKEKYLKYLDLFKVDSREAETLTGT--NDLRESCRIIRSFGAKIILA 215 (298)
T ss_dssp EECCCTTHHHHGGGCSEEEEEHHHHHHHHSC--SCHHHHHHHHHHTTCSSEEE
T ss_pred cccchHHHHhhcccCCEEecCHHHHHHHhCC--CCHHHHHHHHHhcCCCEEEE
Confidence 1234567899999999999999999995 35555554444443334443
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.20 E-value=6.6e-12 Score=110.93 Aligned_cols=140 Identities=22% Similarity=0.254 Sum_probs=95.0
Q ss_pred CcEEEEeecCCchHHHHHHHHHhCCCCCCceEEc--cCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhh
Q 023130 120 PTYFVGQVGEDANGKLITDALSGCGVRLDYMNVV--KDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197 (287)
Q Consensus 120 ~~~lig~vG~D~~G~~i~~~L~~~gVd~~~v~~~--~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~ 197 (287)
.+.++|.+|+|. |+++ |++.||+++++.+. . + +|++++ ..|+ .++++++.. ..+.
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~--~-~t~~~~----~~g~-----------~l~~~~i~~-~~~~ 68 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFS--N-HTGYAH----WKGQ-----------VLNSDELQE-LYEG 68 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEES--S-CTTSSC----CCEE-----------ECCHHHHHH-HHHH
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEec--C-CCCcCC----ccCc-----------cCCHHHHHH-HHHH
Confidence 467889999998 9988 99999999988765 3 3 455433 1121 122233321 1122
Q ss_pred -----hccccEEEEeCCCCH---HHHHHHHHHHHhCCCc--EEEeCCCCCC-----------C---Cch-hhccCCcEEe
Q 023130 198 -----VKKAGIVLLQREIPD---SVNIQVAKAARSAGVP--VIFDAGGMDA-----------P---IPQ-ELLNFIDILS 252 (287)
Q Consensus 198 -----l~~a~~v~~~g~~~~---~~~~~~~~~a~~~g~~--v~~D~~~~~~-----------~---~~~-~ll~~~dil~ 252 (287)
++.++++++....+. +.+.++++.++++|.+ +++||+.... . .+. .+++++|+++
T Consensus 69 ~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~ 148 (312)
T 2yxt_A 69 LRLNNMNKYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIIT 148 (312)
T ss_dssp HHHTTCCCCSEEEECCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEEC
T ss_pred HHhcCCccCCEEEECCCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEc
Confidence 567899876433342 4455788888888865 8899874321 1 122 3789999999
Q ss_pred cCHHHHHhhcCCCCCCHHHHHHHHHHHhhh
Q 023130 253 PNESELGRLTGMPTDSYEQISEAVVKCHKM 282 (287)
Q Consensus 253 ~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~ 282 (287)
||++|++.|+|.+..+.+++.+++++|.++
T Consensus 149 pN~~Ea~~L~g~~~~~~~~~~~~~~~l~~~ 178 (312)
T 2yxt_A 149 PNQFEAELLSGRKIHSQEEALRVMDMLHSM 178 (312)
T ss_dssp CCHHHHHHHHSCCCCSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhCCCCCCHHHHHHHHHHHHHc
Confidence 999999999998766777777777777653
No 52
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=98.85 E-value=1.2e-09 Score=95.05 Aligned_cols=146 Identities=18% Similarity=0.133 Sum_probs=92.5
Q ss_pred cCCCcEE-EEeecCCchHHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCc---
Q 023130 117 LSHPTYF-VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGD--- 192 (287)
Q Consensus 117 LG~~~~l-ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~--- 192 (287)
||..... +|.+|.| .....|++.||++.++.. + ++.+..|.+.+ .+ ..+.++.+..
T Consensus 19 L~i~~~~~~g~~G~d----~~~~~l~~~Gv~~~~v~t----------~-i~~~~~g~~~~---~g--~~~~~~~~~~~~~ 78 (283)
T 2ddm_A 19 VAVQSQVVYGSVGNS----IAVPAIKQNGLNVFAVPT----------V-LLSNTPHYDTF---YG--GAIPDEWFSGYLR 78 (283)
T ss_dssp EEEEEEESSSSSTHH----HHHHHHHHTTCCEEEEEE----------E-EESSCTTSSCC---CE--EECCHHHHHHHHH
T ss_pred EEEecccCCCcchHH----HHHHHHHHcCCeeeEEeE----------E-EeccCCCcCce---ee--eeCCHHHHHHHHH
Confidence 4444333 6667766 345789999999876532 1 22244555541 11 1122222211
Q ss_pred hhHh--hhccccEEEEeCCCC---HHHHHHHHHHHHh--CCCcEEEeCCCCCC---CC-----c----hhhccCCcEEec
Q 023130 193 EDLE--VVKKAGIVLLQREIP---DSVNIQVAKAARS--AGVPVIFDAGGMDA---PI-----P----QELLNFIDILSP 253 (287)
Q Consensus 193 ~~~~--~l~~a~~v~~~g~~~---~~~~~~~~~~a~~--~g~~v~~D~~~~~~---~~-----~----~~ll~~~dil~~ 253 (287)
...+ .+++++++++....+ .+.+.++++.+++ .|+++++||+.... .+ . +.+++++|+++|
T Consensus 79 ~l~~~~~~~~~~~v~~G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~p 158 (283)
T 2ddm_A 79 ALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITP 158 (283)
T ss_dssp HHHHTTCCTTCCEEEECCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECC
T ss_pred HHHhcCCcccCCEEEECCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecC
Confidence 1112 345789998854333 2456778888887 79999999875421 11 1 357889999999
Q ss_pred CHHHHHhhcCCCCCCHHHHHHHHHHHhhh
Q 023130 254 NESELGRLTGMPTDSYEQISEAVVKCHKM 282 (287)
Q Consensus 254 Ne~E~~~l~g~~~~~~~~~~~~~~~l~~~ 282 (287)
|+.|++.|+|.+..+.++..++++++.++
T Consensus 159 N~~E~~~L~g~~~~~~~~~~~~a~~l~~~ 187 (283)
T 2ddm_A 159 NIFELEILTGKNCRDLDSAIAAAKSLLSD 187 (283)
T ss_dssp BHHHHHHHHTSCCSSHHHHHHHHHHHCCS
T ss_pred CHHHHHHHhCCCCCCHHHHHHHHHHHHHc
Confidence 99999999998766778888888888653
No 53
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=98.79 E-value=2.5e-09 Score=93.26 Aligned_cols=82 Identities=15% Similarity=0.130 Sum_probs=63.1
Q ss_pred ccEEEEeCCCCHHHHHHHHHHHHhCCCc-EEEeCCCCCCC-----------Cch-hhccCCcEEecCHHHHHhhcCC-CC
Q 023130 201 AGIVLLQREIPDSVNIQVAKAARSAGVP-VIFDAGGMDAP-----------IPQ-ELLNFIDILSPNESELGRLTGM-PT 266 (287)
Q Consensus 201 a~~v~~~g~~~~~~~~~~~~~a~~~g~~-v~~D~~~~~~~-----------~~~-~ll~~~dil~~Ne~E~~~l~g~-~~ 266 (287)
++++++....+.+.+..+++.+++.+.+ +++||+..... .+. .+++++|+++||+.|++.|+|. ..
T Consensus 95 ~~~v~~G~l~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~~~~ 174 (288)
T 1jxh_A 95 IDTTKIGMLAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDAPHA 174 (288)
T ss_dssp CSEEEECCCCSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHTCCCC
T ss_pred CCEEEECCCCCHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHcCCCCC
Confidence 6888775544677888999999999996 99999865210 122 3788999999999999999997 66
Q ss_pred CCHHHHHHHHHHHhhh
Q 023130 267 DSYEQISEAVVKCHKM 282 (287)
Q Consensus 267 ~~~~~~~~~~~~l~~~ 282 (287)
.+.++..++++++.++
T Consensus 175 ~~~~~~~~~a~~l~~~ 190 (288)
T 1jxh_A 175 RTEQEMLAQGRALLAM 190 (288)
T ss_dssp CSHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHh
Confidence 6777888888887653
No 54
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=98.69 E-value=1.2e-08 Score=87.41 Aligned_cols=82 Identities=21% Similarity=0.241 Sum_probs=61.7
Q ss_pred ccEEEEeCCCCHHHHHHHHHHHHhCC-CcEEEeCCCCCCC-----------Cc-hhhccCCcEEecCHHHHHhhcCCCCC
Q 023130 201 AGIVLLQREIPDSVNIQVAKAARSAG-VPVIFDAGGMDAP-----------IP-QELLNFIDILSPNESELGRLTGMPTD 267 (287)
Q Consensus 201 a~~v~~~g~~~~~~~~~~~~~a~~~g-~~v~~D~~~~~~~-----------~~-~~ll~~~dil~~Ne~E~~~l~g~~~~ 267 (287)
.+.+++....+.+.+..+++.+++++ +++++||+..... .+ +++++++|+++||+.|++.|+|.+..
T Consensus 71 ~~~v~~G~l~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~~ 150 (258)
T 1ub0_A 71 LHAAKTGALGDAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLGRPIR 150 (258)
T ss_dssp CSEEEECCCCSHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHCSCCC
T ss_pred CCEEEECCcCCHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhCCCCC
Confidence 57776654334567788889999988 8999999754211 12 35788999999999999999998767
Q ss_pred CHHHHHHHHHHHhhh
Q 023130 268 SYEQISEAVVKCHKM 282 (287)
Q Consensus 268 ~~~~~~~~~~~l~~~ 282 (287)
+.++..++++++.++
T Consensus 151 ~~~~~~~~a~~l~~~ 165 (258)
T 1ub0_A 151 TLKEAEEAAKALLAL 165 (258)
T ss_dssp SHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHc
Confidence 777888888888663
No 55
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=98.46 E-value=6.9e-07 Score=76.85 Aligned_cols=83 Identities=18% Similarity=0.193 Sum_probs=63.5
Q ss_pred cccEEEEeCCCCHHHHHHHHHHHHhCCC-cEEEeCCCCCCC-----------Cc-hhhccCCcEEecCHHHHHhhcCCC-
Q 023130 200 KAGIVLLQREIPDSVNIQVAKAARSAGV-PVIFDAGGMDAP-----------IP-QELLNFIDILSPNESELGRLTGMP- 265 (287)
Q Consensus 200 ~a~~v~~~g~~~~~~~~~~~~~a~~~g~-~v~~D~~~~~~~-----------~~-~~ll~~~dil~~Ne~E~~~l~g~~- 265 (287)
..+.+++....+.+.+..+++.+++.+. ++++||+..... .+ +++++++|+++||+.|++.|+|.+
T Consensus 74 ~~d~v~~G~l~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g~~~ 153 (271)
T 2i5b_A 74 GVDAMKTGMLPTVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSGMDE 153 (271)
T ss_dssp CCSEEEECCCCSHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHTCCC
T ss_pred CCCEEEECCCCCHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhCCCC
Confidence 5678877543346778888999999998 599999754321 12 257789999999999999999986
Q ss_pred CCCHHHHHHHHHHHhhh
Q 023130 266 TDSYEQISEAVVKCHKM 282 (287)
Q Consensus 266 ~~~~~~~~~~~~~l~~~ 282 (287)
..+.++..++++++.++
T Consensus 154 ~~~~~~~~~~a~~l~~~ 170 (271)
T 2i5b_A 154 LKTVDDMIEAAKKIHAL 170 (271)
T ss_dssp CCSHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHh
Confidence 66677888888887663
No 56
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=98.17 E-value=6.5e-06 Score=71.01 Aligned_cols=89 Identities=21% Similarity=0.315 Sum_probs=61.6
Q ss_pred hHhhhccccEEEEeC-CCC---HHHHHHHHHHHHhCCCcEEEeCCCCCCCC-----chhhcc--CCcEEecCHHHHHhhc
Q 023130 194 DLEVVKKAGIVLLQR-EIP---DSVNIQVAKAARSAGVPVIFDAGGMDAPI-----PQELLN--FIDILSPNESELGRLT 262 (287)
Q Consensus 194 ~~~~l~~a~~v~~~g-~~~---~~~~~~~~~~a~~~g~~v~~D~~~~~~~~-----~~~ll~--~~dil~~Ne~E~~~l~ 262 (287)
..+.+..++++++.. ..+ .+.+.++++.+++.|+++++||....... ..++++ ++|+++||+.|++.|+
T Consensus 52 ~~~~~~~a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~~~ll~~~~~~vitPN~~E~~~L~ 131 (272)
T 1ekq_A 52 VADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTV 131 (272)
T ss_dssp HHHHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHHHC
T ss_pred HHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHHHHHHccCCCeEECCCHHHHHHHh
Confidence 345567899988844 333 24577788888899999999997542111 135666 8999999999999999
Q ss_pred CCC-C--------CCHHHHHHHHHHHhhh
Q 023130 263 GMP-T--------DSYEQISEAVVKCHKM 282 (287)
Q Consensus 263 g~~-~--------~~~~~~~~~~~~l~~~ 282 (287)
|.+ . .+.++..+++++|.++
T Consensus 132 g~~~~~~~gvd~~~~~~~~~~aa~~l~~~ 160 (272)
T 1ekq_A 132 GVTDWLIKGVDAGEGGGDIIRLAQQAAQK 160 (272)
T ss_dssp C---------------HHHHHHHHHHHHH
T ss_pred CCCcccccCccCCCCHHHHHHHHHHHHHH
Confidence 975 3 3456777777777654
No 57
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=97.93 E-value=1.2e-05 Score=69.94 Aligned_cols=83 Identities=22% Similarity=0.168 Sum_probs=61.9
Q ss_pred ccccEEEEeCCCCH----HHHHHHHHHHHhCC--CcEEEeCCCCCC-----------CCc-hhhccCCcEEecCHHHHHh
Q 023130 199 KKAGIVLLQREIPD----SVNIQVAKAARSAG--VPVIFDAGGMDA-----------PIP-QELLNFIDILSPNESELGR 260 (287)
Q Consensus 199 ~~a~~v~~~g~~~~----~~~~~~~~~a~~~g--~~v~~D~~~~~~-----------~~~-~~ll~~~dil~~Ne~E~~~ 260 (287)
.+.+++ ..|.++. +.+.++++.+++++ .++++||..... +.+ +.+++++|+++||+.|++.
T Consensus 76 ~~~d~v-~~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~ 154 (289)
T 3pzs_A 76 KDCDAV-LSGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELEQ 154 (289)
T ss_dssp GGCCEE-EECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHHH
T ss_pred cCCCEE-EECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHHH
Confidence 478886 5566652 45677777887766 889999853211 112 2478899999999999999
Q ss_pred hcCCCCCCHHHHHHHHHHHhhh
Q 023130 261 LTGMPTDSYEQISEAVVKCHKM 282 (287)
Q Consensus 261 l~g~~~~~~~~~~~~~~~l~~~ 282 (287)
|+|.+..+.+++.+++++|.++
T Consensus 155 L~g~~~~~~~~~~~aa~~l~~~ 176 (289)
T 3pzs_A 155 LSGERVENVEQAVQVARSLCAR 176 (289)
T ss_dssp HHTSCCCSHHHHHHHHHHHHTT
T ss_pred HhCCCCCCHHHHHHHHHHHHHH
Confidence 9998877888898899888753
No 58
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=97.88 E-value=3e-05 Score=67.78 Aligned_cols=83 Identities=22% Similarity=0.157 Sum_probs=59.3
Q ss_pred ccccEEEEeCCCC-H---HHHHHHHHHHHhCC------CcEEEeCCCCCC--CC--------chhhccCCcEEecCHHHH
Q 023130 199 KKAGIVLLQREIP-D---SVNIQVAKAARSAG------VPVIFDAGGMDA--PI--------PQELLNFIDILSPNESEL 258 (287)
Q Consensus 199 ~~a~~v~~~g~~~-~---~~~~~~~~~a~~~g------~~v~~D~~~~~~--~~--------~~~ll~~~dil~~Ne~E~ 258 (287)
..+|++.. |.++ . +.+.++++..++.+ .++++||...+. .+ +.++++++|+++||..|+
T Consensus 75 ~~~daV~t-G~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~~adiitPN~~Ea 153 (300)
T 3zs7_A 75 SNYRYILT-GYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELVPLADIVTPNYFEA 153 (300)
T ss_dssp GGCSEEEE-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHGGGCSEECCCHHHH
T ss_pred ccCCEEEE-CCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHhhhCCEecCCHHHH
Confidence 46787655 6665 3 34555666666554 789999953321 11 245899999999999999
Q ss_pred HhhcCCCCCCHHHHHHHHHHHhhh
Q 023130 259 GRLTGMPTDSYEQISEAVVKCHKM 282 (287)
Q Consensus 259 ~~l~g~~~~~~~~~~~~~~~l~~~ 282 (287)
+.|+|.+..+.+++.+++++|+++
T Consensus 154 ~~L~g~~~~~~~~~~~aa~~L~~~ 177 (300)
T 3zs7_A 154 SLLSGVTVNDLSSAILAADWFHNC 177 (300)
T ss_dssp HHHHSSCCCSHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHh
Confidence 999998878888888888888764
No 59
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=97.82 E-value=3e-05 Score=67.21 Aligned_cols=81 Identities=16% Similarity=0.159 Sum_probs=58.1
Q ss_pred cccEEEEeCCC-CHHHHHHHHHHHHhC-CCcEEEeCCCCC----CC--------CchhhccCCcEEecCHHHHHhhcCCC
Q 023130 200 KAGIVLLQREI-PDSVNIQVAKAARSA-GVPVIFDAGGMD----AP--------IPQELLNFIDILSPNESELGRLTGMP 265 (287)
Q Consensus 200 ~a~~v~~~g~~-~~~~~~~~~~~a~~~-g~~v~~D~~~~~----~~--------~~~~ll~~~dil~~Ne~E~~~l~g~~ 265 (287)
+.+.+.+ |.+ ..+.+..+++..++. +.++++||+... +. .++++++++|+++||+.|++.|+|.+
T Consensus 74 ~~daik~-G~l~s~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~g~~ 152 (282)
T 3h74_A 74 HFDQALI-GYVGSVALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLTGAP 152 (282)
T ss_dssp CCSEEEE-CCCCSHHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHHTCC
T ss_pred ccCEEEE-CCCCCHHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHhCCC
Confidence 5677777 444 455566666666664 688999996442 11 12468999999999999999999986
Q ss_pred CCCHHHHHHHHHHHhh
Q 023130 266 TDSYEQISEAVVKCHK 281 (287)
Q Consensus 266 ~~~~~~~~~~~~~l~~ 281 (287)
..+.+++.+++++|.+
T Consensus 153 ~~~~~~~~~aa~~L~~ 168 (282)
T 3h74_A 153 YQVTPDLEVILPALQA 168 (282)
T ss_dssp CCSSCCHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHH
Confidence 6555667777777766
No 60
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=97.81 E-value=2.7e-05 Score=67.71 Aligned_cols=82 Identities=17% Similarity=0.151 Sum_probs=59.2
Q ss_pred cccEEEEeCCC-CH---HHHHHHHHHHHhCCCcEEEeCCCCCC----C--------CchhhccCCcEEecCHHHHHhhcC
Q 023130 200 KAGIVLLQREI-PD---SVNIQVAKAARSAGVPVIFDAGGMDA----P--------IPQELLNFIDILSPNESELGRLTG 263 (287)
Q Consensus 200 ~a~~v~~~g~~-~~---~~~~~~~~~a~~~g~~v~~D~~~~~~----~--------~~~~ll~~~dil~~Ne~E~~~l~g 263 (287)
..+.+.+ |.+ .. +.+.++++.+++.++++++||..... . .++++++++|+++||+.|++.|+|
T Consensus 77 ~~~aik~-G~l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~g 155 (291)
T 3mbh_A 77 QFDAIYT-GYLGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLLD 155 (291)
T ss_dssp CCSEEEE-CCCSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHHT
T ss_pred ccCEEEE-CCCCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHhC
Confidence 4677766 444 22 44566666665568999999975421 1 125789999999999999999999
Q ss_pred CCCC---CHHHHHHHHHHHhhh
Q 023130 264 MPTD---SYEQISEAVVKCHKM 282 (287)
Q Consensus 264 ~~~~---~~~~~~~~~~~l~~~ 282 (287)
.+.. +.+++.+++++|.++
T Consensus 156 ~~~~~~~~~~~~~~aa~~L~~~ 177 (291)
T 3mbh_A 156 EPYKADSTDEELKEYLRLLSDK 177 (291)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHHHHhh
Confidence 7643 677888888887763
No 61
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=97.42 E-value=0.00019 Score=65.97 Aligned_cols=177 Identities=12% Similarity=0.065 Sum_probs=105.0
Q ss_pred eeecCchHHHHHHHHHHcCC-CcEEEEeecCCchHHHHHHHHHhCCCCCC----------------------ceEEccCC
Q 023130 100 QTLAGGKGANQAACGAKLSH-PTYFVGQVGEDANGKLITDALSGCGVRLD----------------------YMNVVKDG 156 (287)
Q Consensus 100 ~~~~GG~a~N~A~~la~LG~-~~~lig~vG~D~~G~~i~~~L~~~gVd~~----------------------~v~~~~~~ 156 (287)
....||.+.-+|..++++|. +|.+.+..+. +...+.| ..+|-.- .+...=
T Consensus 113 ~~~~GGnA~imAn~La~lg~~~Vi~~~p~~s----k~~~~ll-~~~i~~p~~e~g~l~l~~~~ea~~~~~~~~iH~I~-- 185 (474)
T 3drw_A 113 EERLGGQAGIIANTLAGLKIRKVIAYTPFLP----KRLAELF-KKGVLYPVVENGELQFKPIQEAYREGDPLKINRIF-- 185 (474)
T ss_dssp EEEEESHHHHHHHHHHHTTCSEEEECCSCCC----HHHHTTS-CTTEEEEEESSSSEEEEEGGGCCCTTCCCCEEEEE--
T ss_pred eEecCChHHHHHHHHHHcCCCcEEEecCcCC----HHHHHhc-CCcceeecccCCceeecCchhhhccCCCCCcEEEE--
Confidence 56899999999999999999 5777777654 3444444 2222110 010000
Q ss_pred CCCCceEEE-----EEcCCCCeeEEEeCCCCC-CCC-CcccCchhHhhhccccEEEEeCCC------C-----H---HHH
Q 023130 157 GVPTGHAVV-----MLQSDGQNSIIIVGGTNM-SCW-PEKFGDEDLEVVKKAGIVLLQREI------P-----D---SVN 215 (287)
Q Consensus 157 ~~~T~~~~v-----~i~~~Ger~~~~~~ga~~-~~~-~~~l~~~~~~~l~~a~~v~~~g~~------~-----~---~~~ 215 (287)
+.+.|..+. ++.+.-+|-++.+...+. .+. .+++.+...+..+.+|.++++|.. + . +..
T Consensus 186 Ey~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~~e~f~~~l~e~~~~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~ 265 (474)
T 3drw_A 186 EFRKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIKPFLGEIGKEVDGAIFSGYQGLRTKYSDGKDANYYLRRA 265 (474)
T ss_dssp EECTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSCCTTTGGGHHHHHHHCSEEEECCGGGCCSBCTTSCBHHHHHHHH
T ss_pred EcCCCCeeecCCceEEccCCCeEEEEcCCCCHHhccccHHHHHHHHHhhcCCCEEEEeccccccccccccccHHHHHHHH
Confidence 122333332 222333344444444443 222 244432222333469999998821 1 1 223
Q ss_pred HHHHHHHHhCCCcEEEeCCCCCC-----CCchhhccCCcEEecCHHHHHhhcCC-----------CCCCHHHHHHHHHHH
Q 023130 216 IQVAKAARSAGVPVIFDAGGMDA-----PIPQELLNFIDILSPNESELGRLTGM-----------PTDSYEQISEAVVKC 279 (287)
Q Consensus 216 ~~~~~~a~~~g~~v~~D~~~~~~-----~~~~~ll~~~dil~~Ne~E~~~l~g~-----------~~~~~~~~~~~~~~l 279 (287)
.+.++..+..+++|-|...+... ...+.+++++|.+-+||+|+..+.+. ...+.+++.++++.+
T Consensus 266 ~e~i~~l~~~~~~iH~E~As~~~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~lg~~~~s~~~~~~~~i~~v~e~~~~l 345 (474)
T 3drw_A 266 KEDIIEFKEKDVKIHVEFASVQDRKLRKKIITNILPFVDSVGIDEAEIAQILSVLGYRELADRIFTYNRLEDSILGGMII 345 (474)
T ss_dssp HHHHHHHHHTTCEEEEECCCCSCHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHHHTCHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCeEEEEeCccccHHHHHHHHHHhcccccccccCHHHHHHHHHHhcCCccchhhhcCCCHHHHHHHHHHH
Confidence 35555566889999999986532 23467899999999999999887663 123467788888877
Q ss_pred hhhc
Q 023130 280 HKMV 283 (287)
Q Consensus 280 ~~~v 283 (287)
.+..
T Consensus 346 l~~~ 349 (474)
T 3drw_A 346 LDEL 349 (474)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 6654
No 62
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=97.23 E-value=0.0003 Score=60.28 Aligned_cols=90 Identities=22% Similarity=0.333 Sum_probs=62.6
Q ss_pred hhHhhhccccEEEEeCCCC-HH---HHHHHHHHHHhCCCcEEEeCCCCCCC-----Cchhhcc-CCcEEecCHHHHHhhc
Q 023130 193 EDLEVVKKAGIVLLQREIP-DS---VNIQVAKAARSAGVPVIFDAGGMDAP-----IPQELLN-FIDILSPNESELGRLT 262 (287)
Q Consensus 193 ~~~~~l~~a~~v~~~g~~~-~~---~~~~~~~~a~~~g~~v~~D~~~~~~~-----~~~~ll~-~~dil~~Ne~E~~~l~ 262 (287)
+..+.+..++.+++...++ .+ .+..+++.+++.++|+++||...... ....++. .++++.||..|++.|+
T Consensus 49 e~~~~~~~~dalvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~vITPN~~E~~~L~ 128 (265)
T 1v8a_A 49 ELEEMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALL 128 (265)
T ss_dssp THHHHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHHH
T ss_pred HHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHHHHHHHhCCcEEcCCHHHHHHHh
Confidence 3446678899999976554 22 45567778888999999999864211 1123443 3899999999999999
Q ss_pred CCCC-----C----CHHHHHHHHHHHhhh
Q 023130 263 GMPT-----D----SYEQISEAVVKCHKM 282 (287)
Q Consensus 263 g~~~-----~----~~~~~~~~~~~l~~~ 282 (287)
|.+. + +.++..++++++.++
T Consensus 129 g~~~~~~gvd~~~~~~~~~~~aa~~la~~ 157 (265)
T 1v8a_A 129 GEEGKTRGVDSLEYGEEEAKKLTMNAARE 157 (265)
T ss_dssp HHHC----------CHHHHHHHHHHHHHH
T ss_pred CCcccccCcCcccccHHHHHHHHHHHHHH
Confidence 8542 1 226777788887765
No 63
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=97.12 E-value=0.00074 Score=63.87 Aligned_cols=82 Identities=17% Similarity=0.189 Sum_probs=55.9
Q ss_pred cccEEEEeCCCCHHHHHH---HHHHHHhCCCcEEEeCCCCC--------CC----CchhhccCCcEEecCHHHHHhhcCC
Q 023130 200 KAGIVLLQREIPDSVNIQ---VAKAARSAGVPVIFDAGGMD--------AP----IPQELLNFIDILSPNESELGRLTGM 264 (287)
Q Consensus 200 ~a~~v~~~g~~~~~~~~~---~~~~a~~~g~~v~~D~~~~~--------~~----~~~~ll~~~dil~~Ne~E~~~l~g~ 264 (287)
..+.+.+.. +..+.+.. +++..++.+.++++||.... .+ +.+.+++.+|+++||..|++.|+|.
T Consensus 91 ~~daIkiG~-ls~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~Ea~~L~g~ 169 (550)
T 3rm5_A 91 KCNVIKTGM-LTAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYKLLGE 169 (550)
T ss_dssp CCSEEEECS-CCHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHHHHHHHSC
T ss_pred CCCEEEECC-CCHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHHHHHHhCC
Confidence 578887753 36554444 44444445889999996431 01 1236889999999999999999997
Q ss_pred C--CCCHHHHHHHHHHHhhh
Q 023130 265 P--TDSYEQISEAVVKCHKM 282 (287)
Q Consensus 265 ~--~~~~~~~~~~~~~l~~~ 282 (287)
+ ..+.+++.+++++|.++
T Consensus 170 ~~~i~~~~d~~~aa~~L~~~ 189 (550)
T 3rm5_A 170 ERKVNGLQDIFQIAKDLAKI 189 (550)
T ss_dssp CCCCCSSHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHh
Confidence 3 45567777778777654
No 64
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=96.80 E-value=0.0069 Score=51.90 Aligned_cols=92 Identities=15% Similarity=0.170 Sum_probs=62.9
Q ss_pred chhHhhhccccEEEEeCCC-CH---HHHHHHHHHHHhCCCcEEEeCCCCCCCC-----chhhc-cCCcEEecCHHHHHhh
Q 023130 192 DEDLEVVKKAGIVLLQREI-PD---SVNIQVAKAARSAGVPVIFDAGGMDAPI-----PQELL-NFIDILSPNESELGRL 261 (287)
Q Consensus 192 ~~~~~~l~~a~~v~~~g~~-~~---~~~~~~~~~a~~~g~~v~~D~~~~~~~~-----~~~ll-~~~dil~~Ne~E~~~l 261 (287)
++..+.++.++.+++.-.. .. +.+..+++.+++.++|+++||-...... ...++ ...+++.||..|++.|
T Consensus 50 ~e~~e~~~~a~alvIn~G~l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~~~Ll~~~~~VItpN~~E~~~L 129 (273)
T 3dzv_A 50 REFPQMFQQTSALVLNLGHLSQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLVHNQPTVVKGNLSEMRTF 129 (273)
T ss_dssp GGHHHHHTTCSEEEEECCSCCHHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHHHHHHHTCCSEEEEEHHHHHHH
T ss_pred HHHHHHHHHCCeEEEecCCCChHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHHHHHHhcCCcEECCCHHHHHHH
Confidence 3455677889999886433 33 3466777788999999999997543111 12222 3689999999999999
Q ss_pred cCCCCC----C-------HH---HHHHHHHHHhhhc
Q 023130 262 TGMPTD----S-------YE---QISEAVVKCHKMV 283 (287)
Q Consensus 262 ~g~~~~----~-------~~---~~~~~~~~l~~~v 283 (287)
+|.... | .+ +..++++++.++.
T Consensus 130 ~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~ 165 (273)
T 3dzv_A 130 CQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKF 165 (273)
T ss_dssp TTCCCC-------CGGGSHHHHHHHHHHHHHHHHHS
T ss_pred hCCcccccccccccccchhhhhHHHHHHHHHHHHHh
Confidence 996531 1 13 5667777777653
No 65
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=96.73 E-value=0.015 Score=53.34 Aligned_cols=173 Identities=16% Similarity=0.131 Sum_probs=103.0
Q ss_pred ecCchHHHHHHHHHHcCCCcEE--EEeecCCchHHHHHHHHHhCCCCCCceEE-------------ccCCCCCCceEEEE
Q 023130 102 LAGGKGANQAACGAKLSHPTYF--VGQVGEDANGKLITDALSGCGVRLDYMNV-------------VKDGGVPTGHAVVM 166 (287)
Q Consensus 102 ~~GG~a~N~A~~la~LG~~~~l--ig~vG~D~~G~~i~~~L~~~gVd~~~v~~-------------~~~~~~~T~~~~v~ 166 (287)
..||.+..+|..++.+|.++.+ ++.+|. .+.+.|...+|.. ... .. ..+....+++
T Consensus 109 ~~GGnA~imAn~la~lg~~~vl~~~~~l~~-----~~~~lf~~~~i~~--p~~~~~~~~l~~~~e~~~--~~~~~iH~I~ 179 (455)
T 1ua4_A 109 RMGGQAGIMANLLGGVYGVPVIVHVPQLSR-----LQANLFLDGPIYV--PTLENGEVKLIHPKEFSG--DEENCIHYIY 179 (455)
T ss_dssp EEESHHHHHHHHHTTTTCCCEEECCSCCCH-----HHHTTSCSSSEEE--EEEETTEEEEECGGGCSC--CCCCCEEEEE
T ss_pred ccCCcHHHHHHHHHHcCCCEEEEeCCCCCH-----HHHHhcCCCCeEe--ecccCCccccccchhhcc--CCCCCceEEE
Confidence 8999999999999999999887 666554 4555554333332 001 01 1245555555
Q ss_pred EcCCCCe----------eEEEeC-CCCCCCC-CcccCchhHhhhccccEEEEeCC--CC----HHHH---HHHHHHHHhC
Q 023130 167 LQSDGQN----------SIIIVG-GTNMSCW-PEKFGDEDLEVVKKAGIVLLQRE--IP----DSVN---IQVAKAARSA 225 (287)
Q Consensus 167 i~~~Ger----------~~~~~~-ga~~~~~-~~~l~~~~~~~l~~a~~v~~~g~--~~----~~~~---~~~~~~a~~~ 225 (287)
--+.|++ .|+... -.+..+. .+.+.+...+...++|.++++|. ++ .+.. ++.++..+..
T Consensus 180 Ef~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~ 259 (455)
T 1ua4_A 180 EFPRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNER 259 (455)
T ss_dssp EECTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHT
T ss_pred EcCCCCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCC
Confidence 5555642 222222 2222221 23333222233345999999983 11 1211 1211223677
Q ss_pred CCcEEEeCCCCCC-----CCchhhccCCcEEecCHHHHHhhcCC-------------CCCCHHHHHHHHHHHhhhcc
Q 023130 226 GVPVIFDAGGMDA-----PIPQELLNFIDILSPNESELGRLTGM-------------PTDSYEQISEAVVKCHKMVS 284 (287)
Q Consensus 226 g~~v~~D~~~~~~-----~~~~~ll~~~dil~~Ne~E~~~l~g~-------------~~~~~~~~~~~~~~l~~~v~ 284 (287)
++++-|+..+... ... .+++++|.+-+||+|+..+.+. +..+++++.+++.++.+...
T Consensus 260 ~~~iH~ElAs~~~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~~lg~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 335 (455)
T 1ua4_A 260 EIPVHLEFAFTPDEKVREEIL-NVLGMFYSVGLNEVELASIMEILGEKKLAKELLAHDPVDPIAVTEAMLKLAKKTG 335 (455)
T ss_dssp TCCEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHTTSSSSCCHHHHHHHHHHHHHHHC
T ss_pred CceEEEEeCCccCHHHHHHHH-hhhccCcccccCHHHHHHHHHHhCCCccccccccCCccCHHHHHHHHHHHHHHcC
Confidence 8999999987542 234 7899999999999999777442 11237888888888876644
No 66
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=96.58 E-value=0.0023 Score=55.15 Aligned_cols=84 Identities=21% Similarity=0.273 Sum_probs=57.4
Q ss_pred hccccEEEEeCCCCH-HHHHHHHHHHHhCCCcEEEeCCCCCCCCchhhccCCcEEecCHHHHHhhcCCCCCCH-HHHHHH
Q 023130 198 VKKAGIVLLQREIPD-SVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSY-EQISEA 275 (287)
Q Consensus 198 l~~a~~v~~~g~~~~-~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~-~~~~~~ 275 (287)
+++++++++...+.. +...++++.+.+.+.++++|........+ ......+++.||..|++.|+|.+..+. ++..++
T Consensus 96 l~~~davviGPGlg~~~~~~~~~~~~l~~~~p~VlDAdal~~~~l-~~~~~~~vlTPN~~E~~~L~g~~~~~~~~d~~~a 174 (279)
T 3rpz_A 96 EETYRAIAIGPGLPQTESVQQAVDHVLTADCPVILDAGALAKRTY-PKREGPVILTPHPGEFFRMTGVPVNELQKKRAEY 174 (279)
T ss_dssp SSCCSEEEECTTCCCCHHHHHHHHHHTTSSSCEEECGGGCCSCCC-CCCSSCEEECCCHHHHHHHHCCCHHHHTTSHHHH
T ss_pred ccCCCEEEECCCCCCCHHHHHHHHHHHhhCCCEEEECCccchhhh-hhccCCEEEecCHHHHHHHhCCCccchHHHHHHH
Confidence 567899999765543 34567778787889999999976532111 112467899999999999999753322 345556
Q ss_pred HHHHhhh
Q 023130 276 VVKCHKM 282 (287)
Q Consensus 276 ~~~l~~~ 282 (287)
++++.++
T Consensus 175 a~~la~~ 181 (279)
T 3rpz_A 175 AKEWAAQ 181 (279)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666553
No 67
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=96.57 E-value=0.0081 Score=56.47 Aligned_cols=91 Identities=21% Similarity=0.224 Sum_probs=64.9
Q ss_pred chhHhhhcc-ccEEEEeCCCC--HHHHHHHHHHHHhCCCcEEEeCCCCCCC-----Cchhhcc--CCcEEecCHHHHHhh
Q 023130 192 DEDLEVVKK-AGIVLLQREIP--DSVNIQVAKAARSAGVPVIFDAGGMDAP-----IPQELLN--FIDILSPNESELGRL 261 (287)
Q Consensus 192 ~~~~~~l~~-a~~v~~~g~~~--~~~~~~~~~~a~~~g~~v~~D~~~~~~~-----~~~~ll~--~~dil~~Ne~E~~~l 261 (287)
++..+..+. ++.+++.-... .+.+..+++.+++.++|+++||-..... ...++++ ..+++.||..|++.|
T Consensus 297 ~E~~e~~~~~~~alvin~G~l~~~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~~~~Ll~~~~~~vItpN~~E~~~L 376 (540)
T 3nl6_A 297 SEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGL 376 (540)
T ss_dssp HHHHHHTTSTTCEEEEESSCSCCHHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHHHHHHTTSCCCSEEEECHHHHHHH
T ss_pred HHHHHHHhccCCeEEEeCCCCCHHHHHHHHHHHHHHcCCCEEEChHHhhcccccHHHHHHHHhhCCCeEECCCHHHHHHH
Confidence 345566777 89998864332 5677888888999999999999765321 1245666 789999999999999
Q ss_pred cCCCC------C-----CHHHHHHHHHHHhhh
Q 023130 262 TGMPT------D-----SYEQISEAVVKCHKM 282 (287)
Q Consensus 262 ~g~~~------~-----~~~~~~~~~~~l~~~ 282 (287)
+|... + +.++..++++++.++
T Consensus 377 ~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~ 408 (540)
T 3nl6_A 377 AELNKERMKGVDASSGISNELLIQATKIVAFK 408 (540)
T ss_dssp TTC--------------CCHHHHHHHHHHHHH
T ss_pred hCCCcccccccccccccCHHHHHHHHHHHHHH
Confidence 99642 1 126667777777765
No 68
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=96.21 E-value=0.0064 Score=51.80 Aligned_cols=91 Identities=21% Similarity=0.312 Sum_probs=62.1
Q ss_pred hhHhhhccccEEEEeCC-CCH---HHHHHHHHHHHhCCCcEEEeCCCCCC-----CCchhhc-cCCcEEecCHHHHHhhc
Q 023130 193 EDLEVVKKAGIVLLQRE-IPD---SVNIQVAKAARSAGVPVIFDAGGMDA-----PIPQELL-NFIDILSPNESELGRLT 262 (287)
Q Consensus 193 ~~~~~l~~a~~v~~~g~-~~~---~~~~~~~~~a~~~g~~v~~D~~~~~~-----~~~~~ll-~~~dil~~Ne~E~~~l~ 262 (287)
+..+....++.+++.-. +.+ +.+..+.+.|.+.|+|+++||-.... ....+++ .+.+++.+|..|+..|+
T Consensus 49 E~~e~~~~a~al~iNiGtl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~~~ll~~~~~vIrgN~sEi~~L~ 128 (265)
T 3hpd_A 49 ELEEMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALL 128 (265)
T ss_dssp THHHHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHHH
T ss_pred HHHHHHHHCCeEEEECCCCChHHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHHHHHHhcCCcEEcCCHHHHHHHh
Confidence 44466677888888643 333 34667778889999999999975421 1122332 46899999999999998
Q ss_pred CCCC---------CCHHHHHHHHHHHhhhc
Q 023130 263 GMPT---------DSYEQISEAVVKCHKMV 283 (287)
Q Consensus 263 g~~~---------~~~~~~~~~~~~l~~~v 283 (287)
|... .+.++..++++++.++.
T Consensus 129 g~~~~~~gvds~~~~~~d~~~~a~~lA~~~ 158 (265)
T 3hpd_A 129 GEEGKTRGVDSLEYGEEEAKKLTMNAAREF 158 (265)
T ss_dssp HHHC----------CHHHHHHHHHHHHHHT
T ss_pred cccCCCCCccCccccHHHHHHHHHHHHHHh
Confidence 7421 23567777777776653
No 69
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=96.11 E-value=0.00091 Score=58.60 Aligned_cols=84 Identities=20% Similarity=0.295 Sum_probs=51.6
Q ss_pred hhhccccEEEEeCCCC--HHHHHHHHHHHHh--CCCcEEEeCCCCCCCCch---hh-c-cCCcEEecCHHHHHhhcCCCC
Q 023130 196 EVVKKAGIVLLQREIP--DSVNIQVAKAARS--AGVPVIFDAGGMDAPIPQ---EL-L-NFIDILSPNESELGRLTGMPT 266 (287)
Q Consensus 196 ~~l~~a~~v~~~g~~~--~~~~~~~~~~a~~--~g~~v~~D~~~~~~~~~~---~l-l-~~~dil~~Ne~E~~~l~g~~~ 266 (287)
+.++.++.+.+.-.+. .+....+.+..+. .++++++|+.... +.. .+ + +..++++||..|++.|+|.+.
T Consensus 121 ~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~--ll~~~~~l~L~~~~~viTPN~~E~~~L~g~~~ 198 (311)
T 3bgk_A 121 EQITAADVVLMGPGLAEDDLAQTTFDVVWQAIEPKQTLIIDGSAIN--LLAKRKPAIWPTKQIILTPHQKEWERLSGLTI 198 (311)
T ss_dssp HHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCCTTSEEEEETHHHH--HHHHCC-CCCSCSCEEEECCSCC-CTTTCCCS
T ss_pred HHhccCCEEEEcCCCCCCHHHHHHHHHHHHHcCCCCeEEEeCChhh--hhccChhhcCCCCCEEECCcHHHHHHHhCCCC
Confidence 4456788988864343 3322222223333 3889999996321 000 11 3 578999999999999999865
Q ss_pred CCH-HHH-HHHHHHHhh
Q 023130 267 DSY-EQI-SEAVVKCHK 281 (287)
Q Consensus 267 ~~~-~~~-~~~~~~l~~ 281 (287)
.+. ++. .++++++.+
T Consensus 199 ~~~~~d~~~~aa~~l~~ 215 (311)
T 3bgk_A 199 PEQIEAATQTALAHFPK 215 (311)
T ss_dssp TTCCHHHHHHHHTTSCT
T ss_pred CcchhhHHHHHHHHHhc
Confidence 554 456 777777654
No 70
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=95.98 E-value=0.0022 Score=56.05 Aligned_cols=83 Identities=14% Similarity=0.169 Sum_probs=51.3
Q ss_pred hhhccccEEEEeCCCC--HHHHHHHHHHHHh--CCCcEEEeCCCCC-----CCCchhhccCCcEEecCHHHHHhhcCCCC
Q 023130 196 EVVKKAGIVLLQREIP--DSVNIQVAKAARS--AGVPVIFDAGGMD-----APIPQELLNFIDILSPNESELGRLTGMPT 266 (287)
Q Consensus 196 ~~l~~a~~v~~~g~~~--~~~~~~~~~~a~~--~g~~v~~D~~~~~-----~~~~~~ll~~~dil~~Ne~E~~~l~g~~~ 266 (287)
+.++.++.+.+...+. .+....+.+..+. .++++++|+.... ...+.. +..++++||..|++.|+|.+.
T Consensus 107 ~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~ll~~~~~~l~~--~~~~viTPN~~E~~~L~g~~~ 184 (310)
T 2r3b_A 107 NVVEQADVILIGPGLGLDATAQQILKMVLAQHQKQQWLIIDGSAITLFSQGNFSLTY--PEKVVFTPHQMEWQRLSHLPI 184 (310)
T ss_dssp HHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCCTTCEEEEETHHHHHHHHTTCCCSS--GGGEEEECCHHHHHHHHCCCG
T ss_pred HHhccCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCCcEEEcCCcchhcccchhhhcC--CCCEEEcCCHHHHHHHhCCCC
Confidence 4456788988864343 2222222222333 4899999996321 111111 467899999999999999765
Q ss_pred CCHH-HH-HHHHHHHh
Q 023130 267 DSYE-QI-SEAVVKCH 280 (287)
Q Consensus 267 ~~~~-~~-~~~~~~l~ 280 (287)
.+.+ +. .++++++.
T Consensus 185 ~~~~~~~a~~aA~~lg 200 (310)
T 2r3b_A 185 EQQTLANNQRQQAKLG 200 (310)
T ss_dssp GGCCHHHHHHHHHHHT
T ss_pred CcccchHHHHHHHHhC
Confidence 4433 44 77888873
No 71
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=95.93 E-value=0.025 Score=51.99 Aligned_cols=171 Identities=14% Similarity=0.055 Sum_probs=96.7
Q ss_pred ecCchHHHHHHHHHHcCCCcEE--EEeecCCchHHHHHHHHHhCCCCCCceEEccC-----------CCCCCceEEEEEc
Q 023130 102 LAGGKGANQAACGAKLSHPTYF--VGQVGEDANGKLITDALSGCGVRLDYMNVVKD-----------GGVPTGHAVVMLQ 168 (287)
Q Consensus 102 ~~GG~a~N~A~~la~LG~~~~l--ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-----------~~~~T~~~~v~i~ 168 (287)
..||.+.-+|..++.+|.++.+ ++.+ |....+.|...+|..- ...++ .+.+.-.-+++--
T Consensus 117 ~mGGnAgimAn~la~lg~~~vl~~~~~~-----s~~~~~l~~~~~i~~p--~~~~g~l~~~~~~ea~~~~~~~iH~I~Ey 189 (467)
T 1gc5_A 117 RIGGQAGIMANLLGGVYRIPTIVHVPQN-----PKLQAELFVDGPIYVP--VFEGNKLKLVHPKDAIAEEEELIHYIYEF 189 (467)
T ss_dssp EEESHHHHHHHHHHHTSCCCEEECCSCC-----CHHHHTTSCSSSEEEE--EECSSCEEEECGGGSCCSCCCCEEEEEEE
T ss_pred ccCccHHHHHHHHHhcCCCEEEEcCCCC-----CHHHHHhcCCCCeeee--eccCCceecccchhhccCCCCcceEEEEc
Confidence 9999999999999999999877 5544 4556666643333211 00000 0012333333333
Q ss_pred CCC-----------CeeEEEeCCCCCCCCCcccCchhHhhh----ccccEEEEeCC----C--C-----HH---HHHHHH
Q 023130 169 SDG-----------QNSIIIVGGTNMSCWPEKFGDEDLEVV----KKAGIVLLQRE----I--P-----DS---VNIQVA 219 (287)
Q Consensus 169 ~~G-----------er~~~~~~ga~~~~~~~~l~~~~~~~l----~~a~~v~~~g~----~--~-----~~---~~~~~~ 219 (287)
+.| +|-++.+...+..+. ..+++.+.+ .++|.++++|. . + .+ .+.+.+
T Consensus 190 ~~G~~~~~~~aPraNRfI~s~D~~N~~l~---~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l 266 (467)
T 1gc5_A 190 PRGFQVFDVQAPRENRFIANADDYNARVY---MRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHL 266 (467)
T ss_dssp CSSCEETTEECSSCEEEEEECCSSTTTTC---CCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHH
T ss_pred CCCCeecceeccCCceEEEecCCCCcccc---ccHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHHHHH
Confidence 333 233333332232221 223333333 45999999882 1 1 11 123333
Q ss_pred HHHHhCCCcEEEeCCCCCC-----CCchhhccCCcEEecCHHHHHhh---cCCC-------CCCHHHHHHHHHHHhhhc
Q 023130 220 KAARSAGVPVIFDAGGMDA-----PIPQELLNFIDILSPNESELGRL---TGMP-------TDSYEQISEAVVKCHKMV 283 (287)
Q Consensus 220 ~~a~~~g~~v~~D~~~~~~-----~~~~~ll~~~dil~~Ne~E~~~l---~g~~-------~~~~~~~~~~~~~l~~~v 283 (287)
+.....+++|-|...+... ... .+++++|.+-+||+|+..+ .|.+ ..+..++.+++..+.+..
T Consensus 267 ~~l~~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~lg~~~l~~~i~~p~v~~v~~~~~~ll~~~ 344 (467)
T 1gc5_A 267 NILNRYNVKSHFEFAYTANRRVREALV-ELLPKFTSVGLNEVELASIMEIIGDEELAKEVLEGHIFSVIDAMNVLMDET 344 (467)
T ss_dssp HHHHHTTCEEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HhhcCCCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHHcCCCcccccccCCCHHHHHHHHHHHHHhc
Confidence 3335679999999986542 235 7899999999999999843 3421 012666677777766543
No 72
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=95.91 E-value=0.0054 Score=56.25 Aligned_cols=171 Identities=15% Similarity=0.081 Sum_probs=96.5
Q ss_pred ecCchHHHHHHHHHHcCCCcEE--EEeecCCchHHHHHHHHHhCCCCCCce----EE--c-----cCCCCCCceEEEE--
Q 023130 102 LAGGKGANQAACGAKLSHPTYF--VGQVGEDANGKLITDALSGCGVRLDYM----NV--V-----KDGGVPTGHAVVM-- 166 (287)
Q Consensus 102 ~~GG~a~N~A~~la~LG~~~~l--ig~vG~D~~G~~i~~~L~~~gVd~~~v----~~--~-----~~~~~~T~~~~v~-- 166 (287)
..||.+.-+|..++.+|.++.+ ++.+ |+...+.|...+|..-.+ .. . . +.+.-.-+++
T Consensus 112 ~mGGnA~imAn~la~lg~~~vl~~~~~~-----s~~~~~l~~~~~i~~p~~~~g~l~l~~~~e~~~--~~~~~iH~I~Ey 184 (457)
T 1l2l_A 112 RMGGQVGIMANLLGGVYGIPVIAHVPQL-----SELQASLFLDGPIYVPTFERGELRLIHPREFRK--GEEDCIHYIYEF 184 (457)
T ss_dssp EEESHHHHHHHHHTTTSCCCEEECCSSC-----CHHHHHTSCSSSEEEEC------CEECGGGC------CCCEEECCEE
T ss_pred ccCchHHHHHHHHHHcCCCEEEEcCCCC-----CHHHHHhcCCCCeEeeeccCCceeccCchhhcc--CCCCcceEEEEc
Confidence 8999999999999999999877 5554 445555554222221100 00 0 0 0112222222
Q ss_pred ---------EcCCCCeeEEEeCCCCCCCCCcccCchhHhhh----ccccEEEEeCCC--C----HH---HHHHHHHHHHh
Q 023130 167 ---------LQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVV----KKAGIVLLQREI--P----DS---VNIQVAKAARS 224 (287)
Q Consensus 167 ---------i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l----~~a~~v~~~g~~--~----~~---~~~~~~~~a~~ 224 (287)
+.+.-+|-++.+...+..+. ..+++.+.+ .++|.++++|.. . +. ...+.++..+.
T Consensus 185 ~~G~~~~~~~aPraNRfI~s~D~~N~~l~---~~e~f~~~l~e~~~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~ 261 (457)
T 1l2l_A 185 PRNFKVLDFEAPRENRFIGAADDYNPILY---VREEWIERFEEIAKRSELAIISGLHPLTQENHGKPIKLVREHLKILND 261 (457)
T ss_dssp CTTCEETTEECSSCEEEEEEECSSGGGTC---CCHHHHHSHHHHHTTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHH
T ss_pred CCCCeecceecCCCCeEEEEcCCCCCCCc---ccHHHHHHHHhhccCCCEEEEeccccccccchhhhHHHHHHHHHHhcC
Confidence 22223344444433333321 222333333 459999999841 1 11 12222333367
Q ss_pred CCCcEEEeCCCCCC-----CCchhhccCCcEEecCHHHHHhh---cCC----------CCCCHHHHHHHHHHHhhhc
Q 023130 225 AGVPVIFDAGGMDA-----PIPQELLNFIDILSPNESELGRL---TGM----------PTDSYEQISEAVVKCHKMV 283 (287)
Q Consensus 225 ~g~~v~~D~~~~~~-----~~~~~ll~~~dil~~Ne~E~~~l---~g~----------~~~~~~~~~~~~~~l~~~v 283 (287)
.+++|-|...+... ... .+++++|-+-+||+|+..+ .|. +..+..++.+++..+.+..
T Consensus 262 ~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~lg~~~l~~~i~~~~~~~v~~v~~~~~~ll~~~ 337 (457)
T 1l2l_A 262 LGIRAHLEFAFTPDEVVRLEIV-KLLKHFYSVGLNEVELASVVSVMGEKELAERIISKDPADPIAVIEGLLKLIKET 337 (457)
T ss_dssp TTCEEEEECCCCSSHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHHHHSSSCCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHHcCCcccccccccCCccCHHHHHHHHHHHHHhc
Confidence 89999999986532 235 7899999999999999874 331 1133677777777776654
No 73
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=95.27 E-value=0.012 Score=54.92 Aligned_cols=87 Identities=17% Similarity=0.255 Sum_probs=55.3
Q ss_pred hHhhhccccEEEEeCCCCH-HHHHHHHH-HHHhCCCcEEEeCCCCCCCCchhhc---cCCcEEecCHHHHHhhcCCCCCC
Q 023130 194 DLEVVKKAGIVLLQREIPD-SVNIQVAK-AARSAGVPVIFDAGGMDAPIPQELL---NFIDILSPNESELGRLTGMPTDS 268 (287)
Q Consensus 194 ~~~~l~~a~~v~~~g~~~~-~~~~~~~~-~a~~~g~~v~~D~~~~~~~~~~~ll---~~~dil~~Ne~E~~~l~g~~~~~ 268 (287)
..+.+..++.+++...+.. +...++++ .+++.++++++|+..... ...+++ +..+++.||..|++.|+|.+..+
T Consensus 314 ~~~~~~~~davviGpGlg~~~~~~~~~~~~l~~~~~pvVlDadgl~~-l~~~ll~~~~~~~vlTPN~~E~~~L~g~~~~~ 392 (502)
T 3rss_A 314 CLELSKDVDVVAIGPGLGNNEHVREFVNEFLKTLEKPAVIDADAINV-LDTSVLKERKSPAVLTPHPGEMARLVKKTVGD 392 (502)
T ss_dssp HHHHHTTCSEEEECTTCCCSHHHHHHHHHHHHHCCSCEEECHHHHHT-CCHHHHHHCSSCEEECCCHHHHHHHHTCCHHH
T ss_pred HHHHhccCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCEEEeCcccch-hcHHHHhccCCCEEEeCCHHHHHHHhCCCccc
Confidence 3456788999999765442 23344444 456779999999974321 112333 45799999999999999965322
Q ss_pred H-HHHHHHHHHHhhh
Q 023130 269 Y-EQISEAVVKCHKM 282 (287)
Q Consensus 269 ~-~~~~~~~~~l~~~ 282 (287)
. ++ .++++++.++
T Consensus 393 ~~~d-~~aa~~la~~ 406 (502)
T 3rss_A 393 VKYN-YELAEEFAKE 406 (502)
T ss_dssp HTTC-HHHHHHHHHH
T ss_pred hHHH-HHHHHHHHHH
Confidence 1 23 4555555543
No 74
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=76.84 E-value=0.43 Score=43.97 Aligned_cols=78 Identities=14% Similarity=0.099 Sum_probs=44.7
Q ss_pred ccccEEEEeCCCC---HHHHHHHHHHHHhCCCcEEEeCCCCCCCCchhhccCCcEEecCHHHHHhhcCC-----CCCCH-
Q 023130 199 KKAGIVLLQREIP---DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGM-----PTDSY- 269 (287)
Q Consensus 199 ~~a~~v~~~g~~~---~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~ll~~~dil~~Ne~E~~~l~g~-----~~~~~- 269 (287)
.+++.+++...+. .+ +.+++ +. . |+++|............++...++.||..|++.|+|. +..+.
T Consensus 291 ~~~~a~~iGPGlG~~~~~-l~~~l---~~-~-p~VlDADaL~~~~~~~~~~~~~VlTPh~~E~~rL~g~~~~~v~~~~~~ 364 (475)
T 3k5w_A 291 NLLSAFALGMGLENIPKD-FNRWL---EL-A-PCVLDAGVFYHKEILQALEKEAVLTPHPKEFLSLLNLVGINISMLELL 364 (475)
T ss_dssp SSCSEEEECTTCSSCCTT-HHHHH---HH-S-CEEEEGGGGGSGGGGTTTTSSEEEECCHHHHHHHHHHTSCCCCTTSGG
T ss_pred cCCCEEEEcCCCCCCHHH-HHHHH---hc-C-CEEEECcccCCchhhhccCCCEEECCCHHHHHHHhCCccCCCCcchhH
Confidence 5678888854322 12 33333 23 4 9999997542221223445568999999999999985 33332
Q ss_pred HHHHHHHHHHhhh
Q 023130 270 EQISEAVVKCHKM 282 (287)
Q Consensus 270 ~~~~~~~~~l~~~ 282 (287)
++..++++++.++
T Consensus 365 ~d~~~aa~~la~~ 377 (475)
T 3k5w_A 365 DNKLEIARDFSQK 377 (475)
T ss_dssp GSCC--CHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3344555555443
No 75
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=70.31 E-value=20 Score=27.60 Aligned_cols=76 Identities=14% Similarity=0.168 Sum_probs=47.8
Q ss_pred EEEEeCCCC---HHHHHHHHHHHHhCCCcEEEeCCCCCC-CCchhhccCCcEEec-----CHHHHHhhcCCCCCCHHHHH
Q 023130 203 IVLLQREIP---DSVNIQVAKAARSAGVPVIFDAGGMDA-PIPQELLNFIDILSP-----NESELGRLTGMPTDSYEQIS 273 (287)
Q Consensus 203 ~v~~~g~~~---~~~~~~~~~~a~~~g~~v~~D~~~~~~-~~~~~ll~~~dil~~-----Ne~E~~~l~g~~~~~~~~~~ 273 (287)
-+.++|.-| ++.+.++++.+++.|..+.+..++... +..+.+++..|.+.+ +++....+.|.. .+.+.
T Consensus 6 ~v~~tGGEPll~~~~~~~l~~~~~~~g~~~~l~TNG~l~~~~~~~l~~~~d~v~isld~~~~~~~~~~~g~~---~~~i~ 82 (182)
T 3can_A 6 GVTFCGGEPLLHPEFLIDILKRCGQQGIHRAVDTTLLARKETVDEVMRNCELLLIDLKSMDSTVHQTFCDVP---NELIL 82 (182)
T ss_dssp CEEECSSTGGGSHHHHHHHHHHHHHTTCCEEEECTTCCCHHHHHHHHHTCSEEEEECCCSCHHHHHHHHSSC---SHHHH
T ss_pred EEEEEcccccCCHHHHHHHHHHHHHCCCcEEEECCCCCCHHHHHHHHhhCCEEEEECCCCCHHHHHHHhCCC---HHHHH
Confidence 344555333 454568889999999999999987632 233456666776544 566666777743 25566
Q ss_pred HHHHHHhh
Q 023130 274 EAVVKCHK 281 (287)
Q Consensus 274 ~~~~~l~~ 281 (287)
+..+.+.+
T Consensus 83 ~~i~~l~~ 90 (182)
T 3can_A 83 KNIRRVAE 90 (182)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66665544
No 76
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=65.57 E-value=1.4 Score=32.45 Aligned_cols=79 Identities=11% Similarity=0.059 Sum_probs=57.1
Q ss_pred cccEEEEeCCCCHHHHHHHHHHHHhCCCcEEEeCCCCCC---CCchhhccCCcEEecCHHHHHhhcCCCCCCHHHHHHHH
Q 023130 200 KAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDA---PIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAV 276 (287)
Q Consensus 200 ~a~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~---~~~~~ll~~~dil~~Ne~E~~~l~g~~~~~~~~~~~~~ 276 (287)
.++++...|.++.+.+..+.+.++.+++.+..|+...-. ..+.+.++.+...+....++ |.+.-+++.+.+++
T Consensus 26 ~~~iI~t~Gsi~~~~l~~I~~~~~~r~VIi~TD~D~~GekIRk~i~~~lp~~~hafi~r~~~----gVE~a~~~~I~~aL 101 (119)
T 2fcj_A 26 PVVIVCTNGTISDARLEELADELEGYDVYLLADADEAGEKLRRQFRRMFPEAEHLYIDRAYR----EVAAAPIWHLAQVL 101 (119)
T ss_dssp CCEEEECCSCCCHHHHHHHHHHTTTSEEEEECCSSHHHHHHHHHHHHHCTTSEEECCCTTTC----STTTSCHHHHHHHH
T ss_pred CCCEEEeCCccCHHHHHHHHHHhcCCCEEEEECCCccHHHHHHHHHHHCCCCcEEeccCCcc----CcccCCHHHHHHHH
Confidence 578888888877776667777777778877889964321 23457778888888888764 76667788888888
Q ss_pred HHHhhh
Q 023130 277 VKCHKM 282 (287)
Q Consensus 277 ~~l~~~ 282 (287)
.+....
T Consensus 102 ~~~~~~ 107 (119)
T 2fcj_A 102 LRARFD 107 (119)
T ss_dssp HHTTCC
T ss_pred Hhcccc
Confidence 775443
No 77
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=52.80 E-value=24 Score=28.24 Aligned_cols=77 Identities=19% Similarity=0.233 Sum_probs=49.8
Q ss_pred cEEEEeCCCC---HHHHHHHHHHHHhCCCcEEEeCCCCC---CCCchhhccCCcEEec-----CHHHHHhhcCCCCCCHH
Q 023130 202 GIVLLQREIP---DSVNIQVAKAARSAGVPVIFDAGGMD---APIPQELLNFIDILSP-----NESELGRLTGMPTDSYE 270 (287)
Q Consensus 202 ~~v~~~g~~~---~~~~~~~~~~a~~~g~~v~~D~~~~~---~~~~~~ll~~~dil~~-----Ne~E~~~l~g~~~~~~~ 270 (287)
..+.+.|.-| ++.+.++++.+++.|..+.+..++.. .+..+.++..+|.+.+ |++....+.|.. .+
T Consensus 71 ~~i~~~GGEP~l~~~~l~~l~~~~~~~~~~i~i~Tng~~~~~~~~~~~l~~~~~~v~isld~~~~~~~~~~~~~~---~~ 147 (245)
T 3c8f_A 71 GGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVS---NH 147 (245)
T ss_dssp CEEEEEESCGGGGHHHHHHHHHHHHTTTCCEEEEECCCCCCCCHHHHHHHHTCSEEEEECCCSSHHHHHHHHSSC---SH
T ss_pred CeEEEECCCcCCCHHHHHHHHHHHHHcCCcEEEEeCCCcCcCHHHHHHHHHhCCEEEEeCCCCCHHHhhhccCCC---HH
Confidence 4555655333 45568899999999999999887642 2234456666776654 677777787743 25
Q ss_pred HHHHHHHHHhh
Q 023130 271 QISEAVVKCHK 281 (287)
Q Consensus 271 ~~~~~~~~l~~ 281 (287)
.+.+.++.+.+
T Consensus 148 ~~~~~i~~l~~ 158 (245)
T 3c8f_A 148 RTLEFAKYLAN 158 (245)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 66666666554
No 78
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=47.68 E-value=1.2e+02 Score=26.11 Aligned_cols=94 Identities=15% Similarity=0.118 Sum_probs=56.6
Q ss_pred ecCchHHHHHHHHHHcCC-CcEEE------------------EeecCCchHHHHHHHHHhCCCCCCceEEccCCCCCCce
Q 023130 102 LAGGKGANQAACGAKLSH-PTYFV------------------GQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGH 162 (287)
Q Consensus 102 ~~GG~a~N~A~~la~LG~-~~~li------------------g~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~ 162 (287)
-.||.|..+|.+|++.|. +.+++ .-+|. .-.+.+.+.|++.+=++. +....
T Consensus 43 G~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~-~Ka~~~~~~l~~lnp~v~-v~~~~-------- 112 (346)
T 1y8q_A 43 GLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGR-NRAEASLERAQNLNPMVD-VKVDT-------- 112 (346)
T ss_dssp CCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTS-BHHHHHHHHHHHTCTTSE-EEEEC--------
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcC-CHHHHHHHHHHhHCCCeE-EEEEe--------
Confidence 378999999999999997 44555 12232 234566667776543332 11111
Q ss_pred EEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccccEEEEeCCCCHHHHHHHHHHHHhCCCcEEE
Q 023130 163 AVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIF 231 (287)
Q Consensus 163 ~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~ 231 (287)
.. +.+...+.+.++|+|+.+. ...++...+-+.+++++++++.
T Consensus 113 ------~~-------------------~~~~~~~~~~~~dvVv~~~-d~~~~r~~ln~~~~~~~ip~i~ 155 (346)
T 1y8q_A 113 ------ED-------------------IEKKPESFFTQFDAVCLTC-CSRDVIVKVDQICHKNSIKFFT 155 (346)
T ss_dssp ------SC-------------------GGGCCHHHHTTCSEEEEES-CCHHHHHHHHHHHHHTTCEEEE
T ss_pred ------cc-------------------cCcchHHHhcCCCEEEEcC-CCHHHHHHHHHHHHHcCCCEEE
Confidence 00 0001124567889997654 4555566778888999987654
No 79
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=42.32 E-value=27 Score=22.37 Aligned_cols=30 Identities=7% Similarity=0.107 Sum_probs=23.3
Q ss_pred cCHHHHHhhcCCCCC----CHHHHHHHHHHHhhh
Q 023130 253 PNESELGRLTGMPTD----SYEQISEAVVKCHKM 282 (287)
Q Consensus 253 ~Ne~E~~~l~g~~~~----~~~~~~~~~~~l~~~ 282 (287)
++.+||..++|.... +.+++.++.++|...
T Consensus 1 mt~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~ 34 (65)
T 2guz_B 1 MTLDESCKILNIEESKGDLNMDKINNRFNYLFEV 34 (65)
T ss_dssp CCHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHH
Confidence 478899999998644 678888888887653
No 80
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=40.32 E-value=1.4e+02 Score=26.05 Aligned_cols=91 Identities=23% Similarity=0.313 Sum_probs=51.1
Q ss_pred EEeec-CCchHHHHHHHHHhCCCCCCceE-EccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccc
Q 023130 124 VGQVG-EDANGKLITDALSGCGVRLDYMN-VVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKA 201 (287)
Q Consensus 124 ig~vG-~D~~G~~i~~~L~~~gVd~~~v~-~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a 201 (287)
++.+| ....|..+.+.|.+.+....-+. ... ....|..+.+ .|. ... .+++.. +.+..+
T Consensus 5 VaIvGATG~vG~eLlrlL~~~~~p~~el~~~as--~~saG~~~~~---~~~-~~~----------~~~~~~---~~~~~~ 65 (366)
T 3pwk_A 5 VAVVGATGAVGAQMIKMLEESTLPIDKIRYLAS--ARSAGKSLKF---KDQ-DIT----------IEETTE---TAFEGV 65 (366)
T ss_dssp EEEETTTSHHHHHHHHHHHTCCCCEEEEEEEEC--TTTTTCEEEE---TTE-EEE----------EEECCT---TTTTTC
T ss_pred EEEECCCChHHHHHHHHHhcCCCCcEEEEEEEc--cccCCCccee---cCC-Cce----------EeeCCH---HHhcCC
Confidence 34455 34579999999998754322122 122 2234444432 111 111 011221 235678
Q ss_pred cEEEEeCCCCHHHHHHHHHHHHhCCCcEEEeCCCC
Q 023130 202 GIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM 236 (287)
Q Consensus 202 ~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~D~~~~ 236 (287)
|+++++. +.....+.+..+.+.|+ .++|.+..
T Consensus 66 Dvvf~a~--~~~~s~~~a~~~~~~G~-~vIDlSa~ 97 (366)
T 3pwk_A 66 DIALFSA--GSSTSAKYAPYAVKAGV-VVVDNTSY 97 (366)
T ss_dssp SEEEECS--CHHHHHHHHHHHHHTTC-EEEECSST
T ss_pred CEEEECC--ChHhHHHHHHHHHHCCC-EEEEcCCc
Confidence 9998863 66667788888888888 56788754
No 81
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=39.67 E-value=67 Score=27.90 Aligned_cols=91 Identities=19% Similarity=0.234 Sum_probs=50.7
Q ss_pred EEeec-CCchHHHHHHHHHhCCCCCC-ceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhccc
Q 023130 124 VGQVG-EDANGKLITDALSGCGVRLD-YMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKA 201 (287)
Q Consensus 124 ig~vG-~D~~G~~i~~~L~~~gVd~~-~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~~a 201 (287)
++.+| ....|..+++.|.+...... ...... ....|..+.+. |. ...+ +++.+ +.+..+
T Consensus 4 VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s--~~~aG~~~~~~---~~-~~~~----------~~~~~---~~~~~~ 64 (344)
T 3tz6_A 4 IGIVGATGQVGQVMRTLLDERDFPASAVRFFAS--ARSQGRKLAFR---GQ-EIEV----------EDAET---ADPSGL 64 (344)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCCEEEEEEEEC--TTTSSCEEEET---TE-EEEE----------EETTT---SCCTTC
T ss_pred EEEECCCChHHHHHHHHHHhCCCCceEEEEEEC--cccCCCceeec---CC-ceEE----------EeCCH---HHhccC
Confidence 34455 34579999999998743221 111222 22445544421 11 1110 11111 235678
Q ss_pred cEEEEeCCCCHHHHHHHHHHHHhCCCcEEEeCCCC
Q 023130 202 GIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM 236 (287)
Q Consensus 202 ~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~D~~~~ 236 (287)
|+++++ .+.....+.+..+.+.|+ .++|.+..
T Consensus 65 Dvvf~a--~~~~~s~~~a~~~~~~G~-~vID~Sa~ 96 (344)
T 3tz6_A 65 DIALFS--AGSAMSKVQAPRFAAAGV-TVIDNSSA 96 (344)
T ss_dssp SEEEEC--SCHHHHHHHHHHHHHTTC-EEEECSST
T ss_pred CEEEEC--CChHHHHHHHHHHHhCCC-EEEECCCc
Confidence 999885 466667778888888888 67888754
No 82
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=39.36 E-value=11 Score=28.04 Aligned_cols=38 Identities=5% Similarity=0.108 Sum_probs=31.4
Q ss_pred CchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCC
Q 023130 104 GGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRL 147 (287)
Q Consensus 104 GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~ 147 (287)
+|.+...+..++..|.++.+++.+|. ..++.|++ ||.+
T Consensus 65 ~g~g~~~~~~L~~~gv~~VI~g~iG~-----~a~~~L~~-GI~v 102 (136)
T 2re2_A 65 AARGVFMLKSALDHGANALVLSEIGS-----PGFNFIKN-KMDV 102 (136)
T ss_dssp SCHHHHHHHHHHHTTCSEEEESCCBH-----HHHHHHTT-TSEE
T ss_pred CCccHHHHHHHHHcCCCEEEECCCCH-----hHHHHHHC-CCEE
Confidence 57777888899999999999998865 34488999 9985
No 83
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=37.99 E-value=25 Score=28.84 Aligned_cols=28 Identities=7% Similarity=-0.040 Sum_probs=24.6
Q ss_pred eeecCchHHHHHHHHHHcCCCcEEEEee
Q 023130 100 QTLAGGKGANQAACGAKLSHPTYFVGQV 127 (287)
Q Consensus 100 ~~~~GG~a~N~A~~la~LG~~~~lig~v 127 (287)
..+.|+-|.-.|..+++.|.+|.+++.-
T Consensus 25 N~SSG~mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 25 NHSTGHLGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp ECCCCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3568889999999999999999999863
No 84
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=35.17 E-value=32 Score=28.10 Aligned_cols=52 Identities=12% Similarity=0.077 Sum_probs=38.5
Q ss_pred cccEEEEeCCC-CHHHHHHHHHHHHhCCCcEEEeCCCCC-CCCchhhccCCcEEe
Q 023130 200 KAGIVLLQREI-PDSVNIQVAKAARSAGVPVIFDAGGMD-APIPQELLNFIDILS 252 (287)
Q Consensus 200 ~a~~v~~~g~~-~~~~~~~~~~~a~~~g~~v~~D~~~~~-~~~~~~ll~~~dil~ 252 (287)
.++++.+..+. .. ...++++.++++|+++.+..++.. .+..+++++.+|++.
T Consensus 80 GAd~itvh~Ea~~~-~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~~D~Vl 133 (231)
T 3ctl_A 80 GADFITLHPETING-QAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKIT 133 (231)
T ss_dssp TCSEEEECGGGCTT-THHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEE
T ss_pred CCCEEEECcccCCc-cHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhcCCEEE
Confidence 58899887655 32 478899999999999877776432 245677888899885
No 85
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=33.49 E-value=79 Score=23.10 Aligned_cols=41 Identities=15% Similarity=0.045 Sum_probs=29.1
Q ss_pred HHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEE
Q 023130 133 GKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIII 177 (287)
Q Consensus 133 G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~ 177 (287)
=+...+.|++.|+....-.... +.++...+.|++|..-.+.
T Consensus 109 vda~~~~l~~~Gv~~~~~p~~~----~~g~~~~f~DPdGn~iel~ 149 (155)
T 4g6x_A 109 IAAEYERLSALGVRFTQEPTDM----GPVVTAILDDTCGNLIQLM 149 (155)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEC----SSCEEEEEECSSSCEEEEE
T ss_pred hhhhhhHHhcCCcEEeeCCEEc----CCeEEEEEECCCCCEEEEE
Confidence 3567789999999864333332 5677788899999875543
No 86
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=33.49 E-value=67 Score=21.33 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=29.0
Q ss_pred cccEEEEeCCCCHHHHHHHHHHHHhCCCcEEEeCC
Q 023130 200 KAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAG 234 (287)
Q Consensus 200 ~a~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~D~~ 234 (287)
.+.+|++....+++....+...|+++++|+++-.+
T Consensus 27 kaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~s 61 (82)
T 3v7e_A 27 SVKEVVVAKDADPILTSSVVSLAEDQGISVSMVES 61 (82)
T ss_dssp CEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESC
T ss_pred CeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 47889998888888888888899999998877553
No 87
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=33.44 E-value=36 Score=28.13 Aligned_cols=52 Identities=12% Similarity=0.033 Sum_probs=37.7
Q ss_pred cccEEEEeCCCCHHHHHHHHHHHHhCCCcEEEeCCCCC-CCCchhhccCCcEEe
Q 023130 200 KAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMD-APIPQELLNFIDILS 252 (287)
Q Consensus 200 ~a~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~D~~~~~-~~~~~~ll~~~dil~ 252 (287)
.++++.+..+... .+.+.++.+|+.|+++.+..++.. .+.+++++..+|++.
T Consensus 109 GAd~itvH~Ea~~-~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~Vl 161 (246)
T 3inp_A 109 GATSIVFHPEASE-HIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVL 161 (246)
T ss_dssp TCSEEEECGGGCS-CHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEE
T ss_pred CCCEEEEccccch-hHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEE
Confidence 6899988765443 367888999999998877766432 345667888888874
No 88
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=33.42 E-value=34 Score=27.84 Aligned_cols=51 Identities=8% Similarity=0.038 Sum_probs=35.1
Q ss_pred ccEEEEeCCCCHHHHHHHHH---HHHhCCCcEEEeCCCCC-CCCchhhcc--CCcEE
Q 023130 201 AGIVLLQREIPDSVNIQVAK---AARSAGVPVIFDAGGMD-APIPQELLN--FIDIL 251 (287)
Q Consensus 201 a~~v~~~g~~~~~~~~~~~~---~a~~~g~~v~~D~~~~~-~~~~~~ll~--~~dil 251 (287)
++++.+..+...+...+.++ .++++|+++-++.++.. .+..++++. .+|++
T Consensus 86 Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp~~~~~~~l~~g~~D~V 142 (227)
T 1tqx_A 86 SNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTV 142 (227)
T ss_dssp SSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHHTTTCCSEE
T ss_pred CCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHhhcCCcCEE
Confidence 89887655433213455666 99999999888776432 345677888 89988
No 89
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=33.09 E-value=71 Score=23.27 Aligned_cols=44 Identities=18% Similarity=0.120 Sum_probs=30.8
Q ss_pred HHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCC
Q 023130 133 GKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGG 180 (287)
Q Consensus 133 G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~g 180 (287)
=+.+.+.|++.|+....-.... +.|+.+.+.|++|..-.+....
T Consensus 76 ~d~~~~~l~~~G~~v~~~p~~~----~~G~~~~~~DPdG~~iel~~~~ 119 (144)
T 3r6a_A 76 LDKFKTFLEENGAEIIRGPSKV----PTGRNMTVRHSDGSVIEYVEHS 119 (144)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEE----TTEEEEEEECTTSCEEEEEEEC
T ss_pred HHHHHHHHHHcCCEEecCCccC----CCceEEEEECCCCCEEEEEEcC
Confidence 3567889999999864332222 4568888999999886665543
No 90
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=31.81 E-value=2.1e+02 Score=23.38 Aligned_cols=155 Identities=10% Similarity=0.019 Sum_probs=74.2
Q ss_pred HHHHHHHHHcCCCcEEEE-eecCCchHHHHHHHHHhCCCCCCceEEccCCCCCCc-eEEEEEcCCCCeeEEEeCCCCCCC
Q 023130 108 ANQAACGAKLSHPTYFVG-QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTG-HAVVMLQSDGQNSIIIVGGTNMSC 185 (287)
Q Consensus 108 ~N~A~~la~LG~~~~lig-~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~~~T~-~~~v~i~~~Ger~~~~~~ga~~~~ 185 (287)
..+...+.+..-+..+-. -+=.| .+++ .+.+.+.|.|.-.+.... . .+. .++..+.+.|-+.-+.... ...
T Consensus 74 ~~~v~~lr~~~p~~~ldvHLmv~~-p~~~-i~~~~~aGAd~itvH~Ea--~-~~~~~~i~~ir~~G~k~Gvalnp-~Tp- 146 (246)
T 3inp_A 74 PMVLKALRDYGITAGMDVHLMVKP-VDAL-IESFAKAGATSIVFHPEA--S-EHIDRSLQLIKSFGIQAGLALNP-ATG- 146 (246)
T ss_dssp HHHHHHHHHHTCCSCEEEEEECSS-CHHH-HHHHHHHTCSEEEECGGG--C-SCHHHHHHHHHTTTSEEEEEECT-TCC-
T ss_pred HHHHHHHHHhCCCCeEEEEEeeCC-HHHH-HHHHHHcCCCEEEEcccc--c-hhHHHHHHHHHHcCCeEEEEecC-CCC-
Confidence 455666666541222222 22344 3444 466778888753333221 1 111 1222233345544333211 111
Q ss_pred CCcccCchhHhhhccccEEEEeCC--------CCHH---HHHHHHHHHHh--CCCcEEEeCCCCCCCCchhhc-cCCcEE
Q 023130 186 WPEKFGDEDLEVVKKAGIVLLQRE--------IPDS---VNIQVAKAARS--AGVPVIFDAGGMDAPIPQELL-NFIDIL 251 (287)
Q Consensus 186 ~~~~l~~~~~~~l~~a~~v~~~g~--------~~~~---~~~~~~~~a~~--~g~~v~~D~~~~~~~~~~~ll-~~~dil 251 (287)
.+.+ .+.+...|++++-+- +.++ -+.++-+...+ .+.++.+|.+-.. +-...+. ..+|++
T Consensus 147 -~e~l----~~~l~~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~-~ti~~~~~aGAD~~ 220 (246)
T 3inp_A 147 -IDCL----KYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNP-YNIAEIAVCGVNAF 220 (246)
T ss_dssp -SGGG----TTTGGGCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCT-TTHHHHHTTTCCEE
T ss_pred -HHHH----HHHHhcCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcCH-HHHHHHHHcCCCEE
Confidence 1222 234556788766331 1122 23333333333 3588999998553 4344444 569999
Q ss_pred ecCHHHHHhhcCCCCCCHHHHHHHHHHHhh
Q 023130 252 SPNESELGRLTGMPTDSYEQISEAVVKCHK 281 (287)
Q Consensus 252 ~~Ne~E~~~l~g~~~~~~~~~~~~~~~l~~ 281 (287)
..- ..+++. +++++.++..++..+
T Consensus 221 V~G----SaIf~a--~dp~~~i~~l~~~i~ 244 (246)
T 3inp_A 221 VAG----SAIFNS--DSYKQTIDKMRDELN 244 (246)
T ss_dssp EES----HHHHTS--SCHHHHHHHHHHHHH
T ss_pred EEe----hHHhCC--CCHHHHHHHHHHHHh
Confidence 887 357774 467666666655443
No 91
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=31.55 E-value=87 Score=26.90 Aligned_cols=62 Identities=16% Similarity=0.168 Sum_probs=43.9
Q ss_pred hHhhhccccEEEEeCCCCHHHHHHHHHHHHhCCCcEEEeCCCCCCCCchhhccCCcEEecCH
Q 023130 194 DLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNE 255 (287)
Q Consensus 194 ~~~~l~~a~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~ll~~~dil~~Ne 255 (287)
..+.++..++.++.-.++.+....+.+.+++.++||..|=+-........++..+|++.+.-
T Consensus 193 ~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~a~d~i~~k~ 254 (338)
T 3ijl_A 193 MIHWLKEKGIVMIEQPMPKEQLDDIAWVTQQSPLPVFADESLQRLGDVAALKGAFTGINIKL 254 (338)
T ss_dssp HHHHHHHTTEEEEECCSCTTCHHHHHHHHHTCSSCEEESTTCCSGGGTGGGBTTBSEEEECH
T ss_pred HHHHHhhCCCCEEECCCCCCcHHHHHHHHhcCCCCEEECCCCCCHHHHHHHHhhCCEEEecc
Confidence 44667788999998777654456666677778999999976543333445567889987654
No 92
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=29.03 E-value=1.7e+02 Score=24.22 Aligned_cols=41 Identities=17% Similarity=0.100 Sum_probs=26.6
Q ss_pred eecCchHHHHHHHHHHcCCCcEEEEeecCC-chHHHHHHHHHhC
Q 023130 101 TLAGGKGANQAACGAKLSHPTYFVGQVGED-ANGKLITDALSGC 143 (287)
Q Consensus 101 ~~~GG~a~N~A~~la~LG~~~~lig~vG~D-~~G~~i~~~L~~~ 143 (287)
.-.||.+.-++.+|+.+|.....|. ..+ .-.+.+.+.+...
T Consensus 131 lGaGGaarai~~aL~~~g~~~i~i~--nRt~~ra~~la~~~~~~ 172 (269)
T 3tum_A 131 IGCGGVGSAIAYALAEAGIASITLC--DPSTARMGAVCELLGNG 172 (269)
T ss_dssp ECCSHHHHHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHHHHH
T ss_pred EecHHHHHHHHHHHHHhCCCeEEEe--CCCHHHHHHHHHHHhcc
Confidence 4588988889999999997543333 333 2345566666544
No 93
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=28.77 E-value=1.3e+02 Score=21.36 Aligned_cols=42 Identities=19% Similarity=0.147 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEe
Q 023130 133 GKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIV 178 (287)
Q Consensus 133 G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~ 178 (287)
=+.+.+.|++.|+....-... ...+..+.+.|++|..--+..
T Consensus 109 ~~~~~~~l~~~G~~~~~~~~~----~~~g~~~~~~DPdG~~iel~~ 150 (156)
T 3kol_A 109 FDRAVTVIGENKIAIAHGPVT----RPTGRGVYFYDPDGFMIEIRC 150 (156)
T ss_dssp HHHHHHHHHHTTCCEEEEEEE----C-CCEEEEEECTTSCEEEEEE
T ss_pred HHHHHHHHHHCCCccccCcee----cCCccEEEEECCCCCEEEEEe
Confidence 466778999999986432222 255678888999998765544
No 94
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=28.57 E-value=1.3e+02 Score=24.22 Aligned_cols=52 Identities=13% Similarity=0.275 Sum_probs=31.3
Q ss_pred cccEEEEeC--CCCHHHHHHHHHHHHhCCCcEEE---eCC--CCCCCCchhhccCCcEEe
Q 023130 200 KAGIVLLQR--EIPDSVNIQVAKAARSAGVPVIF---DAG--GMDAPIPQELLNFIDILS 252 (287)
Q Consensus 200 ~a~~v~~~g--~~~~~~~~~~~~~a~~~g~~v~~---D~~--~~~~~~~~~ll~~~dil~ 252 (287)
..++|.++= .++++.+ +.++.....|++|++ |.. .........|++.+|.+.
T Consensus 101 ~~dvViIDEaQF~~~~~V-~~l~~l~~~~~~Vi~~Gl~~DF~~~~F~~~~~Ll~~AD~Vt 159 (214)
T 2j9r_A 101 EMDVIAIDEVQFFDGDIV-EVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVT 159 (214)
T ss_dssp SCCEEEECCGGGSCTTHH-HHHHHHHHTTCEEEEEECSBCTTSCBCTTHHHHHHHCSEEE
T ss_pred CCCEEEEECcccCCHHHH-HHHHHHhhCCCEEEEEecccccccCccccHHHHHHhcccEE
Confidence 478888862 2334444 556664556988887 322 222344577888888774
No 95
>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}
Probab=28.47 E-value=1e+02 Score=22.35 Aligned_cols=46 Identities=13% Similarity=-0.048 Sum_probs=32.0
Q ss_pred chHHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCC
Q 023130 131 ANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGG 180 (287)
Q Consensus 131 ~~G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~g 180 (287)
..=+.+.+.|++.|+....-.... +.|+.+.+.|++|.+-.+....
T Consensus 79 ~dvd~~~~~l~~~G~~i~~~p~~~----~~G~~~~~~DPdG~~iel~~~~ 124 (148)
T 3rhe_A 79 EMVDEIHRQWSDKEISIIQPPTQM----DFGYTFVGVDPDEHRLRIFCLK 124 (148)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEE----TTEEEEEEECTTCCEEEEEEEC
T ss_pred HHHHHHHHHHHhCCCEEEeCCeec----CCCcEEEEECCCCCEEEEEEcC
Confidence 345778889999999874322222 4468888999999886665543
No 96
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=27.99 E-value=2.7e+02 Score=24.21 Aligned_cols=37 Identities=16% Similarity=0.145 Sum_probs=29.0
Q ss_pred hccccEEEEeCCCCHHHHHHHHHHHHhCCC-cEEEeCCCC
Q 023130 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGV-PVIFDAGGM 236 (287)
Q Consensus 198 l~~a~~v~~~g~~~~~~~~~~~~~a~~~g~-~v~~D~~~~ 236 (287)
+..+|+++++ .+.....+.+..+.+.|+ .+++|.++.
T Consensus 63 ~~~~DvVf~a--~g~~~s~~~a~~~~~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 63 LKALDIIVTC--QGGDYTNEIYPKLRESGWQGYWIDAASS 100 (367)
T ss_dssp HHTCSEEEEC--SCHHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred hcCCCEEEEC--CCchhHHHHHHHHHHCCCCEEEEcCChh
Confidence 5689999885 456667888888888897 489998764
No 97
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=27.91 E-value=1.4e+02 Score=24.01 Aligned_cols=52 Identities=15% Similarity=0.137 Sum_probs=32.2
Q ss_pred ccccEEEEeC--CCCHHHHHHHHHHHHhCCCcEEE---eCCCC--CCCCchhhccCCcEE
Q 023130 199 KKAGIVLLQR--EIPDSVNIQVAKAARSAGVPVIF---DAGGM--DAPIPQELLNFIDIL 251 (287)
Q Consensus 199 ~~a~~v~~~g--~~~~~~~~~~~~~a~~~g~~v~~---D~~~~--~~~~~~~ll~~~dil 251 (287)
.+.++|.++- .++++.+..+.+.+ ..|++|++ |.... ..+....+++.+|.+
T Consensus 100 ~~~dvV~IDEaQFf~~~~v~~l~~la-~~gi~Vi~~GLd~DF~~~~F~~~~~Ll~~Ad~v 158 (219)
T 3e2i_A 100 TNVDVIGIDEVQFFDDEIVSIVEKLS-ADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQV 158 (219)
T ss_dssp TTCSEEEECCGGGSCTHHHHHHHHHH-HTTCEEEEEEESBCTTSCBCTTHHHHHHHCSEE
T ss_pred cCCCEEEEechhcCCHHHHHHHHHHH-HCCCEEEEeecccccccCCCccHHHHHHhcceE
Confidence 4578888863 24555555555556 68999876 44333 234456677777765
No 98
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=27.86 E-value=1.2e+02 Score=21.26 Aligned_cols=43 Identities=7% Similarity=0.031 Sum_probs=29.7
Q ss_pred hHHHHHHHHHh---CCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEe
Q 023130 132 NGKLITDALSG---CGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIV 178 (287)
Q Consensus 132 ~G~~i~~~L~~---~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~ 178 (287)
.=+.+.+.|++ .|+....-.... +.|+.+.+.|++|.+-.+..
T Consensus 85 dv~~~~~~l~~~~~~G~~~~~~p~~~----~~g~~~~~~DPdGn~iel~~ 130 (132)
T 3sk2_A 85 DVDKLFNEWTKQKSHQIIVIKEPYTD----VFGRTFLISDPDGHIIRVCP 130 (132)
T ss_dssp HHHHHHHHHHHCSSSCCEEEEEEEEE----TTEEEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHHhhhcCCCEEeeCCccc----CceEEEEEECCCCCEEEEEe
Confidence 35678889999 999864322222 45688889999998765543
No 99
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=27.80 E-value=49 Score=27.36 Aligned_cols=20 Identities=10% Similarity=-0.067 Sum_probs=16.2
Q ss_pred hHHHHHHHHHHcCCCcEEEE
Q 023130 106 KGANQAACGAKLSHPTYFVG 125 (287)
Q Consensus 106 ~a~N~A~~la~LG~~~~lig 125 (287)
+|..+|..|+++|.++.++-
T Consensus 15 AGl~AA~~la~~g~~v~liE 34 (314)
T 4a5l_A 15 AAHTAAIYLGRSSLKPVMYE 34 (314)
T ss_dssp HHHHHHHHHHHTTCCCEEEC
T ss_pred HHHHHHHHHHHCCCCEEEEe
Confidence 34677889999999998884
No 100
>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}
Probab=27.56 E-value=1.4e+02 Score=21.82 Aligned_cols=49 Identities=8% Similarity=0.058 Sum_probs=33.4
Q ss_pred ecCCchHHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeC
Q 023130 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVG 179 (287)
Q Consensus 127 vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ 179 (287)
|.+...=+.+.+.|++.|+....-.... ..++.+.+.|++|.+-.+..+
T Consensus 84 V~~~~dld~~~~~l~~~G~~~~~~~~~~----~g~~~~~~~DPdG~~iel~~~ 132 (160)
T 3r4q_A 84 ADDKAEVDEWKTRFEALEIPVEHYHRWP----NGSYSVYIRDPAGNSVEVGEG 132 (160)
T ss_dssp ESSHHHHHHHHHHHHTTTCCCCEEEECT----TSCEEEEEECTTCCEEEEEEG
T ss_pred eCCHHHHHHHHHHHHHCCCEEecccccc----CCcEEEEEECCCCCEEEEEeC
Confidence 4333345778889999999876332222 357788889999988666554
No 101
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=27.27 E-value=53 Score=26.64 Aligned_cols=53 Identities=17% Similarity=0.051 Sum_probs=37.3
Q ss_pred ccccEEEEeCCCCHHHHHHHHHHHHhCCCcEEEeCCCCC-CCCchhhccCCcEEe
Q 023130 199 KKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMD-APIPQELLNFIDILS 252 (287)
Q Consensus 199 ~~a~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~D~~~~~-~~~~~~ll~~~dil~ 252 (287)
..++++.+..+... ...+.++.++++|+++.+..++.. .+.+++++..+|++.
T Consensus 86 aGad~itvH~Ea~~-~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl 139 (228)
T 3ovp_A 86 AGANQYTFHLEATE-NPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMAL 139 (228)
T ss_dssp HTCSEEEEEGGGCS-CHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEE
T ss_pred cCCCEEEEccCCch-hHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEE
Confidence 36899988765433 367888999999998877766432 234567777888774
No 102
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=27.15 E-value=1.8e+02 Score=21.15 Aligned_cols=82 Identities=24% Similarity=0.378 Sum_probs=46.5
Q ss_pred EEEeecC----CchHHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhh
Q 023130 123 FVGQVGE----DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVV 198 (287)
Q Consensus 123 lig~vG~----D~~G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l 198 (287)
=|+.+|- +..|..+.+.|.+.|.+ -..+.+ ....+ .|.+ ...+..++ .
T Consensus 16 ~IavIGaS~~~g~~G~~~~~~L~~~G~~--V~~vnp-----~~~~i-----~G~~---------~~~s~~el-------~ 67 (138)
T 1y81_A 16 KIALVGASKNPAKYGNIILKDLLSKGFE--VLPVNP-----NYDEI-----EGLK---------CYRSVREL-------P 67 (138)
T ss_dssp EEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECT-----TCSEE-----TTEE---------CBSSGGGS-------C
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHCCCE--EEEeCC-----CCCeE-----CCee---------ecCCHHHh-------C
Confidence 3566665 67899999999998875 122222 21111 1211 11111222 2
Q ss_pred ccccEEEEeCCCCHHHHHHHHHHHHhCCCc-EEEeCC
Q 023130 199 KKAGIVLLQREIPDSVNIQVAKAARSAGVP-VIFDAG 234 (287)
Q Consensus 199 ~~a~~v~~~g~~~~~~~~~~~~~a~~~g~~-v~~D~~ 234 (287)
+..|++++. .|.+...++++.+.+.|++ ++++++
T Consensus 68 ~~vDlvii~--vp~~~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 68 KDVDVIVFV--VPPKVGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp TTCCEEEEC--SCHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred CCCCEEEEE--eCHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 357888874 4566677778777777765 445554
No 103
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=26.91 E-value=1e+02 Score=21.62 Aligned_cols=32 Identities=25% Similarity=0.416 Sum_probs=26.0
Q ss_pred cccEEEEeCCCCHHHHHHHHHHHHhCCCcEEE
Q 023130 200 KAGIVLLQREIPDSVNIQVAKAARSAGVPVIF 231 (287)
Q Consensus 200 ~a~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~ 231 (287)
.+.+|++....|.+....+-..|+++++|++.
T Consensus 37 ka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~ 68 (110)
T 3cpq_A 37 EGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQ 68 (110)
T ss_dssp CCSEEEECTTCBHHHHHHHHHHHHHTTCCEEE
T ss_pred CceEEEEeCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 47888888888888888888888888988654
No 104
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=26.83 E-value=1.3e+02 Score=20.61 Aligned_cols=34 Identities=15% Similarity=0.269 Sum_probs=28.4
Q ss_pred ccccEEEEeCCCCHHHHHHHHHHHHhCCCcEEEe
Q 023130 199 KKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD 232 (287)
Q Consensus 199 ~~a~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~D 232 (287)
..+.+|++....|++...++...|+++++|++.-
T Consensus 30 gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 30 GGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp TCCSEEEEECCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCccEEEEeCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 3588999988888888888989999999997543
No 105
>2dha_A FLJ20171 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.82 E-value=85 Score=22.54 Aligned_cols=44 Identities=11% Similarity=-0.000 Sum_probs=34.0
Q ss_pred ecCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCC
Q 023130 102 LAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGV 145 (287)
Q Consensus 102 ~~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gV 145 (287)
..||..-.+...+.+-...+.+|+.+.-+..-+.|++.+...|.
T Consensus 6 ~~~g~~~~~~~~~~~~~~~~v~V~nLp~~~te~dl~~~F~~~g~ 49 (123)
T 2dha_A 6 SGGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFFGQHCP 49 (123)
T ss_dssp SSCCCCHHHHHHHHCCSCCEEEECSCCTTCCHHHHHHHHHTTSC
T ss_pred CCCCCchhHHhhccCCCCCEEEEeCCCCCCCHHHHHHHHHhhCC
Confidence 45666555555666555578999999999899999999999983
No 106
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=26.56 E-value=1.3e+02 Score=20.42 Aligned_cols=40 Identities=20% Similarity=0.209 Sum_probs=27.2
Q ss_pred HHHHHHHHHhCCCCCCceEEccCCCCCCc-eEEEEEcCCCCeeEE
Q 023130 133 GKLITDALSGCGVRLDYMNVVKDGGVPTG-HAVVMLQSDGQNSII 176 (287)
Q Consensus 133 G~~i~~~L~~~gVd~~~v~~~~~~~~~T~-~~~v~i~~~Ger~~~ 176 (287)
=+.+.+.|++.|+....-.... +.+ +.+.+.|++|.+--+
T Consensus 85 v~~~~~~l~~~G~~~~~~~~~~----~~g~~~~~~~DPdG~~iel 125 (127)
T 3e5d_A 85 VDELTEKLRQDGFAIAGEPRMT----GDGYYESVVLDPEGNRIEI 125 (127)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEC----TTSCEEEEEECTTSCEEEE
T ss_pred HHHHHHHHHHcCCeEecCcccC----CCCcEEEEEECCCCCEEEE
Confidence 4578889999999875432222 333 567788999987544
No 107
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=26.50 E-value=48 Score=27.57 Aligned_cols=21 Identities=10% Similarity=0.104 Sum_probs=17.0
Q ss_pred hHHHHHHHHHHcCCCcEEEEe
Q 023130 106 KGANQAACGAKLSHPTYFVGQ 126 (287)
Q Consensus 106 ~a~N~A~~la~LG~~~~lig~ 126 (287)
.|..+|..|+|.|.++.++-.
T Consensus 17 AGlsAA~~lar~g~~v~lie~ 37 (304)
T 4fk1_A 17 AGLNASLVLGRARKQIALFDN 37 (304)
T ss_dssp HHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHHCCCCEEEEeC
Confidence 346778899999999999863
No 108
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=26.14 E-value=1.5e+02 Score=24.74 Aligned_cols=24 Identities=25% Similarity=0.311 Sum_probs=18.4
Q ss_pred EEeec-CCchHHHHHHHHHhCCCCC
Q 023130 124 VGQVG-EDANGKLITDALSGCGVRL 147 (287)
Q Consensus 124 ig~vG-~D~~G~~i~~~L~~~gVd~ 147 (287)
|+.+| -...|..+...|.+.|.++
T Consensus 24 I~iIGg~G~mG~~la~~l~~~G~~V 48 (298)
T 2pv7_A 24 IVIVGGYGKLGGLFARYLRASGYPI 48 (298)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCE
T ss_pred EEEEcCCCHHHHHHHHHHHhCCCeE
Confidence 56666 7778888888888888754
No 109
>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2
Probab=25.90 E-value=1.5e+02 Score=19.87 Aligned_cols=41 Identities=15% Similarity=0.214 Sum_probs=27.8
Q ss_pred HHHHHHHHHhCCCCCCceEEccCCCCCCc-eEEEEEcCCCCeeEEE
Q 023130 133 GKLITDALSGCGVRLDYMNVVKDGGVPTG-HAVVMLQSDGQNSIII 177 (287)
Q Consensus 133 G~~i~~~L~~~gVd~~~v~~~~~~~~~T~-~~~v~i~~~Ger~~~~ 177 (287)
=+.+.+.|++.|+....-.... +.| +...+.|++|..-.+.
T Consensus 75 ~~~~~~~l~~~G~~~~~~~~~~----~~g~~~~~~~DPdG~~iel~ 116 (119)
T 2pjs_A 75 FDEVHARILKAGLPIEYGPVTE----AWGVQRLFLRDPFGKLINIL 116 (119)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEC----TTSCEEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHHCCCccccCCccC----CCccEEEEEECCCCCEEEEE
Confidence 4567789999999875433322 344 6777889999875543
No 110
>2lkz_A RNA-binding protein 5; RRM; NMR {Homo sapiens}
Probab=25.38 E-value=84 Score=21.32 Aligned_cols=37 Identities=16% Similarity=0.220 Sum_probs=29.9
Q ss_pred CCCcEEEEeecCCchHHHHHHHHHhCC-CCCCceEEcc
Q 023130 118 SHPTYFVGQVGEDANGKLITDALSGCG-VRLDYMNVVK 154 (287)
Q Consensus 118 G~~~~lig~vG~D~~G~~i~~~L~~~g-Vd~~~v~~~~ 154 (287)
+.++.+|+.+..+..-+.|++.+.+.| +....+++..
T Consensus 8 ~m~tlfV~nL~~~~tee~L~~~F~~~G~i~v~~v~i~~ 45 (95)
T 2lkz_A 8 HMDTIILRNIAPHTVVDSIMTALSPYASLAVNNIRLIK 45 (95)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHSTTTCCCCGGGEECCC
T ss_pred ccCEEEEeCCCCcCCHHHHHHHHHhhCCccEEEEEEEe
Confidence 467899999999999999999999998 4555565544
No 111
>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}
Probab=24.79 E-value=1.2e+02 Score=21.68 Aligned_cols=42 Identities=12% Similarity=-0.045 Sum_probs=28.8
Q ss_pred HHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeC
Q 023130 134 KLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVG 179 (287)
Q Consensus 134 ~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ 179 (287)
+.+.+.+.+.|+....-..+. +.+++..+.|+||.+--+.+.
T Consensus 92 d~~~~~~~~~g~~~~~~p~~~----~~~~~~~f~DPDGn~iEi~~~ 133 (149)
T 4gym_A 92 DRFADTALGAGGTVARDPMDY----GFMYGRSFHDLDGHLWEVMWM 133 (149)
T ss_dssp HHHHHHHHHTTCEECSCCEEC----SSEEEEEEECTTCCEEEEEEE
T ss_pred HHHHHHHHhcCceeecccccc----CCEEEEEEEcCCCCEEEEEEE
Confidence 567778888887754322222 457788899999998666553
No 112
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=24.77 E-value=93 Score=25.57 Aligned_cols=48 Identities=15% Similarity=0.197 Sum_probs=35.8
Q ss_pred cCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCCCceEE
Q 023130 103 AGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNV 152 (287)
Q Consensus 103 ~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~~~v~~ 152 (287)
.||-|..+|..+++.|.++.+++. +....+.+.+.+++.|.....+..
T Consensus 41 s~GIG~aia~~la~~G~~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~ 88 (276)
T 3r1i_A 41 STGIGKKVALAYAEAGAQVAVAAR--HSDALQVVADEIAGVGGKALPIRC 88 (276)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEES--SGGGGHHHHHHHHHTTCCCEEEEC
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHHHHhcCCeEEEEEc
Confidence 478889999999999999888776 223457778888887766554443
No 113
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=24.58 E-value=2.1e+02 Score=23.16 Aligned_cols=38 Identities=11% Similarity=0.232 Sum_probs=31.5
Q ss_pred ccccEEEEeCCC--CHHHHHHHHHHHHhCCCcEEEeCCCC
Q 023130 199 KKAGIVLLQREI--PDSVNIQVAKAARSAGVPVIFDAGGM 236 (287)
Q Consensus 199 ~~a~~v~~~g~~--~~~~~~~~~~~a~~~g~~v~~D~~~~ 236 (287)
..+|.+.+.|+. ..+.+.++++..|+.+.|+++-|+..
T Consensus 30 ~GtD~i~vGGs~gvt~~~~~~~v~~ik~~~~Pvvlfp~~~ 69 (228)
T 3vzx_A 30 SGTDAVIIGGSDGVTEDNVLRMMSKVRRFLVPCVLEVSAI 69 (228)
T ss_dssp SSCSEEEECCCSCCCHHHHHHHHHHHTTSSSCEEEECSCG
T ss_pred cCCCEEEECCcCCCCHHHHHHHHHHhhccCCCEEEeCCCH
Confidence 458999998864 56778899999988999999999763
No 114
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=24.39 E-value=1.6e+02 Score=20.95 Aligned_cols=42 Identities=14% Similarity=0.079 Sum_probs=31.9
Q ss_pred hHhhhccccEEEEeCCCCHHHHHHHHHHHHhCCCcEEEeCCC
Q 023130 194 DLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGG 235 (287)
Q Consensus 194 ~~~~l~~a~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~D~~~ 235 (287)
.++...+-+++++-..-..+.+...++.|+++|+.+.+-.+.
T Consensus 71 iwerypqldvvvivttddkewikdfieeakergvevfvvynn 112 (162)
T 2l82_A 71 IWERYPQLDVVVIVTTDDKEWIKDFIEEAKERGVEVFVVYNN 112 (162)
T ss_dssp HHHHCTTCCEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHhCCCCcEEEEEecCcHHHHHHHHHHHHhcCcEEEEEecC
Confidence 445556678887766667788999999999999987765544
No 115
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=24.21 E-value=2.1e+02 Score=20.84 Aligned_cols=17 Identities=18% Similarity=0.229 Sum_probs=14.5
Q ss_pred CchHHHHHHHHHhCCCC
Q 023130 130 DANGKLITDALSGCGVR 146 (287)
Q Consensus 130 D~~G~~i~~~L~~~gVd 146 (287)
+..|..+.+.|.+.|.+
T Consensus 26 g~~G~~~~~~l~~~G~~ 42 (140)
T 1iuk_A 26 SRPAHYVPRYLREQGYR 42 (140)
T ss_dssp TSHHHHHHHHHHHTTCE
T ss_pred CChHHHHHHHHHHCCCE
Confidence 46899999999999875
No 116
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=24.17 E-value=78 Score=25.58 Aligned_cols=48 Identities=13% Similarity=0.009 Sum_probs=35.4
Q ss_pred cCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCCCceEE
Q 023130 103 AGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNV 152 (287)
Q Consensus 103 ~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~~~v~~ 152 (287)
.||-|..+|..+++.|.++.+++.- ....+.+.+.+++.|.....+..
T Consensus 16 s~GIG~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~ 63 (252)
T 3h7a_A 16 GDYIGAEIAKKFAAEGFTVFAGRRN--GEKLAPLVAEIEAAGGRIVARSL 63 (252)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEESS--GGGGHHHHHHHHHTTCEEEEEEC
T ss_pred CchHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCeEEEEEC
Confidence 4677899999999999998887762 23466778888887766554443
No 117
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=24.13 E-value=83 Score=25.82 Aligned_cols=44 Identities=16% Similarity=-0.018 Sum_probs=30.4
Q ss_pred ecCchHHHHHHHHHHcCCCcEEEEeecC-C--chHHHHHHHHHhCCCC
Q 023130 102 LAGGKGANQAACGAKLSHPTYFVGQVGE-D--ANGKLITDALSGCGVR 146 (287)
Q Consensus 102 ~~GG~a~N~A~~la~LG~~~~lig~vG~-D--~~G~~i~~~L~~~gVd 146 (287)
.=||.|+-+|+.|+..|.+|.++- ++. . ...+..++.+++.|+.
T Consensus 69 NNGGDGlv~AR~L~~~G~~V~v~~-~~~~~~~~~~~~~~~~~~~~g~~ 115 (246)
T 1jzt_A 69 NNGGDGLVCARHLKLFGYNPVVFY-PKRSERTEFYKQLVHQLNFFKVP 115 (246)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEC-CCCCTTCHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHCCCeEEEEE-cCCCCCCHHHHHHHHHHHHcCCc
Confidence 468999999999999999988763 333 1 2234445666666654
No 118
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=24.08 E-value=53 Score=27.41 Aligned_cols=23 Identities=17% Similarity=0.248 Sum_probs=17.9
Q ss_pred CchHHHHHHHHHHcCCCcEEEEe
Q 023130 104 GGKGANQAACGAKLSHPTYFVGQ 126 (287)
Q Consensus 104 GG~a~N~A~~la~LG~~~~lig~ 126 (287)
|-.|..+|..|++.|.++.++-+
T Consensus 17 G~aGl~aA~~l~~~g~~v~lie~ 39 (325)
T 2q7v_A 17 GPAGLTAAIYTGRAQLSTLILEK 39 (325)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEES
T ss_pred CHHHHHHHHHHHHcCCcEEEEeC
Confidence 34567788888999999888865
No 119
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=23.91 E-value=2.3e+02 Score=22.06 Aligned_cols=25 Identities=16% Similarity=0.223 Sum_probs=20.1
Q ss_pred EEEeecCCchHHHHHHHHHhCCCCC
Q 023130 123 FVGQVGEDANGKLITDALSGCGVRL 147 (287)
Q Consensus 123 lig~vG~D~~G~~i~~~L~~~gVd~ 147 (287)
-++.+|-...|..+...|.+.|.++
T Consensus 21 ~I~iiG~G~mG~~la~~l~~~g~~V 45 (209)
T 2raf_A 21 EITIFGKGNMGQAIGHNFEIAGHEV 45 (209)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEE
Confidence 3667777789999999999988654
No 120
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=23.79 E-value=1.5e+02 Score=20.35 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=24.6
Q ss_pred cccEEEEeCCCCHHHHHHHHHHHHhCCCcEEEe
Q 023130 200 KAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD 232 (287)
Q Consensus 200 ~a~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~D 232 (287)
.+.+|++....++.....+...|+.+++|+++-
T Consensus 35 ka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~ 67 (101)
T 3v7q_A 35 RAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKV 67 (101)
T ss_dssp CCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred ceeEEEEeccccccchhhhcccccccCCCeeee
Confidence 477888887777777777777788878776554
No 121
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=23.77 E-value=1.1e+02 Score=20.95 Aligned_cols=32 Identities=22% Similarity=0.390 Sum_probs=25.1
Q ss_pred cccEEEEeCCCCHHHHHHHHHHHHhCCCcEEE
Q 023130 200 KAGIVLLQREIPDSVNIQVAKAARSAGVPVIF 231 (287)
Q Consensus 200 ~a~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~ 231 (287)
.+.+|++....|.+....+-..|+++++|++.
T Consensus 32 ka~lViiA~D~~~~~~~~l~~~c~~~~vp~~~ 63 (101)
T 1w41_A 32 GAKLIIVARNARPDIKEDIEYYARLSGIPVYE 63 (101)
T ss_dssp CCSEEEEETTSCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 47788888777888788888888888888654
No 122
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=23.58 E-value=66 Score=25.19 Aligned_cols=56 Identities=21% Similarity=0.111 Sum_probs=36.3
Q ss_pred ccccEEEEeCCCCHHHHHHHHHHHHhCCCcEEEeCCCCCC--CCchhhcc-CCcEEecC
Q 023130 199 KKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDA--PIPQELLN-FIDILSPN 254 (287)
Q Consensus 199 ~~a~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~--~~~~~ll~-~~dil~~N 254 (287)
..++.+.+......+.+.++++.++++|.++.++....+. +..+.+.. .+|++..+
T Consensus 76 ~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 76 AGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp TTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEE
T ss_pred cCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEc
Confidence 3578888876655566788888899999999888433221 11233443 37877654
No 123
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=23.54 E-value=1.2e+02 Score=21.28 Aligned_cols=43 Identities=14% Similarity=0.069 Sum_probs=28.1
Q ss_pred HHHHHHHHHhCCCC-CCceEEccCCCCCCceEEEEEcCCCCeeEEEeC
Q 023130 133 GKLITDALSGCGVR-LDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVG 179 (287)
Q Consensus 133 G~~i~~~L~~~gVd-~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ 179 (287)
=+...+.|++.|+. ...-... .+.|....+.|++|.+-.+...
T Consensus 77 vd~~~~~l~~~G~~~~~~~p~~----~~~G~~~~~~DPdGn~iel~~~ 120 (128)
T 3g12_A 77 LEKTVQELVKIPGAMCILDPTD----MPDGKKAIVLDPDGHSIELCEL 120 (128)
T ss_dssp HHHHHHHHTTSTTCEEEEEEEE----CC-CEEEEEECTTCCEEEEEC-
T ss_pred HHHHHHHHHHCCCceeccCcee----CCCccEEEEECCCCCEEEEEEe
Confidence 46778899999998 4322222 2456668889999988655544
No 124
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=23.43 E-value=1.2e+02 Score=20.95 Aligned_cols=33 Identities=15% Similarity=0.188 Sum_probs=25.0
Q ss_pred cccEEEEeCCCCHHHHHHHHHHHHhCCCcEEEe
Q 023130 200 KAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD 232 (287)
Q Consensus 200 ~a~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~D 232 (287)
.+.+|++....++.....+...|+.+++|+++-
T Consensus 34 ka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~ 66 (101)
T 3on1_A 34 QVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVV 66 (101)
T ss_dssp CCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 578888888887777777777788888877653
No 125
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=23.11 E-value=49 Score=25.47 Aligned_cols=36 Identities=19% Similarity=0.325 Sum_probs=0.0
Q ss_pred CCcEEEEeecC-------------CchHHHHHHHHHhCCCCCCceEEccCCC
Q 023130 119 HPTYFVGQVGE-------------DANGKLITDALSGCGVRLDYMNVVKDGG 157 (287)
Q Consensus 119 ~~~~lig~vG~-------------D~~G~~i~~~L~~~gVd~~~v~~~~~~~ 157 (287)
.++.+|+ +|+ |..|.+|.+.|++.|+++....+.+ +
T Consensus 16 ~~v~iit-vsd~~~~~~~~~g~i~D~ng~~L~~~L~~~G~~v~~~~iV~--D 64 (178)
T 3iwt_A 16 LNFYVIT-ISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVP--D 64 (178)
T ss_dssp CEEEEEE-ECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEEC--S
T ss_pred CEEEEEE-EcCCCccccccCCCCCcchHHHHHHHHHHCCCEEEEEEEeC--C
No 126
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=23.10 E-value=83 Score=28.37 Aligned_cols=22 Identities=23% Similarity=0.231 Sum_probs=19.0
Q ss_pred CchHHHHHHHHHHcCCCcEEEE
Q 023130 104 GGKGANQAACGAKLSHPTYFVG 125 (287)
Q Consensus 104 GG~a~N~A~~la~LG~~~~lig 125 (287)
|-.|..+|..+++.|.+|.++.
T Consensus 10 G~AG~~AA~~la~~G~~V~liE 31 (443)
T 3g5s_A 10 GLAGSEAAWTLLRLGVPVRLFE 31 (443)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEC
T ss_pred hHHHHHHHHHHHHCCCcEEEEe
Confidence 4457889999999999999996
No 127
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=22.95 E-value=27 Score=31.78 Aligned_cols=60 Identities=17% Similarity=0.124 Sum_probs=43.1
Q ss_pred hhccccEEEEeCC-CCHHHHHHHHHHHHhCCCcEEEeCCCCCCCCchhhccCCcEEecCHHH
Q 023130 197 VVKKAGIVLLQRE-IPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESE 257 (287)
Q Consensus 197 ~l~~a~~v~~~g~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~ll~~~dil~~Ne~E 257 (287)
....||.+++... ++.+.+.++++.|++.|..+.++.+.. .+....+--.+|++-.|...
T Consensus 127 ~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lgm~~LvEvh~~-eE~~~A~~lga~iIGinnr~ 187 (452)
T 1pii_A 127 RYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNE-EEQERAIALGAKVVGINNRD 187 (452)
T ss_dssp HHTTCSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEEECSH-HHHHHHHHTTCSEEEEESEE
T ss_pred HHcCCCEEEEEcccCCHHHHHHHHHHHHHcCCeEEEEeCCH-HHHHHHHHCCCCEEEEeCCC
Confidence 3567899887654 456679999999999999999999754 23223334467788777544
No 128
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=22.65 E-value=1.8e+02 Score=19.63 Aligned_cols=40 Identities=13% Similarity=0.145 Sum_probs=27.0
Q ss_pred HHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeE
Q 023130 133 GKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSI 175 (287)
Q Consensus 133 G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~ 175 (287)
=+.+.+.|++.|+......... ......+.+.|++|..-.
T Consensus 92 ~~~~~~~l~~~G~~~~~~~~~~---~~g~~~~~~~DPdG~~ie 131 (134)
T 3l7t_A 92 VEASRQELIALGIRVEEVRYDD---YTGKKMAFFFDPDGLPLE 131 (134)
T ss_dssp HHHHHHHHHHHTCCCCCCEECT---TSCCEEEEEECTTCCEEE
T ss_pred HHHHHHHHHhCCCcccceeccC---CCceEEEEEECCCCCEEE
Confidence 3567889999999876544432 123466777899997643
No 129
>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A
Probab=22.63 E-value=1.8e+02 Score=19.89 Aligned_cols=52 Identities=10% Similarity=-0.009 Sum_probs=30.8
Q ss_pred EEeecCCchHHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeC
Q 023130 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVG 179 (287)
Q Consensus 124 ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ 179 (287)
++..-+| =+.+.+.|++.|+....-.... ....++...+.|++|.+-.+...
T Consensus 75 ~~~~v~d--~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~DPdG~~iel~~~ 126 (135)
T 1f9z_A 75 IALSVDN--AAEACEKIRQNGGNVTREAGPV--KGGTTVIAFVEDPDGYKIELIEE 126 (135)
T ss_dssp EEEECSC--HHHHHHHHHHTTCEEEEEEEEC--TTSCCEEEEEECTTSCEEEEEEC
T ss_pred EEEEeCC--HHHHHHHHHHCCCEEecCCccC--CCCceeEEEEECCCCCEEEEEec
Confidence 3433345 3567889999999864322221 11223456778999987665543
No 130
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=22.62 E-value=1.6e+02 Score=20.89 Aligned_cols=41 Identities=12% Similarity=0.050 Sum_probs=28.0
Q ss_pred HHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEE
Q 023130 133 GKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSII 176 (287)
Q Consensus 133 G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~ 176 (287)
=+.+.+.|++.|+......... ...+..+.+.|++|.+--+
T Consensus 98 ld~~~~~l~~~G~~~~~~~~~~---~~~~~~~~~~DPdG~~iel 138 (141)
T 3ghj_A 98 IEPLKKALESKGVSVHGPVNQE---WMQAVSLYFADPNGHALEF 138 (141)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEG---GGTEEEEEEECTTCCEEEE
T ss_pred HHHHHHHHHHCCCeEeCCcccC---CCCceEEEEECCCCCEEEE
Confidence 4668889999999976332222 1245778888999987544
No 131
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=22.55 E-value=39 Score=24.11 Aligned_cols=40 Identities=30% Similarity=0.405 Sum_probs=31.5
Q ss_pred cCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCC
Q 023130 103 AGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRL 147 (287)
Q Consensus 103 ~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~ 147 (287)
.+|.+...+..++..|.++.+++.+| ....+.|++.||.+
T Consensus 52 ~~g~g~~~~~~l~~~gv~~vi~~~iG-----~~a~~~L~~~GI~v 91 (120)
T 2wfb_A 52 SHGAGINAAQVLAKSGAGVLLTGYVG-----PKAFQALQAAGIKV 91 (120)
T ss_dssp SSCHHHHHHHHHHHHTEEEEECSCCC-----HHHHHHHHHTTCEE
T ss_pred CCCchHHHHHHHHHCCCCEEEECCCC-----HhHHHHHHHCCCEE
Confidence 46666778888888899999988764 45678899999985
No 132
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=22.53 E-value=96 Score=27.17 Aligned_cols=24 Identities=21% Similarity=0.115 Sum_probs=18.7
Q ss_pred cCchHHHHHHHHHHcCC-CcEEEEe
Q 023130 103 AGGKGANQAACGAKLSH-PTYFVGQ 126 (287)
Q Consensus 103 ~GG~a~N~A~~la~LG~-~~~lig~ 126 (287)
.|-.|.-+|..|++.|. +|.++-+
T Consensus 14 gG~aGlsaA~~La~~G~~~V~vlE~ 38 (438)
T 3dje_A 14 AGTWGTSTALHLARRGYTNVTVLDP 38 (438)
T ss_dssp CSHHHHHHHHHHHHTTCCCEEEEES
T ss_pred CCHHHHHHHHHHHHcCCCcEEEEeC
Confidence 45567888899999999 8888853
No 133
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=22.40 E-value=2e+02 Score=25.34 Aligned_cols=26 Identities=8% Similarity=0.068 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEeCCC
Q 023130 210 IPDSVNIQVAKAARSAGVPVIFDAGG 235 (287)
Q Consensus 210 ~~~~~~~~~~~~a~~~g~~v~~D~~~ 235 (287)
.+.+...++++.|+++|+.+++|-.+
T Consensus 219 ~~~~~l~~i~~l~~~~~~~li~Deay 244 (448)
T 3meb_A 219 FTEAQWKELLPIMKEKKHIAFFDSAY 244 (448)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEEESC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEeccc
Confidence 34566788889999999999998753
No 134
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=22.16 E-value=1.1e+02 Score=24.62 Aligned_cols=52 Identities=13% Similarity=0.031 Sum_probs=37.2
Q ss_pred ccccEEEEeCC--CCHHHHHHHHHHHHhCCCcEEEeCCCCC-CCCchhhccCCcEE
Q 023130 199 KKAGIVLLQRE--IPDSVNIQVAKAARSAGVPVIFDAGGMD-APIPQELLNFIDIL 251 (287)
Q Consensus 199 ~~a~~v~~~g~--~~~~~~~~~~~~a~~~g~~v~~D~~~~~-~~~~~~ll~~~dil 251 (287)
..++.+++..+ .. +...+.++.++++|+.+.+..++.. .+..+.++..+|++
T Consensus 84 aGadgv~vh~e~~~~-~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v 138 (230)
T 1tqj_A 84 AGADIISVHVEHNAS-PHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLI 138 (230)
T ss_dssp HTCSEEEEECSTTTC-TTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEE
T ss_pred cCCCEEEECcccccc-hhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEE
Confidence 35899988765 44 3467888899999998887775432 34566777888887
No 135
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=21.95 E-value=1e+02 Score=29.32 Aligned_cols=24 Identities=13% Similarity=-0.096 Sum_probs=20.6
Q ss_pred cCchHHHHHHHHHHcCCCcEEEEe
Q 023130 103 AGGKGANQAACGAKLSHPTYFVGQ 126 (287)
Q Consensus 103 ~GG~a~N~A~~la~LG~~~~lig~ 126 (287)
.|..|.-+|..|++.|.+|.++-+
T Consensus 272 gGiaGlsaA~~La~~G~~V~vlEk 295 (689)
T 3pvc_A 272 GGIVSALTALALQRRGAVVTLYCA 295 (689)
T ss_dssp CSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CcHHHHHHHHHHHHCCCcEEEEeC
Confidence 566778899999999999999975
No 136
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=21.93 E-value=64 Score=27.52 Aligned_cols=20 Identities=20% Similarity=0.174 Sum_probs=18.2
Q ss_pred HHHHHHHHHHcCCCcEEEEe
Q 023130 107 GANQAACGAKLSHPTYFVGQ 126 (287)
Q Consensus 107 a~N~A~~la~LG~~~~lig~ 126 (287)
+.|.|.+||++|.+|.+|..
T Consensus 65 avNLA~aLA~~GkkVllID~ 84 (314)
T 3fwy_A 65 SSNLSAAFSILGKRVLQIGC 84 (314)
T ss_dssp HHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEec
Confidence 58999999999999999885
No 137
>3m2o_A Glyoxalase/bleomycin resistance protein; unknown function, structural genomics, putative glyoxylase/B resistance protein; HET: PG4; 1.35A {Rhodopseudomonas palustris} PDB: 3vcx_A*
Probab=21.89 E-value=1.9e+02 Score=21.19 Aligned_cols=43 Identities=14% Similarity=0.030 Sum_probs=27.9
Q ss_pred HHHHHHHHHhCCCCCCceEEccCCCCCCc-eEEEEEcCCCCeeEEEeC
Q 023130 133 GKLITDALSGCGVRLDYMNVVKDGGVPTG-HAVVMLQSDGQNSIIIVG 179 (287)
Q Consensus 133 G~~i~~~L~~~gVd~~~v~~~~~~~~~T~-~~~v~i~~~Ger~~~~~~ 179 (287)
=+.+.+.|++.|+....-.... +.| +.+.+.|++|.+-.+...
T Consensus 101 vd~~~~~l~~~G~~~~~~~~~~----~~g~~~~~~~DPdG~~iel~~~ 144 (164)
T 3m2o_A 101 PDREYARLQQAGLPILLTLRDE----DFGQRHFITADPNGVLIDIIKP 144 (164)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEC-------CEEEEEECTTCCEEEEEC-
T ss_pred HHHHHHHHHHCCCceecCcccc----CCCcEEEEEECCCCCEEEEEEE
Confidence 4677889999999874322222 344 677789999988666543
No 138
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=21.73 E-value=1.1e+02 Score=25.13 Aligned_cols=48 Identities=15% Similarity=0.099 Sum_probs=35.3
Q ss_pred cCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCCCceEE
Q 023130 103 AGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNV 152 (287)
Q Consensus 103 ~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~~~v~~ 152 (287)
.||-|..+|..+++.|.++.+++. +....+.+.+.+++.|.+...+..
T Consensus 42 s~GIG~aia~~la~~G~~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~ 89 (275)
T 4imr_A 42 SRGIGAAIAEGLAGAGAHVILHGV--KPGSTAAVQQRIIASGGTAQELAG 89 (275)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEES--STTTTHHHHHHHHHTTCCEEEEEC
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcC--CHHHHHHHHHHHHhcCCeEEEEEe
Confidence 477889999999999999888776 223456677788877766554443
No 139
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=21.63 E-value=52 Score=27.23 Aligned_cols=60 Identities=12% Similarity=0.130 Sum_probs=42.7
Q ss_pred hhccccEEEEeCC-CCHHHHHHHHHHHHhCCCcEEEeCCCCCCCCchhhcc-CCcEEecCHHH
Q 023130 197 VVKKAGIVLLQRE-IPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN-FIDILSPNESE 257 (287)
Q Consensus 197 ~l~~a~~v~~~g~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~ll~-~~dil~~Ne~E 257 (287)
...+||++++... ++.+.+.++++.|++.|..+.+|.... .+....+-- .+|++-.|..+
T Consensus 120 ~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv~~~-eE~~~A~~l~g~~iIGinnr~ 181 (251)
T 1i4n_A 120 SSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVEVHSR-EDLEKVFSVIRPKIIGINTRD 181 (251)
T ss_dssp HHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEECSH-HHHHHHHTTCCCSEEEEECBC
T ss_pred HHcCCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEeCCH-HHHHHHHhcCCCCEEEEeCcc
Confidence 3467899888665 466779999999999999999999754 222222223 58888777644
No 140
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=21.48 E-value=1e+02 Score=25.31 Aligned_cols=46 Identities=17% Similarity=0.138 Sum_probs=33.8
Q ss_pred cCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCCCceE
Q 023130 103 AGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMN 151 (287)
Q Consensus 103 ~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~~~v~ 151 (287)
.||-|..+|..+++.|.++.+++ ++...+...+.+.+.|.....+.
T Consensus 40 s~GIG~aia~~la~~G~~V~~~~---r~~~~~~~~~~~~~~~~~~~~~~ 85 (273)
T 3uf0_A 40 GSGIGRAIAHGYARAGAHVLAWG---RTDGVKEVADEIADGGGSAEAVV 85 (273)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEE---SSTHHHHHHHHHHTTTCEEEEEE
T ss_pred CcHHHHHHHHHHHHCCCEEEEEc---CHHHHHHHHHHHHhcCCcEEEEE
Confidence 47888999999999999987776 33455667777877775554443
No 141
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=21.43 E-value=1.2e+02 Score=23.46 Aligned_cols=35 Identities=14% Similarity=-0.258 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHh
Q 023130 106 KGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSG 142 (287)
Q Consensus 106 ~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~ 142 (287)
.+.-.+..+..+|.++..++.++|| -+.|.+.|++
T Consensus 24 N~~~l~~~L~~~G~~v~~~~iv~Dd--~~~I~~~l~~ 58 (172)
T 3kbq_A 24 NAAFIGNFLTYHGYQVRRGFVVMDD--LDEIGWAFRV 58 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSC--HHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCC--HHHHHHHHHH
Confidence 4567788888999999999999998 3455555544
No 142
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=21.20 E-value=1.9e+02 Score=19.33 Aligned_cols=38 Identities=18% Similarity=0.236 Sum_probs=25.3
Q ss_pred HHHHHHHHhCCCCCCceEEccCCCCCCc-eEEEEEcCCCCeeE
Q 023130 134 KLITDALSGCGVRLDYMNVVKDGGVPTG-HAVVMLQSDGQNSI 175 (287)
Q Consensus 134 ~~i~~~L~~~gVd~~~v~~~~~~~~~T~-~~~v~i~~~Ger~~ 175 (287)
+.+.+.|++.|+......... ..| ..+.+.|++|..-.
T Consensus 85 ~~~~~~l~~~G~~~~~~~~~~----~~g~~~~~~~DPdG~~ie 123 (126)
T 2p25_A 85 EEVIAFLNEQGIETEPLRVDD----FTGKKMTFFFDPDGLPLE 123 (126)
T ss_dssp HHHHHHHHHTTCCCCCCEECT----TTCCEEEEEECTTCCEEE
T ss_pred HHHHHHHHHcCCccccccccC----CCCcEEEEEECCCCCEEE
Confidence 456789999999876443322 233 56667889987643
No 143
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=21.16 E-value=62 Score=28.87 Aligned_cols=23 Identities=17% Similarity=0.218 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEeCC
Q 023130 212 DSVNIQVAKAARSAGVPVIFDAG 234 (287)
Q Consensus 212 ~~~~~~~~~~a~~~g~~v~~D~~ 234 (287)
.+.++++++.|+++|++|++|.-
T Consensus 76 ~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 76 EDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEc
Confidence 45699999999999999999984
No 144
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=20.93 E-value=88 Score=24.91 Aligned_cols=48 Identities=13% Similarity=0.100 Sum_probs=34.6
Q ss_pred cCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCCCceEE
Q 023130 103 AGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNV 152 (287)
Q Consensus 103 ~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~~~v~~ 152 (287)
.||-|..+|..+++.|.++.+++. +....+.+.+.+++.|.+...+..
T Consensus 14 s~gIG~~~a~~l~~~G~~v~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~ 61 (247)
T 3lyl_A 14 SRGIGFEVAHALASKGATVVGTAT--SQASAEKFENSMKEKGFKARGLVL 61 (247)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEES--SHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CChHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHHHHhcCCceEEEEe
Confidence 477788999999999998877665 223456677788888766555443
No 145
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=20.65 E-value=3.4e+02 Score=22.00 Aligned_cols=55 Identities=15% Similarity=0.165 Sum_probs=36.2
Q ss_pred hhhccccEEEEeC--CCCHHHHHHHHHHHHhCCCcEEEeC-----CCCCCCCchhhccCCcEEe
Q 023130 196 EVVKKAGIVLLQR--EIPDSVNIQVAKAARSAGVPVIFDA-----GGMDAPIPQELLNFIDILS 252 (287)
Q Consensus 196 ~~l~~a~~v~~~g--~~~~~~~~~~~~~a~~~g~~v~~D~-----~~~~~~~~~~ll~~~dil~ 252 (287)
+.+...++|.++- .+. + +.++++.....|++|++-. .....+....+++.+|.+.
T Consensus 86 ~~~~~~dvViIDEaQF~~-~-v~el~~~l~~~gi~VI~~GL~~DF~~~~F~~~~~Ll~~AD~Vt 147 (234)
T 2orv_A 86 QEALGVAVIGIDEGQFFP-D-IVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVV 147 (234)
T ss_dssp HHHTTCSEEEESSGGGCT-T-HHHHHHHHHHTTCEEEEECCSBCTTSSBCTTGGGGGGGCSEEE
T ss_pred HHhccCCEEEEEchhhhh-h-HHHHHHHHHhCCCEEEEEecccccccCCcccHHHHHHhcccEE
Confidence 4446788888863 122 3 7788888888999988832 2222344677888888764
No 146
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=20.64 E-value=75 Score=23.80 Aligned_cols=42 Identities=10% Similarity=0.029 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHcCCCcEEEEeec--------------------CCchHHHHHHHHHhCCCCC
Q 023130 106 KGANQAACGAKLSHPTYFVGQVG--------------------EDANGKLITDALSGCGVRL 147 (287)
Q Consensus 106 ~a~N~A~~la~LG~~~~lig~vG--------------------~D~~G~~i~~~L~~~gVd~ 147 (287)
.|.-+|..|+++|.+++++-.-. +....+.+.+.+++.||+.
T Consensus 12 ~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v 73 (180)
T 2ywl_A 12 SGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEV 73 (180)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEE
Confidence 46788889999999999997421 0134567777788888764
No 147
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=20.62 E-value=87 Score=25.42 Aligned_cols=50 Identities=18% Similarity=0.162 Sum_probs=33.7
Q ss_pred CCCCEEEECCceeeeEeecCCCCCCCcEEEecCceeecCchHHHHHHHHHHcCCCcEEEEe
Q 023130 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126 (287)
Q Consensus 66 ~~~~IlviG~~~iD~~~~vd~~P~~~~~~~~~~~~~~~GG~a~N~A~~la~LG~~~~lig~ 126 (287)
..+++++.|.....-+ | |.+. . ...+.||-|.-.|..+++.|.+|.+++.
T Consensus 7 ~gk~vlVTgG~T~E~i---D--pVR~----i--tN~SSg~iG~aiA~~~~~~Ga~V~l~~~ 56 (226)
T 1u7z_A 7 KHLNIMITAGPTREPL---D--PVRY----I--SDHSSGKMGFAIAAAAARRGANVTLVSG 56 (226)
T ss_dssp TTCEEEEEESBCEEES---S--SSEE----E--EECCCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCCCCccc---C--ceee----c--cCCCccHHHHHHHHHHHHCCCEEEEEEC
Confidence 3456777777654332 1 1110 0 2346799999999999999999999853
No 148
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=20.59 E-value=2.5e+02 Score=20.43 Aligned_cols=30 Identities=20% Similarity=0.333 Sum_probs=22.7
Q ss_pred cccEEEEeCCCCHHHHHHHHHHHHhCCCcEEE
Q 023130 200 KAGIVLLQREIPDSVNIQVAKAARSAGVPVIF 231 (287)
Q Consensus 200 ~a~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~ 231 (287)
..|++++. .|.+....+++.+.+.|++.++
T Consensus 77 ~vDlvvi~--vp~~~~~~vv~~~~~~gi~~i~ 106 (144)
T 2d59_A 77 KIEVVDLF--VKPKLTMEYVEQAIKKGAKVVW 106 (144)
T ss_dssp CCSEEEEC--SCHHHHHHHHHHHHHHTCSEEE
T ss_pred CCCEEEEE--eCHHHHHHHHHHHHHcCCCEEE
Confidence 57888884 5667788888888888887554
No 149
>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}
Probab=20.49 E-value=1.3e+02 Score=21.55 Aligned_cols=41 Identities=10% Similarity=0.000 Sum_probs=27.7
Q ss_pred HHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEE
Q 023130 133 GKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIII 177 (287)
Q Consensus 133 G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~ 177 (287)
=+.+.+.|++.|+....-.... +.+..+.+.|++|..-.+.
T Consensus 100 v~~~~~~l~~~G~~~~~~~~~~----~~g~~~~~~DPdG~~iel~ 140 (144)
T 2kjz_A 100 VDETFAGWKASGVAMLQQPAKM----EFGYTFTAADPDSHRLRVY 140 (144)
T ss_dssp HHHHHHHHHHTTCCCCSCCEEE----TTEEEEEECCTTCCEEEEE
T ss_pred HHHHHHHHHHCCCeEecCceec----CCceEEEEECCCCCEEEEE
Confidence 4677889999998864322222 3467777889999875544
No 150
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=20.35 E-value=4e+02 Score=22.65 Aligned_cols=89 Identities=19% Similarity=0.257 Sum_probs=49.3
Q ss_pred EEeec-CCchHHHHHHHHHhCC---CCCCceEEccCCCCCCceEEEEEcCCCCeeEEEeCCCCCCCCCcccCchhHhhhc
Q 023130 124 VGQVG-EDANGKLITDALSGCG---VRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVK 199 (287)
Q Consensus 124 ig~vG-~D~~G~~i~~~L~~~g---Vd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~~ga~~~~~~~~l~~~~~~~l~ 199 (287)
++.+| ....|+.+.+.|.+.+ ++...+ .. ....|..+. + .|.. +.+ .++.+ +.+.
T Consensus 6 V~I~GAtG~iG~~llr~L~~~~~p~~elv~i--~s--~~~~G~~~~-~--~~~~-i~~----------~~~~~---~~~~ 64 (336)
T 2r00_A 6 VAIFGATGAVGETMLEVLQEREFPVDELFLL--AS--ERSEGKTYR-F--NGKT-VRV----------QNVEE---FDWS 64 (336)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCCEEEEEEE--EC--TTTTTCEEE-E--TTEE-EEE----------EEGGG---CCGG
T ss_pred EEEECCCCHHHHHHHHHHhcCCCCCEEEEEE--EC--CCCCCCcee-e--cCce-eEE----------ecCCh---HHhc
Confidence 55666 6679999999998874 333222 21 112333322 1 1211 111 11111 1245
Q ss_pred cccEEEEeCCCCHHHHHHHHHHHHhCCCcEEEeCCCC
Q 023130 200 KAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM 236 (287)
Q Consensus 200 ~a~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~D~~~~ 236 (287)
.+|+++++ .+.....+.+..+.+.|+ +++|.+..
T Consensus 65 ~vDvVf~a--~g~~~s~~~a~~~~~~G~-~vId~s~~ 98 (336)
T 2r00_A 65 QVHIALFS--AGGELSAKWAPIAAEAGV-VVIDNTSH 98 (336)
T ss_dssp GCSEEEEC--SCHHHHHHHHHHHHHTTC-EEEECSST
T ss_pred CCCEEEEC--CCchHHHHHHHHHHHcCC-EEEEcCCc
Confidence 78999885 455566777777778888 56777654
No 151
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=20.30 E-value=1.1e+02 Score=24.85 Aligned_cols=48 Identities=10% Similarity=0.036 Sum_probs=34.6
Q ss_pred cCchHHHHHHHHHHcCCCcEEEEeecCCchHHHHHHHHHhCCCCCCceEE
Q 023130 103 AGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNV 152 (287)
Q Consensus 103 ~GG~a~N~A~~la~LG~~~~lig~vG~D~~G~~i~~~L~~~gVd~~~v~~ 152 (287)
.||-|..+|..+++-|.++.+++. +....+.+.+.+++.|.+...+..
T Consensus 20 s~gIG~aia~~l~~~G~~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~ 67 (264)
T 3ucx_A 20 GPALGTTLARRCAEQGADLVLAAR--TVERLEDVAKQVTDTGRRALSVGT 67 (264)
T ss_dssp CTTHHHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcHHHHHHHHHHHHCcCEEEEEeC--CHHHHHHHHHHHHhcCCcEEEEEc
Confidence 578899999999999999877765 223456677778777766554443
No 152
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=20.10 E-value=2.1e+02 Score=19.45 Aligned_cols=46 Identities=13% Similarity=0.024 Sum_probs=28.0
Q ss_pred HHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEEEe
Q 023130 133 GKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIV 178 (287)
Q Consensus 133 G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~~~ 178 (287)
=+.+.+.|++.|+....-.....+.....+.+.+.|++|.+-.+..
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~ 129 (133)
T 3ey7_A 84 LSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVST 129 (133)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEe
Confidence 4567789999999876432211001112267778899998765543
No 153
>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2
Probab=20.08 E-value=1.8e+02 Score=19.28 Aligned_cols=38 Identities=11% Similarity=-0.011 Sum_probs=26.3
Q ss_pred HHHHHHHHHhCCCCCCceEEccCCCCCCceEEEEEcCCCCeeEE
Q 023130 133 GKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSII 176 (287)
Q Consensus 133 G~~i~~~L~~~gVd~~~v~~~~~~~~~T~~~~v~i~~~Ger~~~ 176 (287)
=+.+.+.|++.|+..... ... . +..+.+.|++|..-.+
T Consensus 74 ~~~~~~~l~~~G~~~~~p-~~~----~-~~~~~~~DPdG~~iel 111 (113)
T 1xqa_A 74 VDKINQRLKEDGFLVEPP-KHA----H-AYTFYVEAPGGFTIEV 111 (113)
T ss_dssp HHHHHHHHHHTTCCCCCC-EEC------CEEEEEEETTTEEEEE
T ss_pred HHHHHHHHHHCCCEEecC-cCC----C-cEEEEEECCCCcEEEE
Confidence 456778899999987543 222 3 7788889999976443
Done!