BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 023132
         (287 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P36589|CDC14_SCHPO Cell division control protein 14 OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=cdc14 PE=1 SV=1
          Length = 240

 Score = 43.5 bits (101), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 1/96 (1%)

Query: 131 LRVLEGCCLLHRESAILAHKHKAIKILMNIL-STRGALEQGACLDALTSLMLDSSANQLD 189
           L V+EG  L+H +S  L      +++ +++L  ++ ++ Q A +  L  +M D       
Sbjct: 95  LHVIEGLVLIHPKSQTLFEDKATLRLFIHLLQPSQPSMLQVAAMKTLVCIMADRPLAIRL 154

Query: 190 FEACNGIEEVAELIRDKQVDENLRLRCGEFLLLLIG 225
           FE  NG++++  + + KQ  ++ R +  EF    + 
Sbjct: 155 FEQINGLQQICVVFKHKQTSQDTRFQILEFFYFYLS 190


>sp|Q9Y5W9|SNX11_HUMAN Sorting nexin-11 OS=Homo sapiens GN=SNX11 PE=2 SV=2
          Length = 270

 Score = 33.1 bits (74), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 3/51 (5%)

Query: 58  EFSFLRVRGLRSLL-KILRSVAE-SDSTIHFFCQSQ-SVPELQDSVDERVT 105
           EF   R +GL+  L K+L+SV   SDS +H F QSQ SVPE++  V  R T
Sbjct: 94  EFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQSQLSVPEIEACVQGRST 144


>sp|O87390|GLXB_RHIME Glutamine amidotransferase-like protein GlxB OS=Rhizobium meliloti
           (strain 1021) GN=glxB PE=3 SV=3
          Length = 301

 Score = 32.3 bits (72), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 17/110 (15%)

Query: 3   LKKPLWSEGVEKQMESETETAAATAVGELANSLKQQRVQREITLALRTGLRDARAEFSFL 62
           L++ L  EG+  + +++TE AAA    E+A         +++  AL   L D    F+F 
Sbjct: 184 LRRELIREGIAFETQNDTEVAAAYLTAEMAKG-------KDLGQALTGALDDLDGFFTF- 235

Query: 63  RVRGLRSLLKILRS--------VAESDSTIHFFCQSQSVPELQDSVDERV 104
            V G +S   ++R         +AE+D  + F  + +++  L D    R+
Sbjct: 236 -VVGTKSGFGVVRDPIACKPAVMAETDRYVAFGSEYRALVNLPDIESARI 284


>sp|Q91WL6|SNX11_MOUSE Sorting nexin-11 OS=Mus musculus GN=Snx11 PE=2 SV=1
          Length = 271

 Score = 32.3 bits (72), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 14/136 (10%)

Query: 58  EFSFLRVRGLRSLL-KILRSVAE-SDSTIHFFCQSQ-SVPELQDSVDER--VTSLDHIFT 112
           EF   R +GL+  L K+L+SV   SDS +H F QSQ SVPE++  V  R  +T  D I +
Sbjct: 94  EFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQSQLSVPEIEACVQGRGAMTVSDAILS 153

Query: 113 VDPMRVTSPSTDAEVALALRV---LEGCCLLHR------ESAILAHKHKAIKILMNILST 163
                      + +    L     L  CC L R       S  L+ + + ++    ++ +
Sbjct: 154 YAMSNCGWAQEERQSTSHLAKGDQLNSCCFLPRSGRRSSPSPPLSEEKEQLETWAPVMDS 213

Query: 164 RGALEQGACLDALTSL 179
            G   +   L   +SL
Sbjct: 214 EGPSSESPTLLPSSSL 229


>sp|Q5EFZ4|VAC8_PICPA Vacuolar protein 8 OS=Komagataella pastoris GN=VAC8 PE=3 SV=3
          Length = 556

 Score = 32.3 bits (72), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)

Query: 10  EGVEKQMESETETAAATAVGELANSLKQQRVQREITLALRTGLRDARAEFSFLRVRGLRS 69
           EG  K++ S TE    + + +L +S    RVQ + TLALR    DA  +   +R  GL +
Sbjct: 240 EGNRKKLAS-TEPKLISQLVQLMDS-TSPRVQCQATLALRNLASDANYQLEIVRAGGLPN 297

Query: 70  LLKILRS 76
           L+ +L S
Sbjct: 298 LVTLLNS 304


>sp|Q08DD7|SNX11_BOVIN Sorting nexin-11 OS=Bos taurus GN=SNX11 PE=2 SV=1
          Length = 270

 Score = 31.6 bits (70), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 3/49 (6%)

Query: 58  EFSFLRVRGLRSLL-KILRSVAE-SDSTIHFFCQSQ-SVPELQDSVDER 103
           EF   R +GL+  L K+L+SV   SDS +H F QSQ SVPE++  V  R
Sbjct: 94  EFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQSQLSVPEIEACVQGR 142


>sp|O55174|ZNT4_RAT Zinc transporter 4 OS=Rattus norvegicus GN=Slc30a4 PE=2 SV=1
          Length = 430

 Score = 31.2 bits (69), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 22/92 (23%), Positives = 44/92 (47%)

Query: 179 LMLDSSANQLDFEACNGIEEVAELIRDKQVDENLRLRCGEFLLLLIGHVNGRQLSPMATI 238
           L L +S   L  + C+   +  EL++ ++V   L +    +LL +IG + G  ++    I
Sbjct: 81  LPLTNSQLSLKMDPCDNCSKRRELLKQRKVKTRLTIAAVLYLLFMIGELVGGYMANSLAI 140

Query: 239 HEDIRRLLGEKSASLIWAASQFGSTLNPEERL 270
             D   +L + SA ++   + + S+ +P  R 
Sbjct: 141 MTDALHMLTDLSAIILTLLALWLSSKSPTRRF 172


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.133    0.369 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,012,284
Number of Sequences: 539616
Number of extensions: 3141639
Number of successful extensions: 9737
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 9732
Number of HSP's gapped (non-prelim): 14
length of query: 287
length of database: 191,569,459
effective HSP length: 116
effective length of query: 171
effective length of database: 128,974,003
effective search space: 22054554513
effective search space used: 22054554513
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)