BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023132
MYLKKPLWSEGVEKQMESETETAAATAVGELANSLKQQRVQREITLALRTGLRDARAEFS
FLRVRGLRSLLKILRSVAESDSTIHFFCQSQSVPELQDSVDERVTSLDHIFTVDPMRVTS
PSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLM
LDSSANQLDFEACNGIEEVAELIRDKQVDENLRLRCGEFLLLLIGHVNGRQLSPMATIHE
DIRRLLGEKSASLIWAASQFGSTLNPEERLMALHIQARRVLESLDLY

High Scoring Gene Products

Symbol, full name Information P value
ISI1
IMPAIRED SUCROSE INDUCTION 1 		protein from Arabidopsis thaliana 1.2e-90

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023132
        (287 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2137757 - symbol:ISI1 "IMPAIRED SUCROSE INDUCT...   904  1.2e-90   1


>TAIR|locus:2137757 [details] [associations]
            symbol:ISI1 "IMPAIRED SUCROSE INDUCTION 1" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0009745 "sucrose mediated signaling" evidence=IMP] [GO:0006109
            "regulation of carbohydrate metabolic process" evidence=IMP]
            GO:GO:0006109 EMBL:CP002687 Gene3D:1.25.10.10 InterPro:IPR011989
            InterPro:IPR012535 Pfam:PF08045 EMBL:BT003934 EMBL:BT005053
            EMBL:AJ697740 IPI:IPI00536509 RefSeq:NP_194505.2 UniGene:At.27940
            STRING:Q84J43 PaxDb:Q84J43 PRIDE:Q84J43 DNASU:828889
            EnsemblPlants:AT4G27750.1 GeneID:828889 KEGG:ath:AT4G27750
            TAIR:At4g27750 eggNOG:NOG282865 HOGENOM:HOG000070850
            InParanoid:Q84J43 OMA:EPMKITS PhylomeDB:Q84J43
            ProtClustDB:CLSN2680119 Genevestigator:Q84J43 Uniprot:Q84J43
        Length = 305

 Score = 904 (323.3 bits), Expect = 1.2e-90, P = 1.2e-90
 Identities = 181/271 (66%), Positives = 220/271 (81%)

Query:    28 VGELANSLKQQRVQREITLALRTGLRDARAEFSFLRVRGLRSLLKILRSVAESDSTIHFF 87
             V EL  SL  QR+ RE+TL+LRTGLRDA AEFSFLR+RGLRSLLK LR+VA+SDS I  F
Sbjct:    35 VEELVTSLNTQRLYRELTLSLRTGLRDACAEFSFLRIRGLRSLLKTLRTVADSDSIIRLF 94

Query:    88 CQSQSVPELQ-----------DSVDERVTSLDHIFTVDPMRVTSPSTDAEVALALRVLEG 136
               +Q++ +LQ           ++ D++VTSLDHIF+V+PM++TSPSTDAEVA+ALRVLEG
Sbjct:    95 SHTQTISDLQLVPVLFQHSLKEAEDDKVTSLDHIFSVEPMKITSPSTDAEVAVALRVLEG 154

Query:   137 CCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGI 196
             CCLLH +S +LAHKH A++++MN+LSTRG LEQGACLDAL S++LDSSANQ+DF ACNGI
Sbjct:   155 CCLLHPQSTVLAHKHGAVRVMMNVLSTRGVLEQGACLDALISVLLDSSANQVDFGACNGI 214

Query:   197 EEVAELIRDKQVDENXXXXXXXXXXXXIGHVNGRQLSPMATIHEDIRRLLGEKSASLIWA 256
             EEVA L+RDKQ DEN            +GHVNG+  SP+A+++EDIRRLLGEKSASLIWA
Sbjct:   215 EEVAMLMRDKQADENLRLRCGEFLLLLVGHVNGKDRSPIASVNEDIRRLLGEKSASLIWA 274

Query:   257 ASQFGSTLNPEERLMALHIQARRVLESLDLY 287
             ASQFGST +PE+R+ ALHIQA RVLESLDLY
Sbjct:   275 ASQFGSTGDPEQRITALHIQAGRVLESLDLY 305

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 54/104 (51%), Positives = 68/104 (65%)

Query:     1 MYLKKPLWSEGVE-------KQMXXXXXXXXXXXVGELANSLKQQRVQREITLALRTGLR 53
             MYLK+P+WS+G         +             V EL  SL  QR+ RE+TL+LRTGLR
Sbjct:     1 MYLKRPIWSDGASATPENPSESETGEESDAASMVVEELVTSLNTQRLYRELTLSLRTGLR 60

Query:    54 DARAEFSFLRVRGLRSLLKILRSVAESDSTIHFFCQSQSVPELQ 97
             DA AEFSFLR+RGLRSLLK LR+VA+SDS I  F  +Q++ +LQ
Sbjct:    61 DACAEFSFLRIRGLRSLLKTLRTVADSDSIIRLFSHTQTISDLQ 104


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.371    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      287       264   0.00092  114 3  11 22  0.44    33
                                                     32  0.50    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  601 (64 KB)
  Total size of DFA:  170 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.91u 0.15s 21.06t   Elapsed:  00:00:01
  Total cpu time:  20.91u 0.15s 21.06t   Elapsed:  00:00:01
  Start:  Sat May 11 12:04:21 2013   End:  Sat May 11 12:04:22 2013

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