Query 023132
Match_columns 287
No_of_seqs 29 out of 31
Neff 2.7
Searched_HMMs 29240
Date Mon Mar 25 16:53:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023132.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023132hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hxt_A De novo protein OR329; 97.1 0.0087 3E-07 47.1 12.1 108 124-233 142-249 (252)
2 4db6_A Armadillo repeat protei 96.4 0.0075 2.6E-07 47.2 6.9 99 123-223 109-207 (210)
3 4db8_A Armadillo-repeat protei 96.4 0.0067 2.3E-07 48.6 6.3 101 122-224 108-208 (252)
4 4hxt_A De novo protein OR329; 96.3 0.019 6.4E-07 45.2 8.6 99 124-224 16-114 (252)
5 4db6_A Armadillo repeat protei 96.3 0.014 4.9E-07 45.6 7.5 100 124-225 68-167 (210)
6 4db8_A Armadillo-repeat protei 96.0 0.18 6.2E-06 40.3 12.8 100 124-225 68-167 (252)
7 1xm9_A Plakophilin 1; armadill 95.9 0.052 1.8E-06 49.6 10.5 102 124-226 16-117 (457)
8 1xqr_A HSPBP1 protein; armadil 95.9 0.089 3E-06 46.7 11.6 100 124-225 96-196 (296)
9 1jdh_A Beta-catenin; beta-cate 95.6 0.29 1E-05 43.1 13.7 100 124-226 157-257 (529)
10 1xm9_A Plakophilin 1; armadill 94.9 0.041 1.4E-06 50.2 6.3 109 116-227 337-451 (457)
11 1wa5_B Importin alpha subunit; 94.9 0.16 5.3E-06 46.1 9.9 102 124-227 145-246 (530)
12 2jdq_A Importin alpha-1 subuni 94.8 0.69 2.4E-05 39.7 13.3 102 125-227 80-181 (450)
13 4b8j_A Importin subunit alpha- 94.1 1.3 4.3E-05 39.9 14.0 109 116-226 292-401 (528)
14 4b8j_A Importin subunit alpha- 94.0 0.23 7.9E-06 44.7 8.9 102 124-226 132-233 (528)
15 2z6h_A Catenin beta-1, beta-ca 93.8 0.2 6.9E-06 47.0 8.5 103 118-224 423-526 (644)
16 1jdh_A Beta-catenin; beta-cate 93.4 0.15 5.3E-06 44.8 6.6 96 124-220 115-210 (529)
17 1xqr_A HSPBP1 protein; armadil 93.3 0.36 1.2E-05 42.9 8.9 102 123-226 138-239 (296)
18 2z6g_A B-catenin; FULL-length, 92.4 0.38 1.3E-05 47.3 8.4 105 118-226 559-664 (780)
19 3tt9_A Plakophilin-2; cell adh 92.1 0.49 1.7E-05 41.2 7.9 103 118-221 17-120 (233)
20 2z6h_A Catenin beta-1, beta-ca 91.7 0.47 1.6E-05 44.5 7.8 99 123-222 111-209 (644)
21 2jdq_A Importin alpha-1 subuni 91.6 0.91 3.1E-05 38.9 8.9 103 122-226 288-391 (450)
22 1wa5_B Importin alpha subunit; 91.0 5.2 0.00018 36.1 13.7 102 123-226 312-413 (530)
23 2z6g_A B-catenin; FULL-length, 89.2 0.92 3.2E-05 44.5 7.7 91 116-206 240-330 (780)
24 3ul1_B Importin subunit alpha- 87.8 2.9 9.9E-05 38.4 9.6 107 116-224 322-429 (510)
25 3nmz_A APC variant protein; pr 86.8 7.6 0.00026 36.7 12.1 179 23-224 67-271 (458)
26 3grl_A General vesicular trans 85.8 5.5 0.00019 40.4 11.2 142 130-278 186-339 (651)
27 3tpo_A Importin subunit alpha- 85.8 3 0.0001 38.3 8.6 107 116-224 341-448 (529)
28 3nmw_A APC variant protein; AR 85.1 1.5 5.1E-05 39.7 6.2 101 122-225 44-156 (354)
29 3tpo_A Importin subunit alpha- 84.9 2 7E-05 39.4 7.0 81 128-208 138-218 (529)
30 3l6x_A Catenin delta-1; cateni 83.5 2.7 9.3E-05 41.4 7.6 89 124-213 62-151 (584)
31 3ul1_B Importin subunit alpha- 83.3 3.4 0.00012 38.0 7.8 79 129-207 120-198 (510)
32 3nmw_A APC variant protein; AR 82.2 3.1 0.00011 37.7 7.0 97 128-226 236-335 (354)
33 3grl_A General vesicular trans 81.0 8.9 0.00031 38.9 10.4 192 23-226 18-242 (651)
34 3nmz_A APC variant protein; pr 74.2 7.7 0.00026 36.7 7.3 97 128-226 352-451 (458)
35 3l6x_A Catenin delta-1; cateni 71.6 11 0.00037 37.2 7.9 106 116-223 361-474 (584)
36 1juq_A ADP-ribosylation factor 54.4 30 0.001 28.8 6.5 81 118-209 59-149 (171)
37 1elk_A Target of MYB1; superhe 50.5 41 0.0014 27.4 6.6 83 117-209 61-154 (157)
38 3now_A UNC-45 protein, SD10334 49.9 57 0.002 33.5 8.8 187 25-221 494-690 (810)
39 3ldz_A STAM-1, signal transduc 47.0 73 0.0025 25.4 7.5 80 123-209 55-138 (140)
40 3g2s_A C-terminal fragment of 46.5 47 0.0016 27.2 6.3 93 149-243 45-142 (149)
41 3now_A UNC-45 protein, SD10334 44.5 25 0.00086 36.1 5.3 95 130-224 685-781 (810)
42 1x5b_A Signal transducing adap 35.6 1.1E+02 0.0039 25.0 7.1 77 123-209 65-149 (163)
43 3rru_A TOM1L1 protein; structu 34.8 21 0.00071 29.5 2.4 27 201-227 105-132 (152)
44 3tt9_A Plakophilin-2; cell adh 28.2 45 0.0015 28.8 3.5 93 129-223 71-178 (233)
45 1mhq_A ADP-ribosylation factor 28.1 1.1E+02 0.0038 24.7 5.7 94 148-243 34-132 (148)
46 1mhq_A ADP-ribosylation factor 27.3 1.3E+02 0.0044 24.4 5.9 76 123-208 51-136 (148)
47 3g2s_A C-terminal fragment of 26.4 1.4E+02 0.0047 24.4 6.0 78 122-209 60-147 (149)
48 2vgl_B AP-2 complex subunit be 25.4 3.1E+02 0.011 25.6 8.9 77 164-264 383-459 (591)
49 3ldz_A STAM-1, signal transduc 23.4 2.4E+02 0.0084 22.3 6.8 94 149-244 39-134 (140)
50 3zyq_A Hepatocyte growth facto 22.4 1.3E+02 0.0043 25.8 5.3 95 149-244 42-138 (226)
51 3eg5_B Protein diaphanous homo 22.0 4.6E+02 0.016 24.0 9.4 187 26-217 70-286 (383)
52 1yx4_A 26S proteasome non-ATPa 21.0 35 0.0012 28.7 1.4 15 120-134 35-49 (132)
53 3ltm_A Alpha-REP4; protein eng 20.6 2.9E+02 0.01 21.2 8.0 56 152-220 19-74 (211)
54 2qk2_A LP04448P; mini spindles 20.5 3.3E+02 0.011 21.7 7.2 108 128-247 75-186 (242)
55 1nzn_A CGI-135 protein, fissio 20.5 38 0.0013 27.4 1.5 46 120-173 32-77 (126)
56 1x5b_A Signal transducing adap 20.5 2.5E+02 0.0086 22.9 6.5 76 149-225 49-125 (163)
57 1juq_A ADP-ribosylation factor 20.1 2.1E+02 0.0072 23.7 6.0 93 149-243 47-144 (171)
58 1w63_A Adapter-related protein 20.1 3.3E+02 0.011 25.7 8.0 35 39-76 138-172 (618)
No 1
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=97.13 E-value=0.0087 Score=47.13 Aligned_cols=108 Identities=13% Similarity=0.100 Sum_probs=89.9
Q ss_pred hHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHH
Q 023132 124 DAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELI 203 (287)
Q Consensus 124 dsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~ll 203 (287)
+.-...|++.|--.|--.+..+....+..+++.++++|....+..+..++-+|-.+...++.+...+.+.+++..+.+++
T Consensus 142 ~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~i~~L~~ll 221 (252)
T 4hxt_A 142 SEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKLL 221 (252)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHHHHHTTHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHH
Confidence 44456688888888877777777777889999999999988888999999999999988999999999999999999999
Q ss_pred hhcccccchhhhHHHHHHHHhhhccCCCCC
Q 023132 204 RDKQVDENLRLRCGEFLLLLIGHVNGRQLS 233 (287)
Q Consensus 204 K~~qvd~~vRlKC~EFLl~yl~~~~~~~~~ 233 (287)
++. +.++|..+...|.-+..+..+...+
T Consensus 222 ~~~--~~~v~~~a~~~L~~l~~~~~~~~~~ 249 (252)
T 4hxt_A 222 TST--DSEVQKEAQRALENIKSGGWLEHHH 249 (252)
T ss_dssp GCS--CHHHHHHHHHHHHHHHHTCBCCC--
T ss_pred CCC--cHHHHHHHHHHHHHHHcCCCccccc
Confidence 864 6789999999888887766655433
No 2
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=96.45 E-value=0.0075 Score=47.17 Aligned_cols=99 Identities=17% Similarity=0.161 Sum_probs=84.0
Q ss_pred ChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHH
Q 023132 123 TDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAEL 202 (287)
Q Consensus 123 TdsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~l 202 (287)
...-...|+.+|.-.|--.+..+.......+++.++++|....+-.|..++-+|-.+.-+++.+...+.+..+++.+.++
T Consensus 109 ~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~L~~l 188 (210)
T 4db6_A 109 NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQL 188 (210)
T ss_dssp CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHG
T ss_pred cHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHH
Confidence 34445568888888887777777777788899999999998888889999999999999999999999999999999999
Q ss_pred HhhcccccchhhhHHHHHHHH
Q 023132 203 IRDKQVDENLRLRCGEFLLLL 223 (287)
Q Consensus 203 lK~~qvd~~vRlKC~EFLl~y 223 (287)
+++ -++++|-++.+.|--+
T Consensus 189 l~~--~~~~v~~~a~~aL~~l 207 (210)
T 4db6_A 189 QSH--ENEKIQKEAQEALEKL 207 (210)
T ss_dssp GGC--SCHHHHHHHHHHHHHH
T ss_pred HhC--CCHHHHHHHHHHHHHH
Confidence 985 4778999999887654
No 3
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=96.36 E-value=0.0067 Score=48.64 Aligned_cols=101 Identities=14% Similarity=0.082 Sum_probs=83.1
Q ss_pred CChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHH
Q 023132 122 STDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAE 201 (287)
Q Consensus 122 ~TdsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~ 201 (287)
+.+.-...|+..|--.|--.........+..+++.++++|....+-.+..++.+|-.+..+++.+...+-+.+++..+.+
T Consensus 108 ~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ 187 (252)
T 4db8_A 108 PNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQ 187 (252)
T ss_dssp SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHH
Confidence 34445566788887777665555467778889999999998887888999999998888888899889999999999999
Q ss_pred HHhhcccccchhhhHHHHHHHHh
Q 023132 202 LIRDKQVDENLRLRCGEFLLLLI 224 (287)
Q Consensus 202 llK~~qvd~~vRlKC~EFLl~yl 224 (287)
++++. ++++|..++..|.-+.
T Consensus 188 ll~~~--~~~v~~~a~~~L~~l~ 208 (252)
T 4db8_A 188 LLSSP--NEQILQEALWALSNIA 208 (252)
T ss_dssp GGGCS--SHHHHHHHHHHHHHHT
T ss_pred HHCCC--CHHHHHHHHHHHHHHh
Confidence 99976 8899999988887665
No 4
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=96.34 E-value=0.019 Score=45.23 Aligned_cols=99 Identities=13% Similarity=0.140 Sum_probs=86.7
Q ss_pred hHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHH
Q 023132 124 DAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELI 203 (287)
Q Consensus 124 dsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~ll 203 (287)
......|++.|.-.+--++..+....+..+++.++++|....+-.+..++.+|-.+-.+++.+...+-+.+|+..+.+++
T Consensus 16 ~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll 95 (252)
T 4hxt_A 16 SETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLL 95 (252)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHH
Confidence 55566788888888888887888888889999999999998888899999999999999999999999999999999999
Q ss_pred hhcccccchhhhHHHHHHHHh
Q 023132 204 RDKQVDENLRLRCGEFLLLLI 224 (287)
Q Consensus 204 K~~qvd~~vRlKC~EFLl~yl 224 (287)
++ -++++|..|+.-|.-+.
T Consensus 96 ~~--~~~~v~~~a~~~L~~l~ 114 (252)
T 4hxt_A 96 TS--TDSEVQKEAARALANIA 114 (252)
T ss_dssp TC--SSHHHHHHHHHHHHHHT
T ss_pred cC--CCHHHHHHHHHHHHHHH
Confidence 96 46889988888777766
No 5
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=96.26 E-value=0.014 Score=45.59 Aligned_cols=100 Identities=14% Similarity=0.081 Sum_probs=86.5
Q ss_pred hHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHH
Q 023132 124 DAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELI 203 (287)
Q Consensus 124 dsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~ll 203 (287)
+.-...|++.|--.|--.+..+....+..++..++++|....+-.+..++-+|-.+..+++.+...+-+..++..+.+++
T Consensus 68 ~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll 147 (210)
T 4db6_A 68 EQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLL 147 (210)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHH
Confidence 34456688888888887888888888899999999999988888899999999988888888888899999999999999
Q ss_pred hhcccccchhhhHHHHHHHHhh
Q 023132 204 RDKQVDENLRLRCGEFLLLLIG 225 (287)
Q Consensus 204 K~~qvd~~vRlKC~EFLl~yl~ 225 (287)
++. +.++|..++..|.-+..
T Consensus 148 ~~~--~~~v~~~a~~aL~~l~~ 167 (210)
T 4db6_A 148 SSP--NEQILQEALWALSNIAS 167 (210)
T ss_dssp TCS--CHHHHHHHHHHHHHHHT
T ss_pred cCC--CHHHHHHHHHHHHHHHc
Confidence 975 78899999988877654
No 6
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=95.99 E-value=0.18 Score=40.27 Aligned_cols=100 Identities=14% Similarity=0.081 Sum_probs=81.8
Q ss_pred hHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHH
Q 023132 124 DAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELI 203 (287)
Q Consensus 124 dsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~ll 203 (287)
+.-...|++.|.-++--++..+....+..++..++++|....+..+..++.+|-.+-.+++.....+-+.+|+..+.+++
T Consensus 68 ~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL 147 (252)
T 4db8_A 68 EQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLL 147 (252)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHH
Confidence 44455688888888887888888888889999999999998788889999888777666555548888999999999999
Q ss_pred hhcccccchhhhHHHHHHHHhh
Q 023132 204 RDKQVDENLRLRCGEFLLLLIG 225 (287)
Q Consensus 204 K~~qvd~~vRlKC~EFLl~yl~ 225 (287)
++. +.++|..++..|.-+..
T Consensus 148 ~~~--~~~v~~~a~~~L~~l~~ 167 (252)
T 4db8_A 148 SSP--NEQILQEALWALSNIAS 167 (252)
T ss_dssp GCS--CHHHHHHHHHHHHHHTT
T ss_pred hCC--CHHHHHHHHHHHHHHHc
Confidence 875 77899888877766654
No 7
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=95.89 E-value=0.052 Score=49.55 Aligned_cols=102 Identities=21% Similarity=0.280 Sum_probs=86.6
Q ss_pred hHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHH
Q 023132 124 DAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELI 203 (287)
Q Consensus 124 dsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~ll 203 (287)
+..-..|...|.-.|.-.++.+....+..++..|+++|....+-.|....-+|--+-.++++|...+-+..|+...+++|
T Consensus 16 ~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G~i~~Lv~lL 95 (457)
T 1xm9_A 16 EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLL 95 (457)
T ss_dssp THHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHH
Confidence 34455688888888877778887888999999999999987778899999999999999999999999999999999999
Q ss_pred hhcccccchhhhHHHHHHHHhhh
Q 023132 204 RDKQVDENLRLRCGEFLLLLIGH 226 (287)
Q Consensus 204 K~~qvd~~vRlKC~EFLl~yl~~ 226 (287)
++.+ +.+++-.++.-|.-+..+
T Consensus 96 ~~~~-~~~~~~~a~~aL~nLa~~ 117 (457)
T 1xm9_A 96 RRTG-NAEIQKQLTGLLWNLSST 117 (457)
T ss_dssp TTCC-CHHHHHHHHHHHHHHHTS
T ss_pred hhCC-CHHHHHHHHHHHHHHhcC
Confidence 8544 668888888777777665
No 8
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=95.87 E-value=0.089 Score=46.73 Aligned_cols=100 Identities=15% Similarity=0.162 Sum_probs=82.4
Q ss_pred hHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhc-CcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHH
Q 023132 124 DAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTR-GALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAEL 202 (287)
Q Consensus 124 dsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~r-g~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~l 202 (287)
..=-..|.++|--++=..+.|+..+-+..|+..|+++|... .+-.+..++-||-++.-+.++++..|.+.+|+..++++
T Consensus 96 ~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~l 175 (296)
T 1xqr_A 96 AGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRA 175 (296)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHH
Confidence 33345688888877778899999999999999999999864 45678899999999888899999999999999999999
Q ss_pred HhhcccccchhhhHHHHHHHHhh
Q 023132 203 IRDKQVDENLRLRCGEFLLLLIG 225 (287)
Q Consensus 203 lK~~qvd~~vRlKC~EFLl~yl~ 225 (287)
|++. +..+|-+.+-.|..+..
T Consensus 176 L~~~--d~~v~~~A~~aLs~L~~ 196 (296)
T 1xqr_A 176 MQQQ--VQKLKVKSAFLLQNLLV 196 (296)
T ss_dssp HHSS--CHHHHHHHHHHHHHHHH
T ss_pred HcCC--CHHHHHHHHHHHHHHHh
Confidence 9874 78888887755544433
No 9
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=95.60 E-value=0.29 Score=43.08 Aligned_cols=100 Identities=16% Similarity=0.103 Sum_probs=74.7
Q ss_pred hHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcch-hhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHH
Q 023132 124 DAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALE-QGACLDALTSLMLDSSANQLDFEACNGIEEVAEL 202 (287)
Q Consensus 124 dsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~le-q~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~l 202 (287)
..-...+.+.|.-.+.-++.++....+..+++.++++|....... +.++.-+ +.-|-.++.|...+-+.+++..+.++
T Consensus 157 ~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~-L~~l~~~~~~~~~~~~~g~~~~L~~l 235 (529)
T 1jdh_A 157 VKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRV-LKVLSVCSSNKPAIVEAGGMQALGLH 235 (529)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHH-HHHHTTSTTHHHHHHHTTHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHhCChHHHHHHHHHH-HHHHhcCcccHHHHHHCCCHHHHHHH
Confidence 333455566666666667888888888899999999998754332 2334433 44556789999999999999999999
Q ss_pred HhhcccccchhhhHHHHHHHHhhh
Q 023132 203 IRDKQVDENLRLRCGEFLLLLIGH 226 (287)
Q Consensus 203 lK~~qvd~~vRlKC~EFLl~yl~~ 226 (287)
+++. +.+++..|+..|.-+..+
T Consensus 236 l~~~--~~~~~~~a~~~L~~l~~~ 257 (529)
T 1jdh_A 236 LTDP--SQRLVQNCLWTLRNLSDA 257 (529)
T ss_dssp TTSS--CHHHHHHHHHHHHHHHTT
T ss_pred HhCC--ChHHHHHHHHHHHHHhcC
Confidence 9876 788999998887776654
No 10
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=94.90 E-value=0.041 Score=50.22 Aligned_cols=109 Identities=9% Similarity=0.064 Sum_probs=83.8
Q ss_pred ccccCCCChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcc------hhhhHHHHHHHHHhCCChhhhh
Q 023132 116 MRVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGAL------EQGACLDALTSLMLDSSANQLD 189 (287)
Q Consensus 116 ~kitsp~TdsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~l------eq~AcLDtLl~llvDSs~Nq~d 189 (287)
+++-..+++.=..-|...|.-++- +++.+....+ .++.-|+++|....+. .+.+++++|-.++-.++.+.+.
T Consensus 337 v~LL~~~~~~v~~~A~~aL~nls~-~~~~~~~i~~-~~i~~Lv~lL~~~~~~~~~~~~v~~~~l~~l~ni~~~~~~~~~~ 414 (457)
T 1xm9_A 337 ARLLQSGNSDVVRSGASLLSNMSR-HPLLHRVMGN-QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQ 414 (457)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHHT-SGGGHHHHHH-HTHHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTCTHHHHH
T ss_pred HHHHhCCCHhHHHHHHHHHHHHhc-CHHHHHHHHH-hhhHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 566655555444446666665554 6777777766 5999999999875442 5579999999999999999999
Q ss_pred hhhhccHHHHHHHHhhcccccchhhhHHHHHHHHhhhc
Q 023132 190 FEACNGIEEVAELIRDKQVDENLRLRCGEFLLLLIGHV 227 (287)
Q Consensus 190 FE~~~Gl~~Va~llK~~qvd~~vRlKC~EFLl~yl~~~ 227 (287)
|+++.|++++.++++.. .+++++-|....|.-|..|.
T Consensus 415 i~~~g~l~~L~~L~~~~-~~~~i~~~A~~~L~~~~~~~ 451 (457)
T 1xm9_A 415 YFSSSMLNNIINLCRSS-ASPKAAEAARLLLSDMWSSK 451 (457)
T ss_dssp HCCHHHHHHHHHHHHCT-TCHHHHHHHHHHHHTTSSST
T ss_pred HHHcCCHHHHHHHHcCC-CcHHHHHHHHHHHHHHHcch
Confidence 99999999999999965 46788888888887766553
No 11
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=94.87 E-value=0.16 Score=46.05 Aligned_cols=102 Identities=16% Similarity=0.070 Sum_probs=85.5
Q ss_pred hHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHH
Q 023132 124 DAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELI 203 (287)
Q Consensus 124 dsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~ll 203 (287)
+.-...|+++|.-.+--.+.++.......++..|+++|....+-.+..++.+|-.+--|++.+...+-+.+++..+.+++
T Consensus 145 ~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll 224 (530)
T 1wa5_B 145 EMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLF 224 (530)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGG
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHHHHh
Confidence 33445577888777776777888887888999999999988888899999999999999999988888899999999999
Q ss_pred hhcccccchhhhHHHHHHHHhhhc
Q 023132 204 RDKQVDENLRLRCGEFLLLLIGHV 227 (287)
Q Consensus 204 K~~qvd~~vRlKC~EFLl~yl~~~ 227 (287)
++ .+.++|..++..|.-+..+.
T Consensus 225 ~~--~~~~v~~~a~~~L~~L~~~~ 246 (530)
T 1wa5_B 225 NS--NKPSLIRTATWTLSNLCRGK 246 (530)
T ss_dssp GS--CCHHHHHHHHHHHHHHHCCS
T ss_pred cc--CCHHHHHHHHHHHHHHhCCC
Confidence 98 67889988888887766543
No 12
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=94.81 E-value=0.69 Score=39.66 Aligned_cols=102 Identities=17% Similarity=0.030 Sum_probs=81.2
Q ss_pred HHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHHh
Q 023132 125 AEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIR 204 (287)
Q Consensus 125 sEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~llK 204 (287)
.--..|+++|...+--.++.+....+..++..++.+|....+-.+..++.+|-.+.-|++.+...+-+.+++..+.++++
T Consensus 80 ~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~ 159 (450)
T 2jdq_A 80 TLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFS 159 (450)
T ss_dssp HHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhc
Confidence 33445777777776655555555566789999999999877788899999999999999888888888899999999998
Q ss_pred hcccccchhhhHHHHHHHHhhhc
Q 023132 205 DKQVDENLRLRCGEFLLLLIGHV 227 (287)
Q Consensus 205 ~~qvd~~vRlKC~EFLl~yl~~~ 227 (287)
+ ..+.++|..++..|.-+..+.
T Consensus 160 ~-~~~~~v~~~a~~~L~~l~~~~ 181 (450)
T 2jdq_A 160 K-QNRLTMTRNAVWALSNLCRGK 181 (450)
T ss_dssp S-CCCHHHHHHHHHHHHHHHCCS
T ss_pred C-CCCHHHHHHHHHHHHHHhCCC
Confidence 4 346789999998887776543
No 13
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=94.13 E-value=1.3 Score=39.87 Aligned_cols=109 Identities=8% Similarity=0.063 Sum_probs=86.9
Q ss_pred ccccCCCChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhc-CcchhhhHHHHHHHHHhCCChhhhhhhhhc
Q 023132 116 MRVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTR-GALEQGACLDALTSLMLDSSANQLDFEACN 194 (287)
Q Consensus 116 ~kitsp~TdsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~r-g~leq~AcLDtLl~llvDSs~Nq~dFE~~~ 194 (287)
+++-..+.+.-..-|+++|--+|--.+..+...-...++..|+++|... .+..+..+.-+|-.+.-.++.+...+-+.+
T Consensus 292 v~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~~~~~~~~~~~~~ 371 (528)
T 4b8j_A 292 VELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAG 371 (528)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTSCHHHHHHHHHTT
T ss_pred HHHHcCCChhHHHHHHHHHHHHHcCCHHHHHHHHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
Confidence 3334444556667799999888877777777777889999999999987 777888888887777777777777777889
Q ss_pred cHHHHHHHHhhcccccchhhhHHHHHHHHhhh
Q 023132 195 GIEEVAELIRDKQVDENLRLRCGEFLLLLIGH 226 (287)
Q Consensus 195 Gl~~Va~llK~~qvd~~vRlKC~EFLl~yl~~ 226 (287)
++..+.+++++. +.++|..++..|.-+..+
T Consensus 372 ~i~~L~~lL~~~--~~~v~~~a~~aL~nl~~~ 401 (528)
T 4b8j_A 372 IIGPLVNLLQTA--EFDIKKEAAWAISNATSG 401 (528)
T ss_dssp CHHHHHHHHHHS--CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcC--CHHHHHHHHHHHHHHHcC
Confidence 999999999876 789999998888777655
No 14
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=93.95 E-value=0.23 Score=44.66 Aligned_cols=102 Identities=13% Similarity=0.005 Sum_probs=86.0
Q ss_pred hHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHH
Q 023132 124 DAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELI 203 (287)
Q Consensus 124 dsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~ll 203 (287)
+.--..|+..|.-.+--++..+....+..++..|+++|....+-.+..++-+|-.+--|++.+...+-+.+++..+..++
T Consensus 132 ~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll~lL 211 (528)
T 4b8j_A 132 PQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQL 211 (528)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHCCcHHHHHHHH
Confidence 44445688888888877788888888899999999999988788899999999999999999999999999999999999
Q ss_pred hhcccccchhhhHHHHHHHHhhh
Q 023132 204 RDKQVDENLRLRCGEFLLLLIGH 226 (287)
Q Consensus 204 K~~qvd~~vRlKC~EFLl~yl~~ 226 (287)
++. .+.+++-.++..|.-+..+
T Consensus 212 ~~~-~~~~v~~~a~~~L~~L~~~ 233 (528)
T 4b8j_A 212 NEH-TKLSMLRNATWTLSNFCRG 233 (528)
T ss_dssp CTT-CCHHHHHHHHHHHHHHHCS
T ss_pred hcC-CCHHHHHHHHHHHHHHHcC
Confidence 643 4778888888877766554
No 15
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=93.77 E-value=0.2 Score=47.00 Aligned_cols=103 Identities=14% Similarity=0.124 Sum_probs=80.2
Q ss_pred ccCCCChHHHH-HHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccH
Q 023132 118 VTSPSTDAEVA-LALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGI 196 (287)
Q Consensus 118 itsp~TdsEia-LALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl 196 (287)
+++..++.+|. .+++.|--++ .++..+....+..+++.|+++|....+-.|.+++-+|--+. ..+++...|++..|+
T Consensus 423 ~~~~~~~~~v~~~a~~aL~~La-~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~l~-~~~~~~~~i~~~g~l 500 (644)
T 2z6h_A 423 FVEGVRMEEIVEGCTGALHILA-RDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELA-QDKEAAEAIEAEGAT 500 (644)
T ss_dssp -CCSSCHHHHHHHHHHHHHHHT-TSHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHH-TSHHHHHHHHHTTCH
T ss_pred hcccccHHHHHHHHHHHHHHHh-cCHHHHHHHHhCCcHHHHHHHHcCCCHHHHHHHHHHHHHHH-cCHHHHHHHHHcCCh
Confidence 34455777875 4667776555 46677888888899999999998877778888887766654 558899999999999
Q ss_pred HHHHHHHhhcccccchhhhHHHHHHHHh
Q 023132 197 EEVAELIRDKQVDENLRLRCGEFLLLLI 224 (287)
Q Consensus 197 ~~Va~llK~~qvd~~vRlKC~EFLl~yl 224 (287)
+.+.+++++. +++||..|+.-|.-+.
T Consensus 501 ~~L~~ll~~~--~~~vr~~A~~aL~~l~ 526 (644)
T 2z6h_A 501 APLTELLHSR--NEGVATYAAAVLFRMS 526 (644)
T ss_dssp HHHHHHTTCS--CHHHHHHHHHHHHHHT
T ss_pred hHHHHHHcCC--CHHHHHHHHHHHHHHh
Confidence 9999999865 7789988888776553
No 16
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=93.44 E-value=0.15 Score=44.83 Aligned_cols=96 Identities=16% Similarity=0.196 Sum_probs=77.6
Q ss_pred hHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHH
Q 023132 124 DAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELI 203 (287)
Q Consensus 124 dsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~ll 203 (287)
+.-...|++.|.-+|.-++..+....+..++..++++|....+-.+..+.++|-.+-.+++++...+-+.+|++.+.+++
T Consensus 115 ~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll 194 (529)
T 1jdh_A 115 DSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIM 194 (529)
T ss_dssp HHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHH
Confidence 44456789999888888888888888899999999999886666778888888888888999999999999999999999
Q ss_pred hhcccccchhhhHHHHH
Q 023132 204 RDKQVDENLRLRCGEFL 220 (287)
Q Consensus 204 K~~qvd~~vRlKC~EFL 220 (287)
++. .++.++..++..|
T Consensus 195 ~~~-~~~~~~~~a~~~L 210 (529)
T 1jdh_A 195 RTY-TYEKLLWTTSRVL 210 (529)
T ss_dssp HHC-CCHHHHHHHHHHH
T ss_pred HhC-ChHHHHHHHHHHH
Confidence 975 3444554444443
No 17
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=93.32 E-value=0.36 Score=42.85 Aligned_cols=102 Identities=11% Similarity=0.082 Sum_probs=83.3
Q ss_pred ChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHH
Q 023132 123 TDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAEL 202 (287)
Q Consensus 123 TdsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~l 202 (287)
.+.-..-|+..|--.|--+++.....-...++..|+++|....+-.|....=+|-.+.-.++++...|-+.+++..++++
T Consensus 138 ~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~L 217 (296)
T 1xqr_A 138 CDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVAL 217 (296)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHHH
Confidence 34455668888887777778877666677899999999998877788777777777777788889999999999999999
Q ss_pred HhhcccccchhhhHHHHHHHHhhh
Q 023132 203 IRDKQVDENLRLRCGEFLLLLIGH 226 (287)
Q Consensus 203 lK~~qvd~~vRlKC~EFLl~yl~~ 226 (287)
|+.. +.++|-+++.-|.-++..
T Consensus 218 L~~~--d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 218 VRTE--HSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HTSC--CSTHHHHHHHHHHHHHTT
T ss_pred HcCC--ChhHHHHHHHHHHHHHhC
Confidence 9876 778999999988766654
No 18
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=92.41 E-value=0.38 Score=47.26 Aligned_cols=105 Identities=13% Similarity=0.121 Sum_probs=83.1
Q ss_pred ccCCCChHHHH-HHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccH
Q 023132 118 VTSPSTDAEVA-LALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGI 196 (287)
Q Consensus 118 itsp~TdsEia-LALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl 196 (287)
+++..++.+|. .+++.|.-+| .++.++....+..+++.|+++|....+-.|.++.-+|-.+.- .+++...|++..|+
T Consensus 559 ~~~~~~~~~v~~~a~~aL~~La-~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~-~~~~~~~i~~~g~i 636 (780)
T 2z6g_A 559 FVEGVRMEEIVEACTGALHILA-RDIHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQ-DKEAAEAIEAEGAT 636 (780)
T ss_dssp CSTTCCHHHHHHHHHHHHHHHT-TSHHHHHHHHHTCCHHHHHHGGGCSCHHHHHHHHHHHHHHHT-SHHHHHHHHHTTCH
T ss_pred hhcccChHHHHHHHHHHHHHHh-cChhhHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHCCCH
Confidence 44556667764 4677776666 467788888888999999999999888889998888776654 47889999999999
Q ss_pred HHHHHHHhhcccccchhhhHHHHHHHHhhh
Q 023132 197 EEVAELIRDKQVDENLRLRCGEFLLLLIGH 226 (287)
Q Consensus 197 ~~Va~llK~~qvd~~vRlKC~EFLl~yl~~ 226 (287)
+.+.+++++. +++||-.|..-|.-+..+
T Consensus 637 ~~L~~Ll~~~--~~~Vr~~A~~aL~~l~~~ 664 (780)
T 2z6g_A 637 APLTELLHSR--NEGVATYAAAVLFRMSED 664 (780)
T ss_dssp HHHHHGGGCS--CHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCC--CHHHHHHHHHHHHHHHcC
Confidence 9999999864 688999888877665543
No 19
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=92.09 E-value=0.49 Score=41.20 Aligned_cols=103 Identities=17% Similarity=0.298 Sum_probs=82.1
Q ss_pred ccCCCChHH-HHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccH
Q 023132 118 VTSPSTDAE-VALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGI 196 (287)
Q Consensus 118 itsp~TdsE-iaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl 196 (287)
+.+|..+.+ ...|...|+-.|.-+++.+....+..+|..|+++|....+-.|..-.-+|.-+=.+++.|....-+..||
T Consensus 17 L~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~GaI 96 (233)
T 3tt9_A 17 LEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGV 96 (233)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHH
T ss_pred hCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCCH
Confidence 455554323 3457778888888888999999999999999999998878889988999999989999999999999999
Q ss_pred HHHHHHHhhcccccchhhhHHHHHH
Q 023132 197 EEVAELIRDKQVDENLRLRCGEFLL 221 (287)
Q Consensus 197 ~~Va~llK~~qvd~~vRlKC~EFLl 221 (287)
..++++|+..+ +.+++-.++--|+
T Consensus 97 ~~Lv~lL~~~~-~~~~~e~a~~aL~ 120 (233)
T 3tt9_A 97 PRLLQVLKQTR-DLETKKQITGLLW 120 (233)
T ss_dssp HHHHHHHHHCC-CHHHHHHHHHHHH
T ss_pred HHHHHHHccCC-CHHHHHHHHHHHH
Confidence 99999999743 4455544443333
No 20
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=91.71 E-value=0.47 Score=44.54 Aligned_cols=99 Identities=15% Similarity=0.189 Sum_probs=80.6
Q ss_pred ChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHH
Q 023132 123 TDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAEL 202 (287)
Q Consensus 123 TdsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~l 202 (287)
.+.-...|+..|.-+|-....++....+..++..|+++|....+-.+.+++++|-.+-..+++|...+-+..|+..+.++
T Consensus 111 ~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~~~~~~~i~~~g~v~~Lv~l 190 (644)
T 2z6h_A 111 VDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNI 190 (644)
T ss_dssp SHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcCCHHHHHHHHHHHHHHHhcCcHHHHHHHHcCChHHHHHH
Confidence 45556678888888888888888888888999999999998777778888888888888899999999999999999999
Q ss_pred HhhcccccchhhhHHHHHHH
Q 023132 203 IRDKQVDENLRLRCGEFLLL 222 (287)
Q Consensus 203 lK~~qvd~~vRlKC~EFLl~ 222 (287)
+++.. ++.++..|+..|.-
T Consensus 191 L~~~~-~~~~~~~a~~~L~n 209 (644)
T 2z6h_A 191 MRTYT-YEKLLWTTSRVLKV 209 (644)
T ss_dssp HTTCC-CHHHHHHHHHHHHH
T ss_pred HHcCC-hHHHHHHHHHHHHH
Confidence 98763 45566555554433
No 21
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=91.59 E-value=0.91 Score=38.90 Aligned_cols=103 Identities=13% Similarity=0.018 Sum_probs=78.0
Q ss_pred CChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhC-CChhhhhhhhhccHHHHH
Q 023132 122 STDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLD-SSANQLDFEACNGIEEVA 200 (287)
Q Consensus 122 ~TdsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvD-Ss~Nq~dFE~~~Gl~~Va 200 (287)
+...-..-|++.|..++--++..........++..++++|....+-.|.++.-+|-.+..+ ++++...+-+.+++..+.
T Consensus 288 ~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~i~~L~ 367 (450)
T 2jdq_A 288 PKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLC 367 (450)
T ss_dssp SSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHH
Confidence 3344444577777766655555555555568899999999988777888888888888777 556666677788999999
Q ss_pred HHHhhcccccchhhhHHHHHHHHhhh
Q 023132 201 ELIRDKQVDENLRLRCGEFLLLLIGH 226 (287)
Q Consensus 201 ~llK~~qvd~~vRlKC~EFLl~yl~~ 226 (287)
+++++. +.++|..|.+.|.-++..
T Consensus 368 ~ll~~~--~~~v~~~a~~aL~~l~~~ 391 (450)
T 2jdq_A 368 DLLTVM--DSKIVQVALNGLENILRL 391 (450)
T ss_dssp HGGGSS--CHHHHHHHHHHHHHHHHH
T ss_pred HHhcCC--CHHHHHHHHHHHHHHHHh
Confidence 999975 788999999998776653
No 22
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=91.00 E-value=5.2 Score=36.12 Aligned_cols=102 Identities=9% Similarity=-0.018 Sum_probs=78.3
Q ss_pred ChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHH
Q 023132 123 TDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAEL 202 (287)
Q Consensus 123 TdsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~l 202 (287)
.+.-..-|+++|--+|--++..+...-...++..++++|....+..+.+++-+|-.+.-.++.+...+-+.+++..+.++
T Consensus 312 ~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~l 391 (530)
T 1wa5_B 312 STLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKL 391 (530)
T ss_dssp CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHcCCHHHHHHHHHcchHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHH
Confidence 34444567888877776666666666667899999999988777788888888877776677776777778999999999
Q ss_pred HhhcccccchhhhHHHHHHHHhhh
Q 023132 203 IRDKQVDENLRLRCGEFLLLLIGH 226 (287)
Q Consensus 203 lK~~qvd~~vRlKC~EFLl~yl~~ 226 (287)
+++. +.++|..++.-|--+..+
T Consensus 392 L~~~--~~~v~~~a~~aL~~l~~~ 413 (530)
T 1wa5_B 392 LEVA--EYKTKKEACWAISNASSG 413 (530)
T ss_dssp HHHS--CHHHHHHHHHHHHHHHHH
T ss_pred HhcC--CHHHHHHHHHHHHHHHhc
Confidence 9864 678998888887766654
No 23
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=89.20 E-value=0.92 Score=44.54 Aligned_cols=91 Identities=13% Similarity=0.187 Sum_probs=76.5
Q ss_pred ccccCCCChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhcc
Q 023132 116 MRVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNG 195 (287)
Q Consensus 116 ~kitsp~TdsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~G 195 (287)
+++-..+.+.-...|+..|--+|..+...+....+..++..++++|.....-.+..++++|-.+-.+++++...|-+..|
T Consensus 240 v~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~ 319 (780)
T 2z6g_A 240 VNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGG 319 (780)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhcCChHHHHHHHHcCC
Confidence 44444445566677999999999998999999988999999999998866667788888888777788999999999999
Q ss_pred HHHHHHHHhhc
Q 023132 196 IEEVAELIRDK 206 (287)
Q Consensus 196 l~~Va~llK~~ 206 (287)
++.+++++|+.
T Consensus 320 i~~Lv~lL~~~ 330 (780)
T 2z6g_A 320 PQALVNIMRTY 330 (780)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHhcC
Confidence 99999999975
No 24
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=87.80 E-value=2.9 Score=38.43 Aligned_cols=107 Identities=13% Similarity=0.094 Sum_probs=84.5
Q ss_pred ccccCCCChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCCh-hhhhhhhhc
Q 023132 116 MRVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSA-NQLDFEACN 194 (287)
Q Consensus 116 ~kitsp~TdsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~-Nq~dFE~~~ 194 (287)
+++-+.+.+.-...|...|--++--.+..+.....+.++..++++|.....-.|..+.=+|--+....+. +...+-+..
T Consensus 322 ~~LL~~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~g 401 (510)
T 3ul1_B 322 PSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCG 401 (510)
T ss_dssp C-CTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTT
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHCC
Confidence 4444444555556678888888887888888888999999999999998888888888888888776554 446678899
Q ss_pred cHHHHHHHHhhcccccchhhhHHHHHHHHh
Q 023132 195 GIEEVAELIRDKQVDENLRLRCGEFLLLLI 224 (287)
Q Consensus 195 Gl~~Va~llK~~qvd~~vRlKC~EFLl~yl 224 (287)
++....++|+.. |.+++..+.+.|.-++
T Consensus 402 ~i~~L~~LL~~~--d~~i~~~~L~aL~nil 429 (510)
T 3ul1_B 402 IIEPLMNLLSAK--DTKIIQVILDAISNIF 429 (510)
T ss_dssp CHHHHHHGGGCS--CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhcCC--CHHHHHHHHHHHHHHH
Confidence 999999999864 7889999999886554
No 25
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=86.83 E-value=7.6 Score=36.70 Aligned_cols=179 Identities=13% Similarity=0.127 Sum_probs=124.5
Q ss_pred hhhhhHHHHHHHHHH--------------HHHHHHHHHHHHhhhhhhhcchhhHHHhchHHHHHHHhhhhccccchhhhh
Q 023132 23 AAATAVGELANSLKQ--------------QRVQREITLALRTGLRDARAEFSFLRVRGLRSLLKILRSVAESDSTIHFFC 88 (287)
Q Consensus 23 ~~~~~v~elv~sl~~--------------qR~yRevtlaLR~gLRDA~AeFSFlR~rglr~ll~fl~s~a~sd~~i~LF~ 88 (287)
..++++--||+-|.. ..+..|-+|+|..=...---++...|..|+=.+|+-++... +-.+++.+
T Consensus 67 ~~~g~~p~lv~~l~~~~~~~~~~~~~~~~~~~~~~a~~al~ni~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~ 144 (458)
T 3nmz_A 67 RQSGCLPLLIQLLHGNDKDSVLLGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAYC--ETCWEWQE 144 (458)
T ss_dssp HHHTCHHHHHHHHTCTTCCSCC---CCCCHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHH--HHHHHHHT
T ss_pred HHCCCHHHHHHHHhcccccccccccccCCHHHHHHHHHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhh--HHHHHHHH
Confidence 336788888888885 57888899999887766666788888888887888765532 22333332
Q ss_pred ccCCchhhhhhhccccccccccccCCCccccCCCChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhh-----
Q 023132 89 QSQSVPELQDSVDERVTSLDHIFTVDPMRVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILST----- 163 (287)
Q Consensus 89 ~sQs~~~lQ~~~~~~V~~l~hi~g~ep~kitsp~TdsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~----- 163 (287)
+.=+..| .++.+| .| +.+-++..|+..|-.+.- ++.++....+..+++.|+++|..
T Consensus 145 ~~~~~~~---~~~~~~--------~~-------~~~~~~~qAv~aL~nls~-~~e~R~~i~~~G~l~~Lv~LL~~~~~~~ 205 (458)
T 3nmz_A 145 AHEPGMD---QDKNPM--------PA-------PVEHQICPAVCVLMKLSF-DEEHRHAMNELGGLQAIAELLQVDCEMY 205 (458)
T ss_dssp TTSSSSC---CCSCC----------C-------CCTTTTHHHHHHHHHHTT-SHHHHHHHHHTTHHHHHHHHHHHHHHHS
T ss_pred hhccccc---cccCCc--------cc-------hhhHHHHHHHHHHHHhcC-CHHHHHHHHHCCCHHHHHHHHhhhhccc
Confidence 2100000 000011 11 456678899999988744 69999999999999999999953
Q ss_pred ------cCcchhhhHHHHHHHHHhCCChhhhhhhhhcc-HHHHHHHHhhcccccchhhhHHHHHHHHh
Q 023132 164 ------RGALEQGACLDALTSLMLDSSANQLDFEACNG-IEEVAELIRDKQVDENLRLRCGEFLLLLI 224 (287)
Q Consensus 164 ------rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~G-l~~Va~llK~~qvd~~vRlKC~EFLl~yl 224 (287)
..+..|....-+|--+-.+.+.|...+.+..| |..++++|+. -+++++-.++--|.-+.
T Consensus 206 ~~~~~~~~~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s--~~~~v~~~A~~aL~nLs 271 (458)
T 3nmz_A 206 GLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKS--ESEDLQQVIASVLRNLS 271 (458)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGC--SCHHHHHHHHHHHHHHT
T ss_pred ccccCCCCHHHHHHHHHHHHHHhCCCcccHHHHHHcCCcHHHHHHHHhC--CCHHHHHHHHHHHHHHh
Confidence 11335777778888888888888888888889 9999999983 45677766665554443
No 26
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=85.81 E-value=5.5 Score=40.44 Aligned_cols=142 Identities=13% Similarity=0.157 Sum_probs=95.7
Q ss_pred HHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCc----chhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHHhh
Q 023132 130 ALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGA----LEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRD 205 (287)
Q Consensus 130 ALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~----leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~llK~ 205 (287)
|+-+|.-.+=-++....+..--.|.+.+++|+...|. ..+.-||-.+-.++=..++||.-|-|.+++.+++.+++-
T Consensus 186 allLL~~Lt~~n~~iQklVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~N~sNQ~~FrEt~~i~~L~~LL~~ 265 (651)
T 3grl_A 186 GVLLLQALTRSNGAIQKIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEV 265 (651)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGGGGGGGCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHHHHhcCHHHHHHHHHcCCHHHHHHHhCC
Confidence 7777777777788888888888999999999999776 678899999999999999999999999999999999974
Q ss_pred cccccch------hhhHHHHHHHHhhhccCCCCCCccc--HHHHHHHHhchhhHHHHHHhhhhcCCCChHHhHHHHHHHH
Q 023132 206 KQVDENL------RLRCGEFLLLLIGHVNGRQLSPMAT--IHEDIRRLLGEKSASLIWAASQFGSTLNPEERLMALHIQA 277 (287)
Q Consensus 206 ~qvd~~v------RlKC~EFLl~yl~~~~~~~~~~~a~--~~ed~~~llGe~~asliwaa~~fgstlD~e~r~~aL~~qA 277 (287)
+++. |+++.-..+..+.-.-..++++-.+ -|..+.+ ......+... -|++.....-|..|+.--|
T Consensus 266 ---~~~~~~W~~Qk~~N~~~~L~iIrlLv~~~~~~~~t~~nQ~~~~~---~g~l~~Ll~l-l~~~~~p~~i~~~Al~tla 338 (651)
T 3grl_A 266 ---GDENSGWSAQKVTNLHLMLQLVRVLVSPNNPPGATSSCQKAMFQ---CGLLQQLCTI-LMATGVPADILTETINTVS 338 (651)
T ss_dssp ---CSCSSCCCHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHH---TTHHHHHHHH-HTCSSCCHHHHHHHHHHHH
T ss_pred ---CccccccHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---CCCHHHHHHH-HccCCCCHHHHHHHHHHHH
Confidence 3344 6777555444444333333331111 2222222 1111122221 3446666677777776555
Q ss_pred H
Q 023132 278 R 278 (287)
Q Consensus 278 ~ 278 (287)
.
T Consensus 339 ~ 339 (651)
T 3grl_A 339 E 339 (651)
T ss_dssp H
T ss_pred H
Confidence 4
No 27
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=85.79 E-value=3 Score=38.33 Aligned_cols=107 Identities=14% Similarity=0.102 Sum_probs=83.0
Q ss_pred ccccCCCChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCCh-hhhhhhhhc
Q 023132 116 MRVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSA-NQLDFEACN 194 (287)
Q Consensus 116 ~kitsp~TdsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~-Nq~dFE~~~ 194 (287)
+++-+.+.+.-...|..+|--+|--.+......-.+.++..++++|.....-.|..+.=+|-.+...++. +...+-+..
T Consensus 341 ~~LL~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~~g 420 (529)
T 3tpo_A 341 PSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIVYLVHCG 420 (529)
T ss_dssp HHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTT
T ss_pred HHHHcCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCc
Confidence 3333334444445677888888877888888888889999999999998888888888888888776544 456678899
Q ss_pred cHHHHHHHHhhcccccchhhhHHHHHHHHh
Q 023132 195 GIEEVAELIRDKQVDENLRLRCGEFLLLLI 224 (287)
Q Consensus 195 Gl~~Va~llK~~qvd~~vRlKC~EFLl~yl 224 (287)
+|....++|+.. |.+++..|.+.|.-++
T Consensus 421 ~i~~L~~LL~~~--d~~i~~~~L~aL~nil 448 (529)
T 3tpo_A 421 IIEPLMNLLSAK--DTKIIQVILDAISNIF 448 (529)
T ss_dssp CHHHHHHGGGCS--CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhcCC--CHHHHHHHHHHHHHHH
Confidence 999999999754 7889988888876554
No 28
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=85.09 E-value=1.5 Score=39.73 Aligned_cols=101 Identities=16% Similarity=0.173 Sum_probs=80.8
Q ss_pred CChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhc-----------CcchhhhHHHHHHHHHhCCChhhhhh
Q 023132 122 STDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTR-----------GALEQGACLDALTSLMLDSSANQLDF 190 (287)
Q Consensus 122 ~TdsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~r-----------g~leq~AcLDtLl~llvDSs~Nq~dF 190 (287)
|++-++..|++.|.-.+- +++++.+..+..+++.|+++|... .+-.|....-+|--+-.+++.|...+
T Consensus 44 ~~~~~~~~A~~aL~nls~-d~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~~q~~Aa~aL~nLa~~~~~~k~~i 122 (354)
T 3nmw_A 44 PVEHQICPAVCVLMKLSF-DEEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATL 122 (354)
T ss_dssp GGGGTHHHHHHHHHHHHT-SHHHHHHHHHTTHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTSSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHcC-CHHHHHHHHHcCCHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 567788899999998886 489999999999999999999631 13457778888888888888888888
Q ss_pred hhhcc-HHHHHHHHhhcccccchhhhHHHHHHHHhh
Q 023132 191 EACNG-IEEVAELIRDKQVDENLRLRCGEFLLLLIG 225 (287)
Q Consensus 191 E~~~G-l~~Va~llK~~qvd~~vRlKC~EFLl~yl~ 225 (287)
....| |...+++|+. -+++++-..+-.|.-+..
T Consensus 123 ~~~~GaIp~LV~LL~s--~~~~v~~~A~~aL~nLs~ 156 (354)
T 3nmw_A 123 CSMKGCMRALVAQLKS--ESEDLQQVIASVLRNLSW 156 (354)
T ss_dssp HHCHHHHHHHHHGGGC--SCHHHHHHHHHHHHHHHT
T ss_pred HHcCCcHHHHHHHHCC--CCHHHHHHHHHHHHHHhc
Confidence 88889 9999999984 456777776666655543
No 29
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=84.90 E-value=2 Score=39.41 Aligned_cols=81 Identities=15% Similarity=0.030 Sum_probs=70.7
Q ss_pred HHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHHhhcc
Q 023132 128 ALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRDKQ 207 (287)
Q Consensus 128 aLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~llK~~q 207 (287)
..|.++|--++--.+..+...-...||..|+.+|....+-.|..|+-+|-.|-.|++.+...+-++.|+..+..+++...
T Consensus 138 ~~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~i~~Ll~lL~~~~ 217 (529)
T 3tpo_A 138 FESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAFRDLVIKHGAIDPLLALLAVPD 217 (529)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHTTCSSC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHHHHHHHHHcCCcHHHHHHHhccc
Confidence 34778888877777777778888899999999998888889999999999999999999999999999999999998654
Q ss_pred c
Q 023132 208 V 208 (287)
Q Consensus 208 v 208 (287)
.
T Consensus 218 ~ 218 (529)
T 3tpo_A 218 L 218 (529)
T ss_dssp G
T ss_pred h
Confidence 3
No 30
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=83.52 E-value=2.7 Score=41.37 Aligned_cols=89 Identities=21% Similarity=0.344 Sum_probs=75.7
Q ss_pred hHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHh-CCChhhhhhhhhccHHHHHHH
Q 023132 124 DAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLML-DSSANQLDFEACNGIEEVAEL 202 (287)
Q Consensus 124 dsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llv-DSs~Nq~dFE~~~Gl~~Va~l 202 (287)
+.....|...|.-.|.-+.+.|....+..+|..|+++|....+-.|....-+|--|-. |++.|....-++.||..++++
T Consensus 62 ~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~GaIp~LV~L 141 (584)
T 3l6x_A 62 DAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRL 141 (584)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHcCCHHHHHHH
Confidence 3334457788888898899999999999999999999998888889999999999988 589999999999999999999
Q ss_pred Hhhcccccchh
Q 023132 203 IRDKQVDENLR 213 (287)
Q Consensus 203 lK~~qvd~~vR 213 (287)
|+..+ +.+++
T Consensus 142 L~s~~-~~~~~ 151 (584)
T 3l6x_A 142 LRKAR-DMDLT 151 (584)
T ss_dssp HHHCC-SHHHH
T ss_pred HcCCC-CHHHH
Confidence 99743 33444
No 31
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=83.31 E-value=3.4 Score=37.96 Aligned_cols=79 Identities=16% Similarity=0.053 Sum_probs=67.7
Q ss_pred HHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHHhhcc
Q 023132 129 LALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRDKQ 207 (287)
Q Consensus 129 LALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~llK~~q 207 (287)
.|.++|--.+--.+..+...-+..||..|+.+|....+-.|..|+-+|--+-.|++.+...+-+..|+..+..+++...
T Consensus 120 ~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~lL~~~~ 198 (510)
T 3ul1_B 120 ESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPD 198 (510)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSC
T ss_pred HHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCChHHHHHHHHhcc
Confidence 4666666665556667777778899999999999888889999999999999999999999999999999999998654
No 32
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=82.20 E-value=3.1 Score=37.67 Aligned_cols=97 Identities=11% Similarity=0.143 Sum_probs=76.4
Q ss_pred HHHHHHHhhhcc---cCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHHh
Q 023132 128 ALALRVLEGCCL---LHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIR 204 (287)
Q Consensus 128 aLALrVLeGccL---Lh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~llK 204 (287)
.-|..+|.-++- -++..+....++.++..|+++|.....-.|..+.-+|--+-..++.|...+-+..|+....++++
T Consensus 236 ~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~i~~Lv~LL~ 315 (354)
T 3nmw_A 236 ESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIH 315 (354)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHTTTT
T ss_pred HHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHh
Confidence 345555555554 47788888889999999999999877778888888887776688999999999999999999998
Q ss_pred hcccccchhhhHHHHHHHHhhh
Q 023132 205 DKQVDENLRLRCGEFLLLLIGH 226 (287)
Q Consensus 205 ~~qvd~~vRlKC~EFLl~yl~~ 226 (287)
.. ++++|..++.=|.-+..+
T Consensus 316 s~--~~~i~~~A~~aL~nL~~~ 335 (354)
T 3nmw_A 316 SK--HKMIAMGSAAALRNLMAN 335 (354)
T ss_dssp CS--SHHHHHHHHHHHHHHHTT
T ss_pred CC--CHHHHHHHHHHHHHHHcC
Confidence 64 667887777666655543
No 33
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=80.97 E-value=8.9 Score=38.93 Aligned_cols=192 Identities=16% Similarity=0.194 Sum_probs=122.4
Q ss_pred hhhhhHHHHHHHHHHHHH---HHHHHHHHHhhhhhhhcchhhHHHhchHHHHHHHhhhhccc--------cchhhhhccC
Q 023132 23 AAATAVGELANSLKQQRV---QREITLALRTGLRDARAEFSFLRVRGLRSLLKILRSVAESD--------STIHFFCQSQ 91 (287)
Q Consensus 23 ~~~~~v~elv~sl~~qR~---yRevtlaLR~gLRDA~AeFSFlR~rglr~ll~fl~s~a~sd--------~~i~LF~~sQ 91 (287)
.++..+..|++-++---+ .|+--++||.=-|+.++++. .+||+.|+..|+.-.+-+ .-..+|+...
T Consensus 18 s~~etI~~L~~Rl~~~tl~eDRR~Av~~Lk~~sk~y~~~Vg---~~~l~~li~~L~~d~~D~e~v~~~LetL~~l~~~~~ 94 (651)
T 3grl_A 18 TEAETIQKLCDRVASSTLLDDRRNAVRALKSLSKKYRLEVG---IQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDE 94 (651)
T ss_dssp CHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTTTTTTHHH---HHTHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC-
T ss_pred ChhhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHhHHHhh---hhhHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCC
Confidence 334445555544443322 36777888888888887765 789999999888743221 1224676442
Q ss_pred Cchh------------hh-----hhhccccccccccccCCCccccCCCChHHHHH-HHHHHhhhcccCcc--hHHHhhhh
Q 023132 92 SVPE------------LQ-----DSVDERVTSLDHIFTVDPMRVTSPSTDAEVAL-ALRVLEGCCLLHRE--SAILAHKH 151 (287)
Q Consensus 92 s~~~------------lQ-----~~~~~~V~~l~hi~g~ep~kitsp~TdsEiaL-ALrVLeGccLLh~~--s~~~a~r~ 151 (287)
.=++ ++ -.+.+.|..|=..+ .+.|-.+-+ +++.|+-.|...+. -+......
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL---------~~~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~p 165 (651)
T 3grl_A 95 EEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLL---------EEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSP 165 (651)
T ss_dssp -------------CHHHHHHHHHHHSTHHHHHHHHHT---------TCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHST
T ss_pred cccccccccccchHHHHHHHHHHHcCCccHHHHHHHh---------cCccHHHHHHHHHHHHHHHhcCcHHHHHHHHhCc
Confidence 1110 00 00111111111111 123434433 77888877777666 34455566
Q ss_pred HHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHHhhcccc--cchhhhHHHHHHHHhhh
Q 023132 152 KAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRDKQVD--ENLRLRCGEFLLLLIGH 226 (287)
Q Consensus 152 ~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~llK~~qvd--~~vRlKC~EFLl~yl~~ 226 (287)
.++.-|+++|.......+-..+..|..+-=+++..|+-+.--+|.+.+-++++..|-- -.|=-.|...|.-++-+
T Consensus 166 ~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~n~~iQklVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~ 242 (651)
T 3grl_A 166 MGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKN 242 (651)
T ss_dssp THHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHhCchHHHHHHHHHHHHHHhcCCHHHHHHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHHHHhc
Confidence 7888888888888888888888888888889999999999889999999999998862 23445788877766655
No 34
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=74.19 E-value=7.7 Score=36.65 Aligned_cols=97 Identities=11% Similarity=0.143 Sum_probs=77.3
Q ss_pred HHHHHHHhhhcc---cCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHHh
Q 023132 128 ALALRVLEGCCL---LHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIR 204 (287)
Q Consensus 128 aLALrVLeGccL---Lh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~llK 204 (287)
.-|..+|.-++- -++..+....++.++..|+++|.....-.|..+.-+|--+-..++.|...+-+..|+....++++
T Consensus 352 ~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~I~~Lv~LL~ 431 (458)
T 3nmz_A 352 ESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIH 431 (458)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHHSSCHHHHHHHHHHTHHHHHHTTTT
T ss_pred HHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCCChHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHh
Confidence 345556655554 57778888888999999999998877778888888888777788999999999999999999997
Q ss_pred hcccccchhhhHHHHHHHHhhh
Q 023132 205 DKQVDENLRLRCGEFLLLLIGH 226 (287)
Q Consensus 205 ~~qvd~~vRlKC~EFLl~yl~~ 226 (287)
.. ++.+|..++.=|.-+..+
T Consensus 432 s~--~~~v~~~Aa~AL~nL~~~ 451 (458)
T 3nmz_A 432 SK--HKMIAMGSAAALRNLMAN 451 (458)
T ss_dssp CS--SHHHHHHHHHHHHHHHTC
T ss_pred CC--CHHHHHHHHHHHHHHHcC
Confidence 64 677887777776665544
No 35
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=71.58 E-value=11 Score=37.17 Aligned_cols=106 Identities=13% Similarity=0.115 Sum_probs=74.3
Q ss_pred ccccCCCChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcC-c-------chhhhHHHHHHHHHhCCChhh
Q 023132 116 MRVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRG-A-------LEQGACLDALTSLMLDSSANQ 187 (287)
Q Consensus 116 ~kitsp~TdsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg-~-------leq~AcLDtLl~llvDSs~Nq 187 (287)
+++-..+++.-+.-|.+.|--++. ++..+... ...++.-|+.+|.... . -.+.+++=||-.|+-.++.|.
T Consensus 361 v~LL~s~~~~v~~~A~~aL~nLs~-~~~~~~~I-~~g~ip~LV~LL~~~~~~~~~~~s~~v~~~a~~tL~NL~a~~~~~~ 438 (584)
T 3l6x_A 361 ADLLTNEHERVVKAASGALRNLAV-DARNKELI-GKHAIPNLVKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEAA 438 (584)
T ss_dssp HHGGGCSCHHHHHHHHHHHHHHHT-TCSCHHHH-HHHHHHHHHHTSSSSSCSGGGTCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHhC-ChhHHHHH-HhCCHHHHHHHhcCCcccccccchHHHHHHHHHHHHHHhcCCHHHH
Confidence 555555666666667777777765 55566666 4579999999997642 1 234566777777788999999
Q ss_pred hhhhhhccHHHHHHHHhhcccccchhhhHHHHHHHH
Q 023132 188 LDFEACNGIEEVAELIRDKQVDENLRLRCGEFLLLL 223 (287)
Q Consensus 188 ~dFE~~~Gl~~Va~llK~~qvd~~vRlKC~EFLl~y 223 (287)
+..-+++||..++.++++....+.++--++-.|+-+
T Consensus 439 ~~I~~~g~I~~Lv~LL~s~~~~~~v~k~Aa~vL~nl 474 (584)
T 3l6x_A 439 KKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTI 474 (584)
T ss_dssp HHHHHTTHHHHHHHHHTCSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHCCChHHHHHHHhCCCCChHHHHHHHHHHHHH
Confidence 999999999999999998754555444444444433
No 36
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=54.44 E-value=30 Score=28.81 Aligned_cols=81 Identities=19% Similarity=0.258 Sum_probs=54.6
Q ss_pred ccCCCChHHHHHHHHHHhhhcccCcchHHHhhhhHHHH----HHHHHHhhc------CcchhhhHHHHHHHHHhCCChhh
Q 023132 118 VTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIK----ILMNILSTR------GALEQGACLDALTSLMLDSSANQ 187 (287)
Q Consensus 118 itsp~TdsEiaLALrVLeGccLLh~~s~~~a~r~~Ave----vllniL~~r------g~leq~AcLDtLl~llvDSs~Nq 187 (287)
|.++ +..+..+||.+|+-|.-+| -.-.|+..|-+ .|..++..+ .+..+.-+|..+-.. .
T Consensus 59 l~~~-n~~vql~AL~LLd~~vkNC---G~~Fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W-------~ 127 (171)
T 1juq_A 59 IQSP-QEWEALQALTVLEACMKNC---GRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSW-------T 127 (171)
T ss_dssp HTCS-SHHHHHHHHHHHHHHHHHS---HHHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHH-------H
T ss_pred hcCC-CHHHHHHHHHHHHHHHHHc---CHHHHHHHhhHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHH-------H
Confidence 3443 5678888999999998765 34455544444 444555422 134557777766655 4
Q ss_pred hhhhhhccHHHHHHHHhhcccc
Q 023132 188 LDFEACNGIEEVAELIRDKQVD 209 (287)
Q Consensus 188 ~dFE~~~Gl~~Va~llK~~qvd 209 (287)
..|...+++..+-+.||..|+.
T Consensus 128 ~~f~~~~~i~~~y~~Lk~~G~~ 149 (171)
T 1juq_A 128 MALPEEAKIKDAYHMLKRQGIV 149 (171)
T ss_dssp HHCTTCHHHHHHHHHHHHTTSC
T ss_pred HHcCCCcHHHHHHHHHHHCCCC
Confidence 4588888899999999999974
No 37
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=50.55 E-value=41 Score=27.40 Aligned_cols=83 Identities=24% Similarity=0.285 Sum_probs=50.3
Q ss_pred cccCCCChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHH-----HHHHHhhcCc---chhhhHHHHHHHHHhCCChhhh
Q 023132 117 RVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKI-----LMNILSTRGA---LEQGACLDALTSLMLDSSANQL 188 (287)
Q Consensus 117 kitsp~TdsEiaLALrVLeGccLLh~~s~~~a~r~~Avev-----llniL~~rg~---leq~AcLDtLl~llvDSs~Nq~ 188 (287)
||.+..+..+..+||.+|+-|.-+|- .-.|+..|-+- ++.++..++. ..+.-+|..+-.- ..
T Consensus 61 rl~~~~n~~v~l~AL~LLd~~vkNcG---~~fh~eva~~~fl~e~Lvk~~~~k~~~~~~Vk~kil~li~~W-------~~ 130 (157)
T 1elk_A 61 RIVGNKNFHEVMLALTVLETCVKNCG---HRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSW-------AD 130 (157)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHHHHSC---HHHHHHHTSHHHHHHHTHHHHSTTTCCCHHHHHHHHHHHHHH-------HH
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHhC---HHHHHHHhhHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHH-------HH
Confidence 34444566788899999999987763 23344344333 4445544332 3456777666554 33
Q ss_pred hhhh---hccHHHHHHHHhhcccc
Q 023132 189 DFEA---CNGIEEVAELIRDKQVD 209 (287)
Q Consensus 189 dFE~---~~Gl~~Va~llK~~qvd 209 (287)
.|+. +.++..+-+.||..|+.
T Consensus 131 ~f~~~p~l~~i~~~Y~~Lk~~G~~ 154 (157)
T 1elk_A 131 AFRSSPDLTGVVTIYEDLRRKGLE 154 (157)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHTCC
T ss_pred HcCCCcchHHHHHHHHHHHHcCCC
Confidence 5654 45567777788887763
No 38
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=49.86 E-value=57 Score=33.48 Aligned_cols=187 Identities=18% Similarity=0.133 Sum_probs=108.7
Q ss_pred hhhHHHHHHHHH--HHHHHHHHHHHHHhhhhhhhcchhhHHHhchHHHHHHHhhhhcc---ccchhhhhccCC-chhhhh
Q 023132 25 ATAVGELANSLK--QQRVQREITLALRTGLRDARAEFSFLRVRGLRSLLKILRSVAES---DSTIHFFCQSQS-VPELQD 98 (287)
Q Consensus 25 ~~~v~elv~sl~--~qR~yRevtlaLR~gLRDA~AeFSFlR~rglr~ll~fl~s~a~s---d~~i~LF~~sQs-~~~lQ~ 98 (287)
++++.-||.-|. ......+.+|+|..=-.|..--=..+..-|+..|+..|+|--.. .+.-.|++-+.+ =|+.
T Consensus 494 aGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d~~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~-- 571 (810)
T 3now_A 494 EGITTALCALAKTESHNSQELIARVLNAVCGLKELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINPEV-- 571 (810)
T ss_dssp TTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHH--
T ss_pred CcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHccCCHHHHHHHHHHHHHHhcCCChhh--
Confidence 356666666554 34667777777765433322222345556778888877652110 000011111100 0110
Q ss_pred hhccccccccccc-cCCC-ccccCCC-ChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHHHH
Q 023132 99 SVDERVTSLDHIF-TVDP-MRVTSPS-TDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDA 175 (287)
Q Consensus 99 ~~~~~V~~l~hi~-g~ep-~kitsp~-TdsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcLDt 175 (287)
+.....+. ++.| +++-++. +.....-|+..|-.++-.....+...-+-.++..++++|....+..|.+.+.+
T Consensus 572 -----~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~ 646 (810)
T 3now_A 572 -----SFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQC 646 (810)
T ss_dssp -----HTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHH
T ss_pred -----hhcchhhhcHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHH
Confidence 00000001 3344 4443333 33334468888888877766777777777899999999999999999999988
Q ss_pred HHHHHhCCChhhhhhhh-hccHHHHHHHHhhcccccchhhhHHHHHH
Q 023132 176 LTSLMLDSSANQLDFEA-CNGIEEVAELIRDKQVDENLRLRCGEFLL 221 (287)
Q Consensus 176 Ll~llvDSs~Nq~dFE~-~~Gl~~Va~llK~~qvd~~vRlKC~EFLl 221 (287)
+--+. =++.++..|.+ .+++.-...++.. -+.++|-..+=.|-
T Consensus 647 L~NLa-~~~~~~~~~v~~~g~l~~Lv~LL~s--~d~~vq~~Aa~ALa 690 (810)
T 3now_A 647 LCNLV-MSEDVIKMFEGNNDRVKFLALLCED--EDEETATACAGALA 690 (810)
T ss_dssp HHHHT-TSHHHHHHHHSSSSHHHHHHHGGGC--SSHHHHHHHHHHHH
T ss_pred HHHHh-CChHHHHHHHhccCcHHHHHHHhcC--CCHHHHHHHHHHHH
Confidence 76554 47788988885 5667777777765 35677765554433
No 39
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=47.03 E-value=73 Score=25.43 Aligned_cols=80 Identities=11% Similarity=0.084 Sum_probs=47.1
Q ss_pred ChHHHHHHHHHHhhhcccCcch-HHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhcc---HHH
Q 023132 123 TDAEVALALRVLEGCCLLHRES-AILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNG---IEE 198 (287)
Q Consensus 123 TdsEiaLALrVLeGccLLh~~s-~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~G---l~~ 198 (287)
+..+..+||.+|+-|.-+|-.- ....+.+.=++.+..++....+-.+.-||..+-+. ...|+..++ +..
T Consensus 55 n~~~ql~AL~LLe~~vkNcG~~f~~evas~~Fl~el~~l~~~~~~~Vk~kil~li~~W-------~~~f~~~~~l~~i~~ 127 (140)
T 3ldz_A 55 DPHVAMQALTLLGACVSNCGKIFHLEVCSRDFASEVSNVLNKGHPKVCEKLKALMVEW-------TDEFKNDPQLSLISA 127 (140)
T ss_dssp SHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHHHHHHHHHHSCHHHHHHHHHHHHHH-------HHHHTTCGGGTHHHH
T ss_pred ChHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHhccCCHHHHHHHHHHHHHH-------HHHhCCCCCchHHHH
Confidence 3467888999999998765331 11111222234455555444444556666655543 447776655 566
Q ss_pred HHHHHhhcccc
Q 023132 199 VAELIRDKQVD 209 (287)
Q Consensus 199 Va~llK~~qvd 209 (287)
+-+.||..|+.
T Consensus 128 ~Y~~Lk~~G~~ 138 (140)
T 3ldz_A 128 MIKNLKEQGVT 138 (140)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHccCc
Confidence 66788888763
No 40
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=46.50 E-value=47 Score=27.23 Aligned_cols=93 Identities=13% Similarity=0.129 Sum_probs=58.4
Q ss_pred hhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChh-hhhhhhhccHHHHHHHHhhc----ccccchhhhHHHHHHHH
Q 023132 149 HKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSAN-QLDFEACNGIEEVAELIRDK----QVDENLRLRCGEFLLLL 223 (287)
Q Consensus 149 ~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~N-q~dFE~~~Gl~~Va~llK~~----qvd~~vRlKC~EFLl~y 223 (287)
+-..|++.+..-|..+.+-+|--.|-.|=+++--+... +..+-.-.=++++.++++++ .++.+||-||.|.+.-+
T Consensus 45 ~pk~a~ral~krl~~~n~~v~l~AL~LLe~cvkNCG~~fh~eias~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W 124 (149)
T 3g2s_A 45 GPPLATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSW 124 (149)
T ss_dssp HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCCHHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHH
Confidence 44567777777777666777766665555555444433 24444444567788888764 68999999999988876
Q ss_pred hhhccCCCCCCcccHHHHHH
Q 023132 224 IGHVNGRQLSPMATIHEDIR 243 (287)
Q Consensus 224 l~~~~~~~~~~~a~~~ed~~ 243 (287)
-... +. .|.+..+.+.||
T Consensus 125 ~~~f-~~-~p~i~~~Y~~Lk 142 (149)
T 3g2s_A 125 TVGL-PE-EVKIAEAYQMLK 142 (149)
T ss_dssp HHHC-TT-CHHHHHHHHHHH
T ss_pred HHHh-CC-CchHHHHHHHHH
Confidence 5543 22 344444555544
No 41
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=44.47 E-value=25 Score=36.07 Aligned_cols=95 Identities=8% Similarity=-0.029 Sum_probs=72.0
Q ss_pred HHHHHhhhcccCc-chHHHhhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHHhhc-c
Q 023132 130 ALRVLEGCCLLHR-ESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRDK-Q 207 (287)
Q Consensus 130 ALrVLeGccLLh~-~s~~~a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~llK~~-q 207 (287)
|...|--.+--++ .+++...+..+++.|+++|.....-.|...+-++..+.-.++.+.....+.+|++.+.++++.. .
T Consensus 685 Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~~s~e~~~~l~e~G~i~~L~~LL~~~d~ 764 (810)
T 3now_A 685 CAGALAIITSVSVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMINAGEEIAKKLFETDIMELLSGLGQLPDD 764 (810)
T ss_dssp HHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHTSTHHHHHTTSCCCTTS
T ss_pred HHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHhCccc
Confidence 3344433333233 4566665578999999999988888899999999988887788899999999999999999875 2
Q ss_pred cccchhhhHHHHHHHHh
Q 023132 208 VDENLRLRCGEFLLLLI 224 (287)
Q Consensus 208 vd~~vRlKC~EFLl~yl 224 (287)
.+.+++-++.|-|--.+
T Consensus 765 ~~~~i~e~Al~aL~~ll 781 (810)
T 3now_A 765 TRAKAREVATQCLAAAE 781 (810)
T ss_dssp TTHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHH
Confidence 46677777776665554
No 42
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=35.59 E-value=1.1e+02 Score=25.03 Aligned_cols=77 Identities=9% Similarity=0.079 Sum_probs=45.6
Q ss_pred ChHHHHHHHHHHhhhcccCcchHHHhhhhHHH----HHHHHHHhh-cCcchhhhHHHHHHHHHhCCChhhhhhhhhc---
Q 023132 123 TDAEVALALRVLEGCCLLHRESAILAHKHKAI----KILMNILST-RGALEQGACLDALTSLMLDSSANQLDFEACN--- 194 (287)
Q Consensus 123 TdsEiaLALrVLeGccLLh~~s~~~a~r~~Av----evllniL~~-rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~--- 194 (287)
+..+..+||.+|+-|.-+| -...|...|- +.+..++.. ..+..+.-+|..+-.. ...|+..+
T Consensus 65 n~~vql~AL~LLd~~vkNc---G~~Fh~evas~~Fl~el~~l~~~~~~~~Vk~kil~li~~W-------~~~f~~~~~l~ 134 (163)
T 1x5b_A 65 VPHVALQALTLLGACVANC---GKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEW-------SEEFQKDPQFS 134 (163)
T ss_dssp SHHHHHHHHHHHHHHHHHT---CHHHHHHHTSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-------HHHTTTCSTTH
T ss_pred CHHHHHHHHHHHHHHHHHh---hHHHHHHHhhHHHHHHHHHHHccCCCHHHHHHHHHHHHHH-------HHHhcCCcccH
Confidence 3467788999999998764 3444444443 334455543 2234556666655433 33566644
Q ss_pred cHHHHHHHHhhcccc
Q 023132 195 GIEEVAELIRDKQVD 209 (287)
Q Consensus 195 Gl~~Va~llK~~qvd 209 (287)
++..+-+.||..|+.
T Consensus 135 ~i~~~Y~~Lk~~G~~ 149 (163)
T 1x5b_A 135 LISATIKSMKEEGIT 149 (163)
T ss_dssp HHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHcCCC
Confidence 456667778877753
No 43
>3rru_A TOM1L1 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, super-helical protein; 3.00A {Homo sapiens}
Probab=34.76 E-value=21 Score=29.51 Aligned_cols=27 Identities=11% Similarity=0.181 Sum_probs=17.3
Q ss_pred HHHhhc-ccccchhhhHHHHHHHHhhhc
Q 023132 201 ELIRDK-QVDENLRLRCGEFLLLLIGHV 227 (287)
Q Consensus 201 ~llK~~-qvd~~vRlKC~EFLl~yl~~~ 227 (287)
++++++ .++.+||-||.|.+.-+-...
T Consensus 105 kl~~~~~~~~~~Vk~kil~li~~Wa~~F 132 (152)
T 3rru_A 105 KLLNPRYNLPLDIQNRILNFIKTWSQGF 132 (152)
T ss_dssp GGGSGGGCCCHHHHHHHHHHHHHHHTCC
T ss_pred HHhcCCCCCcHHHHHHHHHHHHHHHHHh
Confidence 444444 466778888888777665533
No 44
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=28.18 E-value=45 Score=28.84 Aligned_cols=93 Identities=11% Similarity=0.033 Sum_probs=61.2
Q ss_pred HHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhh-cCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHHh--h
Q 023132 129 LALRVLEGCCLLHRESAILAHKHKAIKILMNILST-RGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIR--D 205 (287)
Q Consensus 129 LALrVLeGccLLh~~s~~~a~r~~AvevllniL~~-rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~llK--~ 205 (287)
.|...|.-.+.-++..|....+..||..|+++|.. ..+-.|..+.=+|..+-. +++|.+.+-+ .|+...++++- .
T Consensus 71 ~Aa~aL~nLa~~~~~nk~~I~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~-~~~~k~~i~~-~~i~~Lv~ll~~p~ 148 (233)
T 3tt9_A 71 AVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSS-NDKLKNLMIT-EALLTLTENIIIPF 148 (233)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHT-SGGGHHHHHH-HHHHHHCCCCCHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHc-ChhhHHHHHh-ccHHHHHHHHhccc
Confidence 34555555555678999999999999999999985 445566666666666644 4566666655 47777776552 2
Q ss_pred ccc------------ccchhhhHHHHHHHH
Q 023132 206 KQV------------DENLRLRCGEFLLLL 223 (287)
Q Consensus 206 ~qv------------d~~vRlKC~EFLl~y 223 (287)
.|. +.+++-+.+-.|--+
T Consensus 149 sG~~~~~~~~~~~~~~~~v~~na~~~L~nL 178 (233)
T 3tt9_A 149 SGWPEGDYPKANGLLDFDIFYNVTGCLRNM 178 (233)
T ss_dssp HCCCGGGCCCCCTTCCHHHHHHHHHHHHHH
T ss_pred cCCcccccccccccchHHHHHHHHHHHHHH
Confidence 222 446666666666433
No 45
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=28.06 E-value=1.1e+02 Score=24.75 Aligned_cols=94 Identities=12% Similarity=0.052 Sum_probs=57.7
Q ss_pred hhhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChh-hhhhhhhccHHHHHHHHhhc----ccccchhhhHHHHHHH
Q 023132 148 AHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSAN-QLDFEACNGIEEVAELIRDK----QVDENLRLRCGEFLLL 222 (287)
Q Consensus 148 a~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~N-q~dFE~~~Gl~~Va~llK~~----qvd~~vRlKC~EFLl~ 222 (287)
.+-..|++.+..-|..+.+-+|.-.|..|=+++--+... +..+-.-.=++++.++++++ +++.+||-||.|.+.-
T Consensus 34 ~~~k~a~rai~krl~~~n~~vql~AL~LLe~~vkNCG~~fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~ 113 (148)
T 1mhq_A 34 NGPTHAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFS 113 (148)
T ss_dssp HHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHH
Confidence 356677788887777777778877776666666554432 22222223355667777753 5789999999998876
Q ss_pred HhhhccCCCCCCcccHHHHHH
Q 023132 223 LIGHVNGRQLSPMATIHEDIR 243 (287)
Q Consensus 223 yl~~~~~~~~~~~a~~~ed~~ 243 (287)
+-... +. .|.+..+++.|+
T Consensus 114 W~~~f-~~-~p~i~~~y~~Lk 132 (148)
T 1mhq_A 114 WTVWF-PE-DIKIRDAYQMLK 132 (148)
T ss_dssp HHHHC-TT-CHHHHHHHHHHH
T ss_pred HHHHc-CC-CchHHHHHHHHH
Confidence 65443 22 233444444443
No 46
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=27.30 E-value=1.3e+02 Score=24.41 Aligned_cols=76 Identities=21% Similarity=0.226 Sum_probs=53.2
Q ss_pred ChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhh----c------CcchhhhHHHHHHHHHhCCChhhhhhhh
Q 023132 123 TDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILST----R------GALEQGACLDALTSLMLDSSANQLDFEA 192 (287)
Q Consensus 123 TdsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~----r------g~leq~AcLDtLl~llvDSs~Nq~dFE~ 192 (287)
+..+..+||.+|+-|.-+|- .-+|+..|-+-+||-|-. . .+..+.-+|..+-+- ...|..
T Consensus 51 n~~vql~AL~LLe~~vkNCG---~~fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W-------~~~f~~ 120 (148)
T 1mhq_A 51 QEKEALYALTVLEMCMNHCG---EKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSW-------TVWFPE 120 (148)
T ss_dssp SHHHHHHHHHHHHHHHHHSC---HHHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHH-------HHHCTT
T ss_pred CHHHHHHHHHHHHHHHHHcC---HHHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHH-------HHHcCC
Confidence 56778889999999987654 455665665666665542 1 223556677666554 446888
Q ss_pred hccHHHHHHHHhhccc
Q 023132 193 CNGIEEVAELIRDKQV 208 (287)
Q Consensus 193 ~~Gl~~Va~llK~~qv 208 (287)
.+++..+-+.||..|+
T Consensus 121 ~p~i~~~y~~Lk~~G~ 136 (148)
T 1mhq_A 121 DIKIRDAYQMLKKQGI 136 (148)
T ss_dssp CHHHHHHHHHHHHTTS
T ss_pred CchHHHHHHHHHHcCC
Confidence 8889999999999987
No 47
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=26.35 E-value=1.4e+02 Score=24.41 Aligned_cols=78 Identities=19% Similarity=0.206 Sum_probs=51.6
Q ss_pred CChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHH----HHHHHhhc-----C-cchhhhHHHHHHHHHhCCChhhhhhh
Q 023132 122 STDAEVALALRVLEGCCLLHRESAILAHKHKAIKI----LMNILSTR-----G-ALEQGACLDALTSLMLDSSANQLDFE 191 (287)
Q Consensus 122 ~TdsEiaLALrVLeGccLLh~~s~~~a~r~~Avev----llniL~~r-----g-~leq~AcLDtLl~llvDSs~Nq~dFE 191 (287)
.+..+.-+||.+|+-|.-+|- .-+|.-.|-+- |..++..+ . +..+.-+|..+-+. ...|.
T Consensus 60 ~n~~v~l~AL~LLe~cvkNCG---~~fh~eias~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W-------~~~f~ 129 (149)
T 3g2s_A 60 PQEWEAIQALTVLETCMKSCG---KRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSW-------TVGLP 129 (149)
T ss_dssp SSHHHHHHHHHHHHHHHHHCC---HHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHH-------HHHCT
T ss_pred CCHHHHHHHHHHHHHHHHhcC---HHHHHHHhhHHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHH-------HHHhC
Confidence 356778889999999987654 33444444333 44555432 2 23456666655554 44688
Q ss_pred hhccHHHHHHHHhhcccc
Q 023132 192 ACNGIEEVAELIRDKQVD 209 (287)
Q Consensus 192 ~~~Gl~~Va~llK~~qvd 209 (287)
..+++..+-+.||+.|+-
T Consensus 130 ~~p~i~~~Y~~Lk~~Giv 147 (149)
T 3g2s_A 130 EEVKIAEAYQMLKKQGIV 147 (149)
T ss_dssp TCHHHHHHHHHHHHTTCC
T ss_pred CCchHHHHHHHHHHCcCc
Confidence 889999999999998874
No 48
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=25.40 E-value=3.1e+02 Score=25.60 Aligned_cols=77 Identities=14% Similarity=0.258 Sum_probs=41.5
Q ss_pred cCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHHhhcccccchhhhHHHHHHHHhhhccCCCCCCcccHHHHHH
Q 023132 164 RGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRDKQVDENLRLRCGEFLLLLIGHVNGRQLSPMATIHEDIR 243 (287)
Q Consensus 164 rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~llK~~qvd~~vRlKC~EFLl~yl~~~~~~~~~~~a~~~ed~~ 243 (287)
+.+.....|+|+|+.++-|..++.+. .-+..+.++++. .++.|-++.+.|.-.+.+... .+.
T Consensus 383 ~~~~~~~~~v~~Ll~ll~~~~~~v~~----e~i~~l~~ii~~---~p~~~~~~v~~L~~~l~~~~~----------~~~- 444 (591)
T 2vgl_B 383 KVEQSAERCVSTLLDLIQTKVNYVVQ----EAIVVIRDIFRK---YPNKYESIIATLCENLDSLDE----------PDA- 444 (591)
T ss_dssp TCHHHHHHHHHHHHHHHHTCCHHHHH----HHHHHHHHHHHH---SCSSCCTTHHHHHHTTTTCCS----------HHH-
T ss_pred hChhHHHHHHHHHHHHHcccchHHHH----HHHHHHHHHHHH---CcchHHHHHHHHHHHHHhccC----------HHH-
Confidence 33444578899998888776554321 224455555544 344555555555433322110 111
Q ss_pred HHhchhhHHHHHHhhhhcCCC
Q 023132 244 RLLGEKSASLIWAASQFGSTL 264 (287)
Q Consensus 244 ~llGe~~asliwaa~~fgstl 264 (287)
.++.+|..++||..+
T Consensus 445 ------~~~~~wilGey~~~~ 459 (591)
T 2vgl_B 445 ------RAAMIWIVGEYAERI 459 (591)
T ss_dssp ------HHHHHHHHHTTCTTC
T ss_pred ------HHHHHHHHHcccccc
Confidence 246678888877544
No 49
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=23.39 E-value=2.4e+02 Score=22.33 Aligned_cols=94 Identities=10% Similarity=0.159 Sum_probs=48.3
Q ss_pred hhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChh-hhhhhhhccHHHHHHHHhhcccccchhhhHHHHHHHHhhhc
Q 023132 149 HKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSAN-QLDFEACNGIEEVAELIRDKQVDENLRLRCGEFLLLLIGHV 227 (287)
Q Consensus 149 ~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~N-q~dFE~~~Gl~~Va~llK~~qvd~~vRlKC~EFLl~yl~~~ 227 (287)
+-..|++.+..-|..+.+-+|.-.|..|=+++=-+... ...+-.-.=++++.++++. ++.+||-||.|.+.-+-...
T Consensus 39 ~~k~a~rai~Krl~~~n~~~ql~AL~LLe~~vkNcG~~f~~evas~~Fl~el~~l~~~--~~~~Vk~kil~li~~W~~~f 116 (140)
T 3ldz_A 39 GPKDCLRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIFHLEVCSRDFASEVSNVLNK--GHPKVCEKLKALMVEWTDEF 116 (140)
T ss_dssp HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHHHHHHHHHH--SCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHhcc--CCHHHHHHHHHHHHHHHHHh
Confidence 34566666666666666666655554443333333221 1111111223445556654 67899999999887554333
Q ss_pred cCC-CCCCcccHHHHHHH
Q 023132 228 NGR-QLSPMATIHEDIRR 244 (287)
Q Consensus 228 ~~~-~~~~~a~~~ed~~~ 244 (287)
... +.+.+..+++.+++
T Consensus 117 ~~~~~l~~i~~~Y~~Lk~ 134 (140)
T 3ldz_A 117 KNDPQLSLISAMIKNLKE 134 (140)
T ss_dssp TTCGGGTHHHHHHHHHHH
T ss_pred CCCCCchHHHHHHHHHHH
Confidence 211 12224445555553
No 50
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=22.35 E-value=1.3e+02 Score=25.80 Aligned_cols=95 Identities=11% Similarity=0.164 Sum_probs=52.6
Q ss_pred hhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChh-hhhhhhhccHHHHHHHHhhcccccchhhhHHHHHHHHhhhc
Q 023132 149 HKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSAN-QLDFEACNGIEEVAELIRDKQVDENLRLRCGEFLLLLIGHV 227 (287)
Q Consensus 149 ~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~N-q~dFE~~~Gl~~Va~llK~~qvd~~vRlKC~EFLl~yl~~~ 227 (287)
+-..|++.+..=|..+.+-+|.-.|..|=+++--+... ...+-.-.-++++.++++ ..++.+||-|+.|.+.-+--..
T Consensus 42 ~~k~a~ral~krl~~~n~~v~l~aL~LLe~~vkNcG~~f~~eias~~fl~~l~~l~~-~~~~~~Vk~kil~li~~W~~~f 120 (226)
T 3zyq_A 42 QAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLK-RQVEVNVRNKILYLIQAWAHAF 120 (226)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCHHHHHHHSSHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcchHHHHhhccHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHh
Confidence 34566777777776666667766554444443333321 222222233345566665 5789999999999887665433
Q ss_pred cCC-CCCCcccHHHHHHH
Q 023132 228 NGR-QLSPMATIHEDIRR 244 (287)
Q Consensus 228 ~~~-~~~~~a~~~ed~~~ 244 (287)
... +.+.+..+++.|++
T Consensus 121 ~~~~~l~~i~~~Y~~Lk~ 138 (226)
T 3zyq_A 121 RNEPKYKVVQDTYQIMKV 138 (226)
T ss_dssp TTCGGGHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHh
Confidence 221 12224445555554
No 51
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=22.02 E-value=4.6e+02 Score=24.01 Aligned_cols=187 Identities=17% Similarity=0.286 Sum_probs=93.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcch--hhHHHhchHHHHHHHhhhhcccc----chhhhhccCCchhhhhh
Q 023132 26 TAVGELANSLKQQRVQREITLALRTGLRDARAEF--SFLRVRGLRSLLKILRSVAESDS----TIHFFCQSQSVPELQDS 99 (287)
Q Consensus 26 ~~v~elv~sl~~qR~yRevtlaLR~gLRDA~AeF--SFlR~rglr~ll~fl~s~a~sd~----~i~LF~~sQs~~~lQ~~ 99 (287)
-=+..|..-....+++.+ --+||..||-+.-.| .|. ..|+..|+++|........ ....-.+..-+.=|. +
T Consensus 70 ~yi~~L~~~~~~~kl~~~-L~sL~v~Lrt~~~sWV~~F~-~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CLk-a 146 (383)
T 3eg5_B 70 MYIQELRSGLRDMHLLSC-LESLRVSLTSHPVSWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLK-A 146 (383)
T ss_dssp HHHHHHTTTCCHHHHHHH-HHHHHHHHHHSCHHHHHHHH-HHHHHHHHHHHHHHHTCC-------CHHHHHHHHHHHH-H
T ss_pred HHHHHHHhcccchhHHHH-HHHHHHHHhhCccHHHHHHH-HccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHH-H
Confidence 344444444445566543 347888887766555 466 7899999999976532110 000000000000000 0
Q ss_pred hccccccccccccCCC-----ccccCCCChHHHHHHHHHHhhhcccCc-c--hHHH---------hhhhHHHHHHHHHHh
Q 023132 100 VDERVTSLDHIFTVDP-----MRVTSPSTDAEVALALRVLEGCCLLHR-E--SAIL---------AHKHKAIKILMNILS 162 (287)
Q Consensus 100 ~~~~V~~l~hi~g~ep-----~kitsp~TdsEiaLALrVLeGccLLh~-~--s~~~---------a~r~~AvevllniL~ 162 (287)
=-....-++++++.+. +..-+|+...-..+|+-+|-..|+... . .+.. .+...-.+.+++.|.
T Consensus 147 lmN~~~G~~~vl~~~~~i~~l~~~L~s~~~~~~~~aleLL~~lc~~~~~~gG~~~VL~Al~~~~~~~e~~RF~~lv~~L~ 226 (383)
T 3eg5_B 147 FMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLK 226 (383)
T ss_dssp HTSSHHHHHHHHTCSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHTTS
T ss_pred HhcchhhHHHHHcChHHHHHHHHHhCCCchHHHHHHHHHHHHHHhCcCcCCcHHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 0000001111221111 111234444556678888888898875 2 1111 111112233555554
Q ss_pred hcCcc-hhhhHHHHHHHHHhCCChhhhhhhhh------ccHHHHHHHHhhcccccchhhhHH
Q 023132 163 TRGAL-EQGACLDALTSLMLDSSANQLDFEAC------NGIEEVAELIRDKQVDENLRLRCG 217 (287)
Q Consensus 163 ~rg~l-eq~AcLDtLl~llvDSs~Nq~dFE~~------~Gl~~Va~llK~~qvd~~vRlKC~ 217 (287)
..... -+.+|+ +||=.+|++++++...-.+ .|+.+|-+-+|..+ ++++.--|-
T Consensus 227 ~~~~~e~~~~~m-~lIN~li~~~~dl~~R~~lR~ef~~~Gl~~il~~lr~~~-~~~L~~Qi~ 286 (383)
T 3eg5_B 227 SGTSIALKVGCL-QLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIE-NEDMKVQLC 286 (383)
T ss_dssp TTSCHHHHHHHH-HHHHHHHTTCCCHHHHHHHHHHHHHTTHHHHHHHHTTSC-CHHHHHHHH
T ss_pred ccCcHHHHHHHH-HHHHHHHcCCCCHHHHHHHHHHHHHCChHHHHHHHhcCC-ChhHHHHHH
Confidence 33222 224444 6777889999887654443 49999999888754 555554333
No 52
>1yx4_A 26S proteasome non-ATPase regulatory subunit 4; polyubiquitin, UIM, hydrolase; NMR {Homo sapiens} PDB: 1yx5_A 1yx6_A 2kde_A 2kdf_A
Probab=21.00 E-value=35 Score=28.71 Aligned_cols=15 Identities=67% Similarity=0.891 Sum_probs=13.2
Q ss_pred CCCChHHHHHHHHHH
Q 023132 120 SPSTDAEVALALRVL 134 (287)
Q Consensus 120 sp~TdsEiaLALrVL 134 (287)
.|..|-|+++||||=
T Consensus 35 Dp~~DPeLa~ALr~S 49 (132)
T 1yx4_A 35 DPSADPELALALRVS 49 (132)
T ss_dssp CGGGCHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHh
Confidence 478999999999993
No 53
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=20.61 E-value=2.9e+02 Score=21.16 Aligned_cols=56 Identities=16% Similarity=0.248 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHHhhcccccchhhhHHHHH
Q 023132 152 KAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRDKQVDENLRLRCGEFL 220 (287)
Q Consensus 152 ~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~llK~~qvd~~vRlKC~EFL 220 (287)
.+++.+++.|....+..+..++.+|-.+ ..-+++..+.+.+++. +..+|..+.+-|
T Consensus 19 ~~~~~L~~~L~~~~~~vR~~A~~~L~~~-----------~~~~~~~~L~~~l~~~--~~~vr~~a~~aL 74 (211)
T 3ltm_A 19 EKVEMYIKNLQDDSYYVRRAAAYALGKI-----------GDERAVEPLIKALKDE--DAWVRRAAADAL 74 (211)
T ss_dssp GGHHHHHHHTTCSSHHHHHHHHHHHHHH-----------CCGGGHHHHHHHTTCS--CHHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHHh-----------CCccHHHHHHHHHcCC--CHHHHHHHHHHH
Confidence 3455555555544444444444444321 1124455555555543 455665555544
No 54
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=20.52 E-value=3.3e+02 Score=21.73 Aligned_cols=108 Identities=14% Similarity=0.141 Sum_probs=57.1
Q ss_pred HHHHHHHhhhcccCcchHHHhhhhH--HHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhhhhhhhccHHHHHHHHhh
Q 023132 128 ALALRVLEGCCLLHRESAILAHKHK--AIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRD 205 (287)
Q Consensus 128 aLALrVLeGccLLh~~s~~~a~r~~--AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~dFE~~~Gl~~Va~llK~ 205 (287)
..|+..|...+- ........|. -+..+++.|....+..+.++..+|-+++-..+ ++.+ ++.+...+++
T Consensus 75 ~~a~~~l~~la~---~l~~~~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~-----~~~l--l~~l~~~l~~ 144 (242)
T 2qk2_A 75 AMAGKCLALLAK---GLAKRFSNYASACVPSLLEKFKEKKPNVVTALREAIDAIYASTS-----LEAQ--QESIVESLSN 144 (242)
T ss_dssp HHHHHHHHHHHH---HHGGGGHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSC-----HHHH--HHHHHHHTTC
T ss_pred HHHHHHHHHHHH---HHhhhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCC-----HHHH--HHHHHHHHcC
Confidence 356666666652 1111222221 22333444444445667777777777654332 2221 4456666776
Q ss_pred cccccchhhhHHHHHHHHhhhccCCC--CCCcccHHHHHHHHhc
Q 023132 206 KQVDENLRLRCGEFLLLLIGHVNGRQ--LSPMATIHEDIRRLLG 247 (287)
Q Consensus 206 ~qvd~~vRlKC~EFLl~yl~~~~~~~--~~~~a~~~ed~~~llG 247 (287)
+ ...+|..+..||--.+....+.. .+.+..+-.-+..+++
T Consensus 145 ~--~~~vr~~~l~~l~~~l~~~~~~~~~~~~l~~l~p~l~~~l~ 186 (242)
T 2qk2_A 145 K--NPSVKSETALFIARALTRTQPTALNKKLLKLLTTSLVKTLN 186 (242)
T ss_dssp S--CHHHHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHT
T ss_pred C--ChHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHhc
Confidence 5 56899999999998877654431 1222234444555553
No 55
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=20.51 E-value=38 Score=27.45 Aligned_cols=46 Identities=24% Similarity=0.307 Sum_probs=31.4
Q ss_pred CCCChHHHHHHHHHHhhhcccCcchHHHhhhhHHHHHHHHHHhhcCcchhhhHH
Q 023132 120 SPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACL 173 (287)
Q Consensus 120 sp~TdsEiaLALrVLeGccLLh~~s~~~a~r~~AvevllniL~~rg~leq~AcL 173 (287)
+|+.|+..-+| +||+| |+...+...+|.+|.+++-...|..+.-||
T Consensus 32 ~~s~~~~F~yA------w~Lv~--S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~l 77 (126)
T 1nzn_A 32 SVSKSTQFEYA------WCLVR--TRYNDDIRKGIVLLEELLPKGSKEEQRDYV 77 (126)
T ss_dssp CCCHHHHHHHH------HHHTT--SSSHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCcHHHHHHHH------HHHHc--CCCHHHHHHHHHHHHHHHhcCCcchHHHHH
Confidence 35666655554 68898 555667788999999988875454555554
No 56
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=20.47 E-value=2.5e+02 Score=22.95 Aligned_cols=76 Identities=9% Similarity=0.071 Sum_probs=44.5
Q ss_pred hhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChhhh-hhhhhccHHHHHHHHhhcccccchhhhHHHHHHHHhh
Q 023132 149 HKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQL-DFEACNGIEEVAELIRDKQVDENLRLRCGEFLLLLIG 225 (287)
Q Consensus 149 ~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~Nq~-dFE~~~Gl~~Va~llK~~qvd~~vRlKC~EFLl~yl~ 225 (287)
+-+.|++.+..-|..+.+-+|.-.|..|=+++--+...-. .+-.-.=++++.++++ ...+.+||-||.|.+.-+--
T Consensus 49 ~~keA~ral~krl~~~n~~vql~AL~LLd~~vkNcG~~Fh~evas~~Fl~el~~l~~-~~~~~~Vk~kil~li~~W~~ 125 (163)
T 1x5b_A 49 GAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIK-NKAHPKVCEKLKSLMVEWSE 125 (163)
T ss_dssp HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHTCHHHHHHHTSHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHc-cCCCHHHHHHHHHHHHHHHH
Confidence 4567777777777766677776666555444443322111 1111111344556666 45788999999997765543
No 57
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=20.08 E-value=2.1e+02 Score=23.66 Aligned_cols=93 Identities=12% Similarity=0.165 Sum_probs=53.7
Q ss_pred hhhHHHHHHHHHHhhcCcchhhhHHHHHHHHHhCCChh-hhhhhhhccHHHHHHHHhh----cccccchhhhHHHHHHHH
Q 023132 149 HKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSAN-QLDFEACNGIEEVAELIRD----KQVDENLRLRCGEFLLLL 223 (287)
Q Consensus 149 ~r~~AvevllniL~~rg~leq~AcLDtLl~llvDSs~N-q~dFE~~~Gl~~Va~llK~----~qvd~~vRlKC~EFLl~y 223 (287)
+-+.|++.+..-|..+.+-+|.-.|..|=+++--+... ...+-.-.=++++.++++. .+++.+||-||.|.+.-+
T Consensus 47 ~~k~A~ral~krl~~~n~~vql~AL~LLd~~vkNCG~~Fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W 126 (171)
T 1juq_A 47 GPQIAVRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSW 126 (171)
T ss_dssp HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHH
Confidence 45667777777777666777766665555544433221 1111111224566677764 468899999999998876
Q ss_pred hhhccCCCCCCcccHHHHHH
Q 023132 224 IGHVNGRQLSPMATIHEDIR 243 (287)
Q Consensus 224 l~~~~~~~~~~~a~~~ed~~ 243 (287)
-... +. .|.+..+++.|+
T Consensus 127 ~~~f-~~-~~~i~~~y~~Lk 144 (171)
T 1juq_A 127 TMAL-PE-EAKIKDAYHMLK 144 (171)
T ss_dssp HHHC-TT-CHHHHHHHHHHH
T ss_pred HHHc-CC-CcHHHHHHHHHH
Confidence 5543 22 233444444444
No 58
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=20.07 E-value=3.3e+02 Score=25.75 Aligned_cols=35 Identities=17% Similarity=0.332 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhhhhhhhcchhhHHHhchHHHHHHHhh
Q 023132 39 RVQREITLALRTGLRDARAEFSFLRVRGLRSLLKILRS 76 (287)
Q Consensus 39 R~yRevtlaLR~gLRDA~AeFSFlR~rglr~ll~fl~s 76 (287)
.+-+.+...+...|+|- =.|+|-..+-++.+..+.
T Consensus 138 ~~~~~l~~~l~~~L~~~---~~~VRk~A~~al~~l~~~ 172 (618)
T 1w63_A 138 EMCRDLAGEVEKLLKTS---NSYLRKKAALCAVHVIRK 172 (618)
T ss_dssp HHHHHHHHHHHHHHHSC---CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHH
Confidence 46677778888888873 368888888888887664
Done!